HHsearch alignment for GI: 254780893 and conserved domain: PRK10841

>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.

Probab=99.93  E-value=7e-27  Score=182.23  Aligned_cols=118  Identities=21%  Similarity=0.368  Sum_probs=110.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf             95999869989999999999988989999999899999998579947883114987433431112222322331001333
Q gi|254780893|r    1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILSG   80 (236)
Q Consensus         1 mkILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls~   80 (236)
T Consensus       825 lrILVVEDNpINq~VL~~~L~~LG~~V~~A~NG~EALe~l~~~~fDLILMDIqMPvMDGyEaTr~IRe~~~~iPIIALTA  904 (947)
T PRK10841        825 MMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTA  904 (947)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEC
T ss_conf             88999907899999999999976999999899999999975699898997088899809999999980898494999938


Q ss_pred             CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             21000001123221011122332221111122222222
Q gi|254780893|r   81 MSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRR  118 (236)
Q Consensus        81 ~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr  118 (236)
T Consensus       905 nA~~edkerCleAGMDdyLsKPV~l~~L~~vL~~Y~~~  942 (947)
T PRK10841        905 NALAEEKQRCLEAGMDSCLSKPVTLDVLKQTLTVYAER  942 (947)
T ss_pred             CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             99989999999879999997989799999999999877