PSIBLAST alignment of GI: 254780893 and protein with PDB id: 1kgs
>gi|17942992|pdb|1KGS|A Chain A, Crystal Structure At 1.50 A Of An OmprPHOB HOMOLOG FROM Thermotoga Maritima Length = 225
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 89/227 (39%), Positives = 127/227 (55%), Gaps = 5/227 (2%)
Query: 2 RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFE 61
R+L++ED++ LA I LK E F V V GE+G FD +ILD+ L G+E
Sbjct: 4 RVLVVEDERDLADLITEALKKEXFTVDVCYDGEEGXYXALNEPFDVVILDIXLPVHDGWE 63
Query: 62 VLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRG 121
+L++ R + ++TPV L+ +S +E +V+GL GADDY+ KPF+ EL+AR+RA++RR
Sbjct: 64 ILKSXRESGVNTPVLXLTALSDVEYRVKGLNXGADDYLPKPFDLRELIARVRALIRRKSE 123
Query: 122 HAQSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQMIELLSLRKNTTLTKEMFLNHLYDG 181
+ +V GDL ++ K I LT KEYQ++E L KN +TKE HL+
Sbjct: 124 SKSTKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVXNKNRVVTKEELQEHLWSF 183
Query: 182 RDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLRENAKDE 228
DE ++ I LRK + K I TV G GYV A+DE
Sbjct: 184 DDEVFSDVLRSHIKNLRK-KVDKGFKKKIIHTVRGIGYV----ARDE 225