HHsearch alignment for GI: 254780893 and conserved domain: PRK10701
>PRK10701 DNA-binding transcriptional regulator RstA; Provisional.
Probab=100.00 E-value=0 Score=421.80 Aligned_cols=226 Identities=26% Similarity=0.378 Sum_probs=213.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 95999869989999999999988989999999899999998579947883114987433431112222322331001333
Q gi|254780893|r 1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILSG 80 (236)
Q Consensus 1 mkILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls~ 80 (236)
T Consensus 2 ~kILlVEDd~~l~~~l~~~L~~~g~~v~~a~~g~~a~~~~~~~~~DlvilDi~LP~~dG~~l~~~iR~~~-~~PiI~lta 80 (240)
T PRK10701 2 NTIVFVEDDAEVGSLIAAYLAKHDIDVTVEPRGDRAEETILREQPDLVLLDIMLPGKDGMTICRDLRPKW-SGPIVLLTS 80 (240)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCC-CCCEEEEEE
T ss_conf 9899997999999999999988799999989999999998617999999928997678878763110258-987899940
Q ss_pred CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------------CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2100000112322101112233222111112222222222222------------2222222222222222223333322
Q gi|254780893|r 81 MSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGHA------------QSLIVTGDLSVNLDAKTVEVQGHRI 148 (236)
Q Consensus 81 ~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~~------------~~~~~~g~~~~d~~~~~v~~~g~~i 148 (236)
T Consensus 81 ~~~~~d~v~gl~~GADDYl~KPf~~~eL~aRi~a~lrr~~~~~~~~~~~~~~~~~~~~~~~g~l~ld~~~~~v~~~g~~i 160 (240)
T PRK10701 81 LDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQATQAKGLQETSLTPYKALHFGTLTIDPINRVVTLAGEEI 160 (240)
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCEEE
T ss_conf 57578899999768877641799879999999999965325444322234555766438987799988889999999998
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCC
Q ss_conf 2464116889998718997378999999871887777753036678999885110678884388887820264568875
Q gi|254780893|r 149 HLTGKEYQMIELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLRENAKD 227 (236)
Q Consensus 149 ~LT~~E~~lL~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~GY~l~~~~~~ 227 (236)
T Consensus 161 ~LT~~E~~lL~~L~~~~g~vvsre~L~~~vwg~~~~~~~rtvdv~I~rLRkKl~~~~~~~~~I~TvrG~GY~f~p~a~~ 239 (240)
T PRK10701 161 SLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPHAWE 239 (240)
T ss_pred ECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCCC
T ss_conf 7678999999999977998738999999853988788867899999999998752889998399981818518577557