HHsearch alignment for GI: 254780893 and conserved domain: PRK11906
>PRK11906 transcriptional regulator; Provisional.
Probab=99.24 E-value=2.4e-11 Score=88.68 Aligned_cols=85 Identities=16% Similarity=0.274 Sum_probs=74.1
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCE
Q ss_conf 22233333222464116889998718997378999999871887777753036678999885110678884388887820
Q gi|254780893|r 139 KTVEVQGHRIHLTGKEYQMIELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRG 218 (236)
Q Consensus 139 ~~v~~~g~~i~LT~~E~~lL~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~G 218 (236)
T Consensus 21 giL~~~nk~v~IPpKElgVLilLLesAGelVsKd~iid~VW~~~~VseE-SLTRCIYaLRril~e~-k~~RyIeTvYgkG 98 (458)
T PRK11906 21 GILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE-SLTRCIYSLRCIFEKI-GYDRCIETIYRKG 98 (458)
T ss_pred EEEECCCCEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCC-HHHHHHHHHHHHHHHH-CCCCEEEEHHCCC
T ss_conf 0566257466018688878998875267166098899985257755731-3889999999998650-5661552200475
Q ss_pred EEECCCC
Q ss_conf 2645688
Q gi|254780893|r 219 YVLRENA 225 (236)
Q Consensus 219 Y~l~~~~ 225 (236)
T Consensus 99 YRFs~pV 105 (458)
T PRK11906 99 YRFSGQV 105 (458)
T ss_pred EEEECCE
T ss_conf 2650224