HHsearch alignment for GI: 254780893 and conserved domain: PRK11840

Probab=92.74  E-value=0.35  Score=27.51  Aligned_cols=83  Identities=19%  Similarity=0.239  Sum_probs=61.6

Q ss_pred             HHHHHHHHCCCEEE--EECCHHHHHHHHHHCCCCEEEECCCCCCCCCC-----CCCCCCCCCCCCCCEECCCCCCCHHCC
Q ss_conf             99999998898999--99998999999985799478831149874334-----311122223223310013332100000
Q gi|254780893|r   15 SIELMLKSENFNVY--VTDLGEDGIELCKFYEFDAIILDLGLTDIPGF-----EVLRALRVAKISTPVCILSGMSSIEDK   87 (236)
Q Consensus        15 ~l~~~L~~~g~~v~--~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~-----~~~~~ir~~~~~~pII~ls~~~~~~~~   87 (236)
T Consensus       189 ~Aae~Lv~eGF~VlpY~~dDpv~akrLed~Gc--~avMPlgsPIGSg~Gi~n~~~i~~i~e-~~~vpvivDAGiG~pS~A  265 (327)
T PRK11840        189 KAAEVLVKEGFQVMVYCSDDPIAAKRLEDAGA--VAVMPLGAPIGSGLGIQNPYTIRLIVE-GAKVPVLVDAGVGTASDA  265 (327)
T ss_pred             HHHHHHHHCCCEEEEEECCCHHHHHHHHHCCC--EEEEECCCCCCCCCCCCCHHHHHHHHH-HCCCCEEEECCCCCHHHH
T ss_conf             99999997898898871698689999987598--388622452347888689999999997-369978995798987899


Q ss_pred             CCCCCCCCCCCCC
Q ss_conf             1123221011122
Q gi|254780893|r   88 VRGLQSGADDYIS  100 (236)
Q Consensus        88 ~~al~~GAddyi~  100 (236)
T Consensus       266 ~~aMElG~daVL~  278 (327)
T PRK11840        266 AVAMELGCDGVLM  278 (327)
T ss_pred             HHHHHCCCCEEEH
T ss_conf             9998636666663