BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780896|ref|YP_003065309.1| ABC transporter membrane spanning protein (branched chain amino acid) [Candidatus Liberibacter asiaticus str. psy62] (351 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|238060176|ref|ZP_04604885.1| inner-membrane translocator [Micromonospora sp. ATCC 39149] gi|237881987|gb|EEP70815.1| inner-membrane translocator [Micromonospora sp. ATCC 39149] Length = 643 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 81/360 (22%), Positives = 153/360 (42%), Gaps = 30/360 (8%) Query: 7 RLNKYDKILCLLAVVYPL------------LLFLFLGATKSQKYIDSMGIQILIYVMFAW 54 + ++ I L+ ++Y L + + ++ + ++V+ A Sbjct: 281 KQVRWAAIAALIVLLYILPNRWFYEYLGFPIGSEYFAFYTTRSDFAGVLFDTAVFVLLAV 340 Query: 55 GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMI 109 GL++VVG GLL L YA+GAY+ +L S +P++ M++ G+I Sbjct: 341 GLNVVVGFAGLLDLGYFGFYALGAYTVALLTSPESRLGTNWPWLAAVPIAVMVAMISGVI 400 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 +G P+L+ RGDYLAI TL +E+ + + + + G+ GI Sbjct: 401 LGGPTLRLRGDYLAIVTLGFAEMIRLYAARNEGVLQGQRGIPAIPHP--------PGTGS 452 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 P V+ Y++LL + L ++ L + + AW R+++ A + Sbjct: 453 DGKPLFGVVDARPYYWLLLTLILLVIVLVRNLANSRVGRAWVATREDEDAAEVMGVPTFK 512 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL AFA+ +A G+ GA FA + I+ D F +I+V++ VILGG ++ A Sbjct: 513 YKLWAFAIGAAVAGLTGAVFAGKQTFINSDQFVLESSILVLAAVILGGAGNIKGAIVGGA 572 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 I + E G+ L+ + + + + ++++ R ++ R + Sbjct: 573 ITWYLPEWLRGV-----GDLVGVEFDAAEYRILVFGLVIIVMMIFRPQGIVPNRRRAAEF 627 >gi|114707716|ref|ZP_01440611.1| putative permease of ABC transporter (high-affinity branched-chain amino acid transport) [Fulvimarina pelagi HTCC2506] gi|114536960|gb|EAU40089.1| putative permease of ABC transporter (high-affinity branched-chain amino acid transport) [Fulvimarina pelagi HTCC2506] Length = 486 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 103/341 (30%), Positives = 177/341 (51%), Gaps = 6/341 (1%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + +L V L + L + +Y+ + I IL YVM WGL+IVVG GLL L V Y Sbjct: 133 VAMLIVAIFLPVLLDTFLPRQNRYLLDLSILILTYVMLGWGLNIVVGLAGLLDLGYVAFY 192 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAYS+ +L + + L W+ +P++ + + G+++G P L+ RGDYLAI TL EI + Sbjct: 193 AVGAYSFALLSTNFDLGFWVCLPMAGLFAALWGIMLGFPVLRLRGDYLAIVTLAFGEIIR 252 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 +L+ W T G G+ + G +F + +F+YY++L + Sbjct: 253 VVLLNWYEFTGGPNGLLGIPKPTLFGLEFSRGDDGFAAYFGIDYDPIQRFVFLYYIILAL 312 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L+ + + +R+ + AW +R+++ A +L + KLSAFA + F G AG+FFA Sbjct: 313 ALLTNFVTMRMRKLPVGRAWEALREDEIACRALGINTVNVKLSAFATGAMFGGFAGSFFA 372 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + ISP+ F F E+ I+++IV+LGG+ S + A+ ++IG +EL + ++ Sbjct: 373 TRQGFISPESFTFIESAIILAIVVLGGLGSQLGVVIASVVMIGGIELLRNLT--VLEAVF 430 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +A+ +++ + L+ R PS F + Sbjct: 431 GAGFDPTQYRMLIFGLAMVAIMVWKPRGLISTRIPSVFYKE 471 >gi|218194347|gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group] Length = 1860 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 93/320 (29%), Positives = 145/320 (45%), Gaps = 17/320 (5%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 + L + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 287 LMAAIALLFPFVATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLA 346 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + GL W ++P+ A+++ G ++G P L+ GDYLAI TL EI + +L W Sbjct: 347 LGYQYLGLGFWAMLPLGALMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWMS 406 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G GI V F R + Y + ++ + ++ Sbjct: 407 LTGGPNGISVPAPTVFGLEFGRRAKDGGVPIHEFLGIDYNPNLKFIFIYAMLFLVVLLHR 466 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R I AW +R+++ A SL + KLSAF + ++ G+AG FFA + ++P Sbjct: 467 LTRMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMLGASTAGLAGVFFATYQGFVNPTS 526 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F E+ ++++IV+LGGM S + A +L EL Y Sbjct: 527 FTFFESALILAIVVLGGMGSTLGVVLAAFVLTVAPELLRSFAEY---------------R 571 Query: 321 TTLMVIALFLVILMRSHSLL 340 L + + +++ R L Sbjct: 572 VLLFGVLMVAMMIWRPRGLA 591 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 49/155 (31%), Gaps = 1/155 (0%) Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 T+ S + F V ++L+ A + ++RT + R + Sbjct: 15 PRQQGIPTLLSGVFRLEFDGGVVQITYTKVFILVVSLLGMAILTYIIQRTRLGRICRATQ 74 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++K L F + +A G+AG + + F I + + Sbjct: 75 QDRKMASILGINTDRVISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFIIGIKAFTAAV 133 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 LGG+ SL +L GM + + Sbjct: 134 LGGIGSLPGAMLGGLLLGVAEAQFAGMVNSDYKDV 168 >gi|190893150|ref|YP_001979692.1| amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190698429|gb|ACE92514.1| amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|327190934|gb|EGE57988.1| amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 463 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 135/347 (38%), Positives = 204/347 (58%), Gaps = 6/347 (1%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + K L V+YP+++ +GA S K++D+ GIQILIYVM AWGL+IVVG GLL L Sbjct: 105 RHFLKFALLALVLYPVVIVALVGAQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 V YA+GAYSY +L S +GLS W+L+P+S ++ G+I+G P L+ RGDYLAI TL Sbjct: 165 GYVAFYAVGAYSYALLSSYFGLSFWVLLPLSGTLAALWGVILGFPVLRLRGDYLAIVTLA 224 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184 EI + +LI W +T G GI + G + F P S Y+IF++ Sbjct: 225 FGEIIRLVLINWTDVTKGTFGISSIPKATLFGIPFDATAGGFAKLFHLPMSSAYYKIFLF 284 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++L +C L+A + + LRR I AW +R+++ A SL + KL+AFA + F G Sbjct: 285 YLILALCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGF 344 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+FFAA + +SP+ F F E+ +V++IV+LGGM SL+ IA A +++G E M+ Sbjct: 345 AGSFFAARQGFVSPESFIFLESAVVLAIVVLGGMGSLTGIAIAAIVMVGGTEALREMD-- 402 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + ++ D + + L +A+ +V+L + + R P+ FL+ Sbjct: 403 FLKAVFGPDFTPELYRMLLFGLAMVVVMLFKPRGFVGSREPTAFLKE 449 >gi|6996600|emb|CAB75550.1| integral membrane protein [Rhizobium leguminosarum bv. viciae] Length = 462 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 130/334 (38%), Positives = 195/334 (58%), Gaps = 6/334 (1%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 YP+++ F G S Y+D+ GIQILIYVM AWGL+IVVG GLL L V YA+GAYSY Sbjct: 117 YPMVVVAFKGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGAYSY 176 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L S +GLS W+L+P+S + + G+I+G P L+ RGDYLAI TL EI + +LI W Sbjct: 177 ALLSSYFGLSFWVLLPLSGIFAALWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLINWT 236 Query: 142 PITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +T G GI + G + F P S Y+IF++Y++L +C L+A + Sbjct: 237 EVTKGTFGISSIPKATLFGIPFDATAGGFAKLFHLPISSAYYKIFLFYLILALCMLTAYV 296 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR I AW +R+++ A SL + KL+AFA + F G AG+FFAA + +S Sbjct: 297 TNSVRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFAGFAGSFFAARQGFVS 356 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+ ++++IV+LGGM SL+ IA A +++G EL M+ + + D + Sbjct: 357 PESFVFLESAVILAIVVLGGMGSLTGIAIAAIVMVGGTELLRSMD--FLKLIFGPDFTPE 414 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + +A+ +V+L + + R P+ FL Sbjct: 415 LYRMLIFGLAMVVVMLFKPRGFVGSREPTAFLRE 448 >gi|30911168|gb|AAP41936.1| BraE [Rhizobium leguminosarum bv. trifolii] Length = 455 Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 129/334 (38%), Positives = 194/334 (58%), Gaps = 6/334 (1%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 YP+++ F G S Y+D+ GIQILIYVM AWGL+IVVG GLL L V YA+GAYSY Sbjct: 117 YPMVVVAFKGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGAYSY 176 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L S +GLS W+L+P+S + + G+I+G P L+ RGDYLAI TL EI + +LI W Sbjct: 177 ALLSSYFGLSFWVLLPLSGIFAALWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLINWT 236 Query: 142 PITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +T G GI + G + F P S Y+ F++Y++L +C L+A + Sbjct: 237 EVTKGTFGISSIPKATLFGIPFDATAGGFAKLFHLPISSAYYKNFLFYLILALCMLTAYV 296 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR I AW +R+++ A SL + KL+AFA + F G AG+FFAA + +S Sbjct: 297 TNSVRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFAGFAGSFFAARQGFVS 356 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+ ++++IV+LGGM SL+ IA A +++G EL M+ + + D + Sbjct: 357 PESFVFLESAVILAIVVLGGMGSLTGIAIAAIVMVGGTELLRSMD--FLKLIFGPDFTPE 414 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + +A+ +V+L + + R P+ FL Sbjct: 415 LYRMLIFGLAMVVVMLFKPRGFVGSREPTAFLRE 448 >gi|217969002|ref|YP_002354236.1| inner-membrane translocator [Thauera sp. MZ1T] gi|217506329|gb|ACK53340.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 443 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 176/351 (50%), Gaps = 23/351 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + +++ +L V +Y+ +LIYVM WGL++VVG GLL Sbjct: 94 RAHGAQRVVNVLGWVALGASIALPIVFSDNRYVVDTATTVLIYVMLGWGLNVVVGLAGLL 153 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L V YA+GAYSY +L +++G S W +PVS ++ + G+++G P L+ RGDYLAI T Sbjct: 154 DLGYVAFYAVGAYSYALLSTQFGWSFWEALPVSGALAASFGILLGYPILRLRGDYLAIVT 213 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVI 178 L EI + IL+ W + G GI R F G + FF S + Sbjct: 214 LGFGEIIRIILVNWTEFSGGPNGISSIPRPSFFGLDFTRSAPEGGQTFSGFFGLEFSPMH 273 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 IF+YY++L + L+ + + LR+ + AW +R+++ A ++ KLSAFA+ Sbjct: 274 RLIFLYYLILVLALLTHAFVSRLRKLPVGRAWEALREDEIACQAMGMNTTNIKLSAFAIG 333 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + G AG FFAA + ISP+ F F+E+ I+++IV+LGGM S + A +L+ + E Sbjct: 334 AMLGGFAGVFFAARQGFISPESFTFTESAIILAIVVLGGMGSQMGVVLAATLLVLIPEFG 393 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 Y L +A+ L+++ R LL R P+ L Sbjct: 394 RNFAEY---------------RMLLFGLAMVLIMVWRPGGLLSHREPTVRL 429 >gi|241206017|ref|YP_002977113.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859907|gb|ACS57574.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 463 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 133/347 (38%), Positives = 201/347 (57%), Gaps = 6/347 (1%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + KI + ++YPL++ G S Y+D+ GIQILIYVM AWGL+IVVG GLL L Sbjct: 105 RHFLKIALIALLLYPLVVVAIKGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 V YA+GAYSY +L S +GLS W+L+P+S + + G+I+G P L+ RGDYLAI TL Sbjct: 165 GYVAFYAVGAYSYALLSSYFGLSFWVLLPLSGIFAALWGVILGFPVLRLRGDYLAIVTLA 224 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184 EI + +LI W +T G GI + G + F P S Y+IF++ Sbjct: 225 FGEIIRLVLINWTDVTRGTFGISSIPKATLFGIPFDATAGGFAKLFHLPPSSAYYKIFLF 284 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++L +C L+A + + LRR I AW +R+++ A SL + KL+AFA + F G Sbjct: 285 YLILMLCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFAGF 344 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+FFAA + +SP+ F F E+ ++++IV+LGGM SL+ IA A +++G EL M+ Sbjct: 345 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAAIVMVGGTELLRSMD-- 402 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + D + + + +A+ +V+L + + R P+ FL Sbjct: 403 FLKLIFGPDFTPELYRMLIFGLAMVVVMLFKPRGFVGSREPTAFLRE 449 >gi|220921738|ref|YP_002497039.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219946344|gb|ACL56736.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 474 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 186/344 (54%), Gaps = 6/344 (1%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + +A+ +PLL+ L G +Y +GI IL YVM WGL+IVVG GLL L V Sbjct: 119 LPVFLGVALAFPLLVVLGTGGLSESRYWVDLGILILTYVMLGWGLNIVVGLAGLLDLGYV 178 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 YA+GAY+Y +L + + LS W+ +P++ + + GMI+G P L+ RGDYLAI TL E Sbjct: 179 AFYAVGAYTYALLSTTFDLSFWICLPLAGLFAACWGMILGFPVLRLRGDYLAIVTLAFGE 238 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVL 187 I + +LI W ++ G AG+ R+ F G F + +F+YY++ Sbjct: 239 IIRLVLINWSDLSGGAAGVSSIPRVTFFGVPFTADEDGFAARFGITFDPMHRVVFLYYLI 298 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + ++ + L LRR + AW +R+++ A SL KL+AFA+ + F G+AG+ Sbjct: 299 LTLALVTNLVTLRLRRLPLGRAWEALREDEIACRSLGINTTNTKLTAFALGAMFGGIAGS 358 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 FFA + +SP+ F F E+ I+++IV+LGGM S +A A ++G EL + + Sbjct: 359 FFAVRQGFVSPESFNFLESAIILAIVVLGGMGSQIGVAIAAVAMVGGPELLRNLG--FLR 416 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L +A+ L+++ R L+ R PS L+ Sbjct: 417 AVFGEGFDPSEYRLLLFGLAMVLMMIWRPRGLISERAPSVVLKE 460 >gi|116253490|ref|YP_769328.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258138|emb|CAK09239.1| transmembrane component of a broad range amino acid ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 463 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 132/347 (38%), Positives = 201/347 (57%), Gaps = 6/347 (1%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + KI + ++YP+++ G S Y+D+ GIQILIYVM AWGL+IVVG GLL L Sbjct: 105 RHFLKIALIALLLYPMVVVAIKGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 V YA+GAYSY +L S +GLS W+L+P+S + + G+I+G P L+ RGDYLAI TL Sbjct: 165 GYVAFYAVGAYSYALLSSYFGLSFWVLLPLSGIFAALWGVILGFPVLRLRGDYLAIVTLA 224 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184 EI + +LI W +T G GI + G + F P S Y+IF++ Sbjct: 225 FGEIIRLVLINWTDVTKGTFGISSIPKATLFGIPFDATAGGFAKLFHLPISSAYYKIFLF 284 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++L +C L+A + + LRR I AW +R+++ A SL + KL+AFA + F G Sbjct: 285 YLILALCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFAGF 344 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+FFAA + +SP+ F F E+ ++++IV+LGGM SL+ IA A +++G EL M+ Sbjct: 345 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAAIVMVGGTELLREMS-- 402 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + D + + + +A+ +V+L + + R P+ FL Sbjct: 403 FLKLIFGPDFTPELYRMLIFGLAMVVVMLFKPRGFVGSREPTAFLRE 449 >gi|262198563|ref|YP_003269772.1| inner-membrane translocator [Haliangium ochraceum DSM 14365] gi|262081910|gb|ACY17879.1| inner-membrane translocator [Haliangium ochraceum DSM 14365] Length = 463 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 113/345 (32%), Positives = 174/345 (50%), Gaps = 23/345 (6%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 K+ + V+ L + +Y+ + +L Y+M WGL+IVVG GLL L V Sbjct: 119 KLPVIAGVLGVALAAGLPLMPFADRYVVDVATLVLTYIMLGWGLNIVVGLAGLLDLGYVA 178 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 YA+GAYSY +L + +S W +P++ + + G+++G P L+ RGDYLAI TL EI Sbjct: 179 FYAVGAYSYALLAFYFDMSFWACLPLAGVFAATFGVLLGFPVLRLRGDYLAIVTLGFGEI 238 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMY 184 + +L+ W T G GI R F G + FF S + +F+Y Sbjct: 239 IRVVLLNWTEFTRGPDGISGIPRPSFFGLPFSRRVPEGGDTFHTFFGLDYSSMHRIVFLY 298 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++L + L+ + IL +R+ + AW +R+++ A SL KLSAFA+ + F G Sbjct: 299 YLILVLALLTNAFILRVRKLPLGRAWEALREDEIACRSLGIDPTRTKLSAFALGAMFGGF 358 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGAFF+A + ISP+ F F E+ ++++IV+LGGM S + A +LIG E G+ Y Sbjct: 359 AGAFFSARQGFISPESFTFIESAVILAIVVLGGMGSQLGVVIAAVLLIGGTEWFRGLAEY 418 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 A+ L+++ R LL R P+ L Sbjct: 419 ---------------RMLGFGAAMVLIMVWRPRGLLAHRKPTVTL 448 >gi|86358923|ref|YP_470815.1| amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86283025|gb|ABC92088.1| amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 463 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 133/346 (38%), Positives = 205/346 (59%), Gaps = 6/346 (1%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + KI + ++YP+++ +GA S K++D+ GIQILIYVM AWGL+IVVG GLL L Sbjct: 105 RHFLKIALIALLLYPMVIVALVGAQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 V YA+GAYSY +L S +GLS W+L+P+S +++ G+I+G P L+ RGDYLAI TL Sbjct: 165 GYVAFYAVGAYSYALLSSYFGLSFWVLLPLSGILAALWGLILGFPVLRLRGDYLAIVTLA 224 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184 EI + +LI W +T G GI + G + F S Y+IF++ Sbjct: 225 FGEIIRLVLINWTDVTRGTFGISSIPKATLFGIPFDATAGGFAKLFHLSMSSAYYKIFLF 284 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++L +C L+A + + LRR I AW +R+++ A SL + KL+AFA + F G Sbjct: 285 YLILALCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGF 344 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+FFAA + +SP+ F F E+ +V++IV+LGGM SL+ IA A +++G E M+ Sbjct: 345 AGSFFAARQGFVSPESFIFLESAVVLAIVVLGGMGSLTGIAIAAIVMVGGTEALREMD-- 402 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + ++ D + + L +A+ +V+L + + R P+ FL+ Sbjct: 403 FLKAVFGPDFTPELYRMLLFGLAMVVVMLFKPRGFVGSREPTAFLK 448 >gi|163794737|ref|ZP_02188707.1| inner-membrane translocator [alpha proteobacterium BAL199] gi|159180010|gb|EDP64535.1| inner-membrane translocator [alpha proteobacterium BAL199] Length = 517 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 177/350 (50%), Gaps = 24/350 (6%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 ++ K++ + A + + S +Y+ + I+ YVM WGL+I+VG GLL L Sbjct: 159 DQVRKLVKVFAAIAVVFALTLPFLPFSNRYVIDVATLIVTYVMLGWGLNIIVGYAGLLDL 218 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 V YA+GAYSY + G+S WL +P + +++ + G+I+G P L+ RGDY AI TL Sbjct: 219 GFVAFYAVGAYSYALAAQHLGISFWLALPFAGLLAASFGLILGFPVLRLRGDYFAIVTLG 278 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGT---------TVRSLIRFFRFPSSFVIY 179 EI + +LI W +TNG GI R F G + +F S Sbjct: 279 FGEIVRIVLINWYDVTNGPDGISGIPRPDFFGLASMTRNGSDGLPPFHEYFGLEYSSEHR 338 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 IF+YY+++ M L A + +R+ I AW +R++ A SL KL+AF +S+ Sbjct: 339 IIFLYYLIVAMAALVALFTVRIRKLPIGRAWEALREDDIACASLGINRTTIKLAAFGISA 398 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A+ G AGAFFA + ISP+ F F E+ I+++IV++GGM SL IA A +LIG+ E+ Sbjct: 399 AWGGFAGAFFATRQGFISPESFTFIESAIILAIVVMGGMGSLVGIAIAALLLIGLPEVFR 458 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + Y L ++++ R LL R PS L Sbjct: 459 DLAEY---------------RMVAFGAGLVMIMIWRPRGLLSHREPSVLL 493 >gi|209550647|ref|YP_002282564.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536403|gb|ACI56338.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 463 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 130/346 (37%), Positives = 201/346 (58%), Gaps = 6/346 (1%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + KI + ++YP+++ G S Y+D+ GIQILIYVM AWGL+IVVG GLL L Sbjct: 105 RHFLKIALIALLLYPMVVVAIKGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 V YA+GAYSY +L S +GLS W+L+P+S + + G+I+G P L+ RGDYLAI TL Sbjct: 165 GYVAFYAVGAYSYALLSSHFGLSFWVLLPLSGIFAALWGVILGFPVLRLRGDYLAIVTLA 224 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184 EI + +LI W +T G GI ++ G + F S Y+IF++ Sbjct: 225 FGEIIRLVLINWTDVTKGTFGISSIPKVTLFGIPFDATAGGFAKLFHLSMSSAYYKIFLF 284 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++L +C L+A + + LRR I AW +R+++ A SL + KL+AFA + F G Sbjct: 285 YLILALCMLTAYVTIQLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFAGF 344 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+FFAA + +SP+ F F E+ ++++IV+LGGM SL+ IA A +++G EL M+ Sbjct: 345 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAAIVMVGGTELLREMD-- 402 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + + + +A+ +V+L + + R P+ FL+ Sbjct: 403 FLKVIFGPTFTPELYRMLIFGLAMVVVMLFKPRGFVGSREPTAFLK 448 >gi|217978236|ref|YP_002362383.1| inner-membrane translocator [Methylocella silvestris BL2] gi|217503612|gb|ACK51021.1| inner-membrane translocator [Methylocella silvestris BL2] Length = 456 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 122/350 (34%), Positives = 198/350 (56%), Gaps = 7/350 (2%) Query: 7 RLNKYDKILCLLAVV-YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 RL +Y + +LA++ +PL++ LG +QK+ID+ G+QIL+YV+ WGL+IVVG GL Sbjct: 95 RLARYAGAVGILALIAFPLVMVALLGPAGAQKWIDNFGVQILLYVLLGWGLNIVVGLAGL 154 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L L V YA+GAY+Y +L + +G S WL +PV+ +++ G+ +GLP L+ RGDYLAI Sbjct: 155 LDLGYVAFYAVGAYAYALLATHFGWSFWLCLPVAGLLAAGFGVALGLPVLRLRGDYLAIV 214 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEI 181 T+ EI + +L W +TNG AGI R+ F G F + V I Sbjct: 215 TMAFGEIIRLVLTNWTALTNGDAGISSIPRITFFGWPFIAGPNGFAALFGLKFAPVHRLI 274 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 F++Y++L + + LR+ + A+ +R+++ A SL + KL+AFA+ ++ Sbjct: 275 FLFYLILALALCVNYLTRRLRKAPLGRAFEALREDEIACRSLGVDTVATKLTAFALGASI 334 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 GMAGA FAA ++ +SP F F E+ ++++V+LGG S +A A ++IG E+ + Sbjct: 335 AGMAGALFAARQNFVSPTSFTFMESATILALVVLGGAGSQLGVALAAIVIIGGSEILREL 394 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + ++ IA+ ++ R L+ LRTPS FL++ Sbjct: 395 DG--LKQIFGPAFDPTQYRMLIVGIAMVGMMNWRPRGLIALRTPSIFLKK 442 >gi|222149578|ref|YP_002550535.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] gi|221736560|gb|ACM37523.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] Length = 463 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 133/345 (38%), Positives = 203/345 (58%), Gaps = 6/345 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + KI + ++YP ++ +G S KY+D+ GIQILIYVM AWGL+IVVG GLL L Sbjct: 107 FLKIALVALILYPPVILFLVGTQGSLKYVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGY 166 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY +L +GLS WLL+P+S +++ G+++G P L+ RGDYLAI TL Sbjct: 167 VAFYAVGAYSYALLSQHFGLSFWLLLPISGILAAFWGIMLGFPVLRLRGDYLAIVTLAFG 226 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G G+ + G + F P S Y+IF++Y+ Sbjct: 227 EIIRLVLINWTDVTQGTFGVSGIPKATLFGIPFDASAHGFAKTFGLPMSSAYYKIFLFYL 286 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 LG+C L+A + + LRR I AW +R+++ A SL + KL+AFA+ + F G AG Sbjct: 287 ALGLCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGIDTVKTKLTAFAIGAMFGGFAG 346 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + +SP+ F F E+ ++++IV+LGGM SL+ IA A +++G EL M + Sbjct: 347 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAVAAIVMVGGTELLREME--FL 404 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + D + + L +A+ +V+L + + R P+ FL+ Sbjct: 405 KHVFGPDFTPELYRMLLFGLAMIVVMLFKPRGFVGSREPTAFLKE 449 >gi|258592151|emb|CBE68456.1| ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter); putative branched-chain amino acid transport protein [NC10 bacterium 'Dutch sediment'] Length = 696 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 100/345 (28%), Positives = 166/345 (48%), Gaps = 36/345 (10%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R+++ L A + +Y + Q+ IY A GL+IVVG GLL Sbjct: 91 RIDRRLLYLMAFAAAVVI-------PLGLNRYYIDVLTQVGIYATLALGLNIVVGLAGLL 143 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 +L + YA+GAY+Y +L +R +S W ++P+ +++ G+++G P+L+ RGDYLAI T Sbjct: 144 NLGYIAFYAVGAYAYGLLATRADVSFWQVLPLGGVLAAVFGVLLGFPALRLRGDYLAIVT 203 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L E+ + +L W +T G GI R G T I YY+ Sbjct: 204 LGFGEMIRIVLNNWDSLTGGPNGIIGITRPSLFGFTFSH--------------PIHYYYL 249 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+ + L ++ + AW +RD++ A ++ ++ KL AF + + + G+AG Sbjct: 250 ILAVVLLTIFSVDRLNQSRLGRAWTAMRDDEVAAEAIGIDLVKTKLLAFGLGATWAGLAG 309 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FFA+ ISP+ F F E++IV+ +V LGGM S+ + A+L+ + EL Y Sbjct: 310 VFFASKMTFISPESFTFFESVIVLCMVTLGGMGSIPGVILGAALLLILPELMRQFALY-- 367 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + A+ +++MR LL R + L R Sbjct: 368 -------------RMLVFGAAMVGMMVMRPKGLLTARRRTVPLWR 399 >gi|90420912|ref|ZP_01228817.1| permease componenet of ABC branched-chain amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90334887|gb|EAS48659.1| permease componenet of ABC branched-chain amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 486 Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats. Identities = 105/329 (31%), Positives = 173/329 (52%), Gaps = 6/329 (1%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 L +Y+ + I IL YVM WGL+IVVG GLL L V YA+GAYS+ +L + Sbjct: 145 LLATLVPSQNRYLLDLAILILTYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYSFALLST 204 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W+ +P++ + + G+++G P L+ RGDYLAI TL EI + +L+ W T G Sbjct: 205 NFGLGFWVCLPMAGLFAAMWGVMLGFPVLRLRGDYLAIVTLAFGEIIRIVLLNWYEFTGG 264 Query: 147 KAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 G+ + G S +F V +F+YY++L + ++ + L LR Sbjct: 265 PNGLLGIPKPTLFGLEFNRGDNSFAEYFNLEYDTVQRFVFLYYIILALALITNFVTLRLR 324 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + AW +R+++ A SL KL+AFA + F G AGAFFA + ISP+ F Sbjct: 325 KLPVGRAWEALREDEIACRSLGINTTNVKLTAFATGAMFGGFAGAFFATRQGFISPESFT 384 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ I+++IV+LGG+ S + A+ ++IG +EL + ++ D Sbjct: 385 FIESAIILAIVVLGGLGSQLGVVIASVVMIGGIELLRNLT--ILQAVFGSDFDPTQYRML 442 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +A+ +++ + L+ R+PS+ + Sbjct: 443 IFGLAMVAIMVWKPRGLISSRSPSDVYKE 471 >gi|110635652|ref|YP_675860.1| inner-membrane translocator [Mesorhizobium sp. BNC1] gi|110286636|gb|ABG64695.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Chelativorans sp. BNC1] Length = 484 Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats. Identities = 103/340 (30%), Positives = 170/340 (50%), Gaps = 6/340 (1%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L L F + + I I+ Y+M WGL+IVVG GLL L V YA Sbjct: 132 ALFIFALALPFFFTTFFPGRDRQFIDLAILIMTYIMLGWGLNIVVGLAGLLDLGYVAFYA 191 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAYS+ +L + + W +P++ +++ G+I+G P L+ RGDYLAI TL EI + Sbjct: 192 VGAYSFALLAQHFEIGFWAALPLAGLLAAFWGIILGFPVLRLRGDYLAIVTLAFGEIIRI 251 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 +L+ W T G GI + F G + FF + I++YY++ + Sbjct: 252 VLLNWYSFTGGPNGISGIPKPTFFGLELGRGDDGFAAFFGIEYDPIQRFIYLYYIIFALA 311 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ + L LR+ I AW +R+++ A SL KL+AFA+ + F G AG+FFA Sbjct: 312 LLTNLVTLRLRKLPIGRAWEALREDEIACRSLGINTRNTKLTAFAIGAMFGGFAGSFFAT 371 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ISP+ F F E+ ++++IV+LGG+ S I A+ ++IG +E+ + + + Sbjct: 372 RQGFISPESFTFIESAMILAIVVLGGLGSQLGIVIASIVMIGGIEMLRNLG--FLTQIFG 429 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +A+ L+++ + L+ R P+ L Sbjct: 430 PGFDPVQYRMLIFGLAMVLIMVWKPRGLVTTREPTAALRE 469 >gi|153008447|ref|YP_001369662.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] gi|151560335|gb|ABS13833.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] Length = 460 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 129/345 (37%), Positives = 199/345 (57%), Gaps = 6/345 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ FLG S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 104 FSRLGVAFLFVYPVLIVTFLGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 163 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY +L + +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 164 VAFYAVGAYSYALLSAYFGLSFWMLLPIAGILAATWGVILGFPVLRLRGDYLAIVTLAFG 223 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G G+ + F G F S Y+ F+YYV Sbjct: 224 EIIRLVLINWTDVTRGTFGVSGIAKATFFGLPFNASKDGFAAHFGLTFSAAHYKFFLYYV 283 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 284 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 343 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + +SP+ F F E+ ++++IV+LGGM SL IA A ++IG E+ M+ + Sbjct: 344 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 401 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ D + + + +A+ +V++ + + R PS FL Sbjct: 402 KAIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFLHE 446 >gi|15966237|ref|NP_386590.1| high-affinity branched-chain amino acid transport permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307308588|ref|ZP_07588290.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] gi|307317366|ref|ZP_07596806.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|15075507|emb|CAC47063.1| ABC-type branched-chain amino acid transport system, permease component [Sinorhizobium meliloti 1021] gi|306896955|gb|EFN27701.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|306900988|gb|EFN31597.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] Length = 461 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 125/345 (36%), Positives = 199/345 (57%), Gaps = 6/345 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + KI +L ++YP ++ +G S K++D+ GIQILIYVM AWGL+IVVG GLL L Sbjct: 105 WSKIAVILLLIYPPVIVALVGVQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGY 164 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY +L S +GLS W+L+P++ +++ G+++G P L+ RGDYLAI TL Sbjct: 165 VAFYAVGAYSYALLSSYFGLSFWVLLPIAGLLAACWGVVLGFPVLRLRGDYLAIVTLAFG 224 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G G+ + G P S Y+IF++Y+ Sbjct: 225 EIIRLVLINWTEVTKGTFGVSGIAKATLFGIKFDATKDGFAAMMGLPMSSAYYKIFLFYL 284 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +LG+ L+A + + LRR I AW +R+++ A SL + KL+AFA + F G AG Sbjct: 285 ILGLALLTAFVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGFAG 344 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFA + +SP+ F F E+ ++++IV+LGGM SL+ IA A ++IG E+ + + Sbjct: 345 SFFAVRQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAAVVMIGGTEILRELT--FL 402 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + + +A+ +V++ + + R P+ FL Sbjct: 403 KMIFGPTFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPTAFLRE 447 >gi|239832869|ref|ZP_04681198.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301] gi|239825136|gb|EEQ96704.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301] Length = 460 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 130/347 (37%), Positives = 199/347 (57%), Gaps = 6/347 (1%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + ++ VYP+L+ FLG S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 102 RHFSRLGVAFLFVYPILIVAFLGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDL 161 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 V YA+GAYSY +L S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 162 GYVAFYAVGAYSYALLSSYFGLSFWMLLPIAGILAATWGVILGFPVLRLRGDYLAIVTLA 221 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMY 184 EI + +LI W +T G G+ + F G +F S Y+ F+Y Sbjct: 222 FGEIIRLVLINWTDVTRGTFGVSGIAKATFFGLPFNASKDGFAAYFGLTFSAAHYKFFLY 281 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 YV+L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G Sbjct: 282 YVILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGF 341 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+FFAA + +SP+ F F E+ ++++IV+LGGM SL IA A ++IG E+ M Sbjct: 342 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMG-- 399 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + ++ D + + + +A+ +V++ + + R PS FL Sbjct: 400 FLKAVFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFLHE 446 >gi|312113602|ref|YP_004011198.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100] gi|311218731|gb|ADP70099.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100] Length = 532 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 117/327 (35%), Positives = 176/327 (53%), Gaps = 20/327 (6%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 L A SQ+Y QILIYVM WGL+IVVG GLL L V YA+GAY+Y ++ ++ Sbjct: 205 PMLTAGPSQRYAIDTATQILIYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYTYALISTQ 264 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 +G S W+ +P++ + G+ +G P L+ RGDYLAI T+ EI + +L+ W+ +T G Sbjct: 265 FGWSFWVCLPLAGFFAALWGITLGFPVLRLRGDYLAIVTMAFGEIVRIVLLNWQSLTGGP 324 Query: 148 AGIYVADRLYFLGTTV-----RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 GI +L F G + F + +F+YYV+L + L+ I L LR Sbjct: 325 NGINKIPKLTFFGLPFERTGDGTFASVFGLKFDPLHRMLFLYYVILALALLTNFITLRLR 384 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R I AW +R+++ A S+ + KL+AFA+ + F G AG+FFAA + ISP+ F Sbjct: 385 RLPIGRAWEALREDEIACRSVGINTVTTKLTAFAIGAMFGGFAGSFFAARQGFISPESFT 444 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ +V++IV+LGG+ S + A ILIG E + + Sbjct: 445 FMESALVLAIVVLGGLGSQLGVVIAAVILIGSAERFRDLEDF---------------RML 489 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFL 349 + +++ LV++ R L+ RTPS FL Sbjct: 490 IFGLSMVLVMIWRPRGLMSGRTPSAFL 516 >gi|254719778|ref|ZP_05181589.1| inner-membrane translocator [Brucella sp. 83/13] gi|265984798|ref|ZP_06097533.1| inner-membrane translocator [Brucella sp. 83/13] gi|306839475|ref|ZP_07472283.1| inner-membrane translocator [Brucella sp. NF 2653] gi|264663390|gb|EEZ33651.1| inner-membrane translocator [Brucella sp. 83/13] gi|306405420|gb|EFM61691.1| inner-membrane translocator [Brucella sp. NF 2653] Length = 459 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 131/343 (38%), Positives = 197/343 (57%), Gaps = 6/343 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ LG S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY IL S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G GI + F G F S Y+ F+YYV Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLTFSAAHYKFFLYYV 282 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + +SP+ F F E+ ++++IV+LGGM SL IA A ++IG E+ M+ + Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + D + + + +A+ +V++ + + R PS FL Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443 >gi|289522970|ref|ZP_06439824.1| branched-chain amino acid ABC transporter, permease protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503513|gb|EFD24677.1| branched-chain amino acid ABC transporter, permease protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 589 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 30/323 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 ++ S Y + +Y + L+IV+G GL L YAIGAY I Sbjct: 2 VIALFLAFPFFSNFYWIDVAFFFGVYALLGLSLNIVLGETGLFDLGHAAFYAIGAYVTAI 61 Query: 84 LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ-NILIKWKP 142 L + YG+ I LIP+SA+ +G I+ P + RGDYL I T+ + EI + ++ Sbjct: 62 LNTLYGIPIVWLIPLSALCAGFFAYIVTSPIIHLRGDYLCIVTIGIGEIVRLALINNPFG 121 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G GI R F + + +RF Y+ + + + ++ L+ Sbjct: 122 LTGGPNGITGIGRPSFGLFAIDTSMRF--------------YFYVWIILAIVILGLVRLQ 167 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I AW +R+++ A + KL +F + +A G+AG +A+ +SPD F Sbjct: 168 RSRIGRAWNYLREDEIAAEMSGIDVRHFKLLSFVLGAALAGVAGNIYASKLMIVSPDTFT 227 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ ++ IV+LGG+ S+ I+ E+ + Y Sbjct: 228 FMESSMLFCIVMLGGLGSIPGSILGAGIITVFPEIFRVVANY---------------RML 272 Query: 323 LMVIALFLVILMRSHSLLRLRTP 345 AL L ++ R L + Sbjct: 273 FFGGALVLAMIFRPGGLWPRKRE 295 >gi|317122640|ref|YP_004102643.1| ABC transporter [Thermaerobacter marianensis DSM 12885] gi|315592620|gb|ADU51916.1| ABC transporter related protein [Thermaerobacter marianensis DSM 12885] Length = 897 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 68/325 (20%), Positives = 126/325 (38%), Gaps = 20/325 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ +LL+ L S+ + I +Y+ GLS++ G G +SL Y + Sbjct: 8 VIGAAVGILLWASLPYGVGDLLSLSVFVLIALYIPIVVGLSVLSGYTGQVSLGQAAFYGL 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY IL + WL IP + ++G +G P L RG YL +ATL ++ I + + Sbjct: 68 GAYLTAILSTHLDWKPWLSIPTAVALTGLIAYGIGRPILVLRGHYLVVATLGLNIIVEVL 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + +T G +G+ L +R YY + + + Sbjct: 128 IRELHGLTGGPSGLSGIPPLAAGSMVLRGDR--------------AYYYAASLLAAGAVA 173 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L R+ + A + I ++ A +L K FA S+ +G +A + Sbjct: 174 ASALLIRSRVGRALQAIATSETAAETLGIDAASYKARVFAWSAVLAAASGCLYAHYVGYL 233 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F F+ ++ ++ + ++GG+ SL +AI + + E + Sbjct: 234 SPSPFSFNFSVELLVMAVIGGLASLPGAVVGSAITVLLREQLRTIISGLAGGAGA----- 288 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L V++ L Sbjct: 289 -EYEVVIYGLILAAVVIFAPDGLWP 312 >gi|256370195|ref|YP_003107706.1| branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|256000358|gb|ACU48757.1| branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] Length = 459 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 130/343 (37%), Positives = 196/343 (57%), Gaps = 6/343 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ LG S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY IL S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G GI + F G F S Y+ F+YYV Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFA + +SP+ F F E+ ++++IV+LGGM SL IA A ++IG E+ M+ + Sbjct: 343 SFFATRQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + D + + + +A+ +V++ + + R PS FL Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443 >gi|256114355|ref|ZP_05455088.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] gi|265995655|ref|ZP_06108212.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] gi|262766939|gb|EEZ12557.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] Length = 459 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 131/343 (38%), Positives = 197/343 (57%), Gaps = 6/343 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ LG S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY IL S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G GI + F G F S Y+ F+YYV Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + +SP+ F F E+ ++++IV+LGGM SL IA A ++IG E+ M+ + Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + D + + + +A+ +V++ + + R PS FL Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443 >gi|17986543|ref|NP_539177.1| high-affinity branched-chain amino acid transport system permease protein LIVM [Brucella melitensis bv. 1 str. 16M] gi|62290656|ref|YP_222449.1| branched-chain amino acid ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|82700570|ref|YP_415144.1| inner-membrane translocator [Brucella melitensis biovar Abortus 2308] gi|148559528|ref|YP_001259630.1| branched-chain amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|189024868|ref|YP_001935636.1| inner-membrane translocator [Brucella abortus S19] gi|225628347|ref|ZP_03786381.1| high-affinity branched-chain amino acid transport system permease protein LIVM [Brucella ceti str. Cudo] gi|225853236|ref|YP_002733469.1| inner-membrane translocator [Brucella melitensis ATCC 23457] gi|237816157|ref|ZP_04595152.1| high-affinity branched-chain amino acid transport system permease protein LIVM [Brucella abortus str. 2308 A] gi|254694436|ref|ZP_05156264.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] gi|254698095|ref|ZP_05159923.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] gi|254700436|ref|ZP_05162264.1| inner-membrane translocator [Brucella suis bv. 5 str. 513] gi|254708357|ref|ZP_05170185.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10] gi|254708791|ref|ZP_05170602.1| inner-membrane translocator [Brucella pinnipedialis B2/94] gi|254714633|ref|ZP_05176444.1| inner-membrane translocator [Brucella ceti M644/93/1] gi|254717531|ref|ZP_05179342.1| inner-membrane translocator [Brucella ceti M13/05/1] gi|254730979|ref|ZP_05189557.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|256030317|ref|ZP_05443931.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1] gi|256160488|ref|ZP_05458177.1| inner-membrane translocator [Brucella ceti M490/95/1] gi|256255694|ref|ZP_05461230.1| inner-membrane translocator [Brucella ceti B1/94] gi|256258199|ref|ZP_05463735.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68] gi|256263276|ref|ZP_05465808.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2 str. 63/9] gi|260167991|ref|ZP_05754802.1| inner-membrane translocator [Brucella sp. F5/99] gi|260547107|ref|ZP_05822845.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038] gi|260565720|ref|ZP_05836203.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1 str. 16M] gi|260758703|ref|ZP_05871051.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|260762537|ref|ZP_05874874.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] gi|260884500|ref|ZP_05896114.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68] gi|261214751|ref|ZP_05929032.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] gi|261219366|ref|ZP_05933647.1| inner-membrane translocator [Brucella ceti M13/05/1] gi|261222905|ref|ZP_05937186.1| inner-membrane translocator [Brucella ceti B1/94] gi|261315855|ref|ZP_05955052.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10] gi|261316285|ref|ZP_05955482.1| inner-membrane translocator [Brucella pinnipedialis B2/94] gi|261322428|ref|ZP_05961625.1| inner-membrane translocator [Brucella ceti M644/93/1] gi|261750937|ref|ZP_05994646.1| inner-membrane translocator [Brucella suis bv. 5 str. 513] gi|261757436|ref|ZP_06001145.1| bacterial inner-membrane translocator [Brucella sp. F5/99] gi|265987351|ref|ZP_06099908.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1] gi|265998864|ref|ZP_06111421.1| inner-membrane translocator [Brucella ceti M490/95/1] gi|297249049|ref|ZP_06932757.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|306841502|ref|ZP_07474202.1| inner-membrane translocator [Brucella sp. BO2] gi|17982149|gb|AAL51441.1| high-affinity branched-chain amino acid transport system permease protein livm [Brucella melitensis bv. 1 str. 16M] gi|62196788|gb|AAX75088.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82616671|emb|CAJ11754.1| Bacterial inner-membrane translocator [Brucella melitensis biovar Abortus 2308] gi|148370785|gb|ABQ60764.1| branched-chain amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] gi|189020440|gb|ACD73162.1| Bacterial inner-membrane translocator [Brucella abortus S19] gi|225616193|gb|EEH13241.1| high-affinity branched-chain amino acid transport system permease protein LIVM [Brucella ceti str. Cudo] gi|225641601|gb|ACO01515.1| inner-membrane translocator [Brucella melitensis ATCC 23457] gi|237788619|gb|EEP62832.1| high-affinity branched-chain amino acid transport system permease protein LIVM [Brucella abortus str. 2308 A] gi|260095472|gb|EEW79350.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038] gi|260151093|gb|EEW86188.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1 str. 16M] gi|260669021|gb|EEX55961.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|260672963|gb|EEX59784.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] gi|260874028|gb|EEX81097.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68] gi|260916358|gb|EEX83219.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] gi|260921489|gb|EEX88142.1| inner-membrane translocator [Brucella ceti B1/94] gi|260924455|gb|EEX91023.1| inner-membrane translocator [Brucella ceti M13/05/1] gi|261295118|gb|EEX98614.1| inner-membrane translocator [Brucella ceti M644/93/1] gi|261295508|gb|EEX99004.1| inner-membrane translocator [Brucella pinnipedialis B2/94] gi|261304881|gb|EEY08378.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10] gi|261737420|gb|EEY25416.1| bacterial inner-membrane translocator [Brucella sp. F5/99] gi|261740690|gb|EEY28616.1| inner-membrane translocator [Brucella suis bv. 5 str. 513] gi|262553553|gb|EEZ09322.1| inner-membrane translocator [Brucella ceti M490/95/1] gi|263093241|gb|EEZ17338.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2 str. 63/9] gi|264659548|gb|EEZ29809.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1] gi|297174182|gb|EFH33539.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|306288466|gb|EFM59822.1| inner-membrane translocator [Brucella sp. BO2] gi|326409794|gb|ADZ66859.1| Bacterial inner-membrane translocator [Brucella melitensis M28] gi|326539510|gb|ADZ87725.1| inner-membrane translocator [Brucella melitensis M5-90] Length = 459 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 131/343 (38%), Positives = 197/343 (57%), Gaps = 6/343 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ LG S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY IL S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G GI + F G F S Y+ F+YYV Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + +SP+ F F E+ ++++IV+LGGM SL IA A ++IG E+ M+ + Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + D + + + +A+ +V++ + + R PS FL Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443 >gi|256061815|ref|ZP_05451950.1| inner-membrane translocator [Brucella neotomae 5K33] gi|261325819|ref|ZP_05965016.1| inner-membrane translocator [Brucella neotomae 5K33] gi|261301799|gb|EEY05296.1| inner-membrane translocator [Brucella neotomae 5K33] Length = 459 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 130/343 (37%), Positives = 197/343 (57%), Gaps = 6/343 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ LG S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY +L S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 163 VAFYAVGAYSYAMLSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G GI + F G F S Y+ F+YYV Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + +SP+ F F E+ ++++IV+LGGM SL IA A ++IG E+ M+ + Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + D + + + +A+ +V++ + + R PS FL Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443 >gi|256045387|ref|ZP_05448281.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1] gi|265991816|ref|ZP_06104373.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1] gi|263002772|gb|EEZ15175.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1] Length = 459 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 130/343 (37%), Positives = 196/343 (57%), Gaps = 6/343 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ LG S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY IL S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G GI + F G F S Y+ F+YYV Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + +SP+ F E+ ++++IV+LGGM SL IA A ++IG E+ M+ + Sbjct: 343 SFFAARQGFVSPESFVLLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + D + + + +A+ +V++ + + R PS FL Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443 >gi|254689944|ref|ZP_05153198.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870] gi|260755480|ref|ZP_05867828.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870] gi|260675588|gb|EEX62409.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870] Length = 459 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 130/343 (37%), Positives = 196/343 (57%), Gaps = 6/343 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ LG S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY IL S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G GI + F G F S Y+ F+YYV Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + +SP+ F F E+ ++++ V+LGGM SL IA A ++IG E+ M+ + Sbjct: 343 SFFAARQGFVSPESFVFLESAVILANVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + D + + + +A+ +V++ + + R PS FL Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443 >gi|227823057|ref|YP_002827029.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] gi|227342058|gb|ACP26276.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] Length = 461 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 124/345 (35%), Positives = 197/345 (57%), Gaps = 6/345 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + KI L V+YP ++ +G S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 105 FSKIAILALVLYPPVIIALVGVQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 164 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY +L S +GLS W+L+PV+ +++ G+++G P L+ RGDYLAI TL Sbjct: 165 VAFYAVGAYSYALLSSYFGLSFWVLLPVAGILAACWGVVLGFPVLRLRGDYLAIVTLAFG 224 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G G+ + G P S Y+IF++Y+ Sbjct: 225 EIIRLVLINWTEVTKGTFGVSGIAKATLFGIKFDASKDGFAALMGLPLSSAYYKIFLFYL 284 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +LG+ L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 285 ILGLALLTAFVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 344 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFA + +SP+ F F E+ ++++IV+LGGM SL+ I A ++IG E+ + + Sbjct: 345 SFFAVRQGFVSPESFVFLESAVILAIVVLGGMGSLTGIFVAAVVMIGGTEILRELT--FL 402 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + + + +A+ +V++ + + R P+ FL Sbjct: 403 KMIFGPNFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPTAFLRE 447 >gi|170743531|ref|YP_001772186.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168197805|gb|ACA19752.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 475 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 109/325 (33%), Positives = 173/325 (53%), Gaps = 6/325 (1%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 G +Y + I +L YVM WGL+IVVG GLL L V YA+GAY+Y +L + +G Sbjct: 139 GGLNESRYWIDLAILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYTYALLSTTFGF 198 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S W+ +P++ +++ GM++G P L+ RGDYLAI TL EI + +LI W + G AGI Sbjct: 199 SFWICLPLAGLLAACWGMLLGFPVLRLRGDYLAIVTLAFGEIIRLVLINWTDFSGGAAGI 258 Query: 151 YVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 R+ F G S + +F+YY++L + L+ + L +RR + Sbjct: 259 SSIPRVTFFGLPFSADEDGFAATLGIAFSPMHRVVFLYYLILALALLTNGVTLRMRRLPL 318 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 AW +R+++ A SL KL+AFA+ + F G AG+FFA + +SP+ F F E+ Sbjct: 319 GRAWEALREDEIACRSLGINTTNTKLTAFALGAMFGGFAGSFFAVRQGFVSPESFNFLES 378 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I+++IV+LGGM S +A A ++ EL + + ++ + L + Sbjct: 379 AIILAIVVLGGMGSQIGVAIAAVAMVAGPELLRNLG--FLKAVFGEGFDPSEYRLLLFGL 436 Query: 327 ALFLVILMRSHSLLRLRTPSNFLER 351 A+ L+++ R L+ R PS L+ Sbjct: 437 AMVLMMIWRPRGLISERAPSVVLKE 461 >gi|23502644|ref|NP_698771.1| branched-chain amino acid ABC transporter permease [Brucella suis 1330] gi|161619712|ref|YP_001593599.1| inner-membrane translocator [Brucella canis ATCC 23365] gi|163845366|ref|YP_001623021.1| hypothetical protein BSUIS_B1266 [Brucella suis ATCC 23445] gi|254703556|ref|ZP_05165384.1| hypothetical protein Bsuib36_06464 [Brucella suis bv. 3 str. 686] gi|261754191|ref|ZP_05997900.1| inner-membrane translocator [Brucella suis bv. 3 str. 686] gi|23348651|gb|AAN30686.1| branched-chain amino acid ABC transporter, permease protein [Brucella suis 1330] gi|161336523|gb|ABX62828.1| inner-membrane translocator [Brucella canis ATCC 23365] gi|163676089|gb|ABY40199.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|261743944|gb|EEY31870.1| inner-membrane translocator [Brucella suis bv. 3 str. 686] Length = 459 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 129/343 (37%), Positives = 196/343 (57%), Gaps = 6/343 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ LG S +++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLEWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY IL S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G I + F G F S Y+ F+YYV Sbjct: 223 EIIRLVLINWTDLTRGTFDISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + +SP+ F F E+ ++++IV+LGGM SL IA A ++IG E+ M+ + Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + D + + + +A+ +V++ + + R PS FL Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443 >gi|260568863|ref|ZP_05839331.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40] gi|260154247|gb|EEW89329.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40] Length = 459 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 129/343 (37%), Positives = 196/343 (57%), Gaps = 6/343 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ LG S +++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLEWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY IL S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + +LI W +T G I + F G F S Y+ F+YYV Sbjct: 223 EIIRLVLINWTDLTRGTFDISGIAKATFFGLPFNASKDGFAAHFGLAFSAARYKFFLYYV 282 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + +SP+ F F E+ ++++IV+LGGM SL IA A ++IG E+ M+ + Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + D + + + +A+ +V++ + + R PS FL Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443 >gi|306844771|ref|ZP_07477356.1| inner-membrane translocator [Brucella sp. BO1] gi|306274943|gb|EFM56713.1| inner-membrane translocator [Brucella sp. BO1] Length = 459 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 132/343 (38%), Positives = 197/343 (57%), Gaps = 6/343 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ LG S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY IL S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186 EI + ILI W +T G GI + F G F S Y+ F+YYV Sbjct: 223 EIIRLILINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + +SP+ F F E+ ++++IV+LGGM SL IA A ++IG E+ M+ + Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + D + + + +A+ +V++ + + R PS FL Sbjct: 401 KMIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443 >gi|325293776|ref|YP_004279640.1| branched chain amino acid ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325061629|gb|ADY65320.1| branched chain amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 465 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 129/329 (39%), Positives = 191/329 (58%), Gaps = 8/329 (2%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 G S K++D+ GIQILIYVM AWGL+IVVG GLL L V YA+GAYSY +L S Sbjct: 125 LFGFQGSLKFVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGAYSYALLSSHL 184 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 GLS W+L+PV+ +++G G+I+G P L+ RGDYLAI TL EI + +L+ W +T G Sbjct: 185 GLSFWVLLPVAGILAGFWGIILGFPVLRLRGDYLAIVTLAFGEIIRLVLLNWTDVTKGTF 244 Query: 149 GIYVADRLYFLGTT------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 GI + G + + F S Y+IF++YV+L +C L+A + + LR Sbjct: 245 GISGIAKASIFGIWSFDVGAPNNFAKAFGLTMSSAYYKIFLFYVILLLCMLTAYVTIKLR 304 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R I AW +R+++ A SL + KL+AFA + F G AG+FFAA + +SP+ F Sbjct: 305 RMPIGRAWEALREDEIACRSLGIDTVITKLTAFATGAMFGGFAGSFFAARQGFVSPESFV 364 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ ++++IV+LGGM SL+ IA A +++G EL M + + D + + Sbjct: 365 FLESAVILAIVVLGGMGSLTGIAIAALVMVGGTELLREME--FLKHVFGPDFTPELYRML 422 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351 L +A+ +V+L + + R P+ FL Sbjct: 423 LFGLAMVIVMLFKPRGFVGSREPTAFLRE 451 >gi|15889696|ref|NP_355377.1| ABC transporter, membrane spanning protein (branched chain amino acid) [Agrobacterium tumefaciens str. C58] gi|15157604|gb|AAK88162.1| ABC transporter, membrane spanning protein (branched chain amino acid) [Agrobacterium tumefaciens str. C58] Length = 465 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 133/347 (38%), Positives = 203/347 (58%), Gaps = 8/347 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + K +L ++YP++ G S K++D+ GIQILIYVM AWGL+IVVG GLL L Sbjct: 107 FLKFALVLLLLYPVIAVQLFGFQGSLKFVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGY 166 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY +L S++GLS W+L+PV+ +++G G+I+G P L+ RGDYLAI TL Sbjct: 167 VAFYAVGAYSYALLSSQFGLSFWVLLPVAGILAGFWGVILGFPVLRLRGDYLAIVTLAFG 226 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTT------VRSLIRFFRFPSSFVIYEIFMY 184 EI + +L+ W +T G GI + G + + F S Y+IF++ Sbjct: 227 EIIRLVLLNWTAVTKGTFGISGIAKASVFGIWSFDVGAPNNFAKVFGLSMSSAYYKIFLF 286 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 YV+L +C L+A + + LRR I AW +R+++ A SL + KL+AFA + F G Sbjct: 287 YVILLLCMLTAYVTIKLRRMPIGRAWEALREDEIACRSLGIDTVITKLTAFATGAMFGGF 346 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+FFAA + +SP+ F F E+ ++++IV+LGGM SL+ IA A +++G EL M Sbjct: 347 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAALVMVGGTELLREME-- 404 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + D + + L +A+ +V+L + + R P+ FL Sbjct: 405 FLKHVFGPDFTPELYRMLLFGLAMVIVMLFKPRGFVGSREPTAFLRE 451 >gi|170748668|ref|YP_001754928.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] gi|170655190|gb|ACB24245.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] Length = 464 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 123/342 (35%), Positives = 185/342 (54%), Gaps = 6/342 (1%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + +A+ P++ L G S +Y +GI IL YVM WGL+IVVG GLL L V Sbjct: 109 LWLFIFVALTLPMISALATGGLSSARYWIDLGILILTYVMLGWGLNIVVGLAGLLDLGYV 168 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 YA+GAYSY +L + +GLS W+ +P++ + +G GMI+G P L+ RGDYLAI TL E Sbjct: 169 AFYAVGAYSYALLSTTFGLSFWVCLPLAGLFAGLWGMILGFPVLRLRGDYLAIVTLAFGE 228 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVL 187 I + +LI W +T G AGI R F G F P + +F+YY++ Sbjct: 229 IIRLVLINWTDVTGGGAGISSIPRATFFGIPFTAGEGGFAATFGIPYDSMHRLVFLYYLI 288 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + ++ + L LRR I AW +R+++ A SL KL+AFA+ +AF G AG+ Sbjct: 289 LALALITNFVTLRLRRLPIGRAWEALREDEIACRSLGIDTTATKLTAFALGAAFGGFAGS 348 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 FFA + ISP+ F F E+ I+++IV+LGGM S +A A ++G E+ + + Sbjct: 349 FFAVRQGFISPESFNFLESAIILAIVVLGGMGSQVGVAIAAVAMVGGPEMLRNLG--FLK 406 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 ++ + L +A+ +++ R L+ R PS L Sbjct: 407 AVFGEGFDPSEYRLLLFGLAMVAMMVWRPRGLISERMPSVSL 448 >gi|224370454|ref|YP_002604618.1| ABC-type branched-chain amino acid transport system, permease component [Desulfobacterium autotrophicum HRM2] gi|223693171|gb|ACN16454.1| ABC-type branched-chain amino acid transport system, permease component [Desulfobacterium autotrophicum HRM2] Length = 624 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 83/329 (25%), Positives = 145/329 (44%), Gaps = 35/329 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + +++ +L + Y S+ IYVM A GL+IV G GLL L+ V + IG Sbjct: 15 VTIIFFVLALAVIPVILPNTYWQSIFSMTGIYVMLALGLNIVAGFTGLLDLSYVAFFGIG 74 Query: 78 AYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 Y++ L S + L L IPV A+ + G ++GL S++ +GDYLAI TL ++IF+ Sbjct: 75 GYTFAFLCSDHFGIHLPFLLAIPVCAITAMVAGFLLGLTSIRLKGDYLAIVTLAFAQIFK 134 Query: 135 NILIKWK---PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 +L+ IT G G+Y D + V + + ++ Sbjct: 135 LLLLNLDAPVNITGGVNGLYAFDMISVFSIKVTTPEHYST--------------LIWTCA 180 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L + + L+ + I W IR+++ A ++ KL +FA + G +GA FA+ Sbjct: 181 LLVFVVSVRLKSSRIGRGWNAIREDELAANTIGINTTRMKLYSFASGALIAGFSGALFAS 240 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 +D + P+ F F + +IV +VI+GG+ ++ + IL + E+ Sbjct: 241 FQDSVFPNSFGFQQLVIVYCMVIIGGLGNVYGVIAGAVILSILPEILREYGG-------- 292 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + L ++ +R L Sbjct: 293 -------LRMMIYGLVLVGIMAIRPQGLF 314 >gi|209965126|ref|YP_002298041.1| high-affinity branched-chain amino acid transport system permease protein LivM [Rhodospirillum centenum SW] gi|209958592|gb|ACI99228.1| high-affinity branched-chain amino acid transport system permease protein LivM [Rhodospirillum centenum SW] Length = 435 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 101/340 (29%), Positives = 163/340 (47%), Gaps = 23/340 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + S +YI +G LIYV+ GL++ VG GLL L V YAIG Sbjct: 97 FVIAGIGFAAVMPFLPFSDRYILDLGTTALIYVLLGMGLNVTVGLAGLLDLGFVAFYAIG 156 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY++ +L GL WL +P+S +++ +++ LP L+ RGDYLAI TL EI + ++ Sbjct: 157 AYTFALLAKFAGLGFWLSLPLSGLVAALFAVLLSLPILRLRGDYLAIVTLGFGEITRIVI 216 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVIYEIFMYYVLLG 189 + W+ +T G G+ R G + S S +F+Y+++L Sbjct: 217 LNWQSLTGGPNGVAGIPRPSLFGISFERRPPEGQVSFHELTGIAFSSEHRMMFLYFIILV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ + LRR I AW +R+++ A SL AK+SA+A + G+AG FF Sbjct: 277 LVLAASWAVWRLRRLPIGRAWEALREDEIACRSLGINPTAAKVSAYATGAMLGGLAGCFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +A + +SP+ F F E+ I+++IV+LGGM S + A ++ + E Y Sbjct: 337 SARQGFVSPESFTFIESAIILAIVVLGGMGSQIGVVIAALFIVLLPEFAREFADY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 L A+ L+++ R LL R P+ L Sbjct: 392 ----------RMLLFGAAMILIMVWRPGGLLSGRDPTLRL 421 >gi|13473392|ref|NP_104959.1| permease of ABC branched-chain amino acid transporter (high-affinity branched-chain amino acid transport) [Mesorhizobium loti MAFF303099] gi|14024141|dbj|BAB50745.1| permease of ABC branched-chain amino acid transporter (high-affinity branched-chain amino acid transport) [Mesorhizobium loti MAFF303099] Length = 531 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 130/343 (37%), Positives = 201/343 (58%), Gaps = 8/343 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + ++AV+ + G S K++D+ GIQILIYVM AWGL+IVVG GLL L V Y Sbjct: 177 ILVVAVLSLNAWSIAGGLQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFY 236 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAY+Y +L + YGLS W+L+P + ++ G+++G P L+ RGDYLAI TL EI + Sbjct: 237 ALGAYAYALLATHYGLSFWILLPAAGCMAALWGVLLGFPVLRLRGDYLAIVTLAFGEIIR 296 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF------PSSFVIYEIFMYYVLL 188 +LI W+ +TNG AGI ++ F G ++ +S Y+IF+YY++L Sbjct: 297 LVLINWREVTNGSAGISGIPKVSFFGLMTFNVSDPNYIAKVLHLATSSAYYKIFLYYLIL 356 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 G+C L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG+F Sbjct: 357 GLCLLTAFVTIRLRRLPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAGSF 416 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 FAA + +SP+ F F E+ I+++IV+LGGM SL IA A ++IG E ++ + Sbjct: 417 FAARQGFVSPESFVFLESAIILAIVVLGGMGSLVGIAVAAMVMIGGTEALRELD--FLKQ 474 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + D + + L +A+ +V+L + + R P+ FL+ Sbjct: 475 IFGPDFTPELYRMLLFGMAMVIVMLWKPRGFVGSREPTAFLKE 517 >gi|222086823|ref|YP_002545357.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221724271|gb|ACM27427.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 463 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 130/347 (37%), Positives = 197/347 (56%), Gaps = 8/347 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 ++K+ +VYP+L G S Y+D+ GIQILIYVM AWGL+IVVG GLL L Sbjct: 105 FNKMALAFLLVYPMLALALFGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGY 164 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY +L + +GLS W+L+P+S + + GM++G P L+ RGDYLAI TL Sbjct: 165 VAFYAVGAYSYALLSTHFGLSFWILLPLSGIFAALWGMVLGFPVLRLRGDYLAIVTLAFG 224 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF------RFPSSFVIYEIFMY 184 EI + +L W +T G GI + G + +S Y+IF++ Sbjct: 225 EIIRIVLTNWTDVTKGSFGISNITKASLFGLYTFDMKDPHNVIRTFGLSTSSAWYKIFLF 284 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 YV+L +C L+A + + LRR I AW +R+++ A SL + KL+AF+ + F G Sbjct: 285 YVILALCALTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFSTGAMFGGF 344 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+FFAA + +SP+ F F E+ ++++IV+LGGM SL IA A +IG EL M Sbjct: 345 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLKGIAIAAIAMIGGTELLRSMG-- 402 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + D + + + +A+ +V+L++ + R P+ FL+ Sbjct: 403 FLKIIFGADFTPELYRMLIFGLAMVVVMLVKPRGFVGTREPTAFLKE 449 >gi|251797606|ref|YP_003012337.1| ABC transporter [Paenibacillus sp. JDR-2] gi|247545232|gb|ACT02251.1| ABC transporter related [Paenibacillus sp. JDR-2] Length = 608 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 126/309 (40%), Gaps = 31/309 (10%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + Y+ ++ I IYV+ G++I+VG G++S+ A GAY+ + YGL+ W Sbjct: 31 TADTYMLNLFFTIGIYVIACVGMNILVGYCGIVSIGHAGLMAAGAYTSAYASTHYGLNFW 90 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L +S G ++ +P++K G YL++ T+ + LI+W +T G GI Sbjct: 91 LSALAGIAVSLIIGSLIAIPTIKAGGVYLSMITIAFGVVVHEALIRWDGVTGGPLGISGV 150 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + G T Y + + + + + +RR+A + Sbjct: 151 PKPKLGGYTFDLQSM---------------YLLAVAVAVGALILAYNIRRSAWGRSMIAT 195 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++N+ A SL + FAVS+ G+AG +A + ISPD + F ++ ++ IV Sbjct: 196 KENEIAAASLGIRKFKPQYVGFAVSAVLAGLAGTLYAHTNSFISPDTYHFQASVQLVLIV 255 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ILGG L IL+ + E+ L +F V+ Sbjct: 256 ILGGSGRLLGPIIGAIILVFLPEVL----------------EMEKLRMALYGTIMFAVLY 299 Query: 334 MRSHSLLRL 342 ++ Sbjct: 300 FLPKGIMGT 308 >gi|154247824|ref|YP_001418782.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154161909|gb|ABS69125.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 505 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 122/354 (34%), Positives = 184/354 (51%), Gaps = 20/354 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A+ YP L L G +Y +GI +L YVM WGL+IVVG GLL L V YA+G Sbjct: 138 FAIAYPFLAILLAGGLSPSRYWVDLGIYVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAVG 197 Query: 78 AYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 AY++ +L + S WL +PVS +++ G+I+G P L+ RGDY Sbjct: 198 AYTFALLSTSVPVNDFFAGHLGEGFWTAWSFWLCLPVSGLLAAFWGVILGFPVLRLRGDY 257 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFV 177 LAI TL EI + +LI W +TNG AGI + F G + + Sbjct: 258 LAIVTLAFGEIIRLVLINWVSLTNGGAGISSIPPISFFGVPFNATDEGFAAKYGLDFDSM 317 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 IF+Y+V+LG+ L+A + + LR+ + AW +R+++ A SL KL+AFA Sbjct: 318 HRIIFLYFVILGLAALTALVTIRLRQMPVGRAWEALREDEIACRSLGINTTLTKLTAFAT 377 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + F G AGAFFA +SP+ F F E+ ++++IV+LGGM S +A A +LIG +E+ Sbjct: 378 GAMFGGFAGAFFAVRVRFVSPESFTFMESAVILAIVVLGGMGSQMGVAGAAILLIGGMEM 437 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++F + L D ++ + A+ V++ R L+ R P+ FL+ Sbjct: 438 LRNLSFLKADFLFGPDFDPSLYRMLIFGFAMVAVMVWRPRGLVSSRLPTIFLKE 491 >gi|288962870|ref|YP_003453164.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288915136|dbj|BAI76620.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 498 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 116/359 (32%), Positives = 180/359 (50%), Gaps = 27/359 (7%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + R+ + + +AV + +L L + + I +GI +L Y+M WGL+IVV Sbjct: 147 MDRVAARVQHASRYIGPVAVAFAAVLPL---TPLADRMILDIGILLLTYIMLGWGLNIVV 203 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G GLL L V YA+GAYSY +L +GLS WL +P++ +++ G+++G P L+ RGD Sbjct: 204 GLAGLLDLGYVAFYAVGAYSYALLAHYFGLSFWLCLPLAGVLAACSGVLLGFPVLRLRGD 263 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT---------TVRSLIRFFR 171 Y AI TL EI + IL+ W T G GI R F G + + F Sbjct: 264 YFAIVTLGFGEIIRIILVNWYQFTGGPNGISGIPRPSFFGIADFSRSPADGMPAFHELFG 323 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 S + IF+YY++L + + L +R+ + AW +R++ A SL K Sbjct: 324 LEFSPLHRIIFLYYLILALALVVNLFTLRVRKLPLGRAWEALREDDIACASLGINRTNMK 383 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L+AFA+++ F G AG+FFA + ISP+ F F E+ I+++IV+LGGM S + AT ++ Sbjct: 384 LAAFAIAAMFGGFAGSFFATRQGFISPESFTFIESAIILAIVVLGGMGSQIGVVVATLLV 443 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 IG+ E + Y + +++L R LL R P+ L Sbjct: 444 IGLPEAFRELADY---------------RMLAFGAGMVVIMLWRPRGLLAHRDPTILLH 487 >gi|150397596|ref|YP_001328063.1| inner-membrane translocator [Sinorhizobium medicae WSM419] gi|150029111|gb|ABR61228.1| inner-membrane translocator [Sinorhizobium medicae WSM419] Length = 461 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 126/347 (36%), Positives = 201/347 (57%), Gaps = 6/347 (1%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 ++ KI ++ ++YP ++ F+G S K++D+ GIQILIYVM AWGL+IVVG GLL L Sbjct: 103 RQWPKIAVVMLLLYPPVIVSFVGVQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 162 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 V YA+GAYSY +L S +GLS W+L+PV+ +++ G+++G P L+ RGDYLAI TL Sbjct: 163 GYVAFYAVGAYSYALLSSYFGLSFWVLLPVAGLLAALWGIVLGFPVLRLRGDYLAIVTLA 222 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMY 184 EI + +LI W +T G G+ + G F P S Y+IF++ Sbjct: 223 FGEIIRLVLINWTEVTKGTFGVSGIAKATLFGIKFDASKDGFAALFDLPLSSAYYKIFLF 282 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++L + L+A + + LRR I AW +R+++ A SL + KL+AFA + F G Sbjct: 283 YLILALALLTAFVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGF 342 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+FFA + +SP+ F F E+ ++++IV+LGGM SL+ IA A ++IG E+ + Sbjct: 343 AGSFFAVRQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAAVVMIGGTEILRELT-- 400 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + + + +A+ V++ + + R P+ FL + Sbjct: 401 FLKMIFGPAFTPELYRMLIFGLAMVTVMVWKPRGFVGSREPTAFLRQ 447 >gi|238759630|ref|ZP_04620791.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia aldovae ATCC 35236] gi|238702173|gb|EEP94729.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia aldovae ATCC 35236] Length = 405 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 68 LLAAVIIIAAVTWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 127 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 128 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 187 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 188 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYLVALL 247 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 248 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 307 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 308 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 362 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 363 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 393 >gi|301631371|ref|XP_002944771.1| PREDICTED: hypothetical protein LOC100492261 [Xenopus (Silurana) tropicalis] Length = 647 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 71/334 (21%), Positives = 139/334 (41%), Gaps = 19/334 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + +L +F Y + I +Y + A L+ +GS + + +Y I Sbjct: 85 LAVAMGIVLALVFPWVLNGDSYAVHLMIIASLYAVLALALNFQLGSANIPNFATGASYGI 144 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L +G+S W+ + V+A+++ G ++GLPS++ R Y A+ T+ + + Sbjct: 145 GAYASALLAIHFGVSFWICLVVAAVVATIFGFLLGLPSMRTRDSYQALVTIAFGIVVHQL 204 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L+ ++ T G G+ F G I + + + YYV + + ++ Sbjct: 205 LMNFEW-TGGANGLVGIPTPTFFGHAFNDPITLWG---QSLPGQANFYYVAVALLGIAIV 260 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L + + AW +RD++ A + + K+ AFAV + G AG +A I Sbjct: 261 SAQRLHNSRVGLAWNALRDDEIAAHACGINVTRFKVKAFAVDAFLAGFAGTVYAFYVSFI 320 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SPD F F ++ ++++VI GGM + + +L + E + Y Sbjct: 321 SPDNFTFLVSVTIMTMVIAGGMDNALGVIVGAFLLTMLPEKLRAFSDY------------ 368 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + +++R + R + Sbjct: 369 ---RILFYGLVVIAFLIIRPRGIFPQRGRGLTMR 399 >gi|118590375|ref|ZP_01547777.1| ABC transporter permease protein [Stappia aggregata IAM 12614] gi|118436838|gb|EAV43477.1| ABC transporter permease protein [Stappia aggregata IAM 12614] Length = 444 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 109/347 (31%), Positives = 176/347 (50%), Gaps = 19/347 (5%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 +L KY + L+ V L + ++ + + I + YVM WGL+IVVG GLL Sbjct: 95 KLGKYAMPVFLILAVVLPFLLMSAYGSRGSRQYLDLAILVTTYVMLGWGLNIVVGLAGLL 154 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L V YA+GAYSY +L +G S W+ +P++ +++ G+I+G P L+ RGDYLAI T Sbjct: 155 DLGYVAFYAVGAYSYALLAQYFGFSFWICLPLAGILAAFWGIILGFPVLRLRGDYLAIVT 214 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIF 182 L EI + +L+ W T G GI R F G F + + IF Sbjct: 215 LAFGEIIRVVLLNWYDFTGGPDGISGIPRPSFFGIEFERGPGGFADTFGLEYNSIHRIIF 274 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 +YY++L M ++ + + LR+ + AW +R+++ A SL KL+AFA+ + F Sbjct: 275 LYYLILIMALVTNFVTMRLRKLPVGRAWEALREDEIACRSLGINTTHTKLTAFALGAMFG 334 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G AG+FFA + ISP+ F F E+ ++++IV+LGG+ S + A ++IG E G+ Sbjct: 335 GFAGSFFATRQGFISPESFTFIESAVILAIVVLGGLGSQIGVVIAAVVMIGGFEFFRGLE 394 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 Y + + + ++++ + L+ R PS L Sbjct: 395 EY---------------RMLVFGLLMVVIMVWKPRGLISTRMPSITL 426 >gi|212704231|ref|ZP_03312359.1| hypothetical protein DESPIG_02286 [Desulfovibrio piger ATCC 29098] gi|212672311|gb|EEB32794.1| hypothetical protein DESPIG_02286 [Desulfovibrio piger ATCC 29098] Length = 605 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 30/324 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 V+ + + + S+ Y ++ + + GL+I++G G ++L + IG Sbjct: 9 FYVLGAICVIFLIPHIVSENYWLNLLNHCCVMSIACLGLNILLGYTGQINLGQMAFVGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L +G+ +WL + A + G CG+++G+PSLK G YLA+ T+ I Q IL Sbjct: 69 AYTSALLTVTFGIPVWLGMLCGAAMGGICGVLLGVPSLKLSGHYLAVTTIGFGFIVQLIL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I W +T+G GI L G + ++F F S V+ Sbjct: 129 INWIEVTHGSDGIPQIPVLDLCGISFDDEEKYFYFSGSMVVLL--------------TWA 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRI 256 I L+ + I A +R N+ A + + K+ +F +SSA G+AGA FA I Sbjct: 175 ITRLKDSRIGRAMLAVRQNEMAASTNGINVTSCKIVSFTLSSACAGLAGAMFAHGGAHYI 234 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SPD F F ++++++++ +LGG S +L + E + Y Sbjct: 235 SPDTFSFEQSVLLLAMTVLGGDGSALGAVFGATLLTLLPESLRFLQESY----------- 283 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 A+ L+++ + Sbjct: 284 ----MMFFAAAIVLIMIYMPGGIA 303 >gi|288962484|ref|YP_003452779.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288914750|dbj|BAI76235.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 498 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 116/359 (32%), Positives = 180/359 (50%), Gaps = 27/359 (7%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + R+ + + +AV + +L L + + I +GI +L Y+M WGL+IVV Sbjct: 147 MDRVAARVQHASRYIGPVAVAFAAVLPL---TPLADRMILDIGILLLTYIMLGWGLNIVV 203 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G GLL L V YA+GAYSY +L +GLS WL +P++ +++ G+++G P L+ RGD Sbjct: 204 GLAGLLDLGYVAFYAVGAYSYALLAHYFGLSFWLCLPLAGVLAACSGVLLGFPVLRLRGD 263 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT---------TVRSLIRFFR 171 Y AI TL EI + IL+ W T G GI R F G + + F Sbjct: 264 YFAIVTLGFGEIIRIILVNWYQFTGGPNGISGIPRPSFFGIADFSRSPADGMPAFHELFG 323 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 S + IF+YY++L + + L +R+ + AW +R++ A SL K Sbjct: 324 LEFSPLHRIIFLYYLILALALVVNLFTLRVRKLPLGRAWEALREDDIACASLGINRTNMK 383 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L+AFA+++ F G AG+FFA + ISP+ F F E+ I+++IV+LGGM S + AT ++ Sbjct: 384 LAAFAIAAMFGGFAGSFFATRQGFISPESFTFIESAIILAIVVLGGMGSQIGVVVATLLV 443 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 IG+ E + Y + +++L R LL R P+ L Sbjct: 444 IGLPEAFRELADY---------------RMLAFGAGMVVIMLWRPRGLLAHRDPTILLH 487 >gi|322834879|ref|YP_004214906.1| inner-membrane translocator [Rahnella sp. Y9602] gi|321170080|gb|ADW75779.1| inner-membrane translocator [Rahnella sp. Y9602] Length = 429 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 104/341 (30%), Positives = 162/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L++ + + LIY+M GL++VVG GLL L YAIGA Sbjct: 91 LLALVLIIAAIAWPFIVSRGTVDIATLTLIYIMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YG+ W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTYALLNHYYGIGFWEALPLAGLVSAAFGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY---------EIFMYYVLLG 189 +T G GI + G R + + + IF+Y V L Sbjct: 211 NNTELTGGPNGISQIPKPTLFGLEFSRTPRDGGWDTFSNFFNVTYDPSDRIIFLYMVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + II L R + AW +R+++ A SL KL+AF +S+AF G AG F Sbjct: 271 LVIATLFIINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 416 >gi|83593085|ref|YP_426837.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] gi|83575999|gb|ABC22550.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] Length = 452 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 109/349 (31%), Positives = 175/349 (50%), Gaps = 23/349 (6%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + + + + +L +F S +Y + +IY+M WGL+IVVG GLL L Sbjct: 107 FRRNMAFIGLAALVLAIVFPITPFSNRYYVDVATTWMIYIMLGWGLNIVVGLAGLLDLGY 166 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY +L +G S W+ +P++ + + G+++G P L+ RGDYLAI TL Sbjct: 167 VAFYAVGAYSYALLSQTFGWSFWVCLPLAGVFAAFFGVVLGFPVLRLRGDYLAIVTLGFG 226 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIF 182 EI + +L+ W +TNG GI +R F G + +FF S IF Sbjct: 227 EIIRVVLLNWYAVTNGPDGISGIERPSFFGLDFARTAPEGGETFHQFFGISYSPDHRVIF 286 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 ++Y++L + L+ +RR + AW +R+++ A SL KLSAFA+ + F Sbjct: 287 LFYLILALAVLTNIFTGRIRRLPVGRAWEALREDEIACRSLGINPTNVKLSAFALGAMFG 346 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G AG+FFA + ISP+ F F E+ ++++IV+LGGM S + A L+ + E+ + Sbjct: 347 GFAGSFFATRQGFISPESFTFMESAVILAIVVLGGMGSQIGVVIAAFFLVVLPEVFREFD 406 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + A+ V++ R LL R P+ E+ Sbjct: 407 QF---------------RMFFFGAAMVAVMVWRPRGLLSYRDPTILFEK 440 >gi|83717622|ref|YP_440031.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia thailandensis E264] gi|167616730|ref|ZP_02385361.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia thailandensis Bt4] gi|257143218|ref|ZP_05591480.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia thailandensis E264] gi|83651447|gb|ABC35511.1| high-affinity branched-chain amino acid transport system permease protein [Burkholderia thailandensis E264] Length = 423 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 102/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 AIVWALVALGFVWPFIGSRGAIDIATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL+ W +P+SA+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYALLNQYFGLTFWECLPLSALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y + L Sbjct: 217 NLTSITGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGIEYSGKHVVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLMFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|300718818|ref|YP_003743621.1| high-affinity branched-chain amino acid ABC transporter permease [Erwinia billingiae Eb661] gi|299064654|emb|CAX61774.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 424 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 103/341 (30%), Positives = 166/341 (48%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ +++ + + LIYVM GL++VVG GLL L YA+GA Sbjct: 91 LVLLVMIIAAVAWPFIVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAVGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGLS W +P++ +++ G+++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLSFWECLPLAGLVAAMFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPSLFGLEFNRSVRDGGWDTFHNFFGLKYDPSDRIIFLYMVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG+ F Sbjct: 271 LVIITLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL ++ P L+ Sbjct: 386 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLK 416 >gi|167578588|ref|ZP_02371462.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia thailandensis TXDOH] Length = 423 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 102/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 AIVWALVALGFVWPFIGSRGAIDIATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL+ W +P+SA+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYALLNQYFGLTFWECLPLSALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y + L Sbjct: 217 NLTSITGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGIEYSGKHVVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLMFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|253991195|ref|YP_003042551.1| leucine/isoleucine/valine permease [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782645|emb|CAQ85809.1| high-affinity branched-chain amino acid transport system permeas protein livm [Photorhabdus asymbiotica] Length = 428 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 103/341 (30%), Positives = 165/341 (48%), Gaps = 24/341 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + +++ + + + LIYVM GL++VVG GLL L YAIGAY Sbjct: 92 LAVLIIIAAIVWPFVVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGAY 151 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L YGL W +P++ + + G+++G P L+ RGDYLAI TL EI + +L+ Sbjct: 152 TYALLSHYYGLGFWQSLPLAGLTAALSGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLN 211 Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 IT G GI + F G + FF + IF+Y V+L + Sbjct: 212 NTEITGGPNGISQIPKPTFFGLEFNRSVKEGGWDTFHNFFGWKYDPSDRVIFLYLVVLLL 271 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + II L R + AW +R+++ A SL + KL+AF +S+ F G AG FA Sbjct: 272 VIVMIFIINRLLRMPLGRAWEALREDEIACRSLGISPTRIKLAAFTISATFAGFAGTLFA 331 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + +SP+ F F+E+ V++IV+LGGM S + + A +L+ E+ +N Y Sbjct: 332 ARQGFVSPESFTFAESAFVLAIVVLGGMGSQTAVILAAILLVVSREMMRDLNAY------ 385 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L+ + L+++ R LL ++ L++ Sbjct: 386 ---------SMLLLGAMMVLMMVWRPQGLLPMKRRDVRLKQ 417 >gi|238789419|ref|ZP_04633205.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia frederiksenii ATCC 33641] gi|238722562|gb|EEQ14216.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia frederiksenii ATCC 33641] Length = 405 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 68 LLAAAIIIAAIAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 127 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 128 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 187 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 188 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLNYDPSDRIIFLYMVALL 247 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 248 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 307 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 308 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 362 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 363 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 393 >gi|251791613|ref|YP_003006334.1| leucine/isoleucine/valine transporter permease subunit [Dickeya zeae Ech1591] gi|247540234|gb|ACT08855.1| inner-membrane translocator [Dickeya zeae Ech1591] Length = 424 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 102/341 (29%), Positives = 160/341 (46%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L++ + + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LLALALVIVAVVWPFVVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ + + G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTYALLSHYYGLGFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 T G GI + F G + FF IF+Y V L Sbjct: 211 NNTGFTGGPNGISQIPKPTFFGLEFNRAPREGGWDTFHHFFGLNYDPSDRIIFLYMVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVVLAAILLVVSRELMRDLNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ L+ Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRTQIKLQ 416 >gi|254780896|ref|YP_003065309.1| ABC transporter membrane spanning protein (branched chain amino acid) [Candidatus Liberibacter asiaticus str. psy62] gi|254040573|gb|ACT57369.1| ABC transporter membrane spanning protein (branched chain amino acid) [Candidatus Liberibacter asiaticus str. psy62] Length = 351 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 351/351 (100%), Positives = 351/351 (100%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV Sbjct: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD Sbjct: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE Sbjct: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA Sbjct: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG Sbjct: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER Sbjct: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 >gi|257094129|ref|YP_003167770.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046653|gb|ACV35841.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 433 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 167/345 (48%), Gaps = 21/345 (6%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +L + + +Y+ +LIYVM WGL++VVG GLL L V Sbjct: 98 SPLLTWIGWAALGISVALPMLFSENRYVVDTATTVLIYVMLGWGLNVVVGLAGLLDLGYV 157 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 YA+GAY+Y +L +++G W +P++ ++ + G+++G P+L+ RGDYLAI TL E Sbjct: 158 AFYAVGAYTYGLLSTQFGWGFWQALPLAGAVAASFGILLGWPTLRLRGDYLAIVTLGFGE 217 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTV------RSLIRFFRFPSSFVIYEIFMYY 185 I + IL+ W ++ G GI R F G + FF S +F+YY Sbjct: 218 IIRIILVNWTELSGGPNGIASIPRPSFFGLPFKPPGDDPTFASFFGLEFSTNHRIVFLYY 277 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++L + L+ + +R+ I AW IR+++ A ++ KLSAFA+ + G A Sbjct: 278 LILALALLTNLFVSRMRKLPIGRAWEAIREDEIACKAMGINARNVKLSAFAIGAMLGGFA 337 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G FFAA + ISP+ F F+E+ I+++IV+LGGM S +L + Sbjct: 338 GVFFAARQGFISPESFTFNESAIILAIVVLGGMGS---------------QLGVVLASLV 382 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L + F L A+ L+++ + +L R P+ Sbjct: 383 LVLLPELGRDFAEYRMLLFGAAMILIMIWKPGGILSHREPTLRYR 427 >gi|167035271|ref|YP_001670502.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas putida GB-1] gi|166861759|gb|ABZ00167.1| inner-membrane translocator [Pseudomonas putida GB-1] Length = 418 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 166/340 (48%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ L++ + + + ILIYV+ GL+IVVG GLL L V YA+GAY Sbjct: 94 VIIGLIVAALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY +L G S W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 T G GI + F G T ++ FF + + IF+Y V L + Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLEYNSINKVIFLYLVALLLA 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +I L R I AW +R+++ A +L KLSAF + + F G AG+FFAA Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L R Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418 >gi|260466752|ref|ZP_05812938.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259029482|gb|EEW30772.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 531 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 129/343 (37%), Positives = 200/343 (58%), Gaps = 8/343 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + ++AV+ + G S K++D+ GIQILIYVM AWGL+IVVG GLL L V Y Sbjct: 177 ILVIAVLSLNAWSIVGGMQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFY 236 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAY+Y +L + +GLS W+L+P + ++ G+++G P L+ RGDYLAI TL EI + Sbjct: 237 ALGAYAYALLATHFGLSFWILLPAAGAMAALWGVLLGFPVLRLRGDYLAIVTLAFGEIIR 296 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF------RFPSSFVIYEIFMYYVLL 188 +LI W+ +TNG AGI ++ F G ++ S Y+IF+YY++L Sbjct: 297 LVLINWREVTNGSAGISGIPKVSFFGLMSFNVSDPNYIAKVLGIAQSGAYYKIFLYYLIL 356 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 G+C L+A + + LRR + AW +R+++ A SL KL+AFA + F G AG+F Sbjct: 357 GLCLLTAFVTIRLRRLPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAGSF 416 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 FAA + +SP+ F F E+ I+++IV+LGGM SL IA A ++IG E ++ + Sbjct: 417 FAARQGFVSPESFVFLESAIILAIVVLGGMGSLVGIAVAAMVMIGGTEALRELD--FLKQ 474 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + D + + L +A+ +V+L + + R P+ FL+ Sbjct: 475 IFGPDFTPELYRMLLFGMAMVIVMLWKPRGFVGSREPTAFLKE 517 >gi|238798011|ref|ZP_04641500.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia mollaretii ATCC 43969] gi|238718114|gb|EEQ09941.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia mollaretii ATCC 43969] Length = 405 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 105/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY+Y +L YGL Sbjct: 80 WPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 139 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 140 GFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 199 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + L+ +I L Sbjct: 200 SQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYMVALLLVILTLFVINRL 259 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 260 LRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 319 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 320 TFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY---------------SM 364 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 365 LLLGALMVLMMIWRPQGLLPMKRPQLKLK 393 >gi|238750720|ref|ZP_04612219.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia rohdei ATCC 43380] gi|238711110|gb|EEQ03329.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia rohdei ATCC 43380] Length = 405 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 105/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY+Y +L YGL Sbjct: 80 WPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 139 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 140 GFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 199 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + L+ +I L Sbjct: 200 SQIPKPTLFGLEFSRSAKDGGWDTFHNFFGLTYDPGDRIIFLYMVALLLVILTLFVINRL 259 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 260 LRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 319 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 320 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY---------------SM 364 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 365 LLLGALMVLMMIWRPQGLLPMKRPQLKLK 393 >gi|238793537|ref|ZP_04637161.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia intermedia ATCC 29909] gi|238727127|gb|EEQ18657.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia intermedia ATCC 29909] Length = 406 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 69 LLAAAIIIAAIAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 128 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 129 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 188 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 189 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYMVALL 248 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 249 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 308 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 309 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 363 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 364 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 394 >gi|188535380|ref|YP_001909177.1| leucine/isoleucine/valine transporter permease subunit [Erwinia tasmaniensis Et1/99] gi|188030422|emb|CAO98316.1| High-affinity branched-chain amino acid transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 424 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 104/330 (31%), Positives = 163/330 (49%), Gaps = 24/330 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G+++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWQCLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + ++ +I L Sbjct: 223 SQIPKPTFFGLEFNRSVRDGGWDTFHHFFGLQYDPGDRIIFLYLVALLLVVITLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG+ FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L+++ R LL ++ P L++ Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMKRPHLKLKQ 417 >gi|26987875|ref|NP_743300.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas putida KT2440] gi|24982579|gb|AAN66764.1|AE016304_9 high-affinity branched-chain amino acid transport protein [Pseudomonas putida KT2440] Length = 418 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 166/340 (48%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ L++ + + + ILIYV+ GL+IVVG GLL L V YA+GAY Sbjct: 94 VIIGLIVVALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY +L G S W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 T G GI + F G T ++ FF + + IF+Y V L + Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLA 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +I L R I AW +R+++ A +L KLSAF + + F G AG+FFAA Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L R Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418 >gi|259910106|ref|YP_002650462.1| leucine/isoleucine/valine transporter permease subunit [Erwinia pyrifoliae Ep1/96] gi|224965728|emb|CAX57260.1| High-affinity branched-chain amino acid transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283480202|emb|CAY76118.1| branched-chain amino acid ABC transport system,inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 424 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 105/330 (31%), Positives = 163/330 (49%), Gaps = 24/330 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G+++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWQCLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + L+ +I L Sbjct: 223 SQIPKPTFFGLEFNRSVRDGGWDTFHHFFGLEYDPGDRIIFLYLVALLLVVLTLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG+ FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L+++ R LL ++ P L++ Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMKRPHLKLKQ 417 >gi|292489948|ref|YP_003532840.1| branched-chain amino acid ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292900980|ref|YP_003540349.1| high-affinity branched-chain amino acid ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291200828|emb|CBJ47962.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291555387|emb|CBA23790.1| branched-chain amino acid ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312174136|emb|CBX82389.1| branched-chain amino acid ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 424 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 103/330 (31%), Positives = 163/330 (49%), Gaps = 24/330 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY++ ++ YGL Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALMNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G+++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWQCLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + ++ +I L Sbjct: 223 SQIPKPTFFGLEFNRSVRDGGWDTFHHFFGLQYDPGDRIIFLYLVALLLVVMTLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG+ FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L+++ R LL ++ P L++ Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMKRPHLKLQQ 417 >gi|148546416|ref|YP_001266518.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas putida F1] gi|148510474|gb|ABQ77334.1| inner-membrane translocator [Pseudomonas putida F1] Length = 418 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 166/340 (48%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ L++ + + + ILIYV+ GL+IVVG GLL L V YA+GAY Sbjct: 94 VIIGLIVIALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY +L G S W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 T G GI + F G T ++ FF + + IF+Y V L + Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLA 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +I L R I AW +R+++ A +L KLSAF + + F G AG+FFAA Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L R Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418 >gi|238784408|ref|ZP_04628418.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia bercovieri ATCC 43970] gi|238714700|gb|EEQ06702.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia bercovieri ATCC 43970] Length = 405 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 105/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIY+M GL++VVG GLL L YAIGAY+Y +L YGL Sbjct: 80 WPFLVSRGSVDIATLTLIYIMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 139 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 140 GFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 199 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + L+ +I L Sbjct: 200 SQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYMVALLLVILTLFVINRL 259 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 260 LRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 319 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F E+ V++IV+LGGM S + A IL+ EL +N Y Sbjct: 320 TFVESAFVLAIVVLGGMGSQFAVILAAVILVVSRELMRDLNAY---------------SM 364 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 365 LLLGALMVLMMIWRPQGLLPMKRPQLKLK 393 >gi|22124339|ref|NP_667762.1| leucine/isoleucine/valine transporter permease subunit [Yersinia pestis KIM 10] gi|45442995|ref|NP_994534.1| leucine/isoleucine/valine transporter permease subunit [Yersinia pestis biovar Microtus str. 91001] gi|51594583|ref|YP_068774.1| leucine/isoleucine/valine transporter permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108806216|ref|YP_650132.1| leucine/isoleucine/valine transporter permease subunit [Yersinia pestis Antiqua] gi|108810324|ref|YP_646091.1| leucine/isoleucine/valine transporter permease subunit [Yersinia pestis Nepal516] gi|145600673|ref|YP_001164749.1| leucine/isoleucine/valine transporter permease subunit [Yersinia pestis Pestoides F] gi|153997137|ref|ZP_02022270.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis CA88-4125] gi|165926333|ref|ZP_02222165.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939136|ref|ZP_02227687.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011696|ref|ZP_02232594.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213564|ref|ZP_02239599.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401810|ref|ZP_02307298.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421063|ref|ZP_02312816.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426245|ref|ZP_02317998.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026183|ref|YP_001722688.1| leucine/isoleucine/valine transporter permease subunit [Yersinia pseudotuberculosis YPIII] gi|186893585|ref|YP_001870697.1| leucine/isoleucine/valine transporter permease subunit [Yersinia pseudotuberculosis PB1/+] gi|218930808|ref|YP_002348683.1| leucine/isoleucine/valine transporter permease subunit [Yersinia pestis CO92] gi|229837133|ref|ZP_04457298.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229839493|ref|ZP_04459652.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229900056|ref|ZP_04515193.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229900498|ref|ZP_04515627.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270488853|ref|ZP_06205927.1| amino acid or sugar ABC transport system, permease protein [Yersinia pestis KIM D27] gi|294505471|ref|YP_003569533.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis Z176003] gi|21957115|gb|AAM84013.1|AE013643_2 inner membrane permease of high-affinity branched-chain amino acid ABC transport system [Yersinia pestis KIM 10] gi|45437862|gb|AAS63411.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis biovar Microtus str. 91001] gi|51587865|emb|CAH19468.1| ABC type branched-chain aa transport system, permease [Yersinia pseudotuberculosis IP 32953] gi|108773972|gb|ABG16491.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis Nepal516] gi|108778129|gb|ABG12187.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis Antiqua] gi|115349419|emb|CAL22392.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis CO92] gi|145212369|gb|ABP41776.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis Pestoides F] gi|149289443|gb|EDM39521.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis CA88-4125] gi|165912909|gb|EDR31535.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921857|gb|EDR39054.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989465|gb|EDR41766.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205237|gb|EDR49717.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166961192|gb|EDR57213.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048703|gb|EDR60111.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054764|gb|EDR64568.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752717|gb|ACA70235.1| inner-membrane translocator [Yersinia pseudotuberculosis YPIII] gi|186696611|gb|ACC87240.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+] gi|229682517|gb|EEO78604.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229686836|gb|EEO78915.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229695859|gb|EEO85906.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706076|gb|EEO92085.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262363536|gb|ACY60257.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis D106004] gi|262367465|gb|ACY64022.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis D182038] gi|270337357|gb|EFA48134.1| amino acid or sugar ABC transport system, permease protein [Yersinia pestis KIM D27] gi|294355930|gb|ADE66271.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis Z176003] gi|320013597|gb|ADV97168.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 428 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 160/341 (46%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 91 LLAAVVIIAAVAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ + + G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTYALLNHYYGLGFWESLPLAGITAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSHRIIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 416 >gi|300310993|ref|YP_003775085.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300073778|gb|ADJ63177.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 408 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 102/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A V LL+ + + + LIYV+ GL+IVVG GLL L V YA+GA Sbjct: 82 AAVMILLMAALVWPFFGSRGYVDVMTLALIYVVLGLGLNIVVGFAGLLDLGYVGFYAVGA 141 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y + +GL+ W +P++A S G ++G P L+ RGDYLAI TL EI + +L Sbjct: 142 YTYALCNQYFGLTFWECVPLAAAASALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLN 201 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G G+ + G + + + F IF+Y++ L Sbjct: 202 NMTSITGGPDGVSGIPKPTVFGLVMARNPVTEGGTTFHQLFGLSYQGGHMVIFLYFLALL 261 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 M + + L R + AW +R+++ A SL KLSAF + +AF G+AG+FF Sbjct: 262 MVLFTYFVTSRLLRMPMGRAWEALREDEIACRSLGINPTKVKLSAFTLGAAFAGLAGSFF 321 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + EL Y Sbjct: 322 AARQGLVTPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPELARSFAEY----- 376 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 377 ----------RMLIFGLVMVLMMMWRPQGLLPATRPHVELPQ 408 >gi|331004943|ref|ZP_08328355.1| Branched-chain amino acid transport system permease protein livM [gamma proteobacterium IMCC1989] gi|330421241|gb|EGG95495.1| Branched-chain amino acid transport system permease protein livM [gamma proteobacterium IMCC1989] Length = 424 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 104/339 (30%), Positives = 161/339 (47%), Gaps = 24/339 (7%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L+L + + S + + +LIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 98 MVGLILCVIIWPFMSSRGAIDLATLVLIYVMLGLGLNIVVGLAGLLDLGYVAFYAVGAYS 157 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L +GLS W+ +P+ M++ G ++G P L+ RGDYLAI TL EI + +L + Sbjct: 158 YALLSEYFGLSFWVALPIGGMLAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLNNF 217 Query: 141 KPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 +T G GI + G S IF+Y + + + Sbjct: 218 TNLTGGPNGISDIPKPTLFGMEFGRRVKEEGNTLFHEVMGIAYSSSYKVIFLYILAVILV 277 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + +I L R + AW +R+++ A SL KLSAF + +AF G AG FFAA Sbjct: 278 IFTLFVIHRLMRMPVGRAWEALREDEIACRSLGLNRTAIKLSAFTIGAAFAGFAGCFFAA 337 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ISP+ F F E+ I+++IV+LGGM S + A + + EL G + Y Sbjct: 338 RQGFISPESFTFIESAIILAIVVLGGMGSQVGVILAAIAMTVLPELARGFDEY------- 390 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + L+++ R L + P ++ Sbjct: 391 --------RMLMFGLMMVLMMIWRPQGLAPAQRPHMEIK 421 >gi|310765693|gb|ADP10643.1| leucine/isoleucine/valine transporter permease subunit [Erwinia sp. Ejp617] Length = 424 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 103/330 (31%), Positives = 163/330 (49%), Gaps = 24/330 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G+++G P L+ RGDYLAI TL EI + +L+ +T G GI Sbjct: 163 GFWQCLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTELTGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + ++ +I L Sbjct: 223 SQIPKPTFFGLEFNRSVRDGGWDTFHHFFGLQYDPGDRIIFLYLVALLLVVVTLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG+ FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L+++ R LL ++ P L++ Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMKRPHLKLKQ 417 >gi|120556244|ref|YP_960595.1| leucine/isoleucine/valine transporter permease subunit [Marinobacter aquaeolei VT8] gi|120326093|gb|ABM20408.1| L-isoleucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-leucine ABC transporter membrane protein [Marinobacter aquaeolei VT8] Length = 423 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 103/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ +++ + + +LIYVM A GL++VVG GLL L V YA+GAY Sbjct: 96 VLTGIVVLALFWPFFVSRGAVDLATLVLIYVMLALGLNVVVGLAGLLDLGYVAFYAVGAY 155 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 ++ +L G+S W+ +P+ A ++ G+++G P L+ RGDYLAI TL EI + +L Sbjct: 156 TFALLSQYAGISFWMALPIGACLAALFGLVLGFPVLRLRGDYLAIVTLGFGEIIRILLNN 215 Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 W +T G GI G S F S IF+Y + L + Sbjct: 216 WTAVTGGPNGIGGIPDPTLFGMEFGRRVREEGNTSFHETFGIAYSGEHKVIFLYLIALVL 275 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 ++A II R + AW +R+++ A SL + KLSAF + + F G AG FA Sbjct: 276 AVITALIIRRFMRMPVGRAWEALREDEIAARSLGLSRTAVKLSAFTIGAFFAGFAGTVFA 335 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + ISP+ F F E+ I+++IV+LGGM S + A + + EL + Y Sbjct: 336 SKQGFISPESFVFLESAIILAIVVLGGMGSQLGVVLAAVAVTILPELAREFSDY------ 389 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + A+ L+++ R L+ +R L R Sbjct: 390 ---------RMLVFGAAMVLMMVWRPQGLMPMRRIHIELRR 421 >gi|27380783|ref|NP_772312.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27353948|dbj|BAC50937.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 441 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 112/338 (33%), Positives = 178/338 (52%), Gaps = 19/338 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA + L +Q+YI + I +L YVM WGL++VVG GLL L V YA+G Sbjct: 105 LAPALLIFTLLVPVIFYNQRYILDLAILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAVG 164 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYSY +L + +G S W+ +P++ +++ G+++G P L+ RGDYLAI TL EI + ++ Sbjct: 165 AYSYGLLATNFGWSFWICLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLVI 224 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRF----FRFPSSFVIYEIFMYYVLLGMCFL 193 I W+ +T G G+ R F G + + S +F++Y++L + L Sbjct: 225 INWQSLTGGPNGVSGIPRPTFFGIPLDNSDDGLAAKLGIEYSATHRIVFLFYLILALALL 284 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + + LRR I AW +R+++ A +L KL+AFA + F G AGAFFA + Sbjct: 285 TNWVTIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFATGAMFGGFAGAFFATRQ 344 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ISP+ F F E+ +V++IV+LGGM S +A A +IG EL + Y Sbjct: 345 GFISPESFTFQESALVLAIVVLGGMGSQLGVALAALAMIGGFELFRSLETY--------- 395 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +A+ L+++ R L+ R P+ +L + Sbjct: 396 ------RMLVFGMAMVLIMIWRPRGLVGHRAPTVYLTK 427 >gi|153947847|ref|YP_001399243.1| leucine/isoleucine/valine transporter permease subunit [Yersinia pseudotuberculosis IP 31758] gi|152959342|gb|ABS46803.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] Length = 428 Score = 143 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 160/341 (46%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 91 LLAAVVIIAAVAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ + + G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTYALLNHYYGLGFWESLPLAGITAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRTVKDGGWDTFHNFFGLTYDPSHRIIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 416 >gi|313497499|gb|ADR58865.1| LivM [Pseudomonas putida BIRD-1] Length = 418 Score = 143 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 166/340 (48%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ L++ + + + ILIYV+ GL+IVVG GLL L V YA+GAY Sbjct: 94 VIIGLIVMALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY +L G S W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 T G GI + F G T ++ FF + + IF+Y V L + Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLA 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +I L R I AW +R+++ A +L KLSAF + + F G AG+FFAA Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L R Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418 >gi|238763653|ref|ZP_04624613.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia kristensenii ATCC 33638] gi|238698131|gb|EEP90888.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia kristensenii ATCC 33638] Length = 405 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 68 LLAAAIIIAAIAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 127 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 128 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 187 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 188 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYLVALL 247 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 248 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 307 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 308 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 362 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 363 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 393 >gi|194290216|ref|YP_002006123.1| leucine/isoleucine/valine transporter permease subunit [Cupriavidus taiwanensis LMG 19424] gi|193224051|emb|CAQ70060.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Cupriavidus taiwanensis LMG 19424] Length = 427 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 99/342 (28%), Positives = 159/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 101 VAVWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGYAGLLDLGYVGFYAVGG 160 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL+ W +P++A +S G ++G P L+ RGDYLAI TL EI + +L Sbjct: 161 YTYALLNQYFGLTFWECLPIAAAMSAGFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLN 220 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G G+ + G + R+ + IF+Y + L Sbjct: 221 NLTSLTGGPDGVSGIPKPSVFGIEMARSASVEGTRTFHELIGLDYASQHMVIFLYLIALL 280 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +R+++ A SL KLSAF + ++F G+ GAFF Sbjct: 281 LVGFTLFVTSRLIRMPMGRAWEALREDEIACRSLGLNPTRIKLSAFTLGASFAGLGGAFF 340 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ +V+++V+LGGM S + A +L + E+ G Y Sbjct: 341 AARQGLVNPESFTFIESALVLAVVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 395 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L R Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPR 427 >gi|297194986|ref|ZP_06912384.1| inner-membrane translocator [Streptomyces pristinaespiralis ATCC 25486] gi|197721908|gb|EDY65816.1| inner-membrane translocator [Streptomyces pristinaespiralis ATCC 25486] Length = 461 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 82/347 (23%), Positives = 147/347 (42%), Gaps = 28/347 (8%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + DK + L + L+L L + + + + + QI I+ + A GL++V+G GLL L Sbjct: 117 RTDKRVKLGGIAVLLILVLVIPSGLERSWQTVLVDQIAIFALLAIGLNVVIGWAGLLDLG 176 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL------PSLKFRGDYLA 123 +A+GAYS R + +++ +I A + P+L+ RGDYLA Sbjct: 177 FFAFFAVGAYSTAYWTGRLPIEPPVVLNNFWVIPVAVITCLICGLLLGAPTLRLRGDYLA 236 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 I TL EI + +T G G + I F + I + Sbjct: 237 IVTLGFHEIIYLVAKNADGLTGGPQGARLIPDFS---------IDFAGLEYKWSIKPLPY 287 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 +Y+L+ L + L + + AW IR+++ A + + KL AFA+ ++ G Sbjct: 288 WYLLVFFIVLVIILFSRLEHSRVGRAWTAIREDEIAAAANGVNTVQFKLMAFAIGASTSG 347 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 +AG F + I+P++F ++I++++ VI GGM S+ + TAIL+ + E Sbjct: 348 VAGVIFTSKYGYINPEVFPLLQSILILAYVIFGGMGSIPGVLIGTAILVWLPEALKDWVD 407 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + L ++++ R + R L+ Sbjct: 408 -------------PSDRYMYLGALLVIMMIYRPQGVWPSRRRQRELK 441 >gi|170720342|ref|YP_001748030.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas putida W619] gi|169758345|gb|ACA71661.1| inner-membrane translocator [Pseudomonas putida W619] Length = 418 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 105/340 (30%), Positives = 166/340 (48%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + + ILIYV+ GL+IVVG GLL L V YA+GAY Sbjct: 94 IIIGLIVVALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY +L G S W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 T G GI + G T ++ +F P + + IF+Y V L + Sbjct: 214 LTDWTGGPNGISNIPKPELFGLTFERRAAEGMQTFHEYFGLPYNSINKVIFLYLVALLLA 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +I L R I AW +R+++ A +L KLSAF + + F G AG+FFAA Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L R Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418 >gi|300721695|ref|YP_003710971.1| high-affinity branched-chain amino acid ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297628188|emb|CBJ88743.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 430 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 166/341 (48%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ L+ + + + + + LIY+M GL+IVVG GLL L YAIGA Sbjct: 97 IILILLVALAVIWSFIASRGSIDIATLTLIYIMLGLGLNIVVGLSGLLVLGYAGFYAIGA 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ + + G+++G P L+ RGDYLAI TL EI + +L+ Sbjct: 157 YTYALLNHYYGLGFWQSLPLAGLTAALSGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + FF IF+Y V L Sbjct: 217 NNTELTGGPNGISQIPKPTLFGLEFNRSVKEGGWDTFHNFFGLKYDPSDRIIFLYLVALL 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS II L + + AW +R+++ A SL + KL+AF +S+AF G+AG F Sbjct: 277 LVLLSLFIIHRLLKMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGIAGTLF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ISP+ F F+E+ V++IV+LGGM S + + + IL+ E+ +N Y Sbjct: 337 AARQGFISPESFTFAESAFVLAIVVLGGMGSQTAVILSAIILVVSREMIRDLNEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ L+ Sbjct: 392 ----------SMLLLGALMVLMMIWRPQGLLPMKRSQVELQ 422 >gi|37527943|ref|NP_931288.1| leucine/isoleucine/valine transporter permease subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787379|emb|CAE16468.1| High-affinity branched-chain amino acid transport system permease protein LivM [Photorhabdus luminescens subsp. laumondii TTO1] Length = 425 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 107/330 (32%), Positives = 160/330 (48%), Gaps = 24/330 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY+Y +L YGL Sbjct: 103 WPFIVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGAYTYALLSHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ + + G+++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWQSLPLAGLTAALSGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V+L + L+ II L Sbjct: 223 SQIPKPTFFGLEFNRSVKEGGWDTFHNFFGLKYDPSDRVIFLYLVVLLLVILTVLIINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPTRIKLAAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + + A +L+ E+ +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQTAVILAAILLVVSREMMRDLNAY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L+ + L+++ R LL + LER Sbjct: 388 LLLGAMMVLMMIWRPQGLLPTKRRHVKLER 417 >gi|315655907|ref|ZP_07908805.1| ABC superfamily ATP binding cassette transporter [Mobiluncus curtisii ATCC 51333] gi|315489971|gb|EFU79598.1| ABC superfamily ATP binding cassette transporter [Mobiluncus curtisii ATCC 51333] Length = 616 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 71/336 (21%), Positives = 136/336 (40%), Gaps = 43/336 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ V L + + Y+ + + I + ++ A L++V G G SL A Sbjct: 12 AVILAVLWGLGYALITVGVIDSYVFNTMVTICVNIILAVSLNLVTGFTGQFSLGHAGFMA 71 Query: 76 IGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +GAYS ++ + + + V + + + G ++GLP+L+ +GDYLAIATL M+EI Sbjct: 72 VGAYSTGLIVTAIPTYGGFFWGLFVGGIFAASIGFLIGLPTLRLKGDYLAIATLGMAEII 131 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + +L+ + F+ + + +L + Sbjct: 132 RVLLLNLEFSGGAA--------------------------GLFIQLQFTDWNILFILTAG 165 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + +I + ++ +R+++ A S+ K AF V S F + G + + Sbjct: 166 TIVLIRNFLDSRHGHSCIAVREDEIAAESIGVYSTRIKTLAFVVGSFFGAVGGGLYIGNF 225 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + PD+F F +I ++ IV+LGG+ SL+ A +L V L Sbjct: 226 FFVKPDLFNFMMSINILVIVVLGGLGSLTGSIIAAILLAVVSTLLQ-------------- 271 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 F L + L ++++ R LL + S + Sbjct: 272 -PFPEIRMILYALVLVILMVFRPQGLLGTKELSFKV 306 >gi|113868585|ref|YP_727074.1| leucine/isoleucine/valine transporter permease subunit [Ralstonia eutropha H16] gi|113527361|emb|CAJ93706.