HHsearch alignment for GI: 254780893 and conserved domain: PRK11014

>PRK11014 transcriptional repressor NsrR; Provisional.
Probab=91.72  E-value=0.41  Score=27.10  Aligned_cols=59  Identities=14%  Similarity=0.176  Sum_probs=39.1

Q ss_pred             HHHHHHHHC-CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC--EEEECCCCCC
Q ss_conf             889998718-99737899999987188777775303667899988511067888438888782--0264568875
Q gi|254780893|r  156 QMIELLSLR-KNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGR--GYVLRENAKD  227 (236)
Q Consensus       156 ~lL~~L~~~-~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~--GY~l~~~~~~  227 (236)
T Consensus        12 raL~~LA~~~~~~~~~~~eIae~~-----~Ip~~~L~KIl~~L~~a--------Glv~S~RG~~GGy~Lar~p~~   73 (141)
T PRK11014         12 RALIYMASLPEGRMTSISEVTEVY-----GVSRNHMVKIINQLSRA--------GYVTAVRGKNGGIRLGKPAST   73 (141)
T ss_pred             HHHHHHHHCCCCCEECHHHHHHHH-----CCCHHHHHHHHHHHHHC--------CCEEECCCCCCCEECCCCHHH
T ss_conf             999999839999847499999987-----94999999999999887--------956720479988321489887