HHsearch alignment for GI: 254780893 and conserved domain: PRK11107
>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=99.94 E-value=2.2e-26 Score=179.29 Aligned_cols=116 Identities=23% Similarity=0.420 Sum_probs=108.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC--CCCCCEECC
Q ss_conf 959998699899999999999889899999998999999985799478831149874334311122223--223310013
Q gi|254780893|r 1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVA--KISTPVCIL 78 (236)
Q Consensus 1 mkILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~--~~~~pII~l 78 (236)
T Consensus 669 lrVLvVEDN~iN~~vi~~lL~~lG~~v~~A~nG~eAle~~~~~~fDLILMDiqMP~MDG~eATr~IR~~~~~~~~PIIAl 748 (920)
T PRK11107 669 LTVMAVDDNPANLKLIGALLEEQVEHVVLCDSGHQAVELAKQRPFDLIFMDIQMPGMDGIRACELIRQLPHNQNTPIIAV 748 (920)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 74999848899999999999984988999899999999974799978998899999989999999981867898959999
Q ss_pred CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33210000011232210111223322211111222222
Q gi|254780893|r 79 SGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIV 116 (236)
Q Consensus 79 s~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~ll 116 (236)
T Consensus 749 TA~a~~~dre~cl~aGMddyLtKPI~~~~L~~~L~~~~ 786 (920)
T PRK11107 749 TAHAMAGERERLLGAGMDDYLAKPIDEAALKQVLLRWK 786 (920)
T ss_pred ECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHC
T ss_conf 79989899999997799938728799999999999867