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 427 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A V+ LL + + + LIYV+ GL+IVVG GLL L V YAIG Sbjct: 101 AAVWMLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGYAGLLDLGYVGFYAIGG 160 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL W +P++A +S G ++G P L+ RGDYLAI TL EI + + Sbjct: 161 YTYALLNQYFGLGFWECLPIAAAMSATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G G+ + G + + + S IF+Y + L Sbjct: 221 NLTSLTGGPDGVSGIPKPTVFGIEMARSASVEGAKTFHDLLGWDYSGQHMVIFLYLLALL 280 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 281 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ +++++V+LGGM S + A +L + E+ G Y Sbjct: 341 AARQGLVNPESFTFIESALILAVVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 395 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427 >gi|325275262|ref|ZP_08141219.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas sp. TJI-51] gi|324099603|gb|EGB97492.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas sp. TJI-51] Length = 418 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 108/340 (31%), Positives = 167/340 (49%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ L++ + + + ILIYV+ GL+IVVG GLL L V YA+GAY Sbjct: 94 VIMGLIVAALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY +L G S W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 T G GI + F G T ++ FF P + + IF+Y V L + Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLPYNSINKVIFLYLVALLLA 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +I L R I AW +R+++ A +L KLSAF + + F G AG+FFAA Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L R Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418 >gi|148256625|ref|YP_001241210.1| high-affinity branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146408798|gb|ABQ37304.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 446 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 119/338 (35%), Positives = 182/338 (53%), Gaps = 19/338 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA + L +Q+YI +GI +L YVM WGL++VVG GLL L V YA+G Sbjct: 110 LAPALLIFTLLVPVIFYNQRYILDLGILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAVG 169 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYSY +L + +GLS W+ +P++ +++ G+++G P L+ RGDYLAI TL EI + +L Sbjct: 170 AYSYGLLSTTFGLSFWICLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLVL 229 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIR----FFRFPSSFVIYEIFMYYVLLGMCFL 193 I W+ +T G GI R G + P S +F++Y++L + L Sbjct: 230 INWQDVTGGPNGISGIPRPSLFGIPLTPGPDGLAAMLGIPFSPTHRIVFLFYLILALALL 289 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + + LRR I AW +R+++ A +L I KL+AFA + F G AGAFFA + Sbjct: 290 TNWVTIRLRRLPIGRAWEALREDEVACRALGINITTTKLTAFATGAMFGGFAGAFFATRQ 349 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ISP+ F F E+ +V++IV+LGGM S +A A +IG EL + Y Sbjct: 350 GFISPESFTFQESALVLAIVVLGGMGSQLGVALAALAMIGGFELFRSLEVY--------- 400 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +A+ LV++ R ++ R+P+ FLE+ Sbjct: 401 ------RMLVFGLAMVLVMIWRPRGIVGHRSPTVFLEK 432 >gi|330949947|gb|EGH50207.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae Cit 7] Length = 421 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 168/338 (49%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 IT G GI ++ G T ++ FF P + + IF+Y + L + Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|315656167|ref|ZP_07909058.1| ABC superfamily ATP binding cassette transporter [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493169|gb|EFU82769.1| ABC superfamily ATP binding cassette transporter [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 616 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 134/331 (40%), Gaps = 43/331 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ V L + + YI + + I + ++ A L++V G G SL A Sbjct: 12 AIILAVLWGLGYALITVGVIDSYIFNTMVTICVNIILAVSLNLVTGFTGQFSLGHAGFMA 71 Query: 76 IGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +GAYS ++ + + + V + + + G ++GLP+L+ +GDYLAIATL M+EI Sbjct: 72 VGAYSTGLIVTAIPTYGGFFWGLFVGGIFAASIGFLIGLPTLRLKGDYLAIATLGMAEII 131 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + +L+ + F+ + + +L + Sbjct: 132 RVLLLNLEFSGGAA--------------------------GLFIQLQFTDWNILFILTAG 165 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + +I + ++ IR+++ A S+ K AF V S F + G + + Sbjct: 166 TIVLIRNFLDSRHGHSCIAIREDEIAAESIGVYSTRIKTLAFVVGSFFGAVGGGLYIGNF 225 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + PD+F F +I ++ IV+LGG+ SL+ A +L V L Sbjct: 226 FFVKPDLFNFMMSINILVIVVLGGLGSLTGSIIAAILLAVVSTLLQ-------------- 271 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 F L + L ++++ R LL + Sbjct: 272 -PFPEIRMILYALVLVILMVFRPQGLLGTKE 301 >gi|271502542|ref|YP_003335568.1| inner-membrane translocator [Dickeya dadantii Ech586] gi|270346097|gb|ACZ78862.1| inner-membrane translocator [Dickeya dadantii Ech586] Length = 426 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 100/328 (30%), Positives = 155/328 (47%), Gaps = 23/328 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY+Y +L YGL Sbjct: 103 WPFVVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLSHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ + + G ++G P L+ RGDYLAI TL EI + +L+ T G GI Sbjct: 163 GFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTGFTGGPNGI 222 Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + F G + FF IF+Y V L + L+ +I L Sbjct: 223 SQIPKPTFFGLEFNRTAQGSWDTFHHFFGLRYDPSDRIIFLYMVALLLVVLTLFVINRLL 282 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 RMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESFT 342 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 FVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SML 387 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL ++ L+ Sbjct: 388 VLGALMVLMMIWRPQGLLPMKRTQIKLQ 415 >gi|298345501|ref|YP_003718188.1| branched subunit amino acid ABC transporter [Mobiluncus curtisii ATCC 43063] gi|298235562|gb|ADI66694.1| branched chain amino acid ABC superfamily ATP binding cassette transporter [Mobiluncus curtisii ATCC 43063] Length = 616 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 134/331 (40%), Gaps = 43/331 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ V L + + YI + + I + ++ A L++V G G SL A Sbjct: 12 AIILAVLWGLGYALITVGVIDSYIFNTMVTICVNIILAVSLNLVTGFTGQFSLGHAGFMA 71 Query: 76 IGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +GAYS ++ + + + V + + + G ++GLP+L+ +GDYLAIATL M+EI Sbjct: 72 VGAYSTGLIVTAIPTYGGFFWGLFVGGIFAASIGFLIGLPTLRLKGDYLAIATLGMAEII 131 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + +L+ + F+ + + +L + Sbjct: 132 RVLLLNLEFSGGAA--------------------------GLFIQLQFTDWNILFILTAG 165 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + +I + ++ IR+++ A S+ K AF V S F + G + + Sbjct: 166 TIVLIRNFLDSRHGHSCIAIREDEIAAESIGVYSTRIKTLAFVVGSFFGAVGGGLYIGNF 225 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + PD+F F +I ++ IV+LGG+ SL+ A +L V L Sbjct: 226 FFVKPDLFNFMMSINILVIVVLGGLGSLTGSIIAAILLAVVSTLLQ-------------- 271 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 F L + L ++++ R LL + Sbjct: 272 -PFPEIRMILYALVLVILMVFRPQGLLGTKE 301 >gi|167722718|ref|ZP_02405954.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei DM98] Length = 423 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 102/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 VIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P+SA+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYALLNQHFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y + L Sbjct: 217 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 423 >gi|28871252|ref|NP_793871.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28854502|gb|AAO57566.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331015725|gb|EGH95781.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 421 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ M++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGMMAAVFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +T G GI D+ F G T ++ +F P + + +F+Y + L + Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEYFGLPYNSINKVVFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|213971397|ref|ZP_03399511.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301383583|ref|ZP_07232001.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. tomato Max13] gi|302059990|ref|ZP_07251531.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. tomato K40] gi|302132071|ref|ZP_07258061.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923840|gb|EEB57421.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 421 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ M++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWVCLPIAGMMAAVFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +T G GI D+ F G T ++ +F P + + +F+Y + L + Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEYFGLPYNSINKVVFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|271964460|ref|YP_003338656.1| branched-chain amino acid ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270507635|gb|ACZ85913.1| ABC-type branched-chain amino acid transport system permease component-like protein [Streptosporangium roseum DSM 43021] Length = 389 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 82/349 (23%), Positives = 148/349 (42%), Gaps = 23/349 (6%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQK--YIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + L V LL +G S + + I YV+ A GL++VVG GLL Sbjct: 32 QRWILYVALIVGALLLPSESIGGFMSPYTDWASILFFPIGTYVILAIGLNVVVGQAGLLD 91 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L V YA+G Y+ ++G+R G + WL++ V I G+ +G P+L+ RGDYLAI TL Sbjct: 92 LGFVAFYAVGGYAMALIGTRLGWNFWLILVVGIGICALSGITLGGPTLRLRGDYLAIVTL 151 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS-----FVIYEIF 182 EI + I G GI + + + V+ Sbjct: 152 GFGEIIRITARNTDAI-GGPNGIRGIPHPPSIDELTIFGVDVYELLGVKIFKYGVLDPRP 210 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY+L+ + ++ ++ ++ + AW IR+++ A + K+ AFA+ ++ Sbjct: 211 YYYLLVALAVVAIILVKRWEKSRVGRAWAAIREDEDAAEVMGVPTFRFKMLAFAIGASIG 270 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G G +A+ ++P+ F+F + +++ V++GG +L + ++ + E G+ Sbjct: 271 GAMGVLWASKVISLNPNDFQFLLSATILAAVVMGGAGNLPGVMLGAFVVAWLPERFRGLQ 330 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 Y + L +++ R LL R L+ Sbjct: 331 EY---------------RMLIFGAVLVALMIFRPEGLLPSRQRKAELKE 364 >gi|123440624|ref|YP_001004618.1| leucine/isoleucine/valine transporter permease subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087585|emb|CAL10366.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 428 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 91 LLAAAIIIAAIAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYMVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 416 >gi|76818367|ref|YP_337291.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei 1710b] gi|161723220|ref|YP_110598.2| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei K96243] gi|167827253|ref|ZP_02458724.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei 9] gi|167897337|ref|ZP_02484739.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei 7894] gi|167905696|ref|ZP_02492901.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei NCTC 13177] gi|167914002|ref|ZP_02501093.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei 112] gi|167921914|ref|ZP_02509005.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei BCC215] gi|76582840|gb|ABA52314.1| high-affinity branched-chain amino acid transport system permease protein [Burkholderia pseudomallei 1710b] Length = 423 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P+SA+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y + L Sbjct: 217 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 423 >gi|226944074|ref|YP_002799147.1| leucine/isoleucine/valine transporter permease subunit [Azotobacter vinelandii DJ] gi|226719001|gb|ACO78172.1| high affinity branched chain amino acid ABC transporter, permease component [Azotobacter vinelandii DJ] Length = 418 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 106/328 (32%), Positives = 161/328 (49%), Gaps = 23/328 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + + ILIY M GL+IVVG GLL L V YA+GAY+Y +L +GL Sbjct: 105 WPFLASRGAVDLATLILIYAMLGLGLNIVVGLAGLLDLGYVGFYAVGAYTYALLSQHFGL 164 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ ++ G ++G P L+ RGDYLAI TL EI + +L +T G GI Sbjct: 165 GFWTCLPIAGAMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNLTELTGGPNGI 224 Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 DR F G T ++ FF P IF+Y + L + L+ +I L Sbjct: 225 GGIDRPTFFGLTFERRAPEGLQTFHGFFGLPYDSADKVIFLYLIALSLVLLTLFVINRLL 284 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R I AW +R+++ A +L KLSAF + + F G AG+FFAA + ++P+ F Sbjct: 285 RMPIGRAWEALREDEIACRALGLNPTAIKLSAFTLGACFAGFAGSFFAARQGLVTPESFT 344 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ ++++IV+LGGM S + A ++I + EL + Y Sbjct: 345 FIESAVILAIVVLGGMGSQLGVILAAMVMILLPELMREFSEY---------------RML 389 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350 L L L+++ R LL ++ P L+ Sbjct: 390 LFGALLVLMMVWRPQGLLPMQRPHLELK 417 >gi|332704340|ref|ZP_08424428.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554489|gb|EGJ51533.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 415 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 94/334 (28%), Positives = 159/334 (47%), Gaps = 26/334 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A + L + Y ++ ++YV+ GL+IVVG GLL L V YA+G Sbjct: 90 VAALAILATVAVVFPLVFSTYQTNIMTSTMLYVVLGLGLNIVVGLAGLLDLGYVAFYAVG 149 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+Y +L +GL W ++PV A++ G+++G P L+ RGDYLAI TL I + +L Sbjct: 150 AYAYALLNYHFGLGFWTVLPVGALLGALFGLMLGFPVLRLRGDYLAIVTLGFGSIIRLVL 209 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 W + G +GI R F + ++YY++LG+ ++ + Sbjct: 210 ENWNEFSKGPSGISNIARPGFF-----------GMNFTVSESVTYLYYIMLGLVLVTILV 258 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L+ + I AW +R+++ A ++ + KL AFA+ + + G+AG FAA I+ Sbjct: 259 VNRLKESRIGRAWMALREDEIACQAMGIDKMKTKLLAFALGATWAGIAGVVFAAKTTFIN 318 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F F E+ ++SIV+LGGM S+ + ILI + E + Y Sbjct: 319 PASFTFLESAFILSIVVLGGMGSILGVILGAFILILLPEYMRAFSEY------------- 365 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + LV++ R L++ + ++ Sbjct: 366 --RMLLFGAIMVLVMVFRPQGLVKFQRRHYEVKE 397 >gi|126444849|ref|YP_001061863.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei 668] gi|226194898|ref|ZP_03790489.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237509067|ref|ZP_04521782.1| high-affinity branched-chain amino acid transport system permease protein LivM [Burkholderia pseudomallei MSHR346] gi|254182336|ref|ZP_04888931.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254187397|ref|ZP_04893910.1| high-affinity branched-chain amino acid transport protein [Burkholderia pseudomallei Pasteur 52237] gi|254198714|ref|ZP_04905134.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254262943|ref|ZP_04953808.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|126224340|gb|ABN87845.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|157935078|gb|EDO90748.1| high-affinity branched-chain amino acid transport protein [Burkholderia pseudomallei Pasteur 52237] gi|169655453|gb|EDS88146.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184212872|gb|EDU09915.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|225932703|gb|EEH28699.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|235001272|gb|EEP50696.1| high-affinity branched-chain amino acid transport system permease protein LivM [Burkholderia pseudomallei MSHR346] gi|254213945|gb|EET03330.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 427 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 101 AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P+SA+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 161 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y + L Sbjct: 221 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 280 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 281 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 341 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 395 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427 >gi|134284144|ref|ZP_01770837.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|134244462|gb|EBA44567.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 305] Length = 427 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 101 AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P+SA+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 161 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y + L Sbjct: 221 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 280 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 281 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 341 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 395 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427 >gi|304391057|ref|ZP_07373009.1| ABC superfamily ATP binding cassette transporter [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325940|gb|EFL93186.1| ABC superfamily ATP binding cassette transporter [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 616 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 134/331 (40%), Gaps = 43/331 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ V L + + YI + + I + ++ A L++V G G SL A Sbjct: 12 AIILAVLWGLGYALITVGVIDSYIFNTMVTICVNIILAVSLNLVTGFTGQFSLGHAGFMA 71 Query: 76 IGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +GAYS ++ + + + V + + + G ++GLP+L+ +GDYLAIATL M+EI Sbjct: 72 VGAYSTGLIVTAIPTYGGFFWGLFVGGIFAASIGFLIGLPTLRLKGDYLAIATLGMAEII 131 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + +L+ + F+ + + +L + Sbjct: 132 RVLLLNLEFSGGAA--------------------------GLFIQLQFTDWNILFILTAG 165 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + +I + ++ IR+++ A S+ K AF V S F + G + + Sbjct: 166 TIVLIRNFLDSRHGHSCIAIREDEIAAESIGVYSTRIKTLAFVVGSFFGAVGGGLYIGNF 225 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + PD+F F +I ++ IV+LGG+ SL+ A +L V L Sbjct: 226 FFVKPDLFNFMMSINILVIVVLGGLGSLTGSIIAAILLAVVSTLLQ-------------- 271 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 F L + L ++++ R LL + Sbjct: 272 -PFPEIRMILYALVLVILMVFRPQGLLGTKE 301 >gi|317126276|ref|YP_004100388.1| inner-membrane translocator [Intrasporangium calvum DSM 43043] gi|315590364|gb|ADU49661.1| inner-membrane translocator [Intrasporangium calvum DSM 43043] Length = 370 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 86/332 (25%), Positives = 140/332 (42%), Gaps = 32/332 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I L + + L + S Y + LI+VM A GL++VVG GLL L Sbjct: 49 RAISHPLFAWAVVAMALAMPFINSSAYAIRISTDALIFVMLAVGLNVVVGYCGLLDLGYA 108 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +AIGAY+ IL + + I L +P + + G+++G P+L+ R DYLAI TL E Sbjct: 109 AFFAIGAYTSGILATAFDWHIALTLPFVIVAAVIGGLLIGGPTLRLRSDYLAIVTLGFGE 168 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + T G GI+ F S + +I Y+V + Sbjct: 169 IIRITANNL-DFTGGPNGIFGIP----------------DFGSFGLRTDIATYWVTAAVV 211 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ + R + AWR +R+++ A ++ K +A+ + F G+AG FAA Sbjct: 212 SLAVLASARIGRGRLGRAWRFVREDEDAAEAMGIHTYKIKFAAYITGAIFGGLAGVLFAA 271 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ISP F F + +++ V+LGGM S + ++ + EL G Sbjct: 272 HQTAISPMSFNFLWSALILMAVVLGGMGSTPGVVVGALVIALLPELLRG----------- 320 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L +V++ R + R Sbjct: 321 ----AENWRYLVFGVLLIVVMIFRPQGIWPHR 348 >gi|149375743|ref|ZP_01893511.1| leucine/isoleucine/valine transporter permease subunit [Marinobacter algicola DG893] gi|149359868|gb|EDM48324.1| leucine/isoleucine/valine transporter permease subunit [Marinobacter algicola DG893] Length = 423 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 24/341 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ +++ + + + + +LIY+M A GL++VVG GLL L V YA+GAY Sbjct: 96 LLTLMIIGALVWPFIASRGAVDLSTLVLIYIMLALGLNVVVGLAGLLDLGYVAFYAVGAY 155 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 ++ +L YG+S W +P+ A+++ G+++G P L+ RGDYLAI TL EI + +L Sbjct: 156 TFALLSQYYGVSFWFALPIGALLAALFGLVLGFPVLRLRGDYLAIVTLGFGEIIRILLNN 215 Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 +T G GI G S F S IF+Y + L + Sbjct: 216 MTNLTGGPNGIGGIPDPTLFGMEFGRRVKEEGNTSFHETFGIAYSGEHKVIFLYLIALVL 275 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 ++A I L R + AW +R+++ A SL KLSAF + + F G AG FA Sbjct: 276 AVITAIAIRRLMRMPVGRAWEALREDEIAAKSLGLNRTAVKLSAFTIGAFFAGFAGTVFA 335 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + ISP+ F F E+ I+++IV+LGGM S + A + + EL + Y Sbjct: 336 SKQGFISPESFVFLESAIILAIVVLGGMGSQMGVILAAIAVTILPELAREFSEY------ 389 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + A+ L+++ R LL +R L++ Sbjct: 390 ---------RMLIFGAAMVLMMVWRPQGLLPMRRIHIELKK 421 >gi|307128898|ref|YP_003880914.1| leucine/isoleucine/valine ABC transporter membrane protein [Dickeya dadantii 3937] gi|306526427|gb|ADM96357.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 424 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 24/331 (7%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 + + +IY++ GL++VVG GLL L YAIGAY+Y +L Y Sbjct: 101 VAWPFVVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLSHYY 160 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 GL W +P++ + + G ++G P L+ RGDYLAI TL EI + +L+ T G Sbjct: 161 GLGFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTGFTGGPN 220 Query: 149 GIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 GI + F G + FF IF+Y V L + L+ +I Sbjct: 221 GISQIPKPTFFGLEFSRSPREGGWDTFHHFFGLTYDPSDRIIFLYMVALLLVLLTLFVIN 280 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ Sbjct: 281 RLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPE 340 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 341 SFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY--------------- 385 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ L+ Sbjct: 386 SMLLLGALMVLMMIWRPQGLLPMKRTQIKLQ 416 >gi|332159857|ref|YP_004296434.1| leucine/isoleucine/valine transporter permease subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607598|emb|CBY29096.1| branched-chain amino acid transport system permease protein LivM [Yersinia enterocolitica subsp. palearctica Y11] gi|325664087|gb|ADZ40731.1| leucine/isoleucine/valine transporter permease subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862612|emb|CBX72765.1| high-affinity branched-chain amino acid transport system permease protein livM [Yersinia enterocolitica W22703] Length = 428 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 91 LLAAAIIIAAIAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYMVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 416 >gi|50123259|ref|YP_052426.1| leucine/isoleucine/valine transporter permease subunit [Pectobacterium atrosepticum SCRI1043] gi|49613785|emb|CAG77236.1| high-affinity branched-chain amino acid transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 424 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY+Y +L YGL Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ M + G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWESLPLAGMAAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + L+ +I L Sbjct: 223 SQIPKPTFFGLEFGRNARDGGWDTFHNFFGLQYDPSDRIIFLYLVALLLVILTLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +RD++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALRDDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 388 LLLGALMVLMMIWRPQGLLPMKRPEMKLK 416 >gi|254299839|ref|ZP_04967287.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157809700|gb|EDO86870.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 406e] Length = 427 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 159/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 101 AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P+SA+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 161 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y L Sbjct: 221 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLTALV 280 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 281 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 341 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 395 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427 >gi|300787992|ref|YP_003768283.1| branched-chain amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299797506|gb|ADJ47881.1| permease component of ABC-type branched-chain amino acid transport system [Amycolatopsis mediterranei U32] Length = 385 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 89/345 (25%), Positives = 146/345 (42%), Gaps = 17/345 (4%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ-ILIYVMFAWGLSIVVGSLGLL 66 +Y + L+ L S+ I I Y++ A GL+IVVG G+L Sbjct: 32 WQRYLLYIALIVFALILPAPWIGSFMSPASDWTSVLIFPIGTYILLAIGLNIVVGLAGML 91 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L V +AIGAY+ I G+++G ++W I V +++ G+I+G P+L+ RGDYLAI T Sbjct: 92 DLGFVAFFAIGAYTVAIFGTKFGWNVWPTILVGIVLAAVSGVILGAPTLRLRGDYLAIVT 151 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + G GI F F++ YY+ Sbjct: 152 LGFGEIVRITANN-TNSIGGARGITNIPHPS------------PIFGMEFLLDPAPYYYL 198 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L L + L+++ + AW IR+++ A + KL AFA+ + G AG Sbjct: 199 ILVAIVLVIVFSVRLQKSRVGRAWAAIREDEDAAELMGVPTFKFKLLAFAIGAMIGGFAG 258 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A+ I+PD F F + +++ V+LGG +L + ++ + E + + Sbjct: 259 GIYASKAVFIAPDNFPFILSATILAAVVLGGAGNLPGVILGAFLVAWIPERLRSVE---W 315 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L D L L L++ +R +L R L Sbjct: 316 LRHLLGDKDPAEYRILLFGAVLVLMMALRPEGILPSRQRKAELRE 360 >gi|66047074|ref|YP_236915.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. syringae B728a] gi|63257781|gb|AAY38877.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] Length = 421 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 169/338 (50%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 IT G GI ++ F G T ++ FF P + + IF+Y + L + Sbjct: 214 TDITGGPNGISNIEKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|104780489|ref|YP_606987.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas entomophila L48] gi|95109476|emb|CAK14177.1| high-affinity branched-chain amino acid transport protein [Pseudomonas entomophila L48] Length = 418 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 106/340 (31%), Positives = 166/340 (48%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ L++ + + + ILIYV+ GL+IVVG GLL L V YA+GAY Sbjct: 94 VIIGLIVAALIWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY +L G S W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 T G GI + F G T ++ FF + + IF+Y V L + Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLEYNSINKVIFLYLVALLLA 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +I L R I AW +R+++ A +L KLSAF + + F G AG+FFAA Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ I+++IV+LGGM S + A ++I + E+ + Y Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREFSEY------- 386 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L R Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELPR 418 >gi|330878872|gb|EGH13021.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 421 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 167/338 (49%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + +GI ILIYV+ GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIGILILIYVILGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P+S +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPISGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTVRS--------LIRFFRFPSSFVIYEIFMYYVLLGMCF 192 IT G GI ++ G T S FF S + IF+Y + L + Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFDSKAAEGMQTFHEFFGLHYSSINKIIFLYLIALSLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++ + EL + Y Sbjct: 334 QGLITPESFNFLESAIILAIVVLGGMGSQLGVILAAIVMTIMPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|217425539|ref|ZP_03457032.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|217391502|gb|EEC31531.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 576] Length = 427 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 101 AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P+SA+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 161 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y + L Sbjct: 221 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 280 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 281 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 341 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 395 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427 >gi|309790093|ref|ZP_07684666.1| inner-membrane translocator [Oscillochloris trichoides DG6] gi|308227818|gb|EFO81473.1| inner-membrane translocator [Oscillochloris trichoides DG6] Length = 439 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 19/352 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L F+ Y + Q I+ A GL++VVG GLL L V YA+G Sbjct: 77 VGLAVVALGFVLPYFGTLNPYYIDVATQAGIFATLAMGLNVVVGFAGLLDLGYVAFYAVG 136 Query: 78 AYSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 AY + I + +L I + M+ G G+++GLP L+ RGDYLAI Sbjct: 137 AYLWSIFSTPQIGNMISGATPVGEGWFYLFIIIGLMVGGLFGVLLGLPVLRLRGDYLAIV 196 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV-IYEIFMY 184 TL E+ + + + N G + ++ F +Y++F Y Sbjct: 197 TLGFGEVIRVLAVNLDKPINITNGAQGIKDIERPPLFFAPALKALGFNLDNNQLYQLFFY 256 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 +++L + ++ ++ L+ + I AW IR+++ A + ++ KL AFAV ++F G Sbjct: 257 FMVLLVVLITMLVVGRLKNSRIGRAWTAIREDETAAIAQGIPLVRMKLMAFAVGASFAGA 316 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G FA+ + I+P F +I ++S+VILGG+ ++ + ++ + Sbjct: 317 MGVIFASKQLFINPPTFDLLRSISILSMVILGGLGNIPGVILGAVLVTLLNLQILPRIAE 376 Query: 305 YFNSL------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L + + L+++ R +L L Sbjct: 377 ILRTAKEAGLPIPQSFDPTQYQRLLFGLLMILMMIFRPEGILPEDRRRQELH 428 >gi|330889608|gb|EGH22269.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. mori str. 301020] Length = 421 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +T G GI D+ F G T ++ FF P + + +F+Y + L + Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKTAEGMQTFHEFFGLPYNSINKVVFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|304397873|ref|ZP_07379749.1| inner-membrane translocator [Pantoea sp. aB] gi|304354584|gb|EFM18955.1| inner-membrane translocator [Pantoea sp. aB] Length = 423 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L+L + + LIYVM GL++VVG GLL L YAIGA Sbjct: 90 LFMLALILVAVAWPFFVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L +GL W +P++ ++S G+++G P L+ RGDYLAI TL EI + +L+ Sbjct: 150 YTFALLNHYFGLGFWECLPLAGIVSALFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF I++Y V L Sbjct: 210 NNTAITGGPNGIAQIPKPSLFGLEFGRKVSEGGWNTFHDFFGLKYDPSDRVIYLYLVALL 269 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 329 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 384 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL ++ P L Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLR 415 >gi|126456719|ref|YP_001074810.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei 1106a] gi|242311946|ref|ZP_04810963.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|126230487|gb|ABN93900.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|242135185|gb|EES21588.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1106b] Length = 427 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 102/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 101 VIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P+SA+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 161 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y + L Sbjct: 221 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 280 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 281 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 341 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 395 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427 >gi|167741688|ref|ZP_02414462.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei 14] gi|167818880|ref|ZP_02450560.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei 91] gi|167848743|ref|ZP_02474251.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia pseudomallei B7210] Length = 423 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 102/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 VIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P+SA+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y + L Sbjct: 217 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 423 >gi|302187249|ref|ZP_07263922.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. syringae 642] Length = 421 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 169/338 (50%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 IT G GI ++ F G T ++ FF P + + IF+Y + L + Sbjct: 214 TDITGGPNGISNIEKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|330896318|gb|EGH28413.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. japonica str. M301072PT] gi|330937487|gb|EGH41444.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. pisi str. 1704B] Length = 421 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 168/338 (49%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 IT G GI ++ G T ++ FF P + + IF+Y + L + Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|330977942|gb|EGH77845.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 421 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 168/338 (49%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 IT G GI ++ G T ++ FF P + + IF+Y + L + Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|269928714|ref|YP_003321035.1| ABC transporter-like protein [Sphaerobacter thermophilus DSM 20745] gi|269788071|gb|ACZ40213.1| ABC transporter related protein [Sphaerobacter thermophilus DSM 20745] Length = 640 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 122/310 (39%), Gaps = 24/310 (7%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y ++ +L+ + GL ++ G G +S IGAY+ IL +RY +S Sbjct: 34 TGVLGAYHLTILNFVLLRAIVVLGLVLLTGYTGQISFGQAAFVGIGAYTSAILTTRYDIS 93 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 WL + + ++ G ++GLP L+ G YLA+ TL I +++W +T G +G Sbjct: 94 PWLALIAAMLLVGILAALVGLPLLQLEGHYLALGTLAFGLIVYTGMLEWHSLTGGPSGFS 153 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 LG T + Y+L+ + L + + IS R Sbjct: 154 GIPAFSILGITFDT--------------PRANAYLLVVITALVTWVARNVAHGRISRQAR 199 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RD+Q L KL F +++ F ++G + ++P F F ++ +++ Sbjct: 200 AVRDSQITAECLGVGTASLKLRMFVLAAVFAALSGGLYVHLIRFVNPAPFDFLYSVELLT 259 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 + ++GG+TS+ A+L + E + L L ++ Sbjct: 260 MAVVGGLTSIWGGLLGAAVLTVLTEALRS----------AVPGATGEVQLVLFGALLVVM 309 Query: 332 ILMRSHSLLR 341 ++ L Sbjct: 310 LIFWPSGLAG 319 >gi|320325673|gb|EFW81735.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. glycinea str. B076] Length = 421 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +T G GI D+ F G T ++ FF P + + +F+Y + L + Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVVFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLDPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|317494577|ref|ZP_07952990.1| branched-chain amino acid transport system/permease [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917507|gb|EFV38853.1| branched-chain amino acid transport system/permease [Enterobacteriaceae bacterium 9_2_54FAA] Length = 423 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 108/340 (31%), Positives = 164/340 (48%), Gaps = 24/340 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ +L+ + + + LIYVM GL++VVG GLL L YAIGA Sbjct: 91 LVLMLILIAAVVWPFVVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YG+ W +P++ +++ A G+++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTYALLNHYYGIGFWESLPIAGIVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + F G S FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFNRSVRDGGWGSFHEFFGLKYDPSDRIIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVITLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A IL+ EL +N Y Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVILVVSRELMRDLNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 L+ + L+++ R LL ++ P Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKF 415 >gi|289648001|ref|ZP_06479344.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. aesculi str. 2250] gi|298488779|ref|ZP_07006807.1| branched-chain amino acid transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156697|gb|EFH97789.1| branched-chain amino acid transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 421 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +T G GI D+ F G T ++ FF P + + +F+Y + L + Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVVFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|253686514|ref|YP_003015704.1| inner-membrane translocator [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753092|gb|ACT11168.1| inner-membrane translocator [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 424 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY+Y +L YGL Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ M + G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWESLPLAGMAAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + L+ +I L Sbjct: 223 SQIPKPTFFGLEFSRSARDGGWDTFHNFFGLQYDPSDRIIFLYLVALLLVVLTLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +RD++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALRDDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 388 LLLGALMVLMMIWRPQGLLPMKRPEMKLK 416 >gi|227113841|ref|ZP_03827497.1| leucine/isoleucine/valine transporter permease subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 424 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 159/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY+Y +L YGL Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ M++ G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWESLPLAGMVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + L+ +I L Sbjct: 223 SQIPKPTFFGLEFGRSARDGGWDTFHNFFGLQYDPSDRIIFLYLVALLLVVLTLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +RD++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALRDDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 388 LLLGALMVLMMIWRPQGLLPMKRPEMKLK 416 >gi|289676844|ref|ZP_06497734.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. syringae FF5] Length = 421 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 168/338 (49%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 IT G GI ++ G T ++ FF P + + IF+Y + L + Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|238755232|ref|ZP_04616577.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia ruckeri ATCC 29473] gi|238706573|gb|EEP98945.1| High-affinity branched-chain amino acid transport system permease protein [Yersinia ruckeri ATCC 29473] Length = 423 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 104/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIY+M GL++VVG GLL L YAIGAY+Y +L YGL Sbjct: 98 WPFLVSRGTVDIATLTLIYIMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 157 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 158 GFWESLPLAGLVAALFGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 217 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + L+ +I L Sbjct: 218 GQIPKPTLFGLEFSRNAKDGGWDTFHNFFGLNYDPSDRIIFLYLVALLLVILTLFVINRL 277 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 278 LRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 337 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 338 TFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNAY---------------SM 382 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 383 LLLGALMVLMMIWRPQGLLPMKRPQLKLK 411 >gi|308188471|ref|YP_003932602.1| High-affinity branched-chain amino acid transport system permease protein livM [Pantoea vagans C9-1] gi|308058981|gb|ADO11153.1| High-affinity branched-chain amino acid transport system permease protein livM [Pantoea vagans C9-1] Length = 423 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 106/341 (31%), Positives = 163/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 90 LVMAVLIIAAVAWPFLVSRGTVDIATMTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P+S M++ G+++G P L+ RGDYLAI TL EI + +L+ Sbjct: 150 YTFALLNHYYGLGFWQCLPLSGMVAALFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + FF IF+Y V L Sbjct: 210 NNTALTGGPNGISQIPKPTLFGLEFGRTPREGGWDTFHNFFGLKYDPSDRIIFLYLVALL 269 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG+ F Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLF 329 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 384 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL ++ P L Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLR 415 >gi|227329280|ref|ZP_03833304.1| leucine/isoleucine/valine transporter permease subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 424 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 159/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY+Y +L YGL Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ M++ G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWESLPLAGMVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + L+ +I L Sbjct: 223 SQIPKPTFFGLEFGRSARDGGWDTFHNFFGLQYDPSDRVIFLYLVALLLVVLTLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +RD++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALRDDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 388 LLLGALMVLMMIWRPQGLLPMKRPEMKLK 416 >gi|71735995|ref|YP_273671.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556548|gb|AAZ35759.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320327044|gb|EFW83058.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. glycinea str. race 4] gi|330877003|gb|EGH11152.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. glycinea str. race 4] Length = 421 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +T G GI D+ F G T ++ FF P + + +F+Y + L + Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVVFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|52212027|emb|CAH38034.1| high-affinity branched-chain amino acid transport system permease protein [Burkholderia pseudomallei K96243] Length = 410 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 84 AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 143 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P+SA+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 144 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 203 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y + L Sbjct: 204 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 263 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 264 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 323 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 324 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 378 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 379 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 410 >gi|257486679|ref|ZP_05640720.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330984886|gb|EGH82989.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010151|gb|EGH90207.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 421 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +T G GI D+ F G T ++ FF P + + +F+Y + L + Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVVFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|187925117|ref|YP_001896759.1| branched-chain amino acid ABC transporter inner membrane protein [Burkholderia phytofirmans PsJN] gi|187716311|gb|ACD17535.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 389 Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 149/345 (43%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + ++ + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 LTVGIITAIFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + +++P + ++ G+I+G P+L+ Sbjct: 83 YAVGAYTSALLSSPHLSSQFEWIAHLAPNGLHVPFLIIVPCAMAVAAFFGVILGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + L N G + + SL + Sbjct: 143 RGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITGIDPVHAGDFSLAQTHSLFGLQF 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYSYYYLFVLAALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F + + +SP+ F E+I+V++ V+LGGM + + +L + E Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 N + + + + +A+ L++L RS L Sbjct: 323 LRSTMGPLQNMVFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367 >gi|242277715|ref|YP_002989844.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638] gi|242120609|gb|ACS78305.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638] Length = 405 Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 96/336 (28%), Positives = 153/336 (45%), Gaps = 18/336 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K L + +L F +Y + I +IY+ GL+IVVG G+L L Sbjct: 82 KATSTLPFAVWAFAILAFAVAYPHLFGRYAQDVAINCMIYICLGLGLNIVVGLAGMLDLG 141 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + Y +GAY+Y +L + L+ WL +P+SA ++G I+G S++ RGDYLAI TL Sbjct: 142 YIAFYGLGAYTYALLSINFKLAFWLCLPISAGVAGLGACIIGYCSMRMRGDYLAIVTLGF 201 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 +EI + +L W +TNG GI + + +YYV+L Sbjct: 202 AEIVRMVLNNWMSLTNGPNGITGIKAPGAYWPDFANGFTLEHLWLKKLSL---IYYVILA 258 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L + I AW IR+++ A + + KL A+ + F GMAGAF+ Sbjct: 259 LVVFTIIAVYRLNHSRIGRAWEAIREDETAAEVMGIPTFYMKLLAYCSGACFGGMAGAFY 318 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA +SP+ F F E+ +V+S+V+LGGM S+ + LI + E+ Y Sbjct: 319 AARMRFVSPESFTFLESAMVLSMVVLGGMGSIPGVILGALALIALPEIFRDFELY----- 373 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + L++L R LL + Sbjct: 374 ----------RMLVFGGVMTLMMLFRPQGLLPPKRR 399 >gi|78067297|ref|YP_370066.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77968042|gb|ABB09422.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia sp. 383] Length = 389 Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I+ + ++ + + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 IIIGVLTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + ++++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLSSQFEWIAALAPNGLHFPFFVIVPIAMALAATFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + SL + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHIGDFSLAQTHSLFGIQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F + + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322 Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHAIFGHDVVDTEVIRQALYGLAMVVIMLYRSEGLWP 367 >gi|289626713|ref|ZP_06459667.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330867289|gb|EGH01998.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 421 Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 23/336 (6%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYSY Sbjct: 96 ALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYSYA 155 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 156 LLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNLTE 215 Query: 143 ITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +T G GI D+ F G T ++ FF P + + +F+Y + L + + Sbjct: 216 LTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVVFLYLIALLLALAA 275 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA + Sbjct: 276 LFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAARQG 335 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 336 LITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY---------- 385 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -----RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|237798831|ref|ZP_04587292.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021684|gb|EGI01741.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. oryzae str. 1_6] Length = 421 Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 168/338 (49%), Gaps = 23/338 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ F+ + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 94 LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGL W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 IT G GI ++ G T ++ FF P + + IF+Y + L + Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416 >gi|158424567|ref|YP_001525859.1| branched-chain amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331456|dbj|BAF88941.1| branched-chain amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 480 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 120/357 (33%), Positives = 179/357 (50%), Gaps = 20/357 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +A++YPLL L G +Y +GI I YVM WGL+IVVG GLL L V Y Sbjct: 110 FFAIAILYPLLAVLLSGGLTPSRYWIDLGIYIGSYVMLGWGLNIVVGLAGLLDLGYVAFY 169 Query: 75 AIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY++ +L + S W+ +PV +++ G+I+G P L+ R Sbjct: 170 AVGAYAFALLSTSVPINDWMAGHLGENFWALWSFWVCLPVCGLLAALWGVILGFPVLRLR 229 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPS 174 GDYLAI TL EI + +LI W TNG AGI + F G F Sbjct: 230 GDYLAIVTLAFGEIIRLVLINWTDFTNGAAGIASIPPISFFGIPFSSGDDGFAALFGLTF 289 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + IF+Y+V++ + L+A L LRR + AW +R+++ A SL KL+A Sbjct: 290 DPMHRIIFLYFVIVALSALTALATLRLRRMPVGRAWEALREDEIACRSLGINTTLTKLTA 349 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 FA + F G AGAFFA +SP+ F F E+ ++++IV+LGGM S +A A +IG Sbjct: 350 FATGAMFGGFAGAFFAVRVRFVSPESFTFMESAMILAIVVLGGMGSQMGVAAAAVFMIGG 409 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +E+ + F + LL D + + A+ V++ R ++ R + FL+ Sbjct: 410 MEMLRNLTFLKSDWLLGPDFDPTLYRMLIFGFAMVAVMVWRPRGIVSGRLATIFLKE 466 >gi|297566713|ref|YP_003685685.1| ABC transporter-like protein [Meiothermus silvanus DSM 9946] gi|296851162|gb|ADH64177.1| ABC transporter related protein [Meiothermus silvanus DSM 9946] Length = 589 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 120/324 (37%), Gaps = 21/324 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + L+ + + + S+G + + A GL ++ G G+ S + Sbjct: 6 LTLGAVALVLIVPLLLPASSFYLSLGNYVAFGALVALGLYLLTGMAGMTSFGQAAFMGLA 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L S G S WL +P+ +++ A +++G + + +G YL ++T+ +L Sbjct: 66 AYTTALLTSERGFSPWLTLPIGVLVAMAGAVVLGGITARLKGHYLPLSTIAWCMALYIVL 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 W +T G G+ + G + F +Y+ A Sbjct: 126 GSWTELTGGHTGLRNIPPVSVFGLELSDSRSF--------------FYLSWFFALAGAWT 171 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L + I A R + + A S KL F +S+ + G+AG +A + I+ Sbjct: 172 AWNLTNSRIGRAMRASKGDAIAAASFGVNPGALKLRVFVLSAVYAGVAGWLYAHYQQFIN 231 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F +I + + GG+ S+ + ++ G+ E + F Sbjct: 232 PSPFSLEASIKYLIAAVAGGVGSIPGVFLGAGLVTGLEEALKDILPVIFGR-------TG 284 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + L L+++ L Sbjct: 285 NYEIIAYGLILVLILMFAPKGLWP 308 >gi|167841011|ref|ZP_02467695.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia thailandensis MSMB43] Length = 423 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 161/342 (47%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ L+ F F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 AIVWALVAFGFVWPFFGSRGAVDIATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL+ W +P++A+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYALLNQYFGLTFWECLPLAALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + + S IF+Y + L Sbjct: 217 NLTSITGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHVVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + EL G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPELARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|312795315|ref|YP_004028237.1| branched-chain amino acid transport system permease protein livM [Burkholderia rhizoxinica HKI 454] gi|312167090|emb|CBW74093.1| Branched-chain amino acid transport system permease protein livM [Burkholderia rhizoxinica HKI 454] Length = 392 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 92/368 (25%), Positives = 163/368 (44%), Gaps = 18/368 (4%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ S++ D ++ LL + L +GA Y + ++YVM A GL++VV Sbjct: 11 MTRVSIKKTAKDHVVMLLVTALVVCAPLLIGAAGGP-YWVRVLDFAMLYVMLALGLNVVV 69 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISG 104 G GLL L + YA+GAY+ +L S + +SI L++PV+ ++ Sbjct: 70 GFCGLLDLGYIAFYAVGAYTAALLSSPHLTTQFEWIAHLAPGGLHVSILLIVPVAMALAA 129 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 CG+++G P+L+ RGDYLAI TL EI + + N G + + Sbjct: 130 VCGVLLGAPTLRLRGDYLAIVTLGFGEIVRIFMNNMDRPVNVTNGPKGITGIDPVQIGGF 189 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 +L + YY+ + + L+ + I AW IR+++ A ++ Sbjct: 190 NLAQTHELFGLKFPTVYLYYYLFVLCSLFVVFVCTRLQHSRIGRAWAAIREDEVAAKAMG 249 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 KL AFA+ ++F G++GA F + +SP+ F F E+++V++ V+LGGM + + Sbjct: 250 INTRNVKLLAFAMGASFGGLSGAMFGVFQGFVSPESFTFWESVVVLACVVLGGMGHIPGV 309 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLRLR 343 +L E N++ + L +A+ +++L R L Sbjct: 310 ILGAVLLAVFPEFLRSTMGPLQNAIFGHPILDTEVIRQLLYGLAMVVIMLYRPEGLWPAA 369 Query: 344 TPSNFLER 351 + L + Sbjct: 370 KHEDKLAK 377 >gi|242241264|ref|YP_002989445.1| leucine/isoleucine/valine transporter permease subunit [Dickeya dadantii Ech703] gi|242133321|gb|ACS87623.1| inner-membrane translocator [Dickeya dadantii Ech703] Length = 425 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 105/330 (31%), Positives = 156/330 (47%), Gaps = 24/330 (7%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + + LIYVM GL++VVG GLL L YAIGAY+Y +L YG Sbjct: 103 MWPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLSHYYG 162 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L W +P++ + + G ++G P L+ RGDYLAI TL EI + +L+ T G G Sbjct: 163 LGFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTGFTGGPNG 222 Query: 150 IYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 I + G + FF IF+Y V L + L+ II Sbjct: 223 ISQIPKPTLFGLEFNRASREGGWDTFHHFFGLTYDPSDRIIFLYMVALLLVLLTLFIINR 282 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ Sbjct: 283 LLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPES 342 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 FTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------S 387 Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 388 MLLLGALMVLMMIWRPQGLLPMKRPQMKLQ 417 >gi|84616855|emb|CAJ13749.1| ABC-type branched-chain amino acid transport system, permease component [Desulfococcus multivorans] Length = 408 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 168/338 (49%), Gaps = 18/338 (5%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + ++ + + + LL L + +Y + +LIY+ GL+IVVG G+L Sbjct: 79 KASRLIGAVPVWVWIGALLAAACLYPLFTGRYAQDVATNVLIYICLGLGLNIVVGLAGML 138 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L + Y +GAY+Y +L YGLS W+ +P++A ++ G I+G P+L+ RGDYLAI T Sbjct: 139 DLGYIAFYGVGAYTYALLNLHYGLSFWICLPIAAALACIAGCIIGYPTLRMRGDYLAIVT 198 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + IL W +TNG G+ V S F F ++ ++YY+ Sbjct: 199 LGFGEIVRIILNNWMTLTNGPNGLLGIKPPS---IYVPSFEAGFSFELLYIKKLQYLYYI 255 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 LG+ L+ + + L + I AW +IR+++ A + KL A+A+ + F G+AG Sbjct: 256 ALGLAILTITAVRRLNHSRIGRAWESIREDETAAELMGVNTFILKLLAYAMGALFAGLAG 315 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 AFF A +SP+ F F E+ +V+S+V+LGGM S+ I A LI + E+ Y Sbjct: 316 AFFCARMRFVSPESFTFIESAMVLSMVVLGGMASIPGIMLGAAALIVLPEVFREFETY-- 373 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 +A+ +++L R L+ + Sbjct: 374 -------------RMLAFGLAMVVMMLFRPAGLIPAKR 398 >gi|117621101|ref|YP_854640.1| leucine/isoleucine/valine transporter permease subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562508|gb|ABK39456.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 423 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 102/340 (30%), Positives = 161/340 (47%), Gaps = 24/340 (7%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 +LLF + + + LIY+M GL++VVG GLL L V YA+GAYS Sbjct: 99 AVLVLLFAVSWPFMASRGAIDLATLALIYIMLGLGLNVVVGLAGLLDLGYVGFYAVGAYS 158 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L + +GLS W +P++ + + G ++G P L+ RGDYLAI TL EI + +L Sbjct: 159 YALLNTYFGLSFWECLPIAGLTAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLNNM 218 Query: 141 KPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLGMC 191 +T G GI + G + FF + IF+Y + L + Sbjct: 219 TSLTGGPNGISGIPKPTLGGLEFNRTVKDGGFETFHEFFGIAYNANHKVIFLYLMALVLV 278 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + +I L R + AW +R+++ A SL KL+AF + + F G AG+FFA+ Sbjct: 279 IATLFVINRLLRMPLGRAWEALREDEIACKSLGLNPTIIKLTAFTIGACFAGFAGSFFAS 338 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ISP+ F F E+ IV++IV+LGGM S + A ++ + EL N Y Sbjct: 339 RQGFISPESFVFIESAIVLAIVVLGGMGSQIGVVLAAIVMTVLPELAREFNEY------- 391 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + +++ R LL + P L++ Sbjct: 392 --------RMLMFGLLMVFMMIWRPQGLLPMTRPHLELKK 423 >gi|77457473|ref|YP_346978.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas fluorescens Pf0-1] gi|77381476|gb|ABA72989.1| L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein / L-valine ABC transporter membrane protein [Pseudomonas fluorescens Pf0-1] Length = 418 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 107/339 (31%), Positives = 169/339 (49%), Gaps = 23/339 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ + + + ILIYVM GL+IVVG GLL L V YA+GAYS Sbjct: 95 IIALIIGALVWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 154 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L YGLS W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 155 YALLSHYYGLSFWICLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRNL 214 Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 IT G GI ++ F G T ++ +F + + IF+Y V L + Sbjct: 215 TDITGGPNGISNIEKPTFFGLTFERKAAEGLQTFHEYFGLEYNSINKVIFLYLVALLLAL 274 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + II L R I AW +R+++ A +L KLSAF + ++F G AG+FFAA Sbjct: 275 AALFIINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGASFAGFAGSFFAAR 334 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P+ F F E+ I+++IV+LGGM S + A ++I + E+ + Y Sbjct: 335 QGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAVVMILLPEMMREFSEY-------- 386 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L + Sbjct: 387 -------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRK 418 >gi|329295842|ref|ZP_08253178.1| leucine/isoleucine/valine transporter permease subunit [Plautia stali symbiont] Length = 423 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 161/342 (47%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 90 LLMLLVIVAAIAWPFFVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ + YG W +P++ +++GA G+++G P L+ RGDYLAI TL EI + +L+ Sbjct: 150 YTFALFNHYYGFGFWESLPLAGIVAGAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + IF+Y V L Sbjct: 210 NSTSITGGPNGIAQIPKPSLFGIKFGRRVSEGGWTTFHELTGLAYDPNHRVIFLYLVALL 269 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+ F G AG F Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAVFAGFAGTLF 329 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQLAVILAAILLVVSRELMRDLNEY----- 384 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L+++ R LL ++ P L++ Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLKQ 416 >gi|332283962|ref|YP_004415873.1| putative ABC transport protein, ATP-binding component [Pusillimonas sp. T7-7] gi|330427915|gb|AEC19249.1| putative ABC transport protein, ATP-binding component [Pusillimonas sp. T7-7] Length = 362 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 94/341 (27%), Positives = 157/341 (46%), Gaps = 4/341 (1%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 K+ +A+ +L L + + L+YVM A GL+IVVG GLL L + Sbjct: 14 KVWLGIALCGVVLAILPFVLGMAGQSWVRTMNFALLYVMLALGLNIVVGFAGLLDLGYIA 73 Query: 73 AYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 YA+GAY + +L S + L W+++P +++ G ++G P+LK RGDYLAI TL Sbjct: 74 FYAVGAYVWALLASPHFGLHLPFWIVLPAGVVLAAFFGAMLGAPTLKLRGDYLAIVTLGF 133 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 EI + + N G +R+ + R + YY+LL Sbjct: 134 GEIVRIFMNNLDAPVNITNGPQGINRIDTFAIGEFAFGRSQSLLGFRITGPEKYYYLLLF 193 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + I L+ + I AW +R+++ A ++ KL AF++ ++F G+AGA F Sbjct: 194 LTIVIVIICARLQNSRIGRAWEAVREDEVAAKAMGINTRNIKLLAFSMGASFGGVAGAMF 253 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A+ + +SP+ F +E+I+V+ +V+LGGM ++ + +L EL + +L Sbjct: 254 ASMQGFVSPESFSLTESIMVLCMVVLGGMGNIPGVILGAILLSVFPELLRAVVVPLQQTL 313 Query: 310 LK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + L AL LV++ R L L Sbjct: 314 FGDVILDPDGIRMLLFGFALVLVMIFRPAGLWPSAVRRREL 354 >gi|182417306|ref|ZP_02948646.1| high-affinity branched-chain amino acid transport system permeaseprotein LivM [Clostridium butyricum 5521] gi|237668397|ref|ZP_04528381.1| high-affinity branched-chain amino acid transport system permease protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378814|gb|EDT76333.1| high-affinity branched-chain amino acid transport system permeaseprotein LivM [Clostridium butyricum 5521] gi|237656745|gb|EEP54301.1| high-affinity branched-chain amino acid transport system permease protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 348 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 68/338 (20%), Positives = 136/338 (40%), Gaps = 37/338 (10%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 I + ++ + L + Y + QI I+++ A GL++++G G L++ Sbjct: 20 RYAITTGVLLIIYWMALLLIQKGIMDNYTLRIVKQIGIFMIAALGLNLILGFTGQLTMGH 79 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +IGAY ++ + + + + + ++S ++G P L+ +GDYLAI TL Sbjct: 80 AAFMSIGAYGSAVMTQNFNMPFAVSLVMGTVLSCIMAALIGYPILRLKGDYLAICTLGFG 139 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 EI + I+ + G G+ ++ Sbjct: 140 EIVKVIIQNIDYV-GGARGMTSIP-------------------------TKSSLLIIFLC 173 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 +++ L ++ A ++R+++ A ++ K+ AF + S G+AG +A Sbjct: 174 VAGCYALLKNLLHSSKGRAIMSVREDEIAAEAMGINTTKYKMMAFIIGSGMAGLAGGLYA 233 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 I P F FS++ +I+ V+LGGM S+S T+ILI + E G++ Sbjct: 234 HFNTFIDPVTFNFSKSFELITYVVLGGMGSISGTVLGTSILIFLPESLRGLSD------- 286 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L ++++ R +L R + Sbjct: 287 ----VLKENRMLIYAFLLVVMMIFRPDGILGSREITVK 320 >gi|126669165|ref|ZP_01740090.1| leucine/isoleucine/valine transporter subunit [Marinobacter sp. ELB17] gi|126626376|gb|EAZ97048.1| leucine/isoleucine/valine transporter subunit [Marinobacter sp. ELB17] Length = 423 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 105/340 (30%), Positives = 165/340 (48%), Gaps = 24/340 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ L++ S + + +LIYV+ A GL++VVG GLL L V YA+GAY Sbjct: 96 VLTGLVVVALFWPFFSSRGAVDLATLVLIYVILALGLNVVVGLAGLLDLGYVAFYAVGAY 155 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 ++ +L YG+S W+ +P+ A+++G G+++G P L+ RGDYLAI TL EI + +L Sbjct: 156 TFALLSQYYGVSFWMALPLGALLAGLFGLLLGFPVLRLRGDYLAIVTLGFGEIIRILLNN 215 Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 W +T G GI G S F S IF+Y + L + Sbjct: 216 WTNVTGGPNGIGGIPDPTLFGMEFGRRVKGEGNTSFHETFGIAYSGEHKVIFLYLIALVL 275 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 ++A II L + + AW +R+++ A SL + KLSAF + + F G AG FA Sbjct: 276 AIITALIIRRLMKMPVGRAWEALREDEIAARSLGLSRTAVKLSAFTIGAFFAGFAGTIFA 335 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + ISP+ F F E+ IV++IV+LGGM S + A + + EL + Y Sbjct: 336 SKQGFISPESFVFLESAIVLAIVVLGGMGSQIGVILAAIAVTILPELAREFSEY------ 389 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L+ +R L+ Sbjct: 390 ---------RMLIFGATMVLMMIWRPQGLVPMRRLHITLK 420 >gi|160879408|ref|YP_001558376.1| inner-membrane translocator [Clostridium phytofermentans ISDg] gi|160428074|gb|ABX41637.1| inner-membrane translocator [Clostridium phytofermentans ISDg] Length = 357 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 83/325 (25%), Positives = 146/325 (44%), Gaps = 28/325 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +L L S +YI ++ ++I IY+M A GL+I+VG GL+SL AIGA Sbjct: 33 LAILCGVLLLVFPKIISDRYILTISVKIGIYIMLALGLNILVGYTGLVSLGHAGFVAIGA 92 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L ++ G +L I V +++ G+++GLP+L+ G YL+I TL EI + I + Sbjct: 93 YTASLLATKLGFGFFLSILVGMVVAALAGLLLGLPTLRLSGTYLSIVTLGFGEIVKTIAM 152 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +TNG G+ G + + ++ + Sbjct: 153 NWDSVTNGTLGVKNIPSPKLFGIKLTIANHGLYYLMLAMLLIV-------------TVFC 199 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + ++ A+ I+ ++ A + + + K+ AF +S+ +AGA +A I P Sbjct: 200 YLVYKSRTGRAFLAIKTDEMAGTMMGINVTYYKVLAFVLSAVISAVAGALYATLIGYIDP 259 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F F + +++SIVILGGM ++ + ILI E+ + Y Sbjct: 260 NTFTFDVSTLILSIVILGGMGTIRGMFVGALILISFPEVSRSLMDY-------------- 305 Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343 + + L L++ R LL R Sbjct: 306 -RFVVYGLILILMMRFRPQGLLGWR 329 >gi|220926355|ref|YP_002501657.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219950962|gb|ACL61354.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 611 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 136/337 (40%), Gaps = 30/337 (8%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + + L+ + L Y+ ++ +Q Y + GL++V+G G Sbjct: 15 PTPAARRLPLGSLVYALVAAGLVALAVTMPVNGYLLNILMQAATYAIAVIGLTVVLGLCG 74 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 ++L + +GAY+ + G+S W+ + + G +G +L+ G YLA+ Sbjct: 75 QINLAQAAFFGLGAYAVGLGTVDLGVSFWICLAAGLAAALVAGAFLGASTLRLGGHYLAM 134 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 T+ +I +L+ W P+T+G G+ R Sbjct: 135 VTISFQQILTLVLVNWIPVTHGPDGVPRIQRPALFTD------------------GQAYL 176 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + L + + A I+ + RT + A R +RDN+ A + K+ AFA+ + G+ Sbjct: 177 GLCLAVLAVVAWIVWHMPRTRLGRAMRAVRDNELAAGVTGIDVYRTKVMAFAIGALLAGL 236 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G FA +SPD F F+E+I+ +++ +LGG+ S + T +LI + E + Sbjct: 237 GGGLFAGGFTYVSPDQFSFAESIVFLTMALLGGVGSPAGAVIGTGLLILIPEWLRFLKE- 295 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + +A+ L+++ + Sbjct: 296 -----------IPGLYLAIYGLAVILIVVFMPEGIWG 321 >gi|160899767|ref|YP_001565349.1| leucine/isoleucine/valine transporter permease subunit [Delftia acidovorans SPH-1] gi|160365351|gb|ABX36964.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 412 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 102/340 (30%), Positives = 161/340 (47%), Gaps = 24/340 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ LL + + + +IYVM GL+IVVG GLL L V YA+GAY Sbjct: 87 LILAALLIAVSWPFFAGRNAVDIATLAMIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 146 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L G S W +P++ + G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 147 TYALLFHWAGWSFWEALPLAGAAAAMFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLMLVN 206 Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 IT G GI + LG + + +F S + IF+Y + L + Sbjct: 207 LTSITGGPDGISSIPKPTVLGLEMTRTPSTEGGTTFHQFLGLEFSSLHMVIFLYLMALLL 266 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 ++ I L R I AW +R+++ A SL + KLSAF + + F G+ GAFFA Sbjct: 267 AVITLCISNRLVRMPIGRAWEALREDEIACRSLGLNPMKIKLSAFTLGAMFAGLGGAFFA 326 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + ++P+ F F E+ +++SIV+LGGM S + A +L + EL + Y Sbjct: 327 ARQGIVNPESFTFIESALILSIVVLGGMGSQLGVIIAAILLTVLPELAREFSEY------ 380 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + L+++ R LL +R + Sbjct: 381 ---------RMLIFGLVMVLMMIWRPQGLLPMRRHHVEVR 411 >gi|226940832|ref|YP_002795906.1| LivM [Laribacter hongkongensis HLHK9] gi|226715759|gb|ACO74897.1| LivM [Laribacter hongkongensis HLHK9] Length = 370 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 94/349 (26%), Positives = 152/349 (43%), Gaps = 4/349 (1%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + L++ +I + L + FL L+Y+M A GL+IVVG GL Sbjct: 2 MTLSRKAQIALFILCGILLAVLPFLVGKTLGNSWVRTLDFALLYIMLALGLNIVVGFAGL 61 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV---SAMISGACGMIMGLPSLKFRGDYL 122 L L + YA+GAY+Y +L S + W + A ++ G+++G P LK RGDYL Sbjct: 62 LDLGYIAFYAVGAYTYALLNSPHFDIFWAWWMILPVGAFLAAVFGIMLGTPVLKLRGDYL 121 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + L N G + + + SL + V Sbjct: 122 AIVTLGFGEIIRIFLNNLNAPVNITNGPQGINMIRPVEVAGVSLGKSLTVMGVTVNSVYL 181 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY+ L + L+ + L+ + I AW +R++ A ++ I KL AFA+ + F Sbjct: 182 YYYLFLILTILTVVVCSRLQHSRIGRAWVALREDDIAASAMGLNIRNIKLLAFALGATFG 241 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AG F++ + +SP+ F E+I+V+S+V+LGGM + + +L E+ + Sbjct: 242 GVAGGLFSSFQGFVSPESFGLLESIMVLSMVVLGGMGHIPGVILGAVLLTVTPEILRDVI 301 Query: 303 FYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L +AL LV+L+R L + Sbjct: 302 GPVQMMAFGKMLIDPENARMLLFGLALILVMLLRPEGLWPNKRRKAEFH 350 >gi|161521295|ref|YP_001584722.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189352533|ref|YP_001948160.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160345345|gb|ABX18430.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189336555|dbj|BAG45624.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 389 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 86/346 (24%), Positives = 151/346 (43%), Gaps = 17/346 (4%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 K+ + ++ F+ Y + ++YVM A GL++VVG GLL L + Sbjct: 22 KLTVGIITAAFVIAAPFVIGMAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIA 81 Query: 73 AYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLK 116 YA+GAY+ +L S + + L+IP + ++ G+++G P+L+ Sbjct: 82 FYAVGAYTTALLSSPHLSSQFEWIAHFAPNGLHVPFVLIIPCAMALAALFGVLLGAPTLR 141 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 RGDYLAI TL EI + + N G + + SL + Sbjct: 142 LRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPIHVGDFSLAQTHSLFGLS 201 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 YYV + L + L+ + I AW IR+++ A ++ KL AFA Sbjct: 202 FPSVYSYYYVFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRDVKLLAFA 261 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 + ++F G++GA F A + +SP+ F E+I+V++ V+LGGM + + +L + E Sbjct: 262 MGASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPE 321 Query: 297 LCCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + + + +A+ L++L RS L Sbjct: 322 FFRSTIGPLQHMIFGDEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367 >gi|237806915|ref|YP_002891355.1| leucine/isoleucine/valine transporter permease subunit [Tolumonas auensis DSM 9187] gi|237499176|gb|ACQ91769.1| inner-membrane translocator [Tolumonas auensis DSM 9187] Length = 415 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 107/326 (32%), Positives = 163/326 (50%), Gaps = 24/326 (7%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + + + +G ILIYVM GL+I VG GLL L V YAIGAY+Y +L GLS W Sbjct: 106 FASRNLLDLGTLILIYVMLGLGLNIQVGLAGLLDLGYVGFYAIGAYTYALLNQYLGLSFW 165 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +P++ ++ G ++G P L+ RGDYLAI TL EI + +L IT G GI Sbjct: 166 ICLPLAGGMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIMLNNLTTITGGPNGISGI 225 Query: 154 DRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 + G R+ FF IF+Y + + + L+ +I L R Sbjct: 226 PKPTLFGLEFSRRAEDGGRTFHEFFGISYDANYKIIFLYVMAVLLVLLTLLVIKRLLRMP 285 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + AW +RD++ A SL KL+AF++ +AF G AG+FFAA + ISP+ F F E Sbjct: 286 LGRAWEALRDDEIACRSLGLNPTIIKLTAFSIGAAFAGFAGSFFAARQGFISPESFTFIE 345 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + I+++IV+LGGM SL+ + A I+ + EL +FN + Sbjct: 346 SAIILAIVVLGGMGSLAGVVLAAIIMTVLPEL----------------RAFNEYRMLMFG 389 Query: 326 IALFLVILMRSHSLLRLRTPSNFLER 351 + + +++L R L+ + L + Sbjct: 390 LLMVVMMLWRPQGLVPMTRHHVELPK 415 >gi|167572373|ref|ZP_02365247.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia oklahomensis C6786] Length = 423 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 AIVWALVAIGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL+ W +P++A+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYALLNQYFGLTFWECLPLAALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSVTGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHVVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEIARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLMFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|156936385|ref|YP_001440301.1| leucine/isoleucine/valine transporter permease subunit [Cronobacter sakazakii ATCC BAA-894] gi|156534639|gb|ABU79465.1| hypothetical protein ESA_04285 [Cronobacter sakazakii ATCC BAA-894] Length = 426 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IYV+ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPLAGLVAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF I++Y V L + S +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIWLYLVALLLVVFSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|319944631|ref|ZP_08018898.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lautropia mirabilis ATCC 51599] gi|319742070|gb|EFV94490.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lautropia mirabilis ATCC 51599] Length = 415 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 101/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V ++L + + + +LIYVM A GL+IVVG GLL L V YA+GA Sbjct: 89 VLVALIILAAIVWPFFGSRNQVDIATVVLIYVMLALGLNIVVGFAGLLDLGFVGFYAVGA 148 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L G W +PVS ++ G ++G P L+ RGDYLAI TL EI + +LI Sbjct: 149 YTYALLYQWLGWGFWQALPVSGAMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLI 208 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 T G GI + G + + + + S I++Y + L Sbjct: 209 NLTDWTGGPDGISGIPKPTVFGYEMSRKASEAGAQTFHQLMGWKFSNQDMVIYLYLMALV 268 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ + L R + AW +R+++ A SL KLSAF + + F G GAFF Sbjct: 269 LALITLFVSNRLVRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFF 328 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A IL + E+ Y Sbjct: 329 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAIILTVLPEMAREFADY----- 383 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL ++ P L R Sbjct: 384 ----------RMLIFGLVMVLMMIWRPEGLLPVKRPHVELTR 415 >gi|150391808|ref|YP_001321857.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF] gi|149951670|gb|ABR50198.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF] Length = 360 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 94/329 (28%), Positives = 161/329 (48%), Gaps = 28/329 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + L L L S +Y+ + I I +Y + + L +V G G +SL YAIG Sbjct: 28 IVIALLITLVLALPYIISSQYVLRIIIMIGVYSILSLSLGLVTGYAGQVSLGHAAFYAIG 87 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL YG+S ++ +PV+AMI+ CG+++GLP+L+ G YLAI TL EI + +L Sbjct: 88 AYTSAILSVNYGISFFITVPVAAMIAALCGLLLGLPTLRLSGPYLAITTLGFGEIVRMVL 147 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 W +TNG GI R + +YY++L ++ + Sbjct: 148 SNWDRVTNGPLGISRIPRPSI-------------LGIELTLANNGLYYLILIFVAITTVV 194 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L + ++ + A +R+++ A + I + K+ AF VS+ F G+AGAF+A I Sbjct: 195 MLAIVKSKMGRAMMALREDELAATMMGIRITYYKVVAFVVSAFFSGLAGAFYAHMIRFID 254 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F +I+++SIVILGGM ++ + +A+LI E + Y Sbjct: 255 PNSFTFDTSILILSIVILGGMGTIKGMFLGSALLISFPEFARFLQAY------------- 301 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + L +++ R +L + + Sbjct: 302 --RFVVYGVVLIMMMRYRPQGILGGQKKT 328 >gi|302546241|ref|ZP_07298583.1| putative branched chain amino acid transport permease [Streptomyces hygroscopicus ATCC 53653] gi|302463859|gb|EFL26952.1| putative branched chain amino acid transport permease [Streptomyces himastatinicus ATCC 53653] Length = 579 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 88/362 (24%), Positives = 143/362 (39%), Gaps = 34/362 (9%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 RL+ L +V L+ L T+ + +G+ I I+ A GL+IVVG GL Sbjct: 212 TRLSGLTSTYRSLTLVAALVTALVFPFTQDKASYTELGVNIAIFATVALGLNIVVGLAGL 271 Query: 66 LSLNCVIAYAIGAYSYVI------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 L L V +GAY+ + W + A+ S G+++G P+L+ RG Sbjct: 272 LDLGYVAFLGVGAYTAALVSGTAASTIHVTFPFWAAMLAGALASLVFGVLIGAPTLRLRG 331 Query: 120 DYLAIATLIMSEIFQNILIKWKP-----ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 DYLAI TL EIF+ + +TNG G+ L G F F Sbjct: 332 DYLAIVTLGFGEIFRIAVSNLDGTSGPSVTNGPNGVPNIPPLEIFGFNFDDEHSFAGFTL 391 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 Y ++L + + I + I AW IR+++ A ++ KL A Sbjct: 392 DSNSN---YYLLMLLVTVIVVLIFSRAGNSRIGRAWVAIREDETAATAMGINGFRVKLIA 448 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATA 289 FA+ + G+AG +A + + P+ + F+ + +++ VILGGM ++ A Sbjct: 449 FALGATLAGVAGTIWAHVQTTVVPEQYVFAGPVPPNSTFLLAAVILGGMGTIGGPLLGAA 508 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 +L + E + Y IAL L++ R ++ R Sbjct: 509 LLFLIPEKLEFLQDY---------------QLLAFGIALILLMRFRPEGIIPNRRQQLEY 553 Query: 350 ER 351 Sbjct: 554 HE 555 >gi|167565275|ref|ZP_02358191.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia oklahomensis EO147] Length = 423 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ L+ F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 AIVWALVAIGFVWPFFGSRGAIDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL+ W +P++A+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYALLNQYFGLTFWECLPLAALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSVTGGPDGISGIPKPTVFGFEMARSASVDGAKTFHELIGLEYSGEHVVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + ++F G+ GAFF Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEIARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLMFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|270264296|ref|ZP_06192563.1| transporter [Serratia odorifera 4Rx13] gi|270041945|gb|EFA15042.1| transporter [Serratia odorifera 4Rx13] Length = 423 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 104/341 (30%), Positives = 162/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 90 LLAAAIIVAAIAWPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 150 YTYALLNHYYGLGFWESLPLAGIVTAIFGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + F G + FF +F+Y V L Sbjct: 210 NNTEITGGPNGISQIPKPTFFGLEFNRSARDGGWDTFHNFFGLKYDPSDRIVFLYLVALL 269 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 329 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ E+ +N Y Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSREMMRDLNEY----- 384 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 385 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 415 >gi|163856964|ref|YP_001631262.1| putative ABC transport protein, ATP-binding component [Bordetella petrii DSM 12804] gi|163260692|emb|CAP42994.1| putative ABC transport protein, ATP-binding component [Bordetella petrii] Length = 361 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 97/339 (28%), Positives = 155/339 (45%), Gaps = 4/339 (1%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + ++ L L + + + L+YVM A GL+IVVG GLL L + Y Sbjct: 15 LFGIVLIGVALAVLPFALGLAGQSWVRILNFALLYVMLALGLNIVVGFAGLLDLGYIAFY 74 Query: 75 AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 A+GAY++ +L S + L W ++P+S ++ G+++G P+LK RGDYLAI TL E Sbjct: 75 AVGAYAWALLASPHFGLHLPFWAILPISLGLACVFGVLLGAPTLKLRGDYLAIVTLGFGE 134 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + L N G +R+ R V YY+LLG+ Sbjct: 135 IIRIFLNNLNAPVNITNGPQGINRIDGFKVGEFMFGRTETLLGLRVTGPEKYYYLLLGIT 194 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L + + L+ + I AW IR+++ A ++ KL AFA+ ++F G+AGA FAA Sbjct: 195 LLIVLVCVRLQNSRIGRAWEAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGALFAA 254 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + +SP+ F +E+I V+ +V+LGGM ++ + +L + E + Sbjct: 255 MQGFVSPESFSLTESISVLCMVVLGGMGNIPGVILGAILLAALPEFLRATVEPLQRLVFG 314 Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 L +A+ V+L R L L Sbjct: 315 EVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353 >gi|330831656|ref|YP_004394608.1| branched-chain amino acid ABC transporter permease [Aeromonas veronii B565] gi|328806792|gb|AEB51991.1| ABC-type branched-chain amino acid transporter, permease protein [Aeromonas veronii B565] Length = 422 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 102/342 (29%), Positives = 163/342 (47%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +LLF + + + LIY+M GL++VVG GLL L V YA+GA Sbjct: 96 LTAVLVLLFAVSWPFMASRGAIDLATLTLIYIMLGLGLNVVVGLAGLLDLGYVGFYAVGA 155 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 YSY +L + +GLS W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L Sbjct: 156 YSYALLNTYFGLSFWECLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLN 215 Query: 139 KWKPITNGKAGIYVADRLYFLGTT---------VRSLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + FF + IF+Y + L Sbjct: 216 NMTTLTGGPNGISGIPKPTLGGLEFNRTVKDGGFDTFHNFFGITYNANHKVIFLYLMALV 275 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ +I L R + AW +R+++ A SL KL+AF + + F G AG+FF Sbjct: 276 LVVVTLFVINRLLRMPLGRAWEALREDEIACKSLGLNPTIIKLTAFTIGATFAGFAGSFF 335 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A+ + ISP+ F F E+ IV++IV+LGGM S + A ++ + EL N Y Sbjct: 336 ASRQGFISPESFVFIESAIVLAIVVLGGMGSQIGVVLAAIVMTVLPELAREFNEY----- 390 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + +++ R LL + P L++ Sbjct: 391 ----------RMLMFGLLMVFMMIWRPQGLLPMTRPHLELKK 422 >gi|206561046|ref|YP_002231811.1| putative transport system permease [Burkholderia cenocepacia J2315] gi|198037088|emb|CAR53009.1| putative transport system permease protein [Burkholderia cenocepacia J2315] Length = 389 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ L ++ + + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VVIGLLTAVLVIAAPIVIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + L++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHVPFLLIVPIAMALAATFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++G+ F A + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGSMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 ++L D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367 >gi|261819469|ref|YP_003257575.1| leucine/isoleucine/valine ABC transporter permease [Pectobacterium wasabiae WPP163] gi|261603482|gb|ACX85968.1| inner-membrane translocator [Pectobacterium wasabiae WPP163] Length = 424 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 109/329 (33%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY+Y +L YGL Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ M + G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWESLPLAGMAAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + FLG + FF IF+Y V L + L+ +I L Sbjct: 223 SQIPKPTFLGLEFGRSARDGGWDTFHNFFGLQYDPSDRVIFLYLVALLLVILTLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +RD++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALRDDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL + P L+ Sbjct: 388 LLLGALMVLMMIWRPQGLLPMTRPEMKLK 416 >gi|134296669|ref|YP_001120404.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134139826|gb|ABO55569.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia vietnamiensis G4] Length = 389 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 +L + ++ + + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VLIGILTAAFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + +++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLIIVPIAMALAATFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHIGGFNLSQTHSLFGFQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F A + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 ++L D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWP 367 >gi|62870127|gb|AAY18214.1| HmgF [Pseudomonas putida] Length = 431 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 92/371 (24%), Positives = 155/371 (41%), Gaps = 36/371 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 LL + + L FL + ++YV+ A GL+IV+G GLL + + YA Sbjct: 25 LLLILGFIALPFLVEAIPMLGPTWVRILGFAMLYVLLALGLNIVIGYAGLLDMGYIGFYA 84 Query: 76 IGAYSYVILGSRY-----------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 IGAY Y +L S + +W++IP++A+ + CG+++G P LK RGDYLAI Sbjct: 85 IGAYLYALLASPHLQMAGLLEAVLDWPVWVIIPLAAVAAAICGVLIGAPVLKLRGDYLAI 144 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--------------FF 170 TL EI + + N G + + + + Sbjct: 145 VTLGFGEIIRIFMNNLDQPVNLTNGPQGISNIAPMHVDFGAWAHAPGAGATPVLSLQQSW 204 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 V I Y L + L + L + I AW +R+++ A ++ Sbjct: 205 SLFGLPVSPVISYYLFFLFVVILCIVLSKRLEVSRIGRAWMALREDEVAAEAMGLNKRNL 264 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 KL AFA+ + F G++G F++ + +SP+ F E+I+V+++V+LGGM S+ + I Sbjct: 265 KLLAFAMGATFGGVSGVLFSSYQGFVSPESFTLMESIMVLAMVVLGGMGSIRGVVLGALI 324 Query: 291 LIGVVELCCGMNFYYFNSL-----------LKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 L + EL + + + L+ + + +AL LV+ R L Sbjct: 325 LSVMPELFRDLVNWVQPWVMDNVTFISRDILRNVLDASTLRMLVFGLALILVMRFRPEGL 384 Query: 340 LRLRTPSNFLE 350 L Sbjct: 385 WPSSRRRAELH 395 >gi|134293031|ref|YP_001116767.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134136188|gb|ABO57302.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia vietnamiensis G4] Length = 389 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 86/346 (24%), Positives = 151/346 (43%), Gaps = 17/346 (4%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 K+ + ++ F+ Y + ++YVM A GL++VVG GLL L + Sbjct: 22 KLTVGIITAAFVIAAPFVIGMAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIA 81 Query: 73 AYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLK 116 YA+GAY+ +L S + + L+IP + ++ G+++G P+L+ Sbjct: 82 FYAVGAYTTALLSSPHLSSQFEWIAHFAPNGLHVPFVLIIPCAMALAALFGVLLGAPTLR 141 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 RGDYLAI TL EI + + N G + + SL + Sbjct: 142 LRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPIHVGDFSLAQTHSLFGLS 201 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 YYV + L + L+ + I AW IR+++ A ++ KL AFA Sbjct: 202 FPSVYSYYYVFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRDVKLLAFA 261 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 + ++F G++GA F A + +SP+ F E+I+V++ V+LGGM + + +L + E Sbjct: 262 MGASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPE 321 Query: 297 LCCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + + + +A+ L++L RS L Sbjct: 322 FFRSTIGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367 >gi|296157149|ref|ZP_06839985.1| inner-membrane translocator [Burkholderia sp. Ch1-1] gi|295892485|gb|EFG72267.1| inner-membrane translocator [Burkholderia sp. Ch1-1] Length = 389 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 81/345 (23%), Positives = 149/345 (43%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + ++ + T Y + ++YVM A GL++VVG GLL L + Sbjct: 23 LTVGIITAICVIAAPMIIGTAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY +L S + + +++P + ++ G+++G P+L+ Sbjct: 83 YAVGAYVAALLSSPHLSTQFEWIAHLAPNGLHVPFLIIVPCAMGLAALFGVLLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + SL + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITAIDPVHLGDFSLAQTHSLFGFQF 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + + + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYSYYYLFVIAALVVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F + + +SP+ F E+I+V++ V+LGGM + + +L + E Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 N + + + + +A+ L++L RS L Sbjct: 323 LRSTMGPLQNMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367 >gi|295680831|ref|YP_003609405.1| ABC transporter [Burkholderia sp. CCGE1002] gi|295440726|gb|ADG19894.1| ABC transporter related protein [Burkholderia sp. CCGE1002] Length = 602 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 77/306 (25%), Positives = 137/306 (44%), Gaps = 30/306 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ +G+ I+ Y + GL+IVVG GLL L +AIGAY+ +L + S W Sbjct: 30 SNYVIDVGLTIVTYSILGLGLNIVVGYAGLLDLGYAAFFAIGAYTTALLETLLQFSFWET 89 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P S + G+++G P+L+ R DYLAI TL EI + + IT G GI+ Sbjct: 90 LPFSLAFAAVSGIVIGYPTLRLRSDYLAIVTLGFGEITRIVATNL-DITGGPNGIFGIAS 148 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 G + S +Y + + + + L ++ + AW +IR+ Sbjct: 149 PSLFGFEISS--------------PQALYELGMAFLVVVLVFAIRLGQSRLGRAWTSIRE 194 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A ++ + KL A+ + + G+ G+ FAA I P F + +++ ++ +V+L Sbjct: 195 DEAAAEAVGVPTLRVKLLAYVMGALIGGLGGSLFAARFGTIDPTGFTYLQSVTILIVVVL 254 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG S+ + I+ G+ E+ +N + I L +++L+R Sbjct: 255 GGRGSIPGVLLGAIIVAGLPEILRFLN---------------LWRIFAFAIGLVILMLLR 299 Query: 336 SHSLLR 341 L Sbjct: 300 PQGLWP 305 >gi|317046497|ref|YP_004114145.1| inner-membrane translocator [Pantoea sp. At-9b] gi|316948114|gb|ADU67589.1| inner-membrane translocator [Pantoea sp. At-9b] Length = 423 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 105/342 (30%), Positives = 166/342 (48%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ +++ + + + LIYVM GL++VVG GLL L YAIGA Sbjct: 90 LLMVLMIVAAVIWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YG W +P++ +++GA G+++G P L+ RGDYLAI TL EI + +L+ Sbjct: 150 YTFALLNHYYGFGFWQSLPLAGLVAGAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + F G + F IF+Y V L Sbjct: 210 NNTAITGGPNGIAQIPKPTFFGLEFGRKVSEGGWGTFHEVFGMKYDPNDRVIFLYLVALL 269 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ II L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 270 LVVLTLIIINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 329 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY----- 384 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L+++ R LL ++ P L++ Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPQLKLKQ 416 >gi|237728770|ref|ZP_04559251.1| leucine/isoleucine/valine transporter permease subunit [Citrobacter sp. 30_2] gi|226909392|gb|EEH95310.1| leucine/isoleucine/valine transporter permease subunit [Citrobacter sp. 30_2] Length = 425 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLVALLVIAVVWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + F G + FF IF+Y V L Sbjct: 211 NNTEVTGGPNGISQIPKPTFFGLEFSRTAREGSWDTFSNFFNVKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + S +I L R + AW +R+++ A SL KL+AF +S+AF G AG F Sbjct: 271 LVVFSLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|33593705|ref|NP_881349.1| putative ABC transport protein, ATP-binding component [Bordetella pertussis Tohama I] gi|33601011|ref|NP_888571.1| putative ABC transport protein, ATP-binding component [Bordetella bronchiseptica RB50] gi|33563778|emb|CAE43020.1| putative ABC transport protein, ATP-binding component [Bordetella pertussis Tohama I] gi|33575446|emb|CAE32524.1| putative ABC transport protein, ATP-binding component [Bordetella bronchiseptica RB50] gi|332383108|gb|AEE67955.1| putative ABC transport protein, ATP-binding component [Bordetella pertussis CS] Length = 362 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 4/353 (1%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ + + L +A++ +L L + + + L+YVM A GL+IVV Sbjct: 1 MTRQPNKSGLSARNLVGIALIGIVLAVLPFVLGMAGQSWVRILNFALLYVMLALGLNIVV 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 G GLL L + YA+GAY++ +L S + L W ++P++ ++ G+++G P+LK Sbjct: 61 GFAGLLDLGYIAFYAVGAYTWALLASPHFGLHLPFWAILPMALGVACVFGVLLGAPTLKL 120 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + L N G +R+ R Sbjct: 121 RGDYLAIVTLGFGEIIRIFLNNLNAPVNITNGPQGINRIDAFKVGDFVFGRTETILGIRF 180 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+L+ + L + + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 181 TGPEKYYYLLVLLTLLIIVVCVRLQNSRIGRAWEAIREDEIAAKAMGINSRNIKLLAFAM 240 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G+AGA FAA + +SP+ F +E+I V+ +V+LGGM + + IL + E Sbjct: 241 GASFGGVAGALFAAMQGFVSPESFSLTESISVLCMVVLGGMGHIPGVILGAVILAVLPEF 300 Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + + L L +A+ V+L R L L Sbjct: 301 LRAVVEPAQHLLFGAVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353 >gi|269795363|ref|YP_003314818.1| branched-chain amino acid ABC transporter permease [Sanguibacter keddieii DSM 10542] gi|269097548|gb|ACZ21984.1| ABC-type branched-chain amino acid transport system, permease component [Sanguibacter keddieii DSM 10542] Length = 439 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 79/360 (21%), Positives = 146/360 (40%), Gaps = 17/360 (4%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R ++ L LL +V L + T + Q +Y + A GL++VVG GLL Sbjct: 61 RPTQWALGLPLLVLVALLPILQIPVLTTVGTNFGGVMAQFGMYALIAIGLNVVVGQAGLL 120 Query: 67 SLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGL 112 L + YAIGAY+ +L S + +P++ I+ G+++G Sbjct: 121 DLGYIGFYAIGAYTVALLTSPSSPWNQTGEGGWLSQDWAWLAALPIAVAITALSGLLIGS 180 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF-R 171 P+L+ RGDYLAI TL EI + + IT G G+ + F Sbjct: 181 PTLRLRGDYLAIVTLGFGEIVRLLADNLDGITGGGRGLNQVAYPRLGVSETNPNGVFSAG 240 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 S + ++ Y++ + + + + L R+ + +W IR+++ A + K Sbjct: 241 SGSGALNSGVWWYWLSIVLIVAALLFVGNLERSRVGRSWVAIREDEDAAEIMGVPTFRFK 300 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L AF + ++ G +GA +A ++P F +++ + V+LGG + + ++ Sbjct: 301 LWAFVIGASIGGASGALYAGQVQFVNPTNFNVINSVLFLCAVVLGGQGNKLGVILGAFVI 360 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + + IAL ++++ R LL +R R Sbjct: 361 VYLPNFF--LGRTELFGIPIDGTQIAEYRYLFFGIALMVLMVFRPQGLLPVRQKLLTYGR 418 >gi|283835849|ref|ZP_06355590.1| high-affinity branched-chain amino acid transport protein [Citrobacter youngae ATCC 29220] gi|291068020|gb|EFE06129.1| high-affinity branched-chain amino acid transport protein [Citrobacter youngae ATCC 29220] Length = 425 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLVALLVIAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY---------EIFMYYVLLG 189 IT G GI + F G R + + + IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFSRSAREGGWDTFSNFFNVKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + S +I L R + AW +R+++ A SL KL+AF +S+AF G AG F Sbjct: 271 LVVFSLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|183598026|ref|ZP_02959519.1| hypothetical protein PROSTU_01382 [Providencia stuartii ATCC 25827] gi|188022805|gb|EDU60845.1| hypothetical protein PROSTU_01382 [Providencia stuartii ATCC 25827] Length = 427 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 103/340 (30%), Positives = 162/340 (47%), Gaps = 23/340 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + + LIYVM GL++VVG GLL L YAIGA Sbjct: 91 ILALVIVIAAIIWPFVVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YG W +P++ + + G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGFGFWESLPIAGLTAALAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 IT G GI + G + FF + IF+Y+V L + Sbjct: 211 NNTEITGGPNGISQLPKPTLFGLEFSRTAKEGWDTFHNFFGLDYNAGDRIIFLYFVALLL 270 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG FA Sbjct: 271 VLLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFA 330 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + ISP+ F F E+ V++IV+LGGM S + + A IL+ E+ +N Y Sbjct: 331 ARQGFISPESFTFVESAFVLAIVVLGGMGSQTSVILAAIILVVSREMMRDLNAY------ 384 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ L+ Sbjct: 385 ---------SMLLLGALMVLMMIWRPQGLLPMKRRQMKLK 415 >gi|311695948|gb|ADP98821.1| leucine/isoleucine/valine transporter permease subunit [marine bacterium HP15] Length = 423 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 102/341 (29%), Positives = 162/341 (47%), Gaps = 24/341 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ +++ + + +LIY+M A GL++VVG GLL L V YA+GAY Sbjct: 96 VLTGIVVLALFWPFFVSRGAVDLATLVLIYIMLALGLNVVVGLAGLLDLGYVAFYAVGAY 155 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 ++ +L G+S WL +P+ A+++ G+++G P L+ RGDYLAI TL EI + +L Sbjct: 156 TFALLSQYTGISFWLALPIGALLAALFGLVLGFPVLRLRGDYLAIVTLGFGEIIRILLNN 215 Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 W +T G GI G S F S IF+Y + L + Sbjct: 216 WTTLTGGPNGIGGIPDPTLFGMEFGRRVKEEGNTSFHETFGIAYSGEHKVIFLYLIALVL 275 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 +A +I R + AW +R+++ A SL + KLSAF + + F G AG FA Sbjct: 276 AVFTALVIRRFMRMPVGRAWEALREDEIAARSLGLSRTAVKLSAFTIGAFFAGFAGTVFA 335 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + ISP+ F F E+ I+++IV+LGGM S + A + + EL + Y Sbjct: 336 SKQGFISPESFVFLESAIILAIVVLGGMGSQIGVVLAAIAVTILPELAREFSEY------ 389 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + A+ L+++ R L+ +R L+R Sbjct: 390 ---------RMLIFGAAMVLMMVWRPQGLMPMRRIHIELKR 421 >gi|170744528|ref|YP_001773183.1| ABC transporter-like protein [Methylobacterium sp. 4-46] gi|168198802|gb|ACA20749.1| ABC transporter related [Methylobacterium sp. 4-46] Length = 608 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 70/337 (20%), Positives = 137/337 (40%), Gaps = 30/337 (8%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + + LL + Y+ ++ +Q Y + GL++V+G G Sbjct: 13 PAAPARRLPLGSLLYAALAAGIVALAVTNPVNGYLLNILMQAATYAIAVIGLTVVLGLCG 72 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 ++L + +GAY+ + G+S WL + + + G +G +L+ G YLA+ Sbjct: 73 QINLAQAAFFGLGAYAVGLGTVDLGVSFWLCLAAGMLAALVAGAFLGASTLRLGGHYLAM 132 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 T+ +I +L+ W P+T+G G+ R Sbjct: 133 VTISFQQILTLVLVNWIPVTHGPDGVPRIQRPALFSD------------------GQAYL 174 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + L + + A ++ + RT + A R +RDN+ A + K+ AFA+ + G+ Sbjct: 175 GLCLAVLAVVAWLVWHMPRTRLGRAMRAVRDNELAAGVTGIDVYRTKVMAFAIGALLAGL 234 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G FA S +SPD F F+E+I+ +++ +LGG+ S + T +LI + E + Sbjct: 235 GGGLFAGSFTYVSPDQFSFAESIVFLTMALLGGVGSPAGAVIGTGLLILIPEWLRFLKE- 293 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + +A+ L+++ + Sbjct: 294 -----------IPGLYLAIYGLAVILIVVFMPEGIWG 319 >gi|261341946|ref|ZP_05969804.1| high-affinity branched-chain amino acid transport protein [Enterobacter cancerogenus ATCC 35316] gi|288315852|gb|EFC54790.1| high-affinity branched-chain amino acid transport protein [Enterobacter cancerogenus ATCC 35316] Length = 425 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 101/330 (30%), Positives = 157/330 (47%), Gaps = 24/330 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IYV+ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFVVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ +T G GI Sbjct: 163 GFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEVTGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF I++Y V L + ++ +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGIKYDPSDRVIWLYLVALLLVVITLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLKE 417 >gi|116747832|ref|YP_844519.1| ABC transporter-like protein [Syntrophobacter fumaroxidans MPOB] gi|116696896|gb|ABK16084.1| ABC transporter related [Syntrophobacter fumaroxidans MPOB] Length = 614 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 67/333 (20%), Positives = 128/333 (38%), Gaps = 35/333 (10%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 ++ +L L V++ L Y+ + + + M GL++++ S G +SL Sbjct: 8 RQWRALLPLAVVLWGL------PLVMRNDYLLLLCNVMALNAMVVLGLNLLIASTGQVSL 61 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 Y +GAY I + + ++ + +A ++ LP+LK G YL +ATL Sbjct: 62 GHAAFYGLGAYLSAIASTTWQWPLFAALAFAAASVAVIAFLLALPTLKLEGHYLVMATLG 121 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + I + + +T G +G RL + + +RF Y + Sbjct: 122 FNIIVFICFNQMESVTGGPSGFSGIPRLALGSFALNTDLRF--------------YVFIW 167 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + ++ ++ L L + + A + I + L K+ F +S+ + +AG Sbjct: 168 TLFLVAFALTLNLLDSRLGRALKAIHQKELTAEVLGIPARRYKIVTFVLSTVYAAVAGFS 227 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 +A ISP F ++ ++++V +GGM SL T +L + E Sbjct: 228 YAHYVTFISPKTFDIFYSVQIVTMVAVGGMGSLWGGLAGTILLTALPEFLHHFED----- 282 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 H L + L V++ LL Sbjct: 283 ----------LHVLLYGLTLMGVLVFCPQGLLP 305 >gi|107023434|ref|YP_621761.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|116690516|ref|YP_836139.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|170733857|ref|YP_001765804.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|254247442|ref|ZP_04940763.1| Inner-membrane translocator [Burkholderia cenocepacia PC184] gi|105893623|gb|ABF76788.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia AU 1054] gi|116648605|gb|ABK09246.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia HI2424] gi|124872218|gb|EAY63934.1| Inner-membrane translocator [Burkholderia cenocepacia PC184] gi|169817099|gb|ACA91682.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 389 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + ++ + + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VVIGILTAAFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + L++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHVPFLLIVPIAMALAATFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++G+ F A + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGSMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 ++L D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367 >gi|283787913|ref|YP_003367778.1| high-affinity branched-chain amino acid ABC transporter permease [Citrobacter rodentium ICC168] gi|282951367|emb|CBG91066.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 425 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 104/342 (30%), Positives = 161/342 (47%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLIALLVVAVAWPFMVTRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ + + A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLAAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + FF IF+Y V L Sbjct: 211 NNTEVTGGPNGISQIPKPTLFGLEFSRTAREGGWDTFSNFFGIKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L+++ R LL + P L+R Sbjct: 386 ----------SMLMLGGLMVLMMIWRPEGLLPMTRPQLKLKR 417 >gi|186475357|ref|YP_001856827.1| inner-membrane translocator [Burkholderia phymatum STM815] gi|184191816|gb|ACC69781.1| inner-membrane translocator [Burkholderia phymatum STM815] Length = 389 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 86/345 (24%), Positives = 149/345 (43%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + ++ + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 LTVGIITAVFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + ++IP + I+ CG+I+G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLSSQFEWIAHLAPAGLHVPFLIIIPCAMAIAAICGVILGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + L N G + + SL + Sbjct: 143 RGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITGIDPIHVGDFSLAQTHSLFGLTF 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YYV + + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYSYYYVFVLCALFVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRDVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F A + +SP+ F E+I+V++ V+LGGM + + +L + E Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + + + +A+ L++L RS L Sbjct: 323 LRSTMGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367 >gi|187921066|ref|YP_001890098.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] gi|187719504|gb|ACD20727.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 389 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 84/348 (24%), Positives = 146/348 (41%), Gaps = 17/348 (4%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + L + Y + ++YVM A GL+IVVG GLL L Sbjct: 20 KKYLTISALTAIGVTALPLLIGAAAGNYGVRVLDFAMLYVMLALGLNIVVGFAGLLDLGY 79 Query: 71 VIAYAIGAYSYV----------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 + YA+GAY+ + S + W ++PV+ +++ G+ +G P+ Sbjct: 80 IAFYAVGAYTAALLTSPHLAAHFEWIGHMWPSGFHAPYWFVMPVAMVLAAIAGICLGAPT 139 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 L+ RGDYLAI TL EI + + N G + + +L F Sbjct: 140 LRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPQGITGVAPVTVAGFNLSETHAFLG 199 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 YYV + L + L+ + I AW IR+++ A ++ KL A Sbjct: 200 FQFTTVYMYYYVFVLCSLLVVWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLA 259 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 FA+ ++F G++GA FA + +SP+ F E++ V++ V+LGGM + + +L + Sbjct: 260 FAMGASFGGLSGAMFAGFQGFVSPESFTLWESVTVLACVVLGGMGHIPGVIFGAVLLAIL 319 Query: 295 VELCCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 E+ N++ + L +A+ +++L R L Sbjct: 320 PEILRSTMTPLQNAIFGHVIVDTEVIRQLLYGLAMVIIMLRRPEGLWP 367 >gi|298292106|ref|YP_003694045.1| inner-membrane translocator [Starkeya novella DSM 506] gi|296928617|gb|ADH89426.1| inner-membrane translocator [Starkeya novella DSM 506] Length = 481 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 112/357 (31%), Positives = 179/357 (50%), Gaps = 22/357 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L A+++P + +G +Y+ +GI IL YVM WGL+IVVG GLL L V Y Sbjct: 113 LFGFAILFPAIAAYGMGGLSESRYLIDLGILILTYVMLGWGLNIVVGLAGLLDLGYVAFY 172 Query: 75 AIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY+Y +L + + W+ +PV+ + +G GMI+G P L+ R Sbjct: 173 AVGAYTYALLATSEPVNAFFGGLLGETFWANWAFWICLPVAGLFAGLWGMILGFPVLRLR 232 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPS 174 GDYLAI TL EI + +LI W T G AGI R F G F Sbjct: 233 GDYLAIVTLAFGEIIRLVLINWVDFTGGGAGIASIPRATFFGIPFNSDEDGFAALFGLEF 292 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + IF+Y+V+L + ++A + LR+ + AW +R+++ A SL KL+A Sbjct: 293 DPMHRIIFLYFVILALALVTAFATVRLRKLPVGRAWEALREDEIACRSLGINTTNTKLTA 352 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 FA + F G AG FFA +SP+ F F + ++++IV+LGGM S +A A +++G Sbjct: 353 FATGAMFGGFAGCFFAVRAGFVSPESFTFDVSAMILAIVVLGGMGSQIGVALAATVMMGG 412 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +E+ + + + D ++ + A+ +++ + L+ R P+ FL+ Sbjct: 413 MEMLRNLG--FLKQIFGNDFDPSLYRMLIFGFAMVAIMVWKPRGLVSTRDPTIFLKE 467 >gi|209517251|ref|ZP_03266095.1| inner-membrane translocator [Burkholderia sp. H160] gi|209502260|gb|EEA02272.1| inner-membrane translocator [Burkholderia sp. H160] Length = 389 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 86/345 (24%), Positives = 148/345 (42%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + L ++ + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VTIGLLTAAFVVAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + +++ PV+ I+ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLSTQFEWIAQLAPGGLHAPFFIIAPVAMAIAACFGVVLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G L + SL + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGLDPIHIGDHSLAQSHSLFGFQF 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YYV + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYSYYYVFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRDVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F + +SP+ F E+I+V++ V+LGGM + + +L + E Sbjct: 263 GASFGGLSGAMFGMFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEA 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + + + +A+ L++L RS L Sbjct: 323 LRSTMGPLQHMLFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367 >gi|146313491|ref|YP_001178565.1| leucine/isoleucine/valine transporter permease subunit [Enterobacter sp. 638] gi|145320367|gb|ABP62514.1| L-isoleucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-leucine ABC transporter membrane protein [Enterobacter sp. 638] Length = 425 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 103/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IYV+ GL++VVG GLL L YAIGA Sbjct: 91 LFLIALLVAAVAWPFMVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G G+ + F G + FF I++Y V L Sbjct: 211 NNTEITGGPNGVSQIPKPTFFGLEFSRTAREGGWDTFSNFFGIKYDPSDRVIWLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ +I L R + AW +R+++ A SL KL+AF +S+AF G AG F Sbjct: 271 LVVVTLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|154247983|ref|YP_001418941.1| ABC transporter related [Xanthobacter autotrophicus Py2] gi|154162068|gb|ABS69284.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 606 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 76/327 (23%), Positives = 141/327 (43%), Gaps = 30/327 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L LL V + + + T +Y + + LIY + A GL+++VG GL+SL + Sbjct: 12 LTLLGFVALAAILVIVPLTSGNEYELRLFMLFLIYGIIAVGLNVLVGLTGLVSLGQAGLF 71 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+G+Y+ I+ +R G + ++A+++ G+++ P+++ RG YLA+ T+ I + Sbjct: 72 ALGSYTGAIVATRLGFDMISSSLIAALVAAGFGVLLAYPTVRVRGVYLAVVTIAFGLIVE 131 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 N+ I+W+ +T G G+ G + Y VL + FL+ Sbjct: 132 NVAIEWQSLTGGTTGLTSIPSPNAFGVRLSG---------------YAFYGVLAVLLFLA 176 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L+ + A + ++ A +L + AF ++ G+AG F+A Sbjct: 177 TAAAHNLKVSRYGRAMLAVSQSEIAARALGVDATAMRTLAFVAAAVTAGLAGTFYAFLNS 236 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISPD+F FS+++ + +VILGG S IL + E Sbjct: 237 YISPDIFTFSDSVRFLLMVILGGAASTFGPVLGAYILTYLPEYLQ--------------- 281 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 F + L +V+ + ++ Sbjct: 282 DFAVWQKFAYGALLLVVMFVMPRGIMG 308 >gi|327395600|dbj|BAK13022.1| high-affinity branched-chain amino acid transport system permease protein LivM [Pantoea ananatis AJ13355] Length = 423 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 163/342 (47%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ ++ + + + LIY+M GL++VVG GLL L YAIGA Sbjct: 90 LVMALMIAAAVIWPFLVSRGSVDIATLTLIYIMLGLGLNVVVGISGLLVLGYGGFYAIGA 149 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YG W +P++ +++ A G+++G P L+ RGDYLAI TL EI + +L+ Sbjct: 150 YTFALLNHYYGFGFWQSLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + F G + F IF+Y V L Sbjct: 210 NNTAITGGPNGIAQIPKPTFFGLEFGRRVSEGGWGTFHEVFGMKYDPSDRVIFLYLVALL 269 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 329 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 384 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L+++ R LL ++ P L + Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLRQ 416 >gi|254251638|ref|ZP_04944956.1| inner-membrane translocator [Burkholderia dolosa AUO158] gi|124894247|gb|EAY68127.1| inner-membrane translocator [Burkholderia dolosa AUO158] Length = 389 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 152/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + ++ + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VTIGILTAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + +++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHVPFLIIVPIAMALAATFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F A + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAVFPEF 322 Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++L D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHALFGHDVVDTEVIRQALYGLAMVIIMLYRSEGLWP 367 >gi|330818057|ref|YP_004361762.1| Inner-membrane translocator [Burkholderia gladioli BSR3] gi|327370450|gb|AEA61806.1| Inner-membrane translocator [Burkholderia gladioli BSR3] Length = 390 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 86/345 (24%), Positives = 151/345 (43%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + + + F+ Y + ++YVM A GL++VVG GLL L + Sbjct: 23 LAIGVVLAILVAAAPFVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY +L S + W+++P + ++ G+++G P+L+ Sbjct: 83 YAVGAYVAALLTSPHLTTQFAWIAAMFPNGLHTPYWIVVPCAMALAALAGVLLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + L +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPQGITGVAPLHIGGFNLSQSHTLFGFTI 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YYV + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 TSVYLYYYVFVICSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++G+ F A + +SP+ F F E+I+V++ V+LGGM + + +L E+ Sbjct: 263 GASFGGLSGSMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAVFPEV 322 Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++L + L +A+ L++L RS L Sbjct: 323 LRSTMGPLQHALFGHEIIDTEVIRQALYGLAMVLIMLYRSEGLWP 367 >gi|303246755|ref|ZP_07333032.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] gi|302491772|gb|EFL51652.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] Length = 407 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 89/323 (27%), Positives = 155/323 (47%), Gaps = 17/323 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + PL F + +Y + I +L+Y+ GL++VVG GLL L + Y +GA Sbjct: 90 MLYLPLAAFALAYPILTNRYAQDVAINVLVYICLGLGLNVVVGLCGLLDLGYIAFYGVGA 149 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L Y + W+ +P+ A+ + G I+G P+L+ RGDYLAI TL EI + ++ Sbjct: 150 YTYALLSVHYAVPFWVCLPICALFAAMAGCIIGYPTLRMRGDYLAIVTLGFGEIVRIVIN 209 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G G+ + F F ++ ++YY++L + + + Sbjct: 210 NWMDLTGGPNGVLGIKAPGIYVPSFADGS--FSFEHLYLRKLEYLYYIILALAVFTIIAV 267 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + I A+ IR+++ A + KL A+A+ + F G+AGAFFAA +SP Sbjct: 268 YRINFSRIGRAFEAIREDETAAELMGVDTFRFKLLAYALGAVFGGLAGAFFAARMRFVSP 327 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F F E+ +V+++V+LGGM S+ + L+ + E+ G Y Sbjct: 328 ESFTFIESAMVLAMVVLGGMGSIPGVILGALALVALPEVFRGFELY-------------- 373 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 A+ L++++R L Sbjct: 374 -RMLAFGGAMALMMIVRPAGLWP 395 >gi|291619271|ref|YP_003522013.1| LivM [Pantoea ananatis LMG 20103] gi|291154301|gb|ADD78885.1| LivM [Pantoea ananatis LMG 20103] Length = 423 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 163/342 (47%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ ++ + + + LIY+M GL++VVG GLL L YAIGA Sbjct: 90 LVMALMIAAAVIWPFLVSRGSVDIATLTLIYIMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YG W +P++ +++ A G+++G P L+ RGDYLAI TL EI + +L+ Sbjct: 150 YTFALLNHYYGFGFWQSLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + F G + F IF+Y V L Sbjct: 210 NNTAITGGPNGIAQIPKPTFFGLEFGRRVSEGGWGTFHEVFGMKYDPSDRVIFLYLVALL 269 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 329 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 384 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L+++ R LL ++ P L + Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLRQ 416 >gi|171316758|ref|ZP_02905970.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] gi|171098108|gb|EDT42923.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] Length = 389 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + ++ + + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VIIGILTAAFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + L++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLLIVPIAMALAATFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F + + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 ++L D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367 >gi|311107304|ref|YP_003980157.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310761993|gb|ADP17442.1| inner-membrane translocator 43 [Achromobacter xylosoxidans A8] Length = 362 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 94/339 (27%), Positives = 157/339 (46%), Gaps = 4/339 (1%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +A++ +L L + + + L+YVM + GL+IVVG GLL L + Y Sbjct: 15 LIGIALIGVVLAVLPFVIGMAGQSWVRILNFALLYVMLSLGLNIVVGFAGLLDLGYIAFY 74 Query: 75 AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 A+GAY++ +L S + L W ++P++ ++ G+++G P+LK RGDYLAI TL E Sbjct: 75 AVGAYTWALLASPHFGLHLPFWAILPIALAVACLFGVLLGAPTLKLRGDYLAIVTLGFGE 134 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + L N G +R+ + R V YY+LL + Sbjct: 135 IIRIFLNNLNAPVNITNGPQGINRIDTFKVGEFAFGRTESLLGLRVTGPEKYYYLLLAIT 194 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + + + L+ + I AW IR+++ A ++ KL AFA+ ++F G+AGA FA+ Sbjct: 195 LIIVVVCVRLQNSRIGRAWEAIREDEIAAKAMGINTRNIKLLAFAMGASFGGVAGALFAS 254 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + +SP+ F E+I ++ +V+LGGM + + IL + E + + L Sbjct: 255 MQGFVSPESFSLMESISILCMVVLGGMGHIPGVILGALILAALPEFLRAVVEPVQHMLFG 314 Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 L +A+ V+L R L L Sbjct: 315 AVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353 >gi|317154162|ref|YP_004122210.