HHsearch alignment for GI: 254780893 and conserved domain: PRK13837

>PRK13837 two-component VirA-like sensor kinase; Provisional.
Probab=99.74  E-value=3.9e-18  Score=129.58  Aligned_cols=119  Identities=20%  Similarity=0.239  Sum_probs=106.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC--CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf             599986998999999999998898999999989999999857--994788311498743343111222232233100133
Q gi|254780893|r    2 RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFY--EFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILS   79 (236)
Q Consensus         2 kILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~--~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls   79 (236)
T Consensus       701 ~ILvVdDe~~vr~~~~~~L~~lGY~v~~a~~~~~Al~~~~~~~~~~DLvltD-~~p~~~g~~~~~~l~~~~p~lpVil-s  778 (831)
T PRK13837        701 TVLLVEPDDALLERYEEKLAALGYEPVGFSTLSAAIAWISKDGKRFDLVLVD-QPSLGDSQLAIAALHAAAPTLPIIL-A  778 (831)
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEEEC-CCCCCCHHHHHHHHHHHCCCCEEEE-E
T ss_conf             7999859889999999999967996888689999999998389985399988-9999987999999986189974999-7


Q ss_pred             CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             3210000011232210111223322211111222222222222
Q gi|254780893|r   80 GMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGH  122 (236)
Q Consensus        80 ~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~  122 (236)
T Consensus       779 g~~~~~~~~~~~~~~~~~fL~KPfs~~~LA~avR~aL~~~r~~  821 (831)
T PRK13837        779 GSSLKMAAREALATAIAEILPKPISSRTLAYALRTALATARAA  821 (831)
T ss_pred             CCCCHHHHHCHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCC
T ss_conf             6881443311022266706509999999999999998488887