RPSBLAST alignment of GI: 254780893 and protein with PDBid: 3dzd

>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A Length = 368

 Score =  110 bits (277), Expect = 3e-25
 Identities = 25/123 (20%), Positives = 61/123 (49%)

Query: 2   RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFE 61
           R+L+++D++++  S+  +L+ E ++        +  +  K   F  I+LD+ + D  G  
Sbjct: 2   RVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELFFPVIVLDVWMPDGDGVN 61

Query: 62  VLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRG 121
            +  ++     + V +++G  S++  V+ ++ GA +++ KPF+ E  +  I+        
Sbjct: 62  FIDFIKENSPDSVVIVITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFEEYSK 121

Query: 122 HAQ 124
            A 
Sbjct: 122 KAP 124