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] gi|316944413|gb|ADU63464.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] Length = 430 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 97/327 (29%), Positives = 156/327 (47%), Gaps = 26/327 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A + + L L Y ++ I L+Y++ GL+IVVG GLL L V YA+G Sbjct: 114 FAALGVVALLAGLYPQVFDLYQTNIMISCLVYIVLGLGLNIVVGLAGLLDLGYVAFYAVG 173 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+Y + + + W ++P+ A + G+I+G P L+ RGDYLAI TL EI + +L Sbjct: 174 AYAYALCNMHWDIGFWFMLPIGAALGTILGVILGFPVLRLRGDYLAIVTLGFGEIIRLVL 233 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 W +T G +GI R F + I+MYY+++G+ L+ Sbjct: 234 ENWGDVTMGPSGISNISRPGFF-----------GMKMTISDSTIYMYYIMIGLLILTIFS 282 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L+ + I AW +R+++ A ++ + KL AFA+ + + GMAG FAA I+ Sbjct: 283 VNRLQNSRIGRAWLALREDEIACQAMGIDKVKTKLLAFALGATWAGMAGVVFAAKTTFIN 342 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F F E+ +++SIV++GGM S+ + ILI V E + Sbjct: 343 PASFTFWESAMILSIVVIGGMGSIRGVIAGAIILILVPEYLREFAEF------------- 389 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRT 344 L + LV++ R L+ + Sbjct: 390 --RMLLFGAIMVLVMVFRPQGLISAKR 414 >gi|161523978|ref|YP_001578990.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189351260|ref|YP_001946888.1| branched-chain amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|221199275|ref|ZP_03572319.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD2M] gi|221205823|ref|ZP_03578838.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD2] gi|221211495|ref|ZP_03584474.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD1] gi|160341407|gb|ABX14493.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189335282|dbj|BAG44352.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221168856|gb|EEE01324.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD1] gi|221174661|gb|EEE07093.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD2] gi|221180560|gb|EEE12963.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD2M] Length = 389 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 152/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + ++ + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VTIGILTAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + +++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHVPFLIIVPIAMALAATFGVLLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F A + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAVFPEF 322 Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++L D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHALFGHDVVDTEVIRQALYGLAMVIIMLYRSEGLWP 367 >gi|239815097|ref|YP_002944007.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239801674|gb|ACS18741.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 398 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 90/358 (25%), Positives = 167/358 (46%), Gaps = 17/358 (4%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K K L L + +L L + + L+YVM + GL+IVVG GLL L Sbjct: 2 KNSKNLALYVLGVVAVLALPIFLQSQGNAWVRIADIALLYVMLSLGLNIVVGYAGLLDLG 61 Query: 70 CVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLP 113 V +A+GAY + ++GS + S+ +++P++ +++G G+++G P Sbjct: 62 YVAFFAVGAYLFALMGSSHLSETFPWFKAMFPNGLHTSLLIVVPLALVVAGVLGVMLGAP 121 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 +LK RGDYLAI TL EI + L N G + + L + ++F Sbjct: 122 TLKLRGDYLAIVTLGFGEIIRVFLNNLDQPINITNGPKGITAIDSIKFWGLDLGKAWKFD 181 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + YY+ L + + I L+ + I AW IR+++ A ++ KL Sbjct: 182 GFSISSVTLYYYLFLALVVATIIISHRLQMSRIGRAWMAIREDEIAAKAMGINTRNMKLL 241 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF + ++F G++GA FAA + +SP+ F E+++++++V+LGG+ L + +L Sbjct: 242 AFGMGASFGGVSGAMFAAFQGFVSPESFSLMESVMIVAMVVLGGIGHLPGVILGAVLLAA 301 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + E+ + ++ ++ + +A+ +++L+R L L+R Sbjct: 302 LPEVLRYVAGP-LQAMTDGRLDASILRQLFIALAMIIIMLVRPRGLWPSPEHGKTLQR 358 >gi|89093322|ref|ZP_01166271.1| high-affinity branched-chain amino acid transport protein [Oceanospirillum sp. MED92] gi|89082301|gb|EAR61524.1| high-affinity branched-chain amino acid transport protein [Oceanospirillum sp. MED92] Length = 418 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 106/341 (31%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + + + LIY+M GL+IVVG GLL L V YA+GAY Sbjct: 93 LLALLIVGMLVWPFMVSRGSVDLATLALIYIMLGLGLNIVVGLAGLLDLGFVAFYAVGAY 152 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L +G+S W +P+SA ++ G I+G P L+ RGDYLAI TL EI + +L Sbjct: 153 TYALLSQYFGMSFWACLPISAGLAALFGFILGFPVLRLRGDYLAIVTLGFGEIIRILLNN 212 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRS---------LIRFFRFPSSFVIYEIFMYYVLLGM 190 W +T G GI D+ G FF S IF+Y + + + Sbjct: 213 WTAVTGGPNGISGIDKPTLFGLEFSRRAKEEDTVLFHEFFGIDYSSSYKVIFLYLIAVIL 272 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 +I L R + AW +R+++ A SL KLSAF + + G AGAFFA Sbjct: 273 TIFVVYVINRLMRMPVGRAWEALREDEIACRSLGLNRTVIKLSAFTLGATTAGFAGAFFA 332 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + ISP+ F F E+ I+++IV+LGGM S + A I+ + EL + Y Sbjct: 333 ARQGFISPESFIFIESAIILAIVVLGGMGSQVGVILAAIIMTILPELAREFSEY------ 386 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + +++ R L+ ++ P L R Sbjct: 387 ---------RMLLFGFLMVIMMRWRPQGLVPMKRPHLELNR 418 >gi|33597167|ref|NP_884810.1| putative ABC transport protein, ATP-binding component [Bordetella parapertussis 12822] gi|33573594|emb|CAE37876.1| putative ABC transport protein, ATP-binding component [Bordetella parapertussis] Length = 362 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 96/339 (28%), Positives = 157/339 (46%), Gaps = 4/339 (1%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +A++ +L L + + + L+YVM A GL+IVVG GLL L + Y Sbjct: 15 LVGIALIGIVLAVLPFVLGMAGQSWVRILNFALLYVMLALGLNIVVGFAGLLDLGYIAFY 74 Query: 75 AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 A+GAY++ +L S + L W ++P++ ++ G+++G P+LK RGDYLAI TL E Sbjct: 75 AVGAYTWALLASPHFGLHLPFWAILPMALGVACVFGVLLGAPTLKLRGDYLAIVTLGFGE 134 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + L N G +R+ + R YY+L+ + Sbjct: 135 IIRIFLNNLNAPVNITNGPQGINRIDAFKVGDFAFGRTETILGIRFTGPEKYYYLLVLLT 194 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L + + L+ + I AW IR+++ A ++ KL AFA+ ++F G+AGA FAA Sbjct: 195 LLIIVVCVRLQNSRIGRAWEAIREDEIAAKAMGINSRNIKLLAFAMGASFGGVAGALFAA 254 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + +SP+ F +E+I V+ +V+LGGM + + IL + E + + L Sbjct: 255 MQGFVSPESFSLTESISVLCMVVLGGMGHIPGVILGAVILAVLPEFLRAVVEPAQHLLFG 314 Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 L +A+ V+L R L L Sbjct: 315 AVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353 >gi|325527363|gb|EGD04720.1| inner-membrane translocator [Burkholderia sp. TJI49] Length = 389 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + ++ + + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VVIGILTAAFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + +++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLSSQFEWIAALAPNGLHVPFLIIVPIAMALAATFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + SL + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFSLAQTHTIFGFQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYLYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F A + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322 Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++L D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHALFGHDVVDTEVIRQALYGLAMVVIMLYRSEGLWP 367 >gi|157368479|ref|YP_001476468.1| leucine/isoleucine/valine transporter permease subunit [Serratia proteamaculans 568] gi|157320243|gb|ABV39340.1| inner-membrane translocator [Serratia proteamaculans 568] Length = 427 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 90 LLAAAIIIAAVAWPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 150 YTYALLNHYYGLGFWESLPLAGIVTAIFGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + F G + FF +F+Y V L Sbjct: 210 NNTEITGGPNGISQIPKPTFFGLEFNRSVRDGGWDTFHNFFGLKYDPSDRIVFLYLVALL 269 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ +I L R + AW +R+++ A SL KL+AF +S+AF G AG F Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTKIKLTAFTISAAFAGFAGTLF 329 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F E+ V++IV+LGGM S + A +L+ E+ +N Y Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSREMMRDLNEY----- 384 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 385 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 415 >gi|209514920|ref|ZP_03263789.1| ABC transporter related [Burkholderia sp. H160] gi|209504546|gb|EEA04533.1| ABC transporter related [Burkholderia sp. H160] Length = 602 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 30/306 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ +G+ I+ Y + GL+IVVG GLL L +AIGAY+ +L + S W Sbjct: 30 SNYVVDVGLTIVTYSILGLGLNIVVGYAGLLDLGYAAFFAIGAYTTALLETLLHFSFWET 89 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P S + G+++G P+L+ R DYLAI TL EI + + IT G GI+ Sbjct: 90 LPFSLTFTAVSGIVIGYPTLRLRSDYLAIVTLGFGEITRIVATNL-DITGGPNGIFGIAS 148 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 G + S +Y + + L + L ++ + AW +IR+ Sbjct: 149 PSLFGFEISS--------------PQALYELGMAFLVLVLVFAVRLGQSRLGRAWTSIRE 194 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A ++ + KL A+ + + G+ G+ FAA I P F + +++ ++ +V+L Sbjct: 195 DEAAAEAVGVPTLRVKLLAYVMGALIGGLGGSLFAARFGTIDPTGFTYLQSVTILIVVVL 254 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG S+ + I+ G+ E+ +N + I L +++L+R Sbjct: 255 GGRGSIPGVVLGAIIVAGLPEILRFLN---------------LWRIFAFAIGLVILMLLR 299 Query: 336 SHSLLR 341 L Sbjct: 300 PQGLWP 305 >gi|70728678|ref|YP_258427.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas fluorescens Pf-5] gi|68342977|gb|AAY90583.1| high-affinity branched-chain amino acid transport protein [Pseudomonas fluorescens Pf-5] Length = 418 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 171/340 (50%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L+L + + + ILIYVM GL+IVVG GLL L V YA+GAY Sbjct: 94 IILALILGALVWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY +L +GLS W+ +P++ +++ G ++G P L+ RGDYLAI TL EI + +L Sbjct: 154 SYALLSHYFGLSFWICLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 +T G GI ++ F G T ++ FF + + IF+Y V L + Sbjct: 214 MTDLTGGPNGISNIEKPTFFGLTFERKAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLA 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 LAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ I+++IV+LGGM S + A ++I + E+ + Y Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREFSEY------- 386 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L + Sbjct: 387 --------RMLMFGAMMVLMMIWRPQGLLPMQRPHMELRK 418 >gi|110807284|ref|YP_690804.1| leucine/isoleucine/valine transporter permease subunit [Shigella flexneri 5 str. 8401] gi|110616832|gb|ABF05499.1| high-affinity branched-chain amino acid transport [Shigella flexneri 5 str. 8401] Length = 402 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + I +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 80 WPFMVSRGTVDIAILTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 139 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 140 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 199 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 200 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 259 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 260 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 319 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 320 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 364 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 365 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 393 >gi|229588874|ref|YP_002870993.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas fluorescens SBW25] gi|229360740|emb|CAY47598.1| high-affinity branched-chain amino acid ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 417 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 103/340 (30%), Positives = 165/340 (48%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + + ILIYV+ GL+IVVG GLL L V YA+GAY Sbjct: 93 IIIGLIVAALIWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 152 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L G S W+ +P++ M + G ++G P L+ RGDYLAI TL EI + L Sbjct: 153 TYALLSHYLGWSFWICLPLAGMAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 212 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVIYEIFMYYVLLGMC 191 IT G GI + F G + + +F + V +F+Y V L + Sbjct: 213 LTDITGGPNGISSIPKPTFFGLSFDRTAAEGMQTFHEYFGIDYNPVSKVVFLYLVALLLA 272 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 273 LAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTIIKLSAFTLGAAFAGFAGSFFAA 332 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ I+++IV+LGGM S + A ++I + E+ + Y Sbjct: 333 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREFSEY------- 385 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L + Sbjct: 386 --------RMLMFGAMMVLMMIWRPQGLLPMQRPHMELRK 417 >gi|170693587|ref|ZP_02884745.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|170141369|gb|EDT09539.1| inner-membrane translocator [Burkholderia graminis C4D1M] Length = 389 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 150/345 (43%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + ++ + T Y + ++YVM A GL++VVG GLL L + Sbjct: 23 LTVGIITAVLVIAAPMIIGTAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + +++P + ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLSSQFEWIAHLAPNGLHVPFLIIVPCAMGVAALFGVLLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + L N G + + SL + Sbjct: 143 RGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITAIAPVHLGDFSLSQSHSLFGFQF 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYSYYYLFVLAALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F A + +SP+ F E+I+V++ V+LGGM + + +L + E Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + + + +A+ L++L RS L Sbjct: 323 LRSTMGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367 >gi|134292088|ref|YP_001115824.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia vietnamiensis G4] gi|134135245|gb|ABO56359.1| L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein / L-valine ABC transporter membrane protein [Burkholderia vietnamiensis G4] Length = 423 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 101/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+++ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 AIIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P++A+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLSFWECLPIAALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTDLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALA 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|260599753|ref|YP_003212324.1| leucine/isoleucine/valine transporter permease subunit [Cronobacter turicensis z3032] gi|260218930|emb|CBA34285.1| High-affinity branched-chain amino acid transport system permease protein livM [Cronobacter turicensis z3032] Length = 426 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IYV+ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF I++Y V L + S +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIWLYLVALLLVVFSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|170697683|ref|ZP_02888771.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|170137431|gb|EDT05671.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] Length = 389 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + ++ + + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VIIGILTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + L++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLLIVPIAMALAATFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F + + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 ++L D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367 >gi|91976256|ref|YP_568915.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91682712|gb|ABE39014.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 444 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 117/339 (34%), Positives = 182/339 (53%), Gaps = 19/339 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +A V + FL Q+YI +GI +L YVM WGL+IVVG GLL L V YA+ Sbjct: 107 AVAPVLLIFTFLVPVIFYDQRYILDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 166 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAYSY +L + +GLS W+ +P++ +++ G+++G P L+ RGDYLAI TL EI + + Sbjct: 167 GAYSYALLATNFGLSFWVCLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLV 226 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +I W+ +T G G+ R G + L P S +F++Y++L + Sbjct: 227 IINWQSLTGGPNGVSGIPRPTLFGIPLVPGENGLAALLGIPFSPSQRLVFLFYLILALAL 286 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 ++ + LRR I AW +R+++ A +L KL+AFA + F G AGAFFA Sbjct: 287 VTNWATIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFATGAMFGGFAGAFFATR 346 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ISP+ F F E+ +V++IV+LGGM S +A A LIG EL G++ + Sbjct: 347 QGFISPESFTFQESALVLAIVVLGGMGSQLGVALAALTLIGGFELFRGLDQF-------- 398 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +++ +++ R L+ R P+ +LER Sbjct: 399 -------RMLVFGLSMVFLMVWRPRGLIGHRAPTVYLER 430 >gi|115352594|ref|YP_774433.1| inner-membrane translocator [Burkholderia ambifaria AMMD] gi|115282582|gb|ABI88099.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia ambifaria AMMD] Length = 389 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ L ++ + + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VIIGLLTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + L++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLLIVPIAMALAATFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVAGFNLSQTHSLFGFQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F + + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 ++L D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367 >gi|323527110|ref|YP_004229263.1| inner-membrane translocator [Burkholderia sp. CCGE1001] gi|323384112|gb|ADX56203.1| inner-membrane translocator [Burkholderia sp. CCGE1001] Length = 389 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 84/345 (24%), Positives = 150/345 (43%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + ++ + T Y + ++YVM A GL++VVG GLL L + Sbjct: 23 LTVGIITAVFVIAAPMIIGTAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + +++P + I+ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLSSQFEWIAQLAPNGLHVPFLIIVPCAMAIAALFGVLLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + L N G + + SL + Sbjct: 143 RGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITAIAPVHVGDFSLSQTHSLFGLQF 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYSYYYLFVLAALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F A + +SP+ F E+I+V++ V+LGGM + + +L + E Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + + + +A+ L++L RS L Sbjct: 323 LRSTMGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367 >gi|172061456|ref|YP_001809108.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] gi|171993973|gb|ACB64892.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] Length = 389 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + ++ + + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VIIGILTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + L++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLLIVPIAMALAATFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L I L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCSLLVIWICTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F + + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 ++L D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367 >gi|295097053|emb|CBK86143.1| L-leucine ABC transporter membrane protein/L-isoleucine ABC transporter membrane protein/L-valine ABC transporter membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 425 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 102/330 (30%), Positives = 158/330 (47%), Gaps = 24/330 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IYV+ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ +T G GI Sbjct: 163 GFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEVTGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF I++Y V L + ++ +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGIKYDPSDRVIWLYLVALLLVVITLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L+++ R LL + P L+R Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLKR 417 >gi|307730747|ref|YP_003907971.1| inner-membrane translocator [Burkholderia sp. CCGE1003] gi|307585282|gb|ADN58680.1| inner-membrane translocator [Burkholderia sp. CCGE1003] Length = 389 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 149/345 (43%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + ++ + + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 LTVGIITAVFVIAAPMIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + +++P + I+ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLSTQFEWIAQLAPNGLHVPFLIIVPCAMAIAALFGVLLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + L N G + + SL + Sbjct: 143 RGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITAIAPVHLGDFSLSQTHSLFGIQF 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYSYYYLFVLAALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F A + +SP+ F E+I+V++ V+LGGM + + +L + E Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322 Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + + +A+ L++L RS L Sbjct: 323 LRSTMGPLQHMIFGHEVVDTEVIRQLVYALAMVLIMLYRSEGLWP 367 >gi|91784957|ref|YP_560163.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91688911|gb|ABE32111.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 389 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 80/347 (23%), Positives = 149/347 (42%), Gaps = 17/347 (4%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ + ++ + Y + ++YVM A GL++VVG GLL L + Sbjct: 21 RTLMVGIITAIFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYI 80 Query: 72 IAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSL 115 YA+GAY +L S + + +++P + ++ G+++G P+L Sbjct: 81 AFYAVGAYVAALLSSPHLSTQFEWIAHLAPNGLHVPFLIIVPCAMALAALFGVLLGAPTL 140 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + RGDYLAI TL EI + + N G + + SL + Sbjct: 141 RLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITAIDPVHFGDFSLAQTHSLFGL 200 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 YY+ + + + L+ + I AW IR+++ A ++ KL AF Sbjct: 201 QFPSVYSYYYLFVIAALVVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAF 260 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 A+ ++F G++GA F + + +SP+ F E+I+V++ V+LGGM + + +L + Sbjct: 261 AMGASFGGLSGAMFGSFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLP 320 Query: 296 ELCCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 E N + + + + +A+ L++L RS L Sbjct: 321 EFLRSTMGPLQNMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367 >gi|239814296|ref|YP_002943206.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239800873|gb|ACS17940.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 399 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 91/358 (25%), Positives = 166/358 (46%), Gaps = 17/358 (4%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K K L L + +L L + + L+YVM + GL+IVVG GLL L Sbjct: 2 KNSKNLALYILGVVAVLALPIFLQSQGNAWVRIADIALLYVMLSLGLNIVVGYAGLLDLG 61 Query: 70 CVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLP 113 V +AIGAY + ++GS + S+ ++IP++ +++G G+++G P Sbjct: 62 YVAFFAIGAYLFALMGSSHLSDTFPWFKAMFPNGLHTSLLIVIPLALVVAGMLGVLLGAP 121 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 +LK RGDYLAI TL EI + L N G + + L + ++ Sbjct: 122 TLKLRGDYLAIVTLGFGEIIRVFLNNLDQPINITNGPKGITAIDSVKFWGLDLGKAWKLD 181 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + YY+ L + + I L+ + I AW IR+++ A ++ KL Sbjct: 182 GFSISSVTLYYYLFLALVVATIIISHRLQMSRIGRAWMAIREDEIAAKAMGINTRNMKLL 241 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF + ++F G++GA FAA + +SP+ F E+++++++V+LGG+ L + +L Sbjct: 242 AFGMGASFGGVSGAMFAAFQGFVSPESFSLMESVMIVAMVVLGGIGHLPGVILGAVLLAA 301 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + E+ + ++ ++ + +A+ +++L+R L L+R Sbjct: 302 LPEVLRYVAGP-LQAMTDGRLDASILRQLFIALAMIIIMLVRPRGLWPSPEHGKTLQR 358 >gi|330807906|ref|YP_004352368.1| high-affinity branched amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376014|gb|AEA67364.1| Putative high-affinity branched amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 418 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 108/340 (31%), Positives = 170/340 (50%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V L++ + + + ILIYVM GL+IVVG GLL L V YA+GAY Sbjct: 94 IVLGLIVVALVWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY +L +GLS W+ +P++ M++ G ++G P L+ RGDYLAI TL EI + L Sbjct: 154 SYALLSHYFGLSFWICLPIAGMMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 IT G GI ++ F G T ++ +F + + IF+Y V L + Sbjct: 214 LTDITGGPNGISNIEKPTFFGLTFERKAAEGLQTFHEYFGLEYNSINKVIFLYLVALLLA 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 274 LAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTIIKLSAFTLGAAFAGFAGSFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ I+++IV+LGGM S + A ++I + E+ + Y Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREFSEY------- 386 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L + Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRK 418 >gi|209884619|ref|YP_002288476.1| high-affinity branched-chain amino acid transport system permeaseprotein LivM (LIV-I protein M) [Oligotropha carboxidovorans OM5] gi|209872815|gb|ACI92611.1| high-affinity branched-chain amino acid transport system permeaseprotein LivM (LIV-I protein M) [Oligotropha carboxidovorans OM5] Length = 442 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 111/339 (32%), Positives = 176/339 (51%), Gaps = 19/339 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ + L +Q+Y+ + I +L Y+M WGL+IVVG GLL L V YA+ Sbjct: 106 LVVPALLIFACLAPVIFYNQRYMLDLSILVLTYIMLGWGLNIVVGLAGLLDLGYVAFYAV 165 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAYSY +L + +GLS W+ +P++ +++ G+++G P L+ RGDYLAI TL EI + + Sbjct: 166 GAYSYALLSTTFGLSFWVCLPLAGILAAFWGILLGFPVLRLRGDYLAIVTLAFGEIIRLV 225 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF----FRFPSSFVIYEIFMYYVLLGMCF 192 L+ W+ +T G GI R G + P S + ++Y++L + Sbjct: 226 LLNWQHVTGGPNGISGIPRPSLFGIPLTPGPNGLAAQLGIPFSPTHRLVLLFYIILALAL 285 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L+ + + LRR I AW +R+++ A +L KL+AFA+ + F G AGAFFA Sbjct: 286 LTNWVTIRLRRLPIGRAWEALREDEIACRALGINTTTTKLTAFAIGAMFGGFAGAFFATR 345 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ISP+ F F E+ +V++IV+LGGM S + ++ LIG EL G + Sbjct: 346 QGFISPESFTFQESALVLAIVVLGGMGSQLGVVLSSLALIGGFELFRGFEQF-------- 397 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 A+ L+++ R L+ R P+ FL + Sbjct: 398 -------RMLAFGGAMVLLMIWRPRGLIAHRDPTLFLGK 429 >gi|146339849|ref|YP_001204897.1| high-affinity branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146192655|emb|CAL76660.1| high-affinity branched-chain amino acid ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 446 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 120/338 (35%), Positives = 183/338 (54%), Gaps = 19/338 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA + FL +Q+YI +GI +L YVM WGL++VVG GLL L V YA+G Sbjct: 110 LAPALLIFTFLVPVIFYNQRYILDLGILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAVG 169 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYSY +L + +GLS W+ +P++ +++ G+++G P L+ RGDYLAI TL EI + +L Sbjct: 170 AYSYGLLSTTFGLSFWICLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLVL 229 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 I W+ +T G G+ R G + L P S +F++Y++L + L Sbjct: 230 INWQEVTGGPNGVSGIPRPTLFGIPLTPGEGGLASMLGIPFSPTHRIVFLFYLILALALL 289 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + + LRR I AW +R+++ A +L I KL+AFA + F G AGAFFA + Sbjct: 290 TNWVTIRLRRLPIGRAWEALREDEVACRALGINITTTKLTAFATGAMFGGFAGAFFATRQ 349 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ISP+ F F E+ +V++IV+LGGM S +A A +IG EL + Y Sbjct: 350 GFISPESFTFQESALVLAIVVLGGMGSQLGVALAALAMIGGFELFRSLEVY--------- 400 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +A+ LV++ R ++ R P+ FLE+ Sbjct: 401 ------RMLVFGLAMVLVMIWRPRGIVGHRAPTVFLEK 432 >gi|268590794|ref|ZP_06125015.1| high-affinity branched-chain amino acid transport protein [Providencia rettgeri DSM 1131] gi|291313573|gb|EFE54026.1| high-affinity branched-chain amino acid transport protein [Providencia rettgeri DSM 1131] Length = 423 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 23/329 (6%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY++ +L YG Sbjct: 103 WPFIVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGAYTFGLLNHYYGF 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ + + G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWESLPIAGLTAALAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + F G + FF S IF+Y+V L + L+ +I L Sbjct: 223 SQLPKPTFFGLEFSRTAKDGWDTFHNFFGLDYSPGDRIIFLYFVALLLVVLTLFVINRLL 282 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R + AW +R+++ A SL + KL++F +S+AF G AG FAA + ISP+ F Sbjct: 283 RMPLGRAWEALREDEIACRSLGLSPTRIKLTSFTISAAFAGFAGTLFAARQGFISPESFT 342 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ V++IV+LGGM S + + A IL+ E+ +N Y Sbjct: 343 FVESAFVLAIVVLGGMGSQTSVILAAIILVVSREMMRDLNQY---------------SML 387 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351 L+ + L+++ R LL ++ +++ Sbjct: 388 LLGALMVLMMIWRPQGLLPMKRRQMQVKK 416 >gi|258544252|ref|ZP_05704486.1| high-affinity branched-chain amino acid transport protein [Cardiobacterium hominis ATCC 15826] gi|258520490|gb|EEV89349.1| high-affinity branched-chain amino acid transport protein [Cardiobacterium hominis ATCC 15826] Length = 408 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 108/341 (31%), Positives = 164/341 (48%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L++ F + ++ LIYVM L+IVVG GLL L V YA+GA Sbjct: 84 VVLALLIVAAFFVPVFGSRGAVNVATLALIYVMLGLSLNIVVGYAGLLDLGHVAFYAVGA 143 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y Y IL W +P++A+++GA G+++G P L+ RGDYLAI TL EI + +L Sbjct: 144 YCYAILAQHGVG-FWTTLPIAALLTGALGLLLGFPVLRLRGDYLAIVTLGFGEIIRILLN 202 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVIYEIFMYYVLLGM 190 +TNG GI + P S IF+Y ++LG+ Sbjct: 203 NLDSLTNGPKGINNIPKPGLFNIVFTRKGGAGETPFHELVGIPFSTEQRGIFLYLIILGL 262 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 C L+ +I L R I AW +R+++ A SL KLSAFA+ +AF G+AGAF+A Sbjct: 263 CLLTLWVINRLLRMPIGRAWEALREDEIACRSLGVNTTGIKLSAFAIGAAFAGLAGAFYA 322 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + ++PD F F E+ I+++IV+LGGM S + + A L + E+ + Y Sbjct: 323 AFQGSVTPDSFTFWESAIMLAIVVLGGMGSQTGVILAALALTIIPEIAREFSQY------ 376 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R L+ + P L Sbjct: 377 ---------RMIIFGAVMVLMMIWRPQGLIPAQRPKMELPE 408 >gi|148657086|ref|YP_001277291.1| inner-membrane translocator [Roseiflexus sp. RS-1] gi|148569196|gb|ABQ91341.1| inner-membrane translocator [Roseiflexus sp. RS-1] Length = 454 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 83/352 (23%), Positives = 151/352 (42%), Gaps = 19/352 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + LL + + + + ++ A GL++VVG GLL L V +A+G Sbjct: 78 LTLGTILLAVIMPIFGVLNPFYIDVVTKAGMFAALALGLNVVVGFAGLLDLGYVAFFAVG 137 Query: 78 AYSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 AY + I + +G WL + + ++ G+++GLP L+ RGDYLAI Sbjct: 138 AYLWGIFSTPQISNIVPGMEPLHGSWFWLFLAIGLVVGALFGVLLGLPVLRLRGDYLAIV 197 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI-YEIFMY 184 TL + E+ + + N G + + + + S V Y+++ Y Sbjct: 198 TLGLGEVIRVLATNLDRPINITNGSQGIKDIGRPPLFIEPVFQSLGITISRVQEYQLYFY 257 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 +++L + L+ ++ L + I AW IR+++ A ++ ++ KL AFAV ++F G+ Sbjct: 258 FLVLIILGLTVFVVYRLNNSRIGRAWTAIREDETAAIAMGIPLVRMKLLAFAVGASFAGV 317 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G F+A + I+P F +I ++S+VILGGM S+ I+ + Sbjct: 318 MGVIFSALQTFINPPTFDLLRSIGILSMVILGGMGSIPGTMLGAVIVTLLDLQLLPRIAS 377 Query: 305 YFNSL------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 +L + L + L ++++ R LL L Sbjct: 378 ELAALQRRGVPIPAWFDPAQYQRLLFGLLLIIMMIFRPEGLLPEDRRRQELH 429 >gi|38374231|gb|AAR19310.1| putative branched-chain amino acid transporter permease protein [symbiont bacterium of Paederus fuscipes] Length = 417 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 166/339 (48%), Gaps = 24/339 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V L+L F+ + + + ILIYVM + GL+IVVG GLL L V YA+GAY Sbjct: 94 IVLALVLVAFIWPFFASRGAVDIATLILIYVMLSIGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L G W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L Sbjct: 154 TYALLAEYAGFGFWSALPIAGIMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 IT G GI + G + ++ FF + I +Y + L + Sbjct: 214 LTDITGGPNGIGSIPKPTLFGLSFERRAPGGLQTFHEFFDIDYNSNYKVILLYMIALLLV 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +I L R I AW +R+++ A +L KLSAF + + F G AG FFAA Sbjct: 274 LLALFVINRLIRMPIGRAWEALREDEVACRALGLNPTLVKLSAFTIGAGFAGFAGCFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E++++++IV+LGGM S + +++ ++E Sbjct: 334 RQGLVTPESFTFIESVMILAIVVLGGMGSQLGVILGAVVMVLLLE--------------- 378 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 F + +A+ ++++ R LL ++ P L+ Sbjct: 379 -RREFAEYRMLIFGLAMIVMMIWRPQGLLPMQRPHLELK 416 >gi|317407710|gb|EFV87641.1| ABC transporter [Achromobacter xylosoxidans C54] Length = 362 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 4/339 (1%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +A++ +L L + + + L+YVM + GL+IVVG GLL L + Y Sbjct: 15 LIGIALIGIVLAVLPFVIGMAGQSWVRILNFALLYVMLSLGLNIVVGFAGLLDLGYIAFY 74 Query: 75 AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 A+GAY++ +L S + L W ++P++ ++ G+++G P+LK RGDYLAI TL E Sbjct: 75 AVGAYTWALLASPHFGLHLPFWAILPIALAVACLFGVLLGAPTLKLRGDYLAIVTLGFGE 134 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + L N G +R+ + R V YY+LL + Sbjct: 135 IIRIFLNNLNAPVNITNGPQGINRIDTFKVGEFAFGRTESLLGIRVTGPEKYYYLLLALT 194 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + + + L+ + I AW IR+++ A ++ KL AFA+ ++F G+AGA FA+ Sbjct: 195 LIIILVCVRLQNSRIGRAWEAIREDEIAAKAMGINTRNIKLLAFAMGASFGGVAGALFAS 254 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + +SP+ F E+I ++ +V+LGGM + + IL + E + + Sbjct: 255 MQGFVSPESFSLMESISILCMVVLGGMGHIPGVILGALILAALPEFLRAVVEPVQQMVFG 314 Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 L +A+ V+L R L L Sbjct: 315 AVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353 >gi|293393962|ref|ZP_06638268.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291423522|gb|EFE96745.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 427 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 105/331 (31%), Positives = 158/331 (47%), Gaps = 24/331 (7%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 + + LIYVM GL++VVG GLL L YAIGAY+Y +L Y Sbjct: 100 VAWPFFVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYY 159 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 GL W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G Sbjct: 160 GLGFWESLPLAGIVTAAFGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTDITGGPN 219 Query: 149 GIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 GI + G + FF IF+Y V L + L+ +I Sbjct: 220 GISQIPKPTLFGLEFSRSARDGGWDTFHNFFGLQYDPSDRIIFLYLVALLLVVLTLFVIN 279 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ Sbjct: 280 RLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPE 339 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F F E+ V++IV+LGGM S + A +L+ E+ +N Y Sbjct: 340 SFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSREMMRDLNEY--------------- 384 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 385 SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 415 >gi|242279020|ref|YP_002991149.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638] gi|242121914|gb|ACS79610.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638] Length = 407 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 100/322 (31%), Positives = 158/322 (49%), Gaps = 26/322 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V + F Y ++ LIYV+ GL+IVVG GLL L V YA+GAY Sbjct: 92 AVIAVAGFAIAFPKLFSMYQVNVMTSALIYVVLGLGLNIVVGLAGLLDLGFVAFYAVGAY 151 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY ++ +G+S W+ +P+ A++ CG+++G P L+ RGDYLAI TL EI + +L Sbjct: 152 SYALMNMYWGISFWVALPLGALLGAFCGILLGFPVLRLRGDYLAIVTLGFGEIIRLVLEN 211 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W T+G AGI R F F+ FMYY++L + + ++ Sbjct: 212 WGSFTHGPAGISNIARPEFF-----------GLAKGFMAQINFMYYLMLVLVVFTIFVVN 260 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L+ + I AW+ +R+++ A ++ + KL AF++ + + GM G FAA I+P Sbjct: 261 RLKNSRIGRAWQALREDEIACQAMGIDKMKTKLMAFSLGATWAGMVGVVFAAKTTFINPA 320 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F F E+ I++SIV+LGGM S+ + +LI + E + Y Sbjct: 321 SFTFLESAIILSIVVLGGMGSILGVILGALVLILLPEYMRDFSEY--------------- 365 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 + + LV++ R L+R Sbjct: 366 RMLIFGATMVLVMVFRPQGLVR 387 >gi|213426840|ref|ZP_03359590.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 332 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 160/338 (47%), Gaps = 24/338 (7%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 LL+ + + +IY++ GL++VVG GLL L YAIGAY++ Sbjct: 1 MALLVIAVAWPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTF 60 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 61 ALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNT 120 Query: 142 PITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 IT G GI + G + FF IF+Y V L + Sbjct: 121 EITGGPNGISQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALLLVV 180 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG FAA Sbjct: 181 LSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAAR 240 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 241 QGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY-------- 292 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 293 -------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 323 >gi|323700718|ref|ZP_08112630.1| inner-membrane translocator [Desulfovibrio sp. ND132] gi|323460650|gb|EGB16515.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132] Length = 428 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 26/314 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 Y ++ I LIY++ GL+IVVG GLL L V YA+GAY+Y + + L Sbjct: 126 FPLVFNLYQTNIMITCLIYIVLGLGLNIVVGLAGLLDLGYVAFYAVGAYAYALCNMHWHL 185 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W ++PV A++ G+++G P L+ +GDYLAI TL EI + IL W +T G +GI Sbjct: 186 GFWYMLPVGAVLGAVLGLLLGFPVLRLKGDYLAIVTLGFGEIIRLILENWGDVTMGPSGI 245 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R F + ++M+Y+++G+ L+ + L+ + I AW Sbjct: 246 SSIARPG-----------LFGLELNVEGSTLYMFYIMVGLMVLTIFCVNRLQNSRIGRAW 294 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 +R+++ A ++ + KL AFA+ + + GMAG FAA I+P F F E+ I++ Sbjct: 295 LALREDEIACQAMGIDKMKTKLMAFALGATWAGMAGVVFAAKTTFINPASFTFWESAIIL 354 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 SIV++GGM S+ + ILI V E + L + L Sbjct: 355 SIVVIGGMGSIRGVIAGAVILILVPEYLREFAQF---------------RMLLFGSIMVL 399 Query: 331 VILMRSHSLLRLRT 344 V++ R L+ + Sbjct: 400 VMVFRPQGLISAKR 413 >gi|307326074|ref|ZP_07605272.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113] gi|306888296|gb|EFN19284.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113] Length = 584 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 81/348 (23%), Positives = 136/348 (39%), Gaps = 34/348 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V L+ + + + +G+ I I+ A GL+IVVG GLL L V +GAY Sbjct: 231 LVAALITAIVFPFFQDKSSFTELGVNIAIFATVALGLNIVVGLAGLLDLGYVAFLGVGAY 290 Query: 80 SYVI------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 + + W + +S G+I+G P+L+ RGDYLAI TL EIF Sbjct: 291 TAALVSGSTASTLDVRFPFWAAVIAGGAVSLIFGVIIGAPTLRLRGDYLAIVTLGFGEIF 350 Query: 134 QNILIKWKP-----ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + ++ +TNG GI L G Y ++L Sbjct: 351 RLAMLNLDGTSGPSVTNGPDGIPNIPPLEIFGFNFNDDHSIAGLSLDSNGN---YYLLML 407 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + I + I AW IR+++ A ++ KL AFA+ + G+AGA Sbjct: 408 LVTIVVVLIFSRAGNSRIGRAWVAIREDETAATAMGINGFRVKLVAFALGATLAGVAGAV 467 Query: 249 FAASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 +A + + P+ + F+ + +++ VILGGM ++ +L + + + Sbjct: 468 WAHFQSTVVPEQYVFAGPVPPNSTFLVAAVILGGMGTIGGPLLGATLLYLIPKKLEFLQD 527 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 Y IAL L++ R ++ R Sbjct: 528 Y---------------QLLAFGIALILLMRFRPEGIVPNRRQQLEYHE 560 >gi|254470000|ref|ZP_05083404.1| inner-membrane translocator [Pseudovibrio sp. JE062] gi|211960311|gb|EEA95507.1| inner-membrane translocator [Pseudovibrio sp. JE062] Length = 444 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 117/341 (34%), Positives = 181/341 (53%), Gaps = 20/341 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + +LAVV P L +LG+ S++YI + I +L YVM WGL+IVVG GLL L V Y Sbjct: 105 MLVLAVVLPFALMFWLGSRGSRQYI-DLAILVLTYVMLGWGLNIVVGLAGLLDLGYVAFY 163 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAYSY +L +G S W+ +P++ +++ G+I+G P L+ RGDYLAI TL EI + Sbjct: 164 AVGAYSYALLAHYFGFSFWICLPLAGILAAFWGIILGFPVLRLRGDYLAIVTLAFGEIIR 223 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVLLGM 190 +L+ W T G G+ R F G FF + + IF+YY++ M Sbjct: 224 VVLLNWYEFTGGPDGLSGIPRPSFFGLEFTRGEGGFADFFGLKYNSIHRIIFLYYLIFIM 283 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L+ + + LRR I AW +R+++ A +L KL+AFA+ + F G AG+FFA Sbjct: 284 AMLTNFVTMRLRRMPIGRAWEALREDEIACRALGINTTNTKLTAFALGAMFGGFAGSFFA 343 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + ISP+ F F E+ I+++IV+LGG+ S + A ++IG E Y Sbjct: 344 TRQGFISPESFTFLESAIILAIVVLGGLGSQMGVVIAAVVMIGGFEFFREFEEY------ 397 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + ++++ + L+ RTPS L + Sbjct: 398 ---------RMLVFGLIMVVIMVWKPRGLVSSRTPSVALSK 429 >gi|300936486|ref|ZP_07151406.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 21-1] gi|300458408|gb|EFK21901.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 21-1] Length = 425 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLVALLVIAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + F G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|94311414|ref|YP_584624.1| leucine/isoleucine/valine transporter permease subunit [Cupriavidus metallidurans CH34] gi|93355266|gb|ABF09355.1| leucine/isoleucine/valine transporter subunit, membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 424 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 24/341 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ LL + + + LIYV+ GL+IVVG GLL L V YA+G Y Sbjct: 99 AVWLLLAVGLVFPFLGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGGY 158 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L +GL+ W +P++A ++ G ++G P L+ RGDYLAI TL EI + +L Sbjct: 159 TYALLNQYFGLTFWECLPLAAGLAATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLNN 218 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLGM 190 +T G G+ + G + + P + IF+Y + L + Sbjct: 219 LTSLTGGPDGVSGIPKPTVFGIELARSASVEGAKTFNDLIGIPYTGQHMVIFLYLLGLLL 278 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + L R + AW +R+++ A SL KLSAF + ++F G+AGAFFA Sbjct: 279 VGFTLFVTSRLIRMPMGRAWEALREDEIACRSLGLNPTRIKLSAFTLGASFAGLAGAFFA 338 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + ++P+ F F E+ +++++V+LGGM S + A +L + E+ Y Sbjct: 339 ARQGLVTPESFTFIESALILAVVVLGGMGSQLGVILAAILLTVLPEVARDFAEY------ 392 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L R Sbjct: 393 ---------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPR 424 >gi|297519583|ref|ZP_06937969.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli OP50] Length = 377 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 55 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 114 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 115 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 174 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 175 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 234 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 235 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 294 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 295 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 339 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 340 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 368 >gi|115359177|ref|YP_776315.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia ambifaria AMMD] gi|115284465|gb|ABI89981.1| L-leucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein [Burkholderia ambifaria AMMD] Length = 423 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V++ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 VVIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P++A+ + G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAVAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|293606219|ref|ZP_06688582.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292815366|gb|EFF74484.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 362 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 92/339 (27%), Positives = 157/339 (46%), Gaps = 4/339 (1%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +A++ +L L + + + L+YVM + GL+IVVG GLL L + Y Sbjct: 15 LIGIALIGIVLAVLPFVIGMAGQSWVRILNFALLYVMLSLGLNIVVGFAGLLDLGYIAFY 74 Query: 75 AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 A+GAY++ +L S + L W ++P++ ++ G+++G P+LK RGDYLAI TL E Sbjct: 75 AVGAYTWALLASPHFGLHLPFWAILPIALAVACLFGVLLGAPTLKLRGDYLAIVTLGFGE 134 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + L N G +R+ + R YY+LL + Sbjct: 135 IIRIFLNNLNAPVNITNGPQGINRIDPFKVGEFTFGRTETLMGIRFTGPEKYYYLLLALT 194 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + + + L+ + I AW IR+++ A ++ KL AFA+ ++F G+AGA FA+ Sbjct: 195 LIIIVVCVRLQNSRIGRAWEAIREDEIAAKAMGINTRNIKLLAFAMGASFGGVAGALFAS 254 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + +SP+ F E+I ++ +V+LGGM + + IL + E + + + + Sbjct: 255 MQGFVSPESFSLMESISILCMVVLGGMGHIPGVILGALILAALPEFLRAVVEPFQHMVFG 314 Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 L +A+ V+L R L L Sbjct: 315 AVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353 >gi|238028399|ref|YP_002912630.1| inner-membrane translocator [Burkholderia glumae BGR1] gi|237877593|gb|ACR29926.1| Inner-membrane translocator [Burkholderia glumae BGR1] Length = 390 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 88/331 (26%), Positives = 149/331 (45%), Gaps = 17/331 (5%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 FL Y + ++YVM A GL++VVG GLL L + YA+GAY +L S Sbjct: 37 PFLIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAFYAVGAYVAALLTSP 96 Query: 88 Y----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + W+++PV+ ++ G+++G P+L+ RGDYLAI TL E Sbjct: 97 HLTTQFAWIAAMFPNGLHTPYWVVVPVAMALAALAGVLLGAPTLRLRGDYLAIVTLGFGE 156 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + + N G + L +L + + YYV + Sbjct: 157 IVRIFMNNLDRPINITNGPQGITGVAPLHFGSFNLSQTHTLFGFSITSVYLYYYVFVICS 216 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L + L+ + I AW IR+++ A ++ KL AFA+ ++F G++G+ F A Sbjct: 217 LLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAMGASFGGLSGSMFGA 276 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + +SP+ F F E+I+V++ V+LGGM + + +L E+ ++L Sbjct: 277 FQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAVFPEVLRSTMGPLQHALFG 336 Query: 312 FDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + L +A+ L++L RS L Sbjct: 337 HEIVDTEVIRQALYGLAMVLIMLYRSEGLWP 367 >gi|37522260|ref|NP_925637.1| branched chain amino acid ABC transporter [Gloeobacter violaceus PCC 7421] gi|35213260|dbj|BAC90632.1| glr2691 [Gloeobacter violaceus PCC 7421] Length = 369 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 99/326 (30%), Positives = 157/326 (48%), Gaps = 22/326 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + T Y+ ++ + + +Y++ A GL+IVVG GLL L + +A+GA Sbjct: 40 LLGVGLLIPALMLLTSQPSYLANVAVTVAVYMVLAMGLNIVVGLAGLLDLGYIAFFAVGA 99 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y I WL +PV+A+++ G+++G P+L RGDYLAI TL EI + L Sbjct: 100 YTYAIGAPHGLS-FWLALPVAALLAAGFGVLLGAPTLPLRGDYLAIVTLGFGEIIRISLN 158 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G AGI V I F + + +Y++ L + Sbjct: 159 NLDWLTRGPAGISGVPAP------VIPWIGAKGFTWLTLYQPLQLYFIALAFVAFVYWMT 212 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L+++ + AW IR+++ A ++ + KL AFA +A GM G FA +SP Sbjct: 213 SRLKQSRVGRAWVAIREDEIAAAAMGVDTVKLKLLAFATGAALAGMVGVLFAVQLTYVSP 272 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 D F E+++V+S+V+LGGM S+ +A ILI + E G + Y Sbjct: 273 DSFTLIESVMVVSMVVLGGMGSVPGVALGALILIVLPEALRGFSEY-------------- 318 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRT 344 L A+ LV+L+R LL R Sbjct: 319 -RLLLFGAAMILVMLIRPQGLLGERQ 343 >gi|170697113|ref|ZP_02888208.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|172063957|ref|YP_001811608.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] gi|170137949|gb|EDT06182.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|171996474|gb|ACB67392.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] Length = 423 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V++ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 VVIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P++A+ + G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|312959465|ref|ZP_07773982.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311286182|gb|EFQ64746.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 417 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 103/340 (30%), Positives = 165/340 (48%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + + ILIYV+ GL+IVVG GLL L V YA+GAY Sbjct: 93 IIIGLIVAALIWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 152 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L G S W+ +P++ M + G ++G P L+ RGDYLAI TL EI + L Sbjct: 153 TYALLSHYLGWSFWICLPLAGMAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 212 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVIYEIFMYYVLLGMC 191 IT G GI + F G + + +F + V +F+Y V L + Sbjct: 213 LTDITGGPNGISSIPKPTFFGLSFDRSAAEGMQTFHEYFGIAYNPVSKVVFLYLVALLLA 272 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + +I L R I AW +R+++ A +L KLSAF + +AF G AG+FFAA Sbjct: 273 LAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTIIKLSAFTLGAAFAGFAGSFFAA 332 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ I+++IV+LGGM S + A ++I + E+ + Y Sbjct: 333 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREFSEY------- 385 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L + Sbjct: 386 --------RMLMFGAMMVLMMIWRPQGLLPMQRPHMELRK 417 >gi|296269450|ref|YP_003652082.1| inner-membrane translocator [Thermobispora bispora DSM 43833] gi|296092237|gb|ADG88189.1| inner-membrane translocator [Thermobispora bispora DSM 43833] Length = 376 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 29/341 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ-ILIYVMFAWGLSIVVGSLGLL 66 ++ L+ + + + S+ I +V+ A GL++VVG GLL Sbjct: 37 WARWCVYGLLILLAIIAPHPAIGSFMTPESHWQSVLFSPIGTFVLLAIGLNVVVGQAGLL 96 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L V YAIGAY+ I G++YG + W ++ + ++ G+I+G P+L+ RGDYLAI T Sbjct: 97 DLGYVAFYAIGAYTMAIFGTKYGWNFWGILVIGIFMTAVSGIILGSPTLRLRGDYLAIVT 156 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + + I G GI + F F++ + YY+ Sbjct: 157 LGFGEIVRITAQNTEYI-GGARGITNIPHPNPM------------FGVEFLLDPLPYYYL 203 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 LLG +S I+ L + + AW IR+++ A + KL +F V + G G Sbjct: 204 LLGAIIVSIIIVKRLNNSRVGRAWEAIREDEDAAELMGVPTFRFKLLSFFVGAMIGGATG 263 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A+ I P F F + +++ V+LGG +L + ++ + E Y Sbjct: 264 VIWASKVIAIQPPNFPFILSATILAAVVLGGSGNLPGVILGAFLIAWLPERFREFADY-- 321 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + AL L++ +R LL R Sbjct: 322 -------------RMLVFGAALVLMMALRPEGLLPSRRRRL 349 >gi|154247976|ref|YP_001418934.1| ABC transporter related [Xanthobacter autotrophicus Py2] gi|154162061|gb|ABS69277.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 663 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 1/313 (0%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +IL + L L + Y + I I IY + GL +V G G +S+ Sbjct: 4 RRILSTGFPILGLAALAVLPFVVTSPYYLHLTITIAIYAILLLGLDVVFGYTGEVSIGHA 63 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + IGAY+ L +G+ W +P++ +++ G+++ LP+L+ G YLA+ TL Sbjct: 64 ALFGIGAYTAGCLAMHFGIGFWPALPLAIIVTALFGIVLALPALRVTGPYLAMVTLAFGT 123 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I Q ++ + +TNG GI + L+ + I F + E+ +Y+ Sbjct: 124 IVQILINEMTDLTNGPLGIKLTTPLFLDLRWLGDTIPLFDMSLKRM-KEVEYFYIAAVAL 182 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +I + + + A+ +RD+ A + ++ K+ AF VS+ F G+AGA FA Sbjct: 183 VLTLLVINRILASHLGRAFEALRDSPIASDCMGVSVYKHKVIAFVVSAGFAGLAGALFAY 242 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 S I+P+ F F ++ + V +GG S I++ + L + + + + Sbjct: 243 SEQYIAPNNFGFELSVQFLLAVTVGGRKSRLGPIIGAVIIVFLPNLLSDIVLFRYIAGTI 302 Query: 312 FDCSFNMRHTTLM 324 + + + Sbjct: 303 AVIALIAGARSFI 315 >gi|205354820|ref|YP_002228621.1| leucine/isoleucine/valine transporter permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205274601|emb|CAR39651.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629964|gb|EGE36307.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 425 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 160/341 (46%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY + GL++VVG GLL L YAIGA Sbjct: 91 LFLMALLVIAVAWPFMVSRGSVDIATMTMIYSILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSLNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|195940784|ref|ZP_03086166.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O157:H7 str. EC4024] Length = 425 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 101/329 (30%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IYV+ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ +T G GI Sbjct: 163 GFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEVTGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF I++Y V L + ++ +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGIKYDPSDRVIWLYLVALLLVVITLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|145301112|ref|YP_001143953.1| leucine/isoleucine/valine transporter permease subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142853884|gb|ABO92205.1| ABC-type branched-chain amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 422 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 102/342 (29%), Positives = 162/342 (47%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +LLF + + + LIY+M GL++VVG GLL L V YA+GA Sbjct: 96 VTAILVLLFAVSWPFMASRGAIDLATLALIYIMLGLGLNVVVGLAGLLDLGYVGFYAVGA 155 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 YSY +L + +GLS W +P++ +++ G ++G P L+ RGDYLAI TL EI + +L Sbjct: 156 YSYALLNTYFGLSFWECLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLN 215 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + FF + IF+Y + L Sbjct: 216 NMTSLTGGPNGISGIPKPTLAGLEFNRTVKDGGFGTFHDFFGIAYNANHKVIFLYLMALV 275 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + +I L R + AW +R+++ A SL KL+AF + + F G AG+FF Sbjct: 276 LVVATLFVINRLLRMPLGRAWEALREDEIACKSLGLNPTIIKLTAFTIGATFAGFAGSFF 335 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A+ + ISP+ F F E+ IV++IV+LGGM S + A ++ + EL N Y Sbjct: 336 ASRQGFISPESFVFIESAIVLAIVVLGGMGSQIGVVLAAIVMTVLPELAREFNEY----- 390 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + +++ R LL + P L++ Sbjct: 391 ----------RMLMFGLLMVFMMIWRPQGLLPMTRPHLELQK 422 >gi|34496959|ref|NP_901174.1| leucine/isoleucine/valine transport system permease [Chromobacterium violaceum ATCC 12472] gi|34102815|gb|AAQ59179.1| leucine/isoleucine/valine transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 363 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 92/354 (25%), Positives = 157/354 (44%), Gaps = 6/354 (1%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + L K + AV+ +L FL GA + + L+YVM A GL+IVV Sbjct: 1 MDLNHLSTGKKMAVFAACAVLLAVLPFLVGGALGNS--WVRIIDFALLYVMLALGLNIVV 58 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 G GLL L + YAIGAY+Y +L S + +L IP+ A + G+++G P LK Sbjct: 59 GFAGLLDLGFIAFYAIGAYTYALLSSPHFDIHWLFFLTIPLGAAFASLGGVLLGTPVLKL 118 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 +GDYLAI TL EI + + N G + + + SL + Sbjct: 119 KGDYLAIVTLGFGEIVRIFMNNLNQPVNITNGPQGINLIDPIHIGGASLGQTIELFGLSF 178 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ L + L + L+ + I AW +R++ A ++ I KL AF + Sbjct: 179 HNVYLYYYLFLALTVLVVIMAWRLQHSRIGRAWVALREDDIAAAAMGINIRNIKLLAFGL 238 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+AG FA+ + +SP+ F E+I+++++++LGGM + + +L E+ Sbjct: 239 GALSGGVAGGLFASFQGFVSPESFSLLESIMILAMIVLGGMGHIPGVILGAVVLTIAPEI 298 Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L +A+ +++L+R + + + Sbjct: 299 LRDVIGPLQMKTVGRMLIDPENARMLLFGLAMVVMMLVRPEGMWPSKRRKAEFQ 352 >gi|213420728|ref|ZP_03353794.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 314 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 103/320 (32%), Positives = 156/320 (48%), Gaps = 24/320 (7%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + +IY++ GL++VVG GLL L YAIGAY++ +L YGL W +P++ Sbjct: 1 VDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPLA 60 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++S A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI + Sbjct: 61 GLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLF 120 Query: 160 GTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 G + FF IF+Y V L + LS +I L R + AW Sbjct: 121 GLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAW 180 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F F+E+ V+ Sbjct: 181 EALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVL 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +IV+LGGM S + A +L+ EL N Y ++ + L Sbjct: 241 AIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SMLMLGGLMVL 285 Query: 331 VILMRSHSLLRLRTPSNFLE 350 +++ R LL + P L+ Sbjct: 286 MMIWRPQGLLPMTRPQLKLK 305 >gi|296105144|ref|YP_003615290.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059603|gb|ADF64341.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 425 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 101/329 (30%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IYV+ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFVVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ +T G GI Sbjct: 163 GFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEVTGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF I++Y V L + ++ +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIWLYLVALLLVVITLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|299132367|ref|ZP_07025562.1| ABC transporter related protein [Afipia sp. 1NLS2] gi|298592504|gb|EFI52704.1| ABC transporter related protein [Afipia sp. 1NLS2] Length = 598 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 77/331 (23%), Positives = 143/331 (43%), Gaps = 30/331 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++L LA + + + L T +Y + + IY + A GL+++VG GL+SL Sbjct: 3 QRLLTPLAFIALAIFLVALPFTAENEYSLRLFMLFTIYAIVALGLNVLVGLAGLISLGQA 62 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+GAY+ IL +R GL L +++GA G ++ P+++ RG YLA+ T+ Sbjct: 63 GLFALGAYTGAILATRLGLDFVLAAVAGTVVAGAFGALLAYPTVRVRGVYLAVITIAFGL 122 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I +N++I+W +T G GI + G + Y VL + Sbjct: 123 IVENVIIEWHHLTGGTTGISSIPKPTLFGWPLGGFRY---------------YSVLAVLL 167 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 FL + ++++ A + ++ A ++ + AF +++A G+ G +A Sbjct: 168 FLVVLVTHNIKQSRYGRAMLAVSQSETAARGTGLNVVSVRTLAFVIAAATAGLGGVLYAF 227 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ISPD F F+++I + +V+LGG S +L + E + ++ Sbjct: 228 LNLYISPDSFTFNDSIRFLLMVVLGGAGSTVGALLGALVLTYLPEYLQQLQYWQQ----- 282 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L LV+ + H + Sbjct: 283 ----------FAYGLLLALVMFVLPHGIFGT 303 >gi|74314056|ref|YP_312475.1| leucine/isoleucine/valine transporter permease subunit [Shigella sonnei Ss046] gi|73857533|gb|AAZ90240.1| high-affinity branched-chain amino acid transport [Shigella sonnei Ss046] gi|323164784|gb|EFZ50576.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella sonnei 53G] Length = 425 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|62182061|ref|YP_218478.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62129694|gb|AAX67397.1| ABC superfamily (membrane), branched-chain amino acid transporter, high-affinity [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716549|gb|EFZ08120.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 425 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLMALLVIAVAWPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQSPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|317404909|gb|EFV85277.1| high-affinity branched-chain amino acid transport system [Achromobacter xylosoxidans C54] Length = 411 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ +L + + + +LIYVM GL+IVVG GLL L V YA+GA Sbjct: 85 LLMLLILAVAVTWPFFAGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGA 144 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L G S W +P S ++ G ++G P L+ RGDYLAI TL E+ + +LI Sbjct: 145 YTYALLYHWGGWSFWEALPFSGAMAALFGFVLGFPVLRLRGDYLAIVTLGFGEMIRLLLI 204 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + FF I++Y + L Sbjct: 205 NLNTLTGGPDGISGIPKPSVFGLEMTRRASEEGATTFHDFFGLTFQNQHMVIYLYMMALL 264 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ + L R + AW +R+++ A SL KLSAF + + F G GAFF Sbjct: 265 LALVTLFVSTRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGATFAGFGGAFF 324 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + EL Y Sbjct: 325 AARQGMVNPESFTFIESALILAIVVLGGMGSQVGVILAAILLTVLPELAREFAEY----- 379 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL ++ P L + Sbjct: 380 ----------RMLMFGLVMVLMMMWRPQGLLPMKRPHVELAK 411 >gi|16762741|ref|NP_458358.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144228|ref|NP_807570.1| leucine/isoleucine/valine transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161616607|ref|YP_001590572.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549223|ref|ZP_02342982.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168232706|ref|ZP_02657764.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168235153|ref|ZP_02660211.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168241711|ref|ZP_02666643.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260711|ref|ZP_02682684.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465160|ref|ZP_02699052.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818624|ref|ZP_02830624.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194450660|ref|YP_002047587.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470090|ref|ZP_03076074.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736808|ref|YP_002116496.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|198242024|ref|YP_002217520.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389273|ref|ZP_03215885.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928724|ref|ZP_03219923.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207858800|ref|YP_002245451.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213053211|ref|ZP_03346089.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213649991|ref|ZP_03380044.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224585353|ref|YP_002639152.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|289829439|ref|ZP_06547051.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25513242|pir||AH0992 high-affinity branched-chain amino acid transport system permease protein STY4250 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505047|emb|CAD08068.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139865|gb|AAO71430.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161365971|gb|ABX69739.1| hypothetical protein SPAB_04424 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194408964|gb|ACF69183.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456454|gb|EDX45293.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712310|gb|ACF91531.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632403|gb|EDX50887.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197291619|gb|EDY30971.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936540|gb|ACH73873.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199606371|gb|EDZ04916.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322157|gb|EDZ07355.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205325718|gb|EDZ13557.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205333064|gb|EDZ19828.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338944|gb|EDZ25708.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344569|gb|EDZ31333.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350368|gb|EDZ36999.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710603|emb|CAR34961.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469881|gb|ACN47711.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320087972|emb|CBY97734.1| High-affinity branched-chain amino acid transport system permease protein livM LIV-I protein M [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322614071|gb|EFY11007.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617963|gb|EFY14856.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625423|gb|EFY22249.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629888|gb|EFY26661.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632223|gb|EFY28974.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636426|gb|EFY33133.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643175|gb|EFY39748.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322651260|gb|EFY47644.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652827|gb|EFY49166.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659129|gb|EFY55381.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663169|gb|EFY59373.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668656|gb|EFY64809.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674541|gb|EFY70634.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678254|gb|EFY74315.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682490|gb|EFY78511.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684203|gb|EFY80209.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192242|gb|EFZ77474.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196331|gb|EFZ81483.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201867|gb|EFZ86930.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206410|gb|EFZ91371.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212003|gb|EFZ96830.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216908|gb|EGA01631.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222308|gb|EGA06691.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224322|gb|EGA08611.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228250|gb|EGA12381.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233482|gb|EGA17575.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237056|gb|EGA21123.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243729|gb|EGA27745.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246029|gb|EGA30016.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250805|gb|EGA34683.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255816|gb|EGA39566.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261908|gb|EGA45475.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267700|gb|EGA51182.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268580|gb|EGA52047.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625301|gb|EGE31646.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 425 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLMALLVIAVAWPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|167585724|ref|ZP_02378112.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 388 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 151/345 (43%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + ++ + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VTIGILTAAFVIAAPVIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + +++P++ I+ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTTQFEWIAQLAPGGLHVPFLIIVPIAMAIAAIFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + SL + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHAGDFSLAQTHSLFGIQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCALLVIWTCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F + + +SP+ F F E+I+V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322 Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ D + L +A+ +++L RS L Sbjct: 323 LRSTMSPLQHAIFGHDVVDTEVIRQALYGLAMVIIMLYRSEGLWP 367 >gi|146308849|ref|YP_001189314.1| ABC transporter related [Pseudomonas mendocina ymp] gi|145577050|gb|ABP86582.1| monosaccharide ABC transporter ATP-binding protein, CUT2 family [Pseudomonas mendocina ymp] Length = 830 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 70/321 (21%), Positives = 129/321 (40%), Gaps = 32/321 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L L A Y + + + GL+I++G G +S + YAIGAY Sbjct: 13 LAALALLGSSLAFVLDSYSLLVFTFCALAAVVGVGLNILMGLSGQISFGHIAFYAIGAYI 72 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L L + ++ + SG G ++ LP+L+ G YLA+ T+ + + + LI+W Sbjct: 73 SALLLMAGLPLG-LALIIAGLGSGLVGALLALPALRVTGPYLAMVTIAFAFMVHHGLIEW 131 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T G G+ + + + + + + + Sbjct: 132 QSLTGGANGLIGIPMPA----------------FGGLDGNVGLALLATALMVAALAFYRR 175 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L+ + A R ++ + A SL + K AFA+S+ GMAG A ISPD Sbjct: 176 LQGSGWGRAMRAVKSTEIAARSLGFNPMQTKTLAFALSATLTGMAGGLVAPLMMFISPDS 235 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F FS++I+ + VI+GG +L +++ + E+ G+ Y Sbjct: 236 FPFSQSILFVLAVIVGGSGTLFGPVLGALLIVLLPEMLSGLAEY---------------R 280 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + + L V+ + +L Sbjct: 281 LLIFSMLLLAVLWLAPRGVLG 301 >gi|33597487|ref|NP_885130.1| leucine/isoleucine/valine transporter permease subunit [Bordetella parapertussis 12822] gi|33601883|ref|NP_889443.1| leucine/isoleucine/valine transporter permease subunit [Bordetella bronchiseptica RB50] gi|33573915|emb|CAE38231.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella parapertussis] gi|33576320|emb|CAE33399.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella bronchiseptica RB50] Length = 412 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 100/341 (29%), Positives = 159/341 (46%), Gaps = 24/341 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V L+ + S + + +LIYVM GL+IVVG GLL L V YA+GAY Sbjct: 87 LVVLLIAVAVIWPFFSGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 146 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L G S W +P S ++ G ++G P L+ RGDYLAI TL EI + +LI Sbjct: 147 TYALLYHWGGWSFWEALPFSGAVAALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLIN 206 Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 +T G GI + LG + ++ + I++Y + L + Sbjct: 207 LNMLTGGPDGISGLPKPSVLGMEMARRASTEGGQTFHEIMGWTFQNQHMVIYLYLMALAL 266 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + L R + AW +R+++ A SL KLSAF + + F G GAFFA Sbjct: 267 ALATLFVSTRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFFA 326 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + ++P+ F F E+ ++++IV+LGGM S + A +L + EL Y Sbjct: 327 ARQGMVNPESFTFIESALILAIVVLGGMGSQIGVILAAILLTVLPELAREFAEY------ 380 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL ++ P L + Sbjct: 381 ---------RMLMFGLVMVLMMMWRPQGLLPMKRPHVELRK 412 >gi|171320826|ref|ZP_02909830.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] gi|171093926|gb|EDT39043.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] Length = 423 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V++ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 VVIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P++A+ + G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLSFWACLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|16766848|ref|NP_462463.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167990775|ref|ZP_02571874.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|194443944|ref|YP_002042807.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197249368|ref|YP_002148485.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263942|ref|ZP_03164016.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|238910436|ref|ZP_04654273.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|266477|sp|P30296|LIVM_SALTY RecName: Full=High-affinity branched-chain amino acid transport system permease protein livM; AltName: Full=LIV-I protein M gi|217073|dbj|BAA02130.1| LivE protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16422122|gb|AAL22422.1| high-affinity branched-chain amino acid transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194402607|gb|ACF62829.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197213071|gb|ACH50468.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242197|gb|EDY24817.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205330761|gb|EDZ17525.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261248715|emb|CBG26553.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995791|gb|ACY90676.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160102|emb|CBW19622.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914586|dbj|BAJ38560.1| leucine/isoleucine/valine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226613|gb|EFX51663.1| Branched-chain amino acid transport system permease protein LivM [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323131921|gb|ADX19351.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990413|gb|AEF09396.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 425 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLMALLVIAVAWPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRSTREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|291450776|ref|ZP_06590166.1| branched chain amino acid transport permease [Streptomyces albus J1074] gi|291353725|gb|EFE80627.1| branched chain amino acid transport permease [Streptomyces albus J1074] Length = 617 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 89/350 (25%), Positives = 141/350 (40%), Gaps = 34/350 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V + T++ S+G ILI+ A GL+IVVG GLL L V +G Sbjct: 268 VTVTAAFVSAFAFPFTQTSDAYTSVGTNILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 327 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ + W + + A+ S G+I+G P+L+ GDYLAI TL E Sbjct: 328 AYTAALVSGSPNSPFDVHVPFWAAVLLGALASLIFGVIIGAPTLRLHGDYLAIVTLGFGE 387 Query: 132 IFQNILIKWK-----PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 IF+ + ITNG GI L G Y + Sbjct: 388 IFRIGMQNLDGTSGPDITNGPNGIPNIPDLEMFGFNFGESHTVLGVELGRFSN---YYLL 444 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + + + ++ I AW IR+++ A ++ KL AFA+ + G+AG Sbjct: 445 MLLVTIVVVLVFRRSDQSRIGRAWVAIREDETAARAMGINAFRLKLLAFALGATLAGLAG 504 Query: 247 AFFAASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 A ++P +KF E++ +++ VILGGM ++S A+L + M Sbjct: 505 TVQAHVTYTVTPAQYKFVESMPPNSAFLLAAVILGGMGTVSGPLIGAALLYLIPAKLQFM 564 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 Y L IAL L++ R L+ R + Sbjct: 565 ADY---------------QLLLFGIALVLLMRFRPEGLVADRRKQLEFKE 599 >gi|161505894|ref|YP_001573006.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867241|gb|ABX23864.1| hypothetical protein SARI_04073 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 425 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLIALLIIAVAWPFMVSRGSVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRSAREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|170737627|ref|YP_001778887.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|169819815|gb|ACA94397.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 423 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +++ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 VIIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P++A+ + G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALL 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|157149039|ref|YP_001456358.1| leucine/isoleucine/valine transporter permease subunit [Citrobacter koseri ATCC BAA-895] gi|157086244|gb|ABV15922.1| hypothetical protein CKO_04878 [Citrobacter koseri ATCC BAA-895] Length = 425 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 102/341 (29%), Positives = 162/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLIALLVIAVVWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + F G + FF I++Y V L Sbjct: 211 NNTEVTGGPNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIWLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + S +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVFSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|167584632|ref|ZP_02377020.1| inner-membrane translocator [Burkholderia ubonensis Bu] Length = 423 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 101/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V+ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 AIVWALLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL+ W +P++A+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLTFWECLPLAAIASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSLTGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLLALL 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|332701494|ref|ZP_08421582.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332551643|gb|EGJ48687.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 407 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 96/326 (29%), Positives = 158/326 (48%), Gaps = 18/326 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L + +Y + + +L+YV GL++VVG GLL L + Y +GA Sbjct: 91 VWILLALAVALAYPQFTGRYAQDVAVSVLVYVCLGLGLNVVVGLAGLLDLGYIAFYGVGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YG+ WL +P++AM++ G I+G P+L+ RGDYLAI TL EI + IL Sbjct: 151 YTYALLSVHYGVPFWLCLPIAAMLASLAGCIIGYPTLRMRGDYLAIVTLGFGEIIRIILN 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +TNG GI + + + F + ++YYV+L + + + Sbjct: 211 NWMELTNGPNGILGIEAPSMIVPDFEDGL---GFEFISLRKLQYLYYVVLFLAVFTIVAV 267 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + I AW IR+++ A + KL A+A+ + F G+AGAFFAA +SP Sbjct: 268 HRLNFSRIGRAWEAIREDETAAELMGVNTFLLKLLAYAMGAVFGGLAGAFFAARMRFVSP 327 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F F E+ +V+++V+LGG+ S+ + L+ + E+ G Y Sbjct: 328 ESFTFLESAMVLAMVVLGGLGSIPGVILGALALVALPEVFRGFELY-------------- 373 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRT 344 A+ L++L+R L + Sbjct: 374 -RMLAFGGAMTLMMLVRPAGLWPAKR 398 >gi|239909193|ref|YP_002955935.1| branched-chain amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239799060|dbj|BAH78049.1| branched-chain amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 409 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 87/323 (26%), Positives = 153/323 (47%), Gaps = 17/323 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ P+++F + +Y + I +L+Y+ GL++VVG GLL L + Y +GA Sbjct: 92 MLLAPVIVFALAYPMLTNRYAQDVAINVLVYICLGLGLNVVVGLCGLLDLGYIAFYGVGA 151 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L Y + W+ +P+ A+ + G +G P+L+ RGDYLAI TL EI + ++ Sbjct: 152 YTYALLSVHYSVPFWVCLPICAIFAAVAGCFIGYPTLRMRGDYLAIVTLGFGEIVRIVIN 211 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI F F + ++YY++L + + + Sbjct: 212 NWMALTGGPNGILGIKSPGIYIPHFVDGS--FSFEYLLLRKLEYLYYIILALAAFTIVAV 269 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + I A+ IR+++ A + KL A+A+ + F G+AGAFFAA +SP Sbjct: 270 HRINFSRIGRAFEAIREDETAAELMGVDTFRFKLLAYALGAVFGGLAGAFFAARMRFVSP 329 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F F E+ +V+++V+LGGM S+ + L+ + E Y Sbjct: 330 ESFTFIESAMVLAMVVLGGMGSIPGVILGALALVALPEAFREFELY-------------- 375 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 A+ +++L+R L Sbjct: 376 -RMLAFGGAMAVMMLVRPAGLWP 397 >gi|170767035|ref|ZP_02901488.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia albertii TW07627] gi|170124473|gb|EDS93404.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia albertii TW07627] Length = 425 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + S +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVFSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|167835750|ref|ZP_02462633.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia thailandensis MSMB43] Length = 389 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 17/343 (4%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + ++ + Y + ++YVM A GL++VVG GLL L + YA Sbjct: 25 IGILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAFYA 84 Query: 76 IGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 +GAY+ +L S + + +L++P++ ++ G+++G P+L+ RG Sbjct: 85 VGAYTAALLSSPHLTSHFDWIAQMVPGGLHVPFFLIVPIAMALAAIFGILLGAPTLRLRG 144 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI + + N G + + +L + + Sbjct: 145 DYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITGIDPVQVAGFNLSQTHEIFGFSLPS 204 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ + Sbjct: 205 VYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAMGA 264 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +F G++GA F A + +SP+ F F E+++V++ V+LGGM + + +L E Sbjct: 265 SFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEFLR 324 Query: 300 GMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 + L D + L +A+ +++L RS L Sbjct: 325 STMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWP 367 >gi|53718563|ref|YP_107549.1| putative transport system permease [Burkholderia pseudomallei K96243] gi|53725942|ref|YP_103561.1| branched-chain amino acid ABC transporter permease [Burkholderia mallei ATCC 23344] gi|76811078|ref|YP_332556.1| branched-chain amino acid ABC transporter permease [Burkholderia pseudomallei 1710b] gi|121599720|ref|YP_992281.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia mallei SAVP1] gi|124386025|ref|YP_001026874.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia mallei NCTC 10229] gi|126440477|ref|YP_001058035.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia pseudomallei 668] gi|126454057|ref|YP_001065271.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia pseudomallei 1106a] gi|134281091|ref|ZP_01767800.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 305] gi|167000818|ref|ZP_02266623.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei PRL-20] gi|167718474|ref|ZP_02401710.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei DM98] gi|167737524|ref|ZP_02410298.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 14] gi|167814643|ref|ZP_02446323.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 91] gi|167823111|ref|ZP_02454582.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 9] gi|167844674|ref|ZP_02470182.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei B7210] gi|167893203|ref|ZP_02480605.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 7894] gi|167901656|ref|ZP_02488861.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167909906|ref|ZP_02496997.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 112] gi|167917928|ref|ZP_02505019.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei BCC215] gi|217419827|ref|ZP_03451333.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 576] gi|226194387|ref|ZP_03789985.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237811186|ref|YP_002895637.1| ABC transporter, hydrophobic amino acid uptake transporter [Burkholderia pseudomallei MSHR346] gi|238560967|ref|ZP_00442582.2| HmgF [Burkholderia mallei GB8 horse 4] gi|242314753|ref|ZP_04813769.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1106b] gi|254175642|ref|ZP_04882302.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei ATCC 10399] gi|254181479|ref|ZP_04888076.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1655] gi|254190867|ref|ZP_04897374.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254196605|ref|ZP_04903029.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei S13] gi|254202249|ref|ZP_04908612.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei FMH] gi|254207582|ref|ZP_04913932.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei JHU] gi|254260206|ref|ZP_04951260.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1710a] gi|52208977|emb|CAH34916.1| putative transport system permease protein [Burkholderia pseudomallei K96243] gi|52429365|gb|AAU49958.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|76580531|gb|ABA50006.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|121228530|gb|ABM51048.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei SAVP1] gi|124294045|gb|ABN03314.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei NCTC 10229] gi|126219970|gb|ABN83476.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 668] gi|126227699|gb|ABN91239.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1106a] gi|134247397|gb|EBA47482.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 305] gi|147746496|gb|EDK53573.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei FMH] gi|147751476|gb|EDK58543.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei JHU] gi|157938542|gb|EDO94212.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|160696686|gb|EDP86656.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei ATCC 10399] gi|169653348|gb|EDS86041.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei S13] gi|184212017|gb|EDU09060.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1655] gi|217397131|gb|EEC37147.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 576] gi|225933472|gb|EEH29461.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237506058|gb|ACQ98376.1| ABC transporter, hydrophobic amino acid uptake transporter [Burkholderia pseudomallei MSHR346] gi|238525279|gb|EEP88707.1| HmgF [Burkholderia mallei GB8 horse 4] gi|242137992|gb|EES24394.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1106b] gi|243063248|gb|EES45434.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei PRL-20] gi|254218895|gb|EET08279.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1710a] Length = 389 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 83/343 (24%), Positives = 151/343 (44%), Gaps = 17/343 (4%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + ++ + Y + ++YVM A GL++VVG GLL L + YA Sbjct: 25 VGILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAFYA 84 Query: 76 IGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 +GAY+ +L S + + L++P++ ++ G+++G P+L+ RG Sbjct: 85 VGAYTAALLSSPHLTSHFDWIAQMVPGGLHVPFLLIVPIAMALAAIFGILLGAPTLRLRG 144 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI + + N G + + +L + + Sbjct: 145 DYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITGIDPVQVAGFNLSQTHEIFGFSLPS 204 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ + Sbjct: 205 VYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAMGA 264 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +F G++GA F A + +SP+ F F E+++V++ V+LGGM + + +L E Sbjct: 265 SFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEFLR 324 Query: 300 GMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 + L D + L +A+ +++L RS L Sbjct: 325 STMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWP 367 >gi|163856636|ref|YP_001630934.1| leucine/isoleucine/valine transporter permease subunit [Bordetella petrii DSM 12804] gi|163260364|emb|CAP42666.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella petrii] Length = 411 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 98/341 (28%), Positives = 158/341 (46%), Gaps = 24/341 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L+L + S + + +LIYVM GL+IVVG GLL L V YA+GAY Sbjct: 86 IIALLILAAVIWPFFSGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 145 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L G W +P + +S G ++G P L+ RGDYLAI TL EI + +LI Sbjct: 146 TYALLYHWAGWGFWEALPFAGAMSALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLIN 205 Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 IT G GI + G + R+ + ++Y + L + Sbjct: 206 LNFITGGPDGISGIPKPTVFGMEMARRSSVEGARTFHEIMGWTFDNQHMVNYLYLMALAL 265 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 ++ + L R + AW +R+++ A SL KLSAF + + F G GAFFA Sbjct: 266 ALVTLFVSTRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFFA 325 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ Y Sbjct: 326 ARQGMVNPESFTFIESALILAIVVLGGMGSQVGVILAAILLTVLPEVAREFAEY------ 379 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL ++ P L + Sbjct: 380 ---------RMLIFGLVMVLMMMWRPQGLLPMKRPHVELAK 411 >gi|218892965|ref|YP_002441834.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas aeruginosa LESB58] gi|218773193|emb|CAW29005.1| branched-chain amino acid transport protein BraE [Pseudomonas aeruginosa LESB58] Length = 417 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 24/339 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + L++ F+ + + + ILIYVM GL+IVVG GLL L V YA+GAY Sbjct: 94 AILALVVVAFVWPFFASRGAVDIATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L G W +P++ M++ G ++G P L+ RGDYLAI TL EI + +L Sbjct: 154 TYALLAEYAGFGFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 IT G GI + G T ++ FF + I +Y V L + Sbjct: 214 MTEITGGPNGIGSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVVALLLV 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +I L R I AW +R+++ A +L KLSAF + ++F G AG+FFAA Sbjct: 274 LLALFVINRLMRMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGSFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ ++++IV+LGGM S + A +++ + E+ Sbjct: 334 RQGLVTPESFTFIESAMILAIVVLGGMGSQLGVILAAVVMVLLQEM-------------- 379 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 FN + + + ++++ R LL ++ P L+ Sbjct: 380 --RGFNEYRMLIFGLTMIVMMIWRPQGLLPMQRPHLELK 416 >gi|134095848|ref|YP_001100923.1| high-affinity branched-chain amino acid ABC transporter ATP-binding protein [Herminiimonas arsenicoxydans] gi|133739751|emb|CAL62802.1| Putative high-affinity branched-chain amino acid transport ATP-binding protein BraF [Herminiimonas arsenicoxydans] Length = 608 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 30/313 (9%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 L + +Y + + +LIY + A GL+I+ G GL+SL +AIGAY+ +L +++G Sbjct: 25 LPQMVANEYELRIWMLLLIYALVALGLNILTGLTGLVSLGQAGLFAIGAYTSAVLSTKFG 84 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + I + ++S A G+++ P+++ RG YL + T+ I +N+ I+W +T G G Sbjct: 85 FGLGTCIVAAMILSAAFGVLLSYPTVRVRGVYLTVITIAFGIIVENVAIEWSSLTGGPNG 144 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 I G + +YVL + L+ + L ++ A Sbjct: 145 ISSIPTPTMFGLPLEDTK---------------FFYVLAILFLLAFLLHYNLIKSRFGRA 189 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + ++ A ++ I ++ +F +++AF G AGA +A ++PD F+F +++ Sbjct: 190 MRAVSQSETAARTVGINPIVMRMMSFVIAAAFAGAAGATYAFLNQYVNPDTFRFDDSVRF 249 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +VILGG ++ A IL + E + L Sbjct: 250 LLMVILGGSGTVIGPALGATILTFIPEYLQSFGE---------------WQRFAYGVLLA 294 Query: 330 LVILMRSHSLLRL 342 LV+ ++ Sbjct: 295 LVMFGMPMGIVGT 307 >gi|224825879|ref|ZP_03698983.1| inner-membrane translocator [Lutiella nitroferrum 2002] gi|224602103|gb|EEG08282.1| inner-membrane translocator [Lutiella nitroferrum 2002] Length = 361 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 85/353 (24%), Positives = 156/353 (44%), Gaps = 4/353 (1%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M++ +L+ K+ L L + F+ + L+YVM A GL+IVV Sbjct: 3 MALEMNKLDTNKKVGLFLVSAIVLAVLPFVVGGLLGNSWLRIIDFALLYVMLALGLNIVV 62 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 G GLL L + YA+GAY++ +LGS + L ++ IP+ A+++ G+++G P L+ Sbjct: 63 GFAGLLDLGFIAFYAVGAYTFALLGSPHFDIHLPFYITIPLGALVAAFFGILLGTPVLRL 122 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 +GDYLAI TL EI + + N G + + + S + Sbjct: 123 KGDYLAIVTLGFGEIVRIFMNNLNAPINITNGPQGINLIDPVKIGGLSFGKPLEIAGHSF 182 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY L + L + L+ + I AW +R++ A ++ I KL AF++ Sbjct: 183 NSVYLYYYFFLALTVLVVIMAWRLQHSRIGRAWVAMREDSIAAAAMGLNIRNIKLLAFSL 242 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+AG FA+ + ISP+ F E+++++++++LGGM + + +L E+ Sbjct: 243 GALSGGVAGGLFASFQGFISPESFGLLESVMILAMIVLGGMGHIPGVILGAVVLTVAPEV 302 Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + + +AL +++L+R + + Sbjct: 303 LRDVIGPLQMHTFGRMLIDPENARMLIFGLALVIMMLLRPEGMWPSKRRKAEF 355 >gi|221068780|ref|ZP_03544885.1| inner-membrane translocator [Comamonas testosteroni KF-1] gi|220713803|gb|EED69171.1| inner-membrane translocator [Comamonas testosteroni KF-1] Length = 359 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 93/358 (25%), Positives = 167/358 (46%), Gaps = 18/358 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K +K L + LL+ + ++ + L+YVM A GL+IVVG GLL L Sbjct: 2 KNNKTLHWILGGIGLLVLPLILQYFGNAWV-RIADLALLYVMLALGLNIVVGYAGLLDLG 60 Query: 70 CVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLP 113 V YA+GAY + ++ S + SIWL+IP+ +++ G+++GLP Sbjct: 61 YVAFYAVGAYMFALMASPHLAETFEGFVAMFPNGLHTSIWLVIPLGMLLAACTGVLLGLP 120 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L+ RGDYLAI TL EI + L N G ++ + L + Sbjct: 121 VLRLRGDYLAIVTLGFGEIIRIFLNNLDQPVNITNGPKGIGQIDSVKIFGFDLAKRHEIF 180 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + YY+ L + + I L+ + I AW IR+++ A ++ + KL Sbjct: 181 GYDISSVTLYYYLFLVLVLATIVICYRLQDSRIGRAWMAIREDEIAAKAMGINVRNMKLL 240 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF + ++F G+AG+ FAA + +SP+ F E+++++++V+LGG+ + + +L Sbjct: 241 AFGMGASFGGVAGSMFAAFQGFVSPESFSLMESVMIVAMVVLGGLGHIPGVILGAVLLSA 300 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + E+ + + ++ L+ +A+ +++LMR L + L+R Sbjct: 301 LPEVLRYVAGP-LQQMTDGRLDASILRQLLIALAMIVIMLMRPRGLWPTPEHAKSLDR 357 >gi|126450210|ref|YP_001079839.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia mallei NCTC 10247] gi|126243080|gb|ABO06173.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei NCTC 10247] Length = 389 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 83/343 (24%), Positives = 150/343 (43%), Gaps = 17/343 (4%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + ++ + Y + ++YVM A GL++VVG GLL L + YA Sbjct: 25 VGILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAFYA 84 Query: 76 IGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 +GAY+ +L S + + L++P++ ++ G+++G P+L+ RG Sbjct: 85 VGAYTAALLSSPHLTSHFDWIAQMVPGGLHVPFLLIVPIAMALAAIFGILLGAPTLRLRG 144 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI + + N G + + +L + + Sbjct: 145 DYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITGIDPVQVAGFNLSQTHEIFGFSLPS 204 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 YY+ + L L+ + I AW IR+++ A ++ KL AFA+ + Sbjct: 205 VYMYYYLFVLCALLVIWACTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAMGA 264 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +F G++GA F A + +SP+ F F E+++V++ V+LGGM + + +L E Sbjct: 265 SFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEFLR 324 Query: 300 GMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 + L D + L +A+ +++L RS L Sbjct: 325 STMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWP 367 >gi|83718822|ref|YP_441342.1| branched-chain amino acid ABC transporter permease [Burkholderia thailandensis E264] gi|167582956|ref|ZP_02375830.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|167618192|ref|ZP_02386823.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257139984|ref|ZP_05588246.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83652647|gb|ABC36710.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 389 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 83/341 (24%), Positives = 153/341 (44%), Gaps = 17/341 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + ++ + Y + ++YVM A GL++VVG GLL L + YA+G Sbjct: 27 ILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAFYAVG 86 Query: 78 AYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 AY+ +L S + + +L++P++ ++ G+++G P+L+ RGDY Sbjct: 87 AYTAALLSSPHLTSNFDWIAHAFPAGLHVPFFLIVPIAMALAAVFGILLGAPTLRLRGDY 146 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI + + N G + + +L + + + Sbjct: 147 LAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITGIDPVTIAGFNLSQTHQIFGFSLPSVY 206 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ ++F Sbjct: 207 MYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAMGASF 266 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G++GA F A + +SP+ F F E+++V++ V+LGGM + + +L E Sbjct: 267 GGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEFLRST 326 Query: 302 NFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 + L D + L +A+ +++L RS L Sbjct: 327 MSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWP 367 >gi|221200421|ref|ZP_03573463.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221206101|ref|ZP_03579115.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221174113|gb|EEE06546.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221179762|gb|EEE12167.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 423 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+++ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 AIIWVLLAVGLVWPFVGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL+ W +P++A+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLTFWECLPIAAIASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSLTGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLLALL 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|325499005|gb|EGC96864.1| leucine/isoleucine/valine transporter permease subunit [Escherichia fergusonii ECD227] Length = 425 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|73542003|ref|YP_296523.1| leucine/isoleucine/valine transporter permease subunit [Ralstonia eutropha JMP134] gi|72119416|gb|AAZ61679.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 425 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 101/342 (29%), Positives = 156/342 (45%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A V+ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 99 AAVWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 158 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL W +P++A +S G ++G P L+ RGDYLAI TL EI + + Sbjct: 159 YTYAMLNQYFGLGFWECLPIAAAMSATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAR 218 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 T G GI + G + R+ IF+Y + L Sbjct: 219 NLTEYTGGPDGISGIPKPTVFGFEMARSATVEGARTFHELIGLDYKGEHMVIFLYLLALL 278 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +R+++ A SL KLSAF + +AF G+ GAFF Sbjct: 279 LVGFTLFVTSRLIRMPMGRAWEALREDEIACRSLGMNPTRIKLSAFTLGAAFAGIGGAFF 338 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ +V+++V+LGGM S + A +L + E+ G Y Sbjct: 339 AARQGLVNPESFTFIESALVLAVVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 393 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L R Sbjct: 394 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPR 425 >gi|319780972|ref|YP_004140448.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166860|gb|ADV10398.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 531 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 129/343 (37%), Positives = 201/343 (58%), Gaps = 8/343 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + ++A++ + G S K++D+ GIQILIYVM AWGL+IVVG GLL L V Y Sbjct: 177 ILVVAILSLMSWSFVGGLQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFY 236 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAY+Y +LG++YGLS W+L+P + ++ G+++G P L+ RGDYLAI TL EI + Sbjct: 237 AVGAYAYALLGTQYGLSFWILLPAAGAMAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIR 296 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR------FPSSFVIYEIFMYYVLL 188 +LI W+ +TNG AGI ++ F G ++ +S Y+IF+YY++L Sbjct: 297 LVLINWREVTNGSAGISGIPKVTFFGLMTFNVSDPNYVAKVLHLATSSAYYKIFLYYLIL 356 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + L+A + + LRR + AW +R+++ A SL KL+AFA + F G AGAF Sbjct: 357 ALALLTAFVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAGAF 416 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 FAA + +SP+ F F E+ I+++IV+LGGM SL IA A ++IG E ++ + Sbjct: 417 FAARQGFVSPESFVFLESAIILAIVVLGGMGSLVGIAVAAMVMIGGTEALRELD--FLKQ 474 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + D + + L +A+ +V+L + + R P+ FL+ Sbjct: 475 VFGPDFTPELYRMLLFGMAMVIVMLWKPRGFVGSREPTAFLKE 517 >gi|330469207|ref|YP_004406950.1| inner-membrane translocator [Verrucosispora maris AB-18-032] gi|328812178|gb|AEB46350.1| inner-membrane translocator [Verrucosispora maris AB-18-032] Length = 369 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 81/353 (22%), Positives = 148/353 (41%), Gaps = 26/353 (7%) Query: 7 RLNKYDKILCLLAVVYPL----LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62 R ++ I ++ Y L + + I IYV+ A GL+IVVG Sbjct: 24 RWMRWAVIAAVIVFFYALPNREFYQWLGPIPTTGSNFGQVLFTISIYVLLAVGLNIVVGF 83 Query: 63 LGLLSLNCVIAYAIGAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 GLL L +A+GAY+ +L S L +PV+ +++ G+++G P+L+ Sbjct: 84 AGLLDLGYFGFFAVGAYTVAVLTSPSSDLKTLWPWLLALPVALVLTMISGVMLGTPTLRL 143 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL +E+ + + + + + P V Sbjct: 144 RGDYLAIVTLGFAEMIRVAATSSEFLKGQRGFNQIPHPP---------GSYSDGKPIFGV 194 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + Y+++L + L + L R+ + AW +IR+++ A + KL AFA Sbjct: 195 LDPRPYYWLVLTLIILVVIGVRNLNRSRVGRAWISIREDEDAAQLMGVPTFKFKLWAFAS 254 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+AGA FA ++ +S + +II+++ VILGG ++ ++ ++E Sbjct: 255 GAFIGGLAGALFAGKQNFVSSQNLELLNSIIILAAVILGGSGNIVGAIVGGGLVAYMIER 314 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 G+ F F + L ++++ R L+ R + + Sbjct: 315 FRGIEF--------FGVELYEYRFMFFGLVLVVMMIFRPQGLIPNRRRAAEFK 359 >gi|118470269|ref|YP_887560.1| branched-chain amino acid ABC transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118171556|gb|ABK72452.1| branched-chain amino acid ABC transporter, permease protein [Mycobacterium smegmatis str. MC2 155] Length = 404 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 78/356 (21%), Positives = 144/356 (40%), Gaps = 23/356 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R+ K+ + ++ L LF Q + + A GL++VVG GLL Sbjct: 37 RVAKWAVGVIGFGLLALLPLFTPGFLNTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGLL 96 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLS--------------IWLLIPVSAMISGACGMIMGL 112 L V YA+GAY+ +L S +P++ I+ G+I+G Sbjct: 97 DLGYVGFYAVGAYTVALLTSPSSPWNIVGVDKFLSSDWAWLACVPLAMAITAIAGLILGT 156 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT-TVRSLIRFFR 171 P+L+ RGDYLAI TL EI + + ITNG G+ + + + + Sbjct: 157 PTLRLRGDYLAIVTLGFGEIIRLMADNLSDITNGARGLNQVAYPRLGESEKLPNGVFSSG 216 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + Y + +++ L + ++ L R+ + AW IR+++ A + K Sbjct: 217 NSTGVANYGTWWFWLGLALIVGILLLVGNLERSRVGRAWIAIREDEDAAEVMGVNAFKFK 276 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L AF + +A G++GA +A ++P F +++ + V+LGG + + ++ Sbjct: 277 LWAFTIGAAIGGLSGALYAGQVQYVAPQTFNIINSMLFLCAVVLGGQGNKLGVIFGAFVI 336 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + G+ F + +AL ++++ R L R Sbjct: 337 VYLPNRLLGVEF--------LGINLGDLKYLFFGLALVVLMIFRPQGLFPARQHLL 384 >gi|120603438|ref|YP_967838.1| inner-membrane translocator [Desulfovibrio vulgaris DP4] gi|120563667|gb|ABM29411.1| L-isoleucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-leucine ABC transporter membrane protein [Desulfovibrio vulgaris DP4] Length = 407 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 26/326 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + +L+ + Y ++ I L+YVM GL+IVVG G L L V YA+GAY Sbjct: 92 ALLAVLVVFAVLPMLVSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYAVGAY 151 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L + +GL W ++P+ ++ G+++G P L+ +GDYLAI TL EI + +L Sbjct: 152 AYALLNADFGLGFWTVLPIGGALAAVFGILLGFPVLRLKGDYLAIVTLGFGEIVRLVLEN 211 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T G +GI R F S ++YY++L + + Sbjct: 212 WGSVTRGPSGISKIARPG-----------LFGMELSVSEATTYIYYLILAAVIFTIFAVG 260 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L+ + I AW+ +R+++ A ++ + KL+AFA+ + + G AG FAA I+P Sbjct: 261 RLKDSRIGRAWQALREDEIACEAMGIDLTTTKLTAFALGACWAGFAGVIFAAKTTFINPA 320 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F F E+ +++++V+LGGM S + +LI + E + Y Sbjct: 321 SFTFLESAMILAMVVLGGMGSTLGVVLGALVLILLPEYLRAFSEY--------------- 365 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTP 345 + A+ L+++ R L+ R+ Sbjct: 366 RMLIFGAAMVLMMVFRPQGLVSCRSR 391 >gi|107025707|ref|YP_623218.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia cenocepacia AU 1054] gi|116693111|ref|YP_838644.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia cenocepacia HI2424] gi|254250055|ref|ZP_04943375.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|105895081|gb|ABF78245.1| L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein / L-valine ABC transporter membrane protein [Burkholderia cenocepacia AU 1054] gi|116651111|gb|ABK11751.1| L-leucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein [Burkholderia cenocepacia HI2424] gi|124876556|gb|EAY66546.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia cenocepacia PC184] Length = 423 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +++ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 VIIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P++A+ + G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALL 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|33592399|ref|NP_880043.1| leucine/isoleucine/valine transporter permease subunit [Bordetella pertussis Tohama I] gi|33572044|emb|CAE41571.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella pertussis Tohama I] gi|332381815|gb|AEE66662.1| leucine/isoleucine/valine transporter permease subunit [Bordetella pertussis CS] Length = 412 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 100/341 (29%), Positives = 159/341 (46%), Gaps = 24/341 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V L+ + S + + +LIYVM GL+IVVG GLL L V YA+GAY Sbjct: 87 LVVLLIAVSVIWPFFSGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 146 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L G S W +P S ++ G ++G P L+ RGDYLAI TL EI + +LI Sbjct: 147 TYALLYHWGGWSFWEALPFSGAVAALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLIN 206 Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 +T G GI + LG + ++ + I++Y + L + Sbjct: 207 LNMLTGGPDGISGLPKPSVLGMEMARRASTEGGQTFHEIMGWTFQNQHMVIYLYLMALAL 266 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + L R + AW +R+++ A SL KLSAF + + F G GAFFA Sbjct: 267 ALATLFVSTRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFFA 326 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + ++P+ F F E+ ++++IV+LGGM S + A +L + EL Y Sbjct: 327 ARQGMVNPESFTFIESALILAIVVLGGMGSQIGVILAAILLTVLPELAREFAEY------ 380 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL ++ P L + Sbjct: 381 ---------RMLMFGLVMVLMMMWRPQGLLPMKRPHVELRK 412 >gi|194431036|ref|ZP_03063329.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Shigella dysenteriae 1012] gi|194420491|gb|EDX36567.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Shigella dysenteriae 1012] gi|332086015|gb|EGI91179.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella dysenteriae 155-74] Length = 425 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAEPAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|258653227|ref|YP_003202383.1| inner-membrane translocator [Nakamurella multipartita DSM 44233] gi|258556452|gb|ACV79394.1| inner-membrane translocator [Nakamurella multipartita DSM 44233] Length = 408 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 80/360 (22%), Positives = 150/360 (41%), Gaps = 17/360 (4%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R+ ++ + + ++ L L T ++ Q +Y + A GL++VVG GLL Sbjct: 28 RVTQWAFGVPFILLIAVLPLLNIPLLTTQGTNFGAVMAQFGMYALIAIGLNVVVGQAGLL 87 Query: 67 SLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGL 112 L V YA+GAY+ +L S + +P++ MI+ G+I+G Sbjct: 88 DLGYVGFYAVGAYTVALLTSPASPWNQTGPGGWLSTDWAWLACLPIAIMITAISGLILGS 147 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF-R 171 P+L+ RGDYLAI TL EI + + IT G G+ F + L F Sbjct: 148 PTLRLRGDYLAIVTLGFGEIVRLLADNLIEITGGGRGLAQVAYPRFGTSESNPLGVFSAG 207 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 S + ++ +++ + + + + L R+ + AW IR+++ A + K Sbjct: 208 NVSGTLNSGVWWFWLSIVLIVIVLIFVGNLERSRVGRAWVAIREDEDAAEIMGVPTFKFK 267 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L AF + + GM+GA +A + P F +++ + V+LGG + + I+ Sbjct: 268 LWAFVIGAGIGGMSGALYAGQVQFVVPTNFNVINSVLFLCAVVLGGQGNKLGVILGAFII 327 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + + + +AL ++++ R L+ +R R Sbjct: 328 VYLPNFF--LGRDEILGIPIDGDAIAQYKYLFFGLALMVLMIFRPQGLIPVRQKLLTYGR 385 >gi|206564084|ref|YP_002234847.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia cenocepacia J2315] gi|198040124|emb|CAR56106.1| putative amino acid transport system permease component of ABC transporter protein [Burkholderia cenocepacia J2315] Length = 423 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +++ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 VIIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P++A+ + G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALL 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|167561874|ref|ZP_02354790.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia oklahomensis EO147] gi|167569095|ref|ZP_02361969.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia oklahomensis C6786] Length = 388 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 84/345 (24%), Positives = 151/345 (43%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + ++ L Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VTVGVLTAALVVAAPLLIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + +L++P++ + G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTSHFDWIAQLVPGGLHVPFFLIVPIAMAFAAFFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITGIDPVTVAGFNLSQTHEIFGFSL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F A + +SP+ F F E+++V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEF 322 Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L D + L +A+ L++L RS + Sbjct: 323 LRSTMSPLQHMLFGHDVIDTEVIRQGLYGLAMVLIMLYRSEGIWP 367 >gi|78061503|ref|YP_371411.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia sp. 383] gi|77969388|gb|ABB10767.1| L-leucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein [Burkholderia sp. 383] Length = 423 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 99/342 (28%), Positives = 159/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +++ +L F+ + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 VIIWVMLAIGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GLS W +P++A+ + G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALV 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|161520174|ref|YP_001583601.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia multivorans ATCC 17616] gi|189353647|ref|YP_001949274.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia multivorans ATCC 17616] gi|160344224|gb|ABX17309.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189337669|dbj|BAG46738.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 423 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+++ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 AIIWVLLAVGLVWPFVGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL+ W +P++A+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLTFWECLPIAAIASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSLTGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLLALL 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|167035910|ref|YP_001671141.1| inner-membrane translocator [Pseudomonas putida GB-1] gi|166862398|gb|ABZ00806.1| inner-membrane translocator [Pseudomonas putida GB-1] Length = 433 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 106 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ +F R + FF F + + +F+Y VL + Sbjct: 226 WLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNANLKFVFIYAVLFLVVL 285 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R + AW +R+++ A S+ + KLSAF + ++ G+AG FFA Sbjct: 286 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 345 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + L+++ R L+R Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419 >gi|311277621|ref|YP_003939852.1| inner-membrane translocator [Enterobacter cloacae SCF1] gi|308746816|gb|ADO46568.1| inner-membrane translocator [Enterobacter cloacae SCF1] Length = 425 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 99/341 (29%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLIALLVIAVAWPFMVSRGAVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI---------FMYYVLLG 189 +T G GI + G R + + + + F+Y V L Sbjct: 211 NNTEVTGGPNGISQIPKPTLFGLEFSRTAREGGWDTFSNFFNVKYDPNDRVVFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVATLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRVQLKLK 416 >gi|221209454|ref|ZP_03582435.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221170142|gb|EEE02608.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD1] Length = 423 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+++ LL + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 97 AIIWVLLAVGLVWPFVGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL+ W +P++A+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 157 YTYAMLNQYFGLTFWECLPIAAIASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + + S IF+Y + L Sbjct: 217 NLTSLTGGPDGISGIPKPTVFGFEMARTASVEGAKTFHELIGLEYSGEHMVIFLYLLALL 276 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFF Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|187478386|ref|YP_786410.1| leucine/isoleucine/valine transporter permease subunit [Bordetella avium 197N] gi|115422972|emb|CAJ49502.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Bordetella avium 197N] Length = 413 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 103/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + LLL + + + + +LIYVM GL+IVVG GLL L V YA+GAY Sbjct: 88 LFMLLLLAALIWPFFAGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 147 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L G W +P+S ++ G I+G P L+ RGDYLAI TL EI + +LI Sbjct: 148 TYALLYHWAGWGFWEALPMSGAMAAVFGFILGFPVLRLRGDYLAIVTLGFGEIIRLLLIN 207 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLGM 190 +T G GI + F G + + FF F I++Y + L + Sbjct: 208 LSSVTGGPDGISGIPKPTFFGLELTRRASQEGTQTFHEFFGFTFQNQHMVIYLYLMALAL 267 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 ++ + L R + AW +R+++ A SL KLSAF + + F G GAFFA Sbjct: 268 ALITLFVSTRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFFA 327 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ Y Sbjct: 328 ARQGMVNPESFTFIESALILAIVVLGGMGSQIGVILAAILLTVLPEVAREFAEY------ 381 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + L+++ R LL ++ P L + Sbjct: 382 ---------RMLLFGLVMVLMMMWRPQGLLPMKRPHVELGK 413 >gi|46578964|ref|YP_009772.1| high-affinity branched-chain amino acid ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|46448377|gb|AAS95031.