RPSBLAST alignment of GI: 254780893 and protein with PDBid: 1qo0

>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3 Length = 196
 Score = 75.7 bits (185), Expect = 9e-15
 Identities = 18/175 (10%), Positives = 56/175 (32%), Gaps = 11/175 (6%)

Query: 1   MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGF 60
           +++L++     ++ ++ L L     +V       +  ++      D +   +        
Sbjct: 13  LQVLVLNPPGEVSDALVLQLIRIGCSVRQCWPPPEAFDV----PVDVVFTSIFQNRHHDE 68

Query: 61  EVLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSR 120
                       T +  L    S     + ++      I++P +   ++  + +  R S 
Sbjct: 69  IAALLAA-GTPRTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARRISE 127

Query: 121 GHAQSLIVTGDLSVNLDAKTVEVQGHRI-----HLTGKE-YQMIELLSLRKNTTL 169
             A+    T  L   +  +    Q   +         +E +Q +   ++++   +
Sbjct: 128 EMAKLKQKTEQLQDRIAGQARINQAKVLLMQRHGWDEREAHQHLSREAMKRREPI 182