HHsearch alignment for GI: 254780893 and conserved domain: PRK10529

>PRK10529 DNA-binding transcriptional activator KdpE; Provisional.
Probab=100.00  E-value=0  Score=414.52  Aligned_cols=222  Identities=30%  Similarity=0.490  Sum_probs=211.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf             95999869989999999999988989999999899999998579947883114987433431112222322331001333
Q gi|254780893|r    1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILSG   80 (236)
Q Consensus         1 mkILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls~   80 (236)
T Consensus         2 ~~ILivEDd~~l~~~l~~~L~~~g~~V~~a~~~~~al~~~~~~~~DlviLDi~lP~~dG~~l~~~iR~~~-~~pII~lta   80 (225)
T PRK10529          2 TNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWS-AIPVIVLSA   80 (225)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCC-CCCEEEEEC
T ss_conf             9899997989999999999998899999979999999986117998999807888888763310001279-987899954


Q ss_pred             CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             210000011232210111223322211111222222222222--222222222222222222233333222464116889
Q gi|254780893|r   81 MSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGH--AQSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQMI  158 (236)
Q Consensus        81 ~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~--~~~~~~~g~~~~d~~~~~v~~~g~~i~LT~~E~~lL  158 (236)
T Consensus        81 ~~~~~d~i~~l~~GADDYl~KPf~~~eL~aRi~a~lrr~~~~~~~~~~~~~~~l~~d~~~~~v~~~g~~i~LT~~E~~lL  160 (225)
T PRK10529         81 RSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATPAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLL  160 (225)
T ss_pred             CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCCCEEEECCCCCCCCHHHHHHH
T ss_conf             68989999999769876540785459999999999714037888786499999999903399999996131366899999


Q ss_pred             HHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECC
Q ss_conf             99871899737899999987188777775303667899988511067888438888782026456
Q gi|254780893|r  159 ELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLRE  223 (236)
Q Consensus       159 ~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~GY~l~~  223 (236)
T Consensus       161 ~~L~~~~g~vvsre~L~~~vw~~~~~~~~~~idv~I~rLRkKl~~~~~~~~~I~TvrG~GYr~~P  225 (225)
T PRK10529        161 AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPTRPRHFITETGIGYRFMP  225 (225)
T ss_pred             HHHHHCCCCEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECC
T ss_conf             99997799619699999996499989886879999999999720078999828956781656659