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Desulfovibrio vulgaris str. Hildenborough] gi|311232819|gb|ADP85673.1| inner-membrane translocator [Desulfovibrio vulgaris RCH1] Length = 407 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 26/326 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + +L+ + Y ++ I L+YVM GL+IVVG G L L V YA+GAY Sbjct: 92 ALLAVLVVFAVLPMLVSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYAVGAY 151 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L + +GL W ++P+ ++ G+++G P L+ +GDYLAI TL EI + +L Sbjct: 152 AYALLNADFGLGFWTVLPIGGALAAVFGILLGFPVLRLKGDYLAIVTLGFGEIVRLVLEN 211 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T G +GI R F S ++YY++L + + Sbjct: 212 WGSVTRGPSGISKIARPG-----------LFGMELSVSEATTYIYYLILAAVIFTIFAVG 260 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L+ + I AW+ +R+++ A ++ + KL+AFA+ + + G AG FAA I+P Sbjct: 261 RLKDSRIGRAWQALREDEIACEAMGIDLTTTKLTAFALGACWAGFAGVIFAAKTTFINPA 320 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F F E+ +++++V+LGGM S + +LI + E + Y Sbjct: 321 SFTFLESAMILAMVVLGGMGSTLGVVLGALVLILLPEYLRAFSEY--------------- 365 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTP 345 + A+ L+++ R L+ R+ Sbjct: 366 RMLIFGAAMVLMMVFRPQGLVSCRSR 391 >gi|215488731|ref|YP_002331162.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O127:H6 str. E2348/69] gi|312968233|ref|ZP_07782443.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli 2362-75] gi|215266803|emb|CAS11244.1| high-affinity branched-chain amino acid transport; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|312287058|gb|EFR14968.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli 2362-75] Length = 425 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVALSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|256379541|ref|YP_003103201.1| inner-membrane translocator [Actinosynnema mirum DSM 43827] gi|255923844|gb|ACU39355.1| inner-membrane translocator [Actinosynnema mirum DSM 43827] Length = 385 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 82/345 (23%), Positives = 140/345 (40%), Gaps = 18/345 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGI-QILIYVMFAWGLSIVVGSLGLL 66 +Y L + L ++ I + +Y++ A GL+IVVG GLL Sbjct: 33 WQRYLVYLAAIGFALILPAPWIGSFMSPGADWTTVLIYPVGVYILLAVGLNIVVGQAGLL 92 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L V +A+G YS G++YG + W I + ++ G+++G P+L+ RGDYLAI T Sbjct: 93 DLGFVAFFAMGGYSVAYFGTQYGWNYWATIVIGIGLAAVSGVVLGAPTLRLRGDYLAIVT 152 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I G GI + F + YY+ Sbjct: 153 LGFGEIVRITANNTDEI-GGARGITNIPHPPDM------------LGLEFRLDPAPYYYL 199 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 ++ + + L+++ + AW IR+++ A + KL AFA+ + G+AG Sbjct: 200 MVAAIAVVIVFSVRLQKSRVGRAWAAIREDEDAAELMGVPTFKFKLLAFAIGAMIGGLAG 259 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A I P+ F F + +++ V+LGG +L + ++ + E +N+ Sbjct: 260 GLHAGKAVFIEPNTFPFILSATILAAVVLGGSGNLPGVMLGAFVIAWLPERFREVNWLED 319 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + L L L++ +R LL R L Sbjct: 320 L----LGRDPSEYRILLFGGVLVLMMGLRPEGLLPSRRRKAELHE 360 >gi|293412876|ref|ZP_06655544.1| livM [Escherichia coli B354] gi|291468523|gb|EFF11016.1| livM [Escherichia coli B354] Length = 425 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|157162932|ref|YP_001460250.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli HS] gi|170018312|ref|YP_001723266.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli ATCC 8739] gi|188492137|ref|ZP_02999407.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli 53638] gi|254038623|ref|ZP_04872679.1| leucine/isoleucine/valine transporter permease subunit [Escherichia sp. 1_1_43] gi|300917214|ref|ZP_07133895.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 115-1] gi|312972280|ref|ZP_07786454.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli 1827-70] gi|157068612|gb|ABV07867.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli HS] gi|169753240|gb|ACA75939.1| inner-membrane translocator [Escherichia coli ATCC 8739] gi|188487336|gb|EDU62439.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli 53638] gi|226839129|gb|EEH71152.1| leucine/isoleucine/valine transporter permease subunit [Escherichia sp. 1_1_43] gi|300415497|gb|EFJ98807.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 115-1] gi|309703862|emb|CBJ03203.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|310334657|gb|EFQ00862.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli 1827-70] gi|323934558|gb|EGB30958.1| branched-chain amino acid transport system/permease component protein [Escherichia coli E1520] gi|323939326|gb|EGB35537.1| branched-chain amino acid transport system/permease component protein [Escherichia coli E482] gi|332345410|gb|AEE58744.1| high-affinity branched-chain amino acid transport ATP-binding protein LivM [Escherichia coli UMNK88] Length = 425 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|264677026|ref|YP_003276932.1| High-affinity branched-chain amino acidtransporter permease livM [Comamonas testosteroni CNB-2] gi|299532554|ref|ZP_07045944.1| High-affinity branched-chain amino acidtransport system permease protein livM [Comamonas testosteroni S44] gi|262207538|gb|ACY31636.1| High-affinity branched-chain amino acidtransport system permease protein livM [Comamonas testosteroni CNB-2] gi|298719501|gb|EFI60468.1| High-affinity branched-chain amino acidtransport system permease protein livM [Comamonas testosteroni S44] Length = 359 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 92/358 (25%), Positives = 166/358 (46%), Gaps = 18/358 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K +K L + LL+ + ++ + L+YVM A GL+IVVG GLL L Sbjct: 2 KNNKTLHWILGGIGLLVLPLILQYFGNAWV-RIADLALLYVMLALGLNIVVGYAGLLDLG 60 Query: 70 CVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLP 113 V YA+GAY + ++ S + SIWL+IP+ +++ G+++GLP Sbjct: 61 YVAFYAVGAYMFALMASPHLAETFEGFVAMFPNGLHTSIWLVIPLGMLLAACTGVLLGLP 120 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L+ RGDYLAI TL EI + L N G ++ + L + Sbjct: 121 VLRLRGDYLAIVTLGFGEIIRIFLNNLDQPVNITNGPKGIGQIDSVKIFGFDLAKRHEIF 180 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + YY+ L + + I L+ + I AW IR+++ A ++ + KL Sbjct: 181 GYDIASVTLYYYLFLVLVLATIVICYRLQDSRIGRAWMAIREDEIAAKAMGINVRNMKLL 240 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF + ++F G+AG+ F A + +SP+ F E+++++++V+LGG+ + + +L Sbjct: 241 AFGMGASFGGVAGSMFGAFQGFVSPESFSLMESVMIVAMVVLGGLGHIPGVILGAVLLSA 300 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + E+ + + ++ L+ +A+ +++LMR L + L+R Sbjct: 301 LPEVLRYVAGP-LQQMTDGRLDASILRQLLIALAMIVIMLMRPRGLWPTPEHAKSLDR 357 >gi|209517437|ref|ZP_03266278.1| inner-membrane translocator [Burkholderia sp. H160] gi|209502091|gb|EEA02106.1| inner-membrane translocator [Burkholderia sp. H160] Length = 389 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + ++ + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 LIVGVITTIFVIAAPMVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFCGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YAIGAY+ +L S + + IW+++P++ ++ G+++G P+L+ Sbjct: 83 YAIGAYTAALLSSPHLSTQFEWIAHLAPHGLNVPIWIIVPIAMALAAVFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + SL + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGINPVQVGGFSLAQSHSLFGFQF 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PAVYGYYYLFVLCALLVIWTCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA FA+ + +SP+ F F E+++V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFASFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 N + + + L +A+ +++L RS L Sbjct: 323 LRSTMGPLQNMIFGHEIVDTEVIRQLLYGLAMVVIMLYRSEGLWP 367 >gi|330984535|gb|EGH82638.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. lachrymans str. M301315] Length = 437 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R + +F F + + +F+Y VL + Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGIPIHEYFGFDYNPDLKFLFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|191167323|ref|ZP_03029140.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli B7A] gi|218556005|ref|YP_002388918.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli IAI1] gi|218697139|ref|YP_002404806.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli 55989] gi|300815342|ref|ZP_07095567.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 107-1] gi|190902675|gb|EDV62407.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli B7A] gi|218353871|emb|CAV00259.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218362773|emb|CAR00399.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|300532234|gb|EFK53296.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 107-1] gi|323182920|gb|EFZ68321.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli 1357] gi|324116346|gb|EGC10265.1| branched-chain amino acid transport system/permease component protein [Escherichia coli E1167] Length = 425 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|331655036|ref|ZP_08356035.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli M718] gi|331047051|gb|EGI19129.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli M718] Length = 425 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGVMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|301018540|ref|ZP_07182918.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 69-1] gi|300399659|gb|EFJ83197.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 69-1] Length = 425 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|218550718|ref|YP_002384509.1| leucine/isoleucine/valine transporter permease subunit [Escherichia fergusonii ATCC 35469] gi|218358259|emb|CAQ90906.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 425 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|209886583|ref|YP_002290440.1| ABC branched chain amino acid family transporter [Oligotropha carboxidovorans OM5] gi|209874779|gb|ACI94575.1| ABC branched chain amino acid family transporter [Oligotropha carboxidovorans OM5] Length = 599 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 72/311 (23%), Positives = 128/311 (41%), Gaps = 30/311 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 T +Y + + IY + A GL+++VG GL+SL +A+GAY+ IL +R G Sbjct: 23 FTADNEYSLRLFMLFAIYAIVALGLNVLVGLAGLISLGQAGLFALGAYTGAILATRLGWD 82 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 +++GA G ++ P+++ RG YLA+ T+ I +N++I+W +T G GI Sbjct: 83 FIFAAMAGTVVAGAFGALLAYPTVRVRGVYLAVITIAFGLIVENVIIEWDHLTGGTTGIS 142 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + G + Y VL + FL I ++++ A Sbjct: 143 SIPKPALFGWPLDGFRY---------------YAVLAVLLFLVVVITHNIKQSRYGRAML 187 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 + ++ A + + AF ++S+ G+AG +A ISPD F F+++I + Sbjct: 188 AVSQSETAARGVGLNATGVRTLAFVIASSTAGLAGVLYAYLNLYISPDSFTFNDSIRFLL 247 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V+LGG + IL + E + L LV Sbjct: 248 MVVLGGAGTTVGALIGALILTYLPEY---------------LQQLQYWQQFAYGLLLALV 292 Query: 332 ILMRSHSLLRL 342 + + + Sbjct: 293 MFVLPQGIFGT 303 >gi|157158767|ref|YP_001464918.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli E24377A] gi|157080797|gb|ABV20505.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli E24377A] Length = 425 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|83644112|ref|YP_432547.1| leucine/isoleucine/valine transporter permease subunit [Hahella chejuensis KCTC 2396] gi|83632155|gb|ABC28122.1| ABC-type branched-chain amino acid transport system, permease component [Hahella chejuensis KCTC 2396] Length = 431 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 100/352 (28%), Positives = 161/352 (45%), Gaps = 34/352 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 LL+ L + + + LIYV+ GL+IVVG GLL L V YA+GA Sbjct: 94 VFFVALLIAAILIPFNTGRIWSDIATLALIYVILGLGLNIVVGLAGLLDLGYVAFYAVGA 153 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 YSY +L +GLS W+ +P+ A+++ G ++G P L+ RGDYLAI TL EI + +L Sbjct: 154 YSYALLSQYFGLSFWVCLPIGALLAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLN 213 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR-------------------SLIRFFRFPSSFVIY 179 +T G GI + FF P + Sbjct: 214 NLTSLTGGPNGIGGIPKPTIPMIQTNPEVAVVNLEFSRRASEGNVPYHEFFGVPYDSSLK 273 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + +Y + L + + I+ L R + AW +R+++ A SL KLSAF + + Sbjct: 274 VVVLYLIALALALATILIVRRLIRMPVGRAWEALREDEIACRSLGLNRTAIKLSAFTIGA 333 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 AF G AG+ + A + ISP+ F F E++I+++IV+LGGM S + A +++ + EL Sbjct: 334 AFAGFAGSLYGARQGHISPESFVFMESVIILAIVVLGGMGSQIGVMIAAVLVVLLQELTR 393 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 G Y + + L+++ L+ ++ P L++ Sbjct: 394 GFEEY---------------RMLAFGMIMVLMMIWCPQGLIPMKRPHLQLKQ 430 >gi|150017620|ref|YP_001309874.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] gi|149904085|gb|ABR34918.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] Length = 350 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 84/347 (24%), Positives = 152/347 (43%), Gaps = 38/347 (10%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 +S+ +Y +LA++Y L+FL YI + QI I+++ A GL++++ Sbjct: 16 LSLVKTTYTRYMITTVVLALIYVFLMFLVNQGIIGD-YILRIMKQIGIFLIAALGLNLIL 74 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G ++ +IGAY I+ + + + + V +++G ++G P L+ +GD Sbjct: 75 GFTGQFTMGHAAFMSIGAYGSAIMTKNFNMPFPIALLVGIILAGILAALIGYPILRLKGD 134 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLAI TL EI + ++ + G GI Sbjct: 135 YLAICTLGFGEIVKVVIQNVDYV-GGARGISGIPGST----------------------- 170 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + ++L L +I+ L ++ A +IR+++ A ++ K+ AF + S+ Sbjct: 171 --SFLIVLIGVALCYAILKNLIHSSKGRAIMSIREDEIAAEAMGINSTKYKMIAFIIGSS 228 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AG +A I P F FS++I +I+ V+LGGM SLS T+ILI + E G Sbjct: 229 MAGLAGGLYAHFNSFIDPASFAFSKSIELITYVVLGGMGSLSGTVIGTSILIYLPECLRG 288 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 ++ F + + L L+++ R +L R + Sbjct: 289 LSE-----------VFKTYRILIYAVMLVLMMIFRPQGILGTREITV 324 >gi|16131328|ref|NP_417913.1| leucine/isoleucine/valine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89110556|ref|AP_004336.1| leucine/isoleucine/valine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170082970|ref|YP_001732290.1| leucine/isoleucine/valine ABC transporter membrane component [Escherichia coli str. K-12 substr. DH10B] gi|238902547|ref|YP_002928343.1| leucine/isoleucine/valine transporter subunit [Escherichia coli BW2952] gi|253771715|ref|YP_003034546.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|301021803|ref|ZP_07185767.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 196-1] gi|301645897|ref|ZP_07245811.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 146-1] gi|307140138|ref|ZP_07499494.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli H736] gi|331644154|ref|ZP_08345283.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli H736] gi|585411|sp|P22729|LIVM_ECOLI RecName: Full=High-affinity branched-chain amino acid transport system permease protein livM; AltName: Full=LIV-I protein M gi|466592|gb|AAB18431.1| CG Site No. 18190 [Escherichia coli str. K-12 substr. MG1655] gi|1789865|gb|AAC76481.1| leucine/isoleucine/valine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|85676587|dbj|BAE77837.1| leucine/isoleucine/valine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|169890805|gb|ACB04512.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|238861639|gb|ACR63637.1| leucine/isoleucine/valine transporter subunit [Escherichia coli BW2952] gi|253322759|gb|ACT27361.1| inner-membrane translocator [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|260447528|gb|ACX37950.1| inner-membrane translocator [Escherichia coli DH1] gi|299881436|gb|EFI89647.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 196-1] gi|301075886|gb|EFK90692.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 146-1] gi|315138030|dbj|BAJ45189.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli DH1] gi|315614724|gb|EFU95364.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli 3431] gi|331036448|gb|EGI08674.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli H736] Length = 425 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|257095155|ref|YP_003168796.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047679|gb|ACV36867.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 358 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 92/343 (26%), Positives = 156/343 (45%), Gaps = 4/343 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + L ++ +LL + A + + ++YV A GL+IVVG GLL L Sbjct: 11 WQQHWLGLVLIGVVLLAVPFVAALGGQAWVRIANFAILYVFLALGLNIVVGYAGLLDLGY 70 Query: 71 VIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 V YA+GAY+Y +L S + L W+++PV A ++ G+++G P+LK RGDYLAI TL Sbjct: 71 VAFYAVGAYAYALLASPHFGIHLPFWVILPVGAGLACIFGVLLGAPTLKLRGDYLAIVTL 130 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + + N G + + S V Y++L Sbjct: 131 GFGEIIRIFMNNLNAPINVTNGAQGITLIDPIRIGGFSFADTSTILGVTVSGPQKYYFLL 190 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + + I + L+ + I AW+ IR+++ A + KL AFA+ ++F G+AG Sbjct: 191 VTLAIMIIMINVRLQDSRIGRAWQAIREDEVAAKACGINTRNIKLLAFAMGASFGGVAGG 250 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F+A + +SP+ F E+I ++++V+LGGM + + +L G+ E Sbjct: 251 VFSAMQGFVSPESFSLMESITILAMVVLGGMGHIPGVILGAVLLTGLPEALRYGIEPLQR 310 Query: 308 SLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 ++ + +AL LV+ R L L Sbjct: 311 AIFGRMIIDPESLRMLVFGLALVLVMRFRPAGLWPSSQRRREL 353 >gi|300946797|ref|ZP_07161041.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 116-1] gi|300956790|ref|ZP_07169057.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 175-1] gi|300316429|gb|EFJ66213.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 175-1] gi|300453554|gb|EFK17174.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 116-1] Length = 425 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|323966120|gb|EGB61557.1| branched-chain amino acid transport system/permease component protein [Escherichia coli M863] gi|323974903|gb|EGB70014.1| branched-chain amino acid transport system/permease component protein [Escherichia coli TW10509] gi|324111777|gb|EGC05757.1| branched-chain amino acid transport system/permease component protein [Escherichia fergusonii B253] gi|327251090|gb|EGE62783.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli STEC_7v] Length = 425 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|26250068|ref|NP_756108.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli CFT073] gi|110643696|ref|YP_671426.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli 536] gi|227883600|ref|ZP_04001405.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli 83972] gi|300985254|ref|ZP_07177351.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 45-1] gi|300987352|ref|ZP_07178160.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 200-1] gi|301050321|ref|ZP_07197210.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 185-1] gi|331659751|ref|ZP_08360689.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli TA206] gi|26110497|gb|AAN82682.1|AE016768_100 High-affinity branched-chain amino acid transport system permease protein livM [Escherichia coli CFT073] gi|110345288|gb|ABG71525.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli 536] gi|227839479|gb|EEJ49945.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli 83972] gi|281180483|dbj|BAI56813.1| leucine ABC transporter ABC transporter permease component [Escherichia coli SE15] gi|300297950|gb|EFJ54335.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 185-1] gi|300306220|gb|EFJ60740.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 200-1] gi|300408125|gb|EFJ91663.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 45-1] gi|307555550|gb|ADN48325.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli ABU 83972] gi|315291692|gb|EFU51048.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 153-1] gi|315295976|gb|EFU55285.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 16-3] gi|324009341|gb|EGB78560.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 57-2] gi|324014551|gb|EGB83770.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 60-1] gi|331052966|gb|EGI24999.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli TA206] Length = 425 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|91212937|ref|YP_542923.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli UTI89] gi|117625728|ref|YP_859051.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli APEC O1] gi|218560518|ref|YP_002393431.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli S88] gi|218691741|ref|YP_002399953.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli ED1a] gi|237703195|ref|ZP_04533676.1| leucine/isoleucine/valine transporter subunit LivM [Escherichia sp. 3_2_53FAA] gi|306816201|ref|ZP_07450339.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli NC101] gi|91074511|gb|ABE09392.1| high-affinity branched-chain amino acid transport system permease protein livM [Escherichia coli UTI89] gi|115514852|gb|ABJ02927.1| leucine/isoleucine/valine transporter subunit LivM [Escherichia coli APEC O1] gi|218367287|emb|CAR05065.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218429305|emb|CAR10265.2| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|226902459|gb|EEH88718.1| leucine/isoleucine/valine transporter subunit LivM [Escherichia sp. 3_2_53FAA] gi|294490164|gb|ADE88920.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli IHE3034] gi|305850597|gb|EFM51054.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli NC101] gi|307628522|gb|ADN72826.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli UM146] gi|315286141|gb|EFU45579.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 110-3] gi|320194043|gb|EFW68676.1| Branched-chain amino acid transport system permease protein LivM [Escherichia coli WV_060327] gi|323950118|gb|EGB46001.1| branched-chain amino acid transport system/permease component protein [Escherichia coli H252] gi|323954600|gb|EGB50382.1| branched-chain amino acid transport system/permease component protein [Escherichia coli H263] Length = 425 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|15803966|ref|NP_290002.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O157:H7 EDL933] gi|15833557|ref|NP_312330.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O157:H7 str. Sakai] gi|82545817|ref|YP_409764.1| leucine/isoleucine/valine transporter permease subunit [Shigella boydii Sb227] gi|168747054|ref|ZP_02772076.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4113] gi|168753220|ref|ZP_02778227.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4401] gi|168759490|ref|ZP_02784497.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4501] gi|168765815|ref|ZP_02790822.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4486] gi|168772639|ref|ZP_02797646.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4196] gi|168779551|ref|ZP_02804558.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4076] gi|168785273|ref|ZP_02810280.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC869] gi|168797238|ref|ZP_02822245.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC508] gi|187732154|ref|YP_001882157.1| leucine/isoleucine/valine transporter permease subunit [Shigella boydii CDC 3083-94] gi|194435868|ref|ZP_03067971.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli 101-1] gi|195934948|ref|ZP_03080330.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O157:H7 str. EC4024] gi|208807569|ref|ZP_03249906.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4206] gi|208812062|ref|ZP_03253391.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4045] gi|208820990|ref|ZP_03261310.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4042] gi|209396049|ref|YP_002272897.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4115] gi|209920913|ref|YP_002294997.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli SE11] gi|217324626|ref|ZP_03440710.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. TW14588] gi|218707050|ref|YP_002414569.1| leucine/isoleucine/valine permease [Escherichia coli UMN026] gi|254163380|ref|YP_003046488.1| leucine/isoleucine/valine transporter permease [Escherichia coli B str. REL606] gi|254795373|ref|YP_003080210.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O157:H7 str. TW14359] gi|261224737|ref|ZP_05939018.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261254368|ref|ZP_05946901.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291284794|ref|YP_003501612.1| High-affinity branched-chain amino acid ABC transporter permease protein LivM [Escherichia coli O55:H7 str. CB9615] gi|293407037|ref|ZP_06650961.1| livM [Escherichia coli FVEC1412] gi|293416860|ref|ZP_06659497.1| livM [Escherichia coli B185] gi|298382783|ref|ZP_06992378.1| livM [Escherichia coli FVEC1302] gi|300898847|ref|ZP_07117150.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 198-1] gi|300931005|ref|ZP_07146363.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 187-1] gi|12518110|gb|AAG58563.1|AE005569_3 high-affinity branched-chain amino acid transport [Escherichia coli O157:H7 str. EDL933] gi|13363777|dbj|BAB37726.1| high-affinity branched-chain amino acid transport protein [Escherichia coli O157:H7 str. Sakai] gi|81247228|gb|ABB67936.1| LivM [Shigella boydii Sb227] gi|187429146|gb|ACD08420.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Shigella boydii CDC 3083-94] gi|187771702|gb|EDU35546.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4196] gi|188018466|gb|EDU56588.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4113] gi|189002470|gb|EDU71456.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4076] gi|189358817|gb|EDU77236.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4401] gi|189364579|gb|EDU82998.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4486] gi|189369572|gb|EDU87988.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4501] gi|189374689|gb|EDU93105.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC869] gi|189379900|gb|EDU98316.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC508] gi|194425411|gb|EDX41395.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli 101-1] gi|208727370|gb|EDZ76971.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4206] gi|208733339|gb|EDZ82026.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4045] gi|208741113|gb|EDZ88795.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4042] gi|209157449|gb|ACI34882.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. EC4115] gi|209756088|gb|ACI76356.1| high-affinity branched-chain amino acid transport protein [Escherichia coli] gi|209756090|gb|ACI76357.1| high-affinity branched-chain amino acid transport protein [Escherichia coli] gi|209756092|gb|ACI76358.1| high-affinity branched-chain amino acid transport protein [Escherichia coli] gi|209756094|gb|ACI76359.1| high-affinity branched-chain amino acid transport protein [Escherichia coli] gi|209756096|gb|ACI76360.1| high-affinity branched-chain amino acid transport protein [Escherichia coli] gi|209914172|dbj|BAG79246.1| leucine ABC transporter ABC transporter permease component [Escherichia coli SE11] gi|217320847|gb|EEC29271.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O157:H7 str. TW14588] gi|218434147|emb|CAR15064.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|242378977|emb|CAQ33775.1| livM, subunit of branched chain amino acids ABC transporter and leucine ABC transporter [Escherichia coli BL21(DE3)] gi|253975281|gb|ACT40952.1| leucine/isoleucine/valine transporter subunit [Escherichia coli B str. REL606] gi|253979437|gb|ACT45107.1| leucine/isoleucine/valine transporter subunit [Escherichia coli BL21(DE3)] gi|254594773|gb|ACT74134.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|284923446|emb|CBG36541.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Escherichia coli 042] gi|290764667|gb|ADD58628.1| High-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli O55:H7 str. CB9615] gi|291425848|gb|EFE98882.1| livM [Escherichia coli FVEC1412] gi|291431436|gb|EFF04421.1| livM [Escherichia coli B185] gi|298276619|gb|EFI18137.1| livM [Escherichia coli FVEC1302] gi|300357468|gb|EFJ73338.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 198-1] gi|300461183|gb|EFK24676.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 187-1] gi|320187778|gb|EFW62453.1| Branched-chain amino acid transport system permease protein LivM [Shigella flexneri CDC 796-83] gi|320191527|gb|EFW66177.1| Branched-chain amino acid transport system permease protein LivM [Escherichia coli O157:H7 str. EC1212] gi|320639738|gb|EFX09332.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O157:H7 str. G5101] gi|320645237|gb|EFX14253.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O157:H- str. 493-89] gi|320650548|gb|EFX19014.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O157:H- str. H 2687] gi|320655741|gb|EFX23664.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661524|gb|EFX28939.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320666547|gb|EFX33530.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O157:H7 str. LSU-61] gi|323959692|gb|EGB55343.1| branched-chain amino acid transport system/permease component protein [Escherichia coli H489] gi|323970053|gb|EGB65328.1| branched-chain amino acid transport system/permease component protein [Escherichia coli TA007] gi|324018695|gb|EGB87914.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 117-3] gi|326337575|gb|EGD61410.1| Branched-chain amino acid transport system permease protein LivM [Escherichia coli O157:H7 str. 1044] gi|326344674|gb|EGD68423.1| Branched-chain amino acid transport system permease protein LivM [Escherichia coli O157:H7 str. 1125] gi|332090545|gb|EGI95643.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella boydii 3594-74] Length = 425 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|222035162|emb|CAP77907.1| High-affinity branched-chain amino acid transport system [Escherichia coli LF82] gi|312948009|gb|ADR28836.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli O83:H1 str. NRG 857C] Length = 425 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRSAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|331649260|ref|ZP_08350346.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli M605] gi|330909494|gb|EGH38008.1| branched-chain amino acid transport system permease protein LivM [Escherichia coli AA86] gi|331041758|gb|EGI13902.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli M605] Length = 425 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|170723818|ref|YP_001751506.1| inner-membrane translocator [Pseudomonas putida W619] gi|169761821|gb|ACA75137.1| inner-membrane translocator [Pseudomonas putida W619] Length = 433 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 98/329 (29%), Positives = 158/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 106 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ +F R + +F F + + +F+Y VL + Sbjct: 226 WLSFTGGPNGMPAPAPTFFGLEFGRRAKDGGVPIHEYFGFDYNANLKFVFIYAVLFLVVL 285 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R + AW +R+++ A S+ + KLSAF + ++ G+AG FFA Sbjct: 286 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 345 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + L+++ R L+R Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419 >gi|291440255|ref|ZP_06579645.1| branched chain amino acid transport permease [Streptomyces ghanaensis ATCC 14672] gi|291343150|gb|EFE70106.1| branched chain amino acid transport permease [Streptomyces ghanaensis ATCC 14672] Length = 611 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 134/347 (38%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V + T++ ++G+ ILI+ A GL+IVVG GLL L V +G Sbjct: 267 ITVCGAFIAAACFPFTQTDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 326 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ W + V A+ S G+++G P+L+ RGDYLAI TL E Sbjct: 327 AYAAALVSGSPSSPFGVHFPFWAAVLVGAVASLIFGVLIGAPTLRLRGDYLAIVTLGFGE 386 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ + + G + L + ++++L Sbjct: 387 IFRIAVNNTDGTSGPDLTNGSNGIASIPDLNILGFDFGIEHDIAGFTIGRFANYFFLMLL 446 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + I AW IR+++ A ++ KL AFAV + G+AG Sbjct: 447 ITAVVVLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGATLAGLAGTVQ 506 Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A ++P+ + + +++ V+LGGM +++ A+L + + + Sbjct: 507 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLGDF 566 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +AL L++ R L+ R Sbjct: 567 ---------------QLLAFGLALVLLMRFRPEGLIPNRRRQLEFHE 598 >gi|170681266|ref|YP_001745704.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli SMS-3-5] gi|170518984|gb|ACB17162.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli SMS-3-5] Length = 425 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|301329773|ref|ZP_07222512.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 78-1] gi|300844188|gb|EFK71948.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 78-1] Length = 425 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQTPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|295677427|ref|YP_003605951.1| inner-membrane translocator [Burkholderia sp. CCGE1002] gi|295437270|gb|ADG16440.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 389 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 150/350 (42%), Gaps = 17/350 (4%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N+ + + ++ + Y + ++YVM A GL++VVG GLL L Sbjct: 18 NRTKTLTIGILTTIFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDL 77 Query: 69 NCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGL 112 + YAIGAY+ +L S + + IW+++P++ ++ G+++G Sbjct: 78 GYIAFYAIGAYTAALLSSPHLSTQFEWIAALAPHGLNVPIWIIVPIAMALAAMFGILLGA 137 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 P+L+ RGDYLAI TL EI + + N G + + S + Sbjct: 138 PTLRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIAPVQIGGFSFAQSHSL 197 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 YY+ + L+ + I AW IR+++ A ++ KL Sbjct: 198 FGMQFPAVYLYYYLFVLCALFVIWTCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKL 257 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 AFA+ ++F G++GA F A + +SP+ F F E+++V++ V+LGGM + + +L Sbjct: 258 LAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLA 317 Query: 293 GVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 E N + + L +A+ +++L RS L Sbjct: 318 VFPEFLRSTMGPLQNMIFGHEMVDTEVIRQLLYGLAMVVIMLYRSEGLWP 367 >gi|239931887|ref|ZP_04688840.1| branched chain amino acid transport permease [Streptomyces ghanaensis ATCC 14672] Length = 608 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 134/347 (38%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V + T++ ++G+ ILI+ A GL+IVVG GLL L V +G Sbjct: 264 ITVCGAFIAAACFPFTQTDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 323 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ W + V A+ S G+++G P+L+ RGDYLAI TL E Sbjct: 324 AYAAALVSGSPSSPFGVHFPFWAAVLVGAVASLIFGVLIGAPTLRLRGDYLAIVTLGFGE 383 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ + + G + L + ++++L Sbjct: 384 IFRIAVNNTDGTSGPDLTNGSNGIASIPDLNILGFDFGIEHDIAGFTIGRFANYFFLMLL 443 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + I AW IR+++ A ++ KL AFAV + G+AG Sbjct: 444 ITAVVVLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGATLAGLAGTVQ 503 Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A ++P+ + + +++ V+LGGM +++ A+L + + + Sbjct: 504 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLGDF 563 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +AL L++ R L+ R Sbjct: 564 ---------------QLLAFGLALVLLMRFRPEGLIPNRRRQLEFHE 595 >gi|295701316|ref|YP_003610317.1| inner-membrane translocator [Burkholderia sp. CCGE1002] gi|295441639|gb|ADG20806.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 389 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 151/350 (43%), Gaps = 17/350 (4%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N+ + + ++ + Y + ++YVM A GL++VVG GLL L Sbjct: 18 NRTKTLTIGILTTIFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDL 77 Query: 69 NCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGL 112 + YAIGAY+ +L S + + IW+++P++ ++ G+++G Sbjct: 78 GYIAFYAIGAYTAALLSSPHLSTQFEWIAALAPHGLNVPIWIIVPIAMALAAMFGILLGA 137 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 P+L+ RGDYLAI TL EI + + N G + + S + Sbjct: 138 PTLRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIAPVQIGGFSFAQSHSL 197 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 YY+ + L+ + I AW IR+++ A ++ KL Sbjct: 198 FGMQFPAVYLYYYLFVLCALFVIWTCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKL 257 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 AFA+ ++F G++GA F A + +SP+ F F E+++V++ V+LGGM + + +L Sbjct: 258 LAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLA 317 Query: 293 GVVELCCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 E N + + + L +A+ +++L RS L Sbjct: 318 VFPEFLRSTMGPLQNMIFGHEIVDTEVIRQLLYGLAMVVIMLYRSEGLWP 367 >gi|219848759|ref|YP_002463192.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485] gi|219543018|gb|ACL24756.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485] Length = 449 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 81/354 (22%), Positives = 138/354 (38%), Gaps = 19/354 (5%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + L + + + Q I+ A GL++VVG GLL L Sbjct: 67 RVATWFKVVLGVFALGVVLPYFGLLNPFYIDVATQAGIFTALALGLNVVVGFAGLLDLGY 126 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG------------LPSLKFR 118 V +A+GAY++ I+ + I I +I+G LP L+ R Sbjct: 127 VAFFAVGAYTWGIMSTPQITEINPAWSPVDPILFYPFLIIGLILGLITGVLLGLPVLRLR 186 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV- 177 GDYLAI TL E+ + + N G + + IR + Sbjct: 187 GDYLAIVTLGFGEVIRVVANNLDRPVNVTNGSQGIRAIERPPLIIVDQIRNLGIQADDNQ 246 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +Y++F YY+++ + LS ++ L+ + I AW IR+++ A + + KL AFA+ Sbjct: 247 LYQLFFYYLVIIIVLLSVIVVARLKHSRIGRAWEAIREDEIAAVAQGIPRVRMKLLAFAI 306 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G+ G FAA + I+P F +I ++++VILGGM S+ I+ + Sbjct: 307 GASFAGVMGVVFAAKQLFINPPTFDLLRSINILAMVILGGMGSIPGAMLGAIIVTMLDLQ 366 Query: 298 CCGMNFYYFNSLLKFD------CSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L + L L+++ R L Sbjct: 367 ILPRIAAVLREAQAAGAPIPRQFDPTQYQRLLFGLLLVLMMIFRQEGLWPDERR 420 >gi|293453761|ref|ZP_06664180.1| livM [Escherichia coli B088] gi|307311879|ref|ZP_07591517.1| inner-membrane translocator [Escherichia coli W] gi|291321887|gb|EFE61318.1| livM [Escherichia coli B088] gi|306908023|gb|EFN38523.1| inner-membrane translocator [Escherichia coli W] gi|315062733|gb|ADT77060.1| leucine/isoleucine/valine transporter subunit [Escherichia coli W] gi|323376679|gb|ADX48947.1| inner-membrane translocator [Escherichia coli KO11] gi|323944322|gb|EGB40397.1| branched-chain amino acid transport system/permease component protein [Escherichia coli H120] Length = 425 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|260870181|ref|YP_003236583.1| high-affinity branched-chain amino acid transport, membrane component [Escherichia coli O111:H- str. 11128] gi|257766537|dbj|BAI38032.1| high-affinity branched-chain amino acid transport, membrane component [Escherichia coli O111:H- str. 11128] gi|323179018|gb|EFZ64592.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli 1180] Length = 425 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|156741873|ref|YP_001432002.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941] gi|156233201|gb|ABU57984.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941] Length = 454 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 84/352 (23%), Positives = 149/352 (42%), Gaps = 19/352 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + LL + + + + ++ A GL++VVG GLL L V +A+G Sbjct: 78 LTLGTILLAVVMPVFGVLNPFYIDVVTKAGMFAALALGLNVVVGFAGLLDLGYVAFFAVG 137 Query: 78 AYSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 AY + I + +G WL + + + G+++GLP L+ RGDYLAI Sbjct: 138 AYLWGIFSTPQISNIVPGMEPLHGSWFWLFLAIGLAVGAFFGVLLGLPVLRLRGDYLAIV 197 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI-YEIFMY 184 TL + E+ + + N G + V + + S V Y+++ Y Sbjct: 198 TLGLGEVIRVLATNLDRPINITNGAQGIKDVGRPPLFVEPVFQALGMTISRVQEYQLYFY 257 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 +++L + L+ ++ L + I AW IR+++ A ++ ++ KL AFAV ++F G Sbjct: 258 FLVLLVLALTVFVVHRLNDSRIGRAWTAIREDETAAIAMGIPLVRMKLLAFAVGASFAGT 317 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G F+A + I+P F +I ++S+VILGGM S+ I+ + Sbjct: 318 MGVIFSALQTFINPPTFDLLRSIGILSMVILGGMGSIPGTMLGAVIVTLLDLQLLPRIAG 377 Query: 305 YFNSL------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 +L + L + L ++++ R LL L Sbjct: 378 ELAALQRRGVPIPSWFDPAQYQRLLFGLLLVIMMIFRPEGLLPEDRRRQELH 429 >gi|193068875|ref|ZP_03049835.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli E110019] gi|260857562|ref|YP_003231453.1| high-affinity branched-chain amino acid transport, membrane component [Escherichia coli O26:H11 str. 11368] gi|300907399|ref|ZP_07125046.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 84-1] gi|300926850|ref|ZP_07142617.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 182-1] gi|301302338|ref|ZP_07208470.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 124-1] gi|309794732|ref|ZP_07689154.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 145-7] gi|331665064|ref|ZP_08365965.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli TA143] gi|331674940|ref|ZP_08375697.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli TA280] gi|192957951|gb|EDV88394.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli E110019] gi|257756211|dbj|BAI27713.1| high-affinity branched-chain amino acid transport, membrane component [Escherichia coli O26:H11 str. 11368] gi|300400814|gb|EFJ84352.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 84-1] gi|300417109|gb|EFK00420.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 182-1] gi|300842501|gb|EFK70261.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 124-1] gi|308121782|gb|EFO59044.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 145-7] gi|315256048|gb|EFU36016.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 85-1] gi|323154293|gb|EFZ40496.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli EPECa14] gi|331057574|gb|EGI29560.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli TA143] gi|331067849|gb|EGI39247.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli TA280] Length = 425 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|193061716|ref|ZP_03042813.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli E22] gi|194426952|ref|ZP_03059504.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli B171] gi|256020802|ref|ZP_05434667.1| leucine/isoleucine/valine transporter permease subunit [Shigella sp. D9] gi|260846240|ref|YP_003224018.1| high-affinity branched-chain amino acid transport, membrane component [Escherichia coli O103:H2 str. 12009] gi|300822742|ref|ZP_07102879.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 119-7] gi|331670279|ref|ZP_08371118.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli TA271] gi|331679521|ref|ZP_08380191.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli H591] gi|332282007|ref|ZP_08394420.1| leucine/isoleucine/valine transporter permease subunit [Shigella sp. D9] gi|192932506|gb|EDV85103.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli E22] gi|194414913|gb|EDX31183.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Escherichia coli B171] gi|257761387|dbj|BAI32884.1| high-affinity branched-chain amino acid transport, membrane component [Escherichia coli O103:H2 str. 12009] gi|300524742|gb|EFK45811.1| amino acid or sugar ABC transport system, permease protein [Escherichia coli MS 119-7] gi|323162695|gb|EFZ48534.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli E128010] gi|331062341|gb|EGI34261.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli TA271] gi|331072693|gb|EGI44018.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli H591] gi|332104359|gb|EGJ07705.1| leucine/isoleucine/valine transporter permease subunit [Shigella sp. D9] Length = 425 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|121608836|ref|YP_996643.1| leucine/isoleucine/valine transporter permease subunit [Verminephrobacter eiseniae EF01-2] gi|121553476|gb|ABM57625.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 427 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L + + + + LIYV+ GL+IVVG GLL L V YA+G Sbjct: 101 MAIGVLFVAGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L +GL+ W +P++ +S G ++G P L+ RGDYLAI TL EI + +L Sbjct: 161 YTYALLNQYFGLTFWECLPIAGAMSALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLN 220 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G GI + G + R+ + S IF+Y + L Sbjct: 221 NLTSLTGGPDGISGIPKPTVFGIEMARSAKVEGDRTFHELLGWTYSGEHMVIFLYLLALL 280 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + L R + AW +R+++ A SL KLSAF + ++F G+ GAFF Sbjct: 281 LVGATLLVSSRLIRMPMGRAWEALREDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ +++++V+LGGM S + A +L + EL Y Sbjct: 341 AARQGLVNPESFTFIESALILAVVVLGGMGSQLGVILAALLLTALPELTREFAEY----- 395 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL R P L R Sbjct: 396 ----------RMLIFGLVMILMMMWRPQGLLPARRPHVELPR 427 >gi|254254444|ref|ZP_04947761.1| ABC-type branched-chain amino acid transport system permease component [Burkholderia dolosa AUO158] gi|124899089|gb|EAY70932.1| ABC-type branched-chain amino acid transport system permease component [Burkholderia dolosa AUO158] Length = 423 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 99/341 (29%), Positives = 157/341 (46%), Gaps = 24/341 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V+ LL + + + LIYV+ GL+IVVG GLL L V YA+G Y Sbjct: 98 IVWALLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGGY 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L +G + W +P++A+ S G ++G P L+ RGDYLAI TL EI + + Sbjct: 158 TYAMLNQYFGFTFWECLPLAAIASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLANN 217 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLGM 190 +T G GI + G + + S IF+Y + L + Sbjct: 218 LTSLTGGPDGISGIPKPTVFGIEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLLALLL 277 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + L R + AW +RD++ A SL KLSAF + +AF G+ GAFFA Sbjct: 278 VGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFFA 337 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Y Sbjct: 338 ARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY------ 391 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL P L + Sbjct: 392 ---------RMLMFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >gi|82778718|ref|YP_405067.1| leucine/isoleucine/valine transporter permease subunit [Shigella dysenteriae Sd197] gi|309785775|ref|ZP_07680406.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella dysenteriae 1617] gi|81242866|gb|ABB63576.1| high-affinity branched-chain amino acid transport [Shigella dysenteriae Sd197] gi|308926895|gb|EFP72371.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella dysenteriae 1617] Length = 425 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|302561199|ref|ZP_07313541.1| branched chain amino acid transport permease [Streptomyces griseoflavus Tu4000] gi|302478817|gb|EFL41910.1| branched chain amino acid transport permease [Streptomyces griseoflavus Tu4000] Length = 611 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 76/347 (21%), Positives = 134/347 (38%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V + T++ ++G+ ILI+ A GL+IVVG GLL L V +G Sbjct: 267 ITVCGAFIAAACFPFTQTDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 326 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ W + V A+ S G+++G P+L+ RGDYLAI TL E Sbjct: 327 AYAAALVSGSPSSPFGVHFPFWAAVIVGAVASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 386 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ + G + L L + ++++L Sbjct: 387 IFRIAANNTDGTSGPDLTNGSNGIASIPDLNILGFDLGVPHDIAGFTIGRFANYFFLMLL 446 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + I AW IR+++ A ++ KL AFAV + G+AG Sbjct: 447 ITAVVVLVFRRSGDSRIGRAWVAIREDETAAEAMGIHGFRVKLIAFAVGATLAGLAGTVQ 506 Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A ++P+ + + +++ V+LGGM +++ A+L + + Y Sbjct: 507 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLGDY 566 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +AL L++ R L+ R Sbjct: 567 ---------------QLLAFGLALVLLMRFRPEGLIPNRRRQLEFHE 598 >gi|254250986|ref|ZP_04944304.1| Sulfate-transporting ATPase [Burkholderia dolosa AUO158] gi|124893595|gb|EAY67475.1| Sulfate-transporting ATPase [Burkholderia dolosa AUO158] Length = 594 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 122/326 (37%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L +V L + G + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWLFLVVLFALPVLPGVLQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+ L + YG+S WL + V ++ +++G+ +++ G +L + T+ Sbjct: 70 VGAYTTAFLTTHYGVSPWLALLVGVALTALVALVLGMVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGVELDS--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|300690696|ref|YP_003751691.1| leucine/isoleucine/valine transporter subunit ; inner-membrane translocator, membrane component of ABC superfamily [Ralstonia solanacearum PSI07] gi|299077756|emb|CBJ50394.1| leucine/isoleucine/valine transporter subunit ; Inner-membrane translocator, membrane component of ABC superfamily [Ralstonia solanacearum PSI07] Length = 378 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 93/344 (27%), Positives = 152/344 (44%), Gaps = 17/344 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 LL + FL Y + L+Y+M A GL+IVVG GLL L + Y Sbjct: 16 AALLGFFILAIFAPFLVGAVGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 75 Query: 75 AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY +LGS + +W +IP+ A ++ G+++G P+LK R Sbjct: 76 AVGAYMMALLGSPHLTNQFEWIHQLFPNGLHTLVWWVIPLGAGLAALFGILLGAPTLKLR 135 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + + N G + + + + Sbjct: 136 GDYLAIVTLGFGEIIRIFMNNLDRPLNITNGPKGVNLIEPVKLFGFDFSKRHDIFGIHFE 195 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+ + + ++ L L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 196 PVHMYYYLFVILAMGIITVCLRLQNSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAMG 255 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 ++F G++GA FA+ + +SP+ F E+I +++IV+LGGM + + +L+G EL Sbjct: 256 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGILLVGFQELL 315 Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + N L + L +A+ V+L R L Sbjct: 316 RALAEPVQNKLFGHVIVEAEVLRQLLFGLAMVGVMLYRPAGLWP 359 >gi|70734102|ref|YP_257742.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas fluorescens Pf-5] gi|68348401|gb|AAY96007.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas fluorescens Pf-5] Length = 431 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 99 IIPALIVIAIVFPFFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 158 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 159 GLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 218 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V + R FF + + +F+Y VL + Sbjct: 219 WLSFTGGPNGMPVPSPTFLGLEFGRKAKDGGVPFHEFFGLEYNPNLKFLFIYIVLFLVVL 278 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R + AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 279 LVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFTIGASTAGLAGVFFASY 338 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 339 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 390 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 391 -------RVLLFGILMVLMMIWRPRGLIR 412 >gi|331685100|ref|ZP_08385686.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli H299] gi|331077471|gb|EGI48683.1| high-affinity branched-chain amino acid transport system permease protein LivM [Escherichia coli H299] Length = 425 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|218702201|ref|YP_002409830.1| leucine/isoleucine/valine transporter permease subunit [Escherichia coli IAI39] gi|218372187|emb|CAR20049.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] Length = 425 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|90423132|ref|YP_531502.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90105146|gb|ABD87183.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 445 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 116/334 (34%), Positives = 177/334 (52%), Gaps = 19/334 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + FL Q+YI +GI +L YVM WGL++VVG GLL L V YA+GAYS Sbjct: 113 LLLGFTFLMPVIFYDQRYILDLGILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAVGAYS 172 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L + + LS W+ +P++ +++ GM++G P L+ RGDYLAI TL EI + ++I W Sbjct: 173 YALLATNFDLSFWVCLPLAGILAAFWGMMLGFPVLRLRGDYLAIVTLAFGEIIRLVIINW 232 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRF----FRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + +T G GI R G + S +F++Y++L + L+ Sbjct: 233 QSLTGGPNGISGIPRPTLFGIPLTPAEDGLAARLGIEFSPTHRIVFLFYLILALALLTNW 292 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + LRR I AW +R+++ A +L KL+AFA + F G AGAFFA + I Sbjct: 293 VTIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFATGAMFGGFAGAFFATRQGFI 352 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP+ F F E+ +V++IV+LGGM S +A A +IG EL G++ Y Sbjct: 353 SPESFTFQESALVLAIVVLGGMGSQLGVALAAVAMIGGFELFRGLDQY------------ 400 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + +A+ L+++ R L+ R P+ FLE Sbjct: 401 ---RMLVFGLAMVLLMIWRPRGLIGHRAPTVFLE 431 >gi|28872031|ref|NP_794650.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. tomato str. DC3000] gi|28855284|gb|AAO58345.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. tomato str. DC3000] gi|331014637|gb|EGH94693.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 437 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVVAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R + +F F + + IF+Y VL + Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|24114716|ref|NP_709226.1| leucine/isoleucine/valine transporter permease subunit [Shigella flexneri 2a str. 301] gi|30065267|ref|NP_839438.1| leucine/isoleucine/valine transporter permease subunit [Shigella flexneri 2a str. 2457T] gi|24053930|gb|AAN44933.1| high-affinity branched-chain amino acid transport protein, membrane component [Shigella flexneri 2a str. 301] gi|30043529|gb|AAP19249.1| high-affinity branched-chain amino acid transport protein, membrane component [Shigella flexneri 2a str. 2457T] gi|281602804|gb|ADA75788.1| High-affinity branched-chain amino acid transport protein, membrane component [Shigella flexneri 2002017] gi|313647246|gb|EFS11698.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella flexneri 2a str. 2457T] gi|332749445|gb|EGJ79862.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella flexneri K-671] gi|332750291|gb|EGJ80702.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella flexneri 4343-70] gi|332751346|gb|EGJ81749.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella flexneri 2747-71] gi|332763561|gb|EGJ93800.1| branched-chain amino acid transport system / permease component family protein [Shigella flexneri 2930-71] gi|332996242|gb|EGK15869.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella flexneri VA-6] gi|332996596|gb|EGK16221.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella flexneri K-272] gi|332997277|gb|EGK16893.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella flexneri K-218] gi|333012369|gb|EGK31750.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella flexneri K-304] gi|333013005|gb|EGK32381.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Shigella flexneri K-227] Length = 425 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|323188954|gb|EFZ74238.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli RN587/1] Length = 425 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 101/329 (30%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG G+L L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGMLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|237798305|ref|ZP_04586766.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021157|gb|EGI01214.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. oryzae str. 1_6] Length = 437 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R + +F F + + IF+Y VL + Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGIPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|187929777|ref|YP_001900264.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|241663903|ref|YP_002982263.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|309781507|ref|ZP_07676243.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Ralstonia sp. 5_7_47FAA] gi|187726667|gb|ACD27832.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|240865930|gb|ACS63591.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|308919920|gb|EFP65581.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Ralstonia sp. 5_7_47FAA] Length = 375 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 92/344 (26%), Positives = 154/344 (44%), Gaps = 17/344 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + F+ Y + L+Y+M A GL+IVVG GLL L + Y Sbjct: 13 AALYGFLILAIFAPFIVGAAGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 72 Query: 75 AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY +LGS + L +W +IP+ A ++ G+++G P LK R Sbjct: 73 AVGAYMMALLGSPHLSNQFEWIHNLFPNGLHLIVWWVIPLGAGLAALFGILLGTPVLKLR 132 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + + N G + + + + F Sbjct: 133 GDYLAIVTLGFGEIIRIFMNNLDRPVNITNGPKGINLIEPVKIFGFDFSKRHDFFGIRFD 192 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+ + + + + L L+ + I AW +R+++ A ++ KL AFA+ Sbjct: 193 SVYMYYYLFVILAAIIIIVCLRLQNSRIGRAWVALREDEIAAKAMGINTRNIKLLAFAMG 252 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 ++F G++GA FA+ + +SP+ F E+I +++IV+LGGM + + +L+G EL Sbjct: 253 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGILLVGFQELL 312 Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + N L + L +A+ +V+L R L Sbjct: 313 RALAEPVQNKLFGHVIVEAEVLRQLLFGLAMVVVMLYRPSGLWP 356 >gi|206577351|ref|YP_002236179.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Klebsiella pneumoniae 342] gi|288933166|ref|YP_003437225.1| inner-membrane translocator [Klebsiella variicola At-22] gi|290511969|ref|ZP_06551337.1| branched-chain amino acid transport system permease [Klebsiella sp. 1_1_55] gi|206566409|gb|ACI08185.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivM [Klebsiella pneumoniae 342] gi|288887895|gb|ADC56213.1| inner-membrane translocator [Klebsiella variicola At-22] gi|289775759|gb|EFD83759.1| branched-chain amino acid transport system permease [Klebsiella sp. 1_1_55] Length = 425 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLIALLVIAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + F G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRVQLKLK 416 >gi|320175714|gb|EFW50802.1| Branched-chain amino acid transport system permease protein LivM [Shigella dysenteriae CDC 74-1112] Length = 425 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIVTLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|330963370|gb|EGH63630.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. actinidiae str. M302091] Length = 437 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R + +F F + + IF+Y VL + Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|152972326|ref|YP_001337472.1| leucine/isoleucine/valine transporter permease subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896915|ref|YP_002921660.1| leucine/isoleucine/valine transporter permease subunit [Klebsiella pneumoniae NTUH-K2044] gi|329998309|ref|ZP_08303046.1| branched-chain amino acid ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150957175|gb|ABR79205.1| high-affinity branched-chain amino acid transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549242|dbj|BAH65593.1| high-affinity branched-chain amino acid transporter membrane component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328538753|gb|EGF64838.1| branched-chain amino acid ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 425 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLIALLVIAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + F G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFSRSAREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + L+ Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRVQLKLK 416 >gi|256025820|ref|ZP_05439685.1| leucine/isoleucine/valine transporter permease subunit [Escherichia sp. 4_1_40B] Length = 425 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 101/329 (30%), Positives = 156/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+ GGM S + A +L+ EL N Y Sbjct: 343 TFAESAFVLAIVVFGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|323174093|gb|EFZ59721.1| high-affinity branched-chain amino acid transport system permeaseprotein livM [Escherichia coli LT-68] Length = 422 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 100 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 159 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 160 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 219 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 220 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 279 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 280 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 339 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 340 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 384 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 385 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 413 >gi|94311797|ref|YP_585007.1| inner-membrane translocator [Cupriavidus metallidurans CH34] gi|93355649|gb|ABF09738.1| leucine/isoleucine/valine transporter subunit, membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 384 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 94/345 (27%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + L+ + L F T Y + L+Y+M A GL+IVVG GLL L + Sbjct: 21 LAALVGFLVVALCAPFFVQTFGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAF 80 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY +LGS + LS+W ++P++ +++ G+++G P+LK Sbjct: 81 YAVGAYMMALLGSPHLSNQFEWIHQLFPNGLHLSMWFVLPIAVVVAATFGVLLGAPTLKL 140 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + + Sbjct: 141 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITAVDPVHIFGFDFSKSHEIFGLKF 200 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+L+ + + I L L+ + I A+ IR+++ A ++ KL AFA+ Sbjct: 201 TPVFMYYYLLVALVIVIVFICLRLQNSRIGRAFVAIREDEIAAKAMGINTRNIKLLAFAM 260 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G +GA F A + +SP+ F E+I V++IV+LGGM + + +L+G EL Sbjct: 261 GASFGGASGATFGAFQGFVSPESFTLWESIYVLAIVVLGGMGHIPGVILGGILLVGFQEL 320 Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L +AL V+L R L Sbjct: 321 LRAVAEPIQTGIFGQVIVDAEVLRQLLFGLALVGVMLYRPAGLWP 365 >gi|254246684|ref|ZP_04940005.1| ABC branched-chain amino acid family transporter [Burkholderia cenocepacia PC184] gi|124871460|gb|EAY63176.1| ABC branched-chain amino acid family transporter [Burkholderia cenocepacia PC184] Length = 603 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L +V L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 19 FWLFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 78 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 79 IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 138 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 139 LFGNLELL-GKYDGINGIPALNLFGIVLES--------------GRSLYFLIWAVVLAAI 183 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 184 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 243 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 244 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 300 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 301 ----EIIVFGVLMVLLLQYARQGVWP 322 >gi|187925876|ref|YP_001897518.1| branched-chain amino acid ABC transporter ATPase/inner membrane protein [Burkholderia phytofirmans PsJN] gi|187717070|gb|ACD18294.1| ABC transporter related [Burkholderia phytofirmans PsJN] Length = 594 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/327 (16%), Positives = 119/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 FFWLFLVVLFALPVLPQPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ L +RYG+S WL + ++ +++GL +++ G +L + T+ Sbjct: 69 GIGAYATAYLTTRYGVSPWLALIAGVAVTALIALMLGLVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + GI L G + S +YY++ + + Sbjct: 129 YLFGNLEML-GKYDGINGIPVLNVFGIDLESGRH--------------IYYLIWLVVLGA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 VISVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWMRVVIFVYAAVLAAVSGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG++ + AIL + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + I + L++ + Sbjct: 292 -----EVIVFGILMVLLLQYARQGVWP 313 >gi|213967949|ref|ZP_03396095.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. tomato T1] gi|302059291|ref|ZP_07250832.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. tomato K40] gi|302131563|ref|ZP_07257553.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927292|gb|EEB60841.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. tomato T1] Length = 437 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVVAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R + +F F + + IF+Y VL + Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|320181948|gb|EFW56854.1| Branched-chain amino acid transport system permease protein LivM [Shigella boydii ATCC 9905] Length = 425 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPIFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E V++IV+LGGM S + A +L+ EL N Y Sbjct: 343 TFAEPAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416 >gi|71733297|ref|YP_272892.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. phaseolicola 1448A] gi|289623768|ref|ZP_06456722.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646550|ref|ZP_06477893.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. aesculi str. 2250] gi|298484889|ref|ZP_07002988.1| branched-chain amino acid transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71553850|gb|AAZ33061.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160576|gb|EFI01598.1| branched-chain amino acid transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330865920|gb|EGH00629.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330886855|gb|EGH20290.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. mori str. 301020] Length = 437 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R + +F F + + +F+Y VL + Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGIPIHEYFGFDYNPDLKFLFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|320321856|gb|EFW77952.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. glycinea str. B076] gi|320331037|gb|EFW87011.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. glycinea str. race 4] gi|330872281|gb|EGH06430.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. glycinea str. race 4] Length = 437 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R + +F F + + +F+Y VL + Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGIPIHEYFGFDYNPDLKFLFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|78064750|ref|YP_367519.1| branched chain amino acid ABC transporter ATPase/inner membrane protein [Burkholderia sp. 383] gi|77965495|gb|ABB06875.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Burkholderia sp. 383] Length = 594 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 125/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + +V L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ +L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 70 IGAYATALLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELES--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|330873759|gb|EGH07908.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 437 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R + +F F + + IF+Y VL + Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|317048652|ref|YP_004116300.1| inner-membrane translocator [Pantoea sp. At-9b] gi|316950269|gb|ADU69744.1| inner-membrane translocator [Pantoea sp. At-9b] Length = 427 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 101/328 (30%), Positives = 155/328 (47%), Gaps = 22/328 (6%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 S KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY + GL Sbjct: 110 FPFLSSKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYEYLGL 169 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W ++P++A+++ G ++G P L+ GDYLAI TL EI + +L W T G G+ Sbjct: 170 GFWSMLPLAALMAAFAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGV 229 Query: 151 YVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 V +F R FF + + IF+Y VL+ + L I L R Sbjct: 230 SVPSPTFFGLEFGRRAREGGVPYNEFFHLDYNPNMKFIFIYVVLVLVVLLVLWIKHRLTR 289 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 I AW +R+++ A ++ + KLSAF + ++ G+AG FFA + ++P F F Sbjct: 290 MPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFATYQGFVNPTSFTF 349 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 E+ ++++IV+LGGM S + A +L EL Y L Sbjct: 350 FESALILAIVVLGGMGSTLGVVLAAFVLTVAPELLRSFAEY---------------RVLL 394 Query: 324 MVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R L+R L + Sbjct: 395 FGMLMVLMMIWRPRGLVRTARVGVPLRK 422 >gi|66043866|ref|YP_233707.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] gi|63254573|gb|AAY35669.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] gi|330971585|gb|EGH71651.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str. M302273PT] Length = 437 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V + R + +F F + + IF+Y VL + Sbjct: 224 WLSFTGGPNGVPVPAPTFLGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|77456782|ref|YP_346287.1| inner-membrane translocator [Pseudomonas fluorescens Pf0-1] gi|77380785|gb|ABA72298.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Pseudomonas fluorescens Pf0-1] Length = 433 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 98/329 (29%), Positives = 153/329 (46%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ ++ S Y+ + I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 100 IIPLMIAIAVALPFFSNSYLLGVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 159 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ +G G I+G P L+ GDYLAI TL EI + +L Sbjct: 160 GLALGYQYLGLGFWTVLPLAAITAGLAGCILGFPVLRLHGDYLAIVTLGFGEIIRLVLNN 219 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W +T G G+ +F + FF + + F+Y VL + Sbjct: 220 WLSLTGGPNGMPAPLPTFFGLEFGKRAKDGGVPFHEFFGIAYNPDVKYYFIYAVLFLVVL 279 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L + + AW +R+++ A S+ + KLSAF + ++ G+AG FFA Sbjct: 280 AVLYIKHRLVKMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFATY 339 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL G Y Sbjct: 340 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRGFAEY-------- 391 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 392 -------RVLLFGILMVLMMIWRPRGLIR 413 >gi|40063655|gb|AAR38444.1| branched-chain amino acid ABC transporter, ATP-binding/permease protein [uncultured marine bacterium 582] Length = 844 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 127/325 (39%), Gaps = 30/325 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ + L L T+ + +ILIY + A G +I++G GL+S I + + A Sbjct: 9 LLILTVCGLLLLPLTELTGLTTTTASEILIYAIAALGFNILLGYTGLVSFGHGIFFGVAA 68 Query: 79 YSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ I+ + + + +S + + G+ +G SL+ G Y ++ TL + + ++ Sbjct: 69 YAASIIQVKLMPGFIITPMILSVLFTTILGLGIGFLSLRLSGVYFSLLTLSFAAMTFYVI 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W T G+ G +R G + + +Y+++ + + Sbjct: 129 YRWTHFTGGEDGYGGMERPTLFGIDLNNQT--------------AFFYMVMLIFIAVVFL 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I L + + IR+N + + + +L +F +S+ F+G+AG+ F + I Sbjct: 175 INRLVNSPFGSVLTAIRENSQRASFIGYDVKKYRLISFTLSAFFVGIAGSIFPFLKYYIG 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 ++ + + ++++ ILGG A I EL + Sbjct: 235 AELVHVAHSGEILALSILGGSRHFMGPALGALFFILFRELLSEYTSSW------------ 282 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 L + +L L+ L Sbjct: 283 ---QLLFGLMFMGFVLFSPKGLMGL 304 >gi|297161383|gb|ADI11095.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 579 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 75/358 (20%), Positives = 140/358 (39%), Gaps = 28/358 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R++ + ++ L+ + T+ + +G+ ILI+ A GL+IVVG GLL Sbjct: 213 RMSALTAKYRSVTLLAALVTAVAFPFTQDKASYTELGVNILIFATVALGLNIVVGLAGLL 272 Query: 67 SLNCVIAYAIGAYSYVI------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 L V +GAY+ + W + A++S G+++G P+L+ RGD Sbjct: 273 DLGYVAFLGVGAYTAALVSGSTSSTLDVHFPFWAAVIAGAVVSLIFGVVIGAPTLRLRGD 332 Query: 121 YLAIATLIMSEIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 YLAI TL EIF+ + ++ G + L + + Sbjct: 333 YLAIVTLGFGEIFRLAMQNMDGVSGPSVTNGPNGIPNIPPLEIFGFNFDEDHTVLGRTLD 392 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + ++L + + + + I AW IR+++ A ++ KL AFA+ Sbjct: 393 SNANYFLLMLLVTVVVVLVFSRAGNSRIGRAWVAIREDETAATAMGINGFRVKLIAFALG 452 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIG 293 + G+AG +A + + P+ + F+ + +++ VILGGM ++ +L Sbjct: 453 ATLAGVAGTVWAHVQTTVVPEQYVFAGPVPPNSTFLLAAVILGGMGTIGGPLLGATLLFL 512 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + Y IAL L++ R ++ R Sbjct: 513 IPKKLEFFQDY---------------QLLAFGIALILIMRFRPEGIIPNRRQQLEYHE 555 >gi|163846509|ref|YP_001634553.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl] gi|222524294|ref|YP_002568765.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl] gi|163667798|gb|ABY34164.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl] gi|222448173|gb|ACM52439.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl] Length = 449 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 78/364 (21%), Positives = 143/364 (39%), Gaps = 19/364 (5%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + + + L + + + Q I+ A GL++VV Sbjct: 57 MLSMLVAYRSRVAGWFKVVLGVFALGIVLPYFGTLNPFYIDVATQAGIFTALALGLNVVV 116 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY------------GLSIWLLIPVSAMISGACGM 108 G GLL L V +A+GAY++ I + + + + + ++ G+ Sbjct: 117 GFAGLLDLGYVAFFAVGAYAWAIFSTPQISEINPAWSPVDPIMFYPFLIIGLILGLITGV 176 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 ++GLP L+ RGDYLAI TL E+ + I N G + + L+R Sbjct: 177 LLGLPVLRLRGDYLAIVTLGFGEVIRVIANNLDRPVNVTNGSQGIRDIERPPLVLVDLVR 236 Query: 169 FFRFPSSFV-IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + +Y++F YY++L + L+ ++ L+ + I AW IR+++ A + Sbjct: 237 NLGVVADDNRLYQLFFYYLVLIILLLTVIVVARLKNSRIGRAWEAIREDEVAAVAQGIPR 296 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + KL AFA+ ++F G+ G FA+ + I+P F +I ++ +VILGGM S+ Sbjct: 297 VRMKLLAFAIGASFAGVMGVVFASKQLFINPPTFDLLRSINILVMVILGGMGSIPGAMLG 356 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFN------MRHTTLMVIALFLVILMRSHSLLR 341 I+ + + L ++++ R L Sbjct: 357 AIIVTMLDLQILPRTAAVIREAQAAGLPIPRQFDPTQYQRLFFGLLLVIMMIFRPEGLWP 416 Query: 342 LRTP 345 Sbjct: 417 DERR 420 >gi|104783848|ref|YP_610346.1| branched-chain amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95112835|emb|CAK17563.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 433 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 99/329 (30%), Positives = 159/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 106 IIPALIVIAIVFPVFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V + R + FF F + + +F+Y VL + Sbjct: 226 WLSFTGGPNGMPVPSPTFMGLEFGRRAKDGGVPIHEFFGFEYNANLKFVFIYAVLFLVVL 285 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R + AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 286 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFASY 345 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + L+++ R L+R Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419 >gi|294628781|ref|ZP_06707341.1| branched chain amino acid transport permease [Streptomyces sp. e14] gi|292832114|gb|EFF90463.1| branched chain amino acid transport permease [Streptomyces sp. e14] Length = 612 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 136/347 (39%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 ++V + T++ ++G+ ILI+ A GL+IVVG GLL L V +G Sbjct: 268 ISVCGAFIAAALFPFTQTDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 327 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ W + V S G+++G P+L+ RGDYLAI TL E Sbjct: 328 AYAAALVSGSPNSPFDVHFPFWAAVLVGGAASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 387 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ + + G + L + ++++L Sbjct: 388 IFRITVNNLDGTSGPDLTNGSNGIASIPNLDVLGFDFGAQHDIGGFTIGRFANYFFLMLI 447 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + I AW IR+++ A ++ KL AFAV ++ G+AG Sbjct: 448 ITAVVVLVFRRSGNSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGASLAGLAGTVQ 507 Query: 250 AASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A ++P+ + F+ + +++ V+LGGM +++ A+L + + Y Sbjct: 508 AHVTYTVTPEQYLFAGAVPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLGDY 567 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +AL L++ R ++ R Sbjct: 568 ---------------QLFAFGLALILLMRFRPEGIVPNRRRQLEFHE 599 >gi|325527882|gb|EGD05139.1| putative branched-chain amino acid ABC transporter ATP-binding membrane protein [Burkholderia sp. TJI49] Length = 595 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 124/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + +V L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 11 FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 70 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 71 IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 130 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + + +Y+++ + + Sbjct: 131 LFGNLEML-GKYDGINGIPALSLFGLALDT--------------GRSLYFLIWAVVLAAI 175 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 176 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 235 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 236 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 292 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 293 ----EIIVFGVLMVLLLQYARQGVWP 314 >gi|163852782|ref|YP_001640825.1| ABC transporter related [Methylobacterium extorquens PA1] gi|163664387|gb|ABY31754.1| ABC transporter related [Methylobacterium extorquens PA1] Length = 593 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 83/331 (25%), Positives = 137/331 (41%), Gaps = 30/331 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 K L L + + + T +Y + + LIY + A GL+++VG GL+SL Sbjct: 1 MKALYTLGFALLAAILVVVPLTSGNEYELRLFMLFLIYGVIAVGLNVLVGLTGLVSLGQA 60 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+GAY+ IL R+ L + L +A+++G G + PS++ RG YLA+ T+ Sbjct: 61 GLFALGAYTGAILAIRFNLDLVLASIGAAVVAGLFGAALAYPSVRVRGVYLAVVTIAFGL 120 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I +N+ I+W+ +T G G+ G + Y VL Sbjct: 121 IVENVAIEWQSLTGGTTGLSGIPGPNLFGYPLSG---------------YAFYAVLAITL 165 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 FL+ L+ + A + ++ A SL + AFAV++ G+AG+F+A Sbjct: 166 FLATLATHNLKHSGYGRAMLAVAQSETAARSLGIGATRIRTLAFAVAAMTAGIAGSFYAF 225 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ISPD+F FS+++ + +VILGG S IL + E+ Sbjct: 226 LNAYISPDIFTFSDSVRFLLMVILGGAASTFGPVVGAFILTYLPEVLQRFAE-------- 277 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L V+ +L Sbjct: 278 -------WQKFAYGALLLAVMFGLPGGILGT 301 >gi|296157548|ref|ZP_06840383.1| ABC transporter related protein [Burkholderia sp. Ch1-1] gi|295892320|gb|EFG72103.1| ABC transporter related protein [Burkholderia sp. Ch1-1] Length = 594 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 FFWLFLVVLFALPVLPQPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ L ++YG+S W + V +++ +++GL +++ G +L + T+ Sbjct: 69 GIGAYATAYLTTQYGISPWFALIVGVVVTALIALMLGLVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + GI L G + S +YY++ + + Sbjct: 129 YLFGNLEML-GKYDGINGIPVLNVFGINLESGRH--------------IYYLIWVVVLGA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 VISVQNLLNSRPGRAIRALRGGGMMAEAMGVNTAWMRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG++ + AIL + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + I + L++ + Sbjct: 292 -----EVIVFGILMVLLLQYARQGVWP 313 >gi|257482382|ref|ZP_05636423.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009787|gb|EGH89843.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 437 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R + +F F + + +F+Y VL + Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGIPIHEYFGFDYNPDLKFLFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|291286813|ref|YP_003503629.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809] gi|290883973|gb|ADD67673.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809] Length = 401 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 99/330 (30%), Positives = 159/330 (48%), Gaps = 26/330 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L VV+ LL L + + Y ++ L+YV+ GL+IVVG GLL L V YA Sbjct: 85 ILRIVVFSLLAILCIFPFVTDAYQINILTVALMYVVLGLGLNIVVGLAGLLDLGFVAFYA 144 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+Y +L +GLS WLL+PV ++ G+++G P L+ RGDYLAI TL EI + Sbjct: 145 VGAYTYALLNHYFGLSFWLLLPVGGLMGAVFGVLLGFPVLRLRGDYLAIVTLGFGEIIRL 204 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L W + G +GI DR F S IF+Y++++ + Sbjct: 205 VLENWNDFSMGPSGIANIDRPSFF-----------GIDFSLEQSTIFIYFLMVLFTLFTI 253 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L+ + I AW +R+++ A ++ KL AFA+ + + G+ G FAA Sbjct: 254 FFVNRLQNSRIGRAWLALREDEIACQAMGVGRTRTKLMAFALGATWAGLMGVVFAAKTTF 313 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I+P F F E+ I++S+V+LGGM S+ + I+I + E + Y Sbjct: 314 INPASFTFLESAIILSVVVLGGMGSIPGVILGALIMILLPEYLRAFSEY----------- 362 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + A+ ++++ R L+ Sbjct: 363 ----RMLVFGGAMVVMMVFRPQGLVSNFRR 388 >gi|302185464|ref|ZP_07262137.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642] Length = 437 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V + R + +F F + + IF+Y VL + Sbjct: 224 WLSFTGGPNGVPVPAPTFLGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|283853361|ref|ZP_06370608.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] gi|283571229|gb|EFC19242.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] Length = 407 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 89/307 (28%), Positives = 150/307 (48%), Gaps = 17/307 (5%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + +Y + I +L+Y+ GL++VVG GLL L + Y +GAY+Y +L +GL W+ Sbjct: 106 TNRYAQDVAINVLVYICLGLGLNVVVGLCGLLDLGYIAFYGVGAYTYALLSIHFGLPFWV 165 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 +PV A+ + G I+G P+L+ RGDYLAI TL EI + +L W +T G G+ Sbjct: 166 CLPVCALFAAVAGCIIGYPTLRMRGDYLAIVTLGFGEIVRIVLNNWMALTGGPNGLLGIK 225 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + F F + ++YYV+L + + + + + I A+ IR Sbjct: 226 APGVYVPSFTDGS--FSFEYLLLRKLEYLYYVILALAVFTIVAVYRINYSRIGRAFEAIR 283 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 +++ A + KL A+A+ + F G+AGAFF+A +SP+ F F E+ +V+++V+ Sbjct: 284 EDETAAELMGVDTFRFKLLAYALGAVFGGLAGAFFSARMRFVSPESFTFIESAMVLAMVV 343 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 LGGM S+ + L+ + E+ G Y A+ ++L+ Sbjct: 344 LGGMGSIPGVILGALALVALPEVFRGFELY---------------RMLAFGGAMAFMMLV 388 Query: 335 RSHSLLR 341 R L Sbjct: 389 RPAGLWP 395 >gi|299131697|ref|ZP_07024892.1| inner-membrane translocator [Afipia sp. 1NLS2] gi|298591834|gb|EFI52034.1| inner-membrane translocator [Afipia sp. 1NLS2] Length = 426 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 118/337 (35%), Positives = 177/337 (52%), Gaps = 19/337 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ + + FL Q+Y+ +GI ++ YVM WGL+IVVG GLL L V YA+ Sbjct: 90 LVVPLLLVFAFLVPVIFYKQRYMLDLGILVMTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 149 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAYSY +L + +GLS W+ +P++ +++ GM++G P L+ RGDYLAI TL EI + + Sbjct: 150 GAYSYALLSTTFGLSFWICLPLAGILAAFWGMLLGFPVLRLRGDYLAIVTLAFGEIIRLV 209 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 L+ W+ +T G GI R G + L P S + ++Y++L + Sbjct: 210 LLNWQHVTGGPNGISGIPRPSLFGIPLTAGPNGLAAHLGIPFSPTHRLVLLFYIILALAL 269 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L+ + L LRR I AW +R+++ A SL KL+AFA + F G AGAFFA Sbjct: 270 LTNWVTLRLRRLPIGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAGAFFATR 329 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ISP+ F F E+ +V++IV+LGGM S + ++ LIG EL G + Sbjct: 330 QGFISPESFSFQESALVLAIVVLGGMGSQLGVVLSSLALIGGFELFRGFEQF-------- 381 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 A+ L+++ R L+ R PS FL Sbjct: 382 -------RMLAFGGAMVLLMIWRPRGLIAHREPSLFL 411 >gi|91785747|ref|YP_560953.1| branched chain amino acid ABC transporter ATPase/inner membrane protein [Burkholderia xenovorans LB400] gi|91689701|gb|ABE32901.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Burkholderia xenovorans LB400] Length = 594 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 FFWLFLVVLFALPVLPQPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ L ++YG+S W + V +++ +++GL +++ G +L + T+ Sbjct: 69 GIGAYATAYLTTQYGISPWFALIVGVVVTALIALMLGLVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + GI L G + S +YY++ + + Sbjct: 129 YLFGNLEML-GKYDGINGIPVLNVFGINLESGRH--------------IYYLIWVVVLGA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 VISVQNLLNSRPGRAIRALRGGGMMAEAMGVNTAWMRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG++ + AIL + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EVIVFGVLMVLLLQYARQGVWP 313 >gi|300703314|ref|YP_003744916.1| leucine/isoleucine/valine ABC transporter subunit inner-membrane ABC translocator, membrane component [Ralstonia solanacearum CFBP2957] gi|299070977|emb|CBJ42286.1| leucine/isoleucine/valine transporter subunit ; Inner-membrane translocator, membrane component of ABC superfamily [Ralstonia solanacearum CFBP2957] Length = 378 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 LL + F+ Y + L+Y+M A GL+IVVG GLL L + Y Sbjct: 16 AALLGFFILAIFAPFIVGAVGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 75 Query: 75 AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY +LGS + L IW +IP+ A ++ G+++G P+LK R Sbjct: 76 AVGAYMMALLGSPHLTNQFEWIHQLFPNGLHLLIWWVIPLGAGLAALFGILLGAPTLKLR 135 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + + N G + + + + Sbjct: 136 GDYLAIVTLGFGEIIRIFMNNLDRPVNITNGPKGVNLIEPVKLFGFDFSKRHEIFGIHFE 195 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+ + + ++ L L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 196 PVHMYYYLFVILAMGIITVCLRLQNSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAMG 255 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 ++F G++GA FA+ + +SP+ F E+I +++IV+LGGM + + +L+G EL Sbjct: 256 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGVLLVGFQELL 315 Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + N L + L +A+ V+L R L Sbjct: 316 RALAEPVQNKLFGHVIVEAEVLRQLLFGLAMVGVMLYRPAGLWP 359 >gi|291295710|ref|YP_003507108.1| ABC transporter-like protein [Meiothermus ruber DSM 1279] gi|290470669|gb|ADD28088.1| ABC transporter related protein [Meiothermus ruber DSM 1279] Length = 590 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 121/328 (36%), Gaps = 21/328 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + +V LL L + ++G I + A GL ++ G G+ S + Sbjct: 8 ITLVAVGLLLLLPLLLPPSSFYLTVGNYIAFGALVALGLYLLTGLSGMTSFGQAAFMGLA 67 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L GL+ WL +P+ + + +++G + + +G YL ++T+ ++ Sbjct: 68 AYTSALLTIGQGLNPWLTLPLGVLAAVVGAVVLGGITARLKGHYLPLSTIAWCMALYIVM 127 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 W +T G G+ + G ++ +Y+ L A Sbjct: 128 GSWIELTGGHTGLRGIPSVSVFGWSLNDSR--------------SYFYLAWFFVLLGAWT 173 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L + I A R + + A S KL F +S+ + G+AG + + I+ Sbjct: 174 AWNLTNSRIGRAMRASKGDAIAAASFGVNPAVLKLQVFVLSAIYAGVAGWLYVHYQKFIN 233 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F +I + + GG+ S+ + + ++ G+ E+ G+ F Sbjct: 234 PTPFSLDASIKYLIAAVAGGVGSIPGVILGSGLVTGLEEVLKGLLPRIFGR-------TG 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345 + L L+++ L Sbjct: 287 NYEIIAYGLILVLILMFAPKGLWPFLER 314 >gi|330951502|gb|EGH51762.1| inner-membrane translocator [Pseudomonas syringae Cit 7] Length = 437 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V + R + +F F + + IF+Y VL + Sbjct: 224 WLSFTGGPNGVPVPAPTFLGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYAVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|295678146|ref|YP_003606670.1| ABC transporter related protein [Burkholderia sp. CCGE1002] gi|295437989|gb|ADG17159.1| ABC transporter related protein [Burkholderia sp. CCGE1002] Length = 594 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 FFWLFLVVLFALPVLPQPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ L + +G+S WL + +++ +++GL +++ G +L + T+ Sbjct: 69 GIGAYATAYLTTNFGVSPWLALIAGVILTALIALMLGLVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L LG + S +YY++ + + Sbjct: 129 YLFGNLDML-GKYDGINGIPVLNVLGINLESGRH--------------IYYLIWLVVLGA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 VVSVQNLLNSRPGRAIRALRGGGLMAEAMGVNTGWMRVVIFVYAAVLASVSGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG++ + AIL + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + I + L++ + Sbjct: 292 -----EVIVFGIIMVLLLQYARQGVWP 313 >gi|85860151|ref|YP_462353.1| branched-chain amino acid transport system permease [Syntrophus aciditrophicus SB] gi|85723242|gb|ABC78185.1| branched-chain amino acid transport system permease protein [Syntrophus aciditrophicus SB] Length = 400 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 93/332 (28%), Positives = 157/332 (47%), Gaps = 26/332 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ LF + Y S+ L+Y++ GL+IVVG GLL L V YA+GAY Sbjct: 92 ILVSGGLFALVFPFLFSSYQTSIMTTALLYIVLGLGLNIVVGLAGLLDLGYVAFYAVGAY 151 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L +G+ W +P+ A+++ G+I+G P L+ RGDYLAI TL EI + IL Sbjct: 152 TYALLNVHFGVGFWTALPIGALLAACFGVILGFPVLRLRGDYLAIVTLGFGEIIRLILEN 211 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W + G +GI R F S I++YY+++ +C + ++ Sbjct: 212 WNAFSFGPSGISNIPRPGFF-----------GIELSLQNATIYIYYLMIALCLFTILVVN 260 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L+ + I AW +R+++ A ++ KL+AFA+ + + GMAG AA I+P Sbjct: 261 RLQHSRIGRAWIALREDELACEAMGVDKTRTKLTAFALGATWAGMAGVILAAKTTFINPA 320 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F F E+ +++SIV+LGGM S+ + +L+ + E Y Sbjct: 321 SFTFLESAMILSIVVLGGMGSIPGVILGALLLMLLPEYLRVFKDY--------------- 365 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + L+++ R ++ + + Sbjct: 366 RMLLFGATMVLMMVFRPQGMITAVRRTYQYKE 397 >gi|169837102|ref|ZP_02870290.1| permease of ABC transporter for branched-chain amino acids [candidate division TM7 single-cell isolate TM7a] Length = 373 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 76/344 (22%), Positives = 135/344 (39%), Gaps = 48/344 (13%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K LL +V+ +L Y + I ILIYV+F+ L+I VG +G L+L Sbjct: 47 KNYVATFLLIIVFYFVLSFTFNPNDPFSYTKGIYINILIYVLFSVSLNITVGLMGQLNLG 106 Query: 70 CVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 AIG YS + L + L+ +++ G ++G +L+ RGDYL Sbjct: 107 QAGFIAIGGYSAAFISKILASYNLPPFLQLILVSLFGGLVAAVFGFLVGGSTLRLRGDYL 166 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + I+ + G G+ L T ++ + + Sbjct: 167 AIITLAFGEIVKYIIQNLDFL-GGATGLSNIPPLLSFSNTYFIVVISIVIIAMAMT---- 221 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 + +IR+++ A ++ + KL FA S+ F Sbjct: 222 ---------------------SRKGKEILSIREDEIAAENIGIGLNRVKLYGFAFSAFFA 260 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+ G+ FA + ++PD F F +I ++ +V+LGG+ S++ A IL + E + Sbjct: 261 GVGGSLFAHNVGILTPDKFGFLFSIEILVMVVLGGLGSITGAIVAAVILTLLNEKLRDV- 319 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + I L +++ R + + + Sbjct: 320 --------------SQFRYLVYAIILISLMIFRPKGIFGTKEFT 349 >gi|17547158|ref|NP_520560.1| amino-acid transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429460|emb|CAD16146.1| probable amino-acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 378 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 LL + FL Y + L+Y+M A GL+IVVG GLL L + Y Sbjct: 16 AALLGFFVLAIFAPFLVGAVGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 75 Query: 75 AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY +LGS + L IW +IP+ A ++ G+++G P+LK R Sbjct: 76 AVGAYMMALLGSPHLTNQFEWIHQLFPNGLHLLIWWVIPLGAGLAALFGILLGAPTLKLR 135 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + + N G + + + + Sbjct: 136 GDYLAIVTLGFGEIIRIFMNNLDRPVNITNGPKGVNLIEPVKLFGFDFSKRHDIFGIHFE 195 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+ + + ++ L L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 196 PVHMYYYLFVLLAMGIITVCLRLQNSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAMG 255 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 ++F G++GA FA+ + +SP+ F E+I +++IV+LGGM + + +L+G EL Sbjct: 256 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGILLVGFQELL 315 Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + N L + L +A+ V+L R L Sbjct: 316 RALAEPIQNKLFGHVIVEAEVLRQLLFGLAMVGVMLYRPAGLWP 359 >gi|170694307|ref|ZP_02885461.1| ABC transporter related [Burkholderia graminis C4D1M] gi|170140730|gb|EDT08904.1| ABC transporter related [Burkholderia graminis C4D1M] Length = 594 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 124/335 (37%), Gaps = 24/335 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R+ K L V++ L + +Y ++ I +Y + A GL ++ G G+ Sbjct: 3 RIMKNKFFWLFLVVLFALPVLPR--PIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMT 60 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S IGAY+ L +R+G+S WL + +++ +I+GL +++ G +L + T Sbjct: 61 SFGQAAFVGIGAYATAYLTTRFGVSPWLALIAGVLVTALIALILGLVTMRLSGHFLPLGT 120 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + + + GI L G + S +YY+ Sbjct: 121 IAWGLSLFYLFGNLEML-GKYDGINGIPVLNVFGIDLESGRH--------------IYYL 165 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + + + L + A R +R ++ + ++ F ++ ++G Sbjct: 166 IWLVVLGAVVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTAWMRVVIFVYAAVLASVSG 225 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A + ++P F + I + + ++GG++ + AIL + + + Sbjct: 226 FLYAHLQRAVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLL 285 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F + I + L++ + Sbjct: 286 GENGNF-------EVIVFGILMVLLLQYARQGVWP 313 >gi|33597866|ref|NP_885509.1| putative branched-chain amino acid transport system protein [Bordetella parapertussis 12822] gi|33602769|ref|NP_890329.1| putative branched-chain amino acid transport system protein [Bordetella bronchiseptica RB50] gi|33574295|emb|CAE38628.1| putative branched-chain amino acid transport system protein [Bordetella parapertussis] gi|33577211|emb|CAE35768.1| putative branched-chain amino acid transport system protein [Bordetella bronchiseptica RB50] Length = 612 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 125/325 (38%), Gaps = 22/325 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + + ++L + + ++ + I + M A GL ++ G GL S + Sbjct: 4 FLLIAFIVVLAGLPLLSATPEFWITQLNYIGLAAMVALGLVLLTGVGGLTSFGQAAFVGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L ++Y +S WL +PV +++ ++GL +L+ G YL + T+ + Sbjct: 64 GAYTTALLTTQYDISPWLALPVGLLVTAVVAFLLGLITLRLSGHYLPLGTIAWGLSLYYL 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + GI + + G ++ S +YY++ L+ Sbjct: 124 FGNLDWL-GKHDGIAGIEPISLFGWSLASGRH--------------IYYLIWVFVLLALW 168 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L + A R ++ S+ K+ F ++ ++G +A + + Sbjct: 169 ATRNLLDSRPGRAIRALKSGAGMAESMGVNTGIYKIVIFVWAALLACLSGWLYAHMQRAV 228 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F + I + + ++GG + +A+++G+ + + ++ F Sbjct: 229 SPSPFGLNYGIEYLFMAVVGGAGHVWGALLGSAVILGIKDQLQNILPKLIDTNANF---- 284 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+ S+ L Sbjct: 285 ---ELIFFGVLMILVLQYASNGLWP 306 >gi|83746665|ref|ZP_00943714.1| LivM [Ralstonia solanacearum UW551] gi|207721435|ref|YP_002251876.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] gi|207742585|ref|YP_002258977.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83726618|gb|EAP73747.1| LivM [Ralstonia solanacearum UW551] gi|206586594|emb|CAQ17181.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206593979|emb|CAQ60906.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 378 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 LL + F+ Y + L+Y+M A GL+IVVG GLL L + Y Sbjct: 16 AALLGFFILAIFAPFIVGAVGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 75 Query: 75 AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY +LGS + L IW +IP+ A ++ G+++G P+LK R Sbjct: 76 AVGAYMMALLGSPHLTNQFEWIHQLFPNGLHLLIWWVIPLGAGLAALFGILLGAPTLKLR 135 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + + N G + + + + Sbjct: 136 GDYLAIVTLGFGEIIRIFMNNLDRPLNITNGPKGVNLIEPVKLFGFDFSKRHEIFGIHFE 195 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+ + + ++ L L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 196 PVHMYYYLFVILAMGIITVCLRLQNSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAMG 255 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 ++F G++GA FA+ + +SP+ F E+I +++IV+LGGM + + +L+G EL Sbjct: 256 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGVLLVGFQELL 315 Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + N L + L +A+ V+L R L Sbjct: 316 RALAEPVQNKLFGHVIVEAEVLRQLLFGLAMVGVMLYRPAGLWP 359 >gi|302336889|ref|YP_003802095.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293] gi|301634074|gb|ADK79501.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293] Length = 419 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 90/319 (28%), Positives = 154/319 (48%), Gaps = 26/319 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 S Y ++ L+ VM GL+IVVG G+L L + YA+GAY+Y +L +G++ Sbjct: 117 PFISSMYQTNIISTALLSVMLGMGLNIVVGLGGMLHLGYIAFYAVGAYTYALLNYHFGVN 176 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 W+ +P+ + S G+++G+P L+ +GDYLAI TL EI + +L W + G +GI Sbjct: 177 FWVALPLGGLFSMIFGILLGIPVLRLKGDYLAIVTLGFGEIIRIVLENWNEFSFGPSGIA 236 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 R F S IF Y++L+ + + I+ L+ + + AW Sbjct: 237 NIPRPGFF-----------GVKLSIQHASIFTYFILIALVIFTIFIVSRLKNSRLGRAWE 285 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R++ A ++ I AK++AFA+ + + G+AG FA+ I+P F E+I+V+ Sbjct: 286 AMREDDIACEAMGVDITKAKMTAFALGAFWAGLAGVVFASKTTFINPASFTMWESIVVLC 345 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 IV+LGGM SL + +++ + E + Y L L ++ Sbjct: 346 IVVLGGMGSLGGVVIGALLIVLLPEYLRAFSEY---------------RMLLFGAVLVVM 390 Query: 332 ILMRSHSLLRLRTPSNFLE 350 ++ R L++ R E Sbjct: 391 MIFRPEGLIQARRHVFTFE 409 >gi|313500847|gb|ADR62213.1| Inner-membrane translocator [Pseudomonas putida BIRD-1] Length = 433 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 106 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ +F R + FF F + + +F+Y VL + Sbjct: 226 WLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFIVVL 285 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R + AW +R+++ A S+ + KLSAF + ++ G+AG FFA Sbjct: 286 TVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 345 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + L+++ R L+R Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419 >gi|186477787|ref|YP_001859257.1| ABC transporter-like protein [Burkholderia phymatum STM815] gi|184194246|gb|ACC72211.1| ABC transporter related [Burkholderia phymatum STM815] Length = 594 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L +V L + + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 LFWLFLVVMFALPVLPQPIRVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L ++ G+S WL + +++ +++G +++ G +L + T+ Sbjct: 69 GVGAYTTAYLTTQLGVSPWLALIAGVVLTALIALLLGAVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + GI L LG + S +YY++ + + Sbjct: 129 FLFGNMEML-GKYDGINGIPVLNVLGVNLESGRH--------------IYYLIWIVVLGA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 VVSVQNLLNSRPGRAIRALRGGGLMAEAMGVNTAWMRVVIFVYAAVLAAISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG+ + AIL + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVAHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + I + L++ + Sbjct: 292 -----EIIVFGILMVLLLQYARQGVWP 313 >gi|300313405|ref|YP_003777497.1| branched-chain amino acid ABC transporter ATP-binding protein/permease [Herbaspirillum seropedicae SmR1] gi|300076190|gb|ADJ65589.1| ABC-type branched-chain amino acid transport system, composite ATP-binding/permease components protein [Herbaspirillum seropedicae SmR1] Length = 596 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 113/335 (33%), Gaps = 22/335 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + L L + ++ + +Y + A GL ++ G GL+S + Sbjct: 9 AALPALFFAIVLALPQLGLPPFWVTLLSYVGLYAIVALGLVLLTGVAGLISFGQAAFVGM 68 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ L +++GLS W+ + ++ ++G +++ G YL ++T+ + Sbjct: 69 GAYTTAYLTTQFGLSPWIGLLAGIALTACSAFLIGSLTMRISGHYLPLSTIAWGLSLYYL 128 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + GI + + MY ++ + L+ Sbjct: 129 FGNLEML-GKHDGINGIPVITIGSVEFGN--------------GASMYLLIWVVLILALV 173 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + A R +R ++ K+ F ++ G++G +A + + Sbjct: 174 SVVNFLDSRAGRAVRALRFGTVMPEAMGVDTARLKIVIFVYAAVLAGISGWLYAHLQQAV 233 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P F I + +V++GG ++ +L + + F Sbjct: 234 NPTPFGLKYGIDYLLMVVVGGAGHVAGAILGAGLLAVLSNFLQEWLPGVLGTGGNF---- 289 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + IAL + + + L R Sbjct: 290 ---EAIVFGIALVIFLQFANEGLWPRLQARFGRRR 321 >gi|206558426|ref|YP_002229186.1| putative branched-chain amino acid ABC transporter ATP-binding membrane protein [Burkholderia cenocepacia J2315] gi|198034463|emb|CAR50328.1| putative branched-chain amino acid ABC transporter ATP-binding membrane protein [Burkholderia cenocepacia J2315] Length = 594 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + +V L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 70 IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELES--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|299065964|emb|CBJ37145.1| leucine/isoleucine/valine transporter subunit ; Inner-membrane translocator, membrane component of ABC superfamily [Ralstonia solanacearum CMR15] Length = 378 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 LL + FL Y + L+Y+M A GL+IVVG GLL L + Y Sbjct: 16 AALLGFFVLAIFAPFLVGAVGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 75 Query: 75 AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY +LGS + L IW ++P+ A ++ G+++G P+LK R Sbjct: 76 AVGAYMMGLLGSPHLSNQFEWIHQLFPHGLHLLIWWVVPLGAGLAALFGILLGAPTLKLR 135 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + + N G + + + + Sbjct: 136 GDYLAIVTLGFGEIIRIFMNNLDRPLNITNGPKGINLIEPVKLFGFDFSKRHDIFGIHFE 195 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+ + + ++ L L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 196 PVHMYYYLFVLLAMGIITVCLRLQNSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAMG 255 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 ++F G++GA FA+ + +SP+ F E+I +++IV+LGGM + + +L+G EL Sbjct: 256 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGILLVGFQELL 315 Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + N L + L +A+ V+L R L Sbjct: 316 RALAEPIQNKLFGHVIVEAEVLRQLLFGLAMVGVMLYRPAGLWP 359 >gi|307731472|ref|YP_003908696.1| ABC transporter-like protein [Burkholderia sp. CCGE1003] gi|307586007|gb|ADN59405.1| ABC transporter related protein [Burkholderia sp. CCGE1003] Length = 594 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 FFWLFLVVLFALPVLPQPIHVPEYWVTLLNYIGLYAIVAIGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ L +R+G+S W + +++ +++GL +++ G +L + T+ Sbjct: 69 GIGAYATAYLTTRFGVSPWFALIAGVLLTALIALVLGLVTMRLSGHFLPLGTIAWGLSLF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + GI L G + S +YY++ + + Sbjct: 129 YLFGNLEML-GKYDGINGIPVLNVFGIDLESGRH--------------IYYLIWLVVLGA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 VVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTAWMRVVIFVYAAVLASVSGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG++ + AIL + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + I + L++ + Sbjct: 292 -----EVIVFGILMVLLLQYARQGVWP 313 >gi|73542412|ref|YP_296932.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72119825|gb|AAZ62088.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 385 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 92/345 (26%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + LL + L F T Y + L+Y+M A GL+IVVG GLL L + Sbjct: 22 LAALLGFLVIALCAPFFVQTLGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAF 81 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY +LGS + LS+W ++P++ +++ G+++G P+LK Sbjct: 82 YAVGAYMMALLGSPHLANQFEWIHQLFPHGLHLSMWWVLPLAVLVAATFGVLLGAPTLKL 141 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + + Sbjct: 142 RGDYLAIVTLGFGEIIRIFMNNLDRPLNITNGPKGITAVDPVHIFGFDFSKTHEIFGLKF 201 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+L+ + + + L L+ + I A+ IR+++ A ++ KL AFA+ Sbjct: 202 SPVFMYYYLLVFLVIVIVFVCLRLQNSRIGRAFVAIREDEIAAKAMGINTRNIKLLAFAM 261 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G +GA F A + +SP+ F E+I +++IV+LGGM + + +L+G EL Sbjct: 262 GASFGGASGAVFGAFQGFVSPESFTLWESIYILAIVVLGGMGHIPGVILGGILLVGFQEL 321 Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L +AL V+L R + Sbjct: 322 LRVVAEPIQTGIFGHVIVDAEVLRQLLFGLALVGVMLYRPAGIWP 366 >gi|206576552|ref|YP_002237859.1| hydrophobic amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|206565610|gb|ACI07386.1| hydrophobic amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] Length = 428 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 161/339 (47%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 101 IMPLLVVLAIAFPFLASKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P+ A+++ G ++G P L+ GDYLAI TL EI + +L Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V F R + FF + + IF+Y VL + Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRARDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + L R I AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL G + Y Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + ++++ R L+R L + Sbjct: 393 -------RVLLFGVLMVVMMIWRPRGLVRTSRSGVTLRK 424 >gi|161523271|ref|YP_001578283.1| ABC transporter-like protein [Burkholderia multivorans ATCC 17616] gi|189351956|ref|YP_001947584.1| branched-chain amino acid transporter ATP-binding protein [Burkholderia multivorans ATCC 17616] gi|160340700|gb|ABX13786.1| ABC transporter related [Burkholderia multivorans ATCC 17616] gi|189335978|dbj|BAG45048.1| branched-chain amino acid transport system ATP-binding protein [Burkholderia multivorans ATCC 17616] Length = 594 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 121/326 (37%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +V L + GA +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWAFLVVLFALPVLPGALHVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+ L +RYG+S WL + V ++ +++G +++ G +L + T+ Sbjct: 70 VGAYATAFLTTRYGVSPWLALIVGVALTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLEVL-GKYDGINGIPALSLFGLELDS--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|323527854|ref|YP_004230007.1| inner-membrane translocator [Burkholderia sp. CCGE1001] gi|323384856|gb|ADX56947.1| inner-membrane translocator [Burkholderia sp. CCGE1001] Length = 594 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 124/335 (37%), Gaps = 24/335 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R+ K L V++ L + +Y ++ I +Y + A GL ++ G G+ Sbjct: 3 RIMKNRFFWLFLVVLFALPVLP--QPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMT 60 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S IGAY+ L +R+G+S WL + +++ +I+GL +++ G +L + T Sbjct: 61 SFGQAAFVGIGAYATAYLTTRFGVSPWLALIAGVLVTALIALILGLVTMRLSGHFLPLGT 120 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + + + GI L G + S +YY+ Sbjct: 121 IAWGLSLFYLFGNLEML-GKYDGINGIPVLNVFGIDLESGRH--------------IYYL 165 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + + + L + A R +R ++ + ++ F ++ ++G Sbjct: 166 IWLVVMGAVVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTAWMRVVIFVYAAVLASVSG 225 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A + ++P F + I + + ++GG++ + AIL + + + Sbjct: 226 FLYAHLQRAVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLL 285 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F + I + L++ + Sbjct: 286 GENGNF-------EVIVFGILMVLLLQYARQGVWP 313 >gi|170749306|ref|YP_001755566.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] gi|170655828|gb|ACB24883.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] Length = 852 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 120/337 (35%), Gaps = 41/337 (12%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 LR ++ +V P L + ++I+ + GL+I+VG GL Sbjct: 19 LRESRQLWAALAALIVLPFALDAIGLTLIT-------ATDVVIFALAVLGLNILVGWTGL 71 Query: 66 LSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 S + IGAY+ I + + L + + I+G + G L+ RG Y ++ Sbjct: 72 TSFGHGAWFGIGAYAVAILQTRLFPGDMALPLLGALAITGCAALAAGGLILRRRGVYFSL 131 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL + + I +W +T G+ GI R + + Y Sbjct: 132 LTLAFTAMLYAIAFRWTDLTGGENGIGNLHR------------------WAALQEPGAYY 173 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + G+ F + RR+ + IR+N++ L KL+AF +S+ G+ Sbjct: 174 AAVSGIAFAVLIALWRFRRSPMGTVLVAIRENEQRAGFLGYATNRYKLAAFVISATITGL 233 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA A S S D + + ++++V++GGM S A I E Sbjct: 234 AGALAAYSHRFTSADPISIAFSGELLAMVVIGGMRSFLGPALGALFYILFREFLSIYTAD 293 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + I+ L+ Sbjct: 294 W---------------LLYFGLLFVAFIVFSPDGLVG 315 >gi|119869096|ref|YP_939048.1| inner-membrane translocator [Mycobacterium sp. KMS] gi|119695185|gb|ABL92258.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Mycobacterium sp. KMS] Length = 426 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 146/354 (41%), Gaps = 23/354 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 R+ K+ + + L +F Q + + A GL++VVG GL Sbjct: 56 TRVQKWVVGAVVFLAIGLLPIFTPSWLDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGL 115 Query: 66 LSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMG 111 L L V YA+GAY+ +L S + +P++ ++ G+I+G Sbjct: 116 LDLGYVGFYAVGAYTVALLTSPSSPWNQAGPGGWFTTDWAWLACVPLAMAVTALAGLILG 175 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 P+L+ RGDYLAI TL EI + + +TNG G+ + + F R Sbjct: 176 TPTLRLRGDYLAIVTLGFGEIIRLLADNLSDVTNGPRGLNEVEYPRVGESERLPEGVFSR 235 Query: 172 FPSSF-VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 S+ Y + +++ L + ++ L R+ + AW +R+++ A + Sbjct: 236 ANSTGEANYGTWWFWLGLLLIVGILLLVGNLERSRVGRAWVAVREDEDAAEVMGVNTFRF 295 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 KL AF + +A G++GA +A ++P F +++ + V+LGG + + I Sbjct: 296 KLWAFVIGAAIGGLSGALYAGQVQYVAPPTFNIINSMLFLCAVVLGGQGNKLGVIFGAFI 355 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ + G++F + +AL ++++ R L R Sbjct: 356 IVYLPNRLLGVHF--------LGINLGDLKYLFFGLALVVLMIFRPQGLFPARQ 401 >gi|316932907|ref|YP_004107889.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315600621|gb|ADU43156.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 442 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 116/338 (34%), Positives = 181/338 (53%), Gaps = 19/338 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++A + L Q+YI +GI +L YVM WGL+IVVG GLL L V YA+ Sbjct: 105 IVAPALLVFTVLVPVLFYDQRYILDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 164 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAYSY +L + +GLS W+ +P++ +++ G+I+G P L+ RGDYLAI TL EI + + Sbjct: 165 GAYSYALLATNFGLSFWICLPLAGILAAFWGVILGFPVLRLRGDYLAIVTLAFGEIIRLV 224 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIR----FFRFPSSFVIYEIFMYYVLLGMCF 192 +I W+ +T G GI R G + P S +F++Y++L + Sbjct: 225 IINWQTLTGGPNGISGIPRPTVFGIPLTPGENGLAAMLGIPFSPSQRLVFLFYLILILAL 284 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 ++ + LRR I AW +R+++ A +L KL+AFA+ + F G AGAFFA Sbjct: 285 ITNWATIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFAIGAMFGGFAGAFFATR 344 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ISP+ F F E+ +V++IV+LGGM S +A A LIG EL G++ + Sbjct: 345 QGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAVTLIGGFELFRGLDQF-------- 396 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + +A+ L+++ R L+ R P+ +L+ Sbjct: 397 -------RMLVFGMAMVLLMIWRPRGLIGHRAPTVYLQ 427 >gi|144898541|emb|CAM75405.1| ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum gryphiswaldense MSR-1] Length = 422 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 114/350 (32%), Positives = 169/350 (48%), Gaps = 23/350 (6%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 ++ K + + + + +LIYVM WGL+IVVG GLL L Sbjct: 84 RFPKARLYVGWGLAGFAIALPFLPFADRSLVDKATLVLIYVMLGWGLNIVVGLAGLLDLG 143 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 V YA+GAYSY +L ++ LS WL +P++ + + G+ +G P L+ RGDYLAI TL Sbjct: 144 FVAFYAVGAYSYALLATKLDLSFWLCLPLAGLFAAGFGVALGFPVLRLRGDYLAIVTLGF 203 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEI 181 EI + IL W+ TNG AGI R G T + +F S I Sbjct: 204 GEIIRVILQNWQDFTNGPAGISAIPRPTLFGLTFTANAPAGKTTFADYFGLDFSGDHRVI 263 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 F+Y+V+L + + L +RR I AW +R+++ A SL KLSAFA + F Sbjct: 264 FLYFVILALALFTNLFTLRIRRLPIGRAWEALREDEIACRSLGLNPTTIKLSAFATGAMF 323 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G AG+FFA + ISP+ F F E+ ++++IV+LGGM S + A +L+G+ E + Sbjct: 324 AGFAGSFFATRQGFISPESFTFIESAVILAIVVLGGMGSQIGVVLAALLLVGLPEWFREL 383 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 Y A+ L++L + LL R P+ L + Sbjct: 384 QQY---------------RMLAFGGAMVLIMLWKPSGLLSHRAPTIRLGK 418 >gi|115523668|ref|YP_780579.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115517615|gb|ABJ05599.