HHsearch alignment for GI: 254780893 and conserved domain: PRK10188

>PRK10188 DNA-binding transcriptional activator SdiA; Provisional.
Probab=95.94  E-value=0.012  Score=36.40  Aligned_cols=48  Identities=10%  Similarity=0.186  Sum_probs=42.3

Q ss_pred             CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             222464116889998718997378999999871887777753036678999885110
Q gi|254780893|r  147 RIHLTGKEYQMIELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSN  203 (236)
Q Consensus       147 ~i~LT~~E~~lL~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~  203 (236)
T Consensus       177 ~~~LT~RE~E~L~W~A~--GK--Ts~EIa~IL-----~ISe~TV~fHl~na~~KL~a  224 (240)
T PRK10188        177 EMNFSKREKEILKWTAE--GK--TSAEIAMIL-----SISENTVNFHQKNMQKKFNA  224 (240)
T ss_pred             CCCCCHHHHHHHHHHHC--CC--CHHHHHHHH-----CCCHHHHHHHHHHHHHHHCC
T ss_conf             78899899999999977--99--999999883-----99999999999999999589