HHsearch alignment for GI: 254780896 and conserved domain: COG4603
>COG4603 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=99.91 E-value=1.5e-22 Score=154.76 Aligned_cols=260 Identities=17% Similarity=0.175 Sum_probs=175.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 47237999999999999999999999998432248999999999999999720456-53036533578898898765444
Q gi|254780896|r 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGL 112 (351)
Q Consensus 34 ~~~~~~~~~~~~~~i~~l~alGl~li~G~~G~inl~~g~~~~~Gay~~~~l~~~~g-~~~~~ai~~a~~~~a~~g~l~g~ 112 (351)
T Consensus 53 ~~~~~i~~~l~~~~pliltgL~~ava~-raGlfNIG~EGQ~~~Gai~a~~~~~~~~~~p~~l~~p~a~l~g~~~G~~wa~ 131 (356)
T COG4603 53 GSPWSIGELLVKAAPLILTGLGVAVAF-RAGLFNIGAEGQFYAGAIAAALVALLFPDLPSWLALPLALLAGAAGGGLWAL 131 (356)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 786789999999999999999999999-9378226717799999999999999757777479999999999999999999
Q ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 454321---34577779998898999998555405876788577652112123476434343333100148999999999
Q gi|254780896|r 113 PSLKFR---GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 (351)
Q Consensus 113 ~~~rl~---g~~~~i~Tl~~~~i~~~~~~~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
T Consensus 132 ipg~Lka~f~~nEVIttiMlNyIa~~l~~~lV---~~---~~~~p~~~-~~~~T~~i~~~a~lp~~~~~~~-~~~~g~li 203 (356)
T COG4603 132 IPGLLKARFGVNEVITTIMLNYIAVYLLNYLV---EG---PLRDPAGT-NFPQTRPIPDAARLPSLFLASG-RLHWGFLL 203 (356)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH---CC---CCCCCCCC-CCCCCCCCCHHHCCCCCCCCCC-HHHHHHHH
T ss_conf 99999999186299999999999999999998---07---24588767-8866825751113775542111-28999999
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHEECCCCCCHHHHHH
Q ss_conf 999999999996130599999996421222334202322367999998799999999999866-4401135431589999
Q gi|254780896|r 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENII 268 (351)
Q Consensus 190 ~~~~~~~l~~~l~rT~~G~~lrAv~~n~~aA~~~Ginv~~~~~~af~is~~lAgiaG~l~a~~-~~~v~p~~~~~~~~~~ 268 (351)
T Consensus 204 al~~av~~~~ll~kT~~G~~lr~~G~sp~Aa~yaGi~~~r~i~~sm~iSGalAGLaG~~ev~G~~~~~~~-~~~~G~Gf~ 282 (356)
T COG4603 204 ALAAAVLVWFLLKKTVFGYELRVVGLSPRAARYAGISVKRTIFLSMLISGALAGLAGAVEVLGAFGRLRP-SISPGYGFD 282 (356)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC-CCCCCCCHH
T ss_conf 9999999999999814775888724880389987987468999999999999999889998152010003-667776728
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 889887347422389999999999999999873122
Q gi|254780896|r 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 (351)
Q Consensus 269 ~~~~vvlGG~gs~~Ga~lGa~~l~~~~~~~~~~~~~ 304 (351)
T Consensus 283 gI~Vallg~-~~P~giv~asll~~~l~~G~~~~~~~ 317 (356)
T COG4603 283 GIAVALLGR-NNPLGIVFASLLFGFLYIGAEAAQLN 317 (356)
T ss_pred HHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999806-88378999999999999868987640