RPSBLAST alignment of GI: 254780893 and protein with PDBid: 2jk1
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HUPR1; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B Length = 139
Score = 101 bits (253), Expect = 1e-22
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 2 RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFE 61
ILL++D+ +++L L+ ++F+V E I + + II D + G +
Sbjct: 3 AILLVDDEPHSLAAMKLALE-DDFDVLTAQGAEAAIAILEEEWVQVIICDQRMPGRTGVD 61
Query: 62 VLRALRVAKISTPVCILSGMSSIEDKVRGLQ-SGADDYISKPFNKEELVARIRAIVRRSR 120
L +R T I++G + + + +G +++KP++ E+L++ R R
Sbjct: 62 FLTEVRERWPETVRIIITGYTDSASMMAAINDAGIHQFLTKPWHPEQLLSSARNAARMFT 121