HHsearch alignment for GI: 254780893 and conserved domain: PRK10046
>PRK10046 dpiA two-component response regulator DpiA; Provisional.
Probab=99.96 E-value=4e-29 Score=195.75 Aligned_cols=176 Identities=18% Similarity=0.209 Sum_probs=134.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHH-CCCE-EEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 9599986998999999999998-8989-9999998999999985799478831149874334311122223223310013
Q gi|254780893|r 1 MRILLIEDDKALAHSIELMLKS-ENFN-VYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCIL 78 (236)
Q Consensus 1 mkILivedd~~~~~~l~~~L~~-~g~~-v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~l 78 (236)
T Consensus 5 i~VLIVEDd~~v~~~l~~~L~~~~gf~~V~~A~~~~eA~~~l~~~~pDLvLLDi~LPd~~Glell~~lr~~~~~~~VI~i 84 (225)
T PRK10046 5 LTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFT 84 (225)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 86999959899999999999728995499998999999999973599999982898999799999999964879988999
Q ss_pred CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCC
Q ss_conf 33210000011232210111223322211111222222222222-2222222222222----222222333332224641
Q gi|254780893|r 79 SGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGH-AQSLIVTGDLSVN----LDAKTVEVQGHRIHLTGK 153 (236)
Q Consensus 79 s~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~-~~~~~~~g~~~~d----~~~~~v~~~g~~i~LT~~ 153 (236)
T Consensus 85 TA~~d~~~~~~Al~~Ga~DYLvKPf~~erl~~~L~~y~~~~~~l~~~~~~--~Q~~iD~~~~~~~~~~~~~~lpKGl~~~ 162 (225)
T PRK10046 85 TAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLTRFRQRKHMLESIDSA--SQKQIDEMFNAYARGEPKDELPTGIDPL 162 (225)
T ss_pred ECCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCC--CHHHHHHHHCCCCCCCCCCCCCCCCCHH
T ss_conf 68999999999997499831028999999999999999999986357768--9999999962335688856589999989
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 1688999871899737899999987
Q gi|254780893|r 154 EYQMIELLSLRKNTTLTKEMFLNHL 178 (236)
Q Consensus 154 E~~lL~~L~~~~g~vvsr~~i~~~v 178 (236)
T Consensus 163 Tl~~v~~~l~~~~~~~ta~eva~~~ 187 (225)
T PRK10046 163 TLNAVRKLFKEPGVQHTAETVAQAL 187 (225)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 9999999997179986899999985