HHsearch alignment for GI: 254780896 and conserved domain: PRK11618

>PRK11618 inner membrane ABC transporter permease protein YjfF; Provisional.
Probab=100.00  E-value=2.3e-37  Score=244.76  Aligned_cols=305  Identities=16%  Similarity=0.109  Sum_probs=222.6

Q ss_pred             HHHHHHHHHHHHHHHHHH-H-HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             669999999999999999-9-75301472379999999999999999999999984322489999999999999997204
Q gi|254780896|r   10 KYDKILCLLAVVYPLLLF-L-FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR   87 (351)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~i~~l~alGl~li~G~~G~inl~~g~~~~~Gay~~~~l~~~   87 (351)
T Consensus         4 r~~p~~i~i~vlivl~i~~~~~~p~Fls~~Nl~~il~~~a~l~I~AlG~t~vi-i~GgIDLSvGs~~~l~~~v~a~l~~~   82 (317)
T PRK11618          4 RNLPLLITIGVFVLGYLFCLVQFPGFASTRVICNLLTDNAFLGIVAVGMTFVI-LSGGIDLSVGSVIAFTGVFLAVLIGR   82 (317)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             41459999999999999999918988888999999999999999999999999-95786052999999999999999986


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             56530365335788988987654444543213457777999889899999855540587678857765211212347643
Q gi|254780896|r   88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI  167 (351)
Q Consensus        88 ~g~~~~~ai~~a~~~~a~~g~l~g~~~~rl~g~~~~i~Tl~~~~i~~~~~~~~~~~~~g~~gi~~~~~~~~~~~~~~~~~  167 (351)
T Consensus        83 ~g~~~~lai~~~l~~g~~~G~iNG~lv~~~~ipsf-IvTLg~~~i~~Gl~~~~---~~~~~~~~~---~~~~~~------  149 (317)
T PRK11618         83 YGWHPLLAFPLVLVMGALFGALMGALIHYLKLPAF-IVTLAGMFLARGVSFLV---SEESIPINH---PIYDTL------  149 (317)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHH---CCCCCCCCC---CHHHHH------
T ss_conf             69858999999999999999999999999727829-99999999999999986---188724577---247777------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             43433331001489999999999999999999961305999999964212223342023223679999987999999999
Q gi|254780896|r  168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA  247 (351)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~rT~~G~~lrAv~~n~~aA~~~Ginv~~~~~~af~is~~lAgiaG~  247 (351)
T Consensus       150 ~~~~~~~~~~---~~ip~~~~i~l~~~~~~~~~l~~T~~GR~lyAvG~N~~AA~~sGI~v~r~~i~~fvisG~~aglAGi  226 (317)
T PRK11618        150 SSLAWKLPGG---GRLTAMALIMLAVVAIGIFLAHRTRFGNNVYAIGGNATSANLMGVPVRRTTIRIYALSGFLAALAGI  226 (317)
T ss_pred             HHHHHHHCCC---CCCHHHHHHHHHHHHHHHHHHHHCHHHCEEEEECCCHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHH
T ss_conf             7777662468---7414999999999999999997482006688867989999994998234220799999999999999


Q ss_pred             HHHHHHHEECCCCCCHHHHHHHHHHHHH------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf             9986644011354315899998898873------4742238999999999999999987312210000123444202589
Q gi|254780896|r  248 FFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT  321 (351)
Q Consensus       248 l~a~~~~~v~p~~~~~~~~~~~~~~vvl------GG~gs~~Ga~lGa~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (351)
T Consensus       227 l~~~~~~s~~~~~-G~~~~l~aIaAvviGGtsl~GG~Gsv~Gt~lGal~l~~i~ngl~l~g-----------~v~~~~q~  294 (317)
T PRK11618        227 VFSLYTSAGYALA-AVGVELDAIAAVVIGGTLLTGGVGTVLGTLFGVLIQGLIQTYITFDG-----------TLSSWWTK  294 (317)
T ss_pred             HHHHHHCCCCCCC-CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-----------CCCHHHHH
T ss_conf             9999845818676-76658999999998576778995146999999999999999998637-----------89879999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99999999999985899656674
Q gi|254780896|r  322 TLMVIALFLVILMRSHSLLRLRT  344 (351)
Q Consensus       322 ~l~~~~lilvll~rP~Gl~g~r~  344 (351)
T Consensus       295 ~~~G~ill~-aV~l~r~l~~~~~  316 (317)
T PRK11618        295 IVIGILLFV-FIALQRGLTVLWE  316 (317)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHC
T ss_conf             999999899-9997414888614