RPSBLAST alignment of GI: 254780893 and protein with PDBid: 3eul
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis} Length = 152
Score = 110 bits (276), Expect = 4e-25
Identities = 26/122 (21%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 1 MRILLIEDDKALAHSIELMLKSENFN--VYVTDLGEDGIELCKFYEFDAIILDLGLTDIP 58
+R+++ +D + L V D G +EL K + D +LD + +
Sbjct: 16 VRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMD 75
Query: 59 GFEVLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRR 118
G +V A+R ++ T V ++S + LQ GA ++ K + E+V + +
Sbjct: 76 GAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKG 135
Query: 119 SR 120
Sbjct: 136 RD 137