RPSBLAST alignment of GI: 254780893 and protein with PDBid: 1qo0
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3 Length = 196
Score = 75.7 bits (185), Expect = 9e-15
Identities = 18/175 (10%), Positives = 56/175 (32%), Gaps = 11/175 (6%)
Query: 1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGF 60
+++L++ ++ ++ L L +V + ++ D + +
Sbjct: 13 LQVLVLNPPGEVSDALVLQLIRIGCSVRQCWPPPEAFDV----PVDVVFTSIFQNRHHDE 68
Query: 61 EVLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSR 120
T + L S + ++ I++P + ++ + + R S
Sbjct: 69 IAALLAA-GTPRTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARRISE 127
Query: 121 GHAQSLIVTGDLSVNLDAKTVEVQGHRI-----HLTGKE-YQMIELLSLRKNTTL 169
A+ T L + + Q + +E +Q + ++++ +
Sbjct: 128 EMAKLKQKTEQLQDRIAGQARINQAKVLLMQRHGWDEREAHQHLSREAMKRREPI 182