HHsearch alignment for GI: 254780893 and conserved domain: cd02068
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=91.79 E-value=0.16 Score=29.52 Aligned_cols=87 Identities=13% Similarity=0.119 Sum_probs=55.8
Q ss_pred HHHHHHHHHHCCCEEEEEC---CHHHHHHHHHHCCCCEEEECCCCCCC-CCCCCCCCCCCCCCCCCEECCCCCCCHHCCC
Q ss_conf 9999999998898999999---98999999985799478831149874-3343111222232233100133321000001
Q gi|254780893|r 13 AHSIELMLKSENFNVYVTD---LGEDGIELCKFYEFDAIILDLGLTDI-PGFEVLRALRVAKISTPVCILSGMSSIEDKV 88 (236)
Q Consensus 13 ~~~l~~~L~~~g~~v~~a~---~~~eal~~~~~~~~DlvIlD~~lp~~-~G~~~~~~ir~~~~~~pII~ls~~~~~~~~~ 88 (236)
T Consensus 5 l~ylaa~L~~~G~~v~~~d~~~~~~~~e~~~~~~~pdvvg~s~~~~~~~~~~~~~~~~k~~~p~~~iv~GG~h~t~~p~- 83 (127)
T cd02068 5 LAYLAAVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISLMTSAIYEALELAKIAKEVLPNVIVVVGGPHATFFPE- 83 (127)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH-
T ss_conf 9999999997899579985787620399998649969999997688999999999999997899789985987454999-
Q ss_pred CCCCCCCCCCCC
Q ss_conf 123221011122
Q gi|254780893|r 89 RGLQSGADDYIS 100 (236)
Q Consensus 89 ~al~~GAddyi~ 100 (236)
T Consensus 84 ~~l~~~~~D~vv 95 (127)
T cd02068 84 EILEEPGVDFVV 95 (127)
T ss_pred HHHHCCCCCEEE
T ss_conf 997075877899