HHsearch alignment for GI: 254780893 and conserved domain: pfam00486

>pfam00486 Trans_reg_C Transcriptional regulatory protein, C terminal.

Probab=99.81  E-value=4e-20  Score=141.57  Aligned_cols=77  Identities=32%  Similarity=0.561  Sum_probs=73.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEE
Q ss_conf             33222464116889998718997378999999871887777753036678999885110678884388887820264
Q gi|254780893|r  145 GHRIHLTGKEYQMIELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVL  221 (236)
Q Consensus       145 g~~i~LT~~E~~lL~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~GY~l  221 (236)
T Consensus         1 G~~i~Lt~~E~~lL~~L~~~~~~~vsr~~l~~~iw~~~~~~~~~sl~~~I~rLR~kl~~~~~~~~~I~tv~g~GY~L   77 (77)
T pfam00486         1 GEEVELTPKEFDLLELLARNPGRVVSREELLEEVWGEDFDVDDNTVDVHISRLRKKLEDDPRDPRLIKTVRGVGYRL   77 (77)
T ss_pred             CCEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf             96723389999999999967997197999999963876665533099999999998754489998399848966449