RPSBLAST alignment of GI: 254780893 and protein with PDBid: 1a04

>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A Length = 215

 Score = 96.1 bits (238), Expect = 6e-21
 Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 18/222 (8%)

Query: 1   MRILLIEDDKALAHSIELMLKSEN--FNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIP 58
             ILLI+D   L   ++ ++        V     GE GIEL +  + D I+LDL +  + 
Sbjct: 6   ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 65

Query: 59  GFEVLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRR 118
           G E L  LR   +S  + + S  +  ED V  L+ GAD Y+ K    E+L+  +      
Sbjct: 66  GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 125

Query: 119 SRGHAQSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQMIELLSLRKNTTLTKEMFLNHL 178
                 S  +T  L+ +L A     +     LT +E  +++L++         +   N +
Sbjct: 126 EM--VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIA---------QGLPNKM 174

Query: 179 YDGRDEPEVKIIDVFICKLRKKLSNAAGGKN-YIETVWGRGY 219
              R +     + V +  + KK+      K+     VW    
Sbjct: 175 IARRLDITESTVKVHVKHMLKKM----KLKSRVEAAVWVHQE 212