RPSBLAST alignment of GI: 254780893 and protein with PDBid: 2hqr

>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, symmetric dimer, signaling protein; NMR {Helicobacter pylori J99} Length = 223
 Score =  100 bits (250), Expect = 2e-22
 Identities = 41/223 (18%), Positives = 87/223 (39%), Gaps = 7/223 (3%)

Query: 1   MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGF 60
           MR+LLIE +  L   IE  L  + F   VT+  EDG  L     +D +++          
Sbjct: 1   MRVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVMVSDKNALSFVS 60

Query: 61  EVLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSR 120
            +        +       +    +    +G                  +         + 
Sbjct: 61  RIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRFWGSNV 120

Query: 121 GHAQSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQMIELLSLRKNTTLTKEMFLNHLYD 180
                     DL+++ D + +  +G  + + GK ++++  L+  ++  ++KE  L+ +++
Sbjct: 121 IEIG------DLTISPDEEKIIYKGREVEVKGKPFEVLTHLARHRDQIVSKEQLLDAIWE 174

Query: 181 GRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLRE 223
             +     +I+V I ++R+K+ +   G + +ETV  RGY    
Sbjct: 175 EPEMVTPNVIEVAINQIRQKM-DKPLGISTVETVRRRGYRFCY 216