HHsearch alignment for GI: 254780893 and conserved domain: PRK11014
>PRK11014 transcriptional repressor NsrR; Provisional.
Probab=91.72 E-value=0.41 Score=27.10 Aligned_cols=59 Identities=14% Similarity=0.176 Sum_probs=39.1
Q ss_pred HHHHHHHHC-CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC--EEEECCCCCC
Q ss_conf 889998718-99737899999987188777775303667899988511067888438888782--0264568875
Q gi|254780893|r 156 QMIELLSLR-KNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGR--GYVLRENAKD 227 (236)
Q Consensus 156 ~lL~~L~~~-~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~--GY~l~~~~~~ 227 (236)
T Consensus 12 raL~~LA~~~~~~~~~~~eIae~~-----~Ip~~~L~KIl~~L~~a--------Glv~S~RG~~GGy~Lar~p~~ 73 (141)
T PRK11014 12 RALIYMASLPEGRMTSISEVTEVY-----GVSRNHMVKIINQLSRA--------GYVTAVRGKNGGIRLGKPAST 73 (141)
T ss_pred HHHHHHHHCCCCCEECHHHHHHHH-----CCCHHHHHHHHHHHHHC--------CCEEECCCCCCCEECCCCHHH
T ss_conf 999999839999847499999987-----94999999999999887--------956720479988321489887