HHsearch alignment for GI: 254780893 and conserved domain: cd00156

>cd00156 REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; contains a phosphoacceptor site that is phosphorylated by histidine kinase homologs; usually found N-terminal to a DNA binding effector domain; forms homodimers.
Probab=99.93  E-value=6.4e-27  Score=182.45  Aligned_cols=113  Identities=35%  Similarity=0.622  Sum_probs=109.1

Q ss_pred             EEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf             99869989999999999988989999999899999998579947883114987433431112222322331001333210
Q gi|254780893|r    4 LLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILSGMSS   83 (236)
Q Consensus         4 Livedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls~~~~   83 (236)
T Consensus         1 LvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~~al~~~~~~~~dlvi~D~~mP~~~G~el~~~ir~~~~~~pvI~lT~~~~   80 (113)
T cd00156           1 LIVDDDPLIRELLRRLLEKEGYEVVEAEDGEEALALLAEEKPDLILLDIMMPGMDGLELLRRIRKRGPDIPIIFLTAHGD   80 (113)
T ss_pred             CEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             98927299999999999988999999899999999987579999997799989872699999998589995999978789


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             000011232210111223322211111222222
Q gi|254780893|r   84 IEDKVRGLQSGADDYISKPFNKEELVARIRAIV  116 (236)
Q Consensus        84 ~~~~~~al~~GAddyi~KP~~~~eL~ari~~ll  116 (236)
T Consensus        81 ~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~l  113 (113)
T cd00156          81 DEDAVEALKAGADDYLTKPFSPEELLARIRALL  113 (113)
T ss_pred             HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC
T ss_conf             999999997689789969899999999999869