HHsearch alignment for GI: 254780893 and conserved domain: PRK13870

>PRK13870 transcriptional regulator TraR; Provisional.
Probab=95.28  E-value=0.032  Score=33.81  Aligned_cols=50  Identities=14%  Similarity=0.114  Sum_probs=42.8

Q ss_pred             CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             32224641168899987189973789999998718877777530366789998851106
Q gi|254780893|r  146 HRIHLTGKEYQMIELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNA  204 (236)
Q Consensus       146 ~~i~LT~~E~~lL~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~  204 (236)
T Consensus       170 ~~~~LT~RE~E~L~W~A~--GK--T~~EIA~IL-----gISe~TV~fHl~na~~KL~a~  219 (234)
T PRK13870        170 DAAWLDPKEATYLRWIAV--GM--TMEEIADVE-----GVKYNSVRVKLREAMKRFDVR  219 (234)
T ss_pred             CCCCCCHHHHHHHHHHHC--CC--CHHHHHHHH-----CCCHHHHHHHHHHHHHHHCCC
T ss_conf             766799799999999978--99--899999997-----988999999999999995899