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 444 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 116/334 (34%), Positives = 179/334 (53%), Gaps = 19/334 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + FL Q+Y+ +GI +L YVM WGL+IVVG GLL L V YA+GAYS Sbjct: 111 LLLGFTFLVPVIFYEQRYLLDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYS 170 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L + + LS W+ +P++ +++ G+++G P L+ RGDYLAI TL EI + ++I W Sbjct: 171 YALLATNFDLSFWVCLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLVIINW 230 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIR----FFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + +T G G+ R G + S +F++Y++L + L+ Sbjct: 231 QSLTGGPNGVSGIPRPTLFGIPLTPGDDGLAALLGIEFSPTHRIVFLFYLILALALLTNW 290 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + LRR I AW +R+++ A +L I KLSAF++ + F G AGAFFA + I Sbjct: 291 VTIRLRRLPIGRAWEAMREDEVACRALGINITTTKLSAFSIGAMFGGFAGAFFATRQGFI 350 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP+ F F E+ +V++IV+LGGM S +A A LIG EL G++ Y Sbjct: 351 SPESFTFQESALVLAIVVLGGMGSQLGVALAALTLIGGFELFRGLDQY------------ 398 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + A+ L+++ R L+ R+P+ FLE Sbjct: 399 ---RMLVFGFAMVLLMIWRPRGLIGHRSPTVFLE 429 >gi|319779523|ref|YP_004130436.1| Branched-chain amino acid transport system permease protein LivM [Taylorella equigenitalis MCE9] gi|317109547|gb|ADU92293.1| Branched-chain amino acid transport system permease protein LivM [Taylorella equigenitalis MCE9] Length = 410 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 23/329 (6%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 F+ + + +LIYVM GL+IVVG GLL L V YA+GAY+Y +L + Sbjct: 95 FVWPFFGNRVSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAYTYALLFYYF 154 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 S W +P++ + + G ++G P L+ RGDYLAI TL EI + +LI IT G Sbjct: 155 DWSFWQALPLAGVFAAGFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLINLVSITRGPD 214 Query: 149 GIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 GI + G + ++ + + + I++Y + L + L+ + Sbjct: 215 GISSIPKPSVFGYPMLRRAPEGQQTFHQLMGWKFDSMDPVIYLYLLALVLAILTLLLSNR 274 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R + AW +R+++ A SL KLSAF + + G AGAFFAA + ++P+ Sbjct: 275 LLRMPVGRAWEALREDEIACKSLGLNPTKIKLSAFTLGAICAGFAGAFFAARQGLVNPEA 334 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F E+ ++++IV+LGGM S + A IL + EL Y Sbjct: 335 FTFMESAMILAIVVLGGMGSQIGVIFAAIILTVLPELARQFAEY---------------R 379 Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + + + L+++ R L ++ P + Sbjct: 380 MLIFGLVMVLMMIWRPQGLFPVKRPHVEV 408 >gi|221214303|ref|ZP_03587275.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia multivorans CGD1] gi|221165958|gb|EED98432.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia multivorans CGD1] Length = 594 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 121/326 (37%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +V L + GA +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWAFLVVLFALPVLPGALHVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+ L +RYG+S WL + V ++ +++G +++ G +L + T+ Sbjct: 70 VGAYATAFLTTRYGVSPWLALIVGVALTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLEVL-GKYDGINGIPALSLFGLELDS--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|254239430|ref|ZP_04932752.1| branched-chain amino acid transport protein BraE [Pseudomonas aeruginosa 2192] gi|126192808|gb|EAZ56871.1| branched-chain amino acid transport protein BraE [Pseudomonas aeruginosa 2192] Length = 417 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 100/328 (30%), Positives = 160/328 (48%), Gaps = 24/328 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + + ILIYVM GL+IVVG GLL L V YA+GAY+Y +L G Sbjct: 105 WPFFASRGAVDIATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYAVGAYTYALLAEYAGF 164 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ M++ G ++G P L+ RGDYLAI TL EI + +L IT G GI Sbjct: 165 GFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTEITGGPNGI 224 Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + G T ++ FF + I +Y V L + L+ +I L Sbjct: 225 GSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVVALLLVLLALFVINRLM 284 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R I AW +R+++ A +L KLSAF + ++F G AG+FFAA + ++P+ F Sbjct: 285 RMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGSFFAARQGLVTPESFT 344 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ ++++IV+LGGM S + A +++ + E+ FN Sbjct: 345 FIESAMILAIVVLGGMGSQLGVILAAVVMVLLQEM----------------RGFNEYRML 388 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + ++++ R LL ++ P L+ Sbjct: 389 IFGLTMIVMMIWRPQGLLPMQRPHLELK 416 >gi|221202193|ref|ZP_03575228.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia multivorans CGD2M] gi|221208746|ref|ZP_03581745.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia multivorans CGD2] gi|221171378|gb|EEE03826.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia multivorans CGD2] gi|221177987|gb|EEE10399.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia multivorans CGD2M] Length = 594 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 121/326 (37%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +V L + GA +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWAFLVVLFALPVLPGALHVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+ L +RYG+S WL + V ++ +++G +++ G +L + T+ Sbjct: 70 VGAYATAFLTTRYGVSPWLALIVGVALTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLEVL-GKYDGINGIPALSLFGLELDS--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|39934861|ref|NP_947137.1| putative branched-chain amino acid transport system ATP-binding protein [Rhodopseudomonas palustris CGA009] gi|39648711|emb|CAE27233.1| putative branched-chain amino acid transport system ATP-binding protein [Rhodopseudomonas palustris CGA009] Length = 590 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 66/334 (19%), Positives = 126/334 (37%), Gaps = 27/334 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + ++ IL AV+ L L + + + I + + A GL ++ G GL S Sbjct: 1 MPRWLPILLFAAVMTALPLIPGIPP-----FWIVLLDNIGLAALVAMGLVLLTGVGGLTS 55 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 GAY+ + + YG+S WL +P S +++G +++GL +++ G YL + T+ Sbjct: 56 FGQAAFCGFGAYTTAYITTVYGISPWLALPASLVVAGIAAVLLGLMTVRLSGHYLPLGTI 115 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + K + GI L + +Y+V+ Sbjct: 116 AWGIALYYLFSKLDFL-GRNDGISRVPPLSIGPIDMYDPHT--------------IYFVI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 M +SA + + L + A R +R A + AKL F ++ G++G Sbjct: 161 WAMVLISAVLTMNLLDSRTGRAIRALRRGHVAAEAFGVQTARAKLLVFIYAAVLAGLSGW 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + ++P F I + I ++GG + AI+I + E+ G F Sbjct: 221 LYAHFQRNVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIILKEVLQGYLPLLFG 280 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + I L +++ + + Sbjct: 281 GQ-------GQLEIIVFGILLVVLLQLAPGGVWP 307 >gi|172059158|ref|YP_001806810.1| ABC transporter-like protein [Burkholderia ambifaria MC40-6] gi|171991675|gb|ACB62594.1| ABC transporter related [Burkholderia ambifaria MC40-6] Length = 594 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 124/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + +V L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 70 IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELGS--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVDTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + + F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGAEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|170699460|ref|ZP_02890503.1| ABC transporter related [Burkholderia ambifaria IOP40-10] gi|170135609|gb|EDT03894.1| ABC transporter related [Burkholderia ambifaria IOP40-10] Length = 594 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + +V L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 70 IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELGS--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|119898283|ref|YP_933496.1| ABC transporter ATP-binding/permease [Azoarcus sp. BH72] gi|119670696|emb|CAL94609.1| ABC transporter ATP-binding/permease protein [Azoarcus sp. BH72] Length = 619 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 109/332 (32%), Gaps = 31/332 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L L + + ++ I +Y M A GL ++ G GL S +GA Sbjct: 28 LVLGVFLALLAVAPLVLPPFYVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGLGA 87 Query: 79 YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 Y+ + + G S WL + V + +++G +LK G YL + T+ Sbjct: 88 YTTALLCTATELPGWLAWAGGSPWLALVVGLAFTAVVAVVLGSLTLKLSGHYLPLGTIAW 147 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + + G G+ + G + +YY++ Sbjct: 148 GISLYFLFGTMESL-GGHTGLTGIPPISIFGWVLDQGEE--------------IYYLIWV 192 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L + A R ++ ++ +++ F +++ +G + Sbjct: 193 FLLAAVFTTQNLLDSREGRAIRALKGGMVMAEAMGVDTSRSRMIIFVIAALHACASGWLY 252 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + ++P F I + + ++GG + ++ + + + F Sbjct: 253 AHMQRFVNPTPFGLHIGIEYLFMAVVGGAGHVWGALVGAGVITVLKQWLQDLLPRLFGQS 312 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F + + + +V+ L Sbjct: 313 GNF-------EVIVFGLMMVIVLQRARDGLWP 337 >gi|194290588|ref|YP_002006495.1| high-affinity branched-chain amino acid transport protein, ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] gi|193224423|emb|CAQ70434.1| high-affinity branched-chain amino acid transport protein, ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 385 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 94/345 (27%), Positives = 155/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + L+ + L F+ T Y + L+Y+M A GL+IVVG GLL L + Sbjct: 22 LAALIGFLVVALCAPFIVQTLGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAF 81 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY +LGS + LS+W ++P++ +++ G+++G P+LK Sbjct: 82 YAVGAYMMALLGSPHLANQFEWIQQLFPTGIHLSMWFVLPLAILVAATFGVLLGAPTLKL 141 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + + Sbjct: 142 RGDYLAIVTLGFGEIIRIFMNNLDRPVNITNGPKGITAVDPVHIFGFDFSKSHEIFGLKF 201 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+L+ + + + L L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 202 SPVFMYYYLLVFLVIVIVFVCLRLQTSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAM 261 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G +GA F A + +SP+ F E+I V++IV+LGGM + + +L+G EL Sbjct: 262 GASFGGASGAVFGAFQGFVSPESFTLWESIYVLAIVVLGGMGHIPGVILGGVLLVGFQEL 321 Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + L +AL V+L R + Sbjct: 322 LRVVAEPMQTGLFGHVIVDAEVLRQLLFGLALVGVMLYRPAGIWP 366 >gi|152988081|ref|YP_001349658.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas aeruginosa PA7] gi|150963239|gb|ABR85264.1| branched-chain amino acid transport protein BraE [Pseudomonas aeruginosa PA7] Length = 417 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 99/328 (30%), Positives = 160/328 (48%), Gaps = 24/328 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + + ILIYVM GL+IVVG GLL L V YA+GAY+Y +L G Sbjct: 105 WPFFASRGAVDIATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYAVGAYTYALLAEYAGF 164 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ M++ G ++G P L+ RGDYLAI TL EI + +L IT G GI Sbjct: 165 GFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTEITGGPNGI 224 Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + G T ++ FF + I +Y + L + L+ +I L Sbjct: 225 GSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVIALLLVLLALFVINRLM 284 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R I AW +R+++ A +L KLSAF + ++F G AG+FFAA + ++P+ F Sbjct: 285 RMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGSFFAARQGLVTPESFT 344 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ ++++IV+LGGM S + A +++ + E+ FN Sbjct: 345 FIESAMILAIVVLGGMGSQLGVILAAVVMVLLQEM----------------RGFNEYRML 388 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + ++++ R LL ++ P L+ Sbjct: 389 IFGLTMIVMMIWRPQGLLPMQRPHLELK 416 >gi|300717444|ref|YP_003742247.1| High-affinity branched-chain amino acid ABC transporter permease [Erwinia billingiae Eb661] gi|299063280|emb|CAX60400.1| High-affinity branched-chain amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 429 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 101/332 (30%), Positives = 157/332 (47%), Gaps = 22/332 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ LL+ L + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 102 IIPLLLVLGILFPFIATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 161 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P+ A+++ G ++G P L+ GDYLAI TL EI + +L Sbjct: 162 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLTN 221 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R + F + IF+Y VL+ + Sbjct: 222 WVSFTGGPNGVSVPSPTFFGLEFGRRAKDGGVPIHEFLNITYDPNLKFIFIYTVLILVVL 281 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R I AW +R+++ A ++ + KLSAF + ++ G+AG FFA Sbjct: 282 LVLFIKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMMGASTAGIAGVFFATY 341 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Y Sbjct: 342 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVAPELLRSFAEY-------- 393 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L + + L+++ R L+R Sbjct: 394 -------RVLLFGVLMVLMMIWRPRGLVRTSR 418 >gi|15596269|ref|NP_249763.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas aeruginosa PAO1] gi|107100517|ref|ZP_01364435.1| hypothetical protein PaerPA_01001542 [Pseudomonas aeruginosa PACS2] gi|254234208|ref|ZP_04927531.1| branched-chain amino acid transport protein BraE [Pseudomonas aeruginosa C3719] gi|296390564|ref|ZP_06880039.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas aeruginosa PAb1] gi|313106026|ref|ZP_07792285.1| branched-chain amino acid transport protein BraE [Pseudomonas aeruginosa 39016] gi|115123|sp|P21628|BRAE_PSEAE RecName: Full=High-affinity branched-chain amino acid transport system permease protein BraE gi|9946988|gb|AAG04461.1|AE004539_3 branched-chain amino acid transport protein BraE [Pseudomonas aeruginosa PAO1] gi|216865|dbj|BAA14256.1| integral membrane protein [Pseudomonas aeruginosa] gi|126166139|gb|EAZ51650.1| branched-chain amino acid transport protein BraE [Pseudomonas aeruginosa C3719] gi|310878787|gb|EFQ37381.1| branched-chain amino acid transport protein BraE [Pseudomonas aeruginosa 39016] Length = 417 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 100/328 (30%), Positives = 160/328 (48%), Gaps = 24/328 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + + ILIYVM GL+IVVG GLL L V YA+GAY+Y +L G Sbjct: 105 WPFFASRGAVDIATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYAVGAYTYALLAEYAGF 164 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ M++ G ++G P L+ RGDYLAI TL EI + +L IT G GI Sbjct: 165 GFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTEITGGPNGI 224 Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + G T ++ FF + I +Y V L + L+ +I L Sbjct: 225 GSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVVALLLVLLALFVINRLM 284 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R I AW +R+++ A +L KLSAF + ++F G AG+FFAA + ++P+ F Sbjct: 285 RMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGSFFAARQGLVTPESFT 344 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ ++++IV+LGGM S + A +++ + E+ FN Sbjct: 345 FIESAMILAIVVLGGMGSQLGVILAAVVMVLLQEM----------------RGFNEYRML 388 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + ++++ R LL ++ P L+ Sbjct: 389 IFGLTMIVMMIWRPQGLLPMQRPHLELK 416 >gi|171315840|ref|ZP_02905071.1| ABC transporter related [Burkholderia ambifaria MEX-5] gi|171099029|gb|EDT43814.1| ABC transporter related [Burkholderia ambifaria MEX-5] Length = 594 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + +V L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 70 IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELGS--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFIYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|126435612|ref|YP_001071303.1| inner-membrane translocator [Mycobacterium sp. JLS] gi|126235412|gb|ABN98812.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Mycobacterium sp. JLS] Length = 390 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 146/354 (41%), Gaps = 23/354 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 R+ K+ + + L +F Q + + A GL++VVG GL Sbjct: 20 TRVQKWVVGAVVFLAIGLLPIFTPSWLDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGL 79 Query: 66 LSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMG 111 L L V YA+GAY+ +L S + +P++ ++ G+I+G Sbjct: 80 LDLGYVGFYAVGAYTVALLTSPSSPWNQAGPGGWFTTDWAWLACVPLAMAVTALAGLILG 139 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 P+L+ RGDYLAI TL EI + + +TNG G+ + + F R Sbjct: 140 TPTLRLRGDYLAIVTLGFGEIIRLLADNLSDVTNGPRGLNEVEYPRVGESERLPEGVFSR 199 Query: 172 FPSSF-VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 S+ Y + +++ L + ++ L R+ + AW +R+++ A + Sbjct: 200 ANSTGEANYGTWWFWLGLLLIVGILLLVGNLERSRVGRAWVAVREDEDAAEVMGVNTFRF 259 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 KL AF + +A G++GA +A ++P F +++ + V+LGG + + I Sbjct: 260 KLWAFVIGAAIGGLSGALYAGQVQYVAPPTFNIINSMLFLCAVVLGGQGNKLGVIFGAFI 319 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ + G++F + +AL ++++ R L R Sbjct: 320 IVYLPNRLLGVHF--------LGINLGDLKYLFFGLALVVLMIFRPQGLFPARQ 365 >gi|115350138|ref|YP_771977.1| ABC transporter-like protein [Burkholderia ambifaria AMMD] gi|115280126|gb|ABI85643.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia ambifaria AMMD] Length = 594 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + +V L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 70 IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELGS--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|332284427|ref|YP_004416338.1| leucine/isoleucine/valine transporter permease subunit [Pusillimonas sp. T7-7] gi|330428380|gb|AEC19714.1| leucine/isoleucine/valine transporter permease subunit [Pusillimonas sp. T7-7] Length = 408 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 98/339 (28%), Positives = 158/339 (46%), Gaps = 23/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +++ L+ + + + + +LIYVM GL+IVVG GLL L V YA+GAY Sbjct: 84 LIFLLIAIALVWPFTTGRAQVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 143 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L G W +P + +S G ++G P L+ RGDYLAI TL EI + +LI Sbjct: 144 TYALLYHWAGWGFWEALPFAGGMSALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLIN 203 Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 +T G GI + G + + + IF+Y + L + Sbjct: 204 LYTLTGGPDGISGVPKPTVFGFPMARRAPEGVTTFHELVGWNYDTQDVIIFLYLMALCLA 263 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ + + R I AW +R+++ A SL KLSAF + + F G GAFFAA Sbjct: 264 LITLFVSNRVIRMPIGRAWEALREDEIACRSLGLNPTRIKLSAFTMGAMFAGFGGAFFAA 323 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P+ F F E+ ++++IV+LGGM S + A IL V E+ Y Sbjct: 324 RQGLVNPESFTFIESALILAIVVLGGMGSQVGVILAAIILTVVPEIAREFAEY------- 376 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + L+++ R LL ++ P L+ Sbjct: 377 --------RMLIFGLVMVLMMMWRPQGLLPVKRPQVELK 407 >gi|288934788|ref|YP_003438847.1| inner-membrane translocator [Klebsiella variicola At-22] gi|288889497|gb|ADC57815.1| inner-membrane translocator [Klebsiella variicola At-22] Length = 428 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 160/339 (47%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 101 IMPLLAVLAIAFPFLASKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P+ A+++ G ++G P L+ GDYLAI TL EI + +L Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V F R + FF + + IF+Y VL + Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRARDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + L R I AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL G + Y Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + ++++ R L+R L + Sbjct: 393 -------RVLLFGVLMVVMMIWRPRGLVRTSRSGVALRK 424 >gi|146283319|ref|YP_001173472.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas stutzeri A1501] gi|145571524|gb|ABP80630.1| branched-chain amino acid transport protein BraE [Pseudomonas stutzeri A1501] gi|327481712|gb|AEA85022.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas stutzeri DSM 4166] Length = 418 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 168/340 (49%), Gaps = 23/340 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L+L + + + ILIYVM GL+IVVG GLL L V YA+GAY Sbjct: 94 IILALVLVALVWPFYGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L YG+ W +P++ ++ G ++G P L+ RGDYLAI TL EI + +L Sbjct: 154 TYALLSHYYGVGFWTALPIAGAMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRN 213 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVIYEIFMYYVLLGMC 191 IT G GI D+ F G + + +F + V IF+Y + L + Sbjct: 214 MTSITGGPNGISGIDKPTFFGLSFDRRAAEGMQTFHEYFGIAYNSVNKVIFLYLIALLLV 273 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +I L R I AW +R+++ A +L KLSAF + + F G AG+FFAA Sbjct: 274 LLTLFVINRLLRMPIGRAWEALREDEIACRALGMNPTVIKLSAFTLGATFAGFAGSFFAA 333 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + +SP+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 334 RQGLVSPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ R LL ++ P L++ Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHLELKQ 418 >gi|116049001|ref|YP_792197.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas aeruginosa UCBPP-PA14] gi|115584222|gb|ABJ10237.1| branched-chain amino acid transport protein BraE [Pseudomonas aeruginosa UCBPP-PA14] Length = 417 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 100/328 (30%), Positives = 160/328 (48%), Gaps = 24/328 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + + ILIYVM GL+IVVG GLL L V YA+GAY+Y +L G Sbjct: 105 WPFFASRGAVDIATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYAVGAYTYALLAEYAGF 164 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ M++ G ++G P L+ RGDYLAI TL EI + +L IT G GI Sbjct: 165 GFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTEITGGPNGI 224 Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + G T ++ FF + I +Y V L + L+ +I L Sbjct: 225 GSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVVALLLVLLALFVINRLM 284 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R I AW +R+++ A +L KLSAF + ++F G AG+FFAA + ++P+ F Sbjct: 285 RMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGSFFAARQGLVTPESFT 344 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ ++++IV+LGGM S + A +++ + E+ FN Sbjct: 345 FIESAMILAIVVLGGMGSQLGVILAAVVMVLLQEM----------------RGFNEYRML 388 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + ++++ R LL ++ P L+ Sbjct: 389 IFGLTMIVMMIWRPQGLLPMQRPHLELK 416 >gi|229588105|ref|YP_002870224.1| high-affinity branched-chain amino acid transporter permease [Pseudomonas fluorescens SBW25] gi|229359971|emb|CAY46825.1| high-affinity branched-chain amino acid transport system permease protein [Pseudomonas fluorescens SBW25] Length = 425 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 97/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 98 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 158 GLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217 Query: 140 WKPITNGKAGIYVADRLYFLGTT-------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V + FF + I +F+Y VL + Sbjct: 218 WLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVL 277 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R + AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 278 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 337 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 338 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 389 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + ++++ R L+R Sbjct: 390 -------RVLLFGVLMVVMMIWRPRGLIR 411 >gi|56415461|ref|YP_152536.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364391|ref|YP_002144028.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56129718|gb|AAV79224.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095868|emb|CAR61442.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 421 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 103/341 (30%), Positives = 159/341 (46%), Gaps = 28/341 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLMALLVIAVAWPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVV---------------- 374 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 FN ++ + L+++ R LL + P L+ Sbjct: 375 ---SRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 412 >gi|218294978|ref|ZP_03495832.1| inner-membrane translocator [Thermus aquaticus Y51MC23] gi|218244886|gb|EED11410.1| inner-membrane translocator [Thermus aquaticus Y51MC23] Length = 442 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 17/340 (5%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR- 87 A + ++ +GIQI IY A GL++VVG GLL L +A+GAY++ I GS Sbjct: 101 VPLAGFANTFVFELGIQIGIYAAMALGLNVVVGMAGLLDLGYAAFFAVGAYTWAIFGSEQ 160 Query: 88 -----------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G ++L + ++ + + G+++GLP+L+ RGDYLAI TL + E+ + + Sbjct: 161 AKNFMKGNFPLPGEYMYLFMLIAIVTTAITGLLIGLPALRLRGDYLAIVTLGLGEVVRIL 220 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFMYYVLLGMCFLS 194 N G + + Y++F Y ++L M L Sbjct: 221 ANNLDHPINFTNGPQGITPVQRPPIDWFRHLMASLGIPLDQTTDYQLFFYLLVLLMIGLV 280 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + L + AW IR+++ A S+ ++ KL AF +AF G+ G +AA R Sbjct: 281 VLVNVNLANSRFGRAWVAIREDEIAARSMGIPLLPTKLLAFMTGAAFSGVMGVIYAAQRT 340 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV-VELCCGMNFYYFNSLLKFD 313 +SP+ F +I ++++VILGGM S+ A L + +++ + + SL + Sbjct: 341 FVSPESFTLLASITILAMVILGGMGSIPGAILGAAALSILNLDVLKTFSEFVRTSLPQIP 400 Query: 314 CSFNMRHT--TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + ++ I L L+++ R L+ R +E Sbjct: 401 SQVDPAKYERLVLGIILVLMMIYRPTGLIPERRHRAEMEE 440 >gi|221213699|ref|ZP_03586673.1| inner-membrane translocator [Burkholderia multivorans CGD1] gi|221166488|gb|EED98960.1| inner-membrane translocator [Burkholderia multivorans CGD1] Length = 389 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + ++ + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 LVVGVLTAAFVIAAPLIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + LS ++++P++ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLTSPHLANQFQWFAQMWPGGMHLSYFIIVPIAMALAALFGVLLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPQGITGIDPVHVGGFNLSQTHTLFGFQF 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L + L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA FA + +SP+ F F E+++V++ V+LGGM + + +L E Sbjct: 263 GASFGGLSGAMFAGFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEF 322 Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ + L +A+ L++L RS L Sbjct: 323 LRSTMGPLQHAIFGHQIIDTEVIRQLLYGLAMVLIMLYRSEGLWP 367 >gi|261344958|ref|ZP_05972602.1| high-affinity branched-chain amino acid transport protein [Providencia rustigianii DSM 4541] gi|282567101|gb|EFB72636.1| high-affinity branched-chain amino acid transport protein [Providencia rustigianii DSM 4541] Length = 423 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 104/340 (30%), Positives = 164/340 (48%), Gaps = 23/340 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + + LIYVM GL++VVG GLL L YAIGA Sbjct: 91 IIGILIIVAAIIWPFIVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L Y W +P++ + + G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFGLLNHYYDFGFWESLPIAGITAALAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190 IT G GI + F G + FF + IF+Y+V L + Sbjct: 211 NNTEITGGPNGISQLPKPTFFGLEFSRTAKDGWDTFHNFFGLDYNPGDRIIFLYFVALLL 270 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L+ +I L R + AW +R+++ A SL + KL+AF +S+AF G AGA FA Sbjct: 271 VVLTFIVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGALFA 330 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + ISP+ F F+E+ V++IV+LGGM S + + A IL+ E+ +N Y Sbjct: 331 ARQGFISPESFTFAESAFVLAIVVLGGMGSQTSVILAAIILVVSREMMRDLNEY------ 384 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ L+ Sbjct: 385 ---------SMLLLGALMVLMMIWRPQGLLPMQRRHMKLK 415 >gi|85715590|ref|ZP_01046570.1| ABC-type branched-chain amino acid transport system permease component [Nitrobacter sp. Nb-311A] gi|85697529|gb|EAQ35406.1| ABC-type branched-chain amino acid transport system permease component [Nitrobacter sp. Nb-311A] Length = 474 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 118/360 (32%), Positives = 179/360 (49%), Gaps = 40/360 (11%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL L L +Q+Y+ +GI +L YVM WGL+IVVG GLL L V YA+ Sbjct: 116 LLTPALLLFALLVPVIFYNQRYLLDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 175 Query: 77 GAYSYVILGS---------------------RYGLSIWLLIPVSAMISGACGMIMGLPSL 115 GAYSY +L + W+L+PVS +++ GM++G P L Sbjct: 176 GAYSYALLAQSGLPFPYFTEASPYIAINFLQPGPWAFWVLLPVSGLLAAFWGMLLGFPVL 235 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFR 171 + RGDYLAI TL EI + +++ W+ +T G GI R G + Sbjct: 236 RLRGDYLAIVTLAFGEIIRLVILNWQELTGGPNGISGIPRPTVFGIPLTPGEDGFAALIG 295 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 P S +F++Y++L + L+ + + LRR I AW +R+++ A +L I K Sbjct: 296 VPFSPTHRLVFLFYIILALALLTNWVTIRLRRLPIGRAWEAMREDEVACRALGINITTTK 355 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 LSAFA+ + F G AGAFFA + ISP+ F F E+ +V++IV+LGGM S +A A + Sbjct: 356 LSAFAIGAMFGGFAGAFFATRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAIAM 415 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 IG EL G++ + + + L+++ R L+ R P+ FL++ Sbjct: 416 IGGFELFRGLDQF---------------RMLVFGGVMVLLMIWRPRGLVSHRAPTVFLQK 460 >gi|120610556|ref|YP_970234.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120589020|gb|ABM32460.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax citrulli AAC00-1] Length = 358 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 160/340 (47%), Gaps = 18/340 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + LL+ + + ++ + L+YVM A GL+IVVG GLL L V YA+G Sbjct: 9 IIGAIALLVLPLILQSFGNAWV-RIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVG 67 Query: 78 AYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 AY + ++ S + S+WL+IP++A+++ CG ++G P+LK RGDY Sbjct: 68 AYLFGLMASPHLSDTFASFAAMFPNGLHTSLWLVIPLAALVAAVCGALLGAPTLKLRGDY 127 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI + L N G ++ + L R + Sbjct: 128 LAIVTLGFGEIIRIFLNNLDHPVNLTNGPKGIGQIDSVKVFGLDLGRRLELFGYDINSVT 187 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 YY+ L + S I L+ + I AW IR+++ A ++ KL AF + ++F Sbjct: 188 LYYYLFLVLVVFSVIICYRLQDSRIGRAWMAIREDEIAAKAMGINTRNLKLLAFGMGASF 247 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G++GA F A + +SP+ F E+++++++V+LGG+ + + +L + E+ + Sbjct: 248 GGVSGAMFGAFQGFVSPESFSLMESVMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYV 307 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 S+ + L+ +A+ +++L+R L Sbjct: 308 AGP-LQSMTDGRLDSAILRQLLIALAMIIIMLLRPRGLWP 346 >gi|121611609|ref|YP_999416.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gi|121556249|gb|ABM60398.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 840 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 120/333 (36%), Gaps = 37/333 (11%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + I + VV P LL S ++I+ + A GL+++VG GL S Sbjct: 6 RPLWIGAIALVVAPFLLQALGLTLTSS-------TDVVIFAIAAMGLNLLVGYTGLTSFG 58 Query: 70 CVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + IGAY+ + + L + ++ + +GL L+ RG Y ++ TL Sbjct: 59 HGAWFGIGAYAAALFQKHWLPGQFVLPLLLAVLFIACGSTAIGLLILRRRGVYFSLLTLA 118 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 +S + I +W +T G++G+ R + + ++ Sbjct: 119 LSALTFAIAFRWTALTGGESGLGGVVRPAIGPVNLDD--------------PLAYLVLVS 164 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + ++L + R+ + IR+N++ KL+ F +S+ G+AGA Sbjct: 165 LIGWGVLYLLLRVVRSPFGHTVVAIRENEQRATFQGYDTSRYKLTMFVLSATVTGLAGAL 224 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 S + + + ++++V++GGM S A + E Sbjct: 225 MVFHHRFASAEPTSVAFSGELLAMVVMGGMRSFLGPALGALFYMLFREFLS--------- 275 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +A IL L+ Sbjct: 276 ------IWTGNWLLWFGLAFVGFILFSPTGLVG 302 >gi|26991545|ref|NP_746970.1| inner-membrane translocator [Pseudomonas putida KT2440] gi|24986629|gb|AAN70434.1|AE016684_13 branched-chain amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 435 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 108 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 167 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 168 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 227 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ +F R + FF F + + +F+Y VL + Sbjct: 228 WLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVL 287 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R + AW +R+++ A S+ + KLSAF + ++ G+AG FFA Sbjct: 288 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 347 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 348 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 399 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + L+++ R L+R Sbjct: 400 -------RVLLFGVLMVLMMIWRPRGLIR 421 >gi|317401390|gb|EFV82024.1| inner-membrane translocator ABC transporter [Achromobacter xylosoxidans C54] Length = 829 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 74/334 (22%), Positives = 138/334 (41%), Gaps = 31/334 (9%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + LAV L + A Y + + + + GL++++G G +S Sbjct: 3 RRSAFSWPALAVYAVLAVVSLALAASVNGYYVFVIGNVALLALAGIGLNVLLGLTGQMSF 62 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 YAIGAY+ IL + G + WL PV+A ++G G+++ LP+L+ +G YLA+ T+ Sbjct: 63 GHAAFYAIGAYTVAILTGQAGWNFWLAWPVAAAVAGVFGLLLALPALRVQGPYLAMITIA 122 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 I ++ L++ +T G+ G+ + + + + + + Sbjct: 123 FGFIVEHTLVEGGDLTGGQNGLMGIAQPA----------------LGALGGDRGVAMLAI 166 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 F + + L R + A R ++D++ A S+ + K AF VS+A +G+AG Sbjct: 167 VTVFAALAGYALLARGSWGAAMRAVKDSETASESIGINPLVVKAVAFMVSAAVVGLAGGL 226 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 +A I+P F F ++I+ + V +GG SL+ ++ + EL + Y Sbjct: 227 YAPQAGMITPHNFNFMQSILFVLAVTIGGAGSLAGPLLGAVVVGLLPELLSSLEEY---- 282 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L +V+ L Sbjct: 283 -----------RLLFFGAFLLVVLWAAPEGAAGL 305 >gi|298293553|ref|YP_003695492.1| ABC transporter [Starkeya novella DSM 506] gi|296930064|gb|ADH90873.1| ABC transporter related protein [Starkeya novella DSM 506] Length = 595 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 72/327 (22%), Positives = 135/327 (41%), Gaps = 30/327 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L + + + +Y + + LIY + A GL++++G GL+SL + Sbjct: 4 LYALGFLALAAVLTAVPLASDNEYELRLFMLFLIYAIIAVGLNVLIGLAGLVSLGQAGLF 63 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+G+Y+ I +R G + +A+++G G+++ P+++ RG YLA+ T+ I + Sbjct: 64 ALGSYTGAITATRLGFDMVGAGLTAAVVAGLFGVLLAYPTVRVRGVYLAVVTIAFGLIVE 123 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 N+ I+W+ +T G GI G + Y VL FL Sbjct: 124 NVAIEWQSLTGGTTGITSIPSPNVFGLRLSG---------------YAYYGVLAVSLFLL 168 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L+ + + ++ A +L + AF +++ G+AG ++A Sbjct: 169 VAAAHNLKGSRYGRGLMAVAQSETAARALGLDPTALRTLAFVIAAVTAGVAGTYYAFLNS 228 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISPD+F F+++I + +VILGG S IL + E Sbjct: 229 YISPDIFTFTDSIRFLLMVILGGAASTFGPVIGAYILTYLPEYLQ--------------- 273 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 F + L +V+ + ++ Sbjct: 274 EFAVWQKFAYGALLLIVMFVLPRGIMG 300 >gi|264678300|ref|YP_003278207.1| High-affinity branched-chain amino acidtransporter permease livM [Comamonas testosteroni CNB-2] gi|299532143|ref|ZP_07045537.1| leucine/isoleucine/valine transporter permease subunit [Comamonas testosteroni S44] gi|262208813|gb|ACY32911.1| High-affinity branched-chain amino acidtransport system permease protein livM [Comamonas testosteroni CNB-2] gi|298719805|gb|EFI60768.1| leucine/isoleucine/valine transporter permease subunit [Comamonas testosteroni S44] Length = 412 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 99/341 (29%), Positives = 162/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V++ +L+ + + + +IYVM GL++VVG GLL L V YA+GA Sbjct: 86 VVIFVVLMMAASWPFFAGRNAVDIATLAMIYVMLGLGLNVVVGFAGLLDLGFVGFYAVGA 145 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L G + W +P++ S G ++G P L+ RGDYLAI TL EI + +L Sbjct: 146 YTYALLFHWAGWTFWEALPLAGAASALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLT 205 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 T G GI + LG + + +FF + + IF+Y + L Sbjct: 206 NLTSFTGGPDGISSIPKPTVLGLPMTRSPLTEDGTTFHQFFGMEFNSMHMVIFVYLMALL 265 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ I L R I AW +R+++ A SL + KLSAF + + F G GAFF Sbjct: 266 LAMVTLFISNRLIRMPIGRAWEALREDEIACRSLGLNPMKIKLSAFTLGAMFAGFGGAFF 325 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A IL + EL + Y Sbjct: 326 AARQGIVNPESFTFIESALILAIVVLGGMGSQLGVIVAAIILTVLPELAREFSEY----- 380 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + L+++ R LL ++ ++ Sbjct: 381 ----------RMLIFGLVMILMMVWRPQGLLPMKRHQVEVK 411 >gi|209515789|ref|ZP_03264652.1| ABC transporter related [Burkholderia sp. H160] gi|209503816|gb|EEA03809.1| ABC transporter related [Burkholderia sp. H160] Length = 594 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 118/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L ++ L + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 FFWLFLIVLFALPVLPHPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ L + +G+S WL + +++ +++GL +++ G +L + T+ Sbjct: 69 GIGAYATAYLTTNFGVSPWLALIAGVIVTALIALMVGLVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + S +YY++ + + Sbjct: 129 YLFGNLDML-GKYDGINGIPVLNVFGINLESGRH--------------IYYLIWVVVLGA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R S+ + ++ F ++ ++G +A + Sbjct: 174 VVSVQNLLNSRPGRAIRALRGGGLMAESMGVNTGWMRVVIFVYAAVLASVSGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG++ + AIL + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + I + L++ + Sbjct: 292 -----EVIVFGIVMVLLLQYARQGVWP 313 >gi|330807262|ref|YP_004351724.1| branched amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375370|gb|AEA66720.1| Putative branched amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 426 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ L++ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 99 VIPALIVIAIVFPFFANKYVLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 158 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + IL Sbjct: 159 GLALGYQYLGLGFWTVLPLAAIAAAMAGCILGFPVLRMHGDYLAIVTLGFGEIIRLILNN 218 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R FF + I +F+Y VL Sbjct: 219 WLSFTGGPNGMPVPSPTFFGLEFGRRAKDGGVPFHEFFGIDYNPNIKFLFIYIVLFITVL 278 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R + AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 279 LVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 338 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 339 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 390 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + L+++ R L+R Sbjct: 391 -------RVLLFGVLMVLMMIWRPRGLIR 412 >gi|192290387|ref|YP_001990992.1| ABC transporter [Rhodopseudomonas palustris TIE-1] gi|192284136|gb|ACF00517.1| ABC transporter related [Rhodopseudomonas palustris TIE-1] Length = 590 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 125/334 (37%), Gaps = 27/334 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + ++ IL AV+ L L + + + I + + A GL ++ G GL S Sbjct: 1 MPRWLPILLFAAVMTALPLIPGIPP-----FWIVLLDNIGLAALVAMGLVLLTGVGGLTS 55 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 GAY+ + + YGLS WL +P S ++G +++GL +++ G YL + T+ Sbjct: 56 FGQAAFCGFGAYTTAYITTVYGLSPWLALPASLAVAGIAAVLLGLMTVRLSGHYLPLGTI 115 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + K + GI L + +Y+V+ Sbjct: 116 AWGIALYYLFSKLDFL-GRNDGISRVPPLSIGPIDMYDPHT--------------IYFVI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 M +SA + + L + A R +R A + AKL F ++ G++G Sbjct: 161 WAMVLISAVLTMNLLDSRTGRAIRALRRGHVAAEAFGVQTARAKLLVFIYAAVLAGLSGW 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + ++P F I + I ++GG + AI+I + E+ G F Sbjct: 221 LYAHFQRNVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIILKEVLQGYLPLLFG 280 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + I L +++ + + Sbjct: 281 GQ-------GQLEIIVFGILLVVLLQLAPGGVWP 307 >gi|329903349|ref|ZP_08273442.1| ABC transporter-like protein [Oxalobacteraceae bacterium IMCC9480] gi|327548427|gb|EGF33105.1| ABC transporter-like protein [Oxalobacteraceae bacterium IMCC9480] Length = 656 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 72/307 (23%), Positives = 140/307 (45%), Gaps = 16/307 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++A V + + Y + ILIY + +GL IVVG G +SL + I Sbjct: 8 IVASVIGIAVLAAFPLVFHNPYYIHLAETILIYAILLFGLDIVVGYTGQVSLGHAALFGI 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G+Y+ +L ++GL I + P S ++ G ++ LP+L+ G YLA+ TL I Q + Sbjct: 68 GSYTTGVLYLKFGLPILIAAPASIAVTALFGALLALPALRVTGPYLAMVTLAFGTIIQIL 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + +T G G+ VA +F + E+ +Y++ + +S Sbjct: 128 INEMTFLTEGPLGLKVAKPEFFGHK----------------VNEVEFFYLVAVLMVVSLI 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + ++ + A++ +RD+ A + ++ K+ AF +S+ G+AG+ +A S + I Sbjct: 172 VVDRILKSHLGRAFQALRDSPIASDCMGVSVYRYKVYAFVISAGLAGLAGSLYAYSEEYI 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP+ + F I+ + VI+GG + S I++ + L + + + + Sbjct: 232 SPNTYNFELTILFLLAVIMGGRKTRSGALLGALIVVMLPSLLADIELFRKIATVAAVIGV 291 Query: 317 NMRHTTL 323 L Sbjct: 292 LSAGFML 298 >gi|241762746|ref|ZP_04760810.1| ABC transporter related protein [Acidovorax delafieldii 2AN] gi|241368165|gb|EER62357.1| ABC transporter related protein [Acidovorax delafieldii 2AN] Length = 601 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 127/324 (39%), Gaps = 31/324 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + L + + + + I + + A G++++VG G SL +A+G Sbjct: 9 IGLTLFVALAAVVPLSTDNDFYLRVLFLIGVNYIAAAGMNVLVGYTGQKSLGHAGLFAVG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L +R+G + W + +++G G+++ LP+L+ +G LA+ T+ + + I+ Sbjct: 69 AYTTALLTTRWGWNPWPAFAAAGVMAGLFGIVIALPALRVKGPALAMVTIGFGIVVEKIV 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W+ + G+ GIY L G S + +L + + Sbjct: 129 SEWQDVFAGQQGIYGVLPLSLGGAMFSSKHW---------------VWFVLLLGVTLHVM 173 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R A+ + + A S+ ++ K+ AF +S+ G+AGA A I+ Sbjct: 174 LRLLLRGRFGRAFMAVNTAEVAAESVGISVYRFKVLAFVISAVTCGLAGALIAQQNQYIN 233 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 D F+ ++ ++ +V+ GG S+ +L + + Sbjct: 234 SDFITFNLSVFILLMVLFGGP-SIYGPLLGAVVLTLLDAFLSR---------------WP 277 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 L + L Sbjct: 278 SVQHFTYGALLLFALYAMPDGLAG 301 >gi|116688115|ref|YP_833738.1| ABC transporter related [Burkholderia cenocepacia HI2424] gi|116646204|gb|ABK06845.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Burkholderia cenocepacia HI2424] Length = 594 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L +V L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWLFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 70 IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIVLES--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|297624109|ref|YP_003705543.1| ABC transporter-like protein [Truepera radiovictrix DSM 17093] gi|297165289|gb|ADI15000.1| ABC transporter related protein [Truepera radiovictrix DSM 17093] Length = 611 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 118/323 (36%), Gaps = 21/323 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V + L + + ++ + I VM GL ++ G + S + A Sbjct: 22 ALVALAAFVMALLPSWLPTFSLTLLNLVAIAVMVVLGLYLLTGLARMTSFGQAAFMGVAA 81 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL +R+G+S WL + +SG +I+G +++ +G YL +AT+ + Sbjct: 82 YATAILTTRHGVSPWLGLLAGLALSGGAALILGALTVRLKGHYLPLATIAWQMAITIVFG 141 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G GI G +RS YY+ G L+ Sbjct: 142 NLVAVTGGHTGISGVPPASVFGLELRSSG--------------AFYYLAWGFVALALVGA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ A R +R + A S +L F V+ G AG +A ++P Sbjct: 188 HNLTRSRTGRALRALRGDAVAAASFGVNPPLLRLQVFVVAGLLAGAAGWLYAHFLRFVNP 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F +I + + ++GG+ +L + ++ + + G+ Sbjct: 248 TPFSLDASITYLIMGVVGGIAALPGVLLGAGLITWLEDWLQGVLPLLLGR-------SGN 300 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + + L ++L L Sbjct: 301 YEVVALGLILVAILLFAPKGLWG 323 >gi|107024506|ref|YP_622833.1| ABC transporter related [Burkholderia cenocepacia AU 1054] gi|105894695|gb|ABF77860.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Burkholderia cenocepacia AU 1054] Length = 594 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L +V L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWLFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 70 IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIVLES--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|330899922|gb|EGH31341.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str. M301072PT] Length = 388 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 55 IIPMLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 114 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 115 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 174 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V + R + +F F + + IF+Y VL + Sbjct: 175 WLSFTGGPNGVPVPAPTFLGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYAVLFLVVL 234 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 235 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 294 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 295 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 346 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 347 -------RVLLFGILMVLMMIWRPRGLIR 368 >gi|167587943|ref|ZP_02380331.1| ABC transporter related protein [Burkholderia ubonensis Bu] Length = 594 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 121/326 (37%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L +V L + G + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWLFLVALFALPVLPGVLRVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +RYG+S WL + +++ +++G +++ G +L + T+ Sbjct: 70 IGAYATAYLTTRYGVSPWLGLIAGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGVVLDS--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG+ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVAHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|315504690|ref|YP_004083577.1| inner-membrane translocator [Micromonospora sp. L5] gi|315411309|gb|ADU09426.1| inner-membrane translocator [Micromonospora sp. L5] Length = 379 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 75/353 (21%), Positives = 148/353 (41%), Gaps = 29/353 (8%) Query: 10 KYDKILCLLAVVYPLLLFL-------FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62 ++ + + L+AV+ + + IYV+ A GL+IVVG Sbjct: 34 RWVRWVLLVAVIAFFYALPNKEFYQYLGPIPTPGANFTQVMFTVSIYVLLAVGLNIVVGF 93 Query: 63 LGLLSLNCVIAYAIGAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 GLL L +A+GAY+ +L S L++P++ ++ G+++G P+L+ Sbjct: 94 AGLLDLGYFGFFAVGAYTVAVLTSPSSDIKTLWPWLLVVPIAIALTMVSGVMLGTPTLRL 153 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLA+ TL +E+ + + + + + + P V Sbjct: 154 RGDYLALVTLGFAEMIRIAAVSSEFLKGQRGFNQIPHPPGQYA---------DGRPWFGV 204 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + Y+++L + L + L + + AW +IR+++ A + KL AFA Sbjct: 205 LDARPYYWLVLTLIILVVIGVRNLTHSRVGRAWISIREDEDAAQLMGVPTFKFKLWAFAS 264 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 +A G+AGA FA ++ ++ F+ +II+++ VI GG ++ ++ ++E Sbjct: 265 GAAIAGLAGALFAGKQNFVNSQNFELLNSIIILAAVIFGGSGNIVGAIVGGGLVAYMIER 324 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 G+ F + L ++++ R L+ R + + Sbjct: 325 FRGIEL--------FGVELYEYRFLFFGLVLVVMMIFRPQGLIPNRRRAAEFK 369 >gi|170731463|ref|YP_001763410.1| ABC transporter-like protein [Burkholderia cenocepacia MC0-3] gi|169814705|gb|ACA89288.1| ABC transporter related [Burkholderia cenocepacia MC0-3] Length = 594 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + +V L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 10 FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 70 IGAYATAFLTTRYGVSPWLALLVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + GI L G + S +Y+++ + + Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIVLES--------------GRSLYFLIWAVVLAAI 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F + I + + ++GG++ + AIL + + + S F Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313 >gi|254562545|ref|YP_003069640.1| branched chain amino acid ABC transporter ATPase/permease [Methylobacterium extorquens DM4] gi|254269823|emb|CAX25801.1| putative ABC transporter, ATPase and permease; putative branched-chain amino acid transporter [Methylobacterium extorquens DM4] Length = 593 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 83/331 (25%), Positives = 137/331 (41%), Gaps = 30/331 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 K L L + + + T +Y + + LIY + A GL+++VG GL+SL Sbjct: 1 MKALYTLGFALLATILVVVPLTSGNEYELRLFMLFLIYGVIAVGLNVLVGLTGLVSLGQA 60 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+GAY+ IL R+ L + L +A+++G G + PS++ RG YLA+ T+ Sbjct: 61 GLFALGAYTGAILAIRFNLDLVLASIGAAVVAGLFGAALAYPSVRVRGVYLAVVTIAFGL 120 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I +N+ I+W+ +T G G+ G + Y VL Sbjct: 121 IVENVAIEWQSLTGGTTGLSGIPGPNLFGYPLSG---------------YAFYAVLAITL 165 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 FL+ L+ + A + ++ A SL + AFAV++ G+AG+F+A Sbjct: 166 FLATLATHNLKHSGYGRAMLAVAQSETAARSLGIGATGIRTLAFAVAAMTAGIAGSFYAF 225 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ISPD+F FS+++ + +VILGG S IL + E+ Sbjct: 226 LNAYISPDIFTFSDSVRFLLMVILGGAASTFGPVVGAFILTYLPEVLQRFAE-------- 277 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L V+ +L Sbjct: 278 -------WQKFAYGALLLAVMFGLPGGILGT 301 >gi|188582997|ref|YP_001926442.1| ABC transporter [Methylobacterium populi BJ001] gi|179346495|gb|ACB81907.1| ABC transporter related [Methylobacterium populi BJ001] Length = 593 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 83/331 (25%), Positives = 137/331 (41%), Gaps = 30/331 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 K L L + + + T +Y + + LIY + A GL+++VG GL+SL Sbjct: 1 MKALYTLGFALLAAILVVVPLTSGNEYELRLFMLFLIYGVIAVGLNVLVGLTGLVSLGQA 60 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+GAY+ IL R+ L + L +A+++G G + PS++ RG YLA+ T+ Sbjct: 61 GLFALGAYTGAILAIRFNLDLVLASIGAAVVAGLFGAALAYPSVRVRGVYLAVVTIAFGL 120 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I +N+ I+W+ +T G G+ G + Y VL Sbjct: 121 IVENVAIEWQSLTGGTTGLSGIPGPNLFGYPLSG---------------YAFYAVLAVTL 165 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 FL+ L+ + A + ++ A SL + AFAV++ G+AG+F+A Sbjct: 166 FLATLAAHNLKHSGYGRAMLAVAQSETAARSLGIGATGIRTLAFAVAAMTAGIAGSFYAF 225 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ISPD+F FS+++ + +VILGG S IL + E+ Sbjct: 226 LNAYISPDIFTFSDSVRFLLMVILGGAASTFGPVVGAFILTYLPEVLQRFAE-------- 277 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L V+ +L Sbjct: 278 -------WQKFAYGALLLAVMFGLPGGILGT 301 >gi|312958684|ref|ZP_07773204.1| high-affinity branched-chain amino acid ABC transporter [Pseudomonas fluorescens WH6] gi|311287227|gb|EFQ65788.1| high-affinity branched-chain amino acid ABC transporter [Pseudomonas fluorescens WH6] Length = 425 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 97/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 98 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 158 GLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217 Query: 140 WKPITNGKAGIYVADRLYFLGTT-------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V + FF + I +F+Y VL + Sbjct: 218 WLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFMFIYIVLFLVVL 277 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R + AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 278 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 337 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 338 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 389 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + ++++ R L+R Sbjct: 390 -------RVLLFGVLMVVMMIWRPRGLIR 411 >gi|134294223|ref|YP_001117958.1| ABC transporter-like protein [Burkholderia vietnamiensis G4] gi|134137380|gb|ABO53123.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia vietnamiensis G4] Length = 594 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 128/334 (38%), Gaps = 24/334 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + L V++ L + GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 4 MVRNKAFWVFLVVLFALPVLP--GALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTS 61 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 IGAY+ +L +RYG+S WL + V +++ +++G +++ G +L + T+ Sbjct: 62 FGQAAFVGIGAYATALLTTRYGVSPWLALVVGVVLTALVALLLGAVTMRLSGHFLPLGTI 121 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + + GI L G + S +Y+V+ Sbjct: 122 AWGLALFYLFGNLELL-GKYDGISGIPALNLFGVALES--------------GRSLYFVI 166 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + + L + A R +R ++ + ++ F ++ ++G Sbjct: 167 WAVVLAAIVSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGF 226 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + ++P F + I + + ++GG++ + AIL + + + Sbjct: 227 LYAHLQRAVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLG 286 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 S F + + + +++ + Sbjct: 287 SEGNF-------EIIVFGVLMVVLLQYARQGVWP 313 >gi|145224156|ref|YP_001134834.1| inner-membrane translocator [Mycobacterium gilvum PYR-GCK] gi|315444491|ref|YP_004077370.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Mycobacterium sp. Spyr1] gi|145216642|gb|ABP46046.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Mycobacterium gilvum PYR-GCK] gi|315262794|gb|ADT99535.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Mycobacterium sp. Spyr1] Length = 381 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 80/361 (22%), Positives = 145/361 (40%), Gaps = 23/361 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 R K+ + L A + LF Q + + A GL++VVG GL Sbjct: 12 TRAQKWVFGIVLFAGIALSPLFKPGFIDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGL 71 Query: 66 LSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMG 111 L L V YA+GAY+ +L S + +P++ ++ G+I+G Sbjct: 72 LDLGYVGFYAVGAYTVALLTSPESPWNQMSPKGILTTPWAWLACVPLAMAVTALSGLILG 131 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT-TVRSLIRFF 170 P+L+ RGDYLAI TL EI + + +TNG G+ +FL + + Sbjct: 132 TPTLRLRGDYLAIVTLGFGEIIRLLADNLADVTNGPRGLNEVAFPHFLESEQHPEGVFSV 191 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 Y + +++ L + ++ L R+ + AW +R+++ A + Sbjct: 192 SNSGGDANYGAWWFWLGLILIVGILLLVGNLERSRVGRAWIAVREDEDAAEVMGVNAFKF 251 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 KL AF + +A G++GA +A ++P F +++ + V+LGG + + I Sbjct: 252 KLWAFTIGAAIGGLSGALYAGQVQYVAPPTFNIINSMLFLCAVVLGGQGNKLGVILGAFI 311 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + G++F +AL ++++ R L R Sbjct: 312 IVYLPNRLLGVHF--------LGIDMGNLKYLFFGLALVVLMIFRPQGLFPARQHLLTYA 363 Query: 351 R 351 R Sbjct: 364 R 364 >gi|71905914|ref|YP_283501.1| inner-membrane translocator [Dechloromonas aromatica RCB] gi|71845535|gb|AAZ45031.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Dechloromonas aromatica RCB] Length = 353 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 4/338 (1%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A++ LL L A + + ++YV A GL+IVVG GLL L + YA+G Sbjct: 13 IALIAVALLGLPFVAAMGGQAWVRILDFAILYVFLALGLNIVVGFAGLLDLGYIAFYAVG 72 Query: 78 AYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY++ +L S + L IW+++P+ A ++ G+++G P+LK RGDYLAI TL EI + Sbjct: 73 AYTWALLASPHFGLHLPIWVILPIGAGLACFAGVLLGSPTLKLRGDYLAIVTLGFGEIVR 132 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + N G + + + V I YY+L+ + L Sbjct: 133 IFMNNLNAPVNITNGPQGITLIDPVAFGDFRFSGTSQLFGLSVSGPIKYYYLLVALAILV 192 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I L L+ + I AW+ IR+++ A ++ KL AFA+ ++F G+AG FAA + Sbjct: 193 IVINLRLQHSRIGRAWQAIREDEIAAKAVGINARNIKLLAFAMGASFGGIAGGVFAAMQG 252 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC-GMNFYYFNSLLKFD 313 +SP+ F E+I+++++V+LGGM + + +L + E+ G+ K Sbjct: 253 FVSPESFSLMESIMILAMVVLGGMGHIPGVILGAVLLSILPEVLRYGVGPAQMALFGKML 312 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +AL LV+ + L L+ Sbjct: 313 VDPESLRMLVFGLALVLVMRFKPAGLWPSPERKRELQE 350 >gi|293605597|ref|ZP_06687977.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292815977|gb|EFF75078.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 411 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 97/334 (29%), Positives = 155/334 (46%), Gaps = 24/334 (7%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + + +LIYVM GL+IVVG GLL L V YA+GAY+Y +L Sbjct: 93 IAVVWPFFAGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAYTYALLYH 152 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 G S W +P S ++ G ++G P L+ RGDYLAI TL E+ + +LI +T G Sbjct: 153 WGGWSFWEALPFSGAMAALFGFVLGFPVLRLRGDYLAIVTLGFGEMIRLLLINLNTLTGG 212 Query: 147 KAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 GI + G + + FF I++Y + L + ++ + Sbjct: 213 PDGISGIPKPTVFGLEMTRRASTEGGTTFHEFFGLTFQNQDMVIYLYMMALLLALITLFV 272 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R + AW +R+++ A SL KLSAF + + F G GAFFAA + ++ Sbjct: 273 STRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGATFAGFGGAFFAARQGMVN 332 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+ ++++IV+LGGM S + A +L + EL Y Sbjct: 333 PESFTFIESALILAIVVLGGMGSQVGVILAAILLTVLPELAREFAEY------------- 379 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL ++ P L + Sbjct: 380 --RMLMFGLVMVLMMMWRPQGLLPMKRPHVELSK 411 >gi|302868841|ref|YP_003837478.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029] gi|302571700|gb|ADL47902.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029] Length = 379 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 77/353 (21%), Positives = 148/353 (41%), Gaps = 29/353 (8%) Query: 10 KYDKILCLLAVVYPLLLFL-------FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62 ++ + + L AV+ + + IYV+ A GL+IVVG Sbjct: 34 RWVRWVLLAAVIVFFYALPNKEFYQYLGPIPTPGANFTQVLFTVSIYVLLAVGLNIVVGF 93 Query: 63 LGLLSLNCVIAYAIGAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 GLL L +A+GAY+ +L S L++P++ ++ G+++G P+L+ Sbjct: 94 AGLLDLGYFGFFAVGAYTVAVLTSPSSNLKTLWPWLLVVPIAIGLTMVSGVMLGTPTLRL 153 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLA+ TL +E+ + + + + G+ G P V Sbjct: 154 RGDYLALVTLGFAEMIRIAAVSSEFL-RGQRGFSEIPHP--------PGQYADGRPWFGV 204 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + Y+++L + L + L + + AW +IR+++ A + KL AFA Sbjct: 205 LDARPYYWLVLTLIILVVIGVRNLTHSRVGRAWISIREDEDAAQLMGVPTFKFKLWAFAS 264 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 +A G+AGA FA ++ ++ F+ +II+++ VI GG ++ ++ ++E Sbjct: 265 GAAIAGLAGALFAGKQNFVNSQNFELLNSIIILAAVIFGGSGNIVGAIVGGGLVAYMIER 324 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 G+ F + L ++++ R L+ R + + Sbjct: 325 FRGIEL--------FGIELYEYRFLFFGLVLVVMMIFRPQGLIPNRRRAAEFK 369 >gi|229826724|ref|ZP_04452793.1| hypothetical protein GCWU000182_02100 [Abiotrophia defectiva ATCC 49176] gi|229789594|gb|EEP25708.1| hypothetical protein GCWU000182_02100 [Abiotrophia defectiva ATCC 49176] Length = 352 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 28/323 (8%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + + +Y+ ++ I+I Y + A GL+I+ G GL+SL AIGAY+ Sbjct: 28 IALFAFLIVFPMIFNNQYLLTVVIKIGSYAILAMGLNILTGYTGLVSLGHAGFVAIGAYT 87 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 I+ ++ ++ ++ + + +G G+++GLP+L+ G YL+I TL EI + IL+ W Sbjct: 88 ASIVAIKFNINFFIATVIGMIAAGIIGVLLGLPTLRVTGTYLSIITLGFGEIVKMILMNW 147 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G G+ + G +YY+++ ++A L Sbjct: 148 ADVTGGTLGVKNIPKPSLFGFNFNVTNHG-------------LYYLMIVFVLITALFCLS 194 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L ++ A+ IR ++ A + + K+ AF +S++ + GA ++ I P+ Sbjct: 195 LVKSKTGRAFMAIRADELASTMMGIPVTRYKILAFVISASICALGGALYSTLIGYIDPNT 254 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F + +++SIVILGGM +L + + ILI E+ + Y Sbjct: 255 FNFDVSTMILSIVILGGMGTLRGMFIGSIILIAFPEVSRFLMEY---------------R 299 Query: 321 TTLMVIALFLVILMRSHSLLRLR 343 L L L++ R +L + Sbjct: 300 FVLYGAILVLMMRFRPQGILGWK 322 >gi|301383734|ref|ZP_07232152.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. tomato Max13] Length = 437 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 104 IIPLLIVVAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W +P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLWFGEIIRLVLNN 223 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V +F R + +F F + + IF+Y VL + Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417 >gi|295680766|ref|YP_003609340.1| ABC transporter [Burkholderia sp. CCGE1002] gi|295440661|gb|ADG19829.1| ABC transporter related protein [Burkholderia sp. CCGE1002] Length = 646 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 140/307 (45%), Gaps = 16/307 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+A + L+ Y + I+IY + +GL IVVG G +SL + + Sbjct: 6 LVATAFVLIALAVFPVLSGNPYYIHLVETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGV 65 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L + GL I++ P++ +++ G I+ LP+L+ G YLA+ TL I Q + Sbjct: 66 GAYTAGVLFMKLGLPIFVTAPLAILVTAGFGAILALPALRVSGPYLAMVTLAFGTILQIL 125 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + +TNG G+ + E+ Y+++ + S Sbjct: 126 INEMDFLTNGPMGVKIPKPSLGARPM----------------NEVEYYWLVAALLVASLI 169 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + ++ + A+ +RD+ A + ++ K+ AF +S+ F G+AG ++ S I Sbjct: 170 VVHRVLKSHLGRAFEALRDSPIASDCMGVSVYRYKVYAFVISAGFAGLAGCLYSYSEQYI 229 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP+ + F I+ + +I+GG + + +AI++ + +L ++ + + + Sbjct: 230 SPNTYNFELTILFLLAIIMGGRKTRTGAVLGSAIIVLLPKLLDDIDMFRIVASVLAAAVV 289 Query: 317 NMRHTTL 323 L Sbjct: 290 IGAGVAL 296 >gi|239978892|ref|ZP_04701416.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces albus J1074] Length = 588 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 83/347 (23%), Positives = 139/347 (40%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V + T++ S+G ILI+ A GL+IVVG GLL L V +G Sbjct: 239 VTVTAAFVSAFAFPFTQTSDAYTSVGTNILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 298 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ + W + + A+ S G+I+G P+L+ GDYLAI TL E Sbjct: 299 AYTAALVSGSPNSPFDVHVPFWAAVLLGALASLIFGVIIGAPTLRLHGDYLAIVTLGFGE 358 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ + + G + L + + Y ++L Sbjct: 359 IFRIGMQNLDGTSGPDITNGPNGIPNIPDLEMFGFNFGESHTVLGVELGRFSNYYLLMLL 418 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + ++ I AW IR+++ A ++ KL AFA+ + G+AG Sbjct: 419 VTIVVVLVFRRSDQSRIGRAWVAIREDETAARAMGINAFRLKLLAFALGATLAGLAGTVQ 478 Query: 250 AASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A ++P +KF E++ +++ VILGGM ++S A+L + M Y Sbjct: 479 AHVTYTVTPAQYKFVESMPPNSAFLLAAVILGGMGTVSGPLIGAALLYLIPAKLQFMADY 538 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L IAL L++ R L+ R + Sbjct: 539 ---------------QLLLFGIALVLLMRFRPEGLVADRRKQLEFKE 570 >gi|220923604|ref|YP_002498906.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060] gi|219948211|gb|ACL58603.1| ABC transporter related [Methylobacterium nodulans ORS 2060] Length = 840 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 127/347 (36%), Gaps = 36/347 (10%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 R ++ + A+V L +G T + ++++ + GL+I+VG GL Sbjct: 2 TRTDRLALPAFVAALVVLPLGLQAIGLTLTS------ATDVVVFAVACLGLNILVGQTGL 55 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP-VSAMISGACGMIMGLPSLKFRGDYLAI 124 +S + +GAY+ I + + + + +++GL L+ RG Y ++ Sbjct: 56 VSFGHGAFFGLGAYAAAISQRAFFPGSLVAPTLFALVFVALAALLVGLLVLRRRGVYFSL 115 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL +S + + +W +T G++G R + + Y Sbjct: 116 LTLALSALSFTVAYRWTALTGGESGFGGVVRPA--------------LLGFDLGESVLWY 161 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 V+ F + LRR+ + + IR+N++ L KL AF VS+ G Sbjct: 162 GVVAACGFGVLYALARLRRSPVGSVLEAIRENEQRARFLGYPTTRYKLLAFTVSATVTGF 221 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG + S + + + ++++V++GGM SL+ A I EL Sbjct: 222 AGVLSVFTHRFASAEPLGIAFSGELLAMVVIGGMRSLAGPAIGALFFILFRELLSIWTGD 281 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + IL L+ + L R Sbjct: 282 W---------------LFWFGLLFIGFILFSPDGLVGIGERILRLMR 313 >gi|290508913|ref|ZP_06548284.1| branched-chain amino acid transport system permease [Klebsiella sp. 1_1_55] gi|289778307|gb|EFD86304.1| branched-chain amino acid transport system permease [Klebsiella sp. 1_1_55] Length = 428 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 160/339 (47%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 101 IMPLLAVLAIAFPFLASKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P+ A+++ G ++G P L+ GDYLAI TL EI + +L Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAVLAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V F R + FF + + IF+Y VL + Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRARDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + L R I AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL G + Y Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + ++++ R L+R L + Sbjct: 393 -------RVLLFGVLMVVMMIWRPRGLVRTSRSGVALRK 424 >gi|288919852|ref|ZP_06414176.1| inner-membrane translocator [Frankia sp. EUN1f] gi|288348767|gb|EFC83020.1| inner-membrane translocator [Frankia sp. EUN1f] Length = 469 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 31/311 (9%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------LGSRYGLSI 92 ++ +I IY + A GL++VVG GLL L + +AIGAY+ + + L+ Sbjct: 139 ALVSEIGIYALLALGLNVVVGYAGLLDLGYIAFFAIGAYTTAYLTSADAMPWHAPWQLNP 198 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + ++P++ +++ G+++G P+L+ RGDYLAI TL EI Q + +T G G++ Sbjct: 199 FFVLPIALLVAAVAGVVLGGPTLRLRGDYLAIVTLGFGEIVQLLANNADGVTGGPRGVFG 258 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 L + S+ + + YY+L+ + L + R+ AW Sbjct: 259 LPPLS---------VELPGVRYSWGLDPLPYYYLLIALIVLVMVVFGRWERSRTGRAWTA 309 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR ++ A + + KL AFAV ++ G AG A + +P F +++V++I Sbjct: 310 IRQDEVAAEATGVATMRMKLLAFAVGASVSGFAGVVVATKQFF-NPQSFGLQASLLVLTI 368 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 VI GGM S + +L G L D + L++ Sbjct: 369 VIFGGMGSRLGVVLGALVLQGTAFLLR-------------DTVPPADRFIYFGAVVVLMM 415 Query: 333 LMRSHSLLRLR 343 + R LL R Sbjct: 416 IFRPEGLLPPR 426 >gi|332298883|ref|YP_004440805.1| ABC-type transporter, integral membrane subunit [Treponema brennaborense DSM 12168] gi|332181986|gb|AEE17674.1| ABC-type transporter, integral membrane subunit [Treponema brennaborense DSM 12168] Length = 353 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 35/344 (10%) Query: 3 IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62 + ++ + I AV+ ++ + Y + + + A ++I+ G Sbjct: 1 MMKNKILRNMLIPGSFAVLAVVVPGFLISLGVIDAYTAQIITLAGVNAIMAISVNIICGI 60 Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G LSL AIGAY+ +IL G+ + + + ++A+++ G+++G P+LK +GDYL Sbjct: 61 TGQLSLGQAGFMAIGAYTTIILTQTVGIPMPVSMIIAALVTVVFGILIGFPTLKLQGDYL 120 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + +L+ +K +T G G RF + F Sbjct: 121 AIVTLGFGEIIRVMLVNFKSVTGGANG--------------------LRFTTILAARADF 160 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y+ ++G+ + ++ R+ A +R+++ A S + K+ FAV+SA Sbjct: 161 AYFAVIGVLVVIIVLLQNFVRSTYGRAILAVREDEIAANSNGIGVFRYKMIGFAVASAVA 220 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+ GA +A + PD+ F+ +I + V+LGGM S++ A +L + E + Sbjct: 221 GIGGALYAPFIGFVKPDLASFNRSIDYLIFVVLGGMGSVTGSVIAAFVLTYLQEFLRFLQ 280 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 Y + + L V+L R LL + S Sbjct: 281 DY---------------RLLIYPLILIFVMLFRPQGLLGTKEFS 309 >gi|171057676|ref|YP_001790025.1| ABC transporter-like protein [Leptothrix cholodnii SP-6] gi|170775121|gb|ACB33260.1| ABC transporter-related protein [Leptothrix cholodnii SP-6] Length = 593 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 118/323 (36%), Gaps = 22/323 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + ++L L ++ + I +Y + + GL ++ G GL S +GA Sbjct: 8 LFIALVVLTALLPQLPVPEFWITQLNYIGLYAIVSLGLVLLTGVSGLTSFGQAAFVGLGA 67 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ L +++ +S WL + + I+ +++ +L+ G YL +AT+ + + Sbjct: 68 YTTAYLTTQWAMSPWLTVFIGVGITVITALVLAAITLRMSGHYLPLATIAWALSLYYSMS 127 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + + + +Y++ + LSA + Sbjct: 128 NMEFL---------------GKYDGILGVPAMSLFGFSLASGRSYFYLIWIVALLSAVAV 172 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L + A R ++ ++ + K+ AF +++ ++G FA + ++P Sbjct: 173 IRLLDSRSGRAIRALKGGVTMAEAMGISTYRYKVLAFVLAAILASLSGWLFAHLQRTVNP 232 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F S+ I + + +LGG+ ++ A++ + + + Sbjct: 233 SPFALSKGIEYLFMAVLGGIGNVWGAFTGAAVVKLLEDQLQVLLPRLIGG-------SGN 285 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + I L +V+ L Sbjct: 286 YEIIVFGIVLVVVLKYAPQGLWP 308 >gi|39936868|ref|NP_949144.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] gi|192292697|ref|YP_001993302.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|39650725|emb|CAE29248.1| putative permease of ABC transporter (high-affinity branched-chain amino acid transport) [Rhodopseudomonas palustris CGA009] gi|192286446|gb|ACF02827.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 443 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 181/337 (53%), Gaps = 19/337 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++A + FL +Q+YI +GI +L YVM WGL+IVVG GLL L V YA+ Sbjct: 106 VVAPALLIFTFLVPVIFYNQRYILDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 165 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAYSY +L + +GLS W+ +P++ +++ G+I+G P L+ RGDYLAI TL EI + + Sbjct: 166 GAYSYALLATNFGLSFWICLPLAGILAAFWGVILGFPVLRLRGDYLAIVTLAFGEIIRLV 225 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF----FRFPSSFVIYEIFMYYVLLGMCF 192 +I W+ +T G GI R G + P S +F++Y++L + Sbjct: 226 IINWQTLTGGPNGISGIPRPTLFGIPLAPGPNGLAAQLGIPFSPTHRLVFLFYLILILAL 285 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 ++ + LRR I AW +R+++ A +L KL+AFA + F G AGAFFA Sbjct: 286 ITNWATIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFATGAMFGGFAGAFFATR 345 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ISP+ F F E+ +V++IV+LGGM S +A A LIG EL G++ + Sbjct: 346 QGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAVTLIGGFELFRGLDQF-------- 397 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + +A+ L+++ R L+ R P+ +L Sbjct: 398 -------RMLVFGMAMVLLMIWRPRGLIGHRAPTVYL 427 >gi|167564632|ref|ZP_02357548.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding protein [Burkholderia oklahomensis EO147] Length = 594 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 118/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVVLFALPALPGAVRVPEYWITLLNYIGLYAIVAIGLVMLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ L + YG S WL + ++ +++G +++ G +L + T+ Sbjct: 69 GIGAYATAYLTTAYGASPWLGLIAGIALTALVALVLGAVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G T+ + +YYV+ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALTVFGQTLDT--------------GRSLYYVIWVVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + +++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTGWMRVAIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG+ + I+ + + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVAHVWGAVLGAVIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|312115667|ref|YP_004013263.1| ABC transporter [Rhodomicrobium vannielii ATCC 17100] gi|311220796|gb|ADP72164.1| ABC transporter related protein [Rhodomicrobium vannielii ATCC 17100] Length = 661 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 74/290 (25%), Positives = 136/290 (46%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + A + + LF F Y + + IY + GL IVVG G +SL Sbjct: 3 RALPFIGAGLLAIGLFAFPFLAGQNSYYIHLVQMMAIYAILILGLDIVVGYTGQVSLGHA 62 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + IGAY ++ YGL +W + V +++G G ++ +P+L+ G YLA+ TL Sbjct: 63 GLFGIGAYGAAVIFHHYGLGVWPGLLVGVIVTGIFGAVLAVPALRVIGPYLAMVTLAFGT 122 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I Q ++ +W +TNG G+ + RS + + + YY+ + + Sbjct: 123 IIQIVINEWTGLTNGPLGVTLPPPRVVDFADWRSFWQGTLGLKAAEFQRLEFYYLCVLLM 182 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ ++ + R+ A+ +RD+ A + ++ K+ AF VS+A G+AGA F+ Sbjct: 183 LVAILVVNRVVRSQYGRAFEALRDSPIACDCMGVSVYRYKVYAFVVSAALAGLAGALFSW 242 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 S +SP+ + F +I+ + VILGG S + I++ + + + Sbjct: 243 SERYVSPNTYNFELSILFLLAVILGGRKSRAGPLIGAFIIVYLPNVLSDI 292 >gi|108799984|ref|YP_640181.1| inner-membrane translocator [Mycobacterium sp. MCS] gi|108770403|gb|ABG09125.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Mycobacterium sp. MCS] Length = 390 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 146/354 (41%), Gaps = 23/354 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 R+ K+ + + L +F Q + + A GL++VVG GL Sbjct: 20 TRVQKWVVGAVVFLAIGLLPIFTPSWLDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGL 79 Query: 66 LSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMG 111 L L V YA+GAY+ +L S + +P++ ++ G+I+G Sbjct: 80 LDLGYVGFYAVGAYTVALLTSPSSPWNQAGPGGWFTTDWAWLACVPLAMAVTALAGLILG 139 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 P+L+ RGDYLAI TL EI + + +TNG G+ + + F R Sbjct: 140 TPTLRLRGDYLAIVTLGFGEIIRLLADNLSDVTNGPRGLNEVEYPRVGESERLPEGVFSR 199 Query: 172 FPSSF-VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 S+ Y + +++ L + ++ L R+ + AW +R+++ A + Sbjct: 200 ANSTGEANYGTWWFWLGLLLIVGILLLVGNLERSRVGRAWVAVREDEDAAEVMGVNTFRF 259 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 KL AF + +A G++GA +A ++P F +++ + V+LGG + + I Sbjct: 260 KLWAFVIGAAIGGLSGALYAGQVQYVAPPTFNIINSMLFLCAVVLGGQGNKLGVIFGAFI 319 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ + G++F + +AL ++++ R L R Sbjct: 320 IVYLPNRLLGVHF--------LGINLGDLKYLFFGLALVVLMIFRPQGLFPARQ 365 >gi|148549945|ref|YP_001270047.1| inner-membrane translocator [Pseudomonas putida F1] gi|148514003|gb|ABQ80863.1| inner-membrane translocator [Pseudomonas putida F1] Length = 433 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 106 IIPALVVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ +F R + FF F + + +F+Y VL + Sbjct: 226 WLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNANLKFVFIYAVLFMVVL 285 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R + AW +R+++ A S+ + KLSAF + ++ G+AG FFA Sbjct: 286 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 345 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + L+++ R L+R Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419 >gi|330502354|ref|YP_004379223.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas mendocina NK-01] gi|328916640|gb|AEB57471.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas mendocina NK-01] Length = 419 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 96/342 (28%), Positives = 169/342 (49%), Gaps = 26/342 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ +++ + + + + ILIYVM GL+IVVG GLL L V YA+GAY Sbjct: 94 IILAMVMVALVWPFFASRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY IL +GL W+ +P++ M++ G ++G P L+ RGDYLAI TL EI + +L Sbjct: 154 SYAILAHYFGLGFWICLPLAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRN 213 Query: 140 WKPITNGKAGIYVAD----------RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 +T G G+ +A+ + + + +F + IF+Y + L Sbjct: 214 LTDLTGGPNGLSIANENKPTLFGLSFERRVPADMPTFHGYFEMAYNSQYKVIFLYLIALL 273 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ ++ L R I AW +R+++ A +L KLSAF + ++ G AG+FF Sbjct: 274 LVLLTLFLVNRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTIGASLAGFAGSFF 333 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +++ + E+ Sbjct: 334 AARQGLVTPESFTFIESAMILAIVVLGGMGSQLGVILAAIVMVMLQEM------------ 381 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + + +++ R LL ++ P L+R Sbjct: 382 ----RELSEYRMLIFGLVMIFMMVWRPQGLLPMQRPHLELKR 419 >gi|120403827|ref|YP_953656.1| inner-membrane translocator [Mycobacterium vanbaalenii PYR-1] gi|119956645|gb|ABM13650.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Mycobacterium vanbaalenii PYR-1] Length = 391 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 81/361 (22%), Positives = 145/361 (40%), Gaps = 23/361 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 R K+ + L A + LF Q + + A GL++VVG GL Sbjct: 22 TRAQKWVFGIILFAGIALSPLFTPGFIDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGL 81 Query: 66 LSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMG 111 L L V YA+GAY+ +L S + +P++ ++ G+I+G Sbjct: 82 LDLGYVGFYAVGAYTVALLTSPESPWNKLGPTGFFSTPWAWLSCVPLAMAVTALSGLILG 141 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT-TVRSLIRFF 170 P+L+ RGDYLAI TL EI + + ITNG G+ +FL + + Sbjct: 142 TPTLRLRGDYLAIVTLGFGEIIRLLADNLADITNGPRGLNEVAFPHFLESDQHPEGVFSV 201 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 Y + +++ L + ++ L R+ + AW +R+++ A + Sbjct: 202 SNSGGDANYGTWWFWLGLILIVGILLLVGNLERSRVGRAWIAVREDEDAAEVMGVNAFKF 261 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 KL AF + +A G++GA +A ++P F +++ + V+LGG + + I Sbjct: 262 KLWAFTIGAAIGGLSGALYAGQVQYVAPPTFNIINSMLFLCAVVLGGQGNKLGVILGAFI 321 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + G++F +AL ++++ R L R Sbjct: 322 IVYLPNRLLGVHF--------LGIDMGNLKYLFFGLALVVLMIFRPQGLFPARQHLLTYA 373 Query: 351 R 351 R Sbjct: 374 R 374 >gi|316935056|ref|YP_004110038.1| ABC transporter-like protein [Rhodopseudomonas palustris DX-1] gi|315602770|gb|ADU45305.1| ABC transporter related protein [Rhodopseudomonas palustris DX-1] Length = 589 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 65/334 (19%), Positives = 124/334 (37%), Gaps = 27/334 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + ++ +L A + L L + + + I + + A GL ++ G GL S Sbjct: 1 MTRWLPVLLFAAAMTALPLIPGIPP-----FWIVLLDNIGLAALVAMGLVLLTGVGGLTS 55 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 GAY+ + + YGLS WL +P S ++G +++GL +++ G YL + T+ Sbjct: 56 FGQAAFCGFGAYTTAYITTVYGLSPWLALPASLAVAGIAAVLLGLMTVRLSGHYLPLGTI 115 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + K + GI L + +Y+V+ Sbjct: 116 AWGIALYYLFSKLDFL-GRNDGISRVPPLSIGPIDMYDPH--------------SIYFVI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 M +SA + + L + A R +R A + AKL F ++ G++G Sbjct: 161 WAMVLISAVLTMNLLDSRTGRAIRALRRGHVAAEAFGVQTARAKLLVFIYAAVLAGLSGW 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + ++P F I + I ++GG + AI+I + E+ G F Sbjct: 221 LYAHFQRNVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIILKEVLQGYLPLLFG 280 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + I L +++ + + Sbjct: 281 GQ-------GQLEIIVFGILLVVLLQLAPGGVWP 307 >gi|113868982|ref|YP_727471.1| ABC transporter permease [Ralstonia eutropha H16] gi|113527758|emb|CAJ94103.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 385 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 93/345 (26%), Positives = 154/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + L+ + L F T Y + L+Y+M A GL+IVVG GLL L + Sbjct: 22 LAALIGFLVIALCAPFFVQTLGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAF 81 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY +LGS + LS+W ++P++ +++ G+++G P+LK Sbjct: 82 YAVGAYLMALLGSPHLANQFEWIQQLFPTGIHLSMWFVLPIAILVAATFGVLLGAPTLKL 141 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + + Sbjct: 142 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITAVDPVHIFGFDFSKSHEIFGLKF 201 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+L+ + + + L L+ + I A+ IR+++ A ++ KL AFA+ Sbjct: 202 TPVFMYYYLLVFLVIVIVFVSLRLQTSRIGRAFVAIREDEIAAKAMGINTRNIKLLAFAM 261 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G +GA F A + +SP+ F E+I V++IV+LGGM + + +L+G EL Sbjct: 262 GASFGGASGAVFGAFQGFVSPESFTLWESIYVLAIVVLGGMGHIPGVILGGVLLVGFQEL 321 Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + L +AL V+L R + Sbjct: 322 LRVVAEPMQTGLFGHVIVDAEVLRQLLFGLALVGVMLYRPAGIWP 366 >gi|239623157|ref|ZP_04666188.1| ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239522524|gb|EEQ62390.1| ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 336 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 133/323 (41%), Gaps = 29/323 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ L++ + L Q I I++Y A L+++ G G L +AIGA Sbjct: 16 VLLALLVISIVLPFVIKQALILRYICTIMMYATLAGSLNVINGYSGQTCLGQAGFFAIGA 75 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ L G+ W+ +PV+ +++ G+I+ LP+LK G YL+I TL SEI + I Sbjct: 76 YTCAALSKNVGVDFWIALPVAGILAALVGLIVSLPTLKLSGIYLSIVTLGASEIIRIIAQ 135 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W P+T G GI F G + + Y++ L + + I Sbjct: 136 TWTPVTGGALGIKQIPYPNFFGLEMFK--------------PKYYYFIFLIIGVVFLFIT 181 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + ++ + AW IR++Q A SL K F + + G+ GA +A + I Sbjct: 182 DRVLKSRVGRAWMAIREDQVAAKSLGVETSKCKCMNFMYGAFWAGIIGAAYAPFVNYIES 241 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F V+++V++GG +L + I+ + E + Sbjct: 242 SQFTTDTGFNVLAMVVIGGQGTLLGPILGSTIVTILTEALRFLE---------------N 286 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + I + L++ +R L+ Sbjct: 287 WRYVIYAIIIILMMWVRPQGLMG 309 >gi|218782215|ref|YP_002433533.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218763599|gb|ACL06065.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 396 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 97/321 (30%), Positives = 159/321 (49%), Gaps = 26/321 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + +F + Y ++ +LIYVM GL+IVVG GLL L V YA+GAY Sbjct: 91 AIVLVGIFALSIPFWADMYNTNIMTNVLIYVMLGLGLNIVVGLAGLLDLGYVAFYAVGAY 150 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L +G + W+++P++ + A G+ +G P L+ RGDYLAI TL EI + +L Sbjct: 151 AYALLNHHFGANFWVILPMAGFLGAAFGVTLGFPVLRLRGDYLAIVTLGFGEIIRLVLEN 210 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W + G +GI DR F G + + FMYYV+L + L+ + Sbjct: 211 WNEFSMGPSGIANIDRPPFFGIKMDLFQKTD-----------FMYYVVLVLAILTIIAVT 259 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L+ + I AW +R+++ A ++ KL AFA+ + + MAG FAA I+P Sbjct: 260 RLKNSRIGRAWIALREDEIACQAMGVDRTKTKLMAFALGATWASMAGVVFAAKSTFINPP 319 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F F E+++++ IV+LGGM S+ + +I+I + E + Y Sbjct: 320 SFSFWESVLILVIVVLGGMGSVVGVILGASIIILLPEYFRQFSEY--------------- 364 Query: 320 HTTLMVIALFLVILMRSHSLL 340 L A+ L+++ R ++ Sbjct: 365 RMILFGGAMVLMMVFRPTGIV 385 >gi|262040516|ref|ZP_06013757.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042109|gb|EEW43139.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 426 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 104/341 (30%), Positives = 160/341 (46%), Gaps = 23/341 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ + + +IY++ GL++VVG GLL L YAIGA Sbjct: 91 LFLIALLVIAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + F G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFSRSAREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L +I L R + AW +R+++ A SL + KL+AF +S+AF G AG F Sbjct: 271 LVVLILFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSM--- 387 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L + + ++++ R LL + L+ Sbjct: 388 -----------LMLGGLMVLMMMIWRPQGLLPMTRVQLKLK 417 >gi|325273658|ref|ZP_08139871.1| inner-membrane translocator [Pseudomonas sp. TJI-51] gi|324101204|gb|EGB98837.1| inner-membrane translocator [Pseudomonas sp. TJI-51] Length = 433 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 98/329 (29%), Positives = 157/329 (47%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L++ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 106 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ + R + FF F + + +F+Y VL + Sbjct: 226 WLSFTGGPNGMPAPSPTFLGLEFGRRAKDGGVPIHEFFGFAYNPNLKFVFIYAVLFMVVL 285 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 I L R + AW +R+++ A S+ + KLSAF + ++ G+AG FFA Sbjct: 286 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 345 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + L+++ R L+R Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419 >gi|269925704|ref|YP_003322327.1| inner-membrane translocator [Thermobaculum terrenum ATCC BAA-798] gi|269789364|gb|ACZ41505.1| inner-membrane translocator [Thermobaculum terrenum ATCC BAA-798] Length = 398 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 91/369 (24%), Positives = 159/369 (43%), Gaps = 34/369 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGAT---KSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 R +K + + + ++ L + + I+ Y++ A GL+IVVG Sbjct: 17 RKDKVNTVTATIVILAALTWPWVVDPLMRLVLHFSMIDQMFPIIAYILLALGLNIVVGYA 76 Query: 64 GLLSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMI 109 GLL L +AIGAY+ IL S ++ W + ++ I+ CG+I Sbjct: 77 GLLDLGYAAFFAIGAYTIAILTSPRSPVAQFLSSNMPFLHVNFWFSLILAFFITAICGVI 136 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 +G P+L+ RGDYLAI TL EI I + IT G+ G+ D+ G + Sbjct: 137 LGAPTLRLRGDYLAIVTLGFGEIVPVIFLNAHSITYGEQGLNAIDQPVIFGFRL------ 190 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 S I YY+L+ + + I LR + I AW +R+++ A S+ ++ Sbjct: 191 ----GSGPQSTIAWYYLLIAIGAILIFIARRLRDSRIGRAWMAMREDEIAATSMGIDLVR 246 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL AFA+ ++F G G FA+ +P F+FS +++++ +VILGGM ++ + Sbjct: 247 TKLLAFAMGASFSGFVGVMFASRYSFAAPSQFEFSTSVLLLCMVILGGMGNIWGVIVGGF 306 Query: 290 ILIGVVELCCGMNFYYFNSL-------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +L + + +L + + + L +++L+R +L Sbjct: 307 LLGLFDRVLADKISEWGQTLGERTNWSFLLNLDLTKYRYLIFGLTLVIMMLLRPEGILPS 366 Query: 343 RTPSNFLER 351 L Sbjct: 367 AERMAELHE 375 >gi|295839496|ref|ZP_06826429.1| branched chain amino acid transport permease [Streptomyces sp. SPB74] gi|197699383|gb|EDY46316.1| branched chain amino acid transport permease [Streptomyces sp. SPB74] Length = 599 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 76/351 (21%), Positives = 134/351 (38%), Gaps = 34/351 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +++ + + T+ +G ILI+ A GL++VVG GLL L V + Sbjct: 240 AVSLAAMFVAAICFPFTQDNDTYALIGTNILIFATVALGLNVVVGLAGLLDLGYVAFLGV 299 Query: 77 GAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 GAY+ ++ L + A +S G+++G P+L+ RGDYLAI TL Sbjct: 300 GAYTAALVSGSPQSSIGVHFPFPLAVLTGAAVSLVFGVVIGAPTLRLRGDYLAIVTLGFG 359 Query: 131 EIFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 EIF+ + + NG G+ L G P + Sbjct: 360 EIFRITMNNLNGNSGPDLVNGSQGVPNIPDLELFGFKFGEAHDVLGLPLGRSGN---YFL 416 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++L + + ++ I AW IR+++ A ++ KL AFA+ + G+A Sbjct: 417 LMLLFTAIVLLVFHRSGQSRIGRAWVAIREDETAASAMGINGFRLKLLAFALGATLAGLA 476 Query: 246 GAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G A ++P+ ++F+ + +I+ VILGGM +++ A+L + E Sbjct: 477 GTVQAHVNYSVTPEQYQFAGTAPPNSAFLIAAVILGGMGTITGPLIGAALLFLIPEKLEF 536 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 M Y + +R ++ R Sbjct: 537 MQKYQLLLFGLALILL---------------MRLRPEGIVPDRRKQLEFHE 572 >gi|169629709|ref|YP_001703358.1| high-affinity branched-chain amino acid ABC transporter (LivM) [Mycobacterium abscessus ATCC 19977] gi|169241676|emb|CAM62704.1| High-affinity branched-chain amino acid ABC transporter (LivM) [Mycobacterium abscessus] Length = 390 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 22/359 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R ++ + A++ L ++ + Q + + A GL++VVG GLL Sbjct: 22 RPVQWVYGVVGFALLALLPVWKIPYLDTPNTSFGGVMAQFAMVALIAIGLNVVVGQAGLL 81 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLS--------------IWLLIPVSAMISGACGMIMGL 112 L V YAIGAY+ +L S +P++ I+ G+I+G Sbjct: 82 DLGYVGFYAIGAYTVALLTSPDSPWNRMGTSAFFSSDWAWLSCLPIAVAITACFGLILGT 141 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 P+L+ RGDYLAI TL EI + + + VA + Sbjct: 142 PTLRLRGDYLAIVTLGFGEIIRLLADNLDVTNGPRGLHKVAYPHVGEQHVHGGGVFSSAN 201 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + Y ++ Y++ L + ++ L R+ + +W IR+++ A + KL Sbjct: 202 SGGHLNYGVWWYWLGLCLIAAVLVLMGNLERSRVGRSWVAIREDEDAAEMMGVPTFRFKL 261 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 AF + ++ G++GA +A ++ F +++ + V+LGG + + I++ Sbjct: 262 WAFVIGASIGGLSGALYAGQVQYVASPTFNIINSMLFLCAVVLGGQGNKLGVVVGAFIIV 321 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + G+ +AL +++L R L R Sbjct: 322 YLPNRLLGVQ--------VQGIDLGNLKYLFFGLALVVLMLFRPQGLFPAHQKLMAYWR 372 >gi|311106494|ref|YP_003979347.1| high-affinity branched-chain amino acid transport system permease BraE [Achromobacter xylosoxidans A8] gi|310761183|gb|ADP16632.1| high-affinity branched-chain amino acid transport system permease protein BraE [Achromobacter xylosoxidans A8] Length = 411 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 24/334 (7%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + + +LIYVM GL+IVVG GLL L V YA+GAY+Y +L Sbjct: 93 IAVIWPFFAGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAYTYALLYH 152 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 G S W +P + +S G I+G P L+ RGDYLAI TL E+ + +LI +T G Sbjct: 153 WGGWSFWEALPFAGAMSALFGFILGFPVLRLRGDYLAIVTLGFGEMIRLLLINLNTLTGG 212 Query: 147 KAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 GI + G + + F + +++Y + L + + + Sbjct: 213 PDGISGIPKPTVFGMEMTRRASTEGGTTFHEFMGWTFQNQHMVVYLYLMALLLALATLFV 272 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R + AW +R+++ A SL KLSAF + + F G GAFFAA + ++ Sbjct: 273 STRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFFAARQGMVN 332 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+ ++++IV+LGGM S + A +L + E+ Y Sbjct: 333 PESFTFIESALILAIVVLGGMGSQVGVILAAVLLTVLPEVAREFAEY------------- 379 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ R LL ++ P L + Sbjct: 380 --RMLMFGLVMVLMMMWRPQGLLPMKRPHVELAK 411 >gi|46202078|ref|ZP_00208373.1| COG4177: ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 415 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 172/346 (49%), Gaps = 23/346 (6%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + + S + + +LIYVM WGL+IVVG GLL L V Sbjct: 81 RAAMVYVGWAMVAFALVLPFLPFSGRNLVDKATLVLIYVMLGWGLNIVVGLAGLLDLGFV 140 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 YA+GAYSY +L +GLS W+ +P++ +++ + G+++G P L+ RGDY+AI T+ + E Sbjct: 141 AFYAVGAYSYALLSQTFGLSFWVCLPLAGLLAASFGLVLGFPVLRLRGDYIAIVTMGLGE 200 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFM 183 I + IL W+ +T G GI +R F G + R FF S F+ Sbjct: 201 IIRVILQNWQDVTGGPNGISGIERPSFFGLSFKMVPPEGSRGFAEFFGLEYSADHRVTFL 260 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y+++L + L+ I L +RR + AW +R+++ A SL KLSAFA + F G Sbjct: 261 YFLILALALLTNVITLRIRRLPVGRAWEALREDEIACRSLGINPTLVKLSAFATGAMFAG 320 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 AG+FFA + ISP+ F F E+ ++++IV+LGGM S I A +L+G+ E + Sbjct: 321 FAGSFFATRQGFISPESFTFIESAVILAIVVLGGMGSQIGIVLAALLLVGLPEWFREL-- 378 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 A+ L++L + LL R P+ L Sbjct: 379 -------------QQFRMLAFGGAMVLIMLWKPAGLLSTREPTIRL 411 >gi|167571774|ref|ZP_02364648.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding protein [Burkholderia oklahomensis C6786] Length = 594 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 118/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVVLFALPALPGAVRVPEYWITLLNYIGLYAIVAIGLVMLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ L + YG S WL + ++ +++G +++ G +L + T+ Sbjct: 69 GIGAYATAYLTTAYGASPWLGLIAGIALTALVALVLGAVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G T+ + +YYV+ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALTVFGQTLDT--------------GRSLYYVIWVVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + +++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTGWMRVAIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG+ + I+ + + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVAHVWGAVLGAVIVTVLQDNLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|319792077|ref|YP_004153717.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315594540|gb|ADU35606.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 402 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 95/358 (26%), Positives = 166/358 (46%), Gaps = 17/358 (4%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K K L L + +L L L + L+YV+ A GL+IVVG GLL L Sbjct: 2 KNSKNLALYVIGAIAVLALPLLLQMQGNAWVRIADIALLYVLLALGLNIVVGYAGLLDLG 61 Query: 70 CVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLP 113 V +A+GAY + ++GS + S+ ++IP++ +++G G+++G P Sbjct: 62 YVAFFAVGAYLFALMGSSHLTETFPWFAQMFPNGLHTSLLIVIPLALVVAGVLGVLLGAP 121 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 +LK RGDYLAI TL EI + L N G + + L + ++F Sbjct: 122 TLKLRGDYLAIVTLGFGEIIRVFLNNLDQPVNITNGPKGITAIDSIKFWGLDLGKAWKFD 181 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + YY+ L + + I L+ + I AW IR+++ A ++ KL Sbjct: 182 GFTISSVSLYYYLFLALVIATIIISHRLQVSRIGRAWMAIREDEIAAKAMGINTRNMKLL 241 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF + ++F G++GA FAA + +SP+ F E+++++++V+LGG+ L + +L Sbjct: 242 AFGMGASFGGVSGAMFAAFQGFVSPESFSLMESVMIVAMVVLGGIGHLPGVILGAVLLAA 301 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + E+ + SL ++ + +A+ +++LMR L L R Sbjct: 302 LPEVLRYVAGP-LQSLTDGRLDASILRQLFIALAMIVIMLMRPRGLWPSPEHGKTLAR 358 >gi|187477581|ref|YP_785605.1| branched-chain amino acid ABC transporter ATP-binding/permease [Bordetella avium 197N] gi|115422167|emb|CAJ48691.1| high-affinity branched-chain amino acid transport ATP-binding protein LivG [Bordetella avium 197N] Length = 612 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 120/325 (36%), Gaps = 22/325 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + + +LL + ++ + I + + A GL ++ G GL S + Sbjct: 4 ILLIAFIVLLAALPALPVTPEFWITQLNYIGLASLVALGLVLLTGVGGLTSFGQAAFVGM 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ L ++YG S WL + +I+GA +G+ +L+ G YL + T+ + Sbjct: 64 GAYTTAYLTTQYGTSPWLALVAGLIITGALAYFLGVITLRLSGHYLPLGTIAWGLSLFYL 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + GI + L G ++ +YY++ L+ Sbjct: 124 FGNLDFL-GKHDGIAGIEPLSIFGVSLADGRH--------------IYYLIWVWVLLALW 168 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L + A R ++ S+ K F ++ ++G +A + + Sbjct: 169 ATRNLLSSRPGRAIRALKSGAGMAESMGVNTARYKTIIFVWAALLACVSGWLYAHMQRAV 228 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F + I + + ++GG + +A+++G+ + N+ F Sbjct: 229 SPSPFGLNYGIEYLFMAVIGGAAHVWGALLGSAVILGLKDQLQNWLPKLLNTDTNF---- 284 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L++ S+ L Sbjct: 285 ---ELIAFGVLMILMLQYASNGLWP 306 >gi|269127070|ref|YP_003300440.1| inner-membrane translocator [Thermomonospora curvata DSM 43183] gi|268312028|gb|ACY98402.1| inner-membrane translocator [Thermomonospora curvata DSM 43183] Length = 393 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 76/316 (24%), Positives = 139/316 (43%), Gaps = 19/316 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + I ++++ A GL+IVVG GLL L V +A+G Y+ I G++YG + W + Sbjct: 67 SDWATVLFYPIGVFILLAIGLNIVVGQAGLLDLGYVAFFAVGGYTMAIFGTKYGWNFWEI 126 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + V ++S G+I+G P+L+ RGDYLAI TL EI + + + + + Sbjct: 127 LIVGVVLSAISGLILGAPTLRLRGDYLAIVTLGFGEIVRITANNSEYVNGPRGIAGIPHP 186 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + V+ YY+L+ + L+ L ++ + AW IR+ Sbjct: 187 PSLSEVEIFGVQPLKY----GVLDPRPYYYLLVALIVLTIIFAKRLEKSRVGRAWAAIRE 242 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + KL+AFA+ +A G G +A+ I P+ F F + +++ V+L Sbjct: 243 DEDAAELMGVPTFRFKLAAFAIGAAIGGATGVVWASKVISIIPNNFPFILSATILAAVVL 302 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ + ++ + E G+ Y + AL ++ +R Sbjct: 303 GGSGNIPGVMLGAFLVAWLPERFRGLEDY---------------RVLIFGAALVAMMALR 347 Query: 336 SHSLLRLRTPSNFLER 351 +L R L Sbjct: 348 PEGILPSRQRKAELAE 363 >gi|119896604|ref|YP_931817.1| ABC transporter ATP-binding/permease [Azoarcus sp. BH72] gi|119669017|emb|CAL92930.1| ABC transporter ATP-binding/permease protein [Azoarcus sp. BH72] Length = 597 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 109/332 (32%), Gaps = 31/332 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L L + + ++ I +Y M A GL ++ G GL S +GA Sbjct: 6 LVLGVFLALLAVAPLVLPPFYVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGLGA 65 Query: 79 YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 Y+ + + G S WL + V + +++G +LK G YL + T+ Sbjct: 66 YTTALLCTATELPGWLAWAGGSPWLALVVGLAFTAVVAVVLGSLTLKLSGHYLPLGTIAW 125 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + + G G+ + G + +YY++ Sbjct: 126 GISLYFLFGTMESL-GGHTGLTGIPPISIFGWVLDQGEE--------------IYYLIWV 170 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L + A R ++ ++ +++ F +++ +G + Sbjct: 171 FLLAAVFTTQNLLDSREGRAIRALKGGMVMAEAMGVDTSRSRMIIFVIAALHACASGWLY 230 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + ++P F I + + ++GG + ++ + + + F Sbjct: 231 AHMQRFVNPTPFGLHIGIEYLFMAVVGGAGHVWGALVGAGVITVLKQWLQDLLPRLFGQS 290 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F + + + +V+ L Sbjct: 291 GNF-------EVIVFGLMMVIVLQRARDGLWP 315 >gi|330826230|ref|YP_004389533.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|329311602|gb|AEB86017.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 358 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 88/329 (26%), Positives = 155/329 (47%), Gaps = 17/329 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88 + L+YVM A GL+IVVG GLL L V YA+GAY + +L S + Sbjct: 29 WVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGAYMFGLLASPHLTENFAWFAQ 88 Query: 89 ------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 LS+W +IP++ +++ G+++G+P LK RGDYLAI TL EI + + Sbjct: 89 HFPDGMHLSLWAVIPLALVLAATTGVLLGIPVLKLRGDYLAIVTLGFGEIIRIFMNNLDH 148 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 N G ++ + L R + YY+ L + ++ I L+ Sbjct: 149 PVNLTNGPKGLGQIDSVKVFGLDLGRRLELFGYDINSVTLYYYLFLALVLVTIVICYRLQ 208 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + I AW IR+++ A ++ KL AF + ++F G+AGA F A + +SP+ F Sbjct: 209 DSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASFGGVAGAMFGAFQGFVSPESFS 268 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 E+++++++V+LGG+ + + +L + E+ + ++ ++ Sbjct: 269 LMESVMIVAMVVLGGLGHIPGVILGAVLLSALPEVLRYVAGP-LQAMTDGRLDASILRQL 327 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351 L+ +A+ +V+L+R L L R Sbjct: 328 LIALAMIIVMLLRPRGLWPSPEHGKSLAR 356 >gi|167838439|ref|ZP_02465298.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding protein [Burkholderia thailandensis MSMB43] Length = 594 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 117/327 (35%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVVLFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ L + +G S WL + +++ +++G +++ G +L + T+ Sbjct: 69 GIGAYATAYLTTAHGASPWLGLIAGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALAVF--------------GQALDTGRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + +++ F ++ ++G +A + Sbjct: 174 VVSVQNLLNSRPGRAIRALRGGSLMAEAMGVNTGWMRVAIFVHAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVAHVWGALLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|152970836|ref|YP_001335945.1| high-affinity branched-chain amino acid transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895343|ref|YP_002920078.1| ABC-type high-affinity branched-chain amino acid transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|150955685|gb|ABR77715.1| high-affinity branched-chain amino acid transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547660|dbj|BAH64011.1| ABC-type high-affinity branched-chain amino acid transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 428 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 161/339 (47%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L+ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 101 IIPLLVGLAIVFPFLATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P+ A+++ G ++G P L+ GDYLAI TL EI + +L Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V F R + FF + + IF+Y VL + Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRAKDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + L R I AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL G + Y Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + ++++ R L+R L + Sbjct: 393 -------RVLLFGVLMVMMMIWRPRGLVRTSRSGVALRK 424 >gi|297566883|ref|YP_003685855.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] gi|296851332|gb|ADH64347.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] Length = 463 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 91/365 (24%), Positives = 153/365 (41%), Gaps = 28/365 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + +LL A + ++ +GIQI IY A GL++VVG GLL L + Sbjct: 94 WIKGLLGAAILLISIPIAGFANSFLFELGIQIGIYAAMALGLNVVVGMAGLLDLGYAAFF 153 Query: 75 AIGAYSYVILGSRYGLSI------------WLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 AIGAY++ I GS +L + ++ + + G+++GLP+L+ RGDYL Sbjct: 154 AIGAYTWAIFGSPQANHFTAGGFPLNGNFFYLFMVLAVITTAITGLLIGLPALRLRGDYL 213 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYE 180 AI TL + E+ + + N G + + + Y+ Sbjct: 214 AIVTLGLGEVVRVLANNLDHPVNLTNGPQGITPVERPPIDWFRSLMGSIGIHLDAKTDYQ 273 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 +F Y ++L + + + + L + AW IR+++ A ++ ++ KL AFA +A Sbjct: 274 LFFYLLVLVVIGIVIMVNVNLGNSRFGRAWVAIREDETAAKAMGIPMLGTKLLAFATGAA 333 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G G FAA R +SP+ F +I ++ +V+LGGM S+ + A L + Sbjct: 334 FSGAMGVIFAAQRTFVSPESFTLLASITILGMVVLGGMGSIPGVILGAAALTILNIDILK 393 Query: 301 MNFYYFNSL--------------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 Y NSL L + + L L+++ R L+ R Sbjct: 394 SFSEYLNSLRQSGATVLGFNLANLPNQFEPAKYERLVFGVVLILMMIFRPEGLIPERRHK 453 Query: 347 NFLER 351 E Sbjct: 454 LEAEE 458 >gi|119718322|ref|YP_925287.1| ABC transporter related [Nocardioides sp. JS614] gi|119538983|gb|ABL83600.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Nocardioides sp. JS614] Length = 582 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 65/330 (19%), Positives = 123/330 (37%), Gaps = 30/330 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L + +G Q Y + LI M A L++ +G GLLS A+ Y+ Sbjct: 1 MLALWPQIAVGFGPQQSYYVDLATTALILTMLAISLNLAMGIAGLLSFVHTGLLAVAGYT 60 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 I R+G++ WL I + +++ +++ L S + Y + TL + ++ +W Sbjct: 61 LGISALRWGVNPWLGILLGVVVTVLFCILISLVSARATNIYWGLITLSFDLVLIQVIEQW 120 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G G+ R G + + YY+ L M + Sbjct: 121 GSVTGGFNGLPGVPRPQLNGAPLDTQ---------------SFYYLCLVMAIGCYLVTRN 165 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L ++ + +R + + SL + A+L AFA++ A G +GA FA + ISP++ Sbjct: 166 LVKSPAGRGFHALRQSPETASSLGINVPAARLLAFAIAGALAGFSGALFAMHLNFISPEV 225 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + + + LGG +L ++ V G Sbjct: 226 ADQGPQLPLFIAIFLGGFGTLLGPVLGMVVVTAVQHELRG---------------SGENA 270 Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L IL+ ++ + F Sbjct: 271 QLILGLFLLACILILPKGIVGTWMSTRFGR 300 >gi|313126790|ref|YP_004037060.1| ABC branched-chain amino acid transporter, permease component [Halogeometricum borinquense DSM 11551] gi|312293155|gb|ADQ67615.1| ABC-type branched-chain amino acid transport system, permease component [Halogeometricum borinquense DSM 11551] Length = 364 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 137/347 (39%), Gaps = 22/347 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R +L +A + +LL + ++ S+ +YV+ GL++ G GL Sbjct: 24 VRSQSERNVLAGVAGIALVLLLATVLGVVRLPFLLSLLSLAGMYVLLTLGLNVQWGYAGL 83 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 ++ + + IGAYS +L + + ++S +++G+P+L+ R D Sbjct: 84 INFSVAAFWGIGAYSAALLSAPTSPLGLGLHPIFGFFAAIVVSAILAVLIGIPTLRLRED 143 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLAIA+L ++E+ + I++ + T G +GI L F S + Sbjct: 144 YLAIASLGLAEVVRRIILNEEQWTAGSSGISGIPEL---------------FESLPLTQN 188 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 +++G+ L + + R+ RTIR ++ +L K+ AF + S Sbjct: 189 ATNLAIIVGLIGLVYVFLRRVHRSPWGRVLRTIRSDEDLAKALGKNTYAFKMQAFVLGSI 248 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 + +AGAF+ I P + VILGG S A +I + E Sbjct: 249 IMAIAGAFYVHMNLYIDPSDLIPLTTFYIWVAVILGGTGSNRGAVLGAATVIAIREGTRF 308 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 +N + + + + LV+ +R LL R Sbjct: 309 LND--VQAFTALGLDLAPLRLLFVGVLIILVVRVRPEGLLPPRDELI 353 >gi|146306417|ref|YP_001186882.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas mendocina ymp] gi|145574618|gb|ABP84150.1| L-leucine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-valine ABC transporter membrane protein [Pseudomonas mendocina ymp] Length = 423 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 26/342 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ +++ + + + + ILIYVM GL+IVVG GLL L V YA+GAY Sbjct: 98 IILAMVMVALVWPFFASRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAY 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY IL +GL W+ +P++ M++ G ++G P L+ RGDYLAI TL EI + +L Sbjct: 158 SYAILAHYFGLGFWICLPLAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRN 217 Query: 140 WKPITNGKAGIYVAD----------RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 T G G+ +A+ + + + FF + IF+Y + L Sbjct: 218 MTEYTGGPNGLSIANENKPTLFGLSFERRVPADMPTFHGFFEIAYNSQYKVIFLYLIALL 277 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ ++ L R I AW +R+++ A +L KLSAF + ++ G AG+FF Sbjct: 278 LVLLTLFLVNRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTIGASLAGFAGSFF 337 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +++ + E+ Sbjct: 338 AARQGLVTPESFTFIESAMILAIVVLGGMGSQLGVILAAIVMVMLQEM------------ 385 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + +++ R LL ++ P L+R Sbjct: 386 ----RELSEYRMLFFGLVMIFMMIWRPQGLLPMQRPHLELKR 423 >gi|221067281|ref|ZP_03543386.1| inner-membrane translocator [Comamonas testosteroni KF-1] gi|220712304|gb|EED67672.1| inner-membrane translocator [Comamonas testosteroni KF-1] Length = 412 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 98/341 (28%), Positives = 162/341 (47%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V++ +L+ + + + +IYVM GL++VVG GLL L V YA+GA Sbjct: 86 VVIFVVLMMAASWPFFAGRNAVDIATLAMIYVMLGLGLNVVVGFAGLLDLGFVGFYAVGA 145 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L G + W +P++ S G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 146 YTYALLFHWAGWTFWEALPLAGAASALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLV 205 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 T G GI + LG + + +FF + + I +Y + L Sbjct: 206 NLTSFTGGPDGISSIPKPSVLGLPMTRTPLTEDGTTFHQFFGMEFNSMHMVIALYLMALL 265 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ I L R I AW +R+++ A SL + KLSAF + + F G GAFF Sbjct: 266 LAMVTLFISNRLIRMPIGRAWEALREDEIACRSLGLNPMKIKLSAFTLGAMFAGFGGAFF 325 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A IL + EL + Y Sbjct: 326 AARQGIVNPESFTFIESALILAIVVLGGMGSQLGVIVAAIILTVLPELAREFSEY----- 380 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + L+++ R LL ++ ++ Sbjct: 381 ----------RMLIFGLVMILMMIWRPQGLLPMKRHQVEVK 411 >gi|316935426|ref|YP_004110408.1| ABC transporter-like protein [Rhodopseudomonas palustris DX-1] gi|315603140|gb|ADU45675.1| ABC transporter related protein [Rhodopseudomonas palustris DX-1] Length = 595 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 112/329 (34%), Gaps = 19/329 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L ++ LL L + Y + +I+I F L +++G GL+S + Sbjct: 7 LVVVLFFTVLLGCLLALPFVAGPYPVKLMTRIVIIATFVLSLDLLIGVTGLVSFGHAAFF 66 Query: 75 AIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 GAY+ + ++ + + + G +++G + RG Y + TL ++ Sbjct: 67 GCGAYAVYFVSPEAEAANVIVALGAGLVAGGVAALVIGAFATLTRGFYFIMVTLAAGQML 126 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + YYV + + Sbjct: 127 FALFHDTDIAKGSDGAYINVKP----------ELTLGGLMLLDFSDRRQFYYVCIVVLIA 176 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++L L R+ + IR N+ SL KL+AF ++ G+AGA FA+ Sbjct: 177 AYGLLLALVRSPFGRVLQGIRANEVRMSSLGYDTYRYKLAAFTIAGMVAGLAGALFASID 236 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ++PD+ + ++ + I +V+LGG +L + EL + Sbjct: 237 GFVTPDLLNWHQSGLAIMMVVLGGAGTLFGPILGALAYSSLEELL--------KTASIVG 288 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L +LM L L Sbjct: 289 SFVADHWRLGTGATLIAAVLMSPDGLAGL 317 >gi|237814360|ref|YP_002898811.1| ABC transporter, hydrophobic amino acid uptake transporter [Burkholderia pseudomallei MSHR346] gi|237503072|gb|ACQ95390.1| ABC transporter, hydrophobic amino acid uptake transporter [Burkholderia pseudomallei MSHR346] Length = 594 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V +L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVRNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|326318081|ref|YP_004235753.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374917|gb|ADX47186.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 358 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 92/339 (27%), Positives = 156/339 (46%), Gaps = 17/339 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL L L + L+YVM A GL+IVVG GLL L V YA+GA Sbjct: 9 IIGAIALLVLPLILQSFGNAWVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGA 68 Query: 79 YSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 Y + ++ S + S+WL+IP++A+++ G ++G P+LK RGDYL Sbjct: 69 YLFGLMASPHLSDTFASFAAMFPNGLHTSLWLVIPLAALVAAIFGALLGAPTLKLRGDYL 128 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + L N G ++ + L R + Sbjct: 129 AIVTLGFGEIIRIFLNNLDHPINLTNGPKGIGQIDSVKIFGLDLGRRLELFGYDINSVTL 188 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY+ L + S I L+ + I AW IR+++ A ++ KL AF + ++F Sbjct: 189 YYYLFLILVVFSVIICYRLQDSRIGRAWMAIREDEIAAKAMGINTRNLKLLAFGMGASFG 248 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G++GA F A + +SP+ F E+++++++V+LGG+ + + +L + E+ + Sbjct: 249 GVSGAMFGAFQGFVSPESFSLMESVMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYVA 308 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 S+ + L+ +A+ +++LMR L Sbjct: 309 GP-LQSMTDGRLDSAILRQLLIALAMIIIMLMRPRGLWP 346 >gi|319761906|ref|YP_004125843.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|317116467|gb|ADU98955.1| inner-membrane translocator [Alicycliphilus denitrificans BC] Length = 358 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 17/319 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88 + L+YVM A GL+IVVG GLL L V YA+GAY + +L S + Sbjct: 29 WVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGAYMFGLLASPHLTENFAWFAQ 88 Query: 89 ------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 LS+W +IP++ +++ G+++G+P LK RGDYLAI TL EI + + Sbjct: 89 HFPDGMHLSLWAVIPLALVLAATTGVLLGIPVLKLRGDYLAIVTLGFGEIIRIFMNNLDH 148 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 N G ++ + L R + YY+ L + ++ I L+ Sbjct: 149 PVNLTNGPKGLGQIDSVKVFGLDLGRRLELFGYDINSVTLYYYLFLALVLVTIVICYRLQ 208 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + I AW IR+++ A ++ KL AF + ++F G+AGA F A + +SP+ F Sbjct: 209 DSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASFGGVAGAMFGAFQGFVSPESFS 268 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 E+++++++V+LGG+ + + +L + E+ + ++ ++ Sbjct: 269 LMESVMIVAMVVLGGLGHIPGVILGAVLLSALPEVLRYVAGP-LQAMTDGRLDASILRQL 327 Query: 323 LMVIALFLVILMRSHSLLR 341 L+ +A+ +V+L+R L Sbjct: 328 LIALAMIIVMLLRPRGLWP 346 >gi|317123525|ref|YP_004097637.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Intrasporangium calvum DSM 43043] gi|315587613|gb|ADU46910.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Intrasporangium calvum DSM 43043] Length = 352 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 82/308 (26%), Positives = 150/308 (48%), Gaps = 12/308 (3%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 KY + ILI V+ A GL+I+VG G +SL A+GA++ VI+ R G+ Sbjct: 39 PYVLDKYWLGIANVILISVIGAVGLNILVGFTGQISLGQGGFLAVGAFTSVIISDRAGVP 98 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + I ++ +++ A G GLP+L+ +G YLAIATL EI ++ +W+ +T G Sbjct: 99 VPISIAIAVLMTAAVGAFFGLPALRLKGLYLAIATLASQEIIMFVVRRWEWLTEG----- 153 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 G + F ++E+ Y++LL + L+ + L RT + ++ Sbjct: 154 -------KGYLEVERLHVGGFQVERQMFEVQWYWILLALATLAVVVARNLFRTTLGRSFM 206 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RD A ++ I AK++AFAVSS F+G+AGA A + ++ + F +++ ++ Sbjct: 207 AVRDQDIAAEAIGVNITRAKVTAFAVSSGFVGLAGALTAHYTETVTWERFTLDVSVLYLA 266 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 ++I+GG+ S++ + + L + +SL + IA+ + Sbjct: 267 MIIVGGLGSIAGAVYGAIFMGLLPALLTELVDVLGSSLPSLSDQLPALRNAVFGIAIIVF 326 Query: 332 ILMRSHSL 339 +L+ L Sbjct: 327 LLVEPRGL 334 >gi|145589908|ref|YP_001156505.1| inner-membrane translocator [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048314|gb|ABP34941.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 363 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 87/334 (26%), Positives = 155/334 (46%), Gaps = 17/334 (5%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 ++ Y + L+YV+ A GL++VVG GLL L + YA+GAYS+ +L S Sbjct: 27 PWVVGAAGGNYWVRVLDFALLYVVLALGLNVVVGFAGLLDLGYIAFYALGAYSFALLASP 86 Query: 88 Y----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + S W++ + +++ G+I+GLP+L+ RGDYLAI TL E Sbjct: 87 HLPQQFEAVAAAFPEGMHFSPWMVAIFAIVLAALFGVILGLPTLQLRGDYLAIVTLGFGE 146 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + + N G ++ L S + + ++Y+ L + Sbjct: 147 IIRIFMNNLDRPLNLTNGPKGITKIDPLQVFGISFAKTLDLGFVKIPSLYLVFYLFLVLA 206 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 A I + L+ + I AW IR+++ A ++ KL AFA+ ++F G+AG FAA Sbjct: 207 TTVAFICMHLQNSRIGRAWVAIREDEIAAKAMGINTRNMKLLAFAIGASFAGVAGVLFAA 266 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + +SP+ F E+I+V+++V+LGG+ + + +L E+ G+ +L Sbjct: 267 FQGFVSPESFTLWESIVVLAMVVLGGIGHIPGVILGAVVLAVFPEVLRGIAEPLQKALFG 326 Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + +AL L++L R + + + Sbjct: 327 HVIVDVEVIRQLIYGLALILIMLYRPGGIWQKQE 360 >gi|42527866|ref|NP_972964.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Treponema denticola ATCC 35405] gi|41818694|gb|AAS12883.