RPSBLAST alignment for GI: 254780893 and conserved domain: COG3707

>gnl|CDD|33502 COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms]. Length = 194

 Score = 43.3 bits (102), Expect = 6e-05
 Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 1   MRILLIEDDKALAHSIELMLKSENFN-VYVTDLGEDGIELCKFYEFDAIILDLGLTDIPG 59
           +R+L+ +D+      I   L    +  V     G + +E+C+  + D +ILD+   ++P 
Sbjct: 6   LRVLVADDEALTRMDIREGLLEAGYQRVGEAADGLEAVEVCERLQPDVVILDI---EMPR 62

Query: 60  FEVLRALRVAK--ISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVR 117
            +++ AL +A   ++ P+  L+  S        +++G   YI KP ++  L+  +   V 
Sbjct: 63  RDIIEALLLASENVARPIVALTAYSDPALIEAAIEAGVMAYIVKPLDESRLLPILDVAVS 122

Query: 118 RSR 120
           R  
Sbjct: 123 RFE 125