HHsearch alignment for GI: 254780893 and conserved domain: PRK10161

>PRK10161 transcriptional regulator PhoB; Provisional.
Probab=100.00  E-value=0  Score=414.60  Aligned_cols=222  Identities=29%  Similarity=0.479  Sum_probs=209.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC--CCCCEECC
Q ss_conf             9599986998999999999998898999999989999999857994788311498743343111222232--23310013
Q gi|254780893|r    1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAK--ISTPVCIL   78 (236)
Q Consensus         1 mkILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~--~~~pII~l   78 (236)
T Consensus         3 ~kILiVEDd~~l~~~l~~~L~~~g~~v~~a~~g~~a~~~l~~~~~DliilDi~lP~~dG~~~~~~ir~~~~~~~~PII~l   82 (229)
T PRK10161          3 RRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVML   82 (229)
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf             71999959999999999999977999999899999999985289989999789988763358788775024689758999


Q ss_pred             CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             33210000011232210111223322211111222222222222-22222222222222222223333322246411688
Q gi|254780893|r   79 SGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGH-AQSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQM  157 (236)
Q Consensus        79 s~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~-~~~~~~~g~~~~d~~~~~v~~~g~~i~LT~~E~~l  157 (236)
T Consensus        83 ta~~~~~d~v~gl~~GADDYl~KPf~~~EL~aRi~a~lrR~~~~~~~~~~~~~~l~~d~~~~~v~~~~~~i~LT~~E~~L  162 (229)
T PRK10161         83 TARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKL  162 (229)
T ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEEEEEEEECCEEEECCHHHHHH
T ss_conf             55666577999987698765208999899999999997123777765432677789861015999999998706899999


Q ss_pred             HHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECC
Q ss_conf             999871899737899999987188777775303667899988511067888438888782026456
Q gi|254780893|r  158 IELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLRE  223 (236)
Q Consensus       158 L~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~GY~l~~  223 (236)
T Consensus       163 L~~L~~~~g~vvsr~~L~~~vwg~~~~~~~rtldv~I~rLRkKl~~~-~~~~~I~TvrG~GYr~~~  227 (229)
T PRK10161        163 LHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPG-GHDRMVQTVRGTGYRFST  227 (229)
T ss_pred             HHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCEEEECCCCEEECC
T ss_conf             99999779987979999998639998988473999999999974567-999819986584740571