PSIBLAST alignment of GI: 254780893 and protein with PDB id: 1kgs

>gi|17942992|pdb|1KGS|A Chain A, Crystal Structure At 1.50 A Of An OmprPHOB HOMOLOG FROM Thermotoga Maritima Length = 225
 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 89/227 (39%), Positives = 127/227 (55%), Gaps = 5/227 (2%)

Query: 2   RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFE 61
           R+L++ED++ LA  I   LK E F V V   GE+G        FD +ILD+ L    G+E
Sbjct: 4   RVLVVEDERDLADLITEALKKEXFTVDVCYDGEEGXYXALNEPFDVVILDIXLPVHDGWE 63

Query: 62  VLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRG 121
           +L++ R + ++TPV  L+ +S +E +V+GL  GADDY+ KPF+  EL+AR+RA++RR   
Sbjct: 64  ILKSXRESGVNTPVLXLTALSDVEYRVKGLNXGADDYLPKPFDLRELIARVRALIRRKSE 123

Query: 122 HAQSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQMIELLSLRKNTTLTKEMFLNHLYDG 181
              + +V GDL ++   K        I LT KEYQ++E L   KN  +TKE    HL+  
Sbjct: 124 SKSTKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVXNKNRVVTKEELQEHLWSF 183

Query: 182 RDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLRENAKDE 228
            DE    ++   I  LRK   +    K  I TV G GYV    A+DE
Sbjct: 184 DDEVFSDVLRSHIKNLRK-KVDKGFKKKIIHTVRGIGYV----ARDE 225