HHsearch alignment for GI: 254780896 and conserved domain: PRK10740
>PRK10740 branched-chain amino acid transporter permease subunit LivH; Reviewed.
Probab=100.00 E-value=0 Score=317.94 Aligned_cols=287 Identities=16% Similarity=0.209 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC---CCC-CHHHHHHHHHHHH----HHHHHHH
Q ss_conf 9999999999999999999999984322489999999999999997204---565-3036533578898----8987654
Q gi|254780896|r 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR---YGL-SIWLLIPVSAMIS----GACGMIM 110 (351)
Q Consensus 39 ~~~~~~~~~i~~l~alGl~li~G~~G~inl~~g~~~~~Gay~~~~l~~~---~g~-~~~~ai~~a~~~~----a~~g~l~ 110 (351)
T Consensus 12 l~~Gl~~G~iyaL~AlGl~Li~G~~gv~Nfahg~f~~~GaY~~~~l~~~~~~~~~~~~~~~~~~~~~~a~v~~~~~g~~i 91 (308)
T PRK10740 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWLLVAAGFVGAIVIASAYGWSI 91 (308)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999957797999999999999999999998856531479999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 44454321345777799988989999985554058767885776521121234764343433331001489999999999
Q gi|254780896|r 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 (351)
Q Consensus 111 g~~~~rl~g~~~~i~Tl~~~~i~~~~~~~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (351)
T Consensus 92 ~r~~~r~~~~~~~~~~li~t~gl~~~l~~~~~~~~g~~~~~~p~~~~--~~~~-----~~~~~~~~~~~~~~~l~~~~v~ 164 (308)
T PRK10740 92 ERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFN--GQWV-----VGHSENFSASITTMQAVIWIVT 164 (308)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--CCCC-----CCCCCCCCEEEHHHHHHHHHHH
T ss_conf 99999986445259999999999999999999803977650785456--7542-----3555454333219999999999
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHH
Q ss_conf 99999999996130599999996421222334202322367999998799999999999866440113543158999988
Q gi|254780896|r 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 (351)
Q Consensus 191 ~~~~~~l~~~l~rT~~G~~lrAv~~n~~aA~~~Ginv~~~~~~af~is~~lAgiaG~l~a~~~~~v~p~~~~~~~~~~~~ 270 (351)
T Consensus 165 ~~~~~~l~l~l~rT~~G~a~RAv~~n~~~A~~~GIn~~rv~~~af~i~~~laglaG~l~a~~~~~i~P~~-g~~~~~~~f 243 (308)
T PRK10740 165 FLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYI-GFMAGMKAF 243 (308)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHH
T ss_conf 9999999999972839689999966788998909889999999999999999999999987743658432-489999998
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 9887347422389999999999999999873122100001234442025899999999999998589965667402
Q gi|254780896|r 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 (351)
Q Consensus 271 ~~vvlGG~gs~~Ga~lGa~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lilvll~rP~Gl~g~r~~~ 346 (351)
T Consensus 244 ~~vvlGGlGs~~Gaivgal~lg~~e~~~~~~~~-------------~~~~~~~~~~llilvLl~rP~GLfG~~~~~ 306 (308)
T PRK10740 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLS-------------TEYKDVVSFALLILVLLVMPTGILGRPEVE 306 (308)
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-------------HHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
T ss_conf 962137877489999999999999999998623-------------789999999999999998599868998100