HHsearch alignment for GI: 254780893 and conserved domain: PRK10643
>PRK10643 DNA-binding transcriptional regulator BasR; Provisional.
Probab=100.00 E-value=0 Score=404.83 Aligned_cols=220 Identities=35% Similarity=0.607 Sum_probs=212.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 95999869989999999999988989999999899999998579947883114987433431112222322331001333
Q gi|254780893|r 1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILSG 80 (236)
Q Consensus 1 mkILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls~ 80 (236)
T Consensus 1 mkILlVEDd~~~~~~l~~~L~~~g~~V~~a~~~~ea~~~~~~~~~DlvilDi~lp~~~G~~l~~~ir~~~~~~pII~lt~ 80 (222)
T PRK10643 1 MKILIVEDDTLLLQGLILAAQTEGYACDGVSTAREAEQSLESGHYSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILTA 80 (222)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEC
T ss_conf 97999928899999999999978999999899999999997489989999688899862268999983489988999821
Q ss_pred CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 21000001123221011122332221111122222222222222222222222222222223333322246411688999
Q gi|254780893|r 81 MSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGHAQSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQMIEL 160 (236)
Q Consensus 81 ~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~~~~~~~~g~~~~d~~~~~v~~~g~~i~LT~~E~~lL~~ 160 (236)
T Consensus 81 ~~~~~~~~~~l~~GAddyi~KP~~~~eL~ari~~~lrr~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~LT~~E~~lL~~ 160 (222)
T PRK10643 81 RDTLEDRIAGLDVGADDYLVKPFALEELHARIRALLRRHNNQGESELQVGNLTLNLGRQQVWLDGQELILTPKEYALLSR 160 (222)
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEECCEEECCCCCEEEECCEEEEECHHHHHHHHH
T ss_conf 03678899999759977643887689999999999703236677732677689810006898899888708799999999
Q ss_pred HHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCC
Q ss_conf 87189973789999998718877777530366789998851106788843888878202645688
Q gi|254780893|r 161 LSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLRENA 225 (236)
Q Consensus 161 L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~GY~l~~~~ 225 (236)
T Consensus 161 L~~~~g~vvsre~L~~~v~~~~~~~~~~~ld~~I~rLRkKl~~-----~~I~tvrG~GY~l~~~~ 220 (222)
T PRK10643 161 LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGK-----DRIRTVRGFGYMLVANE 220 (222)
T ss_pred HHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC-----CCEEEECCCCEEEEECC
T ss_conf 9967999868999999960878888867699999999976699-----85797677376980178