RPSBLAST alignment of GI: 254780893 and protein with PDBid: 3hdv

>3hdv_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.09A {Pseudomonas putida KT2440} Length = 136
 Score =  113 bits (283), Expect = 4e-26
 Identities = 25/122 (20%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIE-LCKFYEFDAIILDLGLTDIPGF 60
            +L+++D+     ++ L LKS   +    D  E+    L        +I DL +    G 
Sbjct: 9   LVLVVDDNAVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRMQPESGL 68

Query: 61  EVLRALRVAKIS-TPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRS 119
           +++R +R ++ +   + ++SG + +E+ V  +  G  D++ KP +  +L+  +   ++  
Sbjct: 69  DLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELVNKELKIG 128

Query: 120 RG 121
            G
Sbjct: 129 EG 130