RPSBLAST alignment of GI: 254780893 and protein with PDBid: 3h5i
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} Length = 140
Score = 104 bits (260), Expect = 2e-23
Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
Query: 1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIIL--DLGLTDIP 58
+IL++ED K A +I +L + V + GE +E + +IL +
Sbjct: 6 KKILIVEDSKFQAKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIELGEGMD 65
Query: 59 GFEVLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRR 118
G + A++ PV L+ + + A Y+ K ++ L+ + +R
Sbjct: 66 GVQTALAIQ-QISELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALRL 124
Query: 119 SRGHAQS 125
+ +
Sbjct: 125 YEANVHA 131