HHsearch alignment for GI: 254780893 and conserved domain: PRK13435

>PRK13435 response regulator; Provisional.
Probab=99.93  E-value=2.7e-26  Score=178.67  Aligned_cols=126  Identities=23%  Similarity=0.373  Sum_probs=108.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHHHCCCCEEEECCCCCC-CCCCCCCCCCCCCCCCCCEECC
Q ss_conf             9599986998999999999998898999-9999899999998579947883114987-4334311122223223310013
Q gi|254780893|r    1 MRILLIEDDKALAHSIELMLKSENFNVY-VTDLGEDGIELCKFYEFDAIILDLGLTD-IPGFEVLRALRVAKISTPVCIL   78 (236)
Q Consensus         1 mkILivedd~~~~~~l~~~L~~~g~~v~-~a~~~~eal~~~~~~~~DlvIlD~~lp~-~~G~~~~~~ir~~~~~~pII~l   78 (236)
T Consensus         2 mRILIVEDe~~i~~~l~~~L~~~G~~vv~~A~~~~eAl~~~~~~~PDlvllDi~LpdG~~G~e~~r~l~~-~~~ipvI~l   80 (141)
T PRK13435          2 LRVLIVEDEALIALELEKLLEEAGHQVVGIASTSEQALALGRRAQPDVALVDIRLADGPTGVEVARRLSI-DGGVEVIFM   80 (141)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHH-CCCCCEEEE
T ss_conf             7899989989999999999998799799975999999999765999899978878999989999999987-599838999


Q ss_pred             CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf             33210000011232210111223322211111222222222-22222222222
Q gi|254780893|r   79 SGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRS-RGHAQSLIVTG  130 (236)
Q Consensus        79 s~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~-~~~~~~~~~~g  130 (236)
T Consensus        81 Ta~~d---~~~~~~aGA~dyl~KPf~~~eL~~ai~~~~~rr~~~~a~~p~p~g  130 (141)
T PRK13435         81 TANPE---RVGHDFAGALGVIAKPYSLRQVARALSYVAARRVDDDASGPTPFG  130 (141)
T ss_pred             ECCHH---HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             77799---860134599858989999899999999999715689999999985