HHsearch alignment for GI: 254780893 and conserved domain: PRK10693

>PRK10693 response regulator of RpoS; Provisional.
Probab=99.96  E-value=3.3e-30  Score=202.28  Aligned_cols=116  Identities=23%  Similarity=0.383  Sum_probs=110.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
Q ss_conf             59998699899999999999889899999998999999985799478831149874334311122223223310013332
Q gi|254780893|r    2 RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILSGM   81 (236)
Q Consensus         2 kILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls~~   81 (236)
T Consensus         9 kILIVDDd~~~r~~l~~~L~~~G~~V~~A~nG~eAl~~l~~~~pDLIi~Dl~MP~mdGlell~~lr~~~~~~PVIvlTa~   88 (337)
T PRK10693          9 QILIVEDEPVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKFVEHLRNRGDQTPVLVISAT   88 (337)
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             89999499999999999999789999998999999999865899999996899999989999999985899649999868


Q ss_pred             CCHHCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf             1000001123221011122332-22111112222222
Q gi|254780893|r   82 SSIEDKVRGLQSGADDYISKPF-NKEELVARIRAIVR  117 (236)
Q Consensus        82 ~~~~~~~~al~~GAddyi~KP~-~~~eL~ari~~llr  117 (236)
T Consensus        89 ~~~~d~v~al~~GA~DyL~KPI~d~~~Lr~~v~a~l~  125 (337)
T PRK10693         89 ENMADIAKALRLGVEDVLLKPVKDLNRLREAVFACLY  125 (337)
T ss_pred             CCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
T ss_conf             9999999999749958997896999999999998751