RPSBLAST alignment of GI: 254780893 and protein with PDBid: 3eqz
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.15A {Colwellia psychrerythraea 34H} Length = 135
Score = 110 bits (275), Expect = 4e-25
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 6/123 (4%)
Query: 2 RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFE 61
R+ +++DD + ++ +++ NV + D IILDL + D+ G E
Sbjct: 5 RVFIVDDDTLTCNLLKTIVEPIFGNVEAFQ-HPRAFLTLSLNKQDIIILDLMMPDMDGIE 63
Query: 62 VLRALRVAKISTPVCILSGMS-----SIEDKVRGLQSGADDYISKPFNKEELVARIRAIV 116
V+R L K + ++SG S E + +KP N E L + ++
Sbjct: 64 VIRHLAEHKSPASLILISGYDSGVLHSAETLALSCGLNVINTFTKPINTEVLTCFLTSLS 123
Query: 117 RRS 119
R
Sbjct: 124 NRQ 126