RPSBLAST alignment of GI: 254780893 and protein with PDBid: 2qzj
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics, protein structure initiative; 2.89A {Clostridium difficile 630} Length = 136
Score = 106 bits (266), Expect = 4e-24
Identities = 32/125 (25%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGF 60
+IL+I+ DK ++ L+ + ++ + E+ I ++D I L++ L+D G+
Sbjct: 5 TKILIIDGDKDNCQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYDLIFLEIILSDGDGW 64
Query: 61 EVLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSR 120
+ + +R P+ ++ ++ + + L SG DDY+ KP N E L A+++AI+RR
Sbjct: 65 TLCKKIRNVTT-CPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAKVKAILRRMN 123
Query: 121 GHAQS 125
+ +
Sbjct: 124 SYVNN 128