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Treponema denticola ATCC 35405] Length = 339 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 138/325 (42%), Gaps = 29/325 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + ++ +L + Y + I IY + L++V G +G L + + Sbjct: 20 IFVLIILAVLAISFPIFVDNNYYLGIAIMFFIYSILTLSLNLVTGYVGFTLLGQAAFFGL 79 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY ILG+R+ + + +++ +G G ++ LP+L+ RG Y AI TL SEI + I Sbjct: 80 GAYVAAILGTRFQVDFIIGCIAASLFAGIFGAMLALPTLRIRGRYFAIVTLGFSEIMRMI 139 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + W +T G GI + G S F YYV L + + Sbjct: 140 ELNWMEMTRGPQGISRIPGIVIFGKEFDSYR--------------FKYYVGLVLLIFALY 185 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 II + + A R I+D+ A ++ + + F++S+ GMAGA++A I Sbjct: 186 IINSILNSKHGRAVRAIKDDDLAAGAIGVNVYKYTVIIFSISAGIAGMAGAYYAHYMSFI 245 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ F F ++I+++S+ I GG+ SL L + E ++ Y Sbjct: 246 DPNAFNFEQSILILSMAIFGGLGSLPGSILGALALTILPEALRFLSDY------------ 293 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L L+++ + ++ Sbjct: 294 ---RQIIYGLILVLIVIFKPSGVMG 315 >gi|157363936|ref|YP_001470703.1| inner-membrane translocator [Thermotoga lettingae TMO] gi|157314540|gb|ABV33639.1| inner-membrane translocator [Thermotoga lettingae TMO] Length = 561 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 126/308 (40%), Gaps = 36/308 (11%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 KS +I ++ +IY M GL++++G G +S+ +IGAY+ IL + + + Sbjct: 17 FKSSTFILTIMNLTMIYTMAGMGLNLIMGYTGQVSIGHAAFMSIGAYTSAILTQKLSIPL 76 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 L + + I G G+ +G P+L+ G YLAIAT+ + + + T G GI Sbjct: 77 PLSLICATAIGGIFGLALGFPALRLAGFYLAIATMGFGIAIEQLFGALENFTGGHIGIRN 136 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 + + E+ YY++L + ++ L A + Sbjct: 137 I---------------------TKLGSELESYYIILILIIVAFYFFNKLVNGKTGRALKA 175 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR+N+ L + K+ +F + SA+ G+AGA +A ISP F +++ ++++ Sbjct: 176 IRENELVANVLGVNLTHYKVLSFVIGSAYAGLAGALYAHVIGYISPADFGLGKSLELLAV 235 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V++GGM +S + + F + L LV+ Sbjct: 236 VVIGGMGMVSGPIFGAVFYTVLPFFLSRVGFSLS---------------IIFGSVLVLVV 280 Query: 333 LMRSHSLL 340 L + Sbjct: 281 LFMPRGIA 288 >gi|289772267|ref|ZP_06531645.1| branched chain amino acid transport permease [Streptomyces lividans TK24] gi|289702466|gb|EFD69895.1| branched chain amino acid transport permease [Streptomyces lividans TK24] Length = 611 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 78/347 (22%), Positives = 135/347 (38%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V + T+S ++G+ ILI+ A GL+IVVG GLL L V +G Sbjct: 267 ITVCGGFIAAACFPFTQSDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 326 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ L W + V A S G+++G P+L+ RGDYLAI TL E Sbjct: 327 AYAASMVSGSPSSPFDLHLPFWAAVLVGAAASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 386 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ + G + L L + + ++L Sbjct: 387 IFRITANNLDGTSGPDVTNGSNGISSIPDLKILGFDLGVSHDMGGFTLGRFANYFLLMLI 446 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + I AW IR+++ A ++ KL AFAV ++ G+AG Sbjct: 447 ITAVVVLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGASLAGLAGTVQ 506 Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A ++P+ + + +++ V+LGGM +++ A+L + ++ Y Sbjct: 507 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLDDY 566 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +AL L++ R L+ R Sbjct: 567 ---------------QLLAFGLALVLLMRFRPEGLIANRRRKLEFHE 598 >gi|256788375|ref|ZP_05526806.1| branched chain amino acid transport permease [Streptomyces lividans TK24] Length = 608 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 78/347 (22%), Positives = 135/347 (38%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V + T+S ++G+ ILI+ A GL+IVVG GLL L V +G Sbjct: 264 ITVCGGFIAAACFPFTQSDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 323 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ L W + V A S G+++G P+L+ RGDYLAI TL E Sbjct: 324 AYAASMVSGSPSSPFDLHLPFWAAVLVGAAASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 383 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ + G + L L + + ++L Sbjct: 384 IFRITANNLDGTSGPDVTNGSNGISSIPDLKILGFDLGVSHDMGGFTLGRFANYFLLMLI 443 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + I AW IR+++ A ++ KL AFAV ++ G+AG Sbjct: 444 ITAVVVLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGASLAGLAGTVQ 503 Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A ++P+ + + +++ V+LGGM +++ A+L + ++ Y Sbjct: 504 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLDDY 563 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +AL L++ R L+ R Sbjct: 564 ---------------QLLAFGLALVLLMRFRPEGLIANRRRKLEFHE 595 >gi|119898793|ref|YP_934006.1| branched-chain amino acid ABC transporter [Azoarcus sp. BH72] gi|119671206|emb|CAL95119.1| probable branched-chain amino acid ABC transporter [Azoarcus sp. BH72] Length = 597 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 109/332 (32%), Gaps = 31/332 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L L + + ++ I +Y M A GL ++ G GL S +GA Sbjct: 6 LVLGVFLALLAVAPLVLPPFYVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGLGA 65 Query: 79 YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 Y+ + + G S WL + V + +++G +LK G YL + T+ Sbjct: 66 YTTALLCTATELPAWLAWAGGSPWLALVVGLAFTAVVAVVLGSLTLKLSGHYLPLGTIAW 125 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + + G G+ + G + +YY++ Sbjct: 126 GISLYFLFGTMESL-GGHTGLTGIPPISIFGWVLDQGEE--------------IYYLIWV 170 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L + A R ++ ++ +++ F +++ +G + Sbjct: 171 FLLAAVFTTQNLLDSREGRAIRALKGGMVMAEAMGVDTSRSRMIIFVIAALHACASGWLY 230 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + ++P F I + + ++GG + ++ + + + F Sbjct: 231 AHMQRFVNPTPFGLHIGIEYLFMAVVGGAGHVWGALVGAGVITVLKQWLQDLLPRLFGQS 290 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F + + + +V+ L Sbjct: 291 GNF-------EVIVFGLMMVIVLQRARDGLWP 315 >gi|21220492|ref|NP_626271.1| branched chain amino acid transport permease [Streptomyces coelicolor A3(2)] gi|5689903|emb|CAB52066.1| putative branched chain amino acid transport permease [Streptomyces coelicolor A3(2)] Length = 608 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 78/347 (22%), Positives = 135/347 (38%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V + T+S ++G+ ILI+ A GL+IVVG GLL L V +G Sbjct: 264 ITVCGGFIAAACFPFTQSDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 323 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ L W + V A S G+++G P+L+ RGDYLAI TL E Sbjct: 324 AYAASMVSGSPSSPFDLHLPFWAAVLVGAAASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 383 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ + G + L L + + ++L Sbjct: 384 IFRITANNLDGTSGPDVTNGSNGISSIPDLKILGFDLGVSHDMGGFTLGRFANYFLLMLI 443 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + I AW IR+++ A ++ KL AFAV ++ G+AG Sbjct: 444 ITAVVVLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGASLAGLAGTVQ 503 Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A ++P+ + + +++ V+LGGM +++ A+L + ++ Y Sbjct: 504 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLDDY 563 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +AL L++ R L+ R Sbjct: 564 ---------------QLLAFGLALVLLMRFRPEGLIANRRRKLEFHE 595 >gi|27382944|ref|NP_774473.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium japonicum USDA 110] gi|27356117|dbj|BAC53098.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium japonicum USDA 110] Length = 589 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 122/323 (37%), Gaps = 22/323 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V+ L++ + + I + + A GL ++ G GL S GA Sbjct: 7 ILVFALVMAAIPFVPGMPPFWIVLLDNIGLAALVAMGLVLLTGVGGLTSFGQAAFVGFGA 66 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L + YGLS WL +P+S ++SG+ +++GL +++ G YL + TL + Sbjct: 67 YTTAVLSTSYGLSPWLTLPLSLVVSGSLAVLLGLVTVRLSGHYLPLGTLAWGLGLFYLFS 126 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K + + GI L + S +YY + LSA + Sbjct: 127 KLEFL-GRNDGISAIPPLSIGAFKMLS--------------PGSIYYAIWVAVILSALLT 171 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L + A R +R A + AKL F ++ G++G +A + ++P Sbjct: 172 MNLLDSRTGRAIRALRRGHVAAEAFGVHTPRAKLLVFIHAAVLAGLSGWLYAHLQRAVNP 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F I + I ++GG + AI++ + E+ Sbjct: 232 TPFGAQAGIEYLFIAVVGGAGYVWGGVLGAAIVVVLKEVLQSYLPLLLPG-------SGQ 284 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 T + I L ++ + + Sbjct: 285 VETIVFGIMLVALLQLAPGGVWP 307 >gi|217423937|ref|ZP_03455437.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 576] gi|217393000|gb|EEC33022.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 576] Length = 594 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V +L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVRNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|256830267|ref|YP_003158995.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256579443|gb|ACU90579.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 407 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 26/325 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L+ + Y ++ I L+YV+ GL+I+VG GLL L YAIGAYSY Sbjct: 93 ALFLVIFLVTPWLVTTYQTNILISFLLYVVLGLGLNIIVGVAGLLFLGHAAFYAIGAYSY 152 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L +GL W+ +P+ +I+ G+ + P L+ RGDYLAI TL EI + +L W Sbjct: 153 ALLNQYFGLGFWVALPLGGVIAALAGIALAFPVLRLRGDYLAIVTLGFGEIVRLVLENWS 212 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G +GI R S I++YY++L + ++ + L Sbjct: 213 DLTGGPSGISNIPRPGLFDA-----------TLSVADANIYIYYIVLALAIITIIAVTRL 261 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + I A + +R+++ A ++ + K+ AF + +A+ G AG FAA I+P F Sbjct: 262 KDSRIGRALQALREDEIACEAMGIDRVGVKVMAFGLGTAWAGFAGVIFAAKTTFINPASF 321 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F E+ I++SIV+LGGM S + +A L+ + E + Y Sbjct: 322 TFFESAIILSIVVLGGMGSNLGVILGSAFLVLLPEYLRAFSEY---------------RM 366 Query: 322 TLMVIALFLVILMRSHSLLRLRTPS 346 L A+ L+++ R L+ + S Sbjct: 367 ILFATAMVLMMVFRPQGLIPAKGRS 391 >gi|167904866|ref|ZP_02492071.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei NCTC 13177] Length = 594 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V +L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|167847907|ref|ZP_02473415.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei B7210] gi|254298689|ref|ZP_04966140.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 406e] gi|157808494|gb|EDO85664.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 406e] Length = 594 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V +L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|126439203|ref|YP_001060977.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia pseudomallei 668] gi|126218696|gb|ABN82202.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 668] Length = 594 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGIVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|317486436|ref|ZP_07945263.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] gi|316922346|gb|EFV43605.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] Length = 414 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 92/324 (28%), Positives = 156/324 (48%), Gaps = 26/324 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 + + + + S Y ++ I LIY+M GL+IVVG G L L YA+GAY+Y Sbjct: 92 LIAVLMLVMPYISSMYQINIMISALIYIMLGLGLNIVVGLAGQLVLGYAAFYAVGAYTYG 151 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L + +GL W ++PV +++ G+++G P L+ +GDYLAI TL EI + +L W Sbjct: 152 LLNTYFGLGFWAVLPVGGIMAALFGLMLGFPVLRLKGDYLAIVTLGFGEIIRLVLENWTS 211 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ R F ++YY++L ++ ++ L+ Sbjct: 212 VTKGSFGLSNLSRPS-----------LFGMEMGVTEATNYIYYIVLAAVVVTIIVVGRLK 260 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + I A + +R+++ A ++ + KLSAFA+ S + G AG FAA I+P F Sbjct: 261 NSRIGLALQALREDEIACEAMGIDLTKVKLSAFALGSCWAGFAGVIFAAKTTFINPASFT 320 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ +V+S+V+LGGM S+ + A AIL+ E + Y Sbjct: 321 FMESAMVLSMVVLGGMGSVLGVTIAAAILVLAPEYLRAFSEY---------------RML 365 Query: 323 LMVIALFLVILMRSHSLLRLRTPS 346 L + ++++ R L+ + Sbjct: 366 LFGAVMVIMMIYRPQGLISGEKRT 389 >gi|315122686|ref|YP_004063175.1| ABC transporter membrane spanning protein (branched chain amino acid) [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496088|gb|ADR52687.1| ABC transporter membrane spanning protein (branched chain amino acid) [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 353 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 235/349 (67%), Positives = 286/349 (81%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M F R+ KYDK L LA +YPL+LF K+QKYIDS+GIQ LIYVM AWGLS++ Sbjct: 1 MLAFLPRMKKYDKFLFCLATIYPLVLFFLFNTNKAQKYIDSIGIQALIYVMLAWGLSVIA 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 GS GL SLN V+AYA+GAY+YVILG+ YG S WLL+P+SA++SGACG+++GLPSLKFRGD Sbjct: 61 GSAGLFSLNYVVAYAVGAYTYVILGNNYGFSPWLLLPMSAILSGACGLVLGLPSLKFRGD 120 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLAIAT I+SEIF NILI+WKP+TNGKAG+Y+ADRL +LG +R ++RFFR+PSS V Y+ Sbjct: 121 YLAIATFIISEIFHNILIRWKPLTNGKAGLYIADRLMYLGADLRGILRFFRYPSSIVFYK 180 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 IFMYYV+L +CFLSA IIL LRRT++ NAWRTI+DNQ+AF S NTTIIF+KLSAF+ Sbjct: 181 IFMYYVVLFLCFLSAWIILRLRRTSMGNAWRTIKDNQRAFSSFNTTIIFSKLSAFSFGCM 240 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G+AG AASR +SPDMFK SENI +ISIVILGGMTSLS IA I+I +EL CG Sbjct: 241 FAGVAGGLLAASRGYVSPDMFKMSENIALISIVILGGMTSLSHIAWVALIMISGMELLCG 300 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 +NFYYFNS LKFDCSFNMRH+ LM+++LF VIL+RS+SL++LR PS FL Sbjct: 301 VNFYYFNSFLKFDCSFNMRHSVLMIVSLFFVILLRSYSLIKLRYPSPFL 349 >gi|326796763|ref|YP_004314583.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326547527|gb|ADZ92747.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 426 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 99/330 (30%), Positives = 157/330 (47%), Gaps = 22/330 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ ++ FL + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 99 IIPLTIVIAFLVPFIASKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGFVGFYAIGAY 158 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+++ G I+G P L+ GDYLAI TL EI + +L Sbjct: 159 GLALGYEHLGLGFWSMLPIAAIVAAIFGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLTN 218 Query: 140 WKPITNGKAGIYVADRLYFLGTT-------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W +T+G G+ +F FF S IF+Y +LL + Sbjct: 219 WTELTHGPNGMNAPLPTFFGMEFKRRASEGHVPFHEFFGLSYSSAYKYIFIYLILLLVVL 278 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + L + I AW +R+++ A SL + KLSAF + ++ G+AG FFA Sbjct: 279 GVLYVKKRLTQMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMIGASTGGLAGVFFATY 338 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L E+ Y Sbjct: 339 QGFVNPSSFTFFESALILAIVVLGGMGSTLGVVIAAFVLTVAPEMLREFADY-------- 390 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 I + L+++ + L+R+ Sbjct: 391 -------RVLAFGILMVLMMIWKPRGLVRM 413 >gi|300311115|ref|YP_003775207.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gi|300073900|gb|ADJ63299.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 655 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 16/289 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 LL + ++ + Y + ILIY + +GL IVVG G +SL + Sbjct: 5 ILLLSLLGIVALAGIPMVVHNPYYLHLIETILIYAILLFGLDIVVGYTGQVSLGHAGLFG 64 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IG+Y+ +L + G+ I++ +P + ++ G I+ LP+L+ G YLA+ TL I Q Sbjct: 65 IGSYAAGVLFFKLGMPIFVTVPAAIAVTAVFGAILALPALRVTGPYLAMVTLAFGTIIQI 124 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ + +T G GI + + E+ +Y++ + LS Sbjct: 125 LINEMTFLTEGPLGIKLQKP----------------MIGGDKMSEVQFFYLVAVLMVLSM 168 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ + ++ + A++ +RD+ A + ++ K+ AF +S+A G++GA +A S + Sbjct: 169 LVVHRILKSNLGRAFQALRDSPIASDCMGVSVYRYKVYAFIISAALAGLSGALYAYSEEY 228 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 ISP+ + F I+ + VI+GG S I++ + L + + Sbjct: 229 ISPNTYNFELTIMFLLAVIMGGRKSRIGSLIGALIVVMLPSLLSDIALF 277 >gi|296161988|ref|ZP_06844787.1| ABC transporter related protein [Burkholderia sp. Ch1-1] gi|295887732|gb|EFG67551.1| ABC transporter related protein [Burkholderia sp. Ch1-1] Length = 646 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 134/295 (45%), Gaps = 16/295 (5%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 Y + I+IY + +GL IVVG G +SL + +GAY+ +L + Sbjct: 18 VFPVLSGNPYYIHLLETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGVGAYTAGVLFFKL 77 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 G+ ++ P++ +++ G I+ LP+L+ G YLA+ TL I Q ++ + +TNG Sbjct: 78 GMPFFVTAPLAILVTAGFGAILALPALRVSGPYLAMVTLAFGTIIQILINEMDFLTNGPM 137 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ + + E+ Y+++ + S ++ + R+ + Sbjct: 138 GVKIPKPSFGGRPM----------------NEVEYYWLVAALLVASLIVVHRVLRSHLGR 181 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A+ +RD+ A + ++ K+ AF +S+ F G+AG ++ S ISP+ + F I+ Sbjct: 182 AFEALRDSPIASDCMGVSVYRYKVYAFVISAGFAGLAGCLYSYSEQYISPNTYNFELTIL 241 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + +I+GG + + +AI++ + +L ++ + + + L Sbjct: 242 FLLAIIMGGRKTRTGALLGSAIIVLLPKLLDDIDMFRTVASVLAAVVVIGAGVAL 296 >gi|330000403|ref|ZP_08303717.1| branched-chain amino acid ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|328538015|gb|EGF64188.1| branched-chain amino acid ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 428 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 161/339 (47%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L+ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 101 IIPLLVGLAIVFPFLATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P+ A+++ G ++G P L+ GDYLAI TL EI + +L Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V F R + FF + + IF+Y VL + Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRAKDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + L R I AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL G + Y Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + ++++ R L+R L + Sbjct: 393 -------RVLLFGVLMVMMMIWRPRGLVRTSRSGVALRK 424 >gi|76811743|ref|YP_331608.1| branched-chain amino acid ABC transporter permease/ATP-binding protein [Burkholderia pseudomallei 1710b] gi|126453842|ref|YP_001068277.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia pseudomallei 1106a] gi|167913144|ref|ZP_02500235.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 112] gi|242314336|ref|ZP_04813352.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 1106b] gi|254194717|ref|ZP_04901148.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei S13] gi|254260661|ref|ZP_04951715.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 1710a] gi|76581196|gb|ABA50671.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding protein [Burkholderia pseudomallei 1710b] gi|126227484|gb|ABN91024.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 1106a] gi|169651467|gb|EDS84160.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei S13] gi|242137575|gb|EES23977.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 1106b] gi|254219350|gb|EET08734.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 1710a] Length = 594 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|224367400|ref|YP_002601563.1| LivM1 [Desulfobacterium autotrophicum HRM2] gi|223690116|gb|ACN13399.1| LivM1 [Desulfobacterium autotrophicum HRM2] Length = 401 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 94/321 (29%), Positives = 156/321 (48%), Gaps = 26/321 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + L +F+ + Y S+ I LIYVM GL+IVVG GLL L V +A+GAY Sbjct: 92 ALVALGVFILVFPHLFSMYQTSIMISALIYVMLGLGLNIVVGLAGLLDLGYVAFFAVGAY 151 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY +L YG++ W+ +P+ +++G G+++G P L+ RGDYLAI TL EI + +L Sbjct: 152 SYALLNLTYGITFWVALPLGGLLAGCFGILLGYPVLRLRGDYLAIVTLGFGEIIRLVLEN 211 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W ++G +GI + F + I+++Y+L+ + + +I Sbjct: 212 WNEFSHGPSGIANIPKPS-----------LFGLDLTLDQKTIYLFYILVLLVLFTIFVIN 260 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L+ + I AW ++D++ A ++ KL AFA+ + + GM G FAA I+P Sbjct: 261 RLQDSRIGRAWVALKDDEIACQAMGIDKAKTKLRAFALGATWAGMGGVIFAAKTTFINPA 320 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F E++I++ V+LGGM S+ + +LI + E F Sbjct: 321 SFTIWESVIILCTVVLGGMGSILGVISGALLLILLPEYLR---------------DFGQF 365 Query: 320 HTTLMVIALFLVILMRSHSLL 340 I L L+++ R ++ Sbjct: 366 RMITFGIVLVLMMVFRPGGMI 386 >gi|146338074|ref|YP_001203122.1| putative branched-chain amino acid ABC transporter permease/ATP-binding protein [Bradyrhizobium sp. ORS278] gi|146190880|emb|CAL74885.1| ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter); putative branched-chain amino acid transport protein [Bradyrhizobium sp. ORS278] Length = 589 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 120/323 (37%), Gaps = 22/323 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +++ +L+ + + I + + A GL ++ G GL S GA Sbjct: 7 LIIFAVLVAAIPFIPGMPPFWIVLLDNIGLSALVAMGLVLLTGVGGLTSFGQAAFVGFGA 66 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L ++YG+S WL +P+S ++SG +++GL +++ G YL + TL + Sbjct: 67 YTTAVLSAQYGVSPWLTLPLSLLVSGVAAVLLGLVTVRLSGHYLPLGTLAWGLGLYYLFS 126 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K + G+ L + +Y+ + ++A + Sbjct: 127 KLAFL-GRNDGVSGIPPLSIGSLKMLD--------------PGTIYFAIWAAVLIAALLT 171 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L + A R +R A + AKL F ++ G++G +A ++P Sbjct: 172 MNLLDSRTGRAIRALRRGHIAAEAFGVYSPRAKLLVFIYAAVLAGLSGWLYAHFTRAVNP 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F I + + ++GG + AI++ + E+ + Sbjct: 232 TPFGAQAGIEYLFVAVVGGAGYVWGGVLGAAIVVILKEVLQSYLPLLLHGE-------GQ 284 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 T + I L ++ + L Sbjct: 285 LETIVFGILLVTLLQLAPTGLWP 307 >gi|15807924|ref|NP_285584.1| branched-chain amino acid ABC transporter ATP binding protein [Deinococcus radiodurans R1] gi|6460675|gb|AAF12380.1|AE001863_5 branched-chain amino acid ABC tranpsorter, ATP binding protein [Deinococcus radiodurans R1] Length = 587 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 113/327 (34%), Gaps = 22/327 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + + + + ++ I I + GL ++ G GL S +GA Sbjct: 7 LLAIIAAVLALVLPLVLPVFQVTLLTNIAIVSITVIGLVLLTGISGLTSFGQAAFMGVGA 66 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L ++YG S WL +P +++ A I+GL +L+ +G YL +AT+ + Sbjct: 67 YTTALLTTKYGWSPWLTLPAGMLLTAAVANILGLITLRMQGHYLPLATIAWGISLYYVFG 126 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + G GI + F G + F +F+ I Sbjct: 127 NTPAL-GGFTGIREIPPVSFFGRVLDQPREFAYLALAFLALTI--------------VAA 171 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 +L + A R +R + ++ F +S+ +AG +A + ++P Sbjct: 172 QFLLSSRFGRALRALRTGPVVAEAFGANTFALRVQVFVLSAVMASVAGWLYAHQQRFVNP 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F + I + + ++GG + ++ + E+ + Sbjct: 232 TPFGLNVGIEYLFMAVIGGSGYVWGGVAGAVLITLLREVLQDVLPRLLGE-------NTN 284 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 ++ I + L + L L Sbjct: 285 YEIVVLGILIILTLQFARRGLWPLIER 311 >gi|328953529|ref|YP_004370863.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] gi|328453853|gb|AEB09682.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] Length = 294 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 30/304 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y + I +Y++ A L++++G G +SL Y +GAYS ++ + L + Sbjct: 4 YFLHLAIISCLYIILALSLNLIIGYCGQVSLGHAAFYGLGAYSSALVAIHWHFPFLLALL 63 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + +++ G+ +G+P+L+ + DYLAI TL I +L+ IT G GI Sbjct: 64 TAMIVAALFGLSLGIPTLRLKDDYLAIVTLGFGVIIDLVLLNL-DITGGPDGITRIPAPT 122 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 R + + +++ L+ I L + A + IRD++ Sbjct: 123 MFDLNFR--------------LKGWYLMLVVLAVALTLLFIHRLVNSRHGRALKAIRDHE 168 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + K++ FA+S+ G+AG+ +A I+P+ F +I+++++V+LGG Sbjct: 169 ITANVMGINTAAYKIAIFALSAGLAGLAGSLYAHYITFINPESFGLHTSILILTMVVLGG 228 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 M S+ IL + E+ Y L ++++ R Sbjct: 229 MGSILGSVLGACILTALPEMLRRFADY---------------QDLAYGGLLIVMLIWRPQ 273 Query: 338 SLLR 341 LL Sbjct: 274 GLLG 277 >gi|84496563|ref|ZP_00995417.1| putative branched chain amino acid transport permease [Janibacter sp. HTCC2649] gi|84383331|gb|EAP99212.1| putative branched chain amino acid transport permease [Janibacter sp. HTCC2649] Length = 581 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 79/343 (23%), Positives = 133/343 (38%), Gaps = 23/343 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + + FLF S+ Q+LI+ A GL+IVVG GLL L + Sbjct: 233 VLMLGAFAVAFLFPFTQGGSDENMSIATQVLIFAATALGLNIVVGLAGLLDLGYIAFLGA 292 Query: 77 GAY------SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 GAY + + +++ V A S G+I+G P+L+ GDYLAI TL Sbjct: 293 GAYVGATLSTSAFATIGWKPPFIIVVLVGACFSALLGLIIGSPTLRVSGDYLAIVTLAFG 352 Query: 131 EIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 EIF+ + G + L + + Y++LL Sbjct: 353 EIFRFTMGNLDGNNGPDLTNGPNGIPAIPDLAIGSFDFGQPHTIAGITLGRFANYYFLLL 412 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + L + I W IR+++KA ++ + KL AFA + GMAG Sbjct: 413 VIAAFIILVFTRLNNSRIGRGWVAIREDEKAAEAMGVNVFGLKLFAFAGGAFLAGMAGTV 472 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A ++PD + F E+ +++ ++LGGM +++ + IL + E Y Sbjct: 473 KAHHDVSVTPDQYVFLESAFLLAAIVLGGMGTVAGVLVGATILKLLPEKLRDAADY---- 528 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L L++ R L+ + Sbjct: 529 -----------RLMIFGLVLVLMMRFRPEGLIASQRRKLEFHE 560 >gi|187922914|ref|YP_001894556.1| branched-chain amino acid ABC transporter ATPase/inner membrane protein [Burkholderia phytofirmans PsJN] gi|187714108|gb|ACD15332.1| ABC transporter related [Burkholderia phytofirmans PsJN] Length = 646 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 133/294 (45%), Gaps = 16/294 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 Y + I+IY + +GL IVVG G +SL + +GAY+ +L + G Sbjct: 19 FPVLSGNPYYIHLLETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGVGAYTAGVLFFKLG 78 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + P++ +I+ A G I+ LP+L+ G YLA+ TL I Q ++ + +TNG G Sbjct: 79 MPFIVTAPLAILITAAFGAILALPALRVSGPYLAMVTLAFGTILQILINEMDFLTNGPMG 138 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + E+ Y+++ + S ++ + R+ + A Sbjct: 139 VKIPKPSLAGRPM----------------NEVEYYWLVAALLVASLIVVHRVLRSHLGRA 182 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + +RD+ A + ++ K+ AF +S+ F G+AG ++ S ISP+ + F I+ Sbjct: 183 FEALRDSPIASDCMGVSVYRYKVYAFVISAGFAGLAGCLYSYSEQYISPNTYNFELTILF 242 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + +I+GG + + +AI++ + +L ++ + + + L Sbjct: 243 LLAIIMGGRKTRTGALLGSAIIVLLPKLLDDIDMFRTVASVLAAVVVIGAGVAL 296 >gi|53721017|ref|YP_110003.1| putative branched-chain amino acid ABC transporter [Burkholderia pseudomallei K96243] gi|167818025|ref|ZP_02449705.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 91] gi|167826388|ref|ZP_02457859.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 9] gi|226193322|ref|ZP_03788932.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei Pakistan 9] gi|254186503|ref|ZP_04893020.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei Pasteur 52237] gi|52211431|emb|CAH37422.1| putative branched-chain amino acid ABC transporter [Burkholderia pseudomallei K96243] gi|157934188|gb|EDO89858.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei Pasteur 52237] gi|225934922|gb|EEH30899.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei Pakistan 9] Length = 594 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|283782296|ref|YP_003373051.1| inner-membrane translocator [Pirellula staleyi DSM 6068] gi|283440749|gb|ADB19191.1| inner-membrane translocator [Pirellula staleyi DSM 6068] Length = 381 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 77/338 (22%), Positives = 141/338 (41%), Gaps = 18/338 (5%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 ++ + + + I+ + A GL++VVG GLL+L + IGAY Sbjct: 37 VIVALILYPFLPIPATYGTQLSNLFIFAILALGLNVVVGYTGLLNLGIAAFFGIGAYITG 96 Query: 83 I----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 I +G + + V+ + +GA G+++G P+L+ RGDYLA+ TL E+ + L Sbjct: 97 ILMASPTYPFGWNFVPTLVVATLGAGAAGLMLGAPTLRLRGDYLALVTLGFGEVLRTSLE 156 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + IT G + + YY+ L + + ++ Sbjct: 157 NLEEITGGTRTLGPIPPPA--------PETLIGLEFDWSQDFRPFYYLNLIVLAIVVKLL 208 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ + AW IR+++ A + + K+SAFA +A G+AG+ +A + S Sbjct: 209 FNLERSKLGRAWVAIREDELAATCMGISAARVKMSAFAAGAAIAGLAGSLYAINLGNTSA 268 Query: 259 D-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD---- 313 F F+ +I+++ VILGG+ S+ +LIG + + Sbjct: 269 PAAFDFNRSIMMLCCVILGGLGSIRGTLLGVLLLIGFDNVLSPILDGLIQQSGLNPDGSR 328 Query: 314 -CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 +F+ + +AL L++ +R L+ L Sbjct: 329 FLTFSSWRLLIFGLALILMMRLRPEGLIPASRVQLELH 366 >gi|91782127|ref|YP_557333.1| branched chain amino acid ABC transporter ATPase/inner membrane protein [Burkholderia xenovorans LB400] gi|91686081|gb|ABE29281.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 646 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 134/295 (45%), Gaps = 16/295 (5%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 Y + I+IY + +GL IVVG G +SL + +GAY+ +L + Sbjct: 18 VFPVLSGNPYYIHLLETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGVGAYTAGVLFFKL 77 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 G+ ++ P++ +++ G I+ LP+L+ G YLA+ TL I Q ++ + +TNG Sbjct: 78 GMPFFVTAPLAILVTAGFGAILALPALRVSGPYLAMVTLAFGTIIQILINEMDFLTNGPM 137 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ + + E+ Y+++ + S ++ + R+ + Sbjct: 138 GVKIPKPSFGGRPM----------------NEVEYYWLVAALLVASLIVVHRVLRSHLGR 181 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A+ +RD+ A + ++ K+ AF +S+ F G+AG ++ S ISP+ + F I+ Sbjct: 182 AFEALRDSPIASDCMGVSVYRYKVYAFVISAGFAGLAGCLYSYSEQYISPNTYNFELTIL 241 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + +I+GG + + +AI++ + +L ++ + + + L Sbjct: 242 FLLAIIMGGRKTRTGALLGSAIIVLLPKLLDDIDMFRTVASVLAAVVVIGAGVAL 296 >gi|167921081|ref|ZP_02508172.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei BCC215] Length = 594 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V +L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYAAAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|167582848|ref|ZP_02375722.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding protein [Burkholderia thailandensis TXDOH] Length = 594 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 116/327 (35%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I + + A GL ++ G G+ S Sbjct: 9 ALWLFLVVMFALPALPGAARVPEYWITLLNYIGLDAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ L + YG S WL + +++ + +G +++ G +L + T+ Sbjct: 69 GIGAYATAYLTTAYGASPWLGLIAGVVVTALVALALGAVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALTVFGQAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + +++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWMRVAIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVIGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|148258290|ref|YP_001242875.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp. BTAi1] gi|146410463|gb|ABQ38969.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 589 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 120/323 (37%), Gaps = 22/323 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V+ +L+ + + I + + A GL ++ G GL S GA Sbjct: 7 LIVFAVLVAAIPFIPGVPPFWIVLLDNIGLSALVAMGLVLLTGVGGLTSFGQAAFVGFGA 66 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L ++YG+S WL +P+S ++SG +++GL +++ G YL + TL + Sbjct: 67 YTTAVLSAQYGVSPWLTLPLSLLVSGLAAVLLGLVTVRLSGHYLPLGTLAWGLGLYYLFS 126 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K + GI L + +Y+ + ++A + Sbjct: 127 KLAFL-GRNDGISGIPPLSIGSLKMLD--------------PGTIYFAIWAAVLIAALLT 171 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L + A R +R A + AKL F ++ G++G +A ++P Sbjct: 172 MNLLDSRTGRAIRALRRGHIAAEAFGVYSPRAKLLVFIYAAVLAGLSGWLYAHFTRAVNP 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F I + + ++GG + AI++ + E+ + Sbjct: 232 TPFGAQAGIEYLFVAVVGGAGYVWGGVLGAAIVVILKEVLQSYLPLLLHGE-------GQ 284 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 T + I L ++ + L Sbjct: 285 LETIVFGILLVTLLQLAPTGLWP 307 >gi|33594439|ref|NP_882083.1| putative branched-chain amino acid transport system protein [Bordetella pertussis Tohama I] gi|33564514|emb|CAE43829.1| putative branched-chain amino acid transport system protein [Bordetella pertussis Tohama I] gi|332383850|gb|AEE68697.1| putative branched-chain amino acid transport system protein [Bordetella pertussis CS] Length = 598 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 125/325 (38%), Gaps = 22/325 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + + ++L + + ++ + I + M A GL ++ G GL S + Sbjct: 4 FLLIAFIVVLAGLPLLSATPEFWITQLNYIGLAAMVALGLVLLTGVGGLTSFGQAAFVGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L ++Y +S WL +PV +++ ++GL +L+ G YL + T+ + Sbjct: 64 GAYTTALLTTQYDISPWLALPVGLLVTAVVAFLLGLITLRLSGHYLPLGTIAWGLSLYYL 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + GI + + G ++ S +YY++ L+ Sbjct: 124 FGNLDWL-GKHDGIAGIEPISLFGWSLASGRH--------------IYYLIWVFVLLALW 168 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L + A R ++ S+ K+ F ++ ++G +A + + Sbjct: 169 ATRNLLDSRPGRAIRALKSGAGMAESMGVNTGIYKIVIFVWAALLACLSGWLYAHMQRAV 228 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F + I + + ++GG + +A+++G+ + + ++ F Sbjct: 229 SPSPFGLNYGIEYLFMAVVGGAGHVWGALLGSAVILGIKDQLQNILPKLIDTNANF---- 284 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+ S+ L Sbjct: 285 ---ELIFFGVLMILVLQYASNGLWP 306 >gi|83310903|ref|YP_421167.1| ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magneticum AMB-1] gi|82945744|dbj|BAE50608.1| ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magneticum AMB-1] Length = 415 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 174/346 (50%), Gaps = 23/346 (6%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ + + S + + +LIYVM WGL+IVVG GLL L V Sbjct: 81 RAMMVYVGWAMVAFALILPFLPFSGRNLVDKATLVLIYVMLGWGLNIVVGLAGLLDLGFV 140 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 YA+GAYSY +L +GLS W+ +P++ +++ A GM++G P L+ RGDY+AI T+ + E Sbjct: 141 AFYAVGAYSYALLSQTFGLSFWVCLPLAGLLAAAFGMVLGFPVLRLRGDYIAIVTMGLGE 200 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFM 183 I + +L W+ +T G GI +R G + ++ FF S IF+ Sbjct: 201 IVRVVLQNWQDVTGGPNGISGIERPSLFGLSFKMVPPEGSQTFAEFFGLDYSADHRVIFL 260 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y+++L + L+ I L +RR + AW +R+++ A SL KLSAFA + F G Sbjct: 261 YFLILALALLTNVITLRIRRLPVGRAWEALREDEIACRSLGINPTLVKLSAFATGAMFAG 320 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 AG+FFA + ISP+ F F E+ ++++IV+LGGM S I A +L+G+ E + Sbjct: 321 FAGSFFATRQGFISPESFTFIESAVILAIVVLGGMGSQIGIVLAALLLVGLPEWFREL-- 378 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 A+ L++L + LL R P+ L Sbjct: 379 -------------QQFRMLAFGGAMVLIMLWKPAGLLSTREPTIRL 411 >gi|91976368|ref|YP_569027.1| ABC transporter related [Rhodopseudomonas palustris BisB5] gi|91682824|gb|ABE39126.1| ABC transporter related [Rhodopseudomonas palustris BisB5] Length = 589 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 27/334 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + ++ I AV+ L + + + + I + + A GL ++ G GL S Sbjct: 1 MPRWLPIALFAAVMAALPMIPGIPP-----FWIVLLDNIGLAALVAMGLVLLTGVGGLTS 55 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 GAY+ L + YG+S WL +P+S +++GA +++GL +++ G YL + T+ Sbjct: 56 FGQAAFCGFGAYTTGYLTTVYGVSPWLTLPLSLLVAGAAAVLLGLMTVRLSGHYLPLGTI 115 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + K + GI L + +Y+V+ Sbjct: 116 AWGISLYYLFSKLDFL-GRNDGISRIPPLSIGTVQMFDPET--------------IYFVI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 M +SA + + L + A R +R A + AKL F ++ G++G Sbjct: 161 WAMVLISALLTMNLLDSRTGRAIRALRRGHIAAEAFGVQTARAKLLVFIYAAVLAGLSGW 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + ++P F I + I ++GG + AI+I + E+ G F Sbjct: 221 LYAHFQRSVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIVLKEVLQGYLPMVFG 280 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + I L +++ + + Sbjct: 281 GQ-------GQLEIIVFGILLVVLLQLAPGGVWP 307 >gi|53724001|ref|YP_104447.1| branched-chain amino acid ABC transporter permease/ATP-binding protein [Burkholderia mallei ATCC 23344] gi|67643077|ref|ZP_00441826.1| ABC transporter, hydrophobic amino acid uptake transporter [Burkholderia mallei GB8 horse 4] gi|121600309|ref|YP_994648.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia mallei SAVP1] gi|124386557|ref|YP_001027581.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia mallei NCTC 10229] gi|126450667|ref|YP_001082521.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia mallei NCTC 10247] gi|167001266|ref|ZP_02267065.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia mallei PRL-20] gi|254174917|ref|ZP_04881578.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia mallei ATCC 10399] gi|254201523|ref|ZP_04907887.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia mallei FMH] gi|254206861|ref|ZP_04913212.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia mallei JHU] gi|52427424|gb|AAU48017.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding protein [Burkholderia mallei ATCC 23344] gi|121229119|gb|ABM51637.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia mallei SAVP1] gi|124294577|gb|ABN03846.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia mallei NCTC 10229] gi|126243537|gb|ABO06630.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia mallei NCTC 10247] gi|147747417|gb|EDK54493.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia mallei FMH] gi|147752403|gb|EDK59469.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia mallei JHU] gi|160695962|gb|EDP85932.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia mallei ATCC 10399] gi|238524326|gb|EEP87759.1| ABC transporter, hydrophobic amino acid uptake transporter [Burkholderia mallei GB8 horse 4] gi|243062889|gb|EES45075.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia mallei PRL-20] Length = 594 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYAAAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|55981301|ref|YP_144598.1| branched-chain amino acid ABC transporter permease [Thermus thermophilus HB8] gi|55772714|dbj|BAD71155.1| branched-chain amino acid ABC transporter, permease protein [Thermus thermophilus HB8] Length = 443 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 17/351 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A+ +LL A + +I +GIQI I+ + GL++VVG GLL L +A+G Sbjct: 91 VALGLAILLLSVPIAGFANTFIFELGIQIGIFAAMSLGLNVVVGMAGLLDLGYAAFFAVG 150 Query: 78 AYSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 AY++ I GS G ++L + ++ + + G+++GLP+L+ RGDYLAI Sbjct: 151 AYTWAIFGSPQAGKFLQGNFPLPGEYMYLFMLIAVVTTAITGLLIGLPALRLRGDYLAIV 210 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFM 183 TL + E+ + + N G + + Y++F Sbjct: 211 TLGLGEVVRILANNLDHPINITNGPQGITPVGRPPIDWFRSLMGALGVRLDETTDYQLFF 270 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y ++L M L + L + AW IR+++ A ++ ++ KL AF +AF G Sbjct: 271 YLLVLAMIGLVVLANVNLANSRFGRAWVAIREDEIAAQAMGIPLLPTKLIAFMTGAAFSG 330 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 + G + A R +SP+ F +I ++++VILGGM S+ A L + Sbjct: 331 VMGVIYGAQRTFVSPESFTLLASITILAMVILGGMGSIPGAILGAAALTILNLDILKTFS 390 Query: 304 YYFNSLLKFDCS---FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L + S + + L L+++ R L+ LE Sbjct: 391 EFVRTSLPWIPSQVDPAKYERLVFGLILVLMMIYRPQGLIPEARHRAELEE 441 >gi|115522622|ref|YP_779533.1| ABC transporter related [Rhodopseudomonas palustris BisA53] gi|115516569|gb|ABJ04553.1| ABC transporter related [Rhodopseudomonas palustris BisA53] Length = 596 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 113/327 (34%), Gaps = 19/327 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ LL L + Y + ++LI F L +++G GL+S + Sbjct: 9 VVVFFVILLACLVALPFFTGPYPVKLITRMLILATFVLSLDLLIGVTGLVSFGHAAFFGC 68 Query: 77 GAYSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ + ++++ + + G +++G + RG Y + TL ++ Sbjct: 69 GAYAVYFVSPESEAANVFVALGAGLLAGGLVALVVGAFATLTRGFYFIMVTLAAGQMLFA 128 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + F YYV L + + Sbjct: 129 LFHDTDIAKGSDGAYINIKP----------ELTVFGMGLLDFSDRRQFYYVCLAILVGAY 178 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ L R+ + IR N+ SL KL+AF ++ G+AGA FA+ Sbjct: 179 FLLFALVRSPFGRVLQGIRANEVRMSSLGYNAYRYKLAAFTLAGMLAGLAGALFASIDGF 238 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++PD+ + ++ + I +V+LGG +L + E+ + Sbjct: 239 VTPDLLNWHQSGLAIMMVVLGGAGTLFGPILGALAYASLEEVL--------KTASIVGPF 290 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 L + +LM L L Sbjct: 291 VAEHWRLGTGATLIVAVLMSPEGLAGL 317 >gi|220904748|ref|YP_002480060.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869047|gb|ACL49382.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 407 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 92/323 (28%), Positives = 150/323 (46%), Gaps = 26/323 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L + + Y ++ I L+Y+M A GL+IVVG G L L V YA+GAY+Y Sbjct: 96 ILAVIMIAMPLVVSFYQTNIMISALLYIMLALGLNIVVGLAGQLVLGYVAFYAVGAYAYG 155 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L +G W+ +PV ++ G+ +G P L+ RGDYLAI TL EI + L W Sbjct: 156 LLHQFFGWGFWVCLPVGGFVAVIFGLALGFPVLRLRGDYLAIVTLGFGEIVRLALQNWTS 215 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ R F ++YY++L ++ +I L+ Sbjct: 216 LTGGPRGVGDIPRPGFF-----------GMDMDISTSTTYVYYLVLAAVAITIIVISRLK 264 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + A + +R+++ A ++ I KLSAFA+ S + G AG FAA I+P F Sbjct: 265 NSRVGLALQALREDEIACEAMGIDITRVKLSAFALGSCWAGFAGVIFAAKTTYINPSSFT 324 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ +++S+V+LGGM S++ + A ILI E + Y Sbjct: 325 FMESAMILSMVVLGGMGSITGVVIAALILILAPEYLRAFSEY---------------RML 369 Query: 323 LMVIALFLVILMRSHSLLRLRTP 345 + + ++++ R L+ Sbjct: 370 IFGAIMVIMMIFRPQGLISGERR 392 >gi|295696001|ref|YP_003589239.1| inner-membrane translocator [Bacillus tusciae DSM 2912] gi|295411603|gb|ADG06095.1| inner-membrane translocator [Bacillus tusciae DSM 2912] Length = 452 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 31/349 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 AVV +L L + + + Q+ IY+ A GL+IVVG GLL L V + Sbjct: 64 WIWAAVVLGAILPLAASTGPAYESYMEVATQMGIYIAMAVGLNIVVGFAGLLDLGFVAFF 123 Query: 75 AIGAYSYVILGSRYGLSI-------------WLLIPVSAMISGACGMIMGLPSLKFRGDY 121 ++GAY+Y I S WL +P+ I+G G+++GLP L+ +GDY Sbjct: 124 SLGAYTYAIFFSDQANQFLSGHHFPLPGGLFWLFLPLGMFIAGLFGVLLGLPVLRVKGDY 183 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI + I N G + + + Sbjct: 184 LAIVTLGFGEIIRIIFNNLDKPVNITNGAIGISSVRPPELFGVTFTFPHHY--------- 234 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 YY++L + + L + I AW+ +R+++ A ++ ++ KL+AFA ++F Sbjct: 235 --YYLVLVLLAGVFYAVHRLEHSRIGRAWKAVREDEIAAQAMGVPLVRTKLTAFAAGASF 292 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG-----VVE 296 G+ G FAA + I P F E+I ++ +VILGGM SL ++ + + Sbjct: 293 SGLMGVVFAAKQAFIDPTSFTMLESITILVMVILGGMGSLPGAVVGACLVTVLNLQLLPQ 352 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHT--TLMVIALFLVILMRSHSLLRLR 343 L +N ++ F + + L + L L + R +L R Sbjct: 353 LTNWLNQLAAQGMISFPPALSPSKMQRFLFGMLLILFTVFRPKGVLPAR 401 >gi|83721141|ref|YP_443814.1| branched-chain amino acid ABC transporter permease/ATP-binding protein [Burkholderia thailandensis E264] gi|167620988|ref|ZP_02389619.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding protein [Burkholderia thailandensis Bt4] gi|83654966|gb|ABC39029.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding protein [Burkholderia thailandensis E264] Length = 594 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 116/327 (35%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I + + A GL ++ G G+ S Sbjct: 9 ALWLFLVVMFALPALPGAARVPEYWITLLNYIGLDAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ L + YG S WL + +++ + +G +++ G +L + T+ Sbjct: 69 GIGAYATAYLTTAYGASPWLGLIAGVVVTALVALALGAVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALTVFGQAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + +++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWMRVAIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVIGGVAHVWGAVLGGAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|254184038|ref|ZP_04890629.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 1655] gi|184214570|gb|EDU11613.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 1655] Length = 594 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRAGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|170745295|ref|YP_001766752.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] gi|170658896|gb|ACB27950.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] Length = 611 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 69/306 (22%), Positives = 130/306 (42%), Gaps = 30/306 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y ++ +Q Y + GL++V+G G ++L + IGAY+ + GL+ W+ Sbjct: 47 SGYALNILMQAATYAIAVIGLTVVLGLCGQINLAQAAFFGIGAYAVGLGTVDGGLNFWIC 106 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + ++ G +G +L+ G YLA+ T+ +I +L W P+T+G G+ R Sbjct: 107 LITGLGLAVVLGAALGASTLRLGGHYLAMVTISFQQILTLVLTNWIPVTHGPDGVPNIRR 166 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + + ++ + RT + A R +RD Sbjct: 167 PALFADGQS------------------YLALCVLVLAVVGWLVWHMPRTRLGRAMRAVRD 208 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ A I K++AFA+ + G+ G FA S ISPD F F+E+I+ +++ +L Sbjct: 209 NELAAGVSGIDIYRTKVAAFALGALLAGLGGGLFAGSFTYISPDQFSFAESIVFLTMALL 268 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S TA+LI + E + + + +A+ L+++ Sbjct: 269 GGVGSPVGAVIGTALLILIPEWLRFLKE------------IPGLYLAIYGLAVILIVVFM 316 Query: 336 SHSLLR 341 + Sbjct: 317 PDGIWG 322 >gi|121595665|ref|YP_987561.1| inner-membrane translocator [Acidovorax sp. JS42] gi|120607745|gb|ABM43485.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax sp. JS42] Length = 358 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 88/339 (25%), Positives = 160/339 (47%), Gaps = 17/339 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL L L + L+YVM A GL+IVVG GLL L V YA+GA Sbjct: 9 ILGGIALLVLPLVLQYFGNAWVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGA 68 Query: 79 YSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 Y + +L S + +S+W++IP++ +++ G+++G+P LK RGDYL Sbjct: 69 YMFGLLASPHLADNFAWFAAQFPTGLHMSLWMVIPLALVLAACTGVLLGIPVLKLRGDYL 128 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + + N G ++ + L + + Sbjct: 129 AIVTLGFGEIIRIFMNNLDHPVNITNGPKGLGQIDSVKIFGLDLGKRLELFGYDINSVTL 188 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY+ L + ++ + L+ + I AW IR+++ A ++ KL AF + ++F Sbjct: 189 YYYLFLFLVLVTILVCYRLQDSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASFG 248 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AGA FAA + +SP+ F E+++++++V+LGG+ + + +L + E+ + Sbjct: 249 GVAGAMFAAFQGFVSPESFSLMESVMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYVA 308 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ ++ L+ +A+ +V+L+R L Sbjct: 309 GP-LQAMTDGRLDSSILRQLLIALAMIIVMLLRPRGLWP 346 >gi|333027880|ref|ZP_08455944.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces sp. Tu6071] gi|332747732|gb|EGJ78173.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces sp. Tu6071] Length = 597 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 76/350 (21%), Positives = 134/350 (38%), Gaps = 34/350 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +++ + + T+ +G ILI+ A GL++VVG GLL L V +G Sbjct: 238 VSLAAMFVAAICFPFTQDNDTYALIGTNILIFATVALGLNVVVGLAGLLDLGYVAFLGVG 297 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ L + A +S G+++G P+L+ RGDYLAI TL E Sbjct: 298 AYTAALVSGSPQSSIGVHFPFPLAVLTGAAVSLIFGVVIGAPTLRLRGDYLAIVTLGFGE 357 Query: 132 IFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 IF+ + + NG G+ L G P + + Sbjct: 358 IFRITMNNLNGNSGPDLVNGSQGVPNIPDLELFGFKFGEAHDVLGLPLGRSGN---YFLL 414 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + + ++ I AW IR+++ A ++ KL AFA+ + G+AG Sbjct: 415 MLLFTAIVLLVFHRSGQSRIGRAWVAIREDETAASAMGINGFRLKLLAFALGATLAGLAG 474 Query: 247 AFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 A ++P+ ++F+ + +I+ VILGGM +++ A+L + E M Sbjct: 475 TVQAHVNYSVTPEQYQFAGTAPPNSAFLIAAVILGGMGTITGPLIGAALLFLIPEKLEFM 534 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 Y + +R ++ R Sbjct: 535 QKYQLLLFGLALILL---------------MRLRPEGIVPDRRKQLEFHE 569 >gi|134281498|ref|ZP_01768206.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 305] gi|134247165|gb|EBA47251.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 305] Length = 594 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVLGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|167896464|ref|ZP_02483866.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei 7894] Length = 594 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYAAAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G + +YY++ + + Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|149204316|ref|ZP_01881283.1| inner-membrane translocator ABC transporter [Roseovarius sp. TM1035] gi|149142201|gb|EDM30248.1| inner-membrane translocator ABC transporter [Roseovarius sp. TM1035] Length = 846 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 73/324 (22%), Positives = 136/324 (41%), Gaps = 31/324 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L + A + Y+ + + V+ GL+I++G G +S V +AIG Sbjct: 24 ILGIVALTAITIMLALNANGYLVFILALFALNVVVGVGLNILLGLSGQISFGHVGFFAIG 83 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ I+ WL VS +IS GM++ +P+L+ G YLA+ T+ + I ++ Sbjct: 84 AYTTAIMVIAGFDY-WLAFIVSGIISSFAGMLLAMPALRVAGPYLAMMTIAFAFIVEHAA 142 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I+ + +T G G+ F + + +E + + + +S + Sbjct: 143 IELRDLTGGHNGLMGFRSPEF---------------AGRIFFETEVAIAAVLLAGVSLLL 187 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L R A R + + A S+ K +AF +S+ G+AGA F + IS Sbjct: 188 FLQLSRGRWGMAMRAVASSDVAAQSIGLNPFAIKTTAFVLSALLAGLAGALFTPLQLFIS 247 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F F ++I+ + VI+GG L + I++ + E+ G+ Y Sbjct: 248 PGSFPFFQSILFLLAVIVGGTGRLLGPVIGSLIVVLLPEVLSGLAEY------------- 294 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + + V+L+ ++ Sbjct: 295 --RLLIFGGIMMGVLLLAPKGIIG 316 >gi|293606937|ref|ZP_06689284.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292814669|gb|EFF73803.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 607 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 63/322 (19%), Positives = 133/322 (41%), Gaps = 25/322 (7%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ + + ++ + + ++ + +IV G G LSL + Y IG Y+ Sbjct: 28 LILLIVMFLVPVVMGTPFWTNLFVLLFVFASLSVAWNIVGGYAGQLSLGHAVFYGIGGYT 87 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L +G+S W+ + A+IS A +++ P+L+ RG + A+AT+ + E+ + ++I Sbjct: 88 ATLLTQNFGISPWIGMLAGAVISAAVAIVISYPTLRLRGPFFALATIAILEVVRLLVIHE 147 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + T G +GI + + + R I + G+ + Sbjct: 148 ESWTGGSSGISLPLNIGWAWIVFREK--------------INYVIIAFGLFLFVTWVSWA 193 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +R++ I + IR+ + A ++ + K+ A VS+ + G F + P Sbjct: 194 IRKSRIGHYLIAIREREDAALAVGIHTVRVKIIAAVVSAMLTSIIGTFHITYLTFVDPSS 253 Query: 261 -FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F +I V ++GG+ +++ T +++ + EL G N + Sbjct: 254 AFSLELSIQVAMFALIGGLGTVAGPIAGTFLVLPIAELARGWLSSVGNGM---------- 303 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 H + + L V+L L Sbjct: 304 HGLIYGLILVAVVLTIPRGLAG 325 >gi|320449592|ref|YP_004201688.1| branched-chain amino acid ABC transporter permease [Thermus scotoductus SA-01] gi|320149761|gb|ADW21139.1| branched-chain amino acid ABC transporter, permease protein [Thermus scotoductus SA-01] Length = 442 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 88/340 (25%), Positives = 155/340 (45%), Gaps = 17/340 (5%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR- 87 A + ++ +GIQI IY A GL++VVG GLL L +A+GAY++ I GS Sbjct: 102 VPLAGFANTFVFELGIQIGIYAAMALGLNVVVGMAGLLDLGYAAFFAVGAYTWAIFGSEQ 161 Query: 88 -----------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G ++L + ++ + + G+++GLP+L+ RGDYLAI TL + E+ + + Sbjct: 162 AKNFMQGNFPLPGEYMYLFMGIAIVTTALTGLVIGLPALRLRGDYLAIVTLGLGEVVRIL 221 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFMYYVLLGMCFLS 194 N G + + Y++F Y+++L M L Sbjct: 222 ANNLDHPINFTNGPQGITPVQRPPIDWFRQLMATLGVHLDRTTDYQLFFYFLVLLMIGLV 281 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + L + AW IR+++ A S+ ++ KL AF +AF G+ G FAA R Sbjct: 282 VLVNVNLANSRFGRAWVAIREDEVAARSMGIPLLPTKLLAFMTGAAFSGVMGVIFAAQRT 341 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV-VELCCGMNFYYFNSLLKFD 313 +SP+ F +I ++ +VILGGM S+ A L + +++ + + SL + Sbjct: 342 FVSPESFTLLASITILGMVILGGMGSIPGAILGAAALTILNLDVLKTFSEFVRTSLPQIP 401 Query: 314 CSFNMRHT--TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L L+++ R L+ + +E Sbjct: 402 NQVDPAKYERLVFGLILVLMMIFRPEGLIPEKRHKAEMEE 441 >gi|119386285|ref|YP_917340.1| ABC transporter related [Paracoccus denitrificans PD1222] gi|119376880|gb|ABL71644.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Paracoccus denitrificans PD1222] Length = 838 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 118/324 (36%), Gaps = 34/324 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ L L + ++++IY + A GL+++VG GL+S + + A Sbjct: 12 LLIVAAGLVLLPVLLGRIGLGANSAVEVVIYALAAMGLNVLVGYTGLVSFGHGVWFGTAA 71 Query: 79 YSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y + S S+ + + V + + ++G L+ RG Y ++ TL +S + + Sbjct: 72 YIVGLTARSMGNASMAVSLTVGVVATALIAALVGFLVLRRRGVYFSLMTLALSAMGFQLA 131 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W +T G+ G+ +R L + Y + + F ++ Sbjct: 132 FRWTDVTGGENGLGGIERPAMLDANLS------------------FYIFVALLGFAVIAL 173 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + ++ + IR+N +L + KL AF +S+A G+AG S Sbjct: 174 LQRVLQSPFGSVLEAIRENDGRAQALGYDVRRYKLKAFVLSAAITGLAGGLLLYKNRMTS 233 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + + ++++V++GGM A I E + + Sbjct: 234 AEPMSIIFSGELLAMVVIGGMRGYLGPALGALFYILFREYLSMYSENW------------ 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + ++ ++ Sbjct: 282 ---LLWFGLIFVGFVIFARQGMIG 302 >gi|318056307|ref|ZP_07975030.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces sp. SA3_actG] gi|318075970|ref|ZP_07983302.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces sp. SA3_actF] Length = 600 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 75/350 (21%), Positives = 133/350 (38%), Gaps = 34/350 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +++ + + T+ +G ILI+ A GL++VVG GLL L V +G Sbjct: 241 VSLAAMFVAAICFPFTQDNDTYALIGTNILIFATVALGLNVVVGLAGLLDLGYVAFLGVG 300 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ L + A +S G+++G P+L+ RGDYLAI TL E Sbjct: 301 AYTAALVSGSPQSSIGVHFPFPLAVLTGAAVSLVFGVVIGAPTLRLRGDYLAIVTLGFGE 360 Query: 132 IFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 IF+ + + NG G+ L G + + Sbjct: 361 IFRITMNNLNGNSGPDLVNGSQGVPNIPDLELFGFKFGEAHDVLGLSLGRSGN---YFLL 417 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + + ++ I AW IR+++ A ++ KL AFA+ + G+AG Sbjct: 418 MLLFTAIVLLVFHRSGQSRIGRAWVAIREDETAASAMGINGFRLKLLAFALGATLAGLAG 477 Query: 247 AFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 A ++P+ ++F+ + +I+ VILGGM +++ A+L + E M Sbjct: 478 TVQAHVNYSVTPEQYQFAGTAPPNSAFLIAAVILGGMGTITGPLIGAALLFLIPEKLEFM 537 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 Y + +R ++ R Sbjct: 538 QKYQLLLFGLALILL---------------MRLRPEGIVPDRRKQLEFHE 572 >gi|182439314|ref|YP_001827033.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467830|dbj|BAG22350.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 598 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 80/347 (23%), Positives = 134/347 (38%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L+ T+ + +G ILI+ A GL++VVG GLL L V +G Sbjct: 242 VTLTAALIAAFCFPFTQQNEQYALIGANILIFATVALGLNVVVGLAGLLDLGYVAFLGVG 301 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ W + A S G+++G P+L+ RGDYLAI TL E Sbjct: 302 AYAAALVSGSPLSPVGVQFPFWAAVLTGAAASLVFGVVIGAPTLRLRGDYLAIVTLGFGE 361 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ + ++ G + L + Y ++L Sbjct: 362 IFRLTVNALNGVSGPDLTNGSQGIPSIPDLNLFGFDFGVSHDIGGITLGRSANYYLLMLV 421 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + I AW IR+++ A ++ KL AFA+ + G+AG Sbjct: 422 FTAVVVLVFRRSGESRIGRAWVAIREDETAATAMGINAFRLKLLAFALGATLAGLAGTVQ 481 Query: 250 AASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A ++P+ ++F+ + +++ VILGGM +LS A+L + M Y Sbjct: 482 AHVSYTVTPEQYQFAGSVPPNSAFLLAAVILGGMGTLSGPLVGAALLYLIPAKLQFMQDY 541 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L IAL L++ R L+ R Sbjct: 542 ---------------QLFLFGIALILLMRFRPEGLVADRRKQLEFHE 573 >gi|46199270|ref|YP_004937.1| branched-chain amino acid transport system permease protein livM [Thermus thermophilus HB27] gi|46196895|gb|AAS81310.1| branched-chain amino acid transport system permease protein livM [Thermus thermophilus HB27] Length = 443 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 87/351 (24%), Positives = 153/351 (43%), Gaps = 17/351 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + +LL A + +I +GIQI I+ + GL++VVG GLL L +A+G Sbjct: 91 VVLGLAILLLSVPIAGFANTFIFELGIQIGIFAAMSLGLNVVVGMAGLLDLGYAAFFAVG 150 Query: 78 AYSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 AY++ I GS G ++L + ++ + + G+++GLP+L+ RGDYLAI Sbjct: 151 AYTWAIFGSPQAGKFLQGNFPLPGEYMYLFMLIAVVTTAITGLLIGLPALRLRGDYLAIV 210 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFM 183 TL + E+ + + N G + + Y++F Sbjct: 211 TLGLGEVVRILANNLDHPINITNGPQGITPVGRPPIDWFRSLMGALGVRLDETTDYQLFF 270 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y ++L M L + L + AW IR+++ A ++ ++ KL AF +AF G Sbjct: 271 YLLVLVMIGLVVLANVNLANSRFGRAWVAIREDEIAAQAMGIPLLPTKLIAFMTGAAFSG 330 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 + G + A R +SP+ F +I ++++VILGGM S+ A L + Sbjct: 331 VMGVIYGAQRTFVSPESFTLLASITILAMVILGGMGSIPGAILGAAALTILNLDILKTFS 390 Query: 304 YYFNSLLKFDCS---FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L + S + + L L+++ R L+ LE Sbjct: 391 EFVRTSLPWIPSQVDPAKYERLVFGLILILMMIYRPQGLIPEARHRAELEE 441 >gi|302877548|ref|YP_003846112.1| inner-membrane translocator [Gallionella capsiferriformans ES-2] gi|302580337|gb|ADL54348.1| inner-membrane translocator [Gallionella capsiferriformans ES-2] Length = 366 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 90/326 (27%), Positives = 150/326 (46%), Gaps = 14/326 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88 + ++Y+M A GL+IVVG GLL L + +A+GAY Y + GS + Sbjct: 35 WVRIVDFAMLYIMLALGLNIVVGYAGLLDLGYIAFFAVGAYCYALTGSPHLALAFPLLFP 94 Query: 89 ---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 LS W+++P++A+++G G+++G P+L+ RGDYLAI TL EI + + N Sbjct: 95 DGLHLSFWIVLPLAAVLAGGFGVLLGAPTLRLRGDYLAIVTLGFGEIIRIFMNNLNAPVN 154 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G R+ + SL + + +Y+ L L + L ++ Sbjct: 155 FTNGPQGISRIDPISVAGVSLNSTQQVMGITLPSVHLYFYLFLAFTMLVVFVSSRLEKSR 214 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 I AW IR+++ A ++ KL AFA+ + F G++G FA + +SP+ F E Sbjct: 215 IGRAWMAIREDEIAASAMGINTRNLKLLAFAMGAMFGGVSGTLFAGFQGFVSPESFSLME 274 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLM 324 +I+V+ +V+LGGM + + +L + E+ +L L Sbjct: 275 SIMVLCMVVLGGMGHIYGVILGGLLLALLPEVLRHSVVPLQQALFGKTLIDPESLRMLLF 334 Query: 325 VIALFLVILMRSHSLLRLRTPSNFLE 350 +AL +V+L R L R LE Sbjct: 335 GVALIVVMLYRPAGLWPSRVRRRELE 360 >gi|222111882|ref|YP_002554146.1| inner-membrane translocator [Acidovorax ebreus TPSY] gi|221731326|gb|ACM34146.1| inner-membrane translocator [Acidovorax ebreus TPSY] Length = 358 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 17/339 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL L L + L+YVM A GL+IVVG GLL L V YA+GA Sbjct: 9 ILGGIALLVLPLVLQYFGNAWVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGA 68 Query: 79 YSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 Y + +L S + +S+W++IP++ +++ G+++G+P LK RGDYL Sbjct: 69 YMFGLLASPHLADNFAWFAAQFPTGLHMSLWMVIPLALVLAACTGVLLGIPVLKLRGDYL 128 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + + N G ++ + L + + Sbjct: 129 AIVTLGFGEIIRIFMNNLDHPVNITNGPKGLGQIDSVKIFGLDLGKRLELFGYDINSVTL 188 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY+ L + ++ + L+ + I AW IR+++ A ++ KL AF + ++F Sbjct: 189 YYYLFLFLVLVTILVCYRLQDSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASFG 248 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AGA F A + +SP+ F E+++++++V+LGG+ + + +L + E+ + Sbjct: 249 GVAGAMFGAFQGFVSPESFSLMESVMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYVA 308 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ ++ L+ +A+ +V+L+R L Sbjct: 309 GP-LQAMTDGRLDSSILRQLLIALAMIIVMLLRPRGLWP 346 >gi|89900622|ref|YP_523093.1| ABC transporter-like protein [Rhodoferax ferrireducens T118] gi|89345359|gb|ABD69562.1| ABC transporter related [Rhodoferax ferrireducens T118] Length = 648 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 16/308 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L +V L Y + ILIY + +GL IVVG G +SL + + Sbjct: 8 FLLMVLGLAALGLYPVLVPNPYYIHLVETILIYAILLFGLDIVVGYTGQVSLGHAGLFGV 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G+Y+ L + G L +P + ++ G ++ LP+L+ G YLA+ TL I Q + Sbjct: 68 GSYTAGALFFKLGAPFLLAVPAAIGVTALFGAVLALPALRVTGPYLAMVTLAFGTIIQIL 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + +T G GI V ++F + E+ +YV+ + L+ Sbjct: 128 INEMTFLTEGPIGIKVHKPMFFGHK----------------LTEVEYFYVVAVLMVLALV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + ++ + A+ +RD+ A + ++ K+ AF +S+A G+AG+ +A S + I Sbjct: 172 VVHRILKSHLGRAFEALRDSPVACDCMGVSVYRYKVYAFVISAALAGLAGSLYAYSEEYI 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP+ + F I+ + VI+GG + S I++ + L + + + + Sbjct: 232 SPNTYNFELTIMFLLAVIMGGRKTRSGALIGAVIVVMLPSLLSDIELFRKIATVLAIAVS 291 Query: 317 NMRHTTLM 324 M + Sbjct: 292 GMAVYNFI 299 >gi|326779966|ref|ZP_08239231.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|326660299|gb|EGE45145.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 597 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 80/347 (23%), Positives = 134/347 (38%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L+ T+ + +G ILI+ A GL++VVG GLL L V +G Sbjct: 241 VTLTAALIAAFCFPFTQQNEQYALIGANILIFATVALGLNVVVGLAGLLDLGYVAFLGVG 300 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ W + A S G+++G P+L+ RGDYLAI TL E Sbjct: 301 AYAAALVSGSPLSPVGVQFPFWAAVLTGAAASLVFGVVIGAPTLRLRGDYLAIVTLGFGE 360 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ + ++ G + L + Y ++L Sbjct: 361 IFRLTVNALNGVSGPDLTNGSQGIPSIPDLNLFGFDFGVSHDIGGITLGRSANYYLLMLV 420 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + I AW IR+++ A ++ KL AFA+ + G+AG Sbjct: 421 FTAVVVLVFRRSGESRIGRAWVAIREDETAATAMGINAFRLKLLAFALGATLAGLAGTVQ 480 Query: 250 AASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A ++P+ ++F+ + +++ VILGGM +LS A+L + M Y Sbjct: 481 AHVSYTVTPEQYQFAGSVPPNSAFLLAAVILGGMGTLSGPLVGAALLYLIPAKLQFMQDY 540 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L IAL L++ R L+ R Sbjct: 541 ---------------QLFLFGIALILLMRFRPEGLVADRRKQLEFHE 572 >gi|152980782|ref|YP_001354237.1| ABC-type branched-chain amino acid transport system, permease component [Janthinobacterium sp. Marseille] gi|151280859|gb|ABR89269.1| ABC-type branched-chain amino acid transport system, permease component [Janthinobacterium sp. Marseille] Length = 404 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 171/379 (45%), Gaps = 40/379 (10%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + F + N LL ++ L+F F+ ++ + L+Y+M A GL++VVG Sbjct: 3 NYFDTKNNPRKAYSGLLLILAIALVFPFIAQNFGNSWV-RIMDFALLYIMLALGLNVVVG 61 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRY--------------------------------G 89 GLL L + YAIGAY +L S Sbjct: 62 FAGLLDLGYIAFYAIGAYLTALLASPQFAVVLESFVNQYPAIGETLLWVFGPEIAQNGIH 121 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW---KPITNG 146 LS+W ++P++A+++G G ++G P+LK RGDYLAI TL EI + + ITNG Sbjct: 122 LSLWAIVPLAALVAGFFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNGPVNITNG 181 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSF---VIYEIFMYYVLLGMCFLSASIILWLRR 203 GI + D + G ++ + Y++ L +C I + L+ Sbjct: 182 PQGINMIDPIRIFGVSLNGEAGSRATVMIGDYAMPSVNAYYFLFLFLCIAIIFISVRLQN 241 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 + + A+ IR+++ A ++ KL AFA+ ++F G+AGA FA+ + +SP+ F Sbjct: 242 SRLGRAFVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGIAGAMFASFQGFVSPESFSL 301 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTT 322 +E+I V+++V+LGGM + + IL + E+ + SL + Sbjct: 302 TESIAVLAMVVLGGMGHIPGVVLGGIILAALPEVLRHVVEPLQQSLFGEVLIDAEVLRQL 361 Query: 323 LMVIALFLVILMRSHSLLR 341 L +A+ L++L R L Sbjct: 362 LYGLAMVLIMLYRPSGLWP 380 >gi|282862073|ref|ZP_06271136.1| inner-membrane translocator [Streptomyces sp. ACTE] gi|282563098|gb|EFB68637.1| inner-membrane translocator [Streptomyces sp. ACTE] Length = 599 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 79/335 (23%), Positives = 131/335 (39%), Gaps = 28/335 (8%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 T+ + +G ILI+ A GL++VVG GLL L V +GAY+ ++ Sbjct: 256 FPFTQQNEQYALIGANILIFATVALGLNVVVGLAGLLDLGYVAFLGVGAYAAALVSGSPM 315 Query: 90 ------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 W + A S G+++G P+L+ RGDYLAI TL EIF+ + + Sbjct: 316 SPIGVQFPFWAAVLTGAAASLVFGVVIGAPTLRLRGDYLAIVTLGFGEIFRLTVNALNGV 375 Query: 144 TN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + L L + Y ++L + + Sbjct: 376 SGPDLTNGSQGIPSIPDLELFGFDLGTSHDVGGFTLGRSANYYLLMLVFTAVVVLVFRRS 435 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + I AW IR+++ A ++ KL AFA+ + G+AG A ++P+ + Sbjct: 436 GESRIGRAWVAIREDETAATAMGINAFRLKLLAFALGATLAGLAGTVQAHVSYTVTPEQY 495 Query: 262 KFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +F+ + +++ VILGGM +LS A+L + M Y Sbjct: 496 QFAGSVPPNSAFLLAAVILGGMGTLSGPLVGAALLYLIPAKLQFMQDY------------ 543 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L +AL L++ R L+ R Sbjct: 544 ---QLFLFGLALILLMRFRPEGLVADRRKKLEFHE 575 >gi|302518451|ref|ZP_07270793.1| branched-chain amino acid ABC transporter permease [Streptomyces sp. SPB78] gi|302427346|gb|EFK99161.1| branched-chain amino acid ABC transporter permease [Streptomyces sp. SPB78] Length = 600 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 75/351 (21%), Positives = 133/351 (37%), Gaps = 34/351 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +++ + + T+ +G ILI+ A GL++VVG GLL L V + Sbjct: 240 AVSLAAMFVAAICFPFTQDNDTYALIGTNILIFATVALGLNVVVGLAGLLDLGYVAFLGV 299 Query: 77 GAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 GAY+ ++ L + A +S G+++G P+L+ RGDYLAI TL Sbjct: 300 GAYTAALVSGSPQSSIGVHFPFPLAVLTGAAVSLIFGVVIGAPTLRLRGDYLAIVTLGFG 359 Query: 131 EIFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 EIF+ + + NG G+ L G + Sbjct: 360 EIFRITMNNLNGNSGPDLVNGSQGVPNIPDLELFGFKFGEAHDVLGLSLGRSGN---YFL 416 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++L + + ++ I AW IR+++ A ++ KL AFA+ + G+A Sbjct: 417 LMLLFTAIVLLVFHRSGQSRIGRAWVAIREDETAASAMGINGFRLKLLAFALGATLAGLA 476 Query: 246 GAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G A ++P+ ++F+ + +I+ VILGGM +++ A+L + E Sbjct: 477 GTVQAHVNYSVTPEQYQFAGTAPPNSAFLIAAVILGGMGTITGPLIGAALLFLIPEKLEF 536 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 M Y + +R ++ R Sbjct: 537 MQKYQLLLFGLALILL---------------MRLRPEGIVPDRRKQLEFHE 572 >gi|320353685|ref|YP_004195024.1| inner-membrane translocator [Desulfobulbus propionicus DSM 2032] gi|320122187|gb|ADW17733.1| inner-membrane translocator [Desulfobulbus propionicus DSM 2032] Length = 401 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 98/337 (29%), Positives = 157/337 (46%), Gaps = 26/337 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L ++ LF T Y ++ L+YV+ GL+IVVG GLL L V Y Sbjct: 91 AVTLPLLGIGALFFLAFPTLFSTYQVNIMSTALMYVVLGLGLNIVVGVAGLLDLGYVAFY 150 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAYSY +L +GL W ++P+ ++ G+++G P L+ RGDYLAI TL EI + Sbjct: 151 AVGAYSYALLHLHFGLGFWTVLPIGGLLGALFGILLGFPVLRLRGDYLAIVTLGFGEIIR 210 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +L W + G +GI R F S I++YY+++ M + Sbjct: 211 LVLENWTEFSQGPSGIANIPRPG-----------LFGIELSLEASIIYLYYLMILMVLFT 259 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +I L+ + I AW +R++ A ++ KL+AFA+ + + GMAG FFAA Sbjct: 260 IFMINRLQNSRIGRAWYALREDDIACQAMGIDKTRTKLTAFALGATWAGMAGVFFAAKTT 319 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F F E+ I++ IV+LGGM S+ + +LI + E + Y Sbjct: 320 FVNPASFTFLESAIILCIVVLGGMGSIVGVIVGALVLILLPEYLRAVADY---------- 369 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L ++++ R ++ S + R Sbjct: 370 -----RMLAFGAVLVVMMVFRPQGIVATVRRSYTVNR 401 >gi|241763745|ref|ZP_04761793.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241367050|gb|EER61435.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 358 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 84/319 (26%), Positives = 152/319 (47%), Gaps = 17/319 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88 + L+YVM A GL+IVVG GLL L V YA+GAY + ++ S + Sbjct: 29 WVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGAYLFGLMASPHLTDTFTSFAS 88 Query: 89 ------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 S+W++IP++A+++ G ++G P+LK RGDYLAI TL EI + L Sbjct: 89 MFPDGLHTSLWVVIPLAALVAAVFGAVLGAPTLKLRGDYLAIVTLGFGEIIRIFLNNLDH 148 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 N G ++ + L + + YY+ L + +S I L+ Sbjct: 149 PVNLTNGPKGIGQIDSVKIFGLDLGKRLELFGFDINSVTLYYYLFLLLVIVSIVICYRLQ 208 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + I AW IR+++ A ++ KL AF + ++F G++GA F A + +SP+ F Sbjct: 209 DSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASFGGVSGAMFGAFQGFVSPESFS 268 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 E+++++++V+LGG+ + + +L + E+ + ++ + Sbjct: 269 LMESVMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYVAGP-LQAMTDGRLDSAILRQL 327 Query: 323 LMVIALFLVILMRSHSLLR 341 L+ +A+ +++L+R L Sbjct: 328 LIALAMIIIMLLRPRGLWP 346 >gi|121595558|ref|YP_987454.1| leucine/isoleucine/valine transporter permease subunit [Acidovorax sp. JS42] gi|222111779|ref|YP_002554043.1| leucine/isoleucine/valine transporter permease subunit [Acidovorax ebreus TPSY] gi|120607638|gb|ABM43378.1| L-valine ABC transporter membrane protein / L-leucine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein [Acidovorax sp. JS42] gi|221731223|gb|ACM34043.1| inner-membrane translocator [Acidovorax ebreus TPSY] Length = 413 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 98/341 (28%), Positives = 160/341 (46%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +++ L+ + + + +IYVM GL+IVVG GLL L V YA+GA Sbjct: 87 VLIFVALMIAASWPFFAGRNAVDIATLAMIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGA 146 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L G S W +P++ + G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 147 YTYALLFHWAGWSFWEALPLAGAAAALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLV 206 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 T G GI + LG + + +FF + + I +Y + L Sbjct: 207 NLTDWTGGPDGISSIPKPSVLGLEMTRSPTVEGGTTFHQFFGMEFNSLHMVIALYLMALL 266 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ I L R I AW +R+++ A SL + KLSAF + + F G GAFF Sbjct: 267 LAVVTLFISNRLIRMPIGRAWEALREDEIACRSLGLNPMKIKLSAFTLGAMFAGFGGAFF 326 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A IL + EL + Y Sbjct: 327 AARQGIVNPESFTFIESALILAIVVLGGMGSQLGVIVAAIILTVLPELAREFSEY----- 381 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + L+++ R LL ++ + Sbjct: 382 ----------RMLIFGLVMILMMVWRPQGLLPMKRHHVEVP 412 >gi|212702035|ref|ZP_03310163.1| hypothetical protein DESPIG_00037 [Desulfovibrio piger ATCC 29098] gi|212674550|gb|EEB35033.1| hypothetical protein DESPIG_00037 [Desulfovibrio piger ATCC 29098] Length = 411 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 98/318 (30%), Positives = 152/318 (47%), Gaps = 26/318 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 LL + S Y ++ I ++YV+ A GL+I VG G L L V YA+GAYSY Sbjct: 99 LLLAVMIAMPLVSSFYQTNIMISAMLYVILALGLNIAVGIAGQLVLGYVAFYAVGAYSYA 158 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L +GL W +PV ++ G+ +G P L+ RGDYLAI TL EI + +L+ W Sbjct: 159 LLNQAFGLGFWACLPVGGFMAIVFGLALGFPVLRLRGDYLAIVTLGFGEIVRLVLLNWTS 218 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G GI F IF+YY++L L+ +I L+ Sbjct: 219 LTGGSGGIKNIPGPSFF-----------GQELEIAANTIFIYYLVLLAVILTIIVISRLK 267 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + A + +R+++ A ++ + KLSAFA+SS + G AG FAA I+P F Sbjct: 268 NSRVGLALQALREDEIACEAMGIDLARVKLSAFALSSCWAGFAGVIFAAKTTFINPASFT 327 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F E+ +++S+V+LGGM S+ + A ILI E + Y Sbjct: 328 FMESAMILSMVVLGGMGSIVGVVIAATILILAPEYLRAFSEY---------------RML 372 Query: 323 LMVIALFLVILMRSHSLL 340 L + ++++ R L+ Sbjct: 373 LFGAIMVIMMIFRPQGLV 390 >gi|301057691|ref|ZP_07198764.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] gi|300448152|gb|EFK11844.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] Length = 363 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 76/336 (22%), Positives = 145/336 (43%), Gaps = 17/336 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 N++ +V ++ L Y+ + + IY + A GL+I+ G G LS Sbjct: 28 FNRFRTARGRRFMVITVICLFGLLPLVLNDYMLHLFHAVCIYAIVAVGLTIMTGYTGQLS 87 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L + IGAY+ L + L +L+IP + ++ G + +PSL+ + +L +ATL Sbjct: 88 LAHGAFFGIGAYTAASLVTWASLPFFLVIPAAGTVATLFGALFAIPSLRLKPIFLPMATL 147 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 I + IL+ G G + + + ++ ++YV Sbjct: 148 AGQFIVEYILVHRLSFAGGSKGFVMPKPV---------------LVDLGLETKLSLFYVT 192 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + L R+ A+R +R N++A ++ KL AFAVSS G+AGA Sbjct: 193 AICLLIIIWLSDNLLRSKTGRAFRALRQNERAAAAMGIDAYRHKLFAFAVSSFLAGLAGA 252 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 FA + + I P F + +I ++I+I+GG+ S+S + ++ + E+ + N Sbjct: 253 LFAYAVETIVPTFFNLTLSIEFLAIMIIGGLGSISGAIIGSVAIVFLKEIIGVAGAFSMN 312 Query: 308 SLL--KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 S + + + ++ + + L I+ + L Sbjct: 313 SNIHAGAGPAIISLYEFVLGLVIVLFIIFKPEGLAS 348 >gi|328881684|emb|CCA54923.1| Branched-chain amino acid transport system permease protein LivM [Streptomyces venezuelae ATCC 10712] Length = 612 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 142/350 (40%), Gaps = 34/350 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L++ T++ ++G+ ILI+ A GL+IVVG GLL L V +G Sbjct: 268 LSIAGAFTAAALFPFTQTDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 327 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ L W I V A S G+++G P+L+ RGDYLAI TL E Sbjct: 328 AYAAALVSGAPSSPFGVHLPFWAAILVGAGASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 387 Query: 132 IFQNILIK-----WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 IF+ ++ +TNG GI L G + F F+ + Sbjct: 388 IFRIAVMNTDGTSGPDVTNGSNGIASIPNLSIFGFDFGAEHTIAGFTIGRFANYFFLMLL 447 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 ++ + + + I AW IR+++ A ++ KL AFA+ ++ G+AG Sbjct: 448 IMAVV---VLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFALGASLAGLAG 504 Query: 247 AFFAASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 A ++P+ + F+ I +++ V+LGGM ++S ++L + M Sbjct: 505 TVQAHVTYTVTPEQYLFAGPIPPNSAFLLAAVVLGGMGTMSGPLVGASLLFLIPNKLQFM 564 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 Y +AL L++ R ++ R Sbjct: 565 GEY---------------QLLAFGVALILLMRFRPEGMIANRRNQLEFHE 599 >gi|39933743|ref|NP_946019.1| ABC transporter ATP-binding protein [Rhodopseudomonas palustris CGA009] gi|39647590|emb|CAE26110.1| putative ABC transporter subunit, membrane spanning domain + ATP-binding component [Rhodopseudomonas palustris CGA009] Length = 595 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 112/329 (34%), Gaps = 19/329 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L ++ LL L + Y + +I+I F L +++G GL+S + Sbjct: 7 LVVVLFFTLLLGCLLALPFVAGPYPVKLMTRIVIIATFVLSLDLLIGVTGLVSFGHAAFF 66 Query: 75 AIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 GAY+ + ++ + + + G +++G + RG Y + TL ++ Sbjct: 67 GCGAYAVYFVSPEAEAANVIVALGAGLLAGGLAALVVGAFATLTRGFYFIMVTLAAGQML 126 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + YYV + + Sbjct: 127 FALFHDTDIAKGSDGAYINVKP----------ELTLAGLTLLDFSDRRQFYYVCVVVLIA 176 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++L L R+ + IR N+ SL KL+AF ++ G+AGA FA+ Sbjct: 177 AYGLLLALVRSPFGRVLQGIRANEVRMSSLGYDTYRYKLAAFTIAGMVAGLAGALFASID 236 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ++PD+ + ++ + I +V+LGG +L + EL + Sbjct: 237 GFVTPDLLNWHQSGLAIMMVVLGGAGTLFGPILGALAYSSLEELL--------KTASIVG 288 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L +LM L L Sbjct: 289 SFVADHWRLGTGATLIAAVLMSPDGLAGL 317 >gi|157147157|ref|YP_001454476.1| hypothetical protein CKO_02934 [Citrobacter koseri ATCC BAA-895] gi|157084362|gb|ABV14040.1| hypothetical protein CKO_02934 [Citrobacter koseri ATCC BAA-895] Length = 368 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 17/342 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 LL+ + + Y + L+Y+M A GL+IVVG GLL + + YA+GA Sbjct: 21 LFCIALLIAPVVASQLGGNYWVRVIDFALLYIMLALGLNIVVGYTGLLDMGFIAFYAVGA 80 Query: 79 YSYVILGSRYGLSIWLLIPVSA----------------MISGACGMIMGLPSLKFRGDYL 122 Y +L S + ++ ++ V +++ CG+++G P+LK RGDYL Sbjct: 81 YLAALLASPHLSEVFPILAVWFPDGLHTSYLLIVPAAALVAAVCGILLGAPTLKLRGDYL 140 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + ++ N G + L + + V Sbjct: 141 AIVTLGFGEIIRILMRNLDRPVNITNGAKGITGVDTLNLFGLKFSGVYHWLGFKVPALWL 200 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY+L+ + + L L+ + I AW IR+++ ++ + KL AFA+ ++F Sbjct: 201 WYYLLMLVIVAIIFVCLRLQHSRIGRAWHAIREDEDVARAMGINVRNYKLLAFAMGASFG 260 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AGA F A + +SP+ F E+I V+++V+LGGM + + +L + EL Sbjct: 261 GVAGALFGAFQGFVSPESFTLQESIAVLAMVVLGGMGHIPGVILGAVLLTALPELLRSQA 320 Query: 303 FYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 L + +AL LV+L+R + +R Sbjct: 321 APVQQMLFGTVLIDPEILRQLFYGLALVLVMLVRPSGIWPVR 362 >gi|2190588|gb|AAC13364.1| putative ABC transporter subunit [Rhodopseudomonas palustris] Length = 595 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 112/329 (34%), Gaps = 19/329 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L ++ LL L + Y + +I+I F L +++G GL+S + Sbjct: 7 LVVVLFFTLLLGCLLALPFVAGPYPVKLMTRIVIIATFVLSLDLLIGVTGLVSFGHAAFF 66 Query: 75 AIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 GAY+ + ++ + + + G +++G + RG Y + TL ++ Sbjct: 67 GCGAYAVYFVSPEAEAANVIVALGAGLLAGGLAALVVGAFATLTRGFYFIMVTLAAGQML 126 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + YYV + + Sbjct: 127 FALFHDTDIAKGSDGAYINVKP----------ELTLAGLTLLDFSDRRQFYYVCVVVLIA 176 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++L L R+ + IR N+ SL KL+AF ++ G+AGA FA+ Sbjct: 177 AYGLLLALVRSPFGRVLQGIRANEVRMSSLGYDTYRYKLAAFTIAGMVAGLAGALFASID 236 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ++PD+ ++ + + I +V+LGG +L + EL + Sbjct: 237 GFVTPDLLNWNPSGLAIMMVVLGGAGTLFGPILGALAYSSLEELL--------KTASIVG 288 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L +LM L L Sbjct: 289 SFVADHWRLGTGATLIAAVLMSPDGLAGL 317 >gi|303327496|ref|ZP_07357937.1| high-affinity branched-chain amino acid transport protein [Desulfovibrio sp. 3_1_syn3] gi|302862436|gb|EFL85369.1| high-affinity branched-chain amino acid transport protein [Desulfovibrio sp. 3_1_syn3] Length = 406 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 98/325 (30%), Positives = 155/325 (47%), Gaps = 26/325 (8%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L LF+ + S Y ++ I L+YVM A GL+IVVG G L L V YA+GAY+ Sbjct: 92 LVVLALFMLVMPLVSSFYQTNIMISALLYVMLALGLNIVVGLAGQLVLGYVAFYAVGAYA 151 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L +G W +PV +++ G+ +G P L+ RGDYLAI TL EI + L W Sbjct: 152 YGLLYQFFGWGFWACLPVGGVMAVLFGLALGFPVLRLRGDYLAIVTLGFGEIVRLGLQNW 211 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G GI R F ++YY++L ++ +I Sbjct: 212 TSLTGGPRGISEIPRPGFF-----------GMEMDINTSTTYVYYLVLAAVVITIIVISR 260 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L+ + + A + +R+++ A ++ I KLSAFA+ S + G AG FAA I+P Sbjct: 261 LKNSRVGLALQALREDEIAGEAMGIDITRVKLSAFALGSCWAGFAGVIFAAKTTYINPSS 320 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F E+ +++S+V+LGGM S++ +A A ILI E + Y Sbjct: 321 FTFMESAMILSMVVLGGMGSIAGVAIAAMILILAPEYLRAFSEY---------------R 365 Query: 321 TTLMVIALFLVILMRSHSLLRLRTP 345 + + ++++ R L+ Sbjct: 366 MLIFGAIMVIMMIFRPQGLISGERR 390 >gi|261339882|ref|ZP_05967740.1| high-affinity branched-chain amino acid transport protein [Enterobacter cancerogenus ATCC 35316] gi|288317792|gb|EFC56730.1| high-affinity branched-chain amino acid transport protein [Enterobacter cancerogenus ATCC 35316] Length = 350 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 95/342 (27%), Positives = 155/342 (45%), Gaps = 17/342 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 LLL + Y + L+Y+M A GL+IVVG GLL + + YA+GA Sbjct: 3 LFCLALLLAPVVATQLGGNYWVRVIDFALLYIMLALGLNIVVGYTGLLDMGFIAFYAVGA 62 Query: 79 YSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 Y +L S + S L+IPV+A+++ CG+++G P+LK RGDYL Sbjct: 63 YLAALLASPHLLEVFPILAVWFPDGLHTSYLLIIPVAALVAAVCGIVLGAPTLKLRGDYL 122 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + ++ N G + L + + V Sbjct: 123 AIVTLGFGEIIRILMRNLDRPVNITNGAKGITGVDTLNLFGLKFSGVYHWFGVKVPALWL 182 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY+L+ + + L L+ + I AW IR+++ ++ + KL AFA+ ++F Sbjct: 183 WYYLLMLVIVGIIFVCLRLQHSRIGRAWHAIREDEDVARAMGINVRNYKLLAFAMGASFG 242 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AGA F A + +SP+ F E+I V+++V+LGGM + + +L + EL Sbjct: 243 GVAGALFGAFQGFVSPESFTLQESIAVLAMVVLGGMGHIPGVILGAVLLTALPELLRSQA 302 Query: 303 FYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 +L + +AL LV+L+R + +R Sbjct: 303 APVQQALFGTVLIDPEVLRQLFYGLALVLVMLVRPSGIWPVR 344 >gi|167770134|ref|ZP_02442187.1| hypothetical protein ANACOL_01477 [Anaerotruncus colihominis DSM 17241] gi|167667456|gb|EDS11586.1| hypothetical protein ANACOL_01477 [Anaerotruncus colihominis DSM 17241] Length = 355 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 28/308 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y+ + I I IY M A GL+++ G G +SL +AIGAY ++ G S + Sbjct: 50 SQYLIRIFIMIGIYSMLALGLNLLTGYTGQVSLGHAGFFAIGAYVSSLMSINLGCSFIIS 109 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 A+I+ CG ++GLP+++ G YL I TL EI + +L+ W +TNG G+ + Sbjct: 110 FIAGALITALCGFLLGLPTMRLSGSYLTIVTLGFGEIVKMVLLNWTDVTNGPMGLKNIPK 169 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 G + + ++ + + V+L R+ A+ I+D Sbjct: 170 PNLFGMDLTLANSGLYYLMLLLVLLVSVVCVVLI-------------RSKTGRAFIAIKD 216 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + K+ +FA S+ G+AGAF+A I P+ F F + ++ISIVIL Sbjct: 217 DELAATMMGIRTSRFKILSFAFSAGIAGLAGAFYAPVISFIDPNTFVFDVSTLIISIVIL 276 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM ++ + AILI E+ + + + L +++ R Sbjct: 277 GGMGTMRGMYLGAAILIAFPEVARFLMD---------------WRFVVYGLVLVVMMRFR 321 Query: 336 SHSLLRLR 343 LL + Sbjct: 322 PQGLLGWK 329 >gi|90422534|ref|YP_530904.1| ABC transporter related [Rhodopseudomonas palustris BisB18] gi|90104548|gb|ABD86585.1| ABC transporter related [Rhodopseudomonas palustris BisB18] Length = 594 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 113/326 (34%), Gaps = 17/326 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ LL L + Y + +I+I F L +++G GL+S + Sbjct: 9 VIVFFALLLTCLVALPFFTGPYPVKLMTRIVILATFVLSLDLLIGVTGLVSFGHAAFFGC 68 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ + + L+ + +++G + + I + + Sbjct: 69 GAYAVYFVSPESEAANVLVALGAGLLAGGLVAFIVGAFATLTRGFYFIMVTLAAGQMLFA 128 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L I NG G V+ + F YY+ L + + Sbjct: 129 LFHDTDIANGSDG---------AYINVKPDLTILGFGLLDFSDRRQFYYICLAVLVGAYC 179 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ L R+ + IR N+ SL KL+AF ++ G+AGA FA+ + Sbjct: 180 LLFALVRSPFGRVLQGIRANEVRMSSLGYNAYRYKLAAFTLAGMLAGLAGALFASIDGFV 239 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +PD+ + ++ + I +V+LGG +L + EL + Sbjct: 240 TPDLLNWHQSGLAIMMVVLGGAGTLFGPILGALAYASLEELL--------KTASIVGPFV 291 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 +L + +LM L L Sbjct: 292 ADHWRLGTGASLIVAVLMSPDGLAGL 317 >gi|262041877|ref|ZP_06015061.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040782|gb|EEW41869.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 428 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 161/339 (47%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L+ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 101 IIPLLVGLAIVFPFLATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P+ A+++ G ++G P L+ GDYLAI TL EI + +L Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ V F R + FF + + IF+Y VL + Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRAKDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + L R I AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL G + Y Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + ++++ R L+R L + Sbjct: 393 -------RVLLFGVLMVMMMIWRQRGLVRTSRSGVALRK 424 >gi|212711024|ref|ZP_03319152.1| hypothetical protein PROVALCAL_02093 [Providencia alcalifaciens DSM 30120] gi|212686192|gb|EEB45720.1| hypothetical protein PROVALCAL_02093 [Providencia alcalifaciens DSM 30120] Length = 422 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 103/328 (31%), Positives = 158/328 (48%), Gaps = 23/328 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + LIYVM GL++VVG GLL L YAIGAY++ +L Y Sbjct: 103 WPFMVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGAYTFGLLNHYYDF 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ + + G+++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWESLPIAGLTAALAGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTDITGGPNGI 222 Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + F G + FF + IF+Y+V L + L+ +I L Sbjct: 223 SQLPKPTFFGLEFSRTAKDGWDTFHHFFGLDYNPGDRIIFLYFVALLLVVLTLIVISRLL 282 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R + AW +R+++ A SL + KL+AF +S+ F G AGA FAA + ISP+ F Sbjct: 283 RMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISATFAGFAGALFAARQGFISPESFT 342 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F+E+ V++IV+LGGM S + A IL+ E+ +N Y Sbjct: 343 FAESAFVLAIVVLGGMGSQMSVILAAIILVVSREMMRDLNEY---------------SML 387 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ L+ Sbjct: 388 LLGALMVLMMIWRPQGLLPMQRRQMKLK 415 >gi|192289163|ref|YP_001989768.1| ABC transporter [Rhodopseudomonas palustris TIE-1] gi|192282912|gb|ACE99292.1| ABC transporter related [Rhodopseudomonas palustris TIE-1] Length = 597 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 112/329 (34%), Gaps = 19/329 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L ++ LL L + Y + +I+I F L +++G GL+S + Sbjct: 9 LVVVLFFTLLLGCLLALPFVAGPYPVKLMTRIVIIATFVLSLDLLIGVTGLVSFGHAAFF 68 Query: 75 AIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 GAY+ + ++ + + + G +++G + RG Y + TL ++ Sbjct: 69 GCGAYAVYFVSPEAEAANVIVALGAGLLAGGLAALVVGAFATLTRGFYFIMVTLAAGQML 128 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + YYV + + Sbjct: 129 FALFHDTDIAKGSDGAYINVKP----------ELTLAGLTLLDFSDRRQFYYVCVVVLIA 178 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++L L R+ + IR N+ SL KL+AF ++ G+AGA FA+ Sbjct: 179 AYGLLLALVRSPFGRVLQGIRANEVRMSSLGYDTYRYKLAAFTIAGMVAGLAGALFASID 238 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ++PD+ + ++ + I +V+LGG +L + EL + Sbjct: 239 GFVTPDLLNWHQSGLAIMMVVLGGAGTLFGPILGALAYSSLEELL--------KTASIVG 290 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L +LM L L Sbjct: 291 SFVADHWRLGTGATLIAAVLMSPDGLAGL 319 >gi|319763836|ref|YP_004127773.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330823900|ref|YP_004387203.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317118397|gb|ADV00886.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329309272|gb|AEB83687.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 419 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 97/341 (28%), Positives = 158/341 (46%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL + + + + +IYVM GL++VVG GLL L V YA+GA Sbjct: 94 VWITAALLLAVIWPFFAGRNAVDIATLAMIYVMLGLGLNVVVGFAGLLDLGFVGFYAVGA 153 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L G S W +P++ S G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 154 YTYALLFHWAGWSFWEALPLAGAASALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLV 213 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 T G GI + G + + +FF + + IF+Y + L Sbjct: 214 NLTDFTGGPDGISGLPKPSMFGLEMTRSPSAEGATTFHQFFGLEFNSMHMVIFLYLMALL 273 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ I L R I AW +R+++ A SL + KLSAF + + F G GAFF Sbjct: 274 LAVVTLFISNRLIRMPIGRAWEALREDEIACRSLGLNPMKIKLSAFTLGAMFAGFGGAFF 333 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 AA + ++P+ F F E+ ++++IV+LGGM S + A +L + E Y Sbjct: 334 AARQGIVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEFAREFAEY----- 388 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + L+++ R LL ++ ++ Sbjct: 389 ----------RMLIFGLVMILMMVWRPQGLLPMQRHHVEVK 419 >gi|322833434|ref|YP_004213461.1| inner-membrane translocator [Rahnella sp. Y9602] gi|321168635|gb|ADW74334.1| inner-membrane translocator [Rahnella sp. Y9602] Length = 429 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 160/339 (47%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ L++ + KYI ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 102 VIPLLIVLAIFFPFVATKYILTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 161 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+++ G ++G P L+ GDYLAI TL EI + +L Sbjct: 162 GLALGYQYLGLGFWSMLPLAAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLTN 221 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ +F R FF + + IF+Y VL+ + Sbjct: 222 WLSFTGGPNGVSAPPPTFFGLEFGRRAKEGGVPFHEFFHLTYNPNMKFIFIYAVLVLVVL 281 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R I AW +R+++ A ++ + KLSAF + ++ G+AG FFA Sbjct: 282 LVLFIKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFTLGASTAGIAGVFFATY 341 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Y Sbjct: 342 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVLAAFVLTVAPELLRSFAEY-------- 393 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + ++++ R L+R+ + + Sbjct: 394 -------RVLLFGVLMVVMMIWRPRGLIRISRSGFAVRK 425 >gi|296268395|ref|YP_003651027.1| inner-membrane translocator [Thermobispora bispora DSM 43833] gi|296091182|gb|ADG87134.1| inner-membrane translocator [Thermobispora bispora DSM 43833] Length = 327 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 83/315 (26%), Positives = 140/315 (44%), Gaps = 36/315 (11%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + Y S+ I+VM A GL+IVVG GLL L +A+GAY+ +L +R+ L Sbjct: 45 PFVIATPYALSVMTSAAIFVMLAAGLNIVVGYCGLLDLGYAAFFAVGAYTSGVLSTRFDL 104 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +P +++ G+++G P+L+ R DYLAI TL EI + + IT G +GI Sbjct: 105 PLLATLPAVIVVTIIAGIVIGAPTLRLRSDYLAIVTLGFGEIIRITANNLE-ITGGPSGI 163 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 Y L + YY+ + + ++ + L R+ + AW Sbjct: 164 YGIPGLTD--------------------NAVVFYYLTVVVVAVAVAGAARLGRSRLGRAW 203 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R IR+++ A ++ KL+A+ + + G+AG FAA ISP F F ++ +V+ Sbjct: 204 RFIREDEDAAEAMGVHTYRVKLAAYIAGAIWGGLAGVLFAAHLSAISPGSFTFLQSALVL 263 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 V+LGGM S + ++ + E+ Y + L + Sbjct: 264 MAVVLGGMGSTPGVVLGAIVISLLPEVLRDFADY---------------RYFAFGVLLII 308 Query: 331 VILMRSHSLLRLRTP 345 +L+R L R+ Sbjct: 309 FMLVRPQGLWPHRSR 323 >gi|271967281|ref|YP_003341477.1| branched-chain amino acid transporter permease [Streptosporangium roseum DSM 43021] gi|270510456|gb|ACZ88734.1| branched-chain amino acid transport system permease protein [Streptosporangium roseum DSM 43021] Length = 321 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 88/325 (27%), Positives = 148/325 (45%), Gaps = 36/325 (11%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + LL+ L + Y S+ I+VM A GL+IVVG GLL L V +A+GA Sbjct: 28 AGIAGLLIALLAPFVNASGYALSVMTSAAIFVMLAAGLNIVVGYCGLLDLGYVAFFAVGA 87 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L +R+ L + + +P +++ G+++G P+L+ R DYLAI TL EI + Sbjct: 88 YTSGVLSTRFDLPLLVTVPAVIVVTVIAGIVIGAPTLRLRSDYLAIVTLGFGEIIRITAN 147 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G +GIY L + YYV + + L+ Sbjct: 148 NL-DVTGGPSGIYGIPHLTD--------------------SPVVFYYVTVVVVSLAVLGA 186 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ + AWR +R+++ A ++ KL+A+ + + G+AG FAA ISP Sbjct: 187 ARLGRSRLGRAWRFVREDEDAAEAMGVHTYRVKLAAYIAGAVWGGLAGVLFAAQLSAISP 246 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F F ++ +V+ V+LGGM S+ + ++ + E+ + Y Sbjct: 247 TSFTFLQSALVLMAVVLGGMGSIPGVVIGAVVISILPEILRDLADY-------------- 292 Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343 + + L V+++R L R Sbjct: 293 -RFFIFGVLLIAVMILRPQGLWPAR 316 >gi|146312139|ref|YP_001177213.1| inner-membrane translocator [Enterobacter sp. 638] gi|145319015|gb|ABP61162.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Enterobacter sp. 638] Length = 429 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 101/339 (29%), Positives = 160/339 (47%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ +L + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 102 IIPLVLTLAVCFPFIATKYVLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 161 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+++ A G ++G P L+ GDYLAI TL EI + IL Sbjct: 162 GLALGYQYLGLGFWTMLPLAALMAAAAGALLGFPVLRMHGDYLAIVTLGFGEIIRLILNN 221 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ +F R FF + + IF+Y VLL + Sbjct: 222 WLTFTGGPNGVSAPPPTFFGLEFGRRAKEGGVPFHEFFHLTYNPNLKFIFIYVVLLLVVL 281 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA Sbjct: 282 LVLYVKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGIAGVFFATY 341 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Y Sbjct: 342 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVLAAFVLTVTPELLRSFAEY-------- 393 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + ++++ R L+R+ + + Sbjct: 394 -------RVLLFGMLMVVMMIWRPRGLIRINRSGFAVRK 425 >gi|237653138|ref|YP_002889452.1| branched-chain amino acid ABC transporter permease [Thauera sp. MZ1T] gi|237624385|gb|ACR01075.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 373 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 93/331 (28%), Positives = 160/331 (48%), Gaps = 5/331 (1%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ + + A + + + L+Y+M A GL++VVG GLL L + YA+GAY Sbjct: 22 LIILVAIAAPFIAWQFGRSWVRILDFALLYMMLALGLNLVVGFAGLLDLGYIAFYAVGAY 81 Query: 80 SYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 ++ L S + L W+++P+ A + G+++G P L+ RGDYLAI TL EI + Sbjct: 82 TFAFLASPHFDVHLPFWVILPLGAAFAALAGVMLGFPVLRLRGDYLAIVTLGFGEIVRIF 141 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY-VLLGMCFLSA 195 ++ N G + + + L R R F I+ +F+YY L S Sbjct: 142 MLNLNYPVNITNGPQGINMIDPINLFGWDLSRNIRIGEDFTIHSLFLYYYFFLAAVVASI 201 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I L+ + I AW +RD++ A ++ KL AFA+ + F G+AGA F A + Sbjct: 202 IFIQRLQISRIGRAWAAMRDDELAAKAIGINTRDMKLLAFALGATFGGVAGALFGAFQGF 261 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDC 314 +SP+ F E+I V+++V+ GGM +L+ +L + EL + +L Sbjct: 262 VSPESFSLMESIAVLTMVVFGGMGNLAGAVVGAFVLALLPELLRDVAVPLQQTLFGHVLL 321 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + L+ +A+ L++L+R ++ R Sbjct: 322 DPEVLRMLLLSLAMILMMLLRPAGMIPARAR 352 >gi|315186616|gb|EFU20375.1| inner-membrane translocator [Spirochaeta thermophila DSM 6578] Length = 331 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 144/338 (42%), Gaps = 31/338 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + +L L++ + + + + Y + I V+ A GL+++ G G L++ Sbjct: 6 RDGLVLAGLSIGVVAAVTALVRSGFTTLYTAQVITLSGINVIVALGLNLITGFTGQLAIG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 A+GAY+ + G L + +++ GM++G P+ + RGDYLAI TL Sbjct: 66 HAGFMAVGAYTSALTMMLLGFPPVLGVISGGLLAAVVGMLIGFPTFRLRGDYLAIVTLAF 125 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 E+ + I+I +T G AG+ F ++ +I V+L Sbjct: 126 GEVIRVIIINLPSLTGGAAGLKGVPP----------------FAEGRMLKQIVAMDVVLV 169 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 FL +++ + R++ A IRD++ A ++ + K+ +F +S+ G+ G + Sbjct: 170 FMFLVIALMYTVVRSSYGRALIAIRDDEIAAHTMGIDVFGYKMFSFTLSAFIAGLGGGLY 229 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A ++P F F +++ ++ IV+ GGM S++ A +L + E + Y Sbjct: 230 APFFGYLTPQTFTFLKSVEILIIVVFGGMGSITGTVVAGFLLTSLQEFLRFLKDY----- 284 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R L R S Sbjct: 285 ----------RMVIYPLILIVMMLFRPQGLFGEREISI 312 >gi|312114588|ref|YP_004012184.1| ABC transporter [Rhodomicrobium vannielii ATCC 17100] gi|311219717|gb|ADP71085.1| ABC transporter related protein [Rhodomicrobium vannielii ATCC 17100] Length = 597 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 108/311 (34%), Gaps = 19/311 (6%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-YGL 90 Y +++I +F L +G GL+S + +GAY+ + S Sbjct: 24 PFFVGPYGIKFATRLIILSIFVVSLDFALGLAGLISFGHAAFFGVGAYAVYFVSSDEGAA 83 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 ++++ + + C +++G + RG Y + TL ++ ++ Sbjct: 84 NVFVALGAGVGVGAVCALVIGAFACLTRGFYFIMVTLAAGQMMFSLFHDTDIAKGADGAY 143 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + +YV L + + + L RT Sbjct: 144 INIKP----------DLTILGHTLIDFDDRRVFFYVCLALLVFTVVALYMLARTPFGRVV 193 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 + ++ N+ +L KL+AF VS AF G+AGA FA ++PD+F + ++ + I Sbjct: 194 QGLKSNETRLSALGFDAYRFKLAAFVVSGAFAGLAGALFACIDGFVTPDLFSWHQSGLAI 253 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +V+LGG +L + + E + + L + Sbjct: 254 MMVVLGGAGTLFGPILGALFYVSLEETLKTASL--------VGDFVSSHWLLGTGAVLVI 305 Query: 331 VILMRSHSLLR 341 +L+ L Sbjct: 306 AVLLSPDGLAG 316 >gi|296532436|ref|ZP_06895161.1| ABC superfamily ATP binding cassette transporter ATP-binding/permease [Roseomonas cervicalis ATCC 49957] gi|296267232|gb|EFH13132.1| ABC superfamily ATP binding cassette transporter ATP-binding/permease [Roseomonas cervicalis ATCC 49957] Length = 835 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 105/300 (35%), Gaps = 34/300 (11%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-SIWLLIPVSAM 101 ++I+ + A GL+I+VG GL+S + IGAY+ I+ + + L + + Sbjct: 32 ATDVVIFAIAAMGLNILVGHTGLVSFGHGAWFGIGAYAAGIIQRHFFPGDMLLPMLFGMV 91 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 I+GL L+ RG Y ++ TL M+ + I +W +T G+ G R Sbjct: 92 FVLGFAAIVGLLILRRRGVYFSLLTLAMTAMLFTIAFRWTELTGGEDGFGGITR------ 145 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 +F+ Y + + F + + IR+N++ Sbjct: 146 ------------YAFLDSSSAYYTAVAVIGFGMVYALWRFHHAPVGTVLVAIRENEQRAR 193 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 + KL AF +S+ +AG A + S + + + ++++V++GGM Sbjct: 194 FVGYDTTRYKLLAFTLSAGVTALAGMLSAYNHRFASAEPIAIAFSGELLAMVVIGGMRGF 253 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 A I E + I+ L+ Sbjct: 254 LGPALGALFYILFREFLSIY---------------TANWLLFFGLLFVGFIVFSPDGLVG 298 >gi|256394819|ref|YP_003116383.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928] gi|256361045|gb|ACU74542.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928] Length = 477 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 85/353 (24%), Positives = 149/353 (42%), Gaps = 24/353 (6%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + K LLAVV ++ +G + + Q+ +YV+ A GL++VVG GLL L Sbjct: 113 WVKRGTLLAVVVIAIMLPTMGLFTLPYFQSVLSDQVGVYVLAAVGLNVVVGWAGLLDLGY 172 Query: 71 VIAYAIGAYSYVILGSRY--------------GLSIWLLIPVSAMISGACGMIMGLPSLK 116 + +AIGAY+ IL R L+++ P++ +++ A G+I+G P+L+ Sbjct: 173 IAFFAIGAYTTAILSGRLPIGADGNPEAHPPIHLNLFFAFPIAVLLTMAAGLILGAPTLR 232 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 RGDYLAI TL EI NI G A + + Sbjct: 233 LRGDYLAIVTLGFHEIVLNIARNNPKNITGGALGATSIPTFRFNLFGIHYDWN------- 285 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 +Y+ +G+ + L + + W IR+++ A + + KL AFA Sbjct: 286 TSDSKPYWYLAIGLIIVVVFAFRRLEHSKVGRTWTAIREDEVAAAASGVPTVKYKLMAFA 345 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 + ++ G AG A I+PD F +I +++ VI GGM SL+ + +++ + Sbjct: 346 IGASTSGFAGVLATAKITAITPDNFPLPLSIYILAYVIFGGMGSLTGVIVGASLMTFLPY 405 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 G ++ D + L ++++ R L+ + + L Sbjct: 406 FLQGPPSWFNGGHPVVDPKDIPMW---VGAVLLVMMIFRPQGLIPSKRRAQEL 455 >gi|302533852|ref|ZP_07286194.1| branched chain amino acid transport permease [Streptomyces sp. C] gi|302442747|gb|EFL14563.1| branched chain amino acid transport permease [Streptomyces sp. C] Length = 607 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 80/347 (23%), Positives = 149/347 (42%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A+V + + T++ ++G+ ILI+ A GL+IVVG GLL L V +G Sbjct: 263 VALVGAFVAAMAFPLTQTDDQYATVGVNILIFATVALGLNIVVGLTGLLDLGYVAFLGVG 322 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ L W I + A+ S G+++G P+L+ RGDYLAI TL E Sbjct: 323 AYTAALVSGAPNSPFGVHLPFWAAILIGAIASMVFGVLIGAPTLRLRGDYLAIVTLGFGE 382 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ + + ++ G + + + + +LL Sbjct: 383 IFRITMNNFDGVSGPNVTNGSKGISNIPNVNLFGFDFGASHTIAGFTIGRFANYFLLLLL 442 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + I AW IR+++ A ++ KL AFA+ + G+AGA Sbjct: 443 VTLIVVMVFRRSAESRIGRAWVAIREDETAAEAMGINGFRVKLIAFALGATLAGLAGAVQ 502 Query: 250 AASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A + ++PD ++F+ ++ +++ V+LGGM ++S ++L + + Y Sbjct: 503 AHVQYTVTPDQYQFANSLPPNSAFLLAAVVLGGMGTISGPLVGGSLLFLIPNKLQFLGDY 562 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + IAL +++ +R L+ R L + Sbjct: 563 ---------------QLLVFGIALVILMRLRPEGLIPNRRNQLELHK 594 >gi|298241436|ref|ZP_06965243.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963] gi|297554490|gb|EFH88354.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963] Length = 661 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 102/362 (28%), Positives = 160/362 (44%), Gaps = 36/362 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y ++ A+ YP+L L G + + YV+ A GL+IVVG GLL L Sbjct: 283 YMVLIVAFALFYPVLDPLLFGYGTDGR--LAAYGDAGYYVILALGLNIVVGFAGLLDLGY 340 Query: 71 VIAYAIGAYSYVILG--------------SRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 V +AIG+Y + G + + W ++ V+A+I+ G+I+G P+L+ Sbjct: 341 VAFFAIGSYVWGFFGSSQFQIVTGITIAPTTWAWLFWPMVIVAALIAALWGVILGAPTLR 400 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 RGDYLAI TL EI I + TNG GI F G + S Sbjct: 401 LRGDYLAIVTLGFGEIVPVIFKELDKYTNGINGIVGVYSPAFPGVSWTS----------- 449 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 I YY++L + L L LR + + AW IR+++ A S ++ KL AF Sbjct: 450 -ITAGPYYYLILALIALCVFANLRLRDSRLGRAWIAIREDEIAASSSGINLVNTKLLAFG 508 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA------- 289 + F G+AGA+ AA +SPD F FS++II +++V++GG+ S+ + Sbjct: 509 AGAFFSGIAGAYHAAKLGTVSPDNFNFSDSIIYLAMVVIGGLGSIPGVVVGAIAVYAINL 568 Query: 290 -ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 IL + L N + +F+ + + L L+++ R L+ Sbjct: 569 QILGQLDTLAADPNNILHVFKTLPNFAFSNIRGLIFGVILVLIVIYRPEGLIPSARRRRE 628 Query: 349 LE 350 L Sbjct: 629 LH 630 >gi|157371438|ref|YP_001479427.1| inner-membrane translocator [Serratia proteamaculans 568] gi|157323202|gb|ABV42299.1| inner-membrane translocator [Serratia proteamaculans 568] Length = 428 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 101/339 (29%), Positives = 158/339 (46%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ + + L + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 101 IIPLMAVIALLFPFVATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P+ A+++ G ++G P L+ GDYLAI TL EI + +L Sbjct: 161 GLALGYQYLGLGFWAMLPLGALMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W +T G G+ V F R + F + + IF+Y VL + Sbjct: 221 WMSLTGGPNGVSVPAPTIFGLEFGRRAKDGGVPIHEFLGIAYNPNLKFIFIYAVLFLVVL 280 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R I AW +R+++ A SL + KLSAF + ++ G+AG FFA Sbjct: 281 LVLYIKHRLTRMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMMGASTAGLAGVFFATY 340 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Y Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVLAAFVLTVAPELLRSFAEY-------- 392 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + +++ R L+R+ S + Sbjct: 393 -------RVLLFGVLMVAMMIWRPRGLVRISRSSFAPRK 424 >gi|261420462|ref|YP_003254144.1| inner-membrane translocator [Geobacillus sp. Y412MC61] gi|319768132|ref|YP_004133633.1| inner-membrane translocator [Geobacillus sp. Y412MC52] gi|261376919|gb|ACX79662.1| inner-membrane translocator [Geobacillus sp. Y412MC61] gi|317112998|gb|ADU95490.1| inner-membrane translocator [Geobacillus sp. Y412MC52] Length = 354 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 66/323 (20%), Positives = 128/323 (39%), Gaps = 20/323 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + + Y+ S I I +Y + + G+++++G G +SL Y IGA Sbjct: 16 LLAGAAVWLGLPWLVFGNNYVLSTLILIGLYALVSTGMTLLMGYAGQISLGQAAFYGIGA 75 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ L + G WL + A+++ +++G+P + R YLA+ATL I Sbjct: 76 YASAYLTANAGWPSWLALAAGAVLAALVALVVGIPVFRLREHYLALATLGFGVIMFTFFK 135 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +WK IT G G + + R + ++ YY++ Sbjct: 136 EWKEITGGLNGFFGIPPI--------------RIAGVPLQSDLQFYYLVSLFVLAGLWFA 181 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + R+ + A R I ++ A SL I KL F +S+ + +AG+ +A I+P Sbjct: 182 RNIVRSRVGRALRAIHGSEVAASSLGVNISKYKLQIFMLSAVYASIAGSLYAHYVTFINP 241 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 D+F +I + +V++GG + A+ + + E + + Sbjct: 242 DLFGIVPSISFLIMVVIGGSAHVWGGLVGAAVYVCLGEWLKAVVPLLLPNAGG------E 295 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + L ++++ + L Sbjct: 296 FEIVFFGLLLVVMLIYMPNGLTG 318 >gi|92118125|ref|YP_577854.1| inner-membrane translocator [Nitrobacter hamburgensis X14] gi|91801019|gb|ABE63394.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Nitrobacter hamburgensis X14] Length = 461 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 40/359 (11%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LLA + L +Q+Y+ +GI +L YVM WGL++VVG GLL L V YA+ Sbjct: 103 LLAPALLIFALLVPVIFYNQRYLLDLGILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAV 162 Query: 77 GAYSYVILGSRY---------------------GLSIWLLIPVSAMISGACGMIMGLPSL 115 GAYSY +L + W+L+P+S +++ G+++G P L Sbjct: 163 GAYSYALLAQSGLPFPYFTDTYPYIAMDFLQLGPWAFWVLLPISGLLAALWGVLLGFPVL 222 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFR 171 + RGDYLAI TL EI + +++ W+ +T G G+ R G + Sbjct: 223 RLRGDYLAIVTLAFGEIIRMVILNWQDLTGGPNGVSGIPRPTVFGIPLTPGENGFAALIG 282 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 P S +F++Y++L + L+ + + LRR I W +R+++ A +L I K Sbjct: 283 VPFSPTHRLVFLFYLILTLALLTNWVTIRLRRLPIGRVWEAMREDEVACRALGINITTTK 342 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 LSAFA+ + F G AGAFFA + ISP+ F F E+ +V++IV+LGGM S +A A + Sbjct: 343 LSAFAIGAMFGGFAGAFFATRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAVAM 402 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 IG EL G++ + + + L+++ R L+ RTP+ FL+ Sbjct: 403 IGGFELFRGLDQF---------------RMLVFGGVMVLLMVWRPRGLVSHRTPTVFLQ 446 >gi|75676395|ref|YP_318816.1| ABC-type branched-chain amino acid transport system permease component [Nitrobacter winogradskyi Nb-255] gi|74421265|gb|ABA05464.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Nitrobacter winogradskyi Nb-255] Length = 456 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 114/360 (31%), Positives = 177/360 (49%), Gaps = 40/360 (11%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL + L +Q+Y+ + I +L YVM WGL++VVG GLL L V YA+ Sbjct: 98 LLIPALLIFALLVPVIFYNQRYLLDLAILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAV 157 Query: 77 GAYSYVILGSRY---------------------GLSIWLLIPVSAMISGACGMIMGLPSL 115 GAYSY +L + W L+PVS +++ G+++G P L Sbjct: 158 GAYSYALLAQSGLPFPYFIETYPYVAIDFLQLGSWAFWALLPVSGLLAAFWGVLLGFPVL 217 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFR 171 + RGDYLAI TL EI + +++ W+ +T G GI R G + Sbjct: 218 RLRGDYLAIVTLAFGEIIRLVILNWQDLTGGPNGISGIPRPTVFGIPLTRGDDGFAALIG 277 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 P S +F++Y++L + L+ + + LRR I AW +R+++ A +L I K Sbjct: 278 VPFSPTHRLVFLFYIILALALLTNWVTIRLRRLPIGRAWEAMREDEVACRALGINITTTK 337 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 LSAFA+ + F G AGAFFA + ISP+ F F E+ +V++IV+LGGM S +A A + Sbjct: 338 LSAFAIGAMFGGFAGAFFATRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAIAM 397 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 IG EL G++ + + + L+++ R L+ R P+ FL++ Sbjct: 398 IGGFELFRGLDQF---------------RMLVFGGVMVLLMIWRPRGLVSHRAPTVFLQK 442 >gi|308513235|ref|YP_003933638.1| branched-chain amino acid ABC transporter permease [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|307346941|gb|ADN43925.1| branched-chain amino acid ABC transporter, permease protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 339 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 84/315 (26%), Positives = 147/315 (46%), Gaps = 28/315 (8%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 + Y+ ++ +++LIY M A GL+I+VG GL+SL AIGAY IL Y Sbjct: 28 AFPFYVNNSYVMNLAVKMLIYTMMALGLNILVGYTGLVSLGQAGFVAIGAYVTTILTKTY 87 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + + + +S +++ G+++GLPSL+ G YL+I TL EI + I+I W+P+TNG Sbjct: 88 SFNFFPALLLSLLVAAVFGLVVGLPSLRLTGTYLSIITLGFGEIIRTIIIVWQPVTNGPL 147 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 GI LG IY +Y + L L L + + Sbjct: 148 GIRNIPIPKILGLKFS-------------IYNGGLYILTLICLLLVTLFCHRLVNSKMGR 194 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A+R ++ ++ A + + + K+ AF +++ +AG+ ++ I + F F + + Sbjct: 195 AFRAVKGDETAGVMMGIEVTYYKVIAFILAAVICALAGSLYSIQLGYIDQNTFTFDVSTL 254 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 ++SIVILGGM ++ + + ILI + E+ + Y L + L Sbjct: 255 ILSIVILGGMGTIRGMYVGSFILILLPEISRSLLDY---------------RFVLYGLIL 299 Query: 329 FLVILMRSHSLLRLR 343 +++ R +L R Sbjct: 300 VIMMRFRPQGILGWR 314 >gi|295402504|ref|ZP_06812455.1| inner-membrane translocator [Geobacillus thermoglucosidasius C56-YS93] gi|312109602|ref|YP_003987918.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1] gi|294975451|gb|EFG51078.1| inner-membrane translocator [Geobacillus thermoglucosidasius C56-YS93] gi|311214703|gb|ADP73307.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1] Length = 354 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 134/307 (43%), Gaps = 20/307 (6%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + Y+ S I I Y + + GL++++G G +SL Y IG+Y+ + +GLS Sbjct: 30 FSTNNYLLSTMIMIGFYTIVSTGLTLLMGYAGQISLGQAAFYGIGSYTSAYFTTHFGLSP 89 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 WL + A+++ ++G+P+ + R YLA+ATL I +WK IT G G + Sbjct: 90 WLAMIAGAVLAAMVAFVIGIPAFRLREHYLALATLGFGVIVFTFFKEWKEITGGLNGFFG 149 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 + G T+++ +F YY++ + R+ + A + Sbjct: 150 IPPIRLFGITIQTDFQF--------------YYLVWVFALAGILFARNIVRSRVGRALLS 195 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 I ++ A SL I KL F +S+ + +AG+ +A I+P +F+ +I + + Sbjct: 196 IHGSEVAANSLGVNITKYKLQMFMISAVYAAIAGSLYAHYVTFINPQLFEMITSIYFLIM 255 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V++GG S+ + + + EL + + + + I L +++ Sbjct: 256 VVIGGNGSIWGGLIGATVYVCLGELLKEIVPLFIPN------ASGEFEIVFFGILLVMML 309 Query: 333 LMRSHSL 339 + + L Sbjct: 310 IYMPNGL 316 >gi|226358033|ref|YP_002787772.1| branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] gi|226319676|gb|ACO47670.1| putative branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] Length = 598 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 112/316 (35%), Gaps = 22/316 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + ++ ILI + GL ++ G +GL S +GAY+ I+ +R G S WL Sbjct: 30 PTFQVTLLTNILISAIVVTGLVLLTGVVGLTSFGHAAFMGVGAYTTAIVSTRLGWSPWLG 89 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + +G+ +GL +L+ +G YL +AT+ + + G G+ Sbjct: 90 LLAGFVTTGSIAAFLGLITLRMQGHYLPLATIAWGISLFYVFGNTPAL-GGNTGLTDIPP 148 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L G + S F + LL + A R +R Sbjct: 149 LQLFGLNLTSPRSFAYLALLGLGLTALAAQFLL--------------SSRTGRAMRALRS 194 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + ++ F +S+ +AG +A ++ ++P F S I + + ++ Sbjct: 195 GPLVAEAFGVNTFSLRVQVFVLSALMASLAGWLYAHNQRFLNPTPFSLSAGIEYLFMAVV 254 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG + +A++ + E + F T + + + LV+ Sbjct: 255 GGSQYVWGGVMGSALITQLREQLRDVLPGLLGQQGSF-------ETVVFGLLIILVLQFA 307 Query: 336 SHSLLRLRTPSNFLER 351 L L ER Sbjct: 308 RRGLWPLVERILPQER 323 >gi|332286060|ref|YP_004417971.1| putative branched-chain amino acid transport system protein [Pusillimonas sp. T7-7] gi|330430013|gb|AEC21347.1| putative branched-chain amino acid transport system protein [Pusillimonas sp. T7-7] Length = 593 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 63/322 (19%), Positives = 135/322 (41%), Gaps = 25/322 (7%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V + + L + + ++ + + ++ + +IV G G LSL + Y IG Y+ Sbjct: 14 VILMAIMLLIPVVMGTSFWTNLFVLLFVFSALSVAWNIVGGYAGQLSLGHAVFYGIGGYT 73 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L +G++ WL + A+ISG +I+ P+L+ +G + A+AT+ + E+ + ++I Sbjct: 74 ATLLTQNFGITPWLGMFAGALISGLVAVIISYPTLRLKGPFFALATIAILEVVRLLVIHE 133 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + T G +GI + + + R I Y+ + + + Sbjct: 134 ERWTGGSSGISLPLNIGWTWMVFREK--------------INYVYIAFFIFVMVVWASWF 179 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +R++ + + IR+ ++A ++ K+ A +S+ + G F + P Sbjct: 180 VRKSRMGHYLIAIREREEAAKAVGIATANMKIWAAVISAMLTSIIGTFHITYLTFVDPAS 239 Query: 261 -FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F +I + ++GG+ ++S +++ + EL G N + Sbjct: 240 AFSLELSIQIAMFALIGGLGTISGPIAGAFLVLPIAELARGWLSSVGNGM---------- 289 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 H + I L +V+L H L Sbjct: 290 HGLVYGIILVVVVLTIPHGLAG 311 >gi|86750792|ref|YP_487288.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86573820|gb|ABD08377.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 443 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 173/338 (51%), Gaps = 19/338 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +A V + L Q+YI +GI +L YVM WGL+IVVG GLL L V YA+ Sbjct: 106 AVAPVLLIFTILVPVIFYDQRYILDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 165 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAYSY +L + + LS W+ +P++ +++ G+++G P L+ RGDYLAI TL EI + + Sbjct: 166 GAYSYALLATNFDLSFWICLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLV 225 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +I W+ +T G GI R G + L P S +F++Y++L + Sbjct: 226 IINWQSLTGGPNGISGIPRPTLFGIPLVPGENGLAAMLGIPFSPSHRLVFLFYLILALAL 285 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 ++ + LRR I AW +R+++ A +L KL+AFA + F G AGAFFA Sbjct: 286 ITNWATIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFATGAMFGGFAGAFFATR 345 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ISP+ F F E+ +V++IV+LGGM S +L + + Sbjct: 346 QGFISPESFTFQESALVLAIVVLGGMGS---------------QLGVALAALALIGGFEL 390 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + +++ L+++ R L+ R P+ +L+ Sbjct: 391 FRGLDQFRMLVFGLSMVLLMVWRPRGLIGHRAPTVYLQ 428 >gi|87120384|ref|ZP_01076279.1| inner-membrane translocator [Marinomonas sp. MED121] gi|86164487|gb|EAQ65757.1| inner-membrane translocator [Marinomonas sp. MED121] Length = 423 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 21/331 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ ++ ++L + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAI Sbjct: 94 MVWIIPVVILIGLMVPFIASKYVLTVIILGLIYVLLGLGLNIVVGLAGLLDLGFVGFYAI 153 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY + GL W ++P++A+++ G I+G P L+ GDYLAI TL EI + I Sbjct: 154 GAYGLALGYEYLGLGFWSMLPIAAILAAIAGAILGFPVLRMHGDYLAIVTLGFGEIIRLI 213 Query: 137 LIKWKPITNGKAGIYVADRLYFL------GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 L W +T+G G+ F FF + +F+Y +L + Sbjct: 214 LNNWSAVTHGPNGVSAPLPQLFGLEFKRRSRDGTPFHEFFNLDYNSGFKYMFVYLILFIV 273 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L + L + I AW +R+++ A SL + KLSAF + ++ G+AG FFA Sbjct: 274 VLLVLHVKQRLVKMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMMGASVAGIAGVFFA 333 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + ++P F F E+ ++++IV+LGGM S + A L EL Y Sbjct: 334 TYQGFVNPSSFTFMESALILAIVVLGGMGSTLGVVIAAFFLTVAPELLREFAEY------ 387 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + I + ++++ + L+R Sbjct: 388 ---------RVLMFGILMVVMMIWKPRGLVR 409 >gi|326405586|ref|YP_004285668.1| branched-chain amino acid ABC transporter permease/ATP-binding protein [Acidiphilium multivorum AIU301] gi|325052448|dbj|BAJ82786.1| branched-chain amino acid ABC transporter permease/ATP-binding protein [Acidiphilium multivorum AIU301] Length = 660 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 82/340 (24%), Positives = 130/340 (38%), Gaps = 51/340 (15%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---------------- 83 + Y A GL+IVVG GLL L +AIGAY+Y I Sbjct: 36 IDVAANSCAYAALALGLNIVVGFTGLLDLGYAAFFAIGAYAYGILNSFQLHPHWSAAWAP 95 Query: 84 ---------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + WL++P SA+I+ GM G P+L+ +GDYLAI TL Sbjct: 96 LAAIGFVAKLGAGAAATVHFTFPFWLMLPASAVIAACFGMAFGAPTLRLKGDYLAIVTLG 155 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 EI + W +TNG G+ G + + ++ + Sbjct: 156 FGEIVPIVARNWSSLTNGAEGLNGVGPPVLFGYRFGINATPYYYVGLGLVLLLLF----- 210 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 I L L+ + I AW +R+++ A ++ KL AFA+ + F GM G F Sbjct: 211 --------ISLRLKPSRIGRAWMAVREDEIAASAMGVHTTRLKLLAFAMGAGFAGMTGTF 262 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + A +PDMF +I+V+ +++LGG+ S+ +L + + Sbjct: 263 YIAKLQTATPDMFDLPVSIMVLVMIVLGGLASVWGAILGAVLLELLQAWFLPALSGWVQG 322 Query: 309 L-------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + I L ++L R L+ Sbjct: 323 LGNAIHSPFLQNLELTSASELIFGIILVTMMLYRRDGLVP 362 >gi|146634|gb|AAA83885.1| livM [Escherichia coli str. K-12 substr. W3110] Length = 424 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 92/329 (27%), Positives = 141/329 (42%), Gaps = 25/329 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIG + Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGLHFCAAQSLLRLG 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + L + G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 LLDLPADC-WINGSGGGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 221 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + FF IF+Y V L + LS +I L Sbjct: 222 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 281 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW + +++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 282 LRMPLGRAWEALGEDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 341 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+E+ V++IV+LGGM S + A +L+ EL N Y Sbjct: 342 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 386 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + L+ Sbjct: 387 LMLGGLMVLMMIWRPQGLLPMTRRQLKLK 415 >gi|329911401|ref|ZP_08275505.1| Branched-chain amino acid transport system permease protein livM [Oxalobacteraceae bacterium IMCC9480] gi|327545926|gb|EGF31026.1| Branched-chain amino acid transport system permease protein livM [Oxalobacteraceae bacterium IMCC9480] Length = 404 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 99/379 (26%), Positives = 170/379 (44%), Gaps = 40/379 (10%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + F + N + + + +++F F+ ++ + L+Y+M A GL+IVVG Sbjct: 3 NYFDTKTNPRKAYIGMGIIALIVIVFPFIAQNYGNSWV-RIMDFALLYIMLALGLNIVVG 61 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRY--------------------------------G 89 GLL L + YA+GAY +L S Sbjct: 62 FAGLLDLGYIAFYALGAYLTALLASPQFAVVLESFVNQYPAIGNALVALFGPEIREHGIH 121 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW---KPITNG 146 LSIW ++P+SA+ +G G ++G P+LK RGDYLAI TL EI + + ITNG Sbjct: 122 LSIWFIVPLSALFAGVFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNGPVNITNG 181 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFR---FPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 GI + D + G ++ F S + YY L +C + + L+ Sbjct: 182 PQGINMIDPIRIFGVSLAGEPGSRANLVFGSFSMPSVNAYYYFFLALCIAIIFVSVRLQD 241 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 + + AW IR+++ A ++ KL AFA+ ++F G+AG+ FA+ + +SP+ F Sbjct: 242 SRLGRAWVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGSMFASFQGFVSPESFSL 301 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTT 322 +E+I V+++V+LGGM + + IL + E+ ++ + Sbjct: 302 TESIAVLAMVVLGGMGHIPGVILGGIILAALPEVLRHTVEPIQMAIFGKVWIDAEVLRQL 361 Query: 323 LMVIALFLVILMRSHSLLR 341 L +A+ +++L R L Sbjct: 362 LYGLAMVVIMLSRPAGLWP 380 >gi|330815032|ref|YP_004358737.1| ABC transporter related protein [Burkholderia gladioli BSR3] gi|327367425|gb|AEA58781.1| ABC transporter related protein [Burkholderia gladioli BSR3] Length = 594 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + L + G + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 LFWAFTIVLFALPVLPGVLRIPEYWVTLLNYIGLYSIVAIGLVLLTGVGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ +L + YGLS WL + +++ +++G +++ G +L + T+ Sbjct: 69 GIGAYATALLSTGYGLSPWLGLIAGVIVTAVVALVLGAVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + GI L G T+ + +YY++ + + Sbjct: 129 YLFGNLDLL-GKYDGINGIPALRVFGITLDT--------------GRSLYYLIWLVVIAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IASVRNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVLIFVYAAVLASVSGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F + I + + ++GG+ + AIL + + + F Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVAHVWGAVLGAAILTVLQDWLQSLLPRLLGQDGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + +++ + Sbjct: 292 -----EIIVFGVVMVVLLQTARDGVWP 313 >gi|121606408|ref|YP_983737.1| ABC transporter-like protein [Polaromonas naphthalenivorans CJ2] gi|120595377|gb|ABM38816.