HHsearch alignment for GI: 254780893 and conserved domain: PRK10188
>PRK10188 DNA-binding transcriptional activator SdiA; Provisional.
Probab=95.94 E-value=0.012 Score=36.40 Aligned_cols=48 Identities=10% Similarity=0.186 Sum_probs=42.3
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 222464116889998718997378999999871887777753036678999885110
Q gi|254780893|r 147 RIHLTGKEYQMIELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSN 203 (236)
Q Consensus 147 ~i~LT~~E~~lL~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~ 203 (236)
T Consensus 177 ~~~LT~RE~E~L~W~A~--GK--Ts~EIa~IL-----~ISe~TV~fHl~na~~KL~a 224 (240)
T PRK10188 177 EMNFSKREKEILKWTAE--GK--TSAEIAMIL-----SISENTVNFHQKNMQKKFNA 224 (240)
T ss_pred CCCCCHHHHHHHHHHHC--CC--CHHHHHHHH-----CCCHHHHHHHHHHHHHHHCC
T ss_conf 78899899999999977--99--999999883-----99999999999999999589