RPSBLAST alignment of GI: 254780893 and protein with PDBid: 1s8n

>1s8n_A Putative antiterminator; structural genomics, transcriptional antiterminator, two component system, PSI; 1.48A {Mycobacterium tuberculosis H37RV} SCOP: c.23.1.1 PDB: 1sd5_A Length = 205
 Score =  112 bits (281), Expect = 6e-26
 Identities = 37/177 (20%), Positives = 80/177 (45%), Gaps = 8/177 (4%)

Query: 2   RILLIEDDKALAHSIELMLKSENFNVYVT-DLGEDGIELCKFYEFDAIILDLGLTDIPGF 60
           R+L+ ED+  +   +  ML+ E + +      G++ +EL + ++ D +I+D+ +    G 
Sbjct: 15  RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI 74

Query: 61  EVLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSR 120
           +    +  +K   P+ +L+  S  +   R   +GA  Y+ KPF+  +L+  I   V R R
Sbjct: 75  DAASEIA-SKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFR 133

Query: 121 GHAQSLIVTGDLSVNLDAKTVEVQGHRIHLT------GKEYQMIELLSLRKNTTLTK 171
                      LS  L+ + +  +   +  T         ++ I+  ++ + TT+ +
Sbjct: 134 EITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKR 190