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 643 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 16/290 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+A + L L + S Y M I+IY + +GL IVVG G +SL + + Sbjct: 6 LVAAIIGLALLAAVPLMTSNSYYIHMVGTIMIYAILLYGLDIVVGYTGQVSLGHAGLFGV 65 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G+Y+ +L + G +WL+IP S ++ G ++ LP+L+ G YLA+ TL I Q + Sbjct: 66 GSYTAGVLFLKLGAPLWLIIPASIAVTAGFGALLALPALRVTGPYLAMVTLAFGTIIQIL 125 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + +T G GI + Y+++ + +S Sbjct: 126 INEMNFLTEGPLGITIPKPSIAGYKLDEH----------------GFYWLVFALMVVSLV 169 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + ++ + A+ +R + A + ++ K+ AF +S+ F G+AG +A S I Sbjct: 170 VVDRILKSQLGRAFEALRGSPVASDCMGVSVYRYKVYAFVISAGFAGLAGCLYAYSEQYI 229 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 SP+ + F ++ + VI+GG + S AI++ + +L + + Sbjct: 230 SPNTYNFELTVLFLLAVIMGGRKTRSGALLGAAIIVILPKLLDDLELFRI 279 >gi|295095496|emb|CBK84586.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 424 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 98/339 (28%), Positives = 158/339 (46%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ ++ + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 97 IIPLIVTLAICFPFVATKYVLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 156 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+++ G ++G P L+ GDYLAI TL EI + +L Sbjct: 157 GLALGYQYLGLGFWSMLPLAALMAAGAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 216 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ +F R FF + + IF+Y VL + Sbjct: 217 WLTFTGGPNGVSAPAPTFFGLEFGRRAKEGGVPFHEFFGLTYNPNLKFIFIYAVLFLVVM 276 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA Sbjct: 277 LVLYIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGIAGVFFATY 336 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Y Sbjct: 337 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVLAAFVLTVTPELLRSFAEY-------- 388 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + ++++ R L+R+ + + Sbjct: 389 -------RVLLFGMLMVVMMIWRPRGLIRINRSGFAVRK 420 >gi|115525794|ref|YP_782705.1| ABC transporter related [Rhodopseudomonas palustris BisA53] gi|115519741|gb|ABJ07725.1| ABC transporter related [Rhodopseudomonas palustris BisA53] Length = 589 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 118/326 (36%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L +V+ L++ + + I + + A GL ++ G GL S Sbjct: 4 LLPVLVFALVVAALPLIPGLPPFWIVLLDNIGLAALVAMGLVLLTGVGGLTSFGQAAFCG 63 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ +L + YG S WL +P + +SGA +++GL +++ G YL + T+ Sbjct: 64 FGAYTTAVLTTAYGWSPWLTLPAALAVSGAAAVLLGLMTVRLSGHYLPLGTIAWGISLFY 123 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + K + + GI L G + +Y+V+ L A Sbjct: 124 LFSKLEIL-GRNDGISGIPPLAIGGFKMLD--------------PGAIYFVIWAAVILCA 168 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + + L + A R +R A + AKL F ++ G++G +A + Sbjct: 169 LLTMNLLDSRTGRAIRALRRGHIAAEAFGVQTARAKLLVFIYAAVLAGLSGWLYAHFQRA 228 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +P F I + I ++GG + I++ + E+ F Sbjct: 229 ANPTPFGPQAGIEYLFIAVVGGAGYVWGAVLGAGIVVVLKEVLQSTLPALFGGQ------ 282 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + L +++ + + Sbjct: 283 -GQLEIIVFGTLLVVLLQLAPGGVWP 307 >gi|297198974|ref|ZP_06916371.1| branched-chain amino acid ABC transporter permease [Streptomyces sviceus ATCC 29083] gi|197711104|gb|EDY55138.1| branched-chain amino acid ABC transporter permease [Streptomyces sviceus ATCC 29083] Length = 592 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 75/359 (20%), Positives = 139/359 (38%), Gaps = 29/359 (8%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R ++ + + T++ + ++G+ ILI+ A GL+IVVG GLL Sbjct: 225 RFSRIVARNRSFTLAMGFAAAIAFPFTQTNDHYANIGVNILIFGTVALGLNIVVGLAGLL 284 Query: 67 SLNCVIAYAIGAYSYVILG-------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 L V +GAY+ ++ S W A S G+++G P+L+ RG Sbjct: 285 DLGYVAFLGVGAYTAALVSGSEFSRFSGVHFPFWAAALTGAAASLVFGVLIGAPTLRLRG 344 Query: 120 DYLAIATLIMSEIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 DYLAI TL EIF+ + + G + L +L + + Sbjct: 345 DYLAIVTLGFGEIFRIAVNNMDGDSGPDLTNGPNGIPAIPDLNFFGFNLGQAHDVAGFTL 404 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 Y +++ + + + + I +W IR+++ A ++ KL AFA+ Sbjct: 405 GRFANYYLLMVLIMAIVVLVYTRAADSRIGRSWIAIREDETAATAMGINGFRVKLIAFAL 464 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILI 292 + G+AG A + P ++F+ + +++ V+LGGM +++ A+L Sbjct: 465 GATLAGLAGTVSAHVTYSVVPTPYQFAGSTPPNSAFLLAAVVLGGMGTVAGPILGAALLY 524 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + E + + IAL L++ R ++ R Sbjct: 525 LLPEKLVFLQD---------------KSLLAFGIALILLMRFRPEGIIANRRRQLEFHE 568 >gi|172065388|ref|YP_001816100.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] gi|171997630|gb|ACB68547.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] Length = 389 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 17/345 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + ++ + + Y + ++YVM A GL++VVG GLL L + Sbjct: 23 VIIGILTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82 Query: 74 YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 YA+GAY+ +L S + + L++PV+ ++ G+++G P+L+ Sbjct: 83 YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLLIVPVAMALAATFGILLGAPTLRL 142 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL EI + + N G + + +L + + Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 YY+ + L I L+ + I AW IR+++ A ++ KL AFA+ Sbjct: 203 PSVYIYYYLFVLCSLLVIWICTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 ++F G++GA F + + +SP+ F +E+++V++ V+LGGM + + +L + E Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTLTESVVVLAGVVLGGMGHIPGVILGAVLLAVLPEF 322 Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + + +A+ ++L RS L Sbjct: 323 LRTTMGPLQQLLFGHEIVDTEVIRQLVYALAMVFIMLYRSEGLWP 367 >gi|148262074|ref|YP_001236201.1| ABC transporter related [Acidiphilium cryptum JF-5] gi|146403755|gb|ABQ32282.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidiphilium cryptum JF-5] Length = 660 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 82/340 (24%), Positives = 130/340 (38%), Gaps = 51/340 (15%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---------------- 83 + Y A GL+IVVG GLL L +AIGAY+Y I Sbjct: 36 IDVAANSCAYAALALGLNIVVGFTGLLDLGYAAFFAIGAYAYGILNSFQLHPHWSAAWAP 95 Query: 84 ---------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + WL++P SA+I+ GM G P+L+ +GDYLAI TL Sbjct: 96 LAAIGFVAKLGAGAAATVHFTFPFWLMLPASAVIAACFGMAFGAPTLRLKGDYLAIVTLG 155 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 EI + W +TNG G+ G + + ++ + Sbjct: 156 FGEIVPIVARNWSSLTNGAEGLNGVGPPVLFGYRFGINATPYYYVGLGLVLLLLF----- 210 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 I L L+ + I AW +R+++ A ++ KL AFA+ + F GM G F Sbjct: 211 --------ISLRLKPSRIGRAWMAVREDEIAASAMGVHTTRLKLLAFAMGAGFAGMTGTF 262 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + A +PDMF +I+V+ +++LGG+ S+ +L + + Sbjct: 263 YIAKLQTATPDMFDLPVSIMVLVMIVLGGLASVWGAILGAVLLELLQAWFLPALSGWVQG 322 Query: 309 L-------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + I L ++L R L+ Sbjct: 323 LGNAIHSPFLQNLELTSASELIFGIILVTMMLYRRDGLVP 362 >gi|328544149|ref|YP_004304258.1| ABC transporter related protein [polymorphum gilvum SL003B-26A1] gi|326413892|gb|ADZ70955.1| ABC transporter related protein [Polymorphum gilvum SL003B-26A1] Length = 844 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 126/335 (37%), Gaps = 35/335 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L KY + +A + L L + + + I+I + GL+++VG GL S Sbjct: 6 LTKYRPLWIGMAALIALPLIMPVIGLT-----VNTASVIVILAIATMGLNLLVGYTGLHS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + + IGAY+ + + + I L I VS +++G L+ RG Y A+ T Sbjct: 61 FGHSMWFGIGAYAAGLAQTHWFAGQIGLPILVSMAFVAVVSLVIGALILRRRGVYFALLT 120 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L + + + +W +T G+ G+ R ++ + YY+ Sbjct: 121 LALVALSYTVAFRWTEVTGGEDGLGGLQRGSLGPISLDNSTN--------------YYYL 166 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + +L L R+ + IR+NQ I KL++F +S+ G+AG Sbjct: 167 VAVIGLAVLFFMLRLERSPFGHVLVAIRENQLRATFQGYNIDRYKLASFVISAVMTGLAG 226 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A +S + + + ++++V++GGM ++ A I EL Sbjct: 227 ALSGFQHYMVSAESTSIALSGEMLAMVVIGGMHNILGPAIGVVFYILFRELFS------- 279 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + I ++ L+ Sbjct: 280 --------IWTTNWLLWFGIVFVGFVIFSPGGLVG 306 >gi|33591818|ref|NP_879462.1| branched-chain amino acid ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33571461|emb|CAE44946.1| branched-chain amino acid ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|332381235|gb|AEE66082.1| branched-chain amino acid ABC transporter, permease protein [Bordetella pertussis CS] Length = 607 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 59/320 (18%), Positives = 130/320 (40%), Gaps = 25/320 (7%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L + L +GA + M ++I ++ A G++++ G G +SL +AIGAY Sbjct: 19 VLAIALAVGAGHADTGTVQMWSFVIINILLAQGINLLTGINGQISLGHAGFFAIGAYVSA 78 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 I +G+ + + ++ +++ G ++ P+ + R YLA+ +L I + + + Sbjct: 79 IALKSWGVPFPVALAMATIVASGVGFLLAGPAGRVREFYLAMMSLGFGLIVYELARELRG 138 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ + + I + + +LL + + ++ Sbjct: 139 VTGGVMGMRGIPSSQIGTLQI----------FGWSIDTVAYFRILLAVLLVVMLMLRNFV 188 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ A+ + ++ A SL + K +A+A+S G+AG F+A ++P+ F Sbjct: 189 KSHYGRAFYAVHVSEIAAGSLGISQAAVKRAAYAISGGLAGLAGGFYAHMIGYLTPESFG 248 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 +I ++ + I+GG+ SL+ + + + N Y Sbjct: 249 LMRSIEILVMSIVGGLGSLAGQVYGAVLFTYLPQKLQAFNDY---------------QYI 293 Query: 323 LMVIALFLVILMRSHSLLRL 342 + + L + + L L Sbjct: 294 VYGLILVFIFTLLPRGLAGL 313 >gi|328950785|ref|YP_004368120.1| Monosaccharide-transporting ATPase [Marinithermus hydrothermalis DSM 14884] gi|328451109|gb|AEB12010.1| Monosaccharide-transporting ATPase [Marinithermus hydrothermalis DSM 14884] Length = 594 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 123/320 (38%), Gaps = 21/320 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L+L +FL + ++ + GL ++ G GL S GAY+ Sbjct: 5 AWALVLLVFLLPLVLPPFYVTLLNFTAFNALVVLGLYLLTGLAGLTSFGQAAFMGAGAYA 64 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 I +R L WL + ++ + SGA ++G +++ +G YL +AT+ ++ W Sbjct: 65 TAIATTRLSLDPWLGLGLAVLTSGAFAWVLGAITVRLKGHYLPLATIAWQVALFIVMGSW 124 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G+ G+ ++ LG +R+ YY+ L+A + Sbjct: 125 ITLTGGRTGLTDLPPVHLLGLELRT--------------PQAFYYLAWSFAVLAAWGVNN 170 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + R +R + A S KL F ++ G+AG +A ++P Sbjct: 171 LVASRSGRMIRALRGDAVAAASFGANPATLKLGVFVLAGVLAGVAGWLYAHFLRFVNPSP 230 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F +I + + ++GG+ +L + +A++ G+ + F F Sbjct: 231 FGLEASIEFLIMGVVGGIAALPGVFLGSALITGLENWLQDLLPRLFGPGGNF-------E 283 Query: 321 TTLMVIALFLVILMRSHSLL 340 + L L++ L Sbjct: 284 IIAFGLVLILILHRAPKGLW 303 >gi|261340306|ref|ZP_05968164.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Enterobacter cancerogenus ATCC 35316] gi|288317396|gb|EFC56334.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Enterobacter cancerogenus ATCC 35316] Length = 429 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 99/318 (31%), Positives = 152/318 (47%), Gaps = 22/318 (6%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY + GL Sbjct: 113 FPFVATKYVLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGL 172 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W ++P++A+++ A G ++G P L+ GDYLAI TL EI + +L W T G G+ Sbjct: 173 GFWTMLPLAALMAAAAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLTFTGGPNGV 232 Query: 151 YVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 +F R FF + + IF+Y VL + L I L R Sbjct: 233 SAPPPTFFGLEFGRRAKEGGVPFHEFFGLTYNPNMKFIFIYAVLFLVVLLVLYIKHRLTR 292 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 I AW +R+++ A S+ + KLSAF + ++ G+AG FFA + ++P F F Sbjct: 293 MPIGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGIAGVFFATYQGFVNPTSFTF 352 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 E+ ++++IV+LGGM S + A +L EL Y L Sbjct: 353 FESALILAIVVLGGMGSTVGVVLAAFVLTVTPELLRSFAEY---------------RVLL 397 Query: 324 MVIALFLVILMRSHSLLR 341 + + ++++ R L+R Sbjct: 398 FGMLMVVMMIWRPRGLIR 415 >gi|307719581|ref|YP_003875113.1| transporter [Spirochaeta thermophila DSM 6192] gi|306533306|gb|ADN02840.1| transporter [Spirochaeta thermophila DSM 6192] Length = 331 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 75/338 (22%), Positives = 145/338 (42%), Gaps = 31/338 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + +L L++V + + + + Y + I V+ A GL+++ G G L++ Sbjct: 6 RDGLVLAGLSIVVVAAVTALVRSGLTTLYTAQVITLSGINVIVALGLNLITGFTGQLAIG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 A+GAY+ + G L + +++ GM++G P+ + RGDYLAI TL Sbjct: 66 HAGFMAVGAYTSALTMMLLGFPPVLGVISGGLLAAVVGMLIGFPTFRLRGDYLAIVTLAF 125 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 E+ + I+I +T G AG+ F ++ +I V+L Sbjct: 126 GEVIRVIIINLPSLTGGAAGLKGVPP----------------FAEGRMLKQIVAMDVVLV 169 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 FL +++ + R++ A IRD++ A ++ + K+ +F +S+ G+ G + Sbjct: 170 FMFLVIALMYTVVRSSYGRALIAIRDDEIAAHTMGIDVFGYKMFSFTLSAFIAGLGGGLY 229 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A ++P F F +++ ++ IV+ GGM S++ A +L + E + Y Sbjct: 230 APFFGYLTPQTFTFLKSVEILIIVVFGGMGSITGTVVAGFLLTSLQEFLRFLKDY----- 284 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R L R S Sbjct: 285 ----------RMVIYPLILIVMMLFRPQGLFGEREISI 312 >gi|33603669|ref|NP_891229.1| branched-chain amino acid ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|33577794|emb|CAE35059.1| branched-chain amino acid ABC transporter, permease protein [Bordetella bronchiseptica RB50] Length = 604 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 59/320 (18%), Positives = 130/320 (40%), Gaps = 25/320 (7%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L + L +GA + M ++I ++ A G++++ G G +SL +AIGAY Sbjct: 16 VLAIALAVGAGHADTGTVQMWSFVIINILLAQGINLLTGINGQISLGHAGFFAIGAYVSA 75 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 I +G+ + + ++ +++ G ++ P+ + R YLA+ +L I + + + Sbjct: 76 IALKSWGVPFPVALAMATIVASGVGFLLAGPAGRVREFYLAMMSLGFGLIVYELARELRG 135 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ + + I + + +LL + + ++ Sbjct: 136 VTGGVMGMRGIPSSQIGTLQI----------FGWSIDTVAYFRILLAVLLVVMLMLRNFV 185 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ A+ + ++ A SL + K +A+A+S G+AG F+A ++P+ F Sbjct: 186 KSHYGRAFYAVHVSEIAAGSLGISQAAVKRAAYAISGGLAGLAGGFYAHMIGYLTPESFG 245 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 +I ++ + I+GG+ SL+ + + + N Y Sbjct: 246 LMRSIEILVMSIVGGLGSLAGQVYGAVLFTYLPQKLQAFNDY---------------QYI 290 Query: 323 LMVIALFLVILMRSHSLLRL 342 + + L + + L L Sbjct: 291 VYGLILVFIFTLLPRGLAGL 310 >gi|258516925|ref|YP_003193147.1| inner-membrane translocator [Desulfotomaculum acetoxidans DSM 771] gi|257780630|gb|ACV64524.1| inner-membrane translocator [Desulfotomaculum acetoxidans DSM 771] Length = 328 Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 20/328 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ LLFL L Y+ S+ I I IY + GL +++G G +S + I Sbjct: 3 VIITSVLGLLFLALPFIIKSNYLLSILIVIGIYTLVVEGLGLLMGYAGQVSFGQAAFFGI 62 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G+Y+ IL +RY + + +I A I+G P+LK R YLA+ATL + Sbjct: 63 GSYTVAILTARYHWDTVAALLAAVVIPSAVAFIIGRPTLKLRELYLALATLAFGLLVHIA 122 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + +T G +G+ L F + +I YY++ L Sbjct: 123 FNEGRELTGGPSGLTGIPYLS--------------FAGLILNRDIHFYYLVWAFVLLVFL 168 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L R+ I A R IRD++ A + KL AF S+ G+AG +A + Sbjct: 169 AVRNLDRSRIGRAMRAIRDSELAAEANGINTALLKLQAFVFSAFLAGLAGGIYAYYITFV 228 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F F+ ++ + + ++GG+ ++ +++ + E+ Sbjct: 229 SPSPFGFNMSVQFVLMAVVGGLGTVWGPVLGVGLVVALGEVLRWFIPLVMPRAGG----- 283 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRT 344 I L LV++ R L Sbjct: 284 -EYQIVFFGIILVLVMIFRPEGLSGRWR 310 >gi|239905775|ref|YP_002952514.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239795639|dbj|BAH74628.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 321 Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 74/323 (22%), Positives = 125/323 (38%), Gaps = 30/323 (9%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + T +Y S+ I + + A GL++++G G +SL Y +GAY+ I +R+G Sbjct: 23 VPYTLPNEYYLSICILGALNAVIAVGLNLLMGYAGQVSLGHAAFYGLGAYATAIATTRFG 82 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L I + + ++ ++ P+LK +G YLA+ATL I + + T G +G Sbjct: 83 LPIPAGMAIGVSLATVVAWVVAAPTLKLKGHYLAMATLGFGIIVSIVFNEAVDATGGPSG 142 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 RL G S Y ++ + + L L ++ A Sbjct: 143 YVGIPRLALFGYEFTSDH--------------SYYNLMAVVLTFVVLLSLNLMKSRTGRA 188 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + ++KA SL I K F +S+A G+AG +A I+P F F ++ + Sbjct: 189 LRALHVSEKAAASLGVDIAAHKRFVFVLSAALAGLAGVLYAHYLSFIAPASFGFGFSVQL 248 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +V+LGGM S+ L + E + L Sbjct: 249 VVMVVLGGMASVWGSVAGALFLTALPEALREFED---------------IDILVYGAILV 293 Query: 330 LVILMRSHSLL-RLRTPSNFLER 351 L I+ L L + R Sbjct: 294 LTIMFLPDGLAGGLSRLTRRFRR 316 >gi|117928291|ref|YP_872842.1| inner-membrane translocator [Acidothermus cellulolyticus 11B] gi|117648754|gb|ABK52856.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidothermus cellulolyticus 11B] Length = 435 Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 86/339 (25%), Positives = 137/339 (40%), Gaps = 27/339 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L A L + + L S + + QI +YV+ A GL++VVG GLL L + YAI Sbjct: 98 LAAYGVLLAVAIVLPLVLSPYWQEVAVDQIGVYVLLALGLNVVVGLAGLLDLGYIAFYAI 157 Query: 77 GAYSYVILGSRYGLSIWLLI------PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 GAYS + ++ P + + G+I+G P+L+ RGDYLAI TL Sbjct: 158 GAYSCAYWTDSLPIHPPFVLNPFATIPFAIAAAMLAGVILGAPTLRLRGDYLAIVTLGFG 217 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 EI + +T G G + I F + I + YY+LL Sbjct: 218 EIITIYATNLQSVTGGSPGNSRPIPHF--------SINLFGLHYRWGIDNMPYYYLLLAF 269 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + L + + AW IR+++ A + KL AFA+ ++ G AG FA Sbjct: 270 VVMVIVFFHNLENSRVGRAWTAIREDEVAAAASGVNTFRYKLLAFAIGASTSGFAGVLFA 329 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + I+P F ++I+++ +VI GGM S+ AI+ Sbjct: 330 SKIQTITPLSFLLQQSILILVLVIFGGMGSIPGAIVGAAIIQWFPNGLKTYVRKEDL--- 386 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + L ++++ R L+ R + L Sbjct: 387 ----------FLYLGALLVVMMIYRPQGLIPSRRRAREL 415 >gi|254391542|ref|ZP_05006742.1| branched-chain amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] gi|197705229|gb|EDY51041.1| branched-chain amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] Length = 588 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 79/359 (22%), Positives = 139/359 (38%), Gaps = 28/359 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +RL+ + ++ T++ + + ILI+ A GL+IVVG GL Sbjct: 216 VRLSALTAKYRQVTMIAAFTAAAAFPFTQNTDTYTLIAVNILIFATVALGLNIVVGLAGL 275 Query: 66 LSLNCVIAYAIGAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 L L V +GAY+ ++ W + A++S G+I+G P+L+ RG Sbjct: 276 LDLGYVAFLGVGAYTAALVSGSTASAFDVQFPFWASVLTGAVVSLIFGVIIGAPTLRLRG 335 Query: 120 DYLAIATLIMSEIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 DYLAI TL EIF+ + ++ G + L + + Sbjct: 336 DYLAIVTLGFGEIFRIAMGNLDGVSGPHITNGPNGIPNIPDLEFFGYNFGEPHTVLGVEL 395 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 Y ++L L + + I AW IR+++ A ++ KL AFA+ Sbjct: 396 GSYANYYLLMLLAMVLVVVVFTRAENSRIGRAWVAIREDETAATAMGINGFRVKLIAFAL 455 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILI 292 + G+AG A + + P+M++F+ + +++ VILGGM ++S +L Sbjct: 456 GATLAGVAGTVQAHVQHTVVPEMYQFAGPVPPNSAFLLAAVILGGMGTVSGPLLGATLLY 515 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + Y IAL +++ R L+ R Sbjct: 516 MIPAKLQFLQDYQLLG---------------FGIALIVLMRFRPEGLIANRRAQLEYHE 559 >gi|90425652|ref|YP_534022.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90107666|gb|ABD89703.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 357 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 150/343 (43%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF +++ + ++ V + +Y S+ IQI IY + A GL+I+VG Sbjct: 21 TIFPTPMSRNAALAGIVVVCFA--------PLLLSEYWLSILIQIGIYGIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +S+ + +GA++ + + + ++ IP+S +I+ G+I GLP+ + +G Y Sbjct: 73 FTGQISIGHAAFFLLGAFTSAYISNTLPIPVFFAIPLSGVITALVGLIFGLPAARLKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L IATL I + + + + G V ++ + F + + Sbjct: 133 LVIATLAAQYILLDFFSRAEWFSGGS---------------VPAMAQPFSLFGYVLRGDR 177 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +YV+L S ++ L R+ A +RD+ + + + + +F +++ F Sbjct: 178 QYFYVVLAYVLASYLLVTNLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFF 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE----L 297 G+AGA +A + +S + F +II +++VI+GG S+ TA ++ + E L Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSIIFLAMVIIGGTGSIMGTLMGTAFVVLLPESMEWL 297 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + L + + + + + L ++ L Sbjct: 298 SASLKGGAIDRALSLNNNLTFLREIAIGVIIILFLIFEPDGLA 340 >gi|270262690|ref|ZP_06190961.1| transporter [Serratia odorifera 4Rx13] gi|270043374|gb|EFA16467.1| transporter [Serratia odorifera 4Rx13] Length = 428 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 102/339 (30%), Positives = 158/339 (46%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ + + L + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 101 IIPLMAVIALLFPFVATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P+ A+++ G ++G P L+ GDYLAI TL EI + +L Sbjct: 161 GLALGYQYLGLGFWAMLPLGALMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W +T G GI V F R + F + + IF+Y VL + Sbjct: 221 WMSLTGGPNGISVPAPTLFGLEFGRRAKDGGVPIHEFLGIAYNPNLKFIFIYAVLFLVVL 280 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R I AW +R+++ A SL + KLSAF + ++ G+AG FFA Sbjct: 281 LVLYIKHRLTRMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMMGASTAGLAGVFFATY 340 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Y Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVLAAFVLTVAPELLRSFAEY-------- 392 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + +++ R L+R+ S + Sbjct: 393 -------RVLLFGVLMVAMMIWRPRGLVRISRTSFAPRK 424 >gi|239940461|ref|ZP_04692398.1| branched chain amino acid transport permease [Streptomyces roseosporus NRRL 15998] gi|239986944|ref|ZP_04707608.1| branched chain amino acid transport permease [Streptomyces roseosporus NRRL 11379] gi|291443892|ref|ZP_06583282.1| branched chain amino acid transport permease [Streptomyces roseosporus NRRL 15998] gi|291346839|gb|EFE73743.1| branched chain amino acid transport permease [Streptomyces roseosporus NRRL 15998] Length = 612 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 80/347 (23%), Positives = 140/347 (40%), Gaps = 28/347 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + T+S ++G+ ILI+ A GL+IVVG GLL L V +G Sbjct: 268 VTLAGAFAAAAAFPFTQSNDQYATIGVNILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 327 Query: 78 AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AY+ ++ L W I V A+ S G+++G P+L+ RGDYLAI TL E Sbjct: 328 AYAAALVSGSPTSPFGIHLPFWQAILVGAVASMIFGVLIGAPTLRLRGDYLAIVTLGFGE 387 Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 IF+ ++ + G + L + ++++L Sbjct: 388 IFRIGVLNLDGTSGPDITNGSNGISSIPNLNLFGFDFGATHSIAGFTIGRFANYFFLMLL 447 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + I AW IR+++ A ++ KL AFA+ + G+AGA Sbjct: 448 VTLIVVVVFRRSAESRIGRAWVAIREDETAAEAMGINGFRTKLIAFALGATLAGLAGAVQ 507 Query: 250 AASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A ++P+ ++F+ + +++ V+LGGM ++S A+L + M+ Y Sbjct: 508 AHVTYTVTPEQYQFAHAVPPNSAFLLAAVVLGGMGTISGPLVGGALLFLIPAKLQFMSDY 567 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +AL L++ R L+ R Sbjct: 568 ---------------QLFAFGLALVLLMRFRPEGLIANRRQQLEFHE 599 >gi|331697659|ref|YP_004333898.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326952348|gb|AEA26045.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 389 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 73/346 (21%), Positives = 141/346 (40%), Gaps = 29/346 (8%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQ-KYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 R ++ ++ ++ ++Y L L T + + + A GL++VVG GL Sbjct: 37 RPQQWAWLVPVVVLIYALPLLNPPLLTTEPGTNFPLALFDVARFALIAIGLNVVVGQAGL 96 Query: 66 LSLNCVIAYAIGAYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 L L V +AIG+Y +L S + + +P++ ++ G+I+G P+L+ RGDY Sbjct: 97 LDLGYVGFFAIGSYVAALLTSPDSVLWHIPYLWTLPLAMAVTMVFGLILGAPTLRLRGDY 156 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI + + +P+ V V Sbjct: 157 LAIVTLGFGEIVRLLATIVEPLKGQVGFQSVGHPP---------GTNSEGNAIFAVSNGT 207 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 Y++ + + + ++ L R+ + AW IR+++ A + I KL AF + +A Sbjct: 208 PWYWLCVTITIIVLFLVGNLERSRVGRAWVAIREDEDAAEIMGVATIRFKLWAFVIGAAI 267 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G++GA FA ++ F +++ ++ V+LGG + + ++ + + Sbjct: 268 GGLSGALFAGQIGFVNNQKFDVPTSVLFLAAVVLGGSGNKVGVILGAFVVSYIPNRFVEL 327 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 Y + +AL ++++ R LL R Sbjct: 328 AAY---------------KYLIFGVALIVLMIFRPQGLLGARQRLL 358 >gi|149926227|ref|ZP_01914489.1| probable amino-acid transmembrane abc transporter protein [Limnobacter sp. MED105] gi|149825045|gb|EDM84257.1| probable amino-acid transmembrane abc transporter protein [Limnobacter sp. MED105] Length = 357 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 104/347 (29%), Positives = 158/347 (45%), Gaps = 17/347 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + +V L L A + L+YVM A GL+IVVG GLL L + Y Sbjct: 11 IIGFLLVAVALAALPWVAGLIGNSWVRILNIALLYVMLALGLNIVVGFAGLLDLGYIAFY 70 Query: 75 AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY Y +L S + LSIWL+IP+ A+I+ G+++G P+L+ R Sbjct: 71 AVGAYVYGLLASPHLTDNFETIAALFPDGLHLSIWLMIPLGALIAALFGVLLGAPTLRLR 130 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + L N G + + + R V Sbjct: 131 GDYLAIVTLGFGEIIRLFLNNLNAPVNITNGPQGINMIEPVEIAGVRFSRTVDLFGIEVP 190 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+ L + + I + L+ + I AW IRD++ A S+ KL AFA+ Sbjct: 191 ALHLYYYLFLALTLIIIVICMRLQNSRIGRAWTAIRDDEIAAKSMGINTRNMKLLAFALG 250 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 ++F G+AGA F+A + ISP+ F E+IIV+ +V+LGGM + + +L G E+ Sbjct: 251 ASFGGVAGAMFSAFQGFISPESFGLMESIIVLCMVVLGGMGHIPGVILGALLLAGFPEML 310 Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + L + + + + + LV+L R + L R Sbjct: 311 RQVVTPVQEFLFGTVLVDAEILRSLIYGLTMVLVMLYRPNGLWPHRK 357 >gi|291614042|ref|YP_003524199.1| ABC transporter [Sideroxydans lithotrophicus ES-1] gi|291584154|gb|ADE11812.1| ABC transporter related protein [Sideroxydans lithotrophicus ES-1] Length = 888 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 69/327 (21%), Positives = 131/327 (40%), Gaps = 27/327 (8%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 +L A + +L + S Y+ + + IY + GL I VG LG ++L Sbjct: 2 KRILLVNGAELLAFILLACIPLAVSNSYVLGLLTLLAIYGILLIGLDISVGYLGQVNLGH 61 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +GAY+ + +G S+ + S ++ G ++ P+L+ G A+ATL S Sbjct: 62 AAFLGLGAYAGALCVMDFGFSMLPALLASLLVGLVFGGLLAFPALRLEGPQFALATLSFS 121 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + L + + IT G G+ V L F + +++ L + Sbjct: 122 ALTVTTLNEMESITQGAQGLQVDRPL----------------LLGFHLGPQAFFWMCLVL 165 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L+ + L + A+ +RD+ A ++ + K++AFA+ S G+AG +A Sbjct: 166 LALTWVAMKNLLSSHWGRAFEALRDSPIATDAMGVGVFRHKVAAFALGSGLGGLAGGLYA 225 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + P+ F + +I++ V+LGG SL +++ + L + S + Sbjct: 226 FNFQFLQPNSFVYELMVILLLGVVLGGRKSLWGAFIGACLIVLLPNLLSNRTLFQAFSFI 285 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSH 337 L + L +I R Sbjct: 286 G-----------LFMALLAGIISFRRQ 301 >gi|115526224|ref|YP_783135.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115520171|gb|ABJ08155.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 357 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 69/343 (20%), Positives = 145/343 (42%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF +++ IL ++ V + +Y S+ IQI IY + A GL+I+VG Sbjct: 21 TIFPTSMSRNFAILGIVLVCFA--------PLLLNEYWLSILIQIGIYGIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +S+ + +GA++ L + + ++ IP++ +++ G+I GLP+ + +G Y Sbjct: 73 FTGQISIGHAAFFLLGAFTSAYLSNHLPIPVFFAIPLAGVVTALVGLIFGLPAARLKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L IATL I + + + T G F Sbjct: 133 LVIATLAAQYILIDFFSRAEWFTGGSVPASANPFSIFGYVLRGDRQY------------- 179 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +YV+L +S ++ L R+ A +RD+ + + + + +F +++ F Sbjct: 180 --FYVVLAYVLVSYLLVTNLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFF 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA +A + +S + F +I+ ++++I+GG S+ TA ++ + E + Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPEAMEWI 297 Query: 302 N----FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + L + + + + + ++ L Sbjct: 298 SMELKGGAIDRALSLNTNLTFLREISIGLIIIAFLVFEPDGLA 340 >gi|119718660|ref|YP_925625.1| ABC transporter related [Nocardioides sp. JS614] gi|119539321|gb|ABL83938.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Nocardioides sp. JS614] Length = 603 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 73/343 (21%), Positives = 132/343 (38%), Gaps = 31/343 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 L + +L + Y +M I LI+ + A GL+I+ G G +SL Sbjct: 2 KPIWLGRAVALAAGVLLVAYPMLSDDIYYQNMIILSLIFAVGASGLNIISGFAGYISLGQ 61 Query: 71 VIAYAIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 +G Y+ +L RY S WL +P+ +++ +I+G SL+ RG I T+ Sbjct: 62 GAFLGLGGYTIGVLAGRYPDASPWLWVPLGGIVAAGVALILGFVSLRSRGPAFVIITVAF 121 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + Q I + W +TNG G+ + + YYVL+ Sbjct: 122 LFLVQVIAVNWVSLTNGTTGLTLPLPTWDRDIMNWP-----------------FYYVLVA 164 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L + W+RRT + IR+++ ++ + K+ AF S+ F+GMAGA + Sbjct: 165 ILALQLLMTWWIRRTKLGMGLIAIREDETKAATIGINLPVQKIIAFMASALFVGMAGAVY 224 Query: 250 AASRDRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 I P MF ++ ++ +++GG +L ++ + E+ Sbjct: 225 GYYLTFIDPRGMFSILISVQLVLSMLIGGKATLWGPVIGAFLVEWLNEMANN-------- 276 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 D L L V++ ++ + R Sbjct: 277 ----DWGGGNTRLFLFGGLLMAVVIFLPKGIIPAIESALSWRR 315 >gi|311108036|ref|YP_003980889.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310762725|gb|ADP18174.1| inner-membrane translocator 49 [Achromobacter xylosoxidans A8] Length = 593 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 65/331 (19%), Positives = 135/331 (40%), Gaps = 25/331 (7%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L+ + + ++ + + ++ + +IV G G LSL + Y IG Y+ Sbjct: 14 LILLISMFLVPVVMGTPFWTNLFVLLFVFSALSVAWNIVGGYAGQLSLGHAVFYGIGGYT 73 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L +G+S W + A+ISGA +++ P+L+ RG + A+AT+ + E+ + ++I Sbjct: 74 ATLLTQNFGISPWFGMLAGAVISGAVAILISYPTLRLRGPFFALATIAILEVVRLLVIHE 133 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + T G +GI + + + R + + G+ L + Sbjct: 134 ESWTGGSSGISLPLNIGWTWIVFREK--------------VNYVIIAFGLFLLVTWASWY 179 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +R++ I + IR+ + A ++ + K+ A VS+ + G F + P Sbjct: 180 IRKSRIGHYLIAIREREDAALAVGIHTVRMKIIAAVVSAMLTSIIGTFHITYLTFVDPSS 239 Query: 261 -FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F +I V ++GG+ +++ T +++ + EL G N + Sbjct: 240 AFSLELSIQVAMFALIGGLGTVAGPIAGTFLVLPIAELARGWLSSVGNGM---------- 289 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 H + + L V+L L P+ Sbjct: 290 HGLIYGLILVAVVLTIPRGLAGAFGPTIERW 320 >gi|294812035|ref|ZP_06770678.1| Branched chain amino acid transport permease [Streptomyces clavuligerus ATCC 27064] gi|326440572|ref|ZP_08215306.1| ABC transporter integral membrane subunit [Streptomyces clavuligerus ATCC 27064] gi|294324634|gb|EFG06277.1| Branched chain amino acid transport permease [Streptomyces clavuligerus ATCC 27064] Length = 585 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 79/359 (22%), Positives = 139/359 (38%), Gaps = 28/359 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +RL+ + ++ T++ + + ILI+ A GL+IVVG GL Sbjct: 213 VRLSALTAKYRQVTMIAAFTAAAAFPFTQNTDTYTLIAVNILIFATVALGLNIVVGLAGL 272 Query: 66 LSLNCVIAYAIGAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 L L V +GAY+ ++ W + A++S G+I+G P+L+ RG Sbjct: 273 LDLGYVAFLGVGAYTAALVSGSTASAFDVQFPFWASVLTGAVVSLIFGVIIGAPTLRLRG 332 Query: 120 DYLAIATLIMSEIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 DYLAI TL EIF+ + ++ G + L + + Sbjct: 333 DYLAIVTLGFGEIFRIAMGNLDGVSGPHITNGPNGIPNIPDLEFFGYNFGEPHTVLGVEL 392 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 Y ++L L + + I AW IR+++ A ++ KL AFA+ Sbjct: 393 GSYANYYLLMLLAMVLVVVVFTRAENSRIGRAWVAIREDETAATAMGINGFRVKLIAFAL 452 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILI 292 + G+AG A + + P+M++F+ + +++ VILGGM ++S +L Sbjct: 453 GATLAGVAGTVQAHVQHTVVPEMYQFAGPVPPNSAFLLAAVILGGMGTVSGPLLGATLLY 512 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + Y IAL +++ R L+ R Sbjct: 513 MIPAKLQFLQDYQLLG---------------FGIALIVLMRFRPEGLIANRRAQLEYHE 556 >gi|323700060|ref|ZP_08111972.1| inner-membrane translocator [Desulfovibrio sp. ND132] gi|323459992|gb|EGB15857.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132] Length = 396 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 102/326 (31%), Positives = 160/326 (49%), Gaps = 29/326 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ ++ + +++Y + I +LIYV GL++VVG GLL L + Y +GA Sbjct: 91 LLLGIVMAGAIVYPLVTERYAHDVAISVLIYVCLGLGLNVVVGLAGLLDLGYIAFYGVGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y IL YGLS WL +P++A I+ G I+G P+L+ RGDYLAI TL EI + +L Sbjct: 151 YTYAILSINYGLSFWLCLPIAAFIAAIAGCIIGYPTLRMRGDYLAIVTLGFGEIVRLVLN 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +TNG GI R G RS MYYV+LG+ ++ + Sbjct: 211 NWMSLTNGPNGILSIPRPELFGYEFRS--------------LSSMYYVILGLAVVTILAV 256 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + + AW IR+++ A + KL A+A+ + F G AGAFFAA + P Sbjct: 257 YRLNYSRVGRAWEAIREDETAAELMGVNTFLLKLLAYAMGATFAGFAGAFFAARMKFVGP 316 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F F E+ +V+++VILGGM S+ + L+ + E+ Y Sbjct: 317 ESFTFLESAMVLAMVILGGMGSIPGVILGVLALVALPEVFREFELY-------------- 362 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRT 344 + A+ L++L+R + + Sbjct: 363 -RMLVFGGAMTLMMLIRPAGIWPAKR 387 >gi|148260858|ref|YP_001234985.1| ABC transporter related [Acidiphilium cryptum JF-5] gi|326404252|ref|YP_004284334.1| putative ABC transporter permease/ATP-binding protein [Acidiphilium multivorum AIU301] gi|146402539|gb|ABQ31066.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Acidiphilium cryptum JF-5] gi|325051114|dbj|BAJ81452.1| putative ABC transporter permease/ATP-binding protein [Acidiphilium multivorum AIU301] Length = 599 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 143/324 (44%), Gaps = 29/324 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +L+ L + Y ++ I L Y + A GL++++G G +SL + IGA Sbjct: 11 FIALLVLIPFLLPGGRLGSYYLTLLILSLSYAVAALGLTVLLGYSGQISLAQAAFFGIGA 70 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ IL + + W + ++ G+ +G SL+ YLA+ T+ I + +L Sbjct: 71 YTFSILAVNHHIGYWSAALAAVAVTTGFGLFLGAISLRLASHYLALVTIGFQIITELVLN 130 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T+G GI R G + S F Y++ + + L++ ++ Sbjct: 131 NWNAVTDGADGISNIPRPSLFGYAINSDHGF--------------YFISVAVLVLASYVV 176 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 LR + + A +R+++ A + ++ K+ AFAVS+A M G +A+ ISP Sbjct: 177 FRLRHSRLGGALFALREDEIAASANGISLFRTKVLAFAVSAALAAMGGILYASGSLYISP 236 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 ++F F +++ ++ ++GG S+ ++ + E+ ++ YY Sbjct: 237 NVFNFYQSVSFFAMALVGGQASIVGTTLGAGLITFLPEVLRFLHAYYIA----------- 285 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + + +V+L L L Sbjct: 286 ----VYGVLVVVVVLFMPEGLYGL 305 >gi|257095981|ref|YP_003169622.1| ABC transporter-like protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048505|gb|ACV37693.1| ABC transporter related [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 590 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 117/321 (36%), Gaps = 22/321 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + L L ++ ++ I +Y + A GL ++ G GL S +GAY+ Sbjct: 11 LLVFMAALVLAPLVLPEFYVTLLNYIGLYAIVALGLVMLTGVGGLTSFGQAAFVGLGAYT 70 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L + +G+S WL +P +++ A + +GL +L+ G +L + T+ + Sbjct: 71 SAYLTTVHGVSPWLTLPAGLLVTAAVAVSLGLVTLRLSGHFLPLGTIAWGISLYYLFGNL 130 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + G GI L ++S F +Y++ + L Sbjct: 131 AAL-GGHTGITGIPSLQLFDLELKSGREF--------------FYLIWAVLLLIVLATRN 175 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + A R +R ++ AK+ F V++ + ++G +A + ++P Sbjct: 176 LLDSREGRAIRALRGGSLMAEAMGVNTPRAKIVIFTVAALYASVSGWLYAHLQRFVNPTP 235 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F ++ I + + ++GG+ + ++ + + F Sbjct: 236 FSLTQGIEYLFMAVVGGVAHVWGAIVGAGLITILKQWLQDWLPRLVGESGNF-------E 288 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + + + V+ + Sbjct: 289 VIVFGLLMIFVLQRARDGVWP 309 >gi|145588544|ref|YP_001155141.1| ABC transporter related [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046950|gb|ABP33577.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 643 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 71/304 (23%), Positives = 133/304 (43%), Gaps = 16/304 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ ++ L Y + ILIY + +GL IVVG +G +SL + IG+Y Sbjct: 10 LLIAIVGLFCLPLFIHNPYYIHLAETILIYTILLFGLDIVVGYVGQVSLGHAALFGIGSY 69 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + I+ GL IW IP S +++ G ++ LP+LK G YLA+ TL I Q ++ + Sbjct: 70 TAGIMFFHLGLPIWATIPASVIVTACFGGLLALPALKVVGPYLAMVTLAFGTIAQILINE 129 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 +T G GI + + ++++ + L+ +I Sbjct: 130 MTWLTEGPLGIKLTRPELMGVPM----------------TKAEYFWLVSIVTILALIVID 173 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 ++ + A+ +RD+ A + ++ K+ AF +S+ F G+AG +A S ISP+ Sbjct: 174 RFVKSQMGRAFEALRDSPVACDCMGVSVYRFKVIAFVISAGFAGLAGCLYAYSEQYISPN 233 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + ++ + +I+GG S AI++ + +L +N + + + Sbjct: 234 TYNNELAVLFLLGIIMGGRKSRLGAVIGAAIIVLLPKLLDDINAFRIVASIIAIVVTAGA 293 Query: 320 HTTL 323 L Sbjct: 294 ILAL 297 >gi|170742762|ref|YP_001771417.1| ABC transporter-like protein [Methylobacterium sp. 4-46] gi|168197036|gb|ACA18983.1| ABC transporter related [Methylobacterium sp. 4-46] Length = 840 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 112/310 (36%), Gaps = 30/310 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 ++++ + GL+I+VG GL+S +GAY+ I + V A+ Sbjct: 33 ATDVVVFAVACLGLNILVGQTGLVSFGHGAFLGLGAYAAAISQRALFPGGLVAPAVFALA 92 Query: 103 SGACGMIMGLPSLKFRG-DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 A ++ + R Y ++ TL +S + + +W +T G++G R Sbjct: 93 FVALAALLVGLLILRRRGVYFSLLTLALSALTFTVAYRWTALTGGESGFGGVVRPS---- 148 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + Y + + F + LRR+A+ + IR+N++ Sbjct: 149 ----------LLGIDLDAPATWYACVAVVGFAVLCGLARLRRSAVGSVLEAIRENEQRAR 198 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 L KL AF +S+A G+AG + S + + + ++++V++GGM SL Sbjct: 199 FLGYPTARYKLLAFTISAAVTGLAGVLEVFTHRFASAEPLGTAFSGELLAMVVIGGMRSL 258 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + A I EL + + IL L+ Sbjct: 259 AGPAIGALFFILFRELLSIWTGDW---------------LFWFGLLFIGFILFSPDGLVG 303 Query: 342 LRTPSNFLER 351 + L R Sbjct: 304 IGRRVLRLIR 313 >gi|154245563|ref|YP_001416521.1| ABC transporter related [Xanthobacter autotrophicus Py2] gi|154159648|gb|ABS66864.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 616 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 134/324 (41%), Gaps = 25/324 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + L L + + A ++ + + I ++ + +I+ G G LSL + Y +G Y Sbjct: 35 ALIALSLLVIIPAWSGSTFMVHVFVTICVFGALSTAWNILGGYAGQLSLGHTVFYGLGGY 94 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L + +GLS W+ + A ++ + +G P + RG + ++AT+ E+ + + I Sbjct: 95 TAALLLTHFGLSPWIGMIAGAALAALVSLGIGYPCFRLRGPFFSLATIAFLEVVRLLSIH 154 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + +T G AG+ V ++ + R I Y+ G+ L ++ Sbjct: 155 FNGVTGGSAGLVVPLQIGWPWMIFREK--------------INYLYIAFGLLVLCLAVSY 200 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 +R + + A +R+ A + I KL A A+S+A + G F A + P Sbjct: 201 AIRHSRLGYALTAVRERDSAAQAAGIDINGVKLWAMAISAALTALVGTFHAMYMTFLEPA 260 Query: 260 M-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F + I + ++GG+ +++ T +++ + EL G S N Sbjct: 261 TLFSLATAIEIAMFALIGGLGTVAGPLLGTVLVVPLAELARG----------WLGASANG 310 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 H + L ++ L L+ Sbjct: 311 LHGFVYGSVLVIITLTLPGGLVGT 334 >gi|56477219|ref|YP_158808.1| putative ABC transport protein [Aromatoleum aromaticum EbN1] gi|56313262|emb|CAI07907.1| putative ABC transport protein [Aromatoleum aromaticum EbN1] Length = 366 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 5/327 (1%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ + + L A + + L+YVM A GL++VVG GLL L + YA+GAY Sbjct: 22 LIVIVAIAAPLVAVLFGRTWVRVLDFALLYVMLALGLNLVVGFAGLLDLGYIAFYAVGAY 81 Query: 80 SYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + L S + L W+++PV+A + G+++G P L+ RGDYLAI TL EI + Sbjct: 82 TAAFLASPHFGVHLPFWIVLPVAAGFAALAGIMLGFPVLRLRGDYLAIVTLGFGEIVRIF 141 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY-VLLGMCFLSA 195 L N G + L L L R + I +F+YY L S Sbjct: 142 LNNLNYPVNITNGPQGINALDPLVLFGWDLSRNLEITENLSINSLFLYYYFFLACVAGSI 201 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I L+ + + AW +RD++ A ++ KL AF++ + F G+AG F A + Sbjct: 202 VFIQRLQVSRVGRAWAAMRDDELAAKAIGINTRNLKLLAFSLGATFGGVAGELFGAFQGF 261 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDC 314 +SP+ F E+I V+++V+ GGM +++ IL + E+ + +L Sbjct: 262 VSPESFSLMESIAVLTMVVFGGMGNVAGAIAGALILSALPEILRHLAVPVQQTLFGTVLL 321 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + L+ +A+ L++L++ L+ Sbjct: 322 DPEVLRMLLLSLAMILMMLLKPAGLIP 348 >gi|296101744|ref|YP_003611890.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056203|gb|ADF60941.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 424 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 158/339 (46%), Gaps = 22/339 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 97 VIPLAIALAICFPFVATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 156 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+++ A G ++G P L+ GDYLAI TL EI + +L Sbjct: 157 GLALGYQYLGLGFWSMLPLAAIMAAAAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 216 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ +F R FF + + IF+Y VL + Sbjct: 217 WLTFTGGPNGVSAPPPTFFGLEFGRRAKEGGVPFHEFFHLTYNPNMKFIFIYAVLFLVVL 276 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA Sbjct: 277 LVLYIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGIAGVFFATY 336 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Y Sbjct: 337 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRSFAEY-------- 388 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + ++++ R L+R+ + + Sbjct: 389 -------RVLLFGMLMVVMMIWRPRGLIRINRSGFAVRK 420 >gi|293602423|ref|ZP_06684869.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292819185|gb|EFF78220.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 640 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 72/377 (19%), Positives = 151/377 (40%), Gaps = 53/377 (14%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 K L LL V + + + Y + I+IY + +GL IVVG G +SL Sbjct: 1 MKPLHLLLSVVAIACLAAVPLGVTNTYYLHLIETIMIYSILLFGLDIVVGYTGQVSLGHA 60 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + IG+Y +L + IW+++P + +I+ A G ++ LP+L+ G YLA+ TL Sbjct: 61 GLFGIGSYVAGVLFFHLQMPIWVILPAAILIAAAFGAVLALPALRVTGPYLAMVTLAFGT 120 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I Q ++ + +T G GI + ++ + ++++ + Sbjct: 121 IIQILINEMTFMTEGPLGIKIPKPS----------------IGGHILTKSEYFWLVGALL 164 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 +S ++ + ++ + ++ +RD+ A + ++ K+ AF +S+ F G+AGA ++ Sbjct: 165 VISLIVVHRILKSHLGRSFEALRDSPIASDCMGVSVYRHKVFAFVISAGFAGLAGALYSY 224 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 S ISP+ + F I+ + +I+GG S + +I++ + ++ + + +L Sbjct: 225 SEQYISPNTYNFELTILFLLAIIMGGRKSRTGALLGASIIVLLPKMLDDIGTFRLIALAV 284 Query: 312 -------------------------------------FDCSFNMRHTTLMVIALFLVILM 334 + + T+ + V+ Sbjct: 285 AVLVTVGSIVAVSKGRAEPRRVVVPVAGTIVLAVFSYWLEAVTDWRLTIFGAMILFVVYY 344 Query: 335 RSHSLLRLRTPSNFLER 351 ++ F R Sbjct: 345 LPDGIVGFVRNLFFSNR 361 >gi|226314578|ref|YP_002774474.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226097528|dbj|BAH45970.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 342 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 79/323 (24%), Positives = 141/323 (43%), Gaps = 24/323 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + L L + +Y S+GI I + + GL +V+G G +SL + IGAY Sbjct: 12 IGIYLFLMVLFPFVMPDEYYRSVGIIIGLQAIVTIGLCLVMGLAGQISLGQAAFWGIGAY 71 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L ++YGL ++ + +A++ G I+G +G YLA+ATL I Q + + Sbjct: 72 TSAVLTTKYGLPPFIGLIAAAIVPGLFAFILGRAIAGLQGYYLAMATLAFGYIVQIGITE 131 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W+P+T G G+ ++ F E+ MY+++ G+ L Sbjct: 132 WEPVTGGANGMISIPQMTFF-----------------GGSELSMYFLIWGVVTCVLLFSL 174 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + + A+R I ++ A S+ + KL+AF VS F G++G +A + P Sbjct: 175 NLLNSRVGRAFRAIHKSEIAATSMGIDVRKFKLNAFVVSGMFAGISGGLYAHYMGILDPQ 234 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F E+I +++V++GGMTS+ T ++ + E ++ Sbjct: 235 PFGLHESIKFLTMVVIGGMTSIWGALVGTILIGFISEGLVLLSE-------VVPGLQGDV 287 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 T + L L I+ L+ Sbjct: 288 DTIVFGAILVLFIMFMPEGLVPR 310 >gi|329911898|ref|ZP_08275625.1| ABC-type branched-chain amino acid transport system [Oxalobacteraceae bacterium IMCC9480] gi|327545776|gb|EGF30907.1| ABC-type branched-chain amino acid transport system [Oxalobacteraceae bacterium IMCC9480] Length = 587 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 121/323 (37%), Gaps = 22/323 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ ++ L + ++ ++ I +Y + A GL ++ G G+ S +GAY Sbjct: 7 VLLFVIFLALLPVLPTPEFWITLANYIGLYAIVALGLVLLTGIGGMTSFGQAAFVGLGAY 66 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L + +GLS WL + I+ +G +++ G YL + T+ + Sbjct: 67 ATAYLTTHFGLSPWLGLLAGLGITALAAFALGAITMRLSGHYLPLGTIAWGLSLFYLFGN 126 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + + G+ + G T++S ++Y++ + ++ + Sbjct: 127 LEFL-GKYDGLNGIPAIELFGLTLQS--------------GRAIFYLIWAVVIVALLALQ 171 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + A R + + ++ + K+ F +++ ++G +A + ++P Sbjct: 172 NLLDSRSGRAMRALNGSGLMAEAMGVNTTWMKIVCFVIAALLACISGWLYAHMQRAVNPT 231 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F + I + + ++GG + +A+L + + + S F Sbjct: 232 PFGLNAGIEYLFMAVVGGAGHVWGALLGSALLTILKDQLQSILPKLLGSNGNF------- 284 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 + + + L++ L L Sbjct: 285 EMIVFGVMMVLLLQRARSGLWPL 307 >gi|288959988|ref|YP_003450328.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288912296|dbj|BAI73784.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 357 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 139/343 (40%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF R ++ IL ++ ++ +Y S+ IQI + A GL+I+VG Sbjct: 21 TIFPTRTSRNFAILGVVLLLAC--------PAFMDRYWLSLLIQIGYLGIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +S+ + GA++ + G+ + L IP++ M++ G++ G+P+ + +G Y Sbjct: 73 FTGQISIGHSAFFGFGAFASAWASNSLGVPVALAIPLAGMMTTLVGLLFGMPAARLKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAIATL I Q+ + T G AG Sbjct: 133 LAIATLAAQYILQDFFARADWFTGGTAGTIAEPLTILGFAFDTDER-------------- 178 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +YV L + + L RT A +RD+ + + + + +F +S+ + Sbjct: 179 -FFYVALVALVVMYILATNLMRTRDGRALVAVRDHYLSAEIMGINLTKYRTMSFGISAFY 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+ GA +A +S + F +I + ++I+GG+ S+ TA ++ + E + Sbjct: 238 AGIGGALYAHYLQFVSVEGFTILFSIQFLGMIIIGGLGSIMGTLMGTAFMVFLPEAMQAL 297 Query: 302 ----NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + ++ L + + + + L ++ L Sbjct: 298 TKLVSGTAIDTALNLKDNIAFLREMSIGLVIILFLVFEPDGLA 340 >gi|56421559|ref|YP_148877.1| branched amino acid ABC transporter permease [Geobacillus kaustophilus HTA426] gi|56381401|dbj|BAD77309.1| branched amino acid ABC transporter (permease) [Geobacillus kaustophilus HTA426] Length = 348 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 132/324 (40%), Gaps = 20/324 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L +V + Y+ S I I +Y + + G+++++G G +SL Y IG Sbjct: 9 LLLVGAAVWLGLPWLVFGNNYVLSTLILIGLYALVSTGMTLLMGYAGQISLGQAAFYGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ L + G WL + A+++ +++G+P + R YLA+ATL I Sbjct: 69 AYASAYLTAHAGWPSWLALAAGAVLAALVALVVGIPVFRLREHYLALATLGFGVIMFTFF 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +WK IT G G + + R + ++ YY++ Sbjct: 129 KEWKEITGGLNGFFGIPPI--------------RIAGVPLQSDLQFYYLVSLFVLAGLWF 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + R+ + A R I ++ A SL I+ KL F +S+ + +AG+ +A I+ Sbjct: 175 AHNIVRSRVGRALRAIHGSEVAASSLGVNIMKYKLQIFMLSAVYASIAGSLYAHYVTFIN 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD+F +I + +V++GG S+ A+ + + E + + Sbjct: 235 PDLFGIVPSIYFLIMVVIGGTASVWGGLIGAAVYVCLGEWLKAVVPLLLPNAGG------ 288 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + L ++++ + L Sbjct: 289 EFEIVFFGLLLVVMLIYMPNGLTG 312 >gi|196249320|ref|ZP_03148018.1| inner-membrane translocator [Geobacillus sp. G11MC16] gi|196211077|gb|EDY05838.1| inner-membrane translocator [Geobacillus sp. G11MC16] Length = 354 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 125/315 (39%), Gaps = 20/315 (6%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 F Y+ S I I +Y + + G+++++G G +SL Y +GAY+ L + Sbjct: 24 LGFPWLVAGNNYLLSTLIIIGVYALVSTGMTLLMGYAGQISLGQAAFYGVGAYTSAYLTA 83 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 G WL + V A+++ ++G+P + R YLA+ATL I + +W+ IT G Sbjct: 84 HAGWPPWLAMAVGAVLAALVAFVVGIPVFRLREHYLALATLGFGVIMFTLFKEWEAITGG 143 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G + + + +I YY++ + R+ + Sbjct: 144 LNGFFGIPPIS--------------VLGMSLQTDIQFYYLVWLFVLAGLWFAHNIVRSRV 189 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A R I ++ A SL I KL F +S+ + +AG+ +A I+PD+F + Sbjct: 190 GRALRAIHGSEVAASSLGVNITKYKLQIFMLSAMYASVAGSLYAHYVTFINPDLFGIVPS 249 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I + +V++GG + A+ + + E + + Sbjct: 250 IYFLIMVVIGGTAGVWGGLVGAAVYVCLGEWLKAVVPILMPDAGG------EFEIVFFGL 303 Query: 327 ALFLVILMRSHSLLR 341 L ++++ L Sbjct: 304 LLIIMLIYMPSGLTG 318 >gi|158929985|gb|ABW82966.1| ABC transporter [uncultured bacterium pEAF66] Length = 403 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 93/377 (24%), Positives = 161/377 (42%), Gaps = 40/377 (10%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F + ++ + V+ LL+F F ++ + L+Y+M A GL+IVVG Sbjct: 6 FDVEHDRKKAFTSMGVVLVLLLIFPFFAQQFGNSWV-RIIDMALLYIMLALGLNIVVGFA 64 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRY--------------------------------GLS 91 GLL L + +A+GAY +L S LS Sbjct: 65 GLLDLGYIAFFAVGAYMTGLLASPQFAALLESVVYQYPVLGEWLIAVMGPEITQTGIHLS 124 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 +WL++P++A +G G ++G P+LK RGDYLAI TL EI + + N G Sbjct: 125 VWLIVPLAAATAGLFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNDPINFTNGPQ 184 Query: 152 VADRLYFLGTTVRSLIRFFR------FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 + + + SL + Y++ L +C + L+ + Sbjct: 185 GINNIDPIRIFGTSLSGEAGSKATVVIGGFSMPSVNAYYFLFLFLCIAIVFVTTRLQHSR 244 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + AW IR+++ A ++ KL AFA+ ++F G+AGA FAA + +SP+ F +E Sbjct: 245 LGRAWVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGAMFAAFQGFVSPESFSLTE 304 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLM 324 +I V+++V+LGG+ + + +L + E+ + L + L Sbjct: 305 SIAVLAMVVLGGIGHIPGVILGGVLLAALPEVLRHVVEPIQMKLFGAVLLESEVLRQGLF 364 Query: 325 VIALFLVILMRSHSLLR 341 +AL ++L + L Sbjct: 365 GLALVGMMLYKPAGLWP 381 >gi|311109339|ref|YP_003982192.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310764028|gb|ADP19477.1| inner-membrane translocator 66 [Achromobacter xylosoxidans A8] Length = 640 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 69/312 (22%), Positives = 143/312 (45%), Gaps = 16/312 (5%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 K L LL + + + + Y + I+IY + +GL IVVG G +SL Sbjct: 1 MKPLHLLLSIVAVACLAAVPLGVTNTYYLHLIETIMIYSILLFGLDIVVGYTGQVSLGHA 60 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + IG+Y +L + IW+++P + +I+ A G ++ LP+L+ G YLA+ TL Sbjct: 61 GLFGIGSYVAGVLFFHLQMPIWVILPTAILIAAAFGAVLALPALRVTGPYLAMVTLAFGT 120 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I Q ++ + +T G GI ++ V+ + ++++ + Sbjct: 121 IIQILINEMTFMTEGPLGIKISKPAIAGH----------------VLTKSEYFWLVAALL 164 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 LS ++ + ++ + ++ +RD+ A + ++ K+ AF +S+ F G+AGA ++ Sbjct: 165 VLSLIVVHRILKSHLGRSFEALRDSPIASDCMGVSVYRHKVFAFVISAGFAGLAGALYSY 224 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 S ISP+ + F I+ + +I+GG S + +I++ + ++ ++ + +L Sbjct: 225 SEQYISPNTYNFELTILFLLAIIMGGRKSRTGALLGASIIVLLPKMLDDISTFRLIALGV 284 Query: 312 FDCSFNMRHTTL 323 + Sbjct: 285 AILVTVGSVIAI 296 >gi|51893498|ref|YP_076189.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51857187|dbj|BAD41345.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 619 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 69/323 (21%), Positives = 132/323 (40%), Gaps = 29/323 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ + L L Y + I+ + A L+++ G+ G +SL A+GA Sbjct: 323 ALPAAGAVALALPLVVRNGYWLQVLATAWIFGLLAISLNLIAGTAGQISLGHAGFLALGA 382 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL +R L + V+ +I+ A G+++ P+L+ RG YLA+AT+ + + + + Sbjct: 383 YASAILTTRLQWPFLLSLAVAPVIAAAVGVVLCYPALRLRGQYLAVATIGLGQGIALVAL 442 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI + Y++ L + + Sbjct: 443 NWTALTRGPLGISNIAPP--------------GLFGVEITSAAGFYWLTLTLLLGGIWVA 488 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + + A R +R+++ A + + K AF +S+ G+AG A + I+P Sbjct: 489 ERLSGSYLGRALRAVREDEVAARAYGVGLERYKSIAFGLSAFIAGLAGVLLAHAYTYIAP 548 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 D F + ++ V+++V+LGG+ + LI + E + Y Sbjct: 549 DTFTHAMSLQVLTMVVLGGLDNTIGAVAGALALIVIPESARFLAEY-------------- 594 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + + L +++ R LL Sbjct: 595 -RFLVYGLLLLVMLRFRPRGLLS 616 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 100/309 (32%), Gaps = 25/309 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y + A G++ + G +++ Y +GA+ + + GL + + + Sbjct: 19 LINGLVVGNLYALTAVGITQIYGVANVINFAHGSLYMVGAFVGWMAVTWLGLPLLPTLLL 78 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + S G+ + +++ L+ + +L + + G Sbjct: 79 VLVASALLGLAVERVAIRPFAGSGRTVLLLTTIAAGLVLEQAAQLIWGPETKAFHTPFAD 138 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V +L + ++ L+L+R+ + A R +++ Sbjct: 139 VRVRV-----------GGGFLSSLDLVILAVGLTTALALWLFLKRSRLGWAVRATAQDRE 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + +FA++ A G++G + P M FS ++ + +LGG+ Sbjct: 188 AALQMGVDVNQVSRVSFAMAGALAGVSGLLVGLYYHSVYPTM-GFSASLKGFTAALLGGL 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L L + L+ + R + Sbjct: 247 GNIPGALVGAYLLGTAESLAVAWLGSTWRDLVGIGLLLGVLL-------------FRPNG 293 Query: 339 LLRLRTPSN 347 L Sbjct: 294 LFAAARALL 302 >gi|154249222|ref|YP_001410047.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1] gi|154153158|gb|ABS60390.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1] Length = 562 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 133/318 (41%), Gaps = 33/318 (10%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + ++L +I ++ + I+ + + GL+I++G G +S+ +IGAY+ Sbjct: 1 MIWIILAFIPFILLKSSFIITILSLVGIFSIASLGLNIIMGYSGQISIGHAAFMSIGAYT 60 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L Y + I + + +++ G+++G P+L+ G YLAIAT+ + + Sbjct: 61 STLLVMHYNVPIIFGVILGGLVAFFLGLLIGFPALRLSGFYLAIATMGFVVAVEQLFSTL 120 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T G AGI + + V Y ++L F++ I Sbjct: 121 EHVTGGHAGIRGIPFPHIWNSDVEK------------------YLIVLAFVFITYVISDR 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + W IR+N+ A + + K+ AFA+ S F G+AGA +A I+P Sbjct: 163 LINSKTGRGWMAIRENEIAASVVGINVARYKVLAFAIGSMFAGIAGALYAHVIGYIAPSD 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + ++ +++I ++GGM SL + I + + L + Sbjct: 223 FGIARSLDLLAISVIGGMASLDGPYYGSIIYVALPFLFSRTHLSMS-------------- 268 Query: 321 TTLMVIALFLVILMRSHS 338 + I L V+L Sbjct: 269 -IIFGIILIFVVLFMPFG 285 >gi|124266316|ref|YP_001020320.1| putative transport system permease [Methylibium petroleiphilum PM1] gi|124259091|gb|ABM94085.1| putative transport system permease protein [Methylibium petroleiphilum PM1] Length = 368 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 96/343 (27%), Positives = 155/343 (45%), Gaps = 17/343 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + V LLL L A + L+YV+ A GL+IVVG GLL L + Y Sbjct: 6 LVVFLVAGALLLLTPLIAQYFGNAWVRIIDIALLYVLLALGLNIVVGYAGLLDLGYIAFY 65 Query: 75 AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY + +L S + +W +IP++ ++G G+I+G P+LK R Sbjct: 66 AVGAYLFGLLASPHLADHFAAVRAMFPYGMHTPLWFVIPLALAVAGTAGVILGAPTLKLR 125 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + L N G ++ + L R + Sbjct: 126 GDYLAIVTLGFGEIIRVFLNNLDAPVNITNGPKGISQIDSIKFFGLDLGRTLDLGFISLP 185 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+ L M +S I L R+ I AW IR+++ A ++ KL AF + Sbjct: 186 SVTLYYYLFLSMVIVSVIICYRLERSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMG 245 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 ++F G+AG+ F A + ISP+ F E+I+V+++V+LGG+ + + +L + E+ Sbjct: 246 ASFGGVAGSMFGAFQGFISPESFSLQESIMVVAMVVLGGIGHIPGVIVGALLLAALPEVL 305 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L+ +A+ ++L R L Sbjct: 306 RYVAGP-LQEMSGGRLDSAILRQLLIALAMIAIMLARPRGLWP 347 >gi|158520852|ref|YP_001528722.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3] gi|158509678|gb|ABW66645.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3] Length = 335 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 127/315 (40%), Gaps = 17/315 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 Y + + + + GLS+++G G +SL IGAY L Sbjct: 16 IAATPLAVRNDYYLGLLVFAGLNCLACIGLSLLMGYAGQISLGHAAFIGIGAYVSGYLTV 75 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 R + IW + +++G+P+LK RG YLA+ATL EI + + IT G Sbjct: 76 RMDVGIWPAMVAGVGACMLMALVIGVPALKLRGHYLAMATLGFGEIVYIVAVAAIGITGG 135 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 GI +L+ ++S RF +Y M FL L L + + Sbjct: 136 PEGINSIPKLHLFNYVLKSDTRF--------------FYFTWAMVFLGLFFALNLIHSRV 181 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 + ++ A SL K+ F +S+ + G+AG +A + I P F + Sbjct: 182 GRGLMAVHGSEDAAGSLGVNTARYKIQVFVLSAVYAGLAGCLYAHYVNYIDPGPFGVMHS 241 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 ++++++V +GG+ + L + ++ ++ Y+ + +++ + T + Sbjct: 242 VLLVTMVAVGGIHHIWGAVGGALFLSLLPDMLSLLSEYFEGTGIQYR---SDYDTLVYGA 298 Query: 327 ALFLVILMRSHSLLR 341 L LV+L + Sbjct: 299 ILLLVMLFLPEGIAG 313 >gi|86749204|ref|YP_485700.1| inner-membrane translocator ABC transporter [Rhodopseudomonas palustris HaA2] gi|86572232|gb|ABD06789.1| inner-membrane translocator ABC transporter [Rhodopseudomonas palustris HaA2] Length = 832 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 16/286 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A V L L A +++ Y+ + + + + GL+++VG G +S+ V YAIGA Sbjct: 14 ATVLILTAIAALYAARAEGYLPFVLAMVALTCIVGVGLNVLVGLTGQISIGHVGFYAIGA 73 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL + WL +P++ +I+GA G+++ LP+L+ G YLA+ T+ + I Q++ I Sbjct: 74 YTVAILTLQGLS-FWLALPLAGVIAGAIGLLLSLPALRVSGPYLAMITIAFAFIVQHLTI 132 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W+ +T G G+ GT + + +G+ S + Sbjct: 133 EWRGLTGGSNGLMGLPPPTLAGTMFTERE---------------IALLAIGLAGASTYLF 177 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L +A A +RD + A S+ + K +AF +S+A G+AG FAA ++P Sbjct: 178 YRLAGSAWGKAMVAVRDAEIAARSIGLNPVSVKAAAFVLSAALAGIAGGIFAALIAFVAP 237 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 D F FS++I+ + I+GG + AI + + E+ + Y Sbjct: 238 DSFPFSQSILFLFACIVGGAGWVLGPVVGAAITVVLPEMLSQLAEY 283 >gi|218887695|ref|YP_002437016.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758649|gb|ACL09548.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 415 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 94/326 (28%), Positives = 156/326 (47%), Gaps = 26/326 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + LL + Y ++ I L+YVM GL+IVVG G L L V YA Sbjct: 89 AAVPALVVLLSAFLVLPWVVSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYA 148 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAYSY IL S +GL W ++P+ ++ G+++G P L+ RGDYLAI TL EI + Sbjct: 149 VGAYSYAILNSNFGLGFWSVLPIGGAMAALFGILLGFPVLRLRGDYLAIVTLGFGEIIRL 208 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L W + G +GI +R S ++YY++L ++ Sbjct: 209 VLENWSSFSQGPSGIANIERPG-----------LLGMQLSVSDATTYIYYLILAAVIVTI 257 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L+ + I AW+ +R+++ A ++ I KL+AFA+ + + G AG FAA Sbjct: 258 LAVTRLKNSRIGRAWQALREDEIACQAMGIDITTTKLTAFALGACWAGFAGVIFAAKTTF 317 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I+P F F E+ +V+++V+LGGM S+ ++ +LI + E + Y Sbjct: 318 INPASFTFLESAMVLAMVVLGGMGSVIGVSVGALVLILLPEYLRAFSEY----------- 366 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + L+++ R L+ Sbjct: 367 ----RMLIFGATMVLMMVFRPQGLVS 388 >gi|256830054|ref|YP_003158782.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256579230|gb|ACU90366.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 349 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 130/320 (40%), Gaps = 16/320 (5%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y+ S+ ILI V+ A L+++ G G +SL +GAY +L G+ Sbjct: 40 PQFLDSYVMSILNLILIAVIGAVSLNLLTGVCGQMSLGHGAFVGVGAYGAAVLS-NLGVP 98 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 +L + ++ GMI G+PSL+ +G YLAI+TL I + + + +T G G+ Sbjct: 99 FFLALLGGGAVAAMVGMIFGIPSLRLKGIYLAISTLAAQLILEYVFLHAGSLTGGANGLP 158 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 V + ++Y++L + L ++ + RT A+ Sbjct: 159 VNAPEIMGYSFDTDSK---------------IFYLILLVTVLCVLVVTNVIRTRPGRAFV 203 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IRD ++ ++ + KL AF +SS G+AG +A I+P+ F +I ++ Sbjct: 204 AIRDYHQSAENVGVNLFAFKLQAFGLSSFLAGIAGGLWAHYTMYITPEQFSMGLSISYLA 263 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 ++I+GGM S+ + + E+ + + + L L Sbjct: 264 MIIIGGMGSVLGSIFGAIFITLLPEMLNLLTTSLGGIAPDLSAIIVPMKEGVFGLMLVLF 323 Query: 332 ILMRSHSLLRLRTPSNFLER 351 ++ L R + + Sbjct: 324 LIFEPEGLARKWRLTKAYWK 343 >gi|94971893|ref|YP_593933.1| ABC transporter-related protein [Deinococcus geothermalis DSM 11300] gi|94553944|gb|ABF43859.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Deinococcus geothermalis DSM 11300] Length = 608 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 118/329 (35%), Gaps = 22/329 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ L + ++ + I I+ + A GL ++ G LGL S +GA Sbjct: 19 LLMGLAGAVTLLLPLILPLFQVTLLVNIAIFAIVAIGLVLLTGILGLTSFGQAAFMGLGA 78 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L ++ G S WL +P +++G ++GL +L+ +G YL +AT+ I Sbjct: 79 YTTAVLTTQAGWSPWLTLPAGLVVTGLIAWVLGLLTLRMQGHYLPLATIAWGMSLYYIFG 138 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + G GI + G ++ S F + LL Sbjct: 139 NTPAL-GGFTGITDIPPVRLFGWSLTSPRTFAYLALLALGLVALGAQFLL---------- 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + A R +R + ++ F +++ +AG +A S+ ++P Sbjct: 188 ----SSRVGRAMRALRSGPVVAEAFGVNAFRLRVQVFVLAALLAALAGWLYAHSQRFVNP 243 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F I + + ++GG + +A++ + E + + F Sbjct: 244 TPFSLQAGIEYLFMAVVGGSQYVWGAVLGSALITLLREWLQDLLPALIGAQGNF------ 297 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + + L + L L + Sbjct: 298 -EVIVFGVLIILTLQFARRGLWPLLERAL 325 >gi|297528836|ref|YP_003670111.1| inner-membrane translocator [Geobacillus sp. C56-T3] gi|297252088|gb|ADI25534.1| inner-membrane translocator [Geobacillus sp. C56-T3] Length = 354 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 66/323 (20%), Positives = 131/323 (40%), Gaps = 20/323 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + + Y+ S I I +Y + + G+++++G G +SL Y IGA Sbjct: 16 LLAGAAVWLGLPWLVFGNNYVLSTLILIGLYALVSTGMTMLMGYAGQISLGQAAFYGIGA 75 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ L + G WL + A+++ + +++G+P + R YLA+ATL I Sbjct: 76 YASAYLTAHAGWPSWLALAAGAVLAASVALVVGIPVFRLREHYLALATLGFGVIMFTFFK 135 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +WK IT G G + + R + ++ YY++ + Sbjct: 136 EWKGITGGLNGFFGIPPI--------------RIAGVPLQSDLQFYYLVSLFVLVGLWFA 181 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + R+ + A R I ++ A SL I+ KL F +S+ + +AG+ +A I+P Sbjct: 182 HNIVRSRVGRALRAIHGSEVAASSLGVNIMKYKLQIFMLSAVYASIAGSLYAHYVTFINP 241 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 D+F +I + +V++GG + A+ + + E + + Sbjct: 242 DLFGIVPSISFLIMVVIGGSAHVWGGLVGAAVYVCLGEWLKAVVPLLLPNAGG------E 295 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + L ++++ + L Sbjct: 296 FEIVFFGLLLVVMLIYMPNGLTG 318 >gi|138896619|ref|YP_001127072.1| branched chain amino acid ABC transporter permease [Geobacillus thermodenitrificans NG80-2] gi|134268132|gb|ABO68327.1| Branched-chain amino acid ABC transporter (permease) [Geobacillus thermodenitrificans NG80-2] Length = 356 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 125/315 (39%), Gaps = 20/315 (6%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 F Y+ S I I +Y + + G+++++G G +SL Y +GAY+ L + Sbjct: 26 LGFPWLVAGNNYLLSTLIIIGVYALVSTGMTLLMGYAGQISLGQAAFYGVGAYTSAYLTA 85 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 G WL + V A+++ ++G+P + R YLA+ATL I + +W+ IT G Sbjct: 86 HAGWPPWLAMAVGAVLAALVAFVVGIPVFRLREHYLALATLGFGVIMFTLFKEWEAITGG 145 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G + + + +I YY++ + R+ + Sbjct: 146 LNGFFGIPPIS--------------VLGMSLQTDIQFYYLVWLFVLAGLWFAHNIVRSRV 191 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A R I ++ A SL I KL F +S+ + +AG+ +A I+PD+F + Sbjct: 192 GRALRAIHGSEVAASSLGVNITKYKLQIFMLSAMYASVAGSLYAHYVTFINPDLFGIVPS 251 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I + +V++GG + A+ + + E + + Sbjct: 252 IYFLIMVVIGGTAGVWGGLVGAAVYVCLGEWLKAVVPILMPDAGG------EFEIVFFGL 305 Query: 327 ALFLVILMRSHSLLR 341 L ++++ L Sbjct: 306 LLIIMLIYMPSGLTG 320 >gi|329940866|ref|ZP_08290146.1| branched chain amino acid transport permease [Streptomyces griseoaurantiacus M045] gi|329300160|gb|EGG44058.1| branched chain amino acid transport permease [Streptomyces griseoaurantiacus M045] Length = 602 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 70/335 (20%), Positives = 136/335 (40%), Gaps = 29/335 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----- 85 T++ + ++G+ IL + A GL+IVVG GLL L V +G+Y+ ++ Sbjct: 260 PFTQNDDHNANLGVNILTFGTVALGLNIVVGLTGLLDLGYVAFLGVGSYTAALVSGSEYS 319 Query: 86 --SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + W ++ G+++G P+L+ RGDYLAI TL EIF+ + Sbjct: 320 RFTGTEFPFWAAALTGMAVTLVFGVLIGAPTLRLRGDYLAIVTLGFGEIFRIAVNNMDGS 379 Query: 144 TN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G R+ L +L + ++++L + + + Sbjct: 380 SGPNITNGPNGISRIPDLEIFGFNLGDSHDVAGHTLGRFANYFFLMLIVTAIVVLVFTRA 439 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + I +W +R+++ A ++ KL AFA+ ++ G+AG A ++P + Sbjct: 440 ADSRIGRSWIAVREDETAATAMGINGFRVKLVAFALGASLAGLAGTVGAHVSYSVNPAPY 499 Query: 262 KFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +F+ + +++ V+LGGM ++S ++L + E + Y Sbjct: 500 QFAGAAPPNSAFLLAAVVLGGMGTVSGPLLGASLLYLIPEKLGFLQNY------------ 547 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 IAL L++ R ++ R Sbjct: 548 ---ELFAFGIALVLLMRFRPEGVIANRRRQLEFHE 579 >gi|158421822|ref|YP_001523114.1| branched chain amino acid ABC transporter [Azorhizobium caulinodans ORS 571] gi|158328711|dbj|BAF86196.1| ABC branched chain amino acid family transporter [Azorhizobium caulinodans ORS 571] Length = 392 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 70/327 (21%), Positives = 137/327 (41%), Gaps = 19/327 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L ++ ++ F A + Y + + ++Y + A L+ +GS + + +Y I Sbjct: 79 LAMLLGIAIVLAFPFALEGNTYALHLCVISMLYAVLALALNFQLGSANIPNFATGASYGI 138 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L +G+S WL +P +A+++ G ++G+PS++ R YLA+ T+ + + Sbjct: 139 GAYASALLALNFGVSFWLALPAAAIVATVFGFLLGIPSMRTRDSYLALVTIAFGVVVNQL 198 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L T G G+ G + S + + YY+ + +S Sbjct: 199 LNNL-DFTGGPNGLVGIPVPELFGHSFASPLVILGAELPP---QANFYYLSALLVLVSIL 254 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L + + AW +R ++ A + + K+ AFAV + G AG +A I Sbjct: 255 FAERLHDSRVGLAWNALRADELAARCQGINVTWYKVLAFAVDAFLAGFAGTIYAFYVGFI 314 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SPD F F ++ ++++VI GGM ++ + +L + E + Y Sbjct: 315 SPDNFTFLVSVTIMTMVIAGGMDNILGVIVGAFLLTLLPEKLRAFSDY------------ 362 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343 + + +++R L R Sbjct: 363 ---RILFFGVTVIAFLMIRPQGLFPQR 386 >gi|283853484|ref|ZP_06370726.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] gi|283571109|gb|EFC19127.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] Length = 323 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 73/311 (23%), Positives = 120/311 (38%), Gaps = 29/311 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 +Y S+ I + + A GL++++G G +SL Y IGAY I +R GL Sbjct: 24 PYALPNEYYLSICILGCLSAVIAVGLNLLMGYAGQISLGHAAFYGIGAYVTAIATTRLGL 83 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I + + + ++ I+ P+LK +G YLA+ATL I + + T G +G Sbjct: 84 PIPVGMGLGVGLAALVAWIVAAPTLKLKGHYLAMATLGFGIIVSIVFNEAVDWTGGPSGY 143 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 RL G + S Y ++ + L L L ++ A Sbjct: 144 VGIPRLALFGYSFDSDH--------------SYYNLMAVVLALVVLGALNLMKSRTGRAL 189 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + ++KA SL I K F +S+A G+AG +A I+P F F+ ++ ++ Sbjct: 190 RALHVSEKAAASLGVDISAHKRFVFVLSAALAGLAGVLYAHYLSFIAPASFGFTFSVQLV 249 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +V+LGGM S+ L + E + L Sbjct: 250 VMVVLGGMASVWGSVAGAFFLTILPEALREFED---------------IDILVYGAILVA 294 Query: 331 VILMRSHSLLR 341 I+ L Sbjct: 295 TIMFLPDGLAG 305 >gi|218777929|ref|YP_002429247.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218759313|gb|ACL01779.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 357 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 79/339 (23%), Positives = 145/339 (42%), Gaps = 20/339 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + K L++ +Y+ S I IY + GL ++ G G +S+ Sbjct: 14 RLFKYRSTFFWYLALVVGCLFLPKILDEYMLSQLTFICIYAVAGVGLMLLTGFTGQISMG 73 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 AIG+Y+ +L ++ L +P S + + G+++G P L G YLAIAT+ Sbjct: 74 HAAFLAIGSYTSAVLTAKGVP-FLLALPASGVTAALVGIVIGRPILHLTGLYLAIATMGA 132 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + I + IL++W+ +TNG G+ V EI +Y+ L Sbjct: 133 AFIIEEILVRWESVTNGNMGMMVDAP---------------TIFGFGFDTEIRFFYLSLA 177 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + R+ A+ IRD++ A ++ + K +FA+S+ F G+AG+ + Sbjct: 178 VLIIVLLLAKNILRSPTGRAFIAIRDSEIAAEAMGINLASFKTQSFAISAFFTGIAGSLY 237 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A I+P+ + ++I +++IVI+GG+ SL + I + +L Y L Sbjct: 238 AHKIFFINPESYTIMQSIELLAIVIIGGLGSLHGAVYGSIFFIFLPQLIIISKDY----L 293 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 F L + + LV+L + + F Sbjct: 294 PTFVQDQTGLQPALFGLLIILVMLFEPMGIYGRWLKTKF 332 >gi|160901980|ref|YP_001567561.1| inner-membrane translocator [Petrotoga mobilis SJ95] gi|160359624|gb|ABX31238.1| inner-membrane translocator [Petrotoga mobilis SJ95] Length = 571 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 139/321 (43%), Gaps = 36/321 (11%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ ++ L S+ ++ + I+I+ + A GL+++ G G +S+ AIGA Sbjct: 4 ALYTLIIGSLLGLLFISKSFLLLVFSNIIIFAIAALGLNVIFGYTGQISIGHAAFMAIGA 63 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ + I++ + + S GM++ LP+++ +G YLAIAT+ Q I+ Sbjct: 64 YTSAFFTMSLNMPIFVNLIFVILFSALFGMLIALPAMRLKGFYLAIATMAFGIAVQEIIA 123 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + G+ G+ +F + + Y + L L I Sbjct: 124 SME-VFGGRTGMRNIP--------------------AFFDSDFYTYLLNLFFYSLLVYIT 162 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + ++ + +RD++ A + I AKL AF +SS + G+AG +A + ISP Sbjct: 163 SLIVKSPAGKRFNMVRDSELAARAFGVKIAKAKLQAFIISSIYSGIAGFLYAHTLGYISP 222 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F + ++ ++++VI+GG+ SL+ + I+ G+ L NF Sbjct: 223 ADFGLNVSLNLLAMVIVGGVASLNGGLIGSVIITGMPFLFSRSNFPM------------- 269 Query: 319 RHTTLMVIALFLVILMRSHSL 339 T ++ L + +L L Sbjct: 270 --TIIVGSLLIIFVLFFPRGL 288 >gi|148256991|ref|YP_001241576.1| putative high-affinity branched-chain amino acid transport system permease [Bradyrhizobium sp. BTAi1] gi|146409164|gb|ABQ37670.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 357 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 148/343 (43%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF + ++ I ++ + + L+F +Y S+ IQI I+ + A GL+I+VG Sbjct: 21 TIFPTKTSRNFAIAGVILLCFAPLVF--------SEYWLSVSIQIGIFAIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +S+ + +GA++ + + Y + ++ IP++ +I+ G++ GLP+ + +G Y Sbjct: 73 FTGQISIGQAGFFLLGAFTSAYINNTYAIPVFFAIPLAGVITALVGLVFGLPAARLKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L IATL I + + + + G F T Sbjct: 133 LVIATLAAQYILLDFFSRAEWFSGGSVPASANPFSIFGYTLRGDRQY------------- 179 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +YV+L + ++ L RT A IRD+ + + + + +F +++ F Sbjct: 180 --FYVVLAYVLVCYLLVTNLMRTRDGRALIAIRDHYLSAEIMGINLTKYRTLSFGLAAFF 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA +A + IS + F +I+ ++++I+GG S+ TA ++ + E + Sbjct: 238 AGIAGALYAHYQLVISQEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPESMEWL 297 Query: 302 N----FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + L + + + + + ++ L Sbjct: 298 SHNLKGSSIDKALALNNNITFLREIAIGLIIIAFLMFEPDGLA 340 >gi|148378458|ref|YP_001252999.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] gi|153931583|ref|YP_001382847.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A str. ATCC 19397] gi|153936686|ref|YP_001386414.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A str. Hall] gi|148287942|emb|CAL82008.1| branched-chain amino acid transport system,permease protein [Clostridium botulinum A str. ATCC 3502] gi|152927627|gb|ABS33127.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A str. ATCC 19397] gi|152932600|gb|ABS38099.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A str. Hall] Length = 314 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 29/331 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L + L + +YI + I IL+Y + + L+ V G+ G +S+ Y IG Sbjct: 9 IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL L + + +++G CG+ +G+PSL+ +G+YL I TL EI + IL Sbjct: 69 AYTTSILMISAHLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W +T G GI FL + YY++L + +S I Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVSFVI 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + +R+N+ A SL I KL +F +SS G+AG F+A IS Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+I ++++VI+GG ++ +L + EL N Y Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY------------- 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L L+I+ R + L+ F Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310 >gi|313109908|ref|ZP_07795837.1| putative permease of ABC branched-chain amino acid transporter [Pseudomonas aeruginosa 39016] gi|310882339|gb|EFQ40933.1| putative permease of ABC branched-chain amino acid transporter [Pseudomonas aeruginosa 39016] Length = 425 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V +L+ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 98 IVPLILVAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 158 GLALGYQYLGLGFWTVLPLAALTAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ + R + F + + +F+Y VL + Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R + AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 278 LVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ I + ++++ R L+R Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411 >gi|86750682|ref|YP_487178.1| branched-chain amino acid transport system ATP-binding protein [Rhodopseudomonas palustris HaA2] gi|86573710|gb|ABD08267.1| branched-chain amino acid transport system ATP-binding protein [Rhodopseudomonas palustris HaA2] Length = 589 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 69/334 (20%), Positives = 128/334 (38%), Gaps = 27/334 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + ++ IL AV+ L L + + + I + + A GL ++ G GL S Sbjct: 1 MPRWLPILLFAAVMTALPLIPGMPP-----FWIVLLDNIGLAALVAMGLVLLTGVGGLTS 55 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 GAY+ L + YG+S WL +P+S +++G +++GL +++ G YL + T+ Sbjct: 56 FGQAAFCGFGAYTTAYLATVYGVSPWLTLPLSLLVAGTAAVLLGLMTVRLSGHYLPLGTI 115 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + K + GI L + +Y+V+ Sbjct: 116 AWGISLYYLFSKLDFL-GRNDGISQVPPLSIGSLQMFDPET--------------IYFVI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 GM +SA + + L + A R +R A + AKL F ++ G++G Sbjct: 161 WGMVLISAVLTMNLLDSRTGRAIRALRRGHIAAEAFGVQTARAKLLVFIYAAVLAGLSGW 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + ++P F I + I ++GG + AI+I + E+ G F Sbjct: 221 LYAHFQRNVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIILKEVLQGYLPMLFG 280 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + I L L++ + + Sbjct: 281 GQ-------GQLEIIVFGILLVLLLQLAPGGVWP 307 >gi|148254676|ref|YP_001239261.1| branched chain amino acid ABC transporter permease/ATP-binding protein [Bradyrhizobium sp. BTAi1] gi|146406849|gb|ABQ35355.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 589 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 115/327 (35%), Gaps = 21/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + +L L + ++ I +Y + A GL+++ G G++S Sbjct: 4 LHVQLAAMVAMLCLAAAPFLLPPFTITLMNYIGVYSLVAIGLALLTGVGGIVSFGQAAFV 63 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 I AY+ + + G S W+ + ++ ++ + ++GL +L+ +G +L+++T+ Sbjct: 64 GIAAYATAWVSALNGQSPWVGLLLALTLTCSIATLLGLATLRLQGHFLSLSTVAWGLAIG 123 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + GI + F ++ +Y+++ G+ Sbjct: 124 FLFGNVEGL-GRFNGIASIPPISFGSY--------------ALVSSAQVYFLIWGIVAAV 168 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I L + + A R +R SL + KL F +++ ++G +A Sbjct: 169 LWIGYNLLDSRLGRAMRALRGGNTLVESLGISAFRIKLLIFVIAAFLAALSGWLYAHMSR 228 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISP F I + + ++GG SL AI+ + Sbjct: 229 FISPGPFDAGMGIEYLMMSMVGGAGSLLGGVVGAAIVTLLKNSVQDYLPLIAKG------ 282 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + ++ Sbjct: 283 ASGQLEIVAFSALFILFLQWARQGIVP 309 >gi|254425744|ref|ZP_05039461.1| ABC transporter, ATP-binding protein [Synechococcus sp. PCC 7335] gi|196188167|gb|EDX83132.1| ABC transporter, ATP-binding protein [Synechococcus sp. PCC 7335] Length = 832 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 15/288 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ + L + Y + I + + + GL+++ G G +S+ +AI Sbjct: 8 LMVGLTIFALAIAAALGAPNTYYLFVLGMIAVTTIVSVGLNVLAGLSGQISIGHAGFFAI 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L R + + + A+ + G+ + P+L+ G YLA+ T+ I + + Sbjct: 68 GAYAGSLLMLRADWHLGAALLLGAITAAGTGVALSGPALQVSGPYLAMVTIAFGIIIERV 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 LI+W +T G G+ + +++ + FLS Sbjct: 128 LIEWVSLTGGFGGLSGIPKPT---------------LLGLQPALRESVLLVIVLAFLSVV 172 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L+R A++ +RD+ A ++ ++ K+ FAVS+A G+AG FFA + Sbjct: 173 SFALLKRHPWGKAFQAVRDDAIAAAAVGLNPLYVKVMGFAVSAALTGLAGVFFAIIVGFV 232 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 SPD F F +I+ + +ILGG+ + IL+ + E Y Sbjct: 233 SPDSFTFHRSILFLLAIILGGLGTAEGAFIGALILVILPEFLHDFVDY 280 >gi|331002580|ref|ZP_08326096.1| hypothetical protein HMPREF0491_00958 [Lachnospiraceae oral taxon 107 str. F0167] gi|330408308|gb|EGG87784.1| hypothetical protein HMPREF0491_00958 [Lachnospiraceae oral taxon 107 str. F0167] Length = 344 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 28/337 (8%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + K + ++ L+LF+ L S +Y ++ I+I +YV A GL+I+ G GL+ Sbjct: 13 KFQKITYTYRIYLLLITLILFVILPFVFSNQYFLTIIIKIGVYVCLAMGLNILTGYTGLV 72 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 SL AIGAY+ IL R+G + + V +++G GMI+GLPSL+ G YL+I T Sbjct: 73 SLGHAGFVAIGAYASSILVVRHGFNFFAASLVGMIVAGVIGMILGLPSLRVSGTYLSIIT 132 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + + + +TNG GI + F + + +YY+ Sbjct: 133 LGFGEIIKMTAMNFTALTNGTLGIKNIPKPGI-------------FGFTLNVTNYGLYYM 179 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L L + L ++ A + I+ ++ A + I + K+ AF VS+ G Sbjct: 180 MLITVILISLFCYLLVKSKTGRALQAIKTDELAATMMGININYYKIIAFVVSAMICAFGG 239 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + ++ I P+ F F + +++SIVILGGM +L + ILI E+ + Y Sbjct: 240 SLYSVLIGYIDPNTFNFDVSTLILSIVILGGMGTLRGMFVGAIILIAFPEVSRFLMEY-- 297 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 L I L L++ R +L + Sbjct: 298 -------------RFVLYGIILVLMMRFRPQGILGYK 321 >gi|15600104|ref|NP_253598.1| permease of ABC branched-chain amino acid transporter [Pseudomonas aeruginosa PAO1] gi|107104010|ref|ZP_01367928.1| hypothetical protein PaerPA_01005083 [Pseudomonas aeruginosa PACS2] gi|116053060|ref|YP_793379.1| putative permease of ABC branched-chain amino acid transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|254244196|ref|ZP_04937518.1| hypothetical protein PA2G_05041 [Pseudomonas aeruginosa 2192] gi|296391748|ref|ZP_06881223.1| putative permease of ABC branched-chain amino acid transporter [Pseudomonas aeruginosa PAb1] gi|9951188|gb|AAG08296.1|AE004904_4 probable permease of ABC branched-chain amino acid transporter [Pseudomonas aeruginosa PAO1] gi|115588281|gb|ABJ14296.1| putative permease of ABC branched-chain amino acid transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126197574|gb|EAZ61637.1| hypothetical protein PA2G_05041 [Pseudomonas aeruginosa 2192] Length = 425 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V +L+ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 98 IVPLILVAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 158 GLALGYQYLGLGFWTVLPLAALTAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ + R + F + + +F+Y VL + Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R + AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 278 LVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ I + ++++ R L+R Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411 >gi|254238371|ref|ZP_04931694.1| hypothetical protein PACG_04509 [Pseudomonas aeruginosa C3719] gi|126170302|gb|EAZ55813.1| hypothetical protein PACG_04509 [Pseudomonas aeruginosa C3719] Length = 425 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V +L+ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 98 IVPLILVAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 158 GLALGYQYLGLGFWTVLPLAALTAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ + R + F + + +F+Y VL + Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R + AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 278 LVLYIKYRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ I + ++++ R L+R Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411 >gi|260907107|ref|ZP_05915429.1| inner-membrane translocator [Brevibacterium linens BL2] Length = 353 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 140/319 (43%), Gaps = 12/319 (3%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + + + Y S+ LI + A GL+++VG G +SL A+GA++ Sbjct: 29 IGAVAVIAIIVPFVFDNYWLSLANTALIASIGAIGLNVLVGYTGQISLGQGGFLAVGAFT 88 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 IL R G+ L I ++ + + G++ GLP+L+ +G YLAIATL + I+ +W Sbjct: 89 SAILTDRMGVPAPLSILMAVVTTAVIGVLFGLPALRLKGLYLAIATLASQVVILFIVRRW 148 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G+ S + F F +E Y +L+ + L A Sbjct: 149 NFLTEGQG------------FVDVSRLEVFGFKIERSTFEQQWYIILIIVTILVAITATN 196 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L RT I A+ +RD A ++ + KL+AFAVS+A++G+AGA A + IS + Sbjct: 197 LFRTNIGRAFMAVRDQDIAASAMGVNLTRTKLTAFAVSNAYVGLAGALLAHYSEIISWEK 256 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F +I+ ++++I+GG+ S++ + + + + Sbjct: 257 FTMDVSILYLAMIIVGGLGSIAGSIYGAMFMTFLPIAVRMFGEVIGGVVPQVQKQLPAVE 316 Query: 321 TTLMVIALFLVILMRSHSL 339 + + + ++ L Sbjct: 317 HAAFGLVIIIFLIFEPRGL 335 >gi|134095638|ref|YP_001100713.1| high-affinity branched-chain amino acid ABC transporter membrane protein [Herminiimonas arsenicoxydans] gi|133739541|emb|CAL62592.1| Putative high-affinity branched-chain amino acid transport system permease protein BraE/LivM [Herminiimonas arsenicoxydans] Length = 404 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 97/379 (25%), Positives = 172/379 (45%), Gaps = 40/379 (10%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + F ++ N LLA++ L+F F+ ++ + L+Y+M A GL+IVVG Sbjct: 3 NYFDVKNNPRKAWSGLLAILALALIFPFIAQHFGNSWV-RIMDMALLYIMLALGLNIVVG 61 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRY--------------------------------G 89 GLL L + YAIGAY +L S Sbjct: 62 FAGLLDLGYIAFYAIGAYLTALLASPQFAVVLESFVNQYPPIGAALMWVFGSEIAQNGIH 121 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 LS+W+++P++ +++G G ++G P+LK RGDYLAI TL EI + + N G Sbjct: 122 LSLWVIVPLAVLVAGFFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNGPVNITNG 181 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF------MYYVLLGMCFLSASIILWLRR 203 + + + SL S+ ++ Y++ L +C I + L+ Sbjct: 182 PQGINMIDPIRIFGVSLNGDEGSASTVMLGNYAMPSVNAYYFLFLVLCIAIIFISVRLQN 241 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 + + A+ IR+++ A ++ KL AFA+ ++F G+AGA FA+ + +SP+ F Sbjct: 242 SRLGRAFVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGAMFASFQGFVSPESFSL 301 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTT 322 +E+I V+++V+LGGM + + +L + E+ + +L + Sbjct: 302 TESIAVLAMVVLGGMGHIPGVVLGGILLAALPEVLRHVVEPLQRTLFGEVLIDAEILRQL 361 Query: 323 LMVIALFLVILMRSHSLLR 341 L +A+ L++L+R L Sbjct: 362 LYGLAMVLIMLIRPAGLWP 380 >gi|168177801|ref|ZP_02612465.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum NCTC 2916] gi|226947691|ref|YP_002802782.1| putative high-affinity branched-chain amino acid ABC transporter permease [Clostridium botulinum A2 str. Kyoto] gi|182671229|gb|EDT83203.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum NCTC 2916] gi|226842666|gb|ACO85332.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A2 str. Kyoto] Length = 314 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 29/331 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L + L + +YI + I IL+Y + + L+ V G+ G +S+ Y IG Sbjct: 9 IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL L + + +++G CG+ +G+PSL+ +G+YL I TL EI + IL Sbjct: 69 AYTTSILMINAHLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W +T G GI FL + YY++L + + I Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVFFVI 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + +R+N+ A SL I KL +F +SS G+AG F+A IS Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+I ++++VI+GG ++ +L + EL N Y Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY------------- 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L L+I+ R + L+ F Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310 >gi|332526027|ref|ZP_08402165.1| putative transport system permease [Rubrivivax benzoatilyticus JA2] gi|332109870|gb|EGJ10498.1| putative transport system permease [Rubrivivax benzoatilyticus JA2] Length = 363 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 79/301 (26%), Positives = 139/301 (46%), Gaps = 17/301 (5%) Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSA 100 +IVVG GLL L V YA+GAY Y +L S + IWL+IP++A Sbjct: 47 NIVVGYAGLLDLGYVAFYAVGAYMYALLASPHLMENFEWIANAFPNGLHTPIWLVIPLAA 106 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++ G+++G P LK RGDYLAI TL EI + + + N G DR+ + Sbjct: 107 GLAALAGVLLGTPVLKLRGDYLAIVTLGFGEIIRVFMNNLEYPVNITNGPRGLDRIDPMN 166 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + + YY+ L + S I L R+ I AW IR+++ A Sbjct: 167 IFGFEFGKAVTIGDFTMPAVTLYYYLFLALVIFSVLISYRLERSRIGRAWMAIREDEIAA 226 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ KL AF + + F G++G+ FA+ + +SP+ F E+++++++++LGG+ Sbjct: 227 KAMGINTRNMKLLAFGMGATFGGVSGSMFASFQGFVSPESFSLQESVMIVAMIVLGGLGH 286 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + +L + E+ + + + L+ +A+ ++L+R L Sbjct: 287 IPGVILGAVLLAALPEVLRYVAGP-LQEMTGGRLDAAILRQLLIALAMISIMLLRPRGLW 345 Query: 341 R 341 Sbjct: 346 P 346 >gi|257126944|ref|YP_003165058.1| inner-membrane translocator [Leptotrichia buccalis C-1013-b] gi|257050883|gb|ACV40067.1| inner-membrane translocator [Leptotrichia buccalis C-1013-b] Length = 369 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 133/344 (38%), Gaps = 48/344 (13%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + + ++L + Y + I ILI+++F+ L+I VG +G L+L Sbjct: 45 KNYVVTFISIIALYIVLSFTFDPNDAFSYTKGIYINILIFILFSVSLNITVGLMGQLNLG 104 Query: 70 CVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 AIG YS + + + L+ +++ G ++G +L+ RGDYL Sbjct: 105 QAGFIAIGGYSAAFISKILVNYNLPPIIQLILVSLFGGLVAAIFGFLVGGSTLRLRGDYL 164 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + I+ + + L F T +I + Sbjct: 165 AIITLAFGEIVKYIIQNLDFLGGATGLNNIPTILDFSNTYFIVVISIVIITMAMT----- 219 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 + +IR+++ A ++ + KL FA S+ F Sbjct: 220 ---------------------SRKGKEILSIREDEIAAENIGIGLNRVKLYGFAFSAFFA 258 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+ G+ FA + ++PD F F +I ++ +V+LGG+ S++ A IL + E + Sbjct: 259 GVGGSLFAHNIGILTPDKFGFLFSIEILVMVVLGGLGSITGAIVAATILTLLNERLRDV- 317 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + I L +++ R + + + Sbjct: 318 --------------SQFRYLIYAIILISLMIFRPKGIFGTKEFT 347 >gi|317401333|gb|EFV81970.1| ABC transporter like protein [Achromobacter xylosoxidans C54] Length = 640 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 141/312 (45%), Gaps = 16/312 (5%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 K L LL + + + + Y + I+IY + +GL IVVG G +SL Sbjct: 1 MKPLHLLLSIVAVACLAAVPLGVTNTYYLHLIETIMIYSILLFGLDIVVGYTGQVSLGHA 60 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + IG+Y +L + IW+++P + +I+ A G ++ LP+L+ G YLA+ TL Sbjct: 61 GLFGIGSYVAGVLFFHLQMPIWVILPAAILIAAAFGAVLALPALRVTGPYLAMVTLAFGT 120 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I Q ++ + +T G GI + ++ + ++++ + Sbjct: 121 IIQILINEMTFLTEGPLGIKIPKPS----------------IGGHILTKSEYFWLVAALL 164 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 LS ++ + ++ + ++ +RD+ A + ++ K+ AF +S+ F G+AGA ++ Sbjct: 165 VLSLIVVHRILKSHLGRSFEALRDSPIASDCMGVSVYRHKVFAFVISAGFAGLAGALYSY 224 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 S ISP+ + F I+ + +I+GG S + +I++ + ++ + + +L Sbjct: 225 SEQYISPNTYNFELTILFLLAIIMGGRKSRTGALLGASIIVLLPKMLDDIATFRLIALGV 284 Query: 312 FDCSFNMRHTTL 323 + Sbjct: 285 AILVTVGSAIAI 296 >gi|51891844|ref|YP_074535.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51855533|dbj|BAD39691.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 355 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 74/329 (22%), Positives = 137/329 (41%), Gaps = 16/329 (4%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +A + L+ L+ Y S+ + IY + A GL+++ G G +S+ Sbjct: 27 LAVARGWVLVALLYAIPWFLPNYYVSILNMVAIYTIAALGLNLLTGVTGQISVGHGAFTG 86 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GA++ L + W+ +P++ + + A G + GLPS + +G YLAIA+L I Sbjct: 87 MGAFTVGYLMKQGLP-FWVAMPLAGLTAAAVGALFGLPSARLKGLYLAIASLAAQVILTF 145 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + T G + V +F T + E +Y+ L + L Sbjct: 146 FFTRADWFTGGIHSMSVRRPSFFGHT---------------LSGERSYFYLALTVALLLG 190 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 L RT I A+ +RD A + + K++AFA+S+ + G+AGA +A Sbjct: 191 VFAQNLLRTRIGRAFMAVRDRDLAAEVMGIDLFRTKVTAFALSAFYAGIAGAIWAPYVMI 250 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ISP+ F+ +I +++++I+GGM S+ A + + + + Sbjct: 251 ISPEQFEIHLSIELLAMIIIGGMGSVMGSVYGAAFMTVMPIVVRELAMLLEPVFPSVGTK 310 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + A+ L ++ L +L Sbjct: 311 LLLIRDAAFGAAIVLFLIFEPEGLAKLWR 339 >gi|152989725|ref|YP_001350957.1| branched chain amino acid ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150964883|gb|ABR86908.1| probable permease of ABC branched-chain amino acid transporter [Pseudomonas aeruginosa PA7] Length = 425 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V +L+ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 98 IVPLILVAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 158 GLALGYQYLGLGFWSVLPLAALGAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ + R + F + + +F+Y VL + Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R + AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 278 LVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ I + ++++ R L+R Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411 >gi|294341017|emb|CAZ89412.1| putative High-affinity branched-chain amino acid transport system permease protein livM (LIV-I protein M) [Thiomonas sp. 3As] Length = 373 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 87/346 (25%), Positives = 155/346 (44%), Gaps = 19/346 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L+ L + + + ++Y+M A GL+IVVG GLL L + Y Sbjct: 7 WVWIVAGAAALIALPMVLQIAGDAWVRIAAFAMLYIMLALGLNIVVGLAGLLDLGYIAFY 66 Query: 75 AIGAYSYVILGSR----------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY Y +L S + +SIWL++P++A ++ + G+ +G P LK R Sbjct: 67 AVGAYLYALLSSNQLTSNFDALGAMFPNGFDVSIWLVVPMAAALAASAGIALGTPVLKLR 126 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + + N G ++ + L + S + Sbjct: 127 GDYLAIVTLGFGEIIRIFMNNLNAPINITNGPQGISGIHGIHLFGWDLNQNINIGSFTIP 186 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+ L + + L+ + I AW +R+++ A ++ KL AF++ Sbjct: 187 SVAQYYYLFLVLVVFVVILSYRLQDSRIGRAWMAMREDEIAAKAMGINTRNMKLLAFSMG 246 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + F G+AG F+A + +SP+ F E+IIV+++V++GGM + + +L + E Sbjct: 247 ATFGGVAGVMFSAFQGFVSPESFSLLESIIVLAMVVIGGMGHIPGVILGAVLLSVLPEAL 306 Query: 299 CGMNFYYFNSLLKFD---CSFNMRHTTLMVIALFLVILMRSHSLLR 341 M F F + + +A+ +++++R L Sbjct: 307 RYMGFISDWQQHTFGHVYMDSGILRQLIYALAMIIIMILRPKGLWP 352 >gi|218779554|ref|YP_002430872.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218760938|gb|ACL03404.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 330 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 122/322 (37%), Gaps = 29/322 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA + G + I I+ + A GL++++G G +SL Y IG Sbjct: 17 LAFFVFAGVIFLAGLFLDNYFYQQQLTFIGIFTLLAVGLNMLMGYAGQISLGHAAFYGIG 76 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ L G S W +P + SG I+G P+LK G YL + TL I + Sbjct: 77 AYTTGALTVHLGWSPWASLPCALAASGIIAYIVGKPTLKLSGYYLGMGTLGFGMIMHVLF 136 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W IT G G+ L + +V+ G ++ I Sbjct: 137 REWGSITGGPNGLVGIPSLS--------------LWGIDLSTGRNYLWVVWGCVLITFFI 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L + + A R I +++A ++ AKL F S+ +AG +A IS Sbjct: 183 CDRLVNSRVGRALRAIHFSEQAASAVGVDTAKAKLQVFVFSAMVAALAGFLYAHLVMFIS 242 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F F ++ ++++V++GGM S+ + +L + E + Y Sbjct: 243 PGSFGFLVSVKLVAMVVIGGMASIWGALLGSTLLTMLPEWLHAFSDY------------- 289 Query: 318 MRHTTLMVIALFLVILMRSHSL 339 + L V++ L Sbjct: 290 --EMVIYGGILMGVMIFLPQGL 309 >gi|170757305|ref|YP_001780110.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum B1 str. Okra] gi|169122517|gb|ACA46353.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum B1 str. Okra] Length = 314 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 29/331 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L + L + +YI + I IL+Y + + L+ V G+ G +S+ Y IG Sbjct: 9 IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL L + + +++G CG+ +G+PSL+ +G+YL I TL EI + IL Sbjct: 69 AYTTSILMISADLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W +T G GI FL + YY++L + + I Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVFFVI 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + +R+N+ A SL I KL +F +SS G+AG F+A IS Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+I ++++VI+GG ++ +L + EL N Y Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY------------- 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L L+I+ R + L+ F Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310 >gi|323706038|ref|ZP_08117608.1| inner-membrane translocator [Thermoanaerobacterium xylanolyticum LX-11] gi|323534652|gb|EGB24433.1| inner-membrane translocator [Thermoanaerobacterium xylanolyticum LX-11] Length = 321 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 73/339 (21%), Positives = 140/339 (41%), Gaps = 41/339 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K ++ L + + ++ + L Y + + + I V+ A L+++ G G SL Sbjct: 9 KNRLLIFLGLLAFYGIIQILLSTNILNDYYEINIVLMGINVILAVSLNLINGFTGQFSLG 68 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 +IGAY+ I+ + GL L + V + +G G+++G+PSL+ +GDYLAI TL Sbjct: 69 HAGFMSIGAYTSAIITYKLGLPFPLALLVGGIAAGIAGILIGIPSLRLKGDYLAITTLGF 128 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 EI + I + + + G +G+ + + Sbjct: 129 GEIIRVIFLNTEYV-GGASGLSGIPKYTNWT-------------------------WVFW 162 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ +I ++ IR+++ A S+ F K AF + + F G+ GA + Sbjct: 163 IAVITVVLIRNFINSSYGRCCVAIREDETAAESMGINTTFYKTLAFTIGAFFAGIGGALY 222 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + I P+ F F ++ ++++V+LGG+ S++ + L V L Sbjct: 223 AHNFYIIQPETFNFMKSFDILTMVVLGGLGSITGSILSAIFLTFVYALLQDY-------- 274 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L +V+L R L+ R S Sbjct: 275 -------AALRMVIYALLLIIVMLFRPEGLMGTREFSLK 306 >gi|152966899|ref|YP_001362683.1| inner-membrane translocator [Kineococcus radiotolerans SRS30216] gi|151361416|gb|ABS04419.1| inner-membrane translocator [Kineococcus radiotolerans SRS30216] Length = 386 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 30/349 (8%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKY-IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 + LLA+ + +L L L + S+ + Y + A GL+IV+G GLL L V Sbjct: 33 VWVLLALFFFVLPLLNLPIVSTPDAEFGSVLASVANYALVALGLNIVLGYAGLLDLGYVG 92 Query: 73 AYAIGAYSYVIL-GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 YAIGAY+ + ++ ++LI ++ IS A G+++G P+L+ RGDYLAI TL E Sbjct: 93 FYAIGAYTVGVGGSLHGEINWFVLIIMAVTISTASGLLLGAPTLRVRGDYLAIVTLGFGE 152 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF-------------FRFPSSFVI 178 I + + + + + + + SL+ F ++ Sbjct: 153 IIRLTALNTEWLNQARGITGIPRPPSTELFGLPSLVWDGATAKVDLGEGARSIFLKFGLL 212 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + Y++ L + L L+ + + AW R++++A KL AFA+ Sbjct: 213 DAVPYYWLALIVIILVLIADKLLQASRVGRAWEATREDEEAAELNGVPTFRFKLLAFAMG 272 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + G++GA +A+ I+PD F +++ ++ V++GG + ++ + E Sbjct: 273 AFVGGLSGALYASRIGAINPDSFMIQLSMMFLAAVVIGGQGNRWGAIVGGVVVAYLPERF 332 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + + L L+ R LL R Sbjct: 333 REFADF---------------RIVVFGLLLLLLANFRPQGLLPPRRAKR 366 >gi|209518173|ref|ZP_03267001.1| ABC transporter related [Burkholderia sp. H160] gi|209501380|gb|EEA01408.1| ABC transporter related [Burkholderia sp. H160] Length = 646 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 134/294 (45%), Gaps = 16/294 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 Y + I+IY + +GL IVVG G +SL + +GAY+ +L + G Sbjct: 19 FPVLSGNPYYIHLVETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGVGAYTAGVLFMKLG 78 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L I++ P++ +++ G I+ LP+L+ G YLA+ TL I Q ++ + +TNG G Sbjct: 79 LPIFVTAPLAILVTAGFGAILALPALRVSGPYLAMVTLAFGTILQILINEMDFLTNGPMG 138 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + E+ Y+++ + S ++ + R+ + A Sbjct: 139 VKIPKPSLGARPM----------------NEVEYYWLVAALLVASLIVVHRVLRSHLGRA 182 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + +RD+ A + ++ K+ AF +S+ F G+AG ++ S ISP+ + F I+ Sbjct: 183 FEALRDSPIASDCMGVSVYRYKVYAFVISAGFSGLAGCLYSYSEQYISPNTYNFELTILF 242 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + +I+GG + + +AI++ + +L ++ + + L L Sbjct: 243 LLAIIMGGRKTRAGALLGSAIIVLLPKLLDDIDMFRTVASLLAAVVMIGASVAL 296 >gi|288959868|ref|YP_003450208.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288912176|dbj|BAI73664.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 612 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 79/324 (24%), Positives = 143/324 (44%), Gaps = 29/324 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 AV L L L Q Y+ +Y + A L++V G++G +SL AIGA Sbjct: 317 AVWGLAALALALPLVVRQPYLLQTLGNAWLYALLALSLTLVAGTVGQVSLGHAGLLAIGA 376 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L G+ + L +P++ +++ A G + P+ + RG Y++IATL + EI +++ Sbjct: 377 YASALLALDAGVPVLLAVPLAGLVAAALGTALVYPAFRLRGHYVSIATLAVGEIVTLVIL 436 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W+ +T G G+ L ++ ++Y+V L + + A++ Sbjct: 437 NWESLTRGPIGVTGIPPLS--------------VAGKPLVSGQWVYWVPLVLLLVFAALQ 482 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + + R IR++ A S + K AFAV+ G+ GA A I+ Sbjct: 483 SRLLNSHLGRTLRAIREDDVAARSYGVDLNRYKGLAFAVAGFVAGVGGALMAHFYSYINH 542 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +++ +++VILGG+ +++ A+L+G+ EL Y Sbjct: 543 ETFPAPVSMLALTMVILGGLGNVAGAVLGAAVLVGLPELFRAAAEY-------------- 588 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + L L+I R LL Sbjct: 589 -RMLIYGVVLLLLIRFRPQGLLGT 611 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 107/309 (34%), Gaps = 25/309 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + + IY + A GL+++ G L++ Y +GAY + ++ L + + Sbjct: 11 DYTINGLVIGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAYIGWLCVTKLNLPLPVTF 70 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V A G G ++ L+ + IA L+ + +L + + Sbjct: 71 VVVAAGCGLLGAVIERVGLRPLRNAPRIAPLLATIGLSVVLDQSAQLLFSPD-------- 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + +R + +A + +LR T + A R + Sbjct: 123 ---PRALPTQLPTWRIAIGGGSIGALDLLIAGVGIGSAALLYGFLRFTKLGWAVRATALD 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA++SA G++G + I P+M F + I ++G Sbjct: 180 RDAAQQCGVDVDKVNRTVFAIASALGGVSGLLVGMYYNTIDPNM-GFQAGLKGIVAQLIG 238 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L + + +AL L++++R Sbjct: 239 GVGNVPGAIAGSLLLGLIESYGIALFG-------------TSYRNLFAFVALILILVLRP 285 Query: 337 HSLLRLRTP 345 + L Sbjct: 286 NGLFAGTRR 294 >gi|328886344|emb|CCA59583.1| Branched-chain amino acid transport system permease protein LivM [Streptomyces venezuelae ATCC 10712] Length = 494 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 124/320 (38%), Gaps = 12/320 (3%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 ++ G+ + + A G++++ G+ G LS+ A+GAY Y Sbjct: 31 PFYLDRFWLQAGLFAMAAALGAIGINLLTGATGQLSMGHAFFLAVGAYGYCAFAGDGADG 90 Query: 92 I-------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + WL ++ ++G G + + + RG YL IATL + I Q++L +T Sbjct: 91 LAGLGLPGWLAAVLAVALAGLAGGVFSPIAGRLRGAYLGIATLALIFIGQHVLFNAHDLT 150 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G V F T + + + P V ++ L + + R Sbjct: 151 GGYNGRAVPPLSLFGLTFDDTELLVAQVPFGAVEKLWYL---GLVLLLAGFLFARGVLRG 207 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A IRD++ A + + + + F +SS + G+AG A R P+ F + Sbjct: 208 RPGRAMNAIRDHRIAAGVMGIPVARYRAAVFVLSSMYAGLAGVLLALVFQRTVPEYFGMA 267 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNMRHTT 322 ++ ++++++GG+ S++ + + +L + ++ + Sbjct: 268 LSLEYLAMIVIGGLGSVAGAVAGGVFVSLLPQLLNRYSDALPLVSAPGTGGIAPGEAARY 327 Query: 323 LMVIALFLVILMRSHSLLRL 342 L A+ V+L L L Sbjct: 328 LYGAAVVAVVLFLPGGLAGL 347 >gi|296136848|ref|YP_003644090.1| inner-membrane translocator [Thiomonas intermedia K12] gi|295796970|gb|ADG31760.1| inner-membrane translocator [Thiomonas intermedia K12] Length = 373 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 87/346 (25%), Positives = 155/346 (44%), Gaps = 19/346 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L+ L + + + ++Y+M A GL+IVVG GLL L + Y Sbjct: 7 WVWIVAGAAALIALPMVLQIAGDAWVRIAAFAMLYIMLALGLNIVVGLAGLLDLGYIAFY 66 Query: 75 AIGAYSYVILGSR----------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY Y +L S + +SIWL++P++A ++ + G+ +G P LK R Sbjct: 67 AVGAYLYALLSSNQLTSNFDALGAMFPNGFDVSIWLVVPMAAALAASAGIALGTPVLKLR 126 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + + N G ++ + L + S + Sbjct: 127 GDYLAIVTLGFGEIIRIFMNNLNAPINITNGPQGISGIHGIRLFGWDLNQNINIGSFTIP 186 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+ L + + L+ + I AW +R+++ A ++ KL AF++ Sbjct: 187 SVAQYYYLFLVLVVFVVILSYRLQDSRIGRAWMAMREDEIAAKAMGINTRNMKLLAFSMG 246 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + F G+AG F+A + +SP+ F E+IIV+++V++GGM + + +L + E Sbjct: 247 ATFGGVAGVMFSAFQGFVSPESFSLLESIIVLAMVVIGGMGHIPGVILGAVLLSVLPEAL 306 Query: 299 CGMNFYYFNSLLKFD---CSFNMRHTTLMVIALFLVILMRSHSLLR 341 M F F + + +A+ +++++R L Sbjct: 307 RYMGFISDWQQHTFGHVYMDSGILRQLIYALAMIIIMILRPKGLWP 352 >gi|187777547|ref|ZP_02994020.1| hypothetical protein CLOSPO_01138 [Clostridium sporogenes ATCC 15579] gi|187774475|gb|EDU38277.1| hypothetical protein CLOSPO_01138 [Clostridium sporogenes ATCC 15579] gi|322804737|emb|CBZ02289.1| branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) [Clostridium botulinum H04402 065] Length = 314 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 29/331 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L + L + +YI + I IL+Y + + L+ V G+ G +S+ Y IG Sbjct: 9 IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL L + + +++G CG+ +G+PSL+ +G+YL I TL EI + IL Sbjct: 69 AYTTSILMISAHLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W +T G GI FL + YY++L + + I Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVFFVI 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + +R+N+ A SL I KL +F +SS G+AG F+A IS Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+I ++++VI+GG ++ +L + EL N Y Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY------------- 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L L+I+ R + L+ F Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310 >gi|49088298|gb|AAT51554.1| PA4911 [synthetic construct] Length = 426 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 95/329 (28%), Positives = 155/329 (47%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V +L+ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 98 IVPLILVAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G L+ GDYLAI TL EI + +L Sbjct: 158 GLALGYQYLGLGFWTVLPLAALTAAVAGAILGFXVLRMHGDYLAIVTLGFGEIIRLVLNN 217 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ + R + F + + +F+Y VL + Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R + AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 278 LVLYIEHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ I + ++++ R L+R Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411 >gi|187477767|ref|YP_785791.1| ABC transporter ATP binding/permease [Bordetella avium 197N] gi|115422353|emb|CAJ48878.1| ABC tranpsorter, ATP binding/permease protein [Bordetella avium 197N] Length = 597 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 112/323 (34%), Gaps = 23/323 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ L + + Y + + I + GLS V+G G +SL IG Sbjct: 18 IWIMMALTVIGLALVNQLPTYYVGLLAMVGINALVCIGLSFVLG-TGQVSLGHAAFVGIG 76 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS IL +G+ L IP+S + A +G +L+ +G L +ATL Sbjct: 77 AYSCAILSRDFGVPTLLTIPISVALCMAVAYFLGRITLRLKGHSLPLATLAWGMAIYVCF 136 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + IT G +G L G T+ + + V + L+ Sbjct: 137 VAAINITGGASGFSDIPPLNAFGLTLDTRG---------------ITIVAWVLVALTYLA 181 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + R + + I+ + + K+ F +S+A +AG +A +S Sbjct: 182 YRRIYRGRVGRIAKAIKGQSTMATAFGADVPAVKMKVFVMSAALAALAGCLYAYYMRFLS 241 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + + +V+LGG+ + + + Sbjct: 242 PTSFTIGASFNYLIMVVLGGVAHPVGAILGAVTFMLMELGAQYLFAKVLG-------VPG 294 Query: 318 MRHTTLMVIALFLVILMRSHSLL 340 T L + L L++L LL Sbjct: 295 QMETMLFGVILILMLLRWPDGLL 317 >gi|218894006|ref|YP_002442875.1| putative permease of ABC branched-chain amino acid transporter [Pseudomonas aeruginosa LESB58] gi|218774234|emb|CAW30051.1| probable permease of ABC branched-chain amino acid transporter [Pseudomonas aeruginosa LESB58] Length = 425 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V +L+ + + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY Sbjct: 98 IVPLILMAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL W ++P++A+ + G I+G P L+ GDYLAI TL EI + +L Sbjct: 158 GLALGYQYLGLGFWTVLPLAALTAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217 Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 W T G G+ + R + F + + +F+Y VL + Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L I L R + AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ Sbjct: 278 LVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P F F E+ ++++IV+LGGM S + A +L EL Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ I + ++++ R L+R Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411 >gi|168181328|ref|ZP_02615992.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum Bf] gi|182675291|gb|EDT87252.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum Bf] Length = 314 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 87/331 (26%), Positives = 145/331 (43%), Gaps = 29/331 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L + L + +YI + I IL+Y + + L+ V G+ G +S+ Y IG Sbjct: 9 IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL L + + +++G CG+ +G+PSL+ +G+YL I TL EI + IL Sbjct: 69 AYTTSILMINAHLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W +T G GI FL + YY++L + + I Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVFFVI 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + +R+N+ A SL I KL +F +SS G+AG F+A IS Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+I ++++VI+GG ++ +L + E N Y Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPEFLREFNDY------------- 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L L+I+ R + L+ F Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310 >gi|296136030|ref|YP_003643272.1| inner-membrane translocator [Thiomonas intermedia K12] gi|295796152|gb|ADG30942.1| inner-membrane translocator [Thiomonas intermedia K12] Length = 344 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 137/335 (40%), Gaps = 30/335 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + + L L + + +L + Y+ S+ IY + GL++V G G L+ Sbjct: 1 MKRLPRFLPWLVPLTAAVALPWLA--RGNDYVLSVLTLAYIYAVAGLGLNLVTGYTGQLN 58 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY+ IL +G+ W +S ++ G+ +G SL+ RG Y AI TL Sbjct: 59 LAHAGFMAIGAYTVGILTVDHGVGFWWAFALSGFVAAIFGVPIGWLSLRLRGHYFAIFTL 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + I ++ KW +T+G GI Y++ Sbjct: 119 CVGVIINLVIEKWDALTHGVVGILGIPVPP-------------GAGDLQFDSPREQYFLA 165 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L ++L + R+ + ++ +R+++ +L ++ KL AF +S + G+AG Sbjct: 166 LFFLVCCTWVMLRIVRSLVGRSFMAVRNSEPLAEALGIPLMRTKLLAFVLSVFYAGLAGG 225 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + +SPD+ + +++ +++GG+ +++ +L + + M Y Sbjct: 226 LYAGTIRFLSPDLANIAHTFDIVTAMLIGGIGTVAGPIVGALVLPWITQYLQFMENY--- 282 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L ++++ ++ Sbjct: 283 ------------RMLVFGPLLVVLLIFLPAGIVGT 305 >gi|260220660|emb|CBA28423.1| High-affinity branched-chain amino acid transport system permease protein braE [Curvibacter putative symbiont of Hydra magnipapillata] Length = 374 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 85/328 (25%), Positives = 152/328 (46%), Gaps = 17/328 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY- 88 + L++V+ A GL+IVVG GLL L V +AIGAY Y ++ S + Sbjct: 35 FVLQGFGNAWVRIADMALLFVLLALGLNIVVGYAGLLDLGYVAFFAIGAYMYGLMSSPHL 94 Query: 89 ---------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +WL+IP+ A ++G G+++G P+L+ RGDYLAI TL EI Sbjct: 95 IETFPAIAAMFPDGMHTPLWLVIPLGAALAGIFGVLLGAPTLRLRGDYLAIVTLGFGEII 154 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + N G +++ L +L + + YY+ L + + Sbjct: 155 RVFMNNLDHPVNITNGPKGINQIDSLHFFGLNLGKKLMIGDFEIASVTLYYYLFLTLVVV 214 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 S I L + + AW IR+++ A ++ KL AF + + F G++GA FA+ + Sbjct: 215 SVIICHRLELSRVGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGATFGGVSGAMFASFQ 274 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ISP+ F E+++++++V+LGG+ L + +L + E+ + ++ Sbjct: 275 GFISPESFSLMESVMIVAMVVLGGVGHLPGVILGAVLLAALPEVLRYVAGP-LQTMTDGR 333 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ L+ +A+ V+L+R L Sbjct: 334 LDASILRQLLIALAMISVMLLRPRGLWP 361 >gi|153939275|ref|YP_001389827.