RPSBLAST alignment of GI: 254780893 and protein with PDBid: 3h5i

>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} Length = 140
 Score =  104 bits (260), Expect = 2e-23
 Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 3/127 (2%)

Query: 1   MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIIL--DLGLTDIP 58
            +IL++ED K  A +I  +L    + V +   GE  +E      +  +IL        + 
Sbjct: 6   KKILIVEDSKFQAKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIELGEGMD 65

Query: 59  GFEVLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRR 118
           G +   A++      PV  L+  +      +     A  Y+ K   ++ L+  +   +R 
Sbjct: 66  GVQTALAIQ-QISELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALRL 124

Query: 119 SRGHAQS 125
              +  +
Sbjct: 125 YEANVHA 131