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum F str. Langeland] gi|152935171|gb|ABS40669.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum F str. Langeland] gi|295317914|gb|ADF98291.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum F str. 230613] Length = 314 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 29/331 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L + L + +YI + I IL+Y + + L+ V G+ G +S+ Y IG Sbjct: 9 IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL L + + +++G CG+ +G+PSL+ +G+YL I TL EI + IL Sbjct: 69 AYTTSILMISAHLPFITAMLLGGLLAGICGIFLGIPSLRIKGNYLCIITLGFGEIVKLIL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W +T G GI FL + YY++L + + I Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVFFVI 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + +R+N+ A SL I KL +F +SS G+AG F+A IS Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+I ++++VI+GG ++ +L + EL N Y Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY------------- 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L L+I+ R + L+ F Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310 >gi|158313874|ref|YP_001506382.1| inner-membrane translocator [Frankia sp. EAN1pec] gi|158109279|gb|ABW11476.1| inner-membrane translocator [Frankia sp. EAN1pec] Length = 478 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 81/315 (25%), Positives = 137/315 (43%), Gaps = 31/315 (9%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------LGSRYGLSI 92 ++ +I IY + A GL++VVG GLL L + +AIGAY+ + + ++ Sbjct: 151 ALVSEIGIYALLALGLNVVVGYAGLLDLGYIAFFAIGAYTTAYVTSADAMPWHAPWQVNP 210 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + +PV+ +++ G+++G P+L+ RGDYLAI TL EI Q + +T G G++ Sbjct: 211 FFALPVALVVAAVAGVVLGGPTLRLRGDYLAIVTLGFGEIVQLLANNADGVTGGPRGVFG 270 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 L + S+ + + YY+L+ + L + R+ AW Sbjct: 271 LPPLS---------VDLPGVHYSWGLRPLPYYYLLVVLIVLVMVVFGRWERSRTGRAWTA 321 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR ++ A + + KL AFAV ++ G AG A + +P F +++V++I Sbjct: 322 IRQDEVAAEATGVATMRMKLLAFAVGASVSGFAGVVLATKQFF-NPQTFGLQSSLLVLTI 380 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 VI GGM S + +L G L D + L++ Sbjct: 381 VIFGGMGSRLGVVLGALVLQGTAFLLR-------------DTVPPADRYIYFGAVVILMM 427 Query: 333 LMRSHSLLRLRTPSN 347 + R LL R P Sbjct: 428 IFRPQGLLPPRGPRA 442 >gi|237793782|ref|YP_002861334.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum Ba4 str. 657] gi|229261837|gb|ACQ52870.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum Ba4 str. 657] Length = 314 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 87/331 (26%), Positives = 145/331 (43%), Gaps = 29/331 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L + L + +YI + I IL+Y + + L+ V G+ G +S+ Y IG Sbjct: 9 IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL L + + +++G CG+ +G+PSL+ +G+YL I TL EI + IL Sbjct: 69 AYTTSILMINAHLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W +T G GI F F + YY++L + + I Sbjct: 129 LNWDKVTGGPMGISSIPSPE--------------FLGIFKDKNLGFYYLILLLFVVFFVI 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + +R+N+ A SL I KL +F +SS G+AG F+A IS Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+I ++++VI+GG ++ +L + E N Y Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPEFLREFNDY------------- 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L L+I+ R + L+ F Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310 >gi|152994763|ref|YP_001339598.1| inner-membrane translocator [Marinomonas sp. MWYL1] gi|150835687|gb|ABR69663.1| inner-membrane translocator [Marinomonas sp. MWYL1] Length = 424 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 21/331 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ ++ +++ L + KY+ ++ I LIYV+ GL+IVVG GLL L V YAI Sbjct: 95 MVWIIPLVIVIGLLVPFIASKYVLTVVILGLIYVLLGLGLNIVVGLAGLLDLGFVGFYAI 154 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY + GL W ++P++A+++ G I+G P L+ GDYLAI TL EI + I Sbjct: 155 GAYGLALGYENLGLGFWSMLPIAALMAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLI 214 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTT------VRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 L W T+G G+ +F ++ FF P +F+Y VL + Sbjct: 215 LTNWASFTHGPNGVSAPLPTFFGLEFKRRSSDGQTFHEFFNIPYDSAYKYMFIYIVLFAV 274 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + I L + I AW +R+++ A SL + KLSAF + ++ G+AG FFA Sbjct: 275 VWAVLFIKHRLVKMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMLGASTGGLAGVFFA 334 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + ++P F F E+ ++++IV+LGGM S + A L + E+ Y Sbjct: 335 TYQGFVNPSSFTFFESALILAIVVLGGMGSTLGVVIAAFCLTVLPEVLREFAEY------ 388 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + I + ++++ + ++R Sbjct: 389 ---------RVLMFGILMVVMMIWKPRGIVR 410 >gi|257784340|ref|YP_003179557.1| inner-membrane translocator [Atopobium parvulum DSM 20469] gi|257472847|gb|ACV50966.1| inner-membrane translocator [Atopobium parvulum DSM 20469] Length = 401 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 117/338 (34%), Gaps = 19/338 (5%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 I +L ++ +G +Y + QI +YV+ L+IV G LG L L Sbjct: 34 RYAINAILVALFVFGGNFLVGEGLISRYQTVVFEQIGVYVLMTVSLNIVTGYLGQLPLGH 93 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +IG Y+ I R L + ++ + L + + A + M Sbjct: 94 AGFMSIGGYACAIFIIRMMPLFGL---DAQSMASGSTPAVILFVVGLLFGGICAALMGMV 150 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV-LLG 189 + ++ + G R+ + + S + Y+ Sbjct: 151 IGIPALRLRGDYLAIITLGFAEIIRVVLVNIDSALGFKLTGGASGLTGIPAYTGYLNTAI 210 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ I L ++ A IRDN+ A + + K AF S+ G+AG + Sbjct: 211 VVSLAIFAIHTLMKSRHGRAILAIRDNEIAAEASGVNTTYYKTLAFVFSAFIAGIAGGLY 270 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A ++P F F +++ ++ +V+LGGM S+ + +L + E Y Sbjct: 271 AGCIGVMAPAKFGFMKSVEILVMVVLGGMGSMFGSVVSATVLTVLPEALRAFADY----- 325 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 I L LV++ R L S Sbjct: 326 ----------RMVAYAIVLILVMIFRPEGLFGSYDFSL 353 >gi|146342120|ref|YP_001207168.1| putative high-affinity branched-chain amino acid transport system permease [Bradyrhizobium sp. ORS278] gi|146194926|emb|CAL78951.1| putative high-affinity branched-chain amino acid transport system permease protein [Bradyrhizobium sp. ORS278] Length = 357 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 145/343 (42%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF + ++ I ++ + + ++ S+ IQI I+ + A GL+I+VG Sbjct: 21 TIFPTKTSRNFAIAGVILLCFA--------PQVFSEFWLSIAIQIGIFSIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +S+ + +GA++ + + Y + ++ IP++ +I+ G++ GLP+ + +G Y Sbjct: 73 FTGQISIGQAGFFLLGAFTSAYINNTYAIPVFFAIPLAGVITALVGLVFGLPAARLKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L IATL I + + + + G F T Sbjct: 133 LVIATLAAQYILLDFFSRAEWFSGGSVPASANPFSIFGYTLRGDRQY------------- 179 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +YV+L + ++ L RT A IRD+ + + + + +F +++ F Sbjct: 180 --FYVVLAYVLVCYILVTNLMRTRDGRALIAIRDHYLSAEIMGINLTKYRTLSFGLAAFF 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA +A + +S + F +I+ ++++I+GG S+ TA ++ + E + Sbjct: 238 AGIAGALYAHYQLVVSQEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPESMELL 297 Query: 302 NFYYFNS----LLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + Y L + + + + + ++ L Sbjct: 298 SHYLKGGAIDKALALNNNITFLREIAIGLIIIAFLMFEPDGLA 340 >gi|148264183|ref|YP_001230889.1| inner-membrane translocator [Geobacter uraniireducens Rf4] gi|146397683|gb|ABQ26316.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Geobacter uraniireducens Rf4] Length = 337 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 137/324 (42%), Gaps = 29/324 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ + L L + S Y+ ++ + + I M A L++++G G +SL + + Sbjct: 21 VIKFIIFAALILLVPLIFSGGYMMNVLVFVGINTMLAVALNLLLGFTGQISLGQAAFFGL 80 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY +L + + ++ WL + ++A+ G +G P LK +G YLA+ATL + I I Sbjct: 81 GAYVSGVLTASHSVNPWLAMVIAAISIGLIAFFIGFPILKLKGHYLAMATLGLGIIVYII 140 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + +T G +G+ L + + YY++ + Sbjct: 141 FNETVELTGGPSGLSGIPNLSLGKLAFDNDYKN--------------YYLIWTFTLVIML 186 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + L + I A R I D++ A + K+ F +S+ +AG+ +A + I Sbjct: 187 LSINLVNSRIGRALRAIHDSEVAARVMGVNARLLKVQVFTLSAVVSSLAGSLYAHTMTFI 246 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F F+ +I ++++VI+GG+ S+ +L + E+ Y Sbjct: 247 SPASFGFNFSIELVTMVIIGGLGSIYGSFLGAVLLTLLPEILRAFQDY------------ 294 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 + + L L+ + L+ Sbjct: 295 ---DIVIYGLLLILMTMFMPGGLV 315 >gi|219849302|ref|YP_002463735.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485] gi|219543561|gb|ACL25299.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485] Length = 352 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 83/320 (25%), Positives = 140/320 (43%), Gaps = 10/320 (3%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + +L+ + + +Y ++ I I + A GL+I+VG G +S+ A+GAY Sbjct: 26 IVLVLVLALIFPWFADRYWLNLANTIAIAAIGAIGLNILVGYTGQISIGHGGFLAVGAYI 85 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 ++ G +WL IPV++ + A G GLPSL+ +G YLAIATL EI +L Sbjct: 86 AGLMAVHLGTPMWLTIPVASFFTAAVGAFFGLPSLRLKGLYLAIATLASQEIIIWLLTHG 145 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 K + G++ L S F + Y+V L + + + Sbjct: 146 KLLGIGES----------LTLPRASNNLFGLPMEWLGNNDFAFYWVCLILLIGTVIFVSN 195 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L RT A+ IRD A + + KL AFA SS F G+AGA A R IS + Sbjct: 196 LFRTRAGRAFVAIRDQDIAAQVIGVDLFRYKLLAFATSSFFAGLAGALTAHYRGVISWER 255 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F +I+ ++++I+GG+ S+S A + + L + + + + Sbjct: 256 FTIDTSILYLAMIIIGGLGSVSGSIYGAAFMTLLPALLSNLARALSDVVPNINSYLPYMQ 315 Query: 321 TTLMVIALFLVILMRSHSLL 340 +A+ L ++ ++ Sbjct: 316 QGAFGLAIILFLIFEPEGIV 335 >gi|121607604|ref|YP_995411.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gi|121552244|gb|ABM56393.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 647 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 16/292 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L L + Y M I+IY + +GL IVVG G +SL + +GA Sbjct: 8 IAVPGLALLAAMPLFIGNPYYIHMIGTIMIYAILLFGLDIVVGYTGQVSLGHAGLFGVGA 67 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L + G +WL++ ++ G ++ LP+L+ G YLA+ TL I Q ++ Sbjct: 68 YTAGVLFLKLGAPLWLIMVACIGVTAVFGALLALPALRVSGPYLAMVTLAFGTIIQILIN 127 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + +T G GI + + Y+++L + L+ ++ Sbjct: 128 EMGFLTEGPLGIKIPKPSIAGMKLDDN----------------GFYWLVLALMALALLVV 171 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + R+ A+ +R + A + ++ K+ AF +S+ F G+AG +A S ISP Sbjct: 172 DRILRSHYGRAFEALRGSPVASDCMGVSVYRYKVYAFVISAGFAGLAGGLYAYSEQYISP 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + F ++ + VI+GG + S AI++ + +L + + + + Sbjct: 232 NTYNFELTVLFLLAVIMGGRKTRSGALLGAAIIVILPKLLDDLELFRIVASV 283 >gi|170746744|ref|YP_001753004.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] gi|170653266|gb|ACB22321.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] Length = 682 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 76/371 (20%), Positives = 149/371 (40%), Gaps = 45/371 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L+++ +L + +V L +F + Y + + I IY + GL IVVG G +S Sbjct: 19 LSRHMGVLGAVLLVVGLAVF---PHVVTSSYYIHLMVVIAIYAILILGLDIVVGYTGQVS 75 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L + +GAYS +L + L IW I ++ A G+++ +P+L+ G YLA+ TL Sbjct: 76 LGHAGLFGVGAYSAAVLFLHFKLGIWWGILAGIGVTSAFGVLLAVPALRVTGPYLAMVTL 135 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 I Q + + P+TNG GI + + + P ++ YY++ Sbjct: 136 AFGTIVQIFINELTPLTNGPLGITLPPARVLDFSLLGLQA-----PWGAAGRKLEFYYLV 190 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++ + R+ A+ +RD+ A + ++ K+ AF +S+A G+AGA Sbjct: 191 CLALLATILVVNRVVRSPYGRAFEALRDSPIACDCMGVSVYRYKVYAFVISAALAGLAGA 250 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 FA S ++P+ + F ++ + V +GG S + +AI++ + + + Sbjct: 251 LFAWSERYVAPNSYGFELTVLFLLAVTMGGRKSRAGPIIGSAIIVMMPNVLADIGLVRIM 310 Query: 308 SLLKFDC-------------------------------------SFNMRHTTLMVIALFL 330 + + S T+ + + Sbjct: 311 AGIIAAAALVVGGLAFLRRRENRYALLVPVGLCLAFFPATLALESVTDFRLTVFGLMILF 370 Query: 331 VILMRSHSLLR 341 V+ ++ Sbjct: 371 VVYYLPDGIVG 381 >gi|95930558|ref|ZP_01313293.1| inner-membrane translocator [Desulfuromonas acetoxidans DSM 684] gi|95133393|gb|EAT15057.1| inner-membrane translocator [Desulfuromonas acetoxidans DSM 684] Length = 332 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 129/323 (39%), Gaps = 29/323 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V L + + Y + + I+V+ GL++ +G G +SL + +G Sbjct: 18 LTVTLLCALIVLYPLVQDNPYTLGLSNLVAIHVIVVLGLNLFIGYAGQISLGHAAFFGLG 77 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I Y LS W + A++ +I+G+P+L+ G YLA+ATL + + +L Sbjct: 78 AYGSAIGTVTYELSPWPTMFGVAVLVALLALIIGVPTLRLSGHYLAMATLGFNLVVYTVL 137 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W +T G +G Y L +RF Y++ M LS + Sbjct: 138 QQWDEVTGGVSGFYGIPSLAIGNFVFDDEVRFH--------------YLVWAMALLSLLL 183 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L R+ + + ++ A +L +K+ F +S+ +AG+ +A + IS Sbjct: 184 CLNLVRSGVGRGLAALAGDETAAAALGVNTQISKVKVFVLSAVLASVAGSLYAHCYNYIS 243 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + ++ +V++GGM S+ ++ + E Y Sbjct: 244 PASFDIFVSTDLVIMVVIGGMGSIWGSLFGATLITLLPEWIDVFESY------------- 290 Query: 318 MRHTTLMVIALFLVILMRSHSLL 340 + L LV++ + Sbjct: 291 --KDFVHGGILVLVLMFLPQGFV 311 >gi|325971926|ref|YP_004248117.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy] gi|324027164|gb|ADY13923.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp. Buddy] Length = 305 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 20/306 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + I IY + A G +I+ G G+LSL +AIG+Y+ IL +R+G S W + Sbjct: 3 NFFLLILIYAGIYALMALGQNIITGYGGMLSLTQAGFFAIGSYATAILATRFGWSFWATL 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 PV+A++S G+++GLP+L+ +GDYLAIATL EI +N+L W +TNG GI Sbjct: 63 PVAALLSAFFGLVIGLPTLRLKGDYLAIATLGFGEIVRNVLNNWDKVTNGPMGIQKIPMP 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G T+ + ++L+ ++ + L R+ + A +R++ Sbjct: 123 VLFGFTLNPYK------------KYAFLFILIITVLIAYLLFQRLARSRMGRALTAVRED 170 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A S+ I K+ AF + ++ G+AG+F A ++P + F +I+V+ +V+LG Sbjct: 171 EIAAQSMGINITKYKVYAFILGASVAGIAGSFQAVFTLSVTPGTYTFMVSIMVLCMVVLG 230 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM + I+ + Y L + L ++++ R Sbjct: 231 GMGNFKASILGAFIIQLI--------SYLPQLTGLSSVIPPQFKQILFGLILVVMMIWRP 282 Query: 337 HSLLRL 342 LL Sbjct: 283 QGLLGR 288 >gi|170740061|ref|YP_001768716.1| ABC transporter-like protein [Methylobacterium sp. 4-46] gi|168194335|gb|ACA16282.1| ABC transporter related [Methylobacterium sp. 4-46] Length = 679 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 75/359 (20%), Positives = 138/359 (38%), Gaps = 43/359 (11%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 +Y + I IY + GL IVVG G +SL + +GAY+ +L ++ Sbjct: 41 FPHLVGSQYYIHLVTVIAIYAILILGLDIVVGYTGQVSLGHAGLFGVGAYAAAVLFLKFK 100 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L IWL + ++ A G+++ +P+L+ G YLA+ TL I Q + + +TNG G Sbjct: 101 LGIWLGLLAGIGVTAAFGLLLAIPALRVSGPYLAMVTLAFGTIVQIFINEMTDLTNGPLG 160 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 I + + + P + YY++ L+ ++ + R+ A Sbjct: 161 ITLPPA-----RVLDFSLLGLSSPWGAAGRRLEFYYLVCACLLLTILVVNRVVRSPFGRA 215 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + +RD+ A + ++ K+ AF +S+ G+AGA FA S ++P+ + F ++ Sbjct: 216 FEALRDSPIACDCMGVSVYRYKVYAFVISAGLAGLAGALFAWSERYVAPNTYGFELTVLF 275 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY------------------------ 305 + V +GG S S AI++ + + + Sbjct: 276 LLAVTMGGRKSRSGPLIGAAIVVMMPNILADIELVRMMAGGIAALAVAILAVAFLRRREN 335 Query: 306 -------------FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR-LRTPSNFLE 350 F S T+ + + V+ ++ LR FL Sbjct: 336 RFALLVPALLCIAFFPATLALQSVTDYRLTVFGLMILFVVYYLPEGIVGYLREKLPFLR 394 >gi|256425031|ref|YP_003125684.1| ABC transporter [Chitinophaga pinensis DSM 2588] gi|256039939|gb|ACU63483.1| ABC transporter related [Chitinophaga pinensis DSM 2588] Length = 615 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 119/321 (37%), Gaps = 26/321 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + LL + Y S ++I I+ +FA +I+ G GLLS + + G Y + Sbjct: 10 FFLLFIPLTAGAFANAYFQSFIMEIFIWSLFAMSFNIIYGYTGLLSFGVSLFFGAGCYGF 69 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + + LSI + + ++ A + GL LK R Y I +++++ I + + Sbjct: 70 ALSLIHWQLSIPGALLFAIALTTALATLTGLLVLKIRSHYFVIVSVLLTLIPFYLANHFP 129 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 IT G GI V+ + MY+ + + L + Sbjct: 130 QITGGDDGIS-----------VQLSDKLIPGTGLSPYNPRHMYWTVCSLAILVLFLCYRF 178 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 ++ + + +R+N+ L + A+ VS+ G+AG+ + + S F Sbjct: 179 LKSPVGLILKGLRENEVRAQFLGYNTHRYQFLAYIVSAVLAGIAGSLYVLAFKYTSSIFF 238 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 +S + I I GG + TA + + YY Sbjct: 239 LWSLSGEAIIWTISGGRGTFLGPFIGTAGFLLFKDELSSRVEYYP--------------- 283 Query: 322 TLMVIALFLVILMRSHSLLRL 342 ++ I L L+I R + L+ + Sbjct: 284 LIVGICLILLIRYRKNGLMGM 304 >gi|317121495|ref|YP_004101498.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter marianensis DSM 12885] gi|315591475|gb|ADU50771.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter marianensis DSM 12885] Length = 381 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 83/340 (24%), Positives = 139/340 (40%), Gaps = 42/340 (12%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 ++ + ++ L A ++ +++ + + I V+ A L IV+G G S+ Sbjct: 7 RTALIAAGLALVYGVVQFLLSAGILGRFYENVLMNVGINVLAAVSLHIVLGLAGQFSIGH 66 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 A+GAY+ +L + G+ + + A + G+I+G+PSL+ RGDYLAIATL + Sbjct: 67 AGFLAVGAYTSAVLTEKLGVPFAVALLAGAAAALVAGLIVGIPSLRLRGDYLAIATLGFA 126 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 EI + IL+ + G AG+ VA + + + Sbjct: 127 EIVRIILLNVDYV-GGAAGMRVAHLTSWTSLYLSVVAAVLVAV----------------- 168 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 R+A A +RD++ A ++ K+ AFA+SS F G+AG A Sbjct: 169 ---------HFTRSAHGRATLALRDDEVAAAAMGVNTTAYKVLAFALSSFFAGLAGGLHA 219 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + I P+ F F ++ ++ V+LGG+ SL A L V Sbjct: 220 HNFYVIQPNNFGFLKSFEILVFVVLGGVGSLPGAILAATFLTLVSTALQAY--------- 270 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L + L LV+L R LL +T + F Sbjct: 271 ------PEARMILYSLVLILVMLFRPQGLLGTQTLAGFFP 304 >gi|332294992|ref|YP_004436915.1| ABC-type transporter, integral membrane subunit [Thermodesulfobium narugense DSM 14796] gi|332178095|gb|AEE13784.1| ABC-type transporter, integral membrane subunit [Thermodesulfobium narugense DSM 14796] Length = 340 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 29/329 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++ L S +Y + IYV+ + GL+IV G GLL L + YA+GAY+Y Sbjct: 28 ILFVVALVYPFLASSQYYVHIMNLAFIYVVLSLGLNIVCGLAGLLDLGFIAFYAVGAYTY 87 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 IL + GLS W ++P++ + G+++G + + RGDY AI T+ EI + + Sbjct: 88 AILSIKLGLSFWEILPIACFATALFGLLVGSAAFRLRGDYFAIVTMGYGEIIRILANNLT 147 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +TNG GI R G Y++ L +S + Sbjct: 148 FLTNGPIGIAGIPRPTIFGFKFED--------------PFQYYFLALSFVTISIFLTYRF 193 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + I A IR+++ A S+ + KL +F + + G G FFA+ +SP+ F Sbjct: 194 QASRIGRALEAIREDEIAAVSMGVNLKNFKLISFIIGAMLGGSIGVFFASYATFVSPESF 253 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F E+++V+++V++GGM ++ IL+ + E ++ Y Sbjct: 254 SFMESVMVLAMVVIGGMGTIEGPVIGALILVFLPEALRSLSDY---------------RM 298 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + ++++ + P L+ Sbjct: 299 LIFGALMVFMMIVMPKGFMGWIKPRRILK 327 >gi|260893443|ref|YP_003239540.1| inner-membrane translocator [Ammonifex degensii KC4] gi|260865584|gb|ACX52690.1| inner-membrane translocator [Ammonifex degensii KC4] Length = 355 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 78/324 (24%), Positives = 135/324 (41%), Gaps = 15/324 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L L Y + Q+ I + A GL+++ G G +S+ +GAY+ Sbjct: 34 VLCLFALLLALPWLVGPYPLRIASQVAIMALGAVGLNLLTGFAGQISVGHAAFMGVGAYT 93 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L ++ GLS WL +P+ + + G GLPSL+ +G YLAIATL I ++ Sbjct: 94 VGALTTKLGLSFWLALPLGGLAAALVGAFFGLPSLRLKGLYLAIATLAAQVILDFAFVRL 153 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +PIT G AG+ + + + YYV+L + + L Sbjct: 154 EPITGGAAGLVLTPP---------------SLGPFSLADDTVFYYVVLALAVVGVIFALN 198 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R+ + A+ IRD A L + KL AF +SS + G+AG AA ++P+ Sbjct: 199 LSRSRVGRAFMAIRDRDLAAAMLGVDLFGYKLRAFFLSSFYAGLAGGMLAAYTRVVTPEQ 258 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F +I ++++++GG+ + A + + + + + Sbjct: 259 FTLDVSIQFLAMIVIGGLGDVLGSVYGAAFVSLLPIALSYLAQALQGVFPQMVNLLSACQ 318 Query: 321 TTLMVIALFLVILMRSHSLLRLRT 344 T L + + L ++ L +L Sbjct: 319 TALFGLVIILFLIFEPQGLAKLWR 342 >gi|163856026|ref|YP_001630324.1| branched chain amino acid ABC transporter [Bordetella petrii DSM 12804] gi|163259754|emb|CAP42055.1| Putative branched-chain amino acid transport system protein [Bordetella petrii] Length = 609 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 128/325 (39%), Gaps = 22/325 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + + +LL + + + ++ + I + + A GL ++ G GL S + Sbjct: 4 ILLIAFIVLLAVLPMVSATPEFWITQLNYIGLAALVALGLVLLTGVGGLTSFGQAAFVGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ ++ S YG S WL +PV +++ A ++G+ +L+ G YL + T+ + Sbjct: 64 GAYTTAVMTSHYGASPWLALPVGLLLTAAVAYLLGIITLRLSGHYLPLGTIAWGLSLYFL 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + GI + + G ++ S +YY++ LS Sbjct: 124 FGNLDWL-GKHDGIAGLEPISVFGFSLASGRH--------------IYYLIWICLLLSLW 168 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L + A R ++ S+ K+ F ++ ++G +A + + Sbjct: 169 ATSNLLSSRPGRAIRALKSGAGMAESMGVNTGSYKVVIFVWAALLACLSGWIYAHMQRAV 228 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F + I + + ++GG + +A+++G+ + + ++ F Sbjct: 229 SPSPFGLNYGIEYLFMAVVGGAGHVWGAVVGSAVILGLKDQLQNLLPALLDTDANF---- 284 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+ ++ L Sbjct: 285 ---ELIVFGVLLILVLQYAANGLWP 306 >gi|150019852|ref|YP_001312106.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] gi|149906317|gb|ABR37150.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] Length = 321 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 79/341 (23%), Positives = 139/341 (40%), Gaps = 41/341 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 NK + + + ++ +LF + A Y + LI V+ A L+++VG G L Sbjct: 5 FNKKNICIIVGVLITYGVLFGLISAKVINSYYKGIITFALINVILAVSLNLIVGFTGQLC 64 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L +IGAY I+ + + I + A+++ ++G P+LK GDY AI TL Sbjct: 65 LGHAGFMSIGAYVSAIITQKAHMPFVASILIGAVVACILAALVGYPTLKLTGDYFAITTL 124 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +I Q +++ + G G+ V Sbjct: 125 AFCQIIQIVIMNIDTV-GGARGLTGIPTKTTFT-------------------------VA 158 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 S II + ++ A +IR+N+ A S+ + K+ AF +++ F G+AG Sbjct: 159 FIFMIASIVIIKNIINSSQGRAMLSIRENEIAAESMGINALKYKMMAFVIAAFFAGLAGG 218 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A I PD+F F+++I ++ V+ GGM SLS + +L + EL M + Sbjct: 219 LYAHYSGYIKPDLFDFNKSIDYLTFVVFGGMGSLSGSIISAIMLTFLPELLRSMGDF--- 275 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + +AL L+++ R L + S Sbjct: 276 ------------RMVIYPLALILLMIFRPEGLFGDKEISLK 304 >gi|27378535|ref|NP_770064.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium japonicum USDA 110] gi|27351683|dbj|BAC48689.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium japonicum USDA 110] Length = 589 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 111/323 (34%), Gaps = 21/323 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 L+ L + + ++ I IY + A GL+++ G G++S + A Sbjct: 8 LAAMAALVCLAVAPFVLSPFSITLMNYIGIYSLVAIGLALLTGVGGIVSFGQAAFVGVAA 67 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ + + G S WL + ++ + I+G+ +L+ +G +L+++T+ + Sbjct: 68 YATAWVSALNGYSPWLGLLFGVALTCSVASILGVVTLRLQGHFLSLSTVAWGLAIGFLFG 127 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + GI + S ++ +Y+++ G+ + Sbjct: 128 NVEGL-GRFNGISSIPPIS--------------IGSIALVSSAQIYFLIWGIVAAVLLLG 172 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + + A R +R SL KL F +++ ++G +A ISP Sbjct: 173 YNLLDSRLGRAMRALRGGNTLVESLGINAFQIKLVTFVIAAFLASLSGWLYAHMSRFISP 232 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F I + + ++GG SL A++ + + Sbjct: 233 GPFDAGMGIEYLMMSMVGGAGSLLGGVVGAAVVTLLKNSVQDYLPLIAKG------ASGQ 286 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 L + ++ Sbjct: 287 LEIVAFSALFILFLQWARQGIVP 309 >gi|254384243|ref|ZP_04999587.1| branched chain amino acid transport permease [Streptomyces sp. Mg1] gi|254387261|ref|ZP_05002522.1| branched chain amino acid transport permease [Streptomyces sp. Mg1] gi|194343132|gb|EDX24098.1| branched chain amino acid transport permease [Streptomyces sp. Mg1] gi|194346067|gb|EDX27033.1| branched chain amino acid transport permease [Streptomyces sp. Mg1] Length = 576 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 77/347 (22%), Positives = 134/347 (38%), Gaps = 28/347 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + F +S + + ILI+ A GL++VVG GLL L V + Sbjct: 227 VTLIGSAAAAIAFPFIQQSGDTYTLIAVNILIFATVALGLNVVVGLAGLLDLGYVAFLGV 286 Query: 77 GAYSYVILGSR------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 GAY+ ++ + L W + V A+ S G+++G P+L+ RGDYLAI TL Sbjct: 287 GAYAAALVSGSTASAFGFQLPFWAAVIVGALASLIFGVVIGAPTLRLRGDYLAIVTLGFG 346 Query: 131 EIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 EIF+ + + G + L + + Y+++L Sbjct: 347 EIFRIAMGNLDGTSGPDITNGPNGIPNIPHLELFGWNFGESHNVGGIVLGAYANYYFLML 406 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + L + + I AW IR+++ A ++ KL AFA+ + G+AG Sbjct: 407 LVMALVILVFARAGNSRIGRAWVAIREDETAAEAMGINGFKVKLIAFALGATLAGLAGTV 466 Query: 249 FAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 A + P+ + F+ + +++ VILGGM ++ A+L + + Sbjct: 467 QAHVNSTVVPENYVFAGPVPPNSAFLLAAVILGGMGTIRGPILGAALLFLIPAKLAFLQD 526 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 Y IAL L++ R L+ + Sbjct: 527 Y---------------QLLAFGIALILLMRFRPEGLIANKRAQLEFH 558 >gi|220921170|ref|YP_002496471.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060] gi|219945776|gb|ACL56168.1| ABC transporter related [Methylobacterium nodulans ORS 2060] Length = 678 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 135/312 (43%), Gaps = 5/312 (1%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 + L+ +L + +Y + I IY + GL IVVG G +SL Sbjct: 23 RFAGLIGAGLLVLFLAAFPHVVTSQYYIHLLTVIAIYAILILGLDIVVGYTGQVSLGHAG 82 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 + +GAY+ +L ++ L IW+ + ++ A G+++ +P+L+ G YLA+ TL I Sbjct: 83 LFGVGAYAAAVLFLKFKLGIWVGLLAGIGVTAAFGLLLAIPALRVSGPYLAMVTLAFGTI 142 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 Q + + +TNG GI + + + P ++ YY++ Sbjct: 143 VQIFINEMTDLTNGPLGITLPPARVLDFSLLGLQA-----PWGAAGRKLEFYYLVCASLL 197 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + ++ + R+ A+ +RD+ A + ++ K+ AF +S+A G+AGA FA S Sbjct: 198 ATILVVNRVVRSPFGRAFEALRDSPIACDCMGVSVYRYKVYAFVISAALAGLAGALFAWS 257 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 ++P+ + F ++ + V +GG S S AI++ + + + + Sbjct: 258 ERYVAPNTYGFELTVLFLLAVTMGGRKSRSGPLIGAAIIVMMPNILADIALVRIMAGGIA 317 Query: 313 DCSFNMRHTTLM 324 + + + Sbjct: 318 ALALGILCVAFL 329 >gi|169830854|ref|YP_001716836.1| inner-membrane translocator [Candidatus Desulforudis audaxviator MP104C] gi|169637698|gb|ACA59204.1| inner-membrane translocator [Candidatus Desulforudis audaxviator MP104C] Length = 335 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 68/341 (19%), Positives = 131/341 (38%), Gaps = 20/341 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +N + K ++ V+ + LF Y + + +Y + A GL +++G G +S Sbjct: 1 MNYWAKNKNIILVLLVVTLFALFPLVVKSSYFLGIFVIAGLYSIVAVGLGLLLGYAGQVS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 Y +GAY+ IL YG L + + + ++G P L+ R YL + TL Sbjct: 61 FGQAAFYGLGAYTAAILSGTYGWPPLLALAAAPFLPAVVAAVIGRPILRLREHYLVLGTL 120 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + +L ++ +T G +G L + ++ +Y++ Sbjct: 121 GFGILVYILLKEFVGLTGGPSGYTGIPYLS--------------IGGLVLNTDVQFFYLV 166 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 FL+ L + I A R I ++ A + KL F +S+ G+AG Sbjct: 167 WFFAFLTLVGAWNLVNSRIGRALRAIHGSEVAAEAAGIDTARLKLKVFILSAFLAGLAGG 226 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A +SP F F +I + + ++GG ++ +++G++E + Sbjct: 227 LYAFYITFVSPSPFGFHASIQFVLMAVVGGAATVWGPVVGAFVIVGLIEFLR------WA 280 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + I L LV+L R +L + Sbjct: 281 VPVVLPKAGGEFEIIFFGIILVLVLLFRPEGILSHKRRRRL 321 >gi|160900785|ref|YP_001566367.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160366369|gb|ABX37982.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 359 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 89/340 (26%), Positives = 162/340 (47%), Gaps = 18/340 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + L++ + ++ + L+YV+ A GL++VVG GLL L V YA+G Sbjct: 10 ILGGLALMVLPLVLQYFGNAWV-RIADLALLYVLLALGLNVVVGYAGLLDLGYVAFYAVG 68 Query: 78 AYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 AY + ++ S + SIWL+IP++A+++G G+++G+P LK RGDY Sbjct: 69 AYMFALMASPHLADTFEGFAAMFPDGLHTSIWLVIPLAALLAGITGILLGIPVLKLRGDY 128 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI + + N G ++ + L + + Sbjct: 129 LAIVTLGFGEIIRIFMNNLDQPVNITNGPKGIGQIDSVKILGLDLAKRQEIFGYDISSVT 188 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 YY+ L + +S I L+ + I AW IR+++ A ++ KL AF + ++F Sbjct: 189 LYYYLFLFLVLVSIVICWRLQDSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASF 248 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G++GA FAA + +SP+ F E+I+++++V+LGG+ L + +L + E+ + Sbjct: 249 GGVSGAMFAAFQGFVSPESFSLMESIMIVAMVVLGGLGHLPGVILGAVLLSALPEVLRYV 308 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + ++ L+ +A+ +++LMR L Sbjct: 309 AGP-LQQMTDGRLDASILRQLLIALAMIVIMLMRPRGLWP 347 >gi|170758205|ref|YP_001785797.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A3 str. Loch Maree] gi|169405194|gb|ACA53605.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A3 str. Loch Maree] Length = 314 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 29/331 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L + L + +YI + I IL+Y + + L+ V G+ G +S+ Y IG Sbjct: 9 IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL LS + + + +++G CG+ +G+PSL+ +G+YL I TL EI + IL Sbjct: 69 AYTTSILMINAHLSFIIAMLLGGLLAGICGIFLGIPSLRIKGNYLCIITLGFGEIVKLIL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W +T G GI FL + YY++L + + I Sbjct: 129 LNWDKVTGGPMGISSIPNPEFLNIFKDKN--------------LGFYYLILFLFVIFFVI 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + +R+N+ A SL I KL AF +SS G+AG F+A IS Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGVNITSIKLFAFIISSFIAGIAGGFYATYVSFIS 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+I ++++VI+GG ++ +L + E N Y Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGAIIGAIVLAIIPEFLREFNDY------------- 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L L+I+ R + L+ F Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310 >gi|300310522|ref|YP_003774614.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300073307|gb|ADJ62706.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 404 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 98/377 (25%), Positives = 172/377 (45%), Gaps = 40/377 (10%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ N + LL ++ +++F F+ ++ + L+Y+M A GL++VVG Sbjct: 6 FDMKRNPQQARISLLLLLALMIVFPFVAQQFGNSWV-RIMDVALLYIMLALGLNVVVGFA 64 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRY--------------------------------GLS 91 GLL L + YAIGAYS +L S LS Sbjct: 65 GLLDLGYIAFYAIGAYSAGLLASPQFAAVIESFVNTYPSVGNFLVWLCGPEIVQNGIHLS 124 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW---KPITNGKA 148 +WL++P+SA+++ G ++G P+LK RGDYLAI TL EI + + ITNG Sbjct: 125 LWLIVPISALLAALFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNAPVNITNGPQ 184 Query: 149 GIYVADRLYFLGTTVRSLIRFFRF---PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 GI + D + G ++ + Y++ L +C + L+ + Sbjct: 185 GINLIDPIKVFGVSLAGEPGSGSMVKVFGMSMPSVNAYYFLFLLLCIGVIFFSVRLQDSR 244 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + AW IR+++ A ++ KL AFA+ ++F G+AGA F A + +SP+ F +E Sbjct: 245 LGRAWVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGAMFGAFQGFVSPESFSLTE 304 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLM 324 +I V+++V+LGG+ + + IL + E+ + ++ + L Sbjct: 305 SIAVLAMVVLGGIGHIPGVVLGGVILAALPEVLRHVVEPVQMAIFGKVWIDAEVLRQLLY 364 Query: 325 VIALFLVILMRSHSLLR 341 +A+ +++L R L Sbjct: 365 GLAMVVIMLTRPAGLWP 381 >gi|89901940|ref|YP_524411.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89346677|gb|ABD70880.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 363 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 94/360 (26%), Positives = 166/360 (46%), Gaps = 18/360 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + KI+ L LL+ + + ++ + L+YV+ A GL+IVVG GLL Sbjct: 1 MKQQQKIVVFLLAAVGLLILPLILQSFGNAWV-RIADMALLYVLLALGLNIVVGYAGLLD 59 Query: 68 LNCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMG 111 L V +AIGAY Y +L S + IW++IP +A ++G G+++G Sbjct: 60 LGYVAFFAIGAYMYGLLASPHLTETFAWIGAMFPDGLHAPIWVVIPAAAGLAGFFGLLLG 119 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 P+L+ RGDYLAI TL EI + L N G ++ L +L R Sbjct: 120 APTLRLRGDYLAIVTLGFGEIIRVFLNNLDHPVNITNGPKGMSQIDSLSFFGLNLGRTLD 179 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + YY+ L + S I L+ + + AW IR+++ A ++ K Sbjct: 180 IGGYELNSVSLYYYLFLALVLFSVLISHRLQLSRVGRAWMAIREDEIAAKAMGINTRNLK 239 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L AF + + F G++G FA+ + ISP+ F E+++++++V+LGG+ L + +L Sbjct: 240 LLAFGMGATFGGVSGTMFASFQGFISPESFSLMESVMIVAMVVLGGIGHLPGVILGAVLL 299 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + E+ + ++ ++ L+ +A+ V+L+R L L++ Sbjct: 300 SALPEVLRYVAGP-LQAMTGGRLDSSILRQLLIALAMISVMLVRPRGLWPSPEHGKSLQQ 358 >gi|291008409|ref|ZP_06566382.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 345 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 29/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +AV ++ LF G + Y + + IYV+ A L++V+G GLLSL + +G Sbjct: 12 VAVSVAVVGLLFAGGMLAGPYQTQIAVLAAIYVIMASSLNLVLGYSGLLSLGHQAYFGLG 71 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I + G+ + L + VSA+++ ++G +L+ R + IAT ++EIF+ + Sbjct: 72 AYVSAIASTALGVPMVLAVVVSAVVALVVAWLIGRVTLRLRAAFFVIATFAVAEIFRQVA 131 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W +T G G + G ++ ++ V+ + Sbjct: 132 LNWVELTGGPMGYSEIPPIGMFGYE--------------LVRPKEVFPVVFAVALFIVIA 177 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I L + + + R + +N+ ++ AF++S A +AG+ +A + +S Sbjct: 178 IARLASSGLGYSMRGLAENENLARAVGIDTSRNATIAFSLSGAMAAVAGSLYAHTVGFVS 237 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P++F F+ I + +VI GGM ++ + + E+ + Sbjct: 238 PEVFGFAIMINTLLMVIAGGMGTVLGPVIGAVLFTQLPEMLRFSDE-------------- 283 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + + L L++ L Sbjct: 284 -WRLVIYGLVLVLLVRFMPRGLWGT 307 >gi|119900021|ref|YP_935234.1| putative branched-chain amino acid transport permease [Azoarcus sp. BH72] gi|119672434|emb|CAL96348.1| putative branched-chain amino acid transport permease [Azoarcus sp. BH72] Length = 365 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 93/336 (27%), Positives = 158/336 (47%), Gaps = 5/336 (1%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L ++ L + L A + + + L+Y+M A GL++VVG GLL L + Y Sbjct: 17 LAARWLILILAIAAPLIAWQFGRSWVRILDFALLYMMLALGLNLVVGFAGLLDLGYIAFY 76 Query: 75 AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 A+GAYS+ L S + L WL++P+ A + G+ +G P L+ RGDYLAI TL E Sbjct: 77 AVGAYSFAFLASPHFDVHLPFWLILPLGAGFAALAGIALGFPVLRLRGDYLAIVTLGFGE 136 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY-VLLGM 190 I + ++ N G + + + L R R I +F+YY L Sbjct: 137 IVRIFMLNLNYPINITNGPQGINMIDPIVLFGWDLSRNIRVTEELSINSLFLYYYFFLAF 196 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 S I L+ + I AW +RD++ A ++ KL AFA+ + F G++G F Sbjct: 197 VAGSIIFIRRLQISRIGRAWAAMRDDELAAKAIGINTRNMKLLAFALGATFGGVSGCLFG 256 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + +SP+ F E+I V+++V+ GGM +++ +L + E+ + ++ Sbjct: 257 AFQGFVSPESFSLMESIAVLTMVVFGGMGNIAGALVGAFVLALLPEILRHIAVPLQQAVF 316 Query: 311 K-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + L+ +A+ L++L+R L+ R Sbjct: 317 GHVLLDPEVLRMLLLSLAMILMMLLRPAGLIPARAR 352 >gi|311108062|ref|YP_003980915.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310762751|gb|ADP18200.1| inner-membrane translocator 50 [Achromobacter xylosoxidans A8] Length = 604 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 124/303 (40%), Gaps = 25/303 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 M ++I ++ A G++++ G G +SL +AIGAY+ I +G+ + + ++ Sbjct: 33 VQMWSFVIINILLAQGINLLTGISGQISLGHAGFFAIGAYASAIAMKSWGVPFPVALVLA 92 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + A G+++ P+ + R YLA+ +L I + + + +T G G+ Sbjct: 93 TFGAAAIGLLLAGPAGRVREFYLAMMSLGFGLIVYELARELRGVTGGVMGMRGIPSSQIG 152 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + I + + +LL + + ++ ++ A+ + ++ A Sbjct: 153 TLQI----------FGWSIDTVAYFRILLVVLLVVMLMLRNFVKSHFGRAFYAVHVSEIA 202 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 SL + K +A+A+S G+AG F+A ++P+ F +I ++ + I+GG+ Sbjct: 203 AGSLGISQAAVKRAAYAISGGLAGLAGGFYAHMIGYLTPESFGLMRSIEILVMSIVGGLG 262 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 SL+ + + + N Y + + L + + L Sbjct: 263 SLAGQVYGAVLFTYLPQKLQAFNDY---------------QYIVYGLILVFIFSLLPKGL 307 Query: 340 LRL 342 L Sbjct: 308 AGL 310 >gi|153955360|ref|YP_001396125.1| hypothetical protein CKL_2742 [Clostridium kluyveri DSM 555] gi|219855779|ref|YP_002472901.1| hypothetical protein CKR_2436 [Clostridium kluyveri NBRC 12016] gi|146348218|gb|EDK34754.1| LivM [Clostridium kluyveri DSM 555] gi|219569503|dbj|BAH07487.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 324 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 145/341 (42%), Gaps = 41/341 (12%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ K + ++ L+ + +YI + I I I ++ A L+++VG G Sbjct: 1 MKRRKNILFILAAVLIVFGLIQTLISLEMIDEYIVQILIIIGINIILAVSLNMIVGYTGQ 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L+L +IG Y+ IL + +L++ +++ G+I+G+P+L+ +GDYLAI Sbjct: 61 LALGHAGFMSIGGYTAAILTLKLDAPFFLVLIAGGLMAAFFGVIIGIPTLRLKGDYLAIT 120 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL EI + ++ + G G+ + + Sbjct: 121 TLGFGEIIRIAIVNSNTL-GGAEGLAGIPKKT-------------------------SFA 154 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++ + L I +++++ A +IR+++ A S+ K+ AF +S F G+A Sbjct: 155 MVFFITILIIIIAYNIKKSSYGRAMLSIREDELASSSIGINTTKYKMIAFVTASFFAGIA 214 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G +A + P F + ++ +++ V+ GGM S+S +TAIL + E+ + Y Sbjct: 215 GVLYAHYFMFLDPKSFDYLKSFDIVTYVVFGGMGSISGCILSTAILTSLPEILRPVADY- 273 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + AL +++ R + ++ S Sbjct: 274 --------------RMVIYSAALVALMIFRPEGVFGMKEIS 300 >gi|311895445|dbj|BAJ27853.1| putative branched-chain amino acid ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 660 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 135/335 (40%), Gaps = 29/335 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----- 85 T++ + +G ILI+ A GL++VVG GLL L V +GAY+ ++ Sbjct: 322 PFTQNSETYVLIGTNILIFATVALGLNVVVGLAGLLDLGYVAFLGVGAYAAALVSGSQFS 381 Query: 86 --SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 S L + + + A+ + G+++G P+L+ RGDYLAI TL EIF+ + Sbjct: 382 VFSGVHLPFPVAVLIGALAALVFGVVIGAPTLRLRGDYLAIVTLGFGEIFRIAMNNLDGR 441 Query: 144 TN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G + + + F + + ++L + ++ + Sbjct: 442 SGPSLTNGPNGIAAIPDVNLFGFDFGQAHDFGALHLGKNGNYLLLMLVATAVVVTVFGRV 501 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + I AW IR+++ A ++ KL AFA+ + G+AGA A +SPD + Sbjct: 502 ANSRIGRAWVAIREDETAAEAMGINGFRVKLIAFALGATLAGLAGAVQAHVSGAVSPDQY 561 Query: 262 -----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + +++ VILGGM ++S A+L + + Y Sbjct: 562 LFSSPTPPNSAFLLAAVILGGMGTISGPLVGAALLFLIPAKLEFLQSY------------ 609 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +AL L++ R L+ R Sbjct: 610 ---QLLAFGVALILLMRFRPEGLIPNRRQQLEYHE 641 >gi|295705056|ref|YP_003598131.1| putative branched-chain amino acid ABC transporter permease [Bacillus megaterium DSM 319] gi|294802715|gb|ADF39781.1| putative branched-chain amino acid ABC transporter, permease protein [Bacillus megaterium DSM 319] Length = 398 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 31/352 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + V+ +LL + + + + IY+ A GL+IVVG GLL L V + Sbjct: 31 WLIAGVILIVLLPFSASQGPAYESYMEVSTLVGIYIAMALGLNIVVGLAGLLDLGFVAFF 90 Query: 75 AIGAYSYVILGSRYGLSI-------------WLLIPVSAMISGACGMIMGLPSLKFRGDY 121 A+GAY+Y I + + W I +++ G+++G+P L+ +GDY Sbjct: 91 AVGAYTYGIFATNQAANFMPFGTYPLSGESFWFFIIAGCLLAALFGILLGIPVLRVKGDY 150 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI + + N G S + ++Y Sbjct: 151 LAIVTLGFGEIIRIVFNNLDKPINITNG-----------AMGLSSVTPPSIFGINLVYPS 199 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 YYV+L + I+ + + +W+ +R+N+ A ++ ++ KL AFA+ ++F Sbjct: 200 QFYYVVLVILAAVIFIVRRFEYSKVGRSWKAVRENEIAAQAMGIHLVRTKLLAFAIGASF 259 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI-----GVVE 296 GM G FAA + + P F E+I ++ +VILGGM S+ + A++ + E Sbjct: 260 SGMMGVVFAAKQTFVDPTSFTLLESITILVMVILGGMGSVPGVILGAAVVTILNLQVLTE 319 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHT--TLMVIALFLVILMRSHSLLRLRTPS 346 L N N ++ + + + L L L RS LL + P+ Sbjct: 320 LTDWFNQLSLNGVISIPDALSPAKMQRFIFGGLLILFALYRSQGLLPAKQPT 371 >gi|86751730|ref|YP_488226.1| ABC transporter ATPase component [Rhodopseudomonas palustris HaA2] gi|86574758|gb|ABD09315.1| ABC transporter ATPase component [Rhodopseudomonas palustris HaA2] Length = 590 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 110/325 (33%), Gaps = 22/325 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L++ + L + + Y ++ I I + A GL ++ G G+ S Sbjct: 8 LVSAAIAVALLILPFSGLMPDYWITLFNYIGISSLVAIGLVLLTGVGGMTSFGQAAFVGF 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L YG+S WL +P S +++ + +G +++ G YL + T+ F + Sbjct: 68 GAYTTGVLTVYYGISPWLTLPASILVTMVAALAVGAITVRLSGHYLPLGTIAWGIAFFYL 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + G+ L +I + V+ L+ Sbjct: 128 FGNLSWL-GAHDGLPGIPALKIGDY--------------ALIAPRDYFVVVWIAVVLAVI 172 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L + A R +R + +A + AKL F ++ G+AG +A + + Sbjct: 173 ATQNLLSGRVGRAVRALRRSTRAAEAFGVNTAGAKLMVFVYAAMLAGLAGWLYAHFQRSV 232 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F + + + +LGG + A + + + F Sbjct: 233 SPGPFGITAGTEYLLMAVLGGAGRVYGAILGAAGITFLRDQLQDWLPRLLGHTGNF---- 288 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 L L++ L Sbjct: 289 ---EIIAFGAVLVLLLQTAPGGLWP 310 >gi|86749878|ref|YP_486374.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86572906|gb|ABD07463.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 411 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 126/342 (36%), Gaps = 17/342 (4%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 +L A+V L +F + + IY +FA G +I+ G G LS Sbjct: 11 ALLIGFAIVVALGPVIFTPIGAG---YPDLLQKFAIYGIFAIGFNILFGLTGYLSFGHAA 67 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 +G+Y+ V + + + S +++G + +G SL+ G Y +I TL +++ Sbjct: 68 FLGVGSYAAVWSFKLVSMDLLPAVAFSVILAGLLALAIGFISLRRSGIYFSILTLAFAQM 127 Query: 133 FQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 N+ PITNG+ G+ V + + I +Y+ + Sbjct: 128 CYNMAYSVLTPITNGETGLRVLRQDPRHLDAALGYVSPTPSLLGLPITGWTGFYICGAVL 187 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + + + + R+ R I+ NQ LSAF +S F G+AG+ AA Sbjct: 188 VAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYHTRPYLLSAFVISGMFAGLAGSLLAA 247 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + + + +++ + V+ + ILGG +L T ++ + N ++ Sbjct: 248 TDPLVGAERMQWTASGEVVLMTILGGSGTLLGPVLGTGLIKYFENIFSAYNEQQLTAVFA 307 Query: 312 F-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340 F + + V++ ++ Sbjct: 308 FLPDGVRELVVKTAGLFVGEGWQLTLGLLFMAVVIFLPGGIM 349 >gi|320011374|gb|ADW06224.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331] Length = 576 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 129/334 (38%), Gaps = 28/334 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-- 88 T++ + + ILI+ A GL+IVVG GLL L V +GAY+ ++ Sbjct: 235 PFTQTTDQFTLIAVNILIFATVALGLNIVVGLAGLLDLGYVAFLGVGAYTAALVSGTTAS 294 Query: 89 ----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 W + A +S G+++G P+L+ RGDYLAI TL EIF+ + ++ Sbjct: 295 AFDVHFPFWAAVLTGAAVSLIFGVVIGAPTLRLRGDYLAIVTLGFGEIFRITVGNLDGVS 354 Query: 145 N--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 G + L + Y ++L L + Sbjct: 355 GPQVTNGPNGVPNIPDLVFFGYDFGESHTILGIELGGYANYYLLMLLAMILVVLVFSRAG 414 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + I AW IR+++ A ++ KL AFA+ + G+AG A + + P+M+ Sbjct: 415 SSRIGRAWVAIREDETAATAMGINGFRVKLIAFALGATLAGLAGTVQAHVQSTVVPEMYV 474 Query: 263 FS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 F+ + +++ VILGGM ++S +L + + Y Sbjct: 475 FAGPVPPNSAFLLAAVILGGMGTISGPLIGATLLYMIPAKLQFLQDYQLLG--------- 525 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +AL L++ R L+ R Sbjct: 526 ------FGLALILLMRFRPEGLIANRRAQLEFHE 553 >gi|220903752|ref|YP_002479064.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868051|gb|ACL48386.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 336 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 79/329 (24%), Positives = 144/329 (43%), Gaps = 31/329 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L + + S Y + + I +Y + + L++++G G+ + +A+G Sbjct: 8 IAARVALAAVICVLPLISNAYWTDVCVSIGLYALLSLSLNVILGQAGIFHMGHAAFFAVG 67 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL + I+ +PV+ ++ +++ P + RGDYL I T+ + EI + L Sbjct: 68 AYTTAILNTLCQWPIFWTMPVAGAVAAVFALLVARPIIHLRGDYLLIVTIGIVEIVRIAL 127 Query: 138 IK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 I +T G GI+ R RF ++ I YY++ GM +S Sbjct: 128 INDVFGLTGGANGIFGISRP--------------RFFGFRIVKGIQFYYLVWGMVAVSLL 173 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L + A I+++ A + KL AF + + + GMAG +AA I Sbjct: 174 LFYGLWHSRFGRALNYIKEDDVAAEGCGINVTHYKLMAFVLGAFWAGMAGTLYAAKMTTI 233 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP+ F F E++I+ ++VIL G S + + + IG+ EL F Sbjct: 234 SPESFSFMESVIIFAVVILSG-GSQIGVLISAFLFIGLPELLR---------------EF 277 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + +A+ ++++ R LL R Sbjct: 278 SNARMLIFGLAMMVMMVWRPQGLLPPRRR 306 >gi|29832764|ref|NP_827398.1| branched-chain amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29609884|dbj|BAC73933.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 591 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 77/337 (22%), Positives = 135/337 (40%), Gaps = 29/337 (8%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--- 85 T+S + ++G+ ILI A GL+IVVG GLL L V +GAY+ ++ Sbjct: 247 IFPFTQSDDHNANLGVNILIVGTVALGLNIVVGLTGLLDLGYVAFLGVGAYAAALVSGSE 306 Query: 86 ----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + W S G+++G P+L+ RGDYLAI TL EIF+ + Sbjct: 307 FSRFAGVQFPFWAAALTGMGASLVFGVLIGAPTLRLRGDYLAIVTLGFGEIFRIAVNSLD 366 Query: 142 PITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + G R+ L +L S V ++++L + L + Sbjct: 367 GSSGPNLTNGPNGISRIPDLEIFGFNLGISHDVGSFTVGRFANYFFLMLIITALVVLVFT 426 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + I +W IR+++ A ++ KL AFA+ ++ G+AG A ++P Sbjct: 427 RASDSRIGRSWIAIREDETAATAMGINGFRVKLIAFALGASLAGLAGTVSAHVGYSVNPA 486 Query: 260 MFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++F+ + +++ V+LGGM +++ +L + E + Y Sbjct: 487 PYQFAGSVPPNSAFLLAAVVLGGMGTVNGPILGATLLYLIPEKLSFLKEY---------- 536 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 IAL L++ R ++ R Sbjct: 537 -----QLLAFGIALVLLMRFRPEGIIANRRRQLEFHE 568 >gi|290961243|ref|YP_003492425.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260650769|emb|CBG73886.1| putative ABC transporter integral membrane subunit [Streptomyces scabiei 87.22] Length = 611 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 76/330 (23%), Positives = 136/330 (41%), Gaps = 28/330 (8%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY------ 88 S ++G+ ILI+ A GL+IVVG GLL L V +GAY+ ++ Sbjct: 284 SDDQYATIGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVGAYTAAMVSGSPSSPFDI 343 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--G 146 L W + A ++ G+++G P+L+ RGDYLAI TL EIF+ ++ + Sbjct: 344 HLPFWASAILGAAVAMIFGVLIGAPTLRLRGDYLAIVTLGFGEIFRITVLNMDGTSGPDI 403 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G + L + F + + ++L + + + + I Sbjct: 404 TNGSNGISSIPNLNILGFDFGQEHTFLGFTIARFANYFLLMLLITLVVVIVFRRSSDSRI 463 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS-- 264 AW IR+++ A ++ KL AFA+ +A G+AG A ++P+ ++F+ Sbjct: 464 GRAWIAIREDETAALAMGINGFRVKLIAFALGAALAGLAGTVQAHVTYTVTPEQYQFAAV 523 Query: 265 ---ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + +++ V+LGGM ++S A+L + ++ Y Sbjct: 524 VPPNSAFLLAAVVLGGMGTISGPLVGAALLYLIPSKLQFLDDY---------------QL 568 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +AL L++ R L+ R Sbjct: 569 FAFGLALVLLMRFRPEGLIPNRRRQLEFHE 598 >gi|332531347|ref|ZP_08407255.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332039211|gb|EGI75629.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 373 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 90/319 (28%), Positives = 158/319 (49%), Gaps = 17/319 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88 + L++V+ + GL+IVVG GLL L V +A+GAY + +L S + Sbjct: 31 WVRIADMALLFVLLSLGLNIVVGYAGLLDLGFVAFFAVGAYMFGLLASPHLSDNFPTFAA 90 Query: 89 ------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + +WL+IP+SA ++G G+++G P+LK RGDYLAI TL EI + + Sbjct: 91 LFPNGVHMPLWLIIPMSAALAGIFGILLGAPTLKLRGDYLAIVTLGFGEIIRVFMNNLDH 150 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 N G ++ + SL + + F V + YY+ L + +S I L Sbjct: 151 PYNITNGPKGISQIDPIHFFGFSLGQRWDFFGYTVTPVVMYYYLFLVLVVVSVIICHRLE 210 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + I AW IR+++ A ++ KL AFA+ + F G++GA FAA + ISP+ F Sbjct: 211 LSRIGRAWMAIREDETAAKAMGINTRNMKLLAFAMGATFGGVSGAMFAAFQGFISPESFS 270 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 E+I+++++V+LGG+ L + +L + E+ + ++ ++ Sbjct: 271 LMESIMIVAMVVLGGIGHLPGVVLGAVLLASLPEMLRYVAGP-LQAMTDGRLDSSILRQL 329 Query: 323 LMVIALFLVILMRSHSLLR 341 L+ +A+ +++L+R L Sbjct: 330 LIALAMIIIMLLRPRGLWP 348 >gi|304317547|ref|YP_003852692.1| inner-membrane translocator [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779049|gb|ADL69608.1| inner-membrane translocator [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 318 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 72/339 (21%), Positives = 139/339 (41%), Gaps = 41/339 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K ++ + ++ + L + Y + + + I ++ A L+++ G G SL Sbjct: 6 KNRLLIFIGLFAIYGIIQILLSTSILNDYYEINIVLMGINIILAVSLNLINGFTGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 +IGAY+ I+ + GL L I V + +G G+++G+PSL+ +GDYLAI TL Sbjct: 66 HAGFMSIGAYTSAIITYKLGLPFPLAILVGGIAAGIAGILIGIPSLRLKGDYLAITTLGF 125 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 EI + I + + + G +G+ + + Sbjct: 126 GEIIRVIFLNTEYV-GGASGLSGIPKYTNWT-------------------------WVFW 159 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 M ++ +I ++ IR+++ A S+ F K AF + + F G+ GA + Sbjct: 160 MAVITIVLIRNFINSSYGRCCVAIREDETAAESMGINTTFYKTLAFTIGAFFAGIGGALY 219 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + I P+ F F ++ ++++V+LGG+ S++ + L V L Sbjct: 220 AHNFYIIQPETFNFMKSFDILTMVVLGGLGSITGSILSAIFLTFVYALLQDY-------- 271 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L +V+L R L+ + S Sbjct: 272 -------AALRMVIYSLLLIVVMLFRPEGLMGTKEFSLK 303 >gi|111220206|ref|YP_711000.1| high-affinity branched-chain amino acid ABC transporter membrane protein [Frankia alni ACN14a] gi|111147738|emb|CAJ59397.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Frankia alni ACN14a] Length = 491 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 85/342 (24%), Positives = 142/342 (41%), Gaps = 31/342 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ + L + + S SM I IY + A GL++VVG GLL L + +AI Sbjct: 152 IVLNLVLLAVAILAPLVVSTAAQQSMVNDIGIYALLALGLNVVVGYAGLLDLGYIAFFAI 211 Query: 77 GAYSYVILGSRYGLSI--------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 GAY+ S+ + + + P++ +++ G+I+G P+L+ RGDYLAI TL Sbjct: 212 GAYATAYFTSQTAMPWHAPFVLNPFFVFPIALVLAALAGVILGAPTLRLRGDYLAIVTLG 271 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 EI + ITNG G + L I + I + YY+LL Sbjct: 272 FGEIIHLVANNADGITNGARGAFGVPHLS---------IDLLGIDYKWGIDPLPYYYLLL 322 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + L R+ I +W IR+++ A + + KL AFA+ ++ G AG Sbjct: 323 AIVIGVMIAFGRLERSRIGRSWAAIREDEIAAEATGVATLRMKLLAFAIGASVSGFAGVL 382 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 FA+ + +P F + V+++VI GGM S + +L G+ Sbjct: 383 FASKQFF-NPQSFSLQASFFVVAVVIFGGMGSRLGVVVGAVVLQGLAFYLR--------- 432 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 D + ++++ R L+ R +E Sbjct: 433 ----DKVQPADRYIYFGAVIVIMMIFRPQGLVPSRRRRREIE 470 >gi|313673780|ref|YP_004051891.1| inner-membrane translocator [Calditerrivibrio nitroreducens DSM 19672] gi|312940536|gb|ADR19728.1| inner-membrane translocator [Calditerrivibrio nitroreducens DSM 19672] Length = 350 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 83/322 (25%), Positives = 144/322 (44%), Gaps = 15/322 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 VY L+ +FL + YI + I I + A GL+I+ G GL+SL +GA++ Sbjct: 29 VYSFLILMFLVPFHANSYILYILNMIFISSIAAVGLNILTGFTGLISLGHGAFIGVGAFA 88 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L YG++ + IP++A+ + G+I GLPSL+ + YL+IATL I + I I+ Sbjct: 89 TGYLAMNYGMNFYFAIPLAALFTAIIGIIFGLPSLRLKDLYLSIATLAAQFILEFIFIRA 148 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + T G G+ VA F Y+ + ++ Sbjct: 149 ESFTGGVNGMPVASPTIFGIEINNDFR---------------FYFFAYSFAIIMITVAKN 193 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + RT I A+ ++RDN A ++ + KL +F +SS + G+AG+ +A I+P+ Sbjct: 194 ILRTRIGRAFISVRDNYIAAEAMGVDVFKYKLLSFGISSFYAGIAGSLWAYYVQFITPEH 253 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + +I +S++I+GG+ SL T ++ + E+ + + F Sbjct: 254 FTITVSIQYLSMIIIGGLGSLLGSIFGTIFIVILPEILRHIVDLLSGAAPFLKQIFPAIR 313 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 + + L +L L R Sbjct: 314 EAFYGLVIILFLLFEPEGLARR 335 >gi|159899523|ref|YP_001545770.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779] gi|159892562|gb|ABX05642.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779] Length = 583 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 92/364 (25%), Positives = 155/364 (42%), Gaps = 28/364 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + LLAV+ ++ + L + I I I+++ A GL+IVVG GLL L + Sbjct: 197 IPLLAVIALPVILIPLIDRAGNLLLLDALIPIYIFILLALGLNIVVGYAGLLDLGYAAFF 256 Query: 75 AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AIGAY+ +L S + +S WL+I V+A ++ G+ +G P+L RGDYLAI TL E Sbjct: 257 AIGAYTTAMLSSPHLGINISFWLVIWVAAAVAAIAGLALGAPTLPLRGDYLAIVTLGFGE 316 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVR-----------SLIRFFRFPSSFVIYE 180 I + L + S + + Sbjct: 317 IVPILFRNLGGGPPTGTLTLRFFGLPIGIEQMDLTGGNKGINPISPPNLPLIGNFEPSNK 376 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 I YY+L+ + L+ I LR + AW +R+++ A ++ ++ KL AF++ + Sbjct: 377 IPWYYLLIIIMGLAIFFINRLRDSRQGRAWMAMREDELAADAMGINVVRTKLLAFSMGAM 436 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC-- 298 F G GAF+ A I P F FS +II++ +VILGG+ +++ + ++ G ++ Sbjct: 437 FSGFGGAFYGAFIGAIFPSSFDFSVSIILLCMVILGGLGNMAGVIVGGLLIQGADKMFIP 496 Query: 299 ------------CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + + L I L +++L+R LL Sbjct: 497 KGAELFRDIADQRALTTGGSTVGVSALQDLTQQRLLLFGIVLVVMMLIRPEGLLPNERRK 556 Query: 347 NFLE 350 L Sbjct: 557 AELH 560 >gi|119714483|ref|YP_921448.1| ABC transporter related [Nocardioides sp. JS614] gi|119535144|gb|ABL79761.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Nocardioides sp. JS614] Length = 565 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 114/309 (36%), Gaps = 22/309 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Q ++ A ++++VG G +S+ +G Y+ L + + Sbjct: 2 WLNYLVQAVLLASLALSVNLLVGYAGQVSVAHAAFAGVGGYTIAYLTTARDWPFVTALVA 61 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+ A G+++GL +L ++L + TL S I + + G GI L Sbjct: 62 ATLIAAAVGVVIGLIALGLAEEFLILMTLAFSLAVIGIFATFDAL-GGVMGITNVTGLSI 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 LG + + LG ++ ++ + + + IR++ Sbjct: 121 LGHEMTGPRDW--------------LVPALGTLVVTFAVCWRIGESPYGRVLKGIREDSD 166 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A SL K+ FA+++ G G ++ +P F F + V ++VI+GG Sbjct: 167 ATRSLGKNTFAYKVGIFAITAGMAGWVGGLYSGWLGLATPSAFGFPLAMSVFAMVIVGGS 226 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L A +L + +L + L L +++++R Sbjct: 227 ANLFGSVLAAGVLTLIEPTLR-------EALAMQSSQAALVQIVLYGALLVVMMILRPQG 279 Query: 339 LLRLRTPSN 347 LL R Sbjct: 280 LLAERFRHV 288 >gi|110679439|ref|YP_682446.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] gi|109455555|gb|ABG31760.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] Length = 669 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 103/312 (33%), Gaps = 26/312 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ I L I Sbjct: 380 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFIPDYTLSILLAI 439 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ M++ G+ M +++ + + TL+ + L + G + Sbjct: 440 PLAFMVTFGAGVAMERLVIRW-LYHRPLETLLATFGVSIALQQLAKNIFGTQARPLTAP- 497 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V + A + ++RT + R + N Sbjct: 498 --------GWLDGSWVINDIVSISYIRIAIFFLALMFLALFLFVMKRTRLGLEVRAVTQN 549 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + S+ + F S G+AG S ++ V++G Sbjct: 550 PRMAASMGINPDRINMLTFGFGSGIAGIAGVAIGLYSKVTSEMGSEYIVQS--FMTVVVG 607 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ ++ + + +N S + T M++ + L I R Sbjct: 608 GVGNIWGTLLGATMVGTLQKGIEWLNP-----------SNTLAAQTYMILFIILFIQFRP 656 Query: 337 HSLLRLRTPSNF 348 ++ L+ + Sbjct: 657 RGIIALKGRAAE 668 >gi|309790179|ref|ZP_07684751.1| inner-membrane translocator [Oscillochloris trichoides DG6] gi|308227764|gb|EFO81420.1| inner-membrane translocator [Oscillochloris trichoides DG6] Length = 361 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 1/329 (0%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + ++ + L +Y ++ I I + A GL+I+VG G +S+ Sbjct: 17 RPYWPMRIRIILIIAIMLLFPWFGNRYWLNLVNTIGIAAIGAIGLNILVGFTGQISIGHA 76 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 A+GAY+ +L + GL +W+ IP++ +++ G + G+PS++ +G YLAIATL E Sbjct: 77 GFMAVGAYTTGLLAAHAGLPMWISIPIACIVAAGVGALFGMPSVRLKGLYLAIATLAAQE 136 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I L K I G A + + F + Y+V++ Sbjct: 137 IIIWFLTKGDKIVQMATGDRRAVFFGESLSIPPAANNVFGIALKGNN-DFNFYWVIITCL 195 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ L R+ A IRD A + + KL AFA SS G+AGA A Sbjct: 196 VLTVLFASNLFRSRAGRAMVAIRDQDIAAQVIGVDLFKYKLLAFATSSFIAGLAGALMAH 255 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 R IS + F +I+ +S++I+GG+ S+S A + + L ++ + Sbjct: 256 YRGIISWERFTIDISILYLSMIIIGGLGSVSGSIYGAAFMTILPALLSNISRAASGVMPA 315 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLL 340 F +A+ L ++ ++ Sbjct: 316 FANYLPYIQQGAFGLAIILFLIFEPEGIV 344 >gi|256829191|ref|YP_003157919.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256578367|gb|ACU89503.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 332 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 127/323 (39%), Gaps = 29/323 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V + + + Y + I I + GL++ +G G +SL + +G Sbjct: 18 LFVSLMAMALILFPYIEDNPYTLGLTNLIAINAIVVLGLNLFIGYAGQISLGHAAFFGLG 77 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I +GL W + + A + G + +G+P L+ G YLA+ATL ++ + +L Sbjct: 78 AYGSAIATVTFGLPPWPAMFLIAALVGLVSLAVGIPVLRLSGHYLAMATLGLNYVVHTVL 137 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 ++W +T G +G L + ++Y+L G + Sbjct: 138 LQWDEVTGGPSGFAGIPSLSVADVVFDD--------------PVSLHYLLWGFTMACLLL 183 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L R+ + + ++ A SL AK+ F +S+ +AG+ FA +S Sbjct: 184 CLNLVRSGVGRGLAALAGDETAAASLGVDTRAAKVKVFVLSAVLASLAGSLFAHCYSYVS 243 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD F + ++ +V++GGM S+ A L + E + Y Sbjct: 244 PDTFGIFTSTDLVIMVVVGGMGSIWGSVFGAAFLTLLPEWMEVFDTY------------- 290 Query: 318 MRHTTLMVIALFLVILMRSHSLL 340 + L LV++ L+ Sbjct: 291 --KDFVHGGILVLVLMFLPQGLI 311 >gi|291301244|ref|YP_003512522.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728] gi|290570464|gb|ADD43429.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728] Length = 372 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 78/365 (21%), Positives = 152/365 (41%), Gaps = 51/365 (13%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSM-----------------GIQILIY 49 R + A + +L+ + ++ Y+ + + I+ Sbjct: 23 RRWRSLSWYWRAAAIVAVLVLFYSLPILNEYYVFPINYLSTDAVSGGTAFDDALVLTSIW 82 Query: 50 VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-----LSIWLLIPVSAMISG 104 V+ A GL++V+G GLL L + +A+GAY+ I GS L+P+ ++ Sbjct: 83 VLVAVGLNVVIGMAGLLDLGYIGFFAVGAYTVAIFGSPTSEVATAYPWLALVPIGIALAM 142 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 G+I+G+P+L+ RGDYLAI T+ EI + + + +TNG+ GI + Sbjct: 143 VSGVILGIPTLRLRGDYLAIVTMGFGEIIRIVAVN-TDVTNGQQGIQNIPKPP------- 194 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 V+ MY++ L + + + L + + AW +R+++ A + Sbjct: 195 ------GSLFENVLDSRPMYWLCLTIVVICIFGVARLENSRVGRAWLAVREDEDAAGIMG 248 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 K+ AFA+ +A G++G +A+ I+ D F +I+ +++V+LGG + + + Sbjct: 249 VPAFKFKIWAFAIGAAVGGLSGVLYASKEGVINSDSFPLQTSILFVAMVVLGGQGNTAGV 308 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ + E + L +AL +V++ R +L Sbjct: 309 ILGAIVVAYLPERLRFVAD---------------WREVLFGVALVVVMIFRPQGILPSSR 353 Query: 345 PSNFL 349 S L Sbjct: 354 RSAEL 358 >gi|218781782|ref|YP_002433100.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218763166|gb|ACL05632.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 354 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 69/344 (20%), Positives = 138/344 (40%), Gaps = 32/344 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + + + + Y + + +Y + A L++++G G+ + YAIGA Sbjct: 12 IIYAVVAVVWIVSPLFLDNYQTDVLNTVGLYAILALSLNVILGYGGMFHMGHAAFYAIGA 71 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL +++G+ +P++ +++G +I+ P + RGDYL I T+ M EI + +I Sbjct: 72 YTTAILSTQFGVPTMWTMPIAGILAGVFALIVARPIIHLRGDYLLIVTIGMVEIVRIAII 131 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSL-----------------IRFFRFPSSFVIYEI 181 + K L + F F + ++ Sbjct: 132 NDAVSSAAKFLNKGFMLLGIQDWALCEKIANASTGGPNGIFGVAAPSIFGFEINGIVNTT 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 ++++ + + L R+ A R + ++ A KLSAF + + + Sbjct: 192 HYFFLITAFLAATILLFFLLERSRYGRALRYLCSDEIAAEGSGVNTSGYKLSAFVIGAFW 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 GMAG FA ISP F F+E++ + IVILGG + + +++G+ E+ Sbjct: 252 AGMAGTLFAGKITFISPTSFTFAESVTLFMIVILGGSGYIPGVILGALLVVGLPEIFQ-- 309 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + I L +++++R ++ + P Sbjct: 310 -------------DFQKWRMLVFGIVLVIMMVLRPQGIMPPKPP 340 >gi|134101412|ref|YP_001107073.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133914035|emb|CAM04148.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 342 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 29/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +AV ++ LF G + Y + + IYV+ A L++V+G GLLSL + +G Sbjct: 9 VAVSVAVVGLLFAGGMLAGPYQTQIAVLAAIYVIMASSLNLVLGYSGLLSLGHQAYFGLG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I + G+ + L + VSA+++ ++G +L+ R + IAT ++EIF+ + Sbjct: 69 AYVSAIASTALGVPMVLAVVVSAVVALVVAWLIGRVTLRLRAAFFVIATFAVAEIFRQVA 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W +T G G + G ++ ++ V+ + Sbjct: 129 LNWVELTGGPMGYSEIPPIGMFGYE--------------LVRPKEVFPVVFAVALFIVIA 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I L + + + R + +N+ ++ AF++S A +AG+ +A + +S Sbjct: 175 IARLASSGLGYSMRGLAENENLARAVGIDTSRNATIAFSLSGAMAAVAGSLYAHTVGFVS 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P++F F+ I + +VI GGM ++ + + E+ + Sbjct: 235 PEVFGFAIMINTLLMVIAGGMGTVLGPVIGAVLFTQLPEMLRFSDE-------------- 280 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + + L L++ L Sbjct: 281 -WRLVIYGLVLVLLVRFMPRGLWGT 304 >gi|298292601|ref|YP_003694540.1| inner-membrane translocator [Starkeya novella DSM 506] gi|296929112|gb|ADH89921.1| inner-membrane translocator [Starkeya novella DSM 506] Length = 391 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 141/327 (43%), Gaps = 19/327 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L ++ ++ F + Y + + ++Y + A L+ +GS + + +Y I Sbjct: 78 LALLLGIAIVLAFPFVLEGNTYALHLCVISMLYAVLALALNFQLGSANIPNFATGASYGI 137 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L +G+S WL +PV+A+++ G ++G+PS++ R YLA+ T+ + + Sbjct: 138 GAYASALLALNFGISFWLALPVAAVVATIFGFLLGIPSMRTRDSYLALVTIAFGVVIHQL 197 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L + T G G+ G + S + F + + YY+ + +S Sbjct: 198 LNNLE-FTGGPNGLVGIPAPELFGHSFASPLVIFGQE---LPSQANFYYLSALLVLISIV 253 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L + + AW +R ++ A + + K+ AFAV + G AG +A I Sbjct: 254 FARRLHDSRVGLAWNALRTDELAARCQGINVTWYKVLAFAVDAFLAGFAGTIYAFYVGFI 313 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SPD F F ++ ++++VI GGM ++ + +L + E + Y Sbjct: 314 SPDNFTFLVSVTIMTMVIAGGMDNILGVIVGAFLLTLLPEKLRAFSDY------------ 361 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343 + + + +++R L R Sbjct: 362 ---RILFFGVTVIVFLMIRPQGLFPQR 385 >gi|116748281|ref|YP_844968.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116697345|gb|ABK16533.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 318 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 79/322 (24%), Positives = 141/322 (43%), Gaps = 30/322 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 + Y + + IY + L+++VG GL +L YA+GAY+ IL Sbjct: 12 AVLFACLPLFLNAYWIDVLNSVGIYAILGLSLNLIVGHTGLFNLGHAAFYAVGAYTAAIL 71 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPI 143 +++ + + LLIPV +G +++ P + RGDYL I T+ + EI + LI I Sbjct: 72 NTKFQVPVLLLIPVCGFAAGLFALVVSKPIIHLRGDYLCIVTIGVGEIVRIALINDVFGI 131 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 T G GI+ R G +R+ + +Y++ ++ + L R Sbjct: 132 TGGSNGIFGISRPSLFGFVIRT--------------PLEFFYLIWAFAAITVLLFHLLER 177 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 + A +R+++ A KL++F + +A+ GM G FAA ISPD F F Sbjct: 178 SRFGRALNYLREDEVAAEGSGINTAHYKLASFVIGAAWAGMTGNLFAAKMTIISPDSFTF 237 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 E++++ +IVILGG S+ + +++G+ E+ + Sbjct: 238 WESVVMFAIVILGGSGSIPGVLVGAFLIVGLPEVFREF---------------ANARMLV 282 Query: 324 MVIALFLVILMRSHSLLRLRTP 345 A+ ++++ R+ LL R Sbjct: 283 FGAAMMVMMVFRTQGLLPARPR 304 >gi|212716440|ref|ZP_03324568.1| hypothetical protein BIFCAT_01364 [Bifidobacterium catenulatum DSM 16992] gi|212660693|gb|EEB21268.1| hypothetical protein BIFCAT_01364 [Bifidobacterium catenulatum DSM 16992] Length = 386 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 79/341 (23%), Positives = 140/341 (41%), Gaps = 42/341 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + VV +L + + YI + + I I ++ L++ +G LG L+L C A Sbjct: 16 AIGVVVLFGILMGVCESGMASAYIKGIMMTICIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75 Query: 76 IGAYSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 IGAYS + + L L V +I+ G+++G+P+L+ GDYLAI T Sbjct: 76 IGAYSAALLSKLLVANGVAMDPTLRFLLTTLVGGVIACIFGILVGIPALRLHGDYLAIIT 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ K L + + I + YV Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIDRLANLYV 177 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++ ++ R+ A + IRD++ A + I + K+ FA+S+ F G+AG Sbjct: 178 VFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAASASGINITYMKVLVFAISAFFAGIAG 237 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA ++P M + ++I + +V+ GGM SL+ + L + EL + Y Sbjct: 238 GIFAQYIGSLNPSMAGWLQSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFSTY-- 295 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL L+++ R + S Sbjct: 296 -------------RMLVYSVALVLIMIFRPQGIFGNWEFSL 323 >gi|294499667|ref|YP_003563367.1| putative branched-chain amino acid ABC transporter permease [Bacillus megaterium QM B1551] gi|294349604|gb|ADE69933.1| putative branched-chain amino acid ABC transporter, permease protein [Bacillus megaterium QM B1551] Length = 399 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 89/352 (25%), Positives = 151/352 (42%), Gaps = 31/352 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + V+ +LL + + + + IY+ A GL+IVVG GLL L V + Sbjct: 31 WLIAGVILIVLLPFSASQGPAYESYMEVSTLVGIYIAMALGLNIVVGLAGLLDLGFVAFF 90 Query: 75 AIGAYSYVILGSRYGLSI-------------WLLIPVSAMISGACGMIMGLPSLKFRGDY 121 A+GAY+Y I + + W I +I+ G+++G+P L+ +GDY Sbjct: 91 AVGAYTYGIFATNQAANFMPFGTYPLSGESFWFFIIAGCLIAALFGVLLGIPVLRVKGDY 150 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI + + N G S + ++Y Sbjct: 151 LAIVTLGFGEIIRIVFNNLDKPINITNG-----------AMGLSSVTPPSIFGINLVYPS 199 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 YYV+L + I+ + + +W+ +R+N+ A ++ ++ KL AFA+ ++F Sbjct: 200 QFYYVVLVILGAVIFIVRRFEYSKVGRSWKAVRENEIAAQAMGIHLVRTKLLAFAIGASF 259 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI-----GVVE 296 GM G FAA + + P F E+I ++ +VILGGM S+ + A++ + E Sbjct: 260 SGMMGVVFAAKQTFVDPTSFTLLESITILVMVILGGMGSVPGVILGAAVVTILNLQVLTE 319 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHT--TLMVIALFLVILMRSHSLLRLRTPS 346 L N N ++ + + + L L L RS LL + P+ Sbjct: 320 LTDWFNQLSLNGVISIPDALSPAKMQRFIFGGLLILFALYRSQGLLPAKQPT 371 >gi|302387309|ref|YP_003823131.1| inner-membrane translocator [Clostridium saccharolyticum WM1] gi|302197937|gb|ADL05508.1| inner-membrane translocator [Clostridium saccharolyticum WM1] Length = 367 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 61/341 (17%), Positives = 117/341 (34%), Gaps = 4/341 (1%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 ++K + +V LL + Y S+ + IY + A ++++ G GL S Sbjct: 6 VSKNKLYTLIALLVIIGLLAFLQANSSLYSYQISILERSAIYAVVAVSMNLLTGFTGLFS 65 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY+ IL + I+ A + L L A + Sbjct: 66 LGQAGFMAIGAYTVAILTIPVDSR--ASVYYVGGIAPAIANLHCPYWLALILAGLLAAAM 123 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + +K + G R + ++ I +V Sbjct: 124 AALIGIPVLRLKSDYLAIATLGFSEIIRAVIAAPQLDTITN--GSYGLKSIPGFPNLFVA 181 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G+C L +++ L ++ A++ +R+++ A ++ + K AF +SS F G+ G Sbjct: 182 FGLCALCILLMILLINSSYGRAFKALREDEVAAQAMGLNLFRYKELAFVISSFFTGVGGG 241 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A I F + ++ IV+LGG+ S++ ++ E + Sbjct: 242 LLAIFMRSIDSKTFSINLTYDILLIVVLGGIGSITGSVIGAFLVTAGREWLRFFDNPLVI 301 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + I L V+L ++ S Sbjct: 302 GGFEVPLFRTGFRMVIFSILLMAVVLFYRRGIMGSNEFSWE 342 >gi|303248570|ref|ZP_07334826.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] gi|302490011|gb|EFL49933.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] Length = 323 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 126/325 (38%), Gaps = 29/325 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ L+L L + Y S+ I + + A GL++++G G +SL Y I Sbjct: 10 IVQAGLFLVLLLAVPYLLPNDYYLSICILGCLSAIIAVGLNLLMGYAGQISLGHAAFYGI 69 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY I +R+GL I + + ++ +M P LK +G YLA+ATL I + Sbjct: 70 GAYVTAICTTRFGLPIPVGMAAGVALAMVVAWVMAAPILKLKGHYLAMATLGFGIIVAIV 129 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + +T G +G RL LG S Y ++ + L Sbjct: 130 FNEAVDLTGGPSGYVGIPRLSLLGFDFDSDR--------------SYYNLVAVVLSLVVL 175 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L L R+ A R + ++KA SL I K F +S+ G+AG +A I Sbjct: 176 VSLNLMRSRTGRALRALHVSEKAAASLGVDIAAHKRFVFVLSAGLAGLAGVLYAHYLSFI 235 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P F F ++ ++ +V+LGGM ++ L + E Sbjct: 236 APASFGFGVSVQLVVMVVLGGMANVWGSVVGALFLTALPEALREFED------------- 282 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + L L I+ L Sbjct: 283 --IDILVYGAILVLTIMYLPDGLTG 305 >gi|23664431|gb|AAN39368.1| ABC-transporter [Azoarcus evansii] Length = 572 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 65/322 (20%), Positives = 129/322 (40%), Gaps = 26/322 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++ + + M ++LI +FA L ++VG GL+S + I AY+ Sbjct: 11 LAVMAGVLAFPAFGSDFYAEMVAKVLILAIFAMSLDLLVGFTGLVSFGHAAYFGIAAYAV 70 Query: 82 VILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 ++ +Y ++WL +P S + + A ++GL L+ +G Y + TL +++ + Sbjct: 71 ALMTPKYDPANLWLALPASILAAAAAAFVIGLFVLRTKGIYFIMVTLAFAQMAYYVFHD- 129 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 P+ G GI + + + +YY ++ ++ Sbjct: 130 TPLGGGSDGI---------YLNFKPDATIAGWVPFDLNEPHHLYYFVVAAMLAVYGLLKL 180 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + R+ IR N+ SL KL+AF ++ G AG +A ++P+ Sbjct: 181 VLRSPFGRVLVGIRSNEHRMLSLGYATFRYKLAAFTLAGGLAGFAGFLYAVLFGFVTPEY 240 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + ++ V+ +VILGGM +L+ A L+G+ E+ GM ++ Sbjct: 241 LSWHKSGDVLLMVILGGMGNLAGAIAGAAALVGLQEIFTGMTKHW--------------- 285 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 LM + + +L + Sbjct: 286 QLLMGLTIVAAVLFMPGGMAAT 307 >gi|332284983|ref|YP_004416894.1| putative branched-chain amino acid transport system protein [Pusillimonas sp. T7-7] gi|330428936|gb|AEC20270.1| putative branched-chain amino acid transport system protein [Pusillimonas sp. T7-7] Length = 617 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 111/307 (36%), Gaps = 22/307 (7%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + ++ + I + + GL ++ G G+ S IGAY+ +L + G S W+ Sbjct: 22 TPEFWITHLNYIGLSSLVVLGLILLTGIGGMTSFGQAAFVGIGAYTTAVLTTDAGWSPWV 81 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 + + +I+ I+G +L+ G YL + T+ S + + GI Sbjct: 82 TLFIGLLITFVVAYILGAITLRLSGHYLPLGTIAWSLSLYYLFGNLGFL-GQYDGIAGIA 140 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + G ++ + +YY++ LS L + A R ++ Sbjct: 141 PIDIFGFSLGNGRH--------------IYYLIWVFVLLSMWATRNLLDSRPGRAIRALK 186 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 S + K+ F ++ ++G +A + +SP F + +I + + + Sbjct: 187 SGGGMAESFGIHMAGYKVIVFVYAALLASVSGWLYAHMQRAVSPSPFGLNYSIEYLFMAV 246 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG S+ +++ + + + ++ F + + + LV+ Sbjct: 247 VGGAGSVWGAVAGAGLILTLKDQLQNVLPKILDTTSNF-------ELIVFGVLMILVLQY 299 Query: 335 RSHSLLR 341 + Sbjct: 300 ARDGVWP 306 >gi|90423452|ref|YP_531822.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90105466|gb|ABD87503.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 411 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 64/346 (18%), Positives = 129/346 (37%), Gaps = 15/346 (4%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 +K+ I L+ + L + Y + + IY +FA G +I+ G G LS Sbjct: 5 SKFADIALLIGFAIVVALGPVIFTPIGAGY-PDLLQKFAIYGVFAIGFNILFGLTGYLSF 63 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +G+Y+ V + + + S +++G + +G SL+ G Y +I TL Sbjct: 64 GHAAFLGVGSYAAVWSFKLVSMDLLPAVAFSVVLAGVLALAIGFISLRRSGIYFSILTLA 123 Query: 129 MSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +++ N+ PITNG+ G+ V + + + I +Y+ Sbjct: 124 FAQMCYNMAYSVLTPITNGETGLRVLRQDPRHLDAMFGYVSPTPSLLGLPITGWTGFYIC 183 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + + + + R+ R I+ NQ LSAF +S F G+AG+ Sbjct: 184 GAVLVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYHTRPYLLSAFVISGMFAGLAGS 243 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA+ + + +++ + V+ + ILGG +L T ++ + N Sbjct: 244 LLAATDPLVGAERMQWTASGEVVLMTILGGAGTLLGPVLGTGLIKYFENIFSAYNEPQLT 303 Query: 308 SLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340 ++ F + + V++ ++ Sbjct: 304 AVFAFLPDGVRELVVKTAGLFVGEGWQLTLGLLFMAVVIFLPGGIM 349 >gi|91976837|ref|YP_569496.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91683293|gb|ABE39595.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 325 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 131/340 (38%), Gaps = 29/340 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I L++ +L+ L + +Y + I + GL+ G GL+SL Sbjct: 1 MAIRNALSIAAAILVIGGLLSAVLPEYYLRLLNLSAISAVAVIGLNFAFGYAGLISLGHA 60 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +GAY IL G S WL P + + ++G P L+ RG YLA+ATL ++ Sbjct: 61 AFVGMGAYGLAILTVTSGWSPWLAAPAAIAATAVLAALIGYPLLRLRGHYLALATLGLNV 120 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F + W +T G GI L TV RF ++ L + Sbjct: 121 SFYIVTSNWIDLTGGTNGIARIPELTIGTLTVAGEHRF--------------LWLALVVL 166 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + A++ L + +RD++ A + K++AF +S+ +AG FA Sbjct: 167 AIVAALAAILHGSRHGREMMAVRDDEIASEMIGIDTTRVKITAFVLSAVCAAIAGCLFAL 226 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ++P+ F ++ +I ++++I+GG +++ +L + E + Sbjct: 227 HVRFVAPEDFTYAHSITYLAMLIVGGESTIVGAILGAILLTFLPEWLRFL---------- 276 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + +++ L+ L + Sbjct: 277 -----GTAYLFFFGLLMLCILVFLPTGLVGLGQRLRRSRK 311 >gi|313902801|ref|ZP_07836198.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter subterraneus DSM 13965] gi|313466921|gb|EFR62438.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter subterraneus DSM 13965] Length = 362 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 74/345 (21%), Positives = 138/345 (40%), Gaps = 23/345 (6%) Query: 5 SLRLNKYDKILCLLAVVYPLLLF---LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 LR + ++ + +++ L L +Y+ + Q IYV+ A L++++G Sbjct: 12 PLRATPWPVVIGRWLLQLAVIVGIYELLLAWVGGNRYLLVVLTQAGIYVILAVSLNLILG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G LS+ A+G Y+ IL + + + A+ +GA G+++G+PSL+ RGDY Sbjct: 72 YTGQLSIGHAGFMAVGGYAAAILTKFFSVPFPAALLAGAVAAGAAGLLVGIPSLRLRGDY 131 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAIATL EI +L + G +I I Sbjct: 132 LAIATLGFGEIISVLLSLINEVPVG-----------------DRVIDVGGAQGLIGIPRH 174 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + + L+ ++ + A IR+++ A ++ K+ AF +S+ Sbjct: 175 TTFAWTYLVAVLAIKVVWHFVHSTHGRACIAIREDEVAAEAMGIPSTRYKVLAFTISAML 234 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AG +A ++P + F ++ ++ IV++GGM S + A + Sbjct: 235 AGVAGGLYAHQYLYLNPAVAGFMNSVFILVIVVIGGMGSTTGAVAAAVFFTYTNQAL--- 291 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + L L + L +V+L+R LL + Sbjct: 292 PNWMQALHLPPSIDPPAVRMVLFSVLLIVVMLVRPRGLLGGVELT 336 >gi|330836092|ref|YP_004410733.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374] gi|329747995|gb|AEC01351.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374] Length = 333 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 73/335 (21%), Positives = 145/335 (43%), Gaps = 29/335 (8%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + + ++ ++ + + +Y+ + I L+Y M A L+++ G LG + Sbjct: 4 RFSTWLVRHKSPLLIGTVIAAVIFPYVFTSRYVLRIAILCLMYCMLAVSLNLMSGILGQI 63 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S + IGAY+ IL +G + ++ V+A+++G G+++ LP + +G Y I T Sbjct: 64 SFGHAAFWGIGAYTAAILAKNHGWNNVGVLIVAALVAGLFGLLLSLPVMHLKGYYFTITT 123 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 ++ +I + I I W +TNG GI +L G ++S YY+ Sbjct: 124 MVFCQIVRVIEINWMSLTNGPLGIMAIPKLQIFGQLIKSQQ--------------AYYYL 169 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + L+ I+ + + A +RD+ A ++ + K+ A +SS G AG Sbjct: 170 ILILLSLTTFIVHKVIHARMGYAILAVRDDDLAAGAMGIHVFKYKVLAIVISSMLAGAAG 229 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 F++ I P F + + ++ +VI GG+ ++ +L + E+ G + Y Sbjct: 230 GFYSVYTSYIDPGSFTNAVSNNMLVMVIFGGLGNIFGSFVGATLLTVLPEVLRGFSEY-- 287 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L L++L+R + Sbjct: 288 -------------RQLVFGALLVLLMLVRPEGIFG 309 >gi|239627688|ref|ZP_04670719.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517834|gb|EEQ57700.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 371 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 62/341 (18%), Positives = 120/341 (35%), Gaps = 4/341 (1%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + NK + V +L T Y S+ + IY + A ++++ G GL Sbjct: 4 MTKNKNKVYTIIALAVLIGILAFLQSDTAEYSYQISILERSAIYAVVAVSMNLLTGFTGL 63 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 SL AIGAY I G + + IS + + LA A Sbjct: 64 FSLGQAGFMAIGAYVVAIFTIPVGSR--ASVYYVSGISPVIANVALPIPVALLLGGLAAA 121 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 L + +K + G R + ++ I + Sbjct: 122 VLAALIGIPVLRLKSDYLAIATLGFSEIIRAFIAAPMFDTVTN--GSYGLKSIPGFPNIF 179 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + G+ L ++++ L ++ ++ IR+++ A S+ + K +F +SS F G+ Sbjct: 180 AVFGLAALCIALMVLLINSSYGRVFKAIREDEIAAQSMGLNLFRYKELSFVISSFFTGVG 239 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G A I F+ + ++ IV+LGG+ S++ ++ EL + Sbjct: 240 GGMLAMFMRSIDSKTFQVALTYDLLLIVVLGGIGSVTGSVLGAFLVTSGRELLRFFDDPL 299 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + + + I L +V+L ++ S Sbjct: 300 TIAGVHIPLFRSGFRMVIFSILLMVVVLFYRRGIMGNNEFS 340 >gi|308233571|ref|ZP_07664308.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Atopobium vaginae DSM 15829] gi|328943976|ref|ZP_08241441.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Atopobium vaginae DSM 15829] gi|327491945|gb|EGF23719.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Atopobium vaginae DSM 15829] Length = 378 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 68/332 (20%), Positives = 124/332 (37%), Gaps = 19/332 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL V+ L + + +Y S+ QI IY++ A L++V G LG L L ++ Sbjct: 41 LLIVIVIALGQFLISSAFISRYQISVLEQIGIYIIMAVSLNLVTGYLGQLPLGHAGFMSV 100 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y+ I + ++ L ++S + LA A + + Sbjct: 101 GGYAGAIFIMKCAEALHLAPRAFVLLSPVAVA---IFIGGVVIGGLAAALCGLIIGIPAL 157 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV-LLGMCFLSA 195 +K + G R+ + F ++ + ++ Sbjct: 158 RLKGDYLAIITLGFAEIIRVVMQNFDDTFNVTLTGGAKGLTGIPSFTNFINTSVLVVITI 217 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +I L ++ A IRDN+ A + +I K +AF +S+ F G+AG +A Sbjct: 218 FVIHTLMKSRWGRAIYAIRDNEIAAEASGISITMYKTTAFVLSAFFAGVAGVLYAGCIGV 277 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P F F +++ ++ +V+LGGM S+ + L + EL G + Y Sbjct: 278 LAPAKFGFMKSVEILVMVVLGGMGSMLGSILSATTLTVLPELLRGFSDY----------- 326 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L LV++ R L S Sbjct: 327 ----RMIAYSVVLILVMIFRPKGLFGSYDFSL 354 >gi|298528276|ref|ZP_07015680.1| inner-membrane translocator [Desulfonatronospira thiodismutans ASO3-1] gi|298511928|gb|EFI35830.1| inner-membrane translocator [Desulfonatronospira thiodismutans ASO3-1] Length = 320 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 135/322 (41%), Gaps = 30/322 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V + + Y + I +Y + A L+ +VG GL + +A+GAY+ Sbjct: 10 VVAFTVVILACPFFLDAYWIDVINNIGLYAVLALSLNFIVGYTGLFHMGHAAFFAVGAYA 69 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK- 139 IL + Y + I LL+PVS + + ++ P + RGDYL I T+ + EI + L+ Sbjct: 70 TGILNTSYDIPIVLLLPVSGLAAALFAYLVARPIIHLRGDYLLIVTIAIVEIVRIALVND 129 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 +T G GI+ R F +R+ +F +Y + LS + Sbjct: 130 IFGLTGGSNGIFGISRPDFYFFDIRTPHQF--------------FYYIWAFLALSVLLFY 175 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L ++ A I++++ A + KL+AF + + + GM G +A+ ISP Sbjct: 176 NLEKSRYVRALNYIKNDEVAAEGSGVNVDHLKLTAFVLGAFWAGMVGNIYASKMTLISPA 235 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F F E++I+ IVILGG S+ + ++IG+ E+ Sbjct: 236 SFNFWESVILFVIVILGGSGSIRGVILGAFLIIGLPEIFRQFAG---------------A 280 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 + A+ +++ R L Sbjct: 281 RMLVFGGAMVAMMVFRPQGFLP 302 >gi|148654792|ref|YP_001274997.1| inner-membrane translocator [Roseiflexus sp. RS-1] gi|148566902|gb|ABQ89047.1| inner-membrane translocator [Roseiflexus sp. RS-1] Length = 352 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 80/320 (25%), Positives = 146/320 (45%), Gaps = 10/320 (3%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + +L+ + + + +Y ++ I I + A GL+I+VG G +S+ A+GAY+ Sbjct: 26 IAVVLIAVLIFPWFADRYWLNLANTIAIAAIGAIGLNILVGYTGQISIGHGGFLAVGAYT 85 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L R + +W+ IPV+++ + G GLPS + +G YLAIATL EI +L Sbjct: 86 AGLLAVRLDMPMWITIPVASLFTALVGAFFGLPSARLKGLYLAIATLASQEIIIWLLTHG 145 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 K + G++ L + F ++ + Y++ +G L+A + Sbjct: 146 KLLGIGES----------LSLPPATNNLFGVPLNALGNNDFVFYWITVGFLALTAVFVSN 195 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R+ A+ IRD A + I KL AFA SS F G+AGA A R IS + Sbjct: 196 LFRSRTGRAFVAIRDQDIAAQVIGVDIFRYKLLAFATSSFFAGLAGALTAHYRGVISWER 255 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F +I+ ++++I+GG+ S+S A ++ + + + + + Sbjct: 256 FTIDTSILYLAMIIIGGLGSVSGSIYGAAFMVLLPAMLANLARSVSGVVPDINSYLPFIQ 315 Query: 321 TTLMVIALFLVILMRSHSLL 340 +A+ L ++ ++ Sbjct: 316 QGAFGLAIILFLIFEPEGIV 335 >gi|116749114|ref|YP_845801.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116698178|gb|ABK17366.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 317 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 67/319 (21%), Positives = 131/319 (41%), Gaps = 29/319 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + +L+ +G + S Y + I I + A GL++++G G +SL Y +GAY+ Sbjct: 4 AFFVLVIAVVGLSVSNAYHFQLLTFIGINTLLALGLNMLMGYAGQISLGHAAFYGLGAYA 63 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 IL S WL +PV+ +++ ++ LP L+ G YL + TL I I +W Sbjct: 64 TAILTVHLNWSPWLALPVAVVLTVVIAFLVALPMLRLSGFYLGMGTLGFGMIGYIIFREW 123 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 T G +G+ L + S +Y++ + + + Sbjct: 124 SRFTGGDSGLVGIPSLELGPISFASARN--------------YFYLVWAVVLVCLLLCER 169 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + + R I D+++A ++ K+ F +S+ F +AG +A + ISP Sbjct: 170 LVDSRVGRGLRAIHDSEQAAAAMGIDTSRLKIQIFVLSAVFAALAGFLYAHLVNFISPGS 229 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F ++ ++++V++GGM S+ ++L + E Sbjct: 230 FDFLVSVRIVTMVVIGGMASIWGSLLGASLLTVLPEFLQAFADS---------------E 274 Query: 321 TTLMVIALFLVILMRSHSL 339 + + L ++++ L Sbjct: 275 MIVYGLILMVIMIFLPQGL 293 >gi|149914806|ref|ZP_01903336.1| branched-chain amino acid ABC transporter permease [Roseobacter sp. AzwK-3b] gi|149811599|gb|EDM71434.1| branched-chain amino acid ABC transporter permease [Roseobacter sp. AzwK-3b] Length = 318 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 74/324 (22%), Positives = 135/324 (41%), Gaps = 27/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L+ F+ L S KY + I L +V+ A G +++ G G +S+ IG Sbjct: 8 ILWMVALVGFILLPQLISVKYYLHLAILALCWVIAAQGQNLIQGYTGYVSIVQAGFMGIG 67 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS ++G Y L +WL I ++ ++ + G PSL+ +G Y A+ TL + + +L Sbjct: 68 AYSTALMGLHYDLPVWLTILLAPCVTAVFAVFTGYPSLRVKGHYFAVVTLAFNLVIFIVL 127 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W +T G+AGI + R YY +L + L + Sbjct: 128 MNWHDLTQGEAGITGIPKPGGKDGLFNWRDRE------------TYYYFVLIIAALMTGL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + R+ I IR N+ +L KL AF S+ + G+AGA +A + I+ Sbjct: 176 AALIVRSRIGQNLIAIRQNEDLVGALGIPAWKYKLFAFVTSAMYAGLAGAVYAHYQSFIN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P++F ++++ I VI+GG +++ ++ + E + Sbjct: 236 PEIFGVAQSLDAILAVIIGGSGTIAGPVIGAFFVVFLPEYLRF---------------AD 280 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 L + L L + ++ Sbjct: 281 SFRLILYGLVLVLATIFMPRGIVG 304 >gi|300309520|ref|YP_003773612.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300072305|gb|ADJ61704.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 404 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 98/377 (25%), Positives = 171/377 (45%), Gaps = 40/377 (10%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ N + LL ++ +++F F+ ++ + L+Y+M A GL++VVG Sbjct: 6 FDMKRNPQQARISLLLLLALMIVFPFVAQQFGNSWV-RIMDVALLYIMLALGLNVVVGFA 64 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRY--------------------------------GLS 91 GLL L + YAIGAYS +L S LS Sbjct: 65 GLLDLGYIAFYAIGAYSAGLLASPQFAAVIESFVNTYPSVGNFLVWLCGPEIVQNGIHLS 124 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW---KPITNGKA 148 +WL++P+SA ++ G ++G P+LK RGDYLAI TL EI + + ITNG Sbjct: 125 LWLIVPISAFLAALFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNAPVNITNGPQ 184 Query: 149 GIYVADRLYFLGTTVRSLIRFFRF---PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 GI + D + G ++ + Y++ L +C + L+ + Sbjct: 185 GINLIDPIKVFGVSLAGEPGSGSMVKVFGMSMPSVNAYYFLFLLLCIGVIFFSVRLQDSR 244 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + AW IR+++ A ++ KL AFA+ ++F G+AGA F A + +SP+ F +E Sbjct: 245 LGRAWVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGAMFGAFQGFVSPESFSLTE 304 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLM 324 +I V+++V+LGG+ + + IL + E+ + ++ + L Sbjct: 305 SIAVLAMVVLGGIGHIPGVVLGGVILAALPEVLRHVVEPVQMAIFGKVWIDAEVLRQLLY 364 Query: 325 VIALFLVILMRSHSLLR 341 +A+ +++L R L Sbjct: 365 GLAMVVIMLTRPAGLWP 381 >gi|222479574|ref|YP_002565811.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] gi|222452476|gb|ACM56741.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] Length = 393 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 131/353 (37%), Gaps = 23/353 (6%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +L + LL L Y + +Y + ++GL+ G GL++ + Sbjct: 19 AWVLGVSVAFMLFLLGALLTGALGPTYFLFLVGLAGMYALLSFGLNAQWGFTGLINFSVA 78 Query: 72 IAYAIGAYSYVILGSRYG-----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + IGAY ++ + + + + V+ + + +++G+P+L+ R DYLAIA+ Sbjct: 79 AFFGIGAYGSALMTASGSPIAGGFNPIVGLVVALVAAFVLALLIGIPTLRLRADYLAIAS 138 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE------ 180 L ++E+ + I++ + +TNG AG+ + + + VI Sbjct: 139 LGLAEVVRLIVLNERWLTNGSAGLRGIPGFFKGWPVLSTFPETMPGLRLVVIPGSPVILE 198 Query: 181 ------IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + ++L + ++ ++ RTIR ++ +L K+ + Sbjct: 199 TAFWQALLNVLLVLSFAGAAYFVLRRAHQSPWGRVLRTIRSDEDLARALGKNTYSFKMQS 258 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F + S + +AG F+ + P VILGG S +++ + Sbjct: 259 FILGSLIMALAGVFYTHLNLYVGPGDLDPITTFYAWVAVILGGSGSNRGALFGGIVIVTI 318 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 E +N + L+ + + V+ R +L + Sbjct: 319 REGTRFLND------VALPIDPAPLRLLLIGVVIVAVMRYRPQGILPPQRELI 365 >gi|311109566|ref|YP_003982419.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310764255|gb|ADP19704.1| inner-membrane translocator 69 [Achromobacter xylosoxidans A8] Length = 590 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 130/325 (40%), Gaps = 30/325 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V A Y + +Y + A G++++VG G SL +A G Sbjct: 8 LITVALAAALAAFAALVDNDYYLRIVFMACVYYLCAAGVNVLVGYAGQKSLGQAGLFAAG 67 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L SR+ + WL + + +++G G+++ LPSL+ +G YLA+ TL + + I+ Sbjct: 68 AYTAALLTSRWQVDPWLALAAAPVVAGVFGVLIALPSLRVKGPYLAMVTLAFGIVMEKIV 127 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W + G +G++ L + G + + L +C + + Sbjct: 128 TEWVDVFGGPSGLFGIMPLTWGGNAFTNQQW---------------VWFALVLCVATQLL 172 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + A +++ ++ A S+ + AK+ AF V++ G+AGA A I+ Sbjct: 173 LRNVLDGRFGRALLSVQADEIASSSVGVRVYRAKVIAFVVAAVTCGIAGALVAQQNQYIN 232 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 D F+ +I ++ +V+ GG S + A L + L + Sbjct: 233 SDFIGFNLSIFILLLVLFGGAGSKAGPAVGAIALTIIDALLAR---------------WP 277 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 L + ++ L Sbjct: 278 SVQHFFYGALLLFALYFMPGGVMGL 302 >gi|153815310|ref|ZP_01967978.1| hypothetical protein RUMTOR_01544 [Ruminococcus torques ATCC 27756] gi|317501668|ref|ZP_07959859.1| hypothetical protein HMPREF1026_01803 [Lachnospiraceae bacterium 8_1_57FAA] gi|331088449|ref|ZP_08337364.1| hypothetical protein HMPREF1025_00947 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847372|gb|EDK24290.1| hypothetical protein RUMTOR_01544 [Ruminococcus torques ATCC 27756] gi|316896919|gb|EFV18999.1| hypothetical protein HMPREF1026_01803 [Lachnospiraceae bacterium 8_1_57FAA] gi|330408216|gb|EGG87704.1| hypothetical protein HMPREF1025_00947 [Lachnospiraceae bacterium 3_1_46FAA] Length = 355 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 141/337 (41%), Gaps = 24/337 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + K + I L + +++ + A ++ + + + IY++ A L++VVG LG L Sbjct: 9 KTTKNNIITYALVIAAFVIMQSLINAGSISSLLEGLMVPLCIYIIMAVSLNLVVGVLGEL 68 Query: 67 SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL +GA++ +L + + + G+++G+P L+ +G Sbjct: 69 SLGHAGFMCVGAFASAFFSKCMRDTIESASLRFFLALLIGIAAAAIFGILIGIPVLRLKG 128 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +N++ + + + L + Sbjct: 129 DYLAIVTLAFGEIIKNLVNVLYIGKDSNGFHFSTKDVMALNMEPDGKVIINGPQGITGTP 188 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + +++ + ++ I+L L + A IRDN+ A S+ I KL AF +S+ Sbjct: 189 KDATFFIGFILILITLFIVLNLIHSRDGRAIMAIRDNRIAAESVGINITKYKLMAFTISA 248 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAILIGVVEL 297 A G AG +A + ++ + F N I+++ V+LGG+ ++ A IL + E+ Sbjct: 249 AMAGAAGVLYAHNLSTLTANTNNFGYNMSIMILVFVVLGGIGNIRGSIIAAVILTLLPEM 308 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 G++ Y + I L +++L Sbjct: 309 LRGLSDY---------------RMLIYAIVLIVMMLF 330 >gi|15806057|ref|NP_294760.1| branched-chain amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6458767|gb|AAF10611.1|AE001955_3 branched-chain amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 471 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 147/350 (42%), Gaps = 22/350 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V ++F+ + + IQ+LI+ A GL+IVVG GLL L + +A+GA Sbjct: 77 LVYALGIVFVLPYMGQHNTSYFDLVIQMLIFAALALGLNIVVGLAGLLDLGYIAFFAVGA 136 Query: 79 YSYVILGSRYGLS---------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 Y + I GS WL IP++ + G+++GLP LK +GDYLA Sbjct: 137 YLWGIFGSPQFGEITGNAAFAAGVNPALFWLFIPLAVAAAALVGVLIGLPVLKLKGDYLA 196 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 I TL + E+ + G D + I S F+ Sbjct: 197 IVTLGLGEVIRIFANNL----GVTNGPQGIDAIQSAPVPWLDNIAKSLGFSEDQYRLFFL 252 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y ++L + + + L R+ I +W IR+++ A ++ ++ KL AFA ++F G Sbjct: 253 YLLVLVVIGIVVVVNQRLDRSKIGRSWIAIREDEVAAQAMGVPLLRTKLLAFATGASFAG 312 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 G FAA + I P F + ++I V+S+VILGGM +++ + ++ + + Sbjct: 313 AMGVIFAAKQAFIDPKSFDYFQSIGVLSMVILGGMGNIAGVMVGAVVVTLLNLMVLPTIS 372 Query: 304 YYFNSLLK---FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + + + L ++L R L+ + Sbjct: 373 EVMQAQFPNINQNLDPSKYQRLIFGLVLVFMMLYRPEGLVPSERRKAEMH 422 >gi|27382009|ref|NP_773538.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27355179|dbj|BAC52163.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 554 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 73/312 (23%), Positives = 131/312 (41%), Gaps = 29/312 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 Y+ I + M A L++V G++G +SL AIGAY+ +L + + Sbjct: 271 PLFPVSFYVLQTLINAWLLGMLALSLTLVAGTIGQVSLGHAALLAIGAYTSALLSLSFAV 330 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + L I ++S A G + PS + RG Y++IATL + EI +++ W+ +T G GI Sbjct: 331 PVGLAIIGGGLMSAALGTALISPSFRLRGHYVSIATLAIGEIVSLVILNWESVTRGPIGI 390 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L G ++ +Y+ L + + A + L + + ++ Sbjct: 391 SGIPPLSLFGYD--------------LVSPSSVYWFSLAVMVVLALLQARLLGSHLGRSF 436 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R IRD+ A + ++ K AF G++G A I+ + F ++I+ + Sbjct: 437 RAIRDDDIAARAYGLSLNRYKSLAFIFGGFAAGVSGGIAAHLYSYINHETFNTQQSILAL 496 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++VILGG+ ++ + L+G+ EL Y + I L L Sbjct: 497 TVVILGGLGNVVGAIVGSVALVGLPELFRIAAEY---------------RILIYGIVLLL 541 Query: 331 VILMRSHSLLRL 342 ++ R LL Sbjct: 542 LVRFRPQGLLGT 553 Score = 52.6 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 19/171 (11%), Positives = 53/171 (30%), Gaps = 1/171 (0%) Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + S + RF + + + ++LR + + A R Sbjct: 61 FSPNPRALPSQLPDVRFQIGGGTIGPLDLLIAGVGITSALLLFVFLRYSKLGWAVRATAQ 120 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + + F +++A G++G ++I + + ++ Sbjct: 121 DRDAAMQMGVDVNRVNQAVFGIAAALGGVSGMLVGMYYNQID-TAMSLQATLKGVVAEVV 179 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 GG ++ + +L V + + +L F + + Sbjct: 180 GGAGNVPGAVIGSLLLGLVESYGVAVFGTSYRNLFAFLLLVVVLVLRPNGL 230 >gi|163846659|ref|YP_001634703.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl] gi|222524461|ref|YP_002568932.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl] gi|163667948|gb|ABY34314.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl] gi|222448340|gb|ACM52606.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl] Length = 352 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 84/320 (26%), Positives = 141/320 (44%), Gaps = 10/320 (3%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + +L+ + + + +Y ++ I I + A GL+I+VG G +S+ A+GAY+ Sbjct: 26 IVLVLVAVLIFPWFADRYWLNLANTIAIAAIGAIGLNILVGYTGQISIGHGGFLAVGAYT 85 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L G +WL IP+++ + A G GLPSL+ +G YLAIATL EI +L Sbjct: 86 AGLLAVHLGTPMWLTIPIASFFTAAVGAFFGLPSLRLKGLYLAIATLASQEIIIWLLTHG 145 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 K + G++ L + F + Y+V L L+ + Sbjct: 146 KLLGIGES----------LSLPRATNNLFGLPMEWLGNNDFAFYWVCLAFLILTVIFVSN 195 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L RT A+ IRD A + + KL AFA SS F G+AGA A R IS + Sbjct: 196 LFRTRTGRAFVAIRDQDIAAQVIGVDLFRYKLLAFATSSFFAGLAGALTAHYRGVISWER 255 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F +I+ ++++I+GG+ S+S A +I + M + + Sbjct: 256 FTIETSILYLAMIIIGGLGSVSGSIYGAAFMILLPAFLSNMARTLSGVVPDINSYLPYIQ 315 Query: 321 TTLMVIALFLVILMRSHSLL 340 +A+ L ++ ++ Sbjct: 316 QGAFGLAIILFLIFEPEGIV 335 >gi|319652083|ref|ZP_08006203.1| hypothetical protein HMPREF1013_02815 [Bacillus sp. 2_A_57_CT2] gi|317396231|gb|EFV76949.1| hypothetical protein HMPREF1013_02815 [Bacillus sp. 2_A_57_CT2] Length = 347 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 137/320 (42%), Gaps = 15/320 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V+ LL + + YI + I + A GL+I+ G G +S+ +G Y+ Sbjct: 26 VFILLAVFAVFPMLASDYIIGLATLCGIAAIGAIGLNILTGFTGQISIGVGAFLGVGGYT 85 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 IL ++ GLS W+ +P + +++ G + GLPSL+ +G YLAIATL I ++ +W Sbjct: 86 SAILTAKLGLSFWIAMPTAGIVTAIVGGLFGLPSLRLKGLYLAIATLAAQVIILFVISRW 145 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G AG+ ++ YY++ + ++A+ L Sbjct: 146 DALTGGTAGMVLSRPELGSFVFYSERSY---------------YYLMFTVLIITAAFTLN 190 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R+ + A+ +RD A + + K+ AF VSS F+G+AGA +SP++ Sbjct: 191 LFRSRVGRAFIAVRDRDVAAEVMGIDLFKYKVLAFIVSSFFVGIAGALLGHYTMVVSPEL 250 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + + +I ++I+++GG+ S+ + + + Sbjct: 251 YSITVSIEYLAIILVGGLGSVFGSIYGAVFITLLPVVLRSGVEMMSGVFPDLSAVLIGMK 310 Query: 321 TTLMVIALFLVILMRSHSLL 340 + + + L ++ L Sbjct: 311 EVVFGLVIILFLIYEPQGLA 330 >gi|303247275|ref|ZP_07333549.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] gi|302491434|gb|EFL51322.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] Length = 348 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 88/320 (27%), Positives = 149/320 (46%), Gaps = 8/320 (2%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V + Y+ + + I++Y++ A GL+I+ G GLL L V Y IGAY+ Sbjct: 11 VIAAAALAYPLMPFRDVYVLHVLVLIMVYMVLAMGLNILPGFCGLLDLGFVGFYGIGAYT 70 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L Y +S WL++P++A+ G+++G+P+L+ GDY AI T SE+ L Sbjct: 71 AGLLTIHYNMSFWLIVPLAALNGAFFGIMLGVPTLRLVGDYFAIVTFGFSELVVLFLTNE 130 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G G+ + T + SL+ E+ YY+ + M ++ Sbjct: 131 IWLTRGPLGVPGIAPVDINFTWLASLLGVDGRWRYAFRGEVPYYYLGIVMVLFVYLVMRR 190 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + + AW IR++ A S ++ K+ AFAVS+ MAG+FFA ISPDM Sbjct: 191 LEDSRLGRAWLAIREDSMAAASCGVNLLVYKVIAFAVSAGIGAMAGSFFARWTLFISPDM 250 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 FKF E+ +V+ +V+LGG+ +++ ILI + E+ + Sbjct: 251 FKFWESFLVLCMVVLGGLGNINGALVGAIILIALGEVLRVVLPKLG--------LPAETR 302 Query: 321 TTLMVIALFLVILMRSHSLL 340 + + L++ R + Sbjct: 303 FLAYGLIMVLIMRYRPGGIF 322 >gi|196232614|ref|ZP_03131466.1| urea ABC transporter, permease protein UrtC [Chthoniobacter flavus Ellin428] gi|196223376|gb|EDY17894.1| urea ABC transporter, permease protein UrtC [Chthoniobacter flavus Ellin428] Length = 904 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 97/355 (27%), Gaps = 38/355 (10%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + L+A++ + L + + ++ + L Y + A + ++ G GLLSL Sbjct: 533 LGLATLIALILIVALPALNASGAVSNFTINLWGKYLCYGLLAISVDLLWGYTGLLSLGQS 592 Query: 72 IAYAIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + +++G Y + + LL + P F Sbjct: 593 LFFSLGGYMLGMNLMLMIGKDGQYYKSGNNPNLLPDFMVFLGHTFLPSFWRPFYSFPVAV 652 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF--------------LGTTVRSLI 167 L + + ++ G + L + Sbjct: 653 LMVIAVPGLLALIFGFFGFRSRIKGVYFSILTQALTYAAYIFLLQNDVTMGGNNGFTDFK 712 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 R + + +Y + WL T R IRD++ Sbjct: 713 RILGYNLREPATQRGLYIATALLLVAVYVFARWLTTTKFGLVQRAIRDSETRVLFSGYAA 772 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 KL F V+ + GA + I+P +++ + +GG ++ Sbjct: 773 ANYKLFIFVVAGIIAALGGALYVPQVGIINPSELATDKSLEAVVWCAVGGRGTIVGPIIG 832 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + ++ + L++L ++ L Sbjct: 833 AIGVNALKSWATT--------------KYPDYWLIILGVLFILIVLFMPKGIVGL 873 Score = 54.1 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 70/222 (31%), Gaps = 19/222 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I ++ A GL+I G +G++++ A+GAY+ ++ + + L IP+ Sbjct: 199 LSTGSILLVAAIGLAITFGLMGVINMAHGELIAVGAYTTYVIQGLFATGVVLQIPLFFTQ 258 Query: 103 SGACGMIMGLPSLKFRGDYLAIA----------------TLIMSEIFQNILIKWKPITNG 146 + Y IA ++ +++ L Sbjct: 259 PYTLRLSGLGLQGSKLDFYFLIALPMSFIVAALVGILLERCVIRFLYRRPLESLLATWGV 318 Query: 147 KAGIYVADRLYFLGTTVRSLIRFF---RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 + RL F V+ + + S + ++ +V+ + L L R Sbjct: 319 SLVLQQLFRLTFGANNVQVYSPAYLSGNWTISDITFDWNRVFVIGFAVVIIIGTHLLLTR 378 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 T++ R + N+ + + F S G Sbjct: 379 TSLGLLIRAVVQNRTMAACMGVKTERVNMLTFGFGSGPRGPG 420 >gi|316935607|ref|YP_004110589.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315603321|gb|ADU45856.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 357 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 69/343 (20%), Positives = 145/343 (42%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF R ++ IL ++ V + Y S+ IQI I+ + A GL+I+VG Sbjct: 21 TIFPTRTSRNAAILGIVLVCFA--------PFVLTGYWLSILIQIGIFGIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +S+ + +GAY+ L + + + ++ IP++ +I+ G++ GLP+ + +G Y Sbjct: 73 FTGQISIGHAAFFLLGAYTSAYLNNHFPIPVFFAIPLAGVITALVGLVFGLPAARLKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L IATL I + + + T G F Sbjct: 133 LVIATLAAQYILIDFFSRAEWFTGGSVPAMANPFSLFGYELRGDKQY------------- 179 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +YV+L +S ++ L R+ A +RD+ + + + + +F +++ F Sbjct: 180 --FYVVLAYLLVSYILVTNLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFF 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+ GA + + +S + F +I+ ++++I+GG+ S+S TA ++ + E + Sbjct: 238 AGIGGALYGHYQMVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPETMEWL 297 Query: 302 NFYYFNS----LLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + L+ + + + + + ++ L Sbjct: 298 SEALKGGAIDRALQLNTNLTFLREIAIGLIIIAFLVFEPDGLA 340 >gi|121606097|ref|YP_983426.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120595066|gb|ABM38505.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 370 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 17/311 (5%) Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSA 100 +IVVG GLL L V +A+GAY + +LGS + L IW IP +A Sbjct: 49 NIVVGYAGLLDLGYVAFFAVGAYMFALLGSPHLAEAFPWIAANFPEGLHLPIWATIPAAA 108 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++G G+++G P+LK RGDYLAI TL EI + L N G ++ + Sbjct: 109 ALAGLFGVLLGAPTLKLRGDYLAIVTLGFGEIIRVFLNNLDRPINLTNGPKGISQIDSMK 168 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 L + F YY+ L + S + L+ + I AW IR+++ A Sbjct: 169 FFGFDLGKSHTFFGIEFTSVSMYYYLFLALVIFSVILCHRLQNSRIGRAWMAIREDEIAA 228 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ KL AF + + F G++G+ FA+ + +SP+ F E+++++++V+LGG+ Sbjct: 229 KAMGINTRNMKLLAFGMGATFGGVSGSMFASFQGFVSPESFSLMESVMIVAMVVLGGIGH 288 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + +L + E+ + ++ ++ L+ +A+ V+LMR L Sbjct: 289 LPGVILGALLLAALPEVLRHVAGP-LQAMTDGRLDSSILRQLLIALAMITVMLMRPRGLW 347 Query: 341 RLRTPSNFLER 351 L + Sbjct: 348 PSAEHGKSLNK 358 >gi|226944690|ref|YP_002799763.1| ABC-transporter permease [Azotobacter vinelandii DJ] gi|226719617|gb|ACO78788.1| Bacterial ABC-transporter, permease protein [Azotobacter vinelandii DJ] Length = 424 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 97/322 (30%), Positives = 153/322 (47%), Gaps = 22/322 (6%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + KY+ ++ I LIYV+ GL+IVVG GLL L V YAIGAY + GL Sbjct: 108 FPFFAGKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYEYLGL 167 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W ++P++A+++ G ++G P L+ GDYLAI TL EI + +L W T G G+ Sbjct: 168 GFWSVLPLAALMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGM 227 Query: 151 YVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 V + R FF + + +F+Y VLL L + L R Sbjct: 228 SVPAPTFLGLEFGRRARDGGVPFHEFFGIAYNPNLKFLFIYVVLLLTVLLVLYVKGRLVR 287 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 I AW +R+++ A ++ + KLSAF + ++ G+AG FFA+ + ++P F F Sbjct: 288 MPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASYQGFVNPTSFTF 347 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 E+ ++++IV+LGGM S + A +L EL Y L Sbjct: 348 FESALILAIVVLGGMGSTLGVVLAAFMLTVAPELLRSFADY---------------RVLL 392 Query: 324 MVIALFLVILMRSHSLLRLRTP 345 + + L+++ R L+R+ Sbjct: 393 FGMLMVLMMIWRPRGLIRISRR 414 >gi|154496291|ref|ZP_02034987.1| hypothetical protein BACCAP_00578 [Bacteroides capillosus ATCC 29799] gi|150274374|gb|EDN01451.1| hypothetical protein BACCAP_00578 [Bacteroides capillosus ATCC 29799] Length = 361 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 83/342 (24%), Positives = 146/342 (42%), Gaps = 22/342 (6%) Query: 1 MSIFSLRLNKY--DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSI 58 M S R + + I + + +++ + + + S I I YV+ A L++ Sbjct: 1 MKTVSTRRRRLVSNSITYGIVIAAYVIIQILMAGDNLSNSLQSQLIPICAYVVMAVALNL 60 Query: 59 VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-------LLIPVSAMISGACGMIMG 111 VVG G LSL ++GA+S VI + +I + + V A+ +G G I+G Sbjct: 61 VVGISGELSLGHAGFMSVGAFSGVIAATCLQNTIPSDALRLAVSMVVGAICAGVAGFIVG 120 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 +P L+ RGDYLAI TL EI +NI+ + + + LG Sbjct: 121 VPVLRLRGDYLAIVTLAFGEIIKNIINVLYIGLDEEGLHLSLESEAALGLGEGGKAILSG 180 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + I +I + + ++ +++L L + A +RDN+ A S+ K Sbjct: 181 PMGATGINKISSFTAGFILVLITITVVLNLVNSRSGRAIMAMRDNRIAAESVGIGATKYK 240 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L AF S+ G AG +A + ++ F F+ +I+++ V+LGG+ ++ A A L Sbjct: 241 LMAFVTSAVLAGAAGTLYAMNYSSVTAKKFDFNTSILILVFVVLGGIGNIRGSIIAAAFL 300 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 + EL +N + + I L LV++ Sbjct: 301 TVLPELLRSLN-------------LDKYRMLVYAIVLILVMI 329 >gi|46198907|ref|YP_004574.1| branched-chain amino acid transport system permease protein livM/branched-chain amino acid transport ATP-binding protein livG [Thermus thermophilus HB27] gi|46196531|gb|AAS80947.1| branched-chain amino acid transport system permease protein livM/branched-chain amino acid transport ATP-binding protein livG [Thermus thermophilus HB27] Length = 585 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 110/304 (36%), Gaps = 21/304 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ I + A L ++ G G+ S + AY+ +L +R G+S W + + Sbjct: 22 YLTLLNFFAIAALVALSLYVLTGLGGMTSFAQAAFMGVAAYATALLTTRAGVSPWAGLAL 81 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ A +++GL +++ +G +L ++T+ + +T G G+ L Sbjct: 82 GLGLTLAFALVLGLLTVRLKGHFLPLSTIAWQVALYILAGNLVGLTGGHTGLTDLPALAL 141 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G + S R+ + + + LR + + A +R + Sbjct: 142 FGLPLDSPFRYAFLSLFLLALLVLA--------------LHNLRESRLGRALLALRGDAL 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 S +L AF ++ G+AG +A ++P F +I + + + GG+ Sbjct: 188 TAASFGVDPAALRLKAFLLAGGIAGLAGFLYAHFLRFVNPTPFSLEASIKYLVMAVAGGV 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ + A+ G+ + + T + L ++L Sbjct: 248 GTIPGVVLGAALFTGLEDWLKDLLPLLLGRQ-------GNYETIAYGLVLAGILLFAPQG 300 Query: 339 LLRL 342 L L Sbjct: 301 LWPL 304 >gi|239905544|ref|YP_002952283.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239795408|dbj|BAH74397.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 348 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 78/339 (23%), Positives = 139/339 (41%), Gaps = 24/339 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +F R K L A+ KY+ S+ I I V+ A L+++ G Sbjct: 17 QLFPSRFQKIALALFFAALCLA--------PWAMNKYLVSILCLINISVIGAVSLNLLTG 68 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 S G +SL + +GAY+ L GL L +P + +++ GM+ GLPSL+ +G Y Sbjct: 69 SCGQISLGHGAFFGVGAYTAAYLA-NLGLPFVLALPGAGLVTALTGMVFGLPSLRLKGIY 127 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAIATL I + + + W +T G G+ + L Sbjct: 128 LAIATLAAQLILEYVFLHWDAVTGGSGGMALDAPSIAGFAFDTDLKM------------- 174 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +Y+ LG+ L + + RT + A+ IRD + + + KL AF +SS Sbjct: 175 --FYLTLGVAVLCVLAVSNVMRTRLGRAFVAIRDYHLSAEIVGVDLFAYKLRAFGLSSFL 232 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+ GA +A+ I+P+ F ++ ++++I+GG+ S+ + + E + Sbjct: 233 AGVGGALWASYTMYITPEQFGIGLSVSYLAMIIIGGLGSVIGGVFGAVFITILPECLNFL 292 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + + + + L L ++ L Sbjct: 293 AQHAGAAFTDLSGALLAMKEGVFGLVLVLFLIFEPEGLA 331 >gi|148558530|ref|YP_001257384.1| branched-chain amino acid ABC transporter permease/ATP-binding protein [Brucella ovis ATCC 25840] gi|148369815|gb|ABQ62687.1| branched-chain amino acid ABC transporter, permease/ATP-binding protein [Brucella ovis ATCC 25840] Length = 609 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 22 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ G+S W + + A I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 82 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + ++GG+ +++ +L+ + E L F Sbjct: 247 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321 >gi|162456886|ref|YP_001619253.1| putative ABC transport protein, permease component [Sorangium cellulosum 'So ce 56'] gi|161167468|emb|CAN98773.1| putative ABC transport protein, permease component [Sorangium cellulosum 'So ce 56'] Length = 416 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 129/337 (38%), Gaps = 27/337 (8%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + + ++ V+ A L+++ G G S+ IGAY+ ++ Sbjct: 23 FGFETLLPDAAWRQLALFAMVNVIAALSLNVINGMAGQFSIGHAGFVGIGAYTGAVVAGN 82 Query: 88 YGLS--------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 + + S +++ G+++GLPSL+ RGDYLAI TL +EIF Sbjct: 83 LHQHLGGGDPLFGNSFVVMPAALLASGLVAALFGLVVGLPSLRLRGDYLAIVTLGFAEIF 142 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + L T G + P + + + + G L Sbjct: 143 R--LTIATATTGGPD-----QGALGKLLGALGGPIGYAGPDDTGVPQYAGPFWIFGAVVL 195 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS- 252 + + L+ + A R +R+++ A ++ K+++F +S+A G+AGA ++ Sbjct: 196 ATILAWRLKFSGWGRALRALREDEIASAAVGVDPTRYKVTSFVISAAGGGIAGALLSSMR 255 Query: 253 --RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG---VVELCCGMNFYYFN 307 + PD F F+ + I++VILGG S+S + ++E G++ Sbjct: 256 DGNPTVQPDQFTFNYSFDAITMVILGGSGSVSGAILGGVFVTFTVKLIEQLQGLDSVLAL 315 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 N L L ++++R L R Sbjct: 316 KAAYPALDLNALRMVLYAAILIGLMVLRPEGLFGERE 352 >gi|156740562|ref|YP_001430691.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941] gi|156231890|gb|ABU56673.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941] Length = 352 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 10/320 (3%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + +L+ + + +Y ++ I I + A GL+I+VG G +S+ A+GAY+ Sbjct: 26 IALVLIAVLTFPWFADRYWLNLANTIAIAAIGAIGLNILVGYTGQISIGHGGFLAVGAYT 85 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L +R +W+ IPV++ + G GLPS++ +G YLAIATL EI +L Sbjct: 86 AGLLAARLDAPMWVTIPVASGFTALVGAFFGLPSVRLKGLYLAIATLAAQEIIIWLLTHG 145 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 K + G++ L + F S+ + Y+V +G L+ + Sbjct: 146 KLLGIGES----------LTLPQAANNLFGFPLSALGNNDFAFYWVTVGFLILTVVFVSN 195 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R+ A+ IRD A + + KL AFA SS F G+AGA A R IS + Sbjct: 196 LFRSRTGRAFVAIRDQDIAAQVIGVDLFRYKLLAFATSSFFAGLAGALTAHYRSIISWER 255 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F +I+ ++++I+GG+ S+S A + + L + + + Sbjct: 256 FTIDTSILYLAMIIIGGLGSVSGSIYGAAFMTLLPALLSNLARAISGVVPDINTYLPYIQ 315 Query: 321 TTLMVIALFLVILMRSHSLL 340 +A+ L ++ ++ Sbjct: 316 QGAFGLAIVLFLIFEPEGIV 335 >gi|317154713|ref|YP_004122761.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] gi|316944964|gb|ADU64015.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] Length = 396 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 98/315 (31%), Positives = 153/315 (48%), Gaps = 29/315 (9%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + +Y + + I +LIY+ GL+IVVG GLL L + Y +GAY+Y +L +G Sbjct: 102 IYPQFAGRYGNDVAISVLIYICLGLGLNIVVGLAGLLDLGYIAFYGVGAYAYALLSLHFG 161 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 LS W +PV+A+++ G I+G P+L+ RGDYLAI TL EI + IL W +TNG G Sbjct: 162 LSFWACLPVAALLAAISGCIIGYPTLRMRGDYLAIVTLGFGEIVRLILNNWMSLTNGPNG 221 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 I R G S +YYV+LG+ + + L + I A Sbjct: 222 ILAIPRPELFGFGFAS--------------LSSLYYVILGIAVFTVLAVYRLNFSRIGRA 267 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 W IR+++ A + KL A+A+ + F G+AGAFFAA + P+ F F E+ +V Sbjct: 268 WEAIREDETAAELMGVNTFLLKLLAYAMGATFAGLAGAFFAARMRFVGPESFTFLESAMV 327 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +++V+LGGM S+ + L+ + EL Y + + Sbjct: 328 LAMVVLGGMGSIPGVILGVLALVALPELFRDFELY---------------RMLVFGGVMC 372 Query: 330 LVILMRSHSLLRLRT 344 ++L+R L + Sbjct: 373 TMMLIRPAGLWPAKR 387 >gi|260219963|emb|CBA27026.1| hypothetical protein Csp_A00220 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 389 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 137/320 (42%), Gaps = 20/320 (6%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L++ L +Y + +LIY + GL ++ G G SL +GAY+ Sbjct: 58 ALVVLLVAAPWLLTEYSLAQLNLVLIYAIAGLGLMLLAGFTGQFSLGHAAFLGVGAYAQA 117 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + + +S +S G+++GLP+L+ +G YL +ATL I + + +W+ Sbjct: 118 YFTNAGVP-FVVSLALSGTLSALMGIVVGLPALRLKGIYLGMATLSFGFIIEEVFARWES 176 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G AG + + + Y+V L + L IL L Sbjct: 177 VTGGNAGK---------------AVGVIKMAGYELGSGQGFYFVCLTVTVLCTLGILNLL 221 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ A+ IRD++ + S+ + + K +F++S+A GMAGA +A + ISPD F Sbjct: 222 RSPTGRAFVAIRDSEISAQSMGIHLAYYKTLSFSISAALAGMAGALYAHNLRFISPDQFN 281 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 ++I ++ ++++GG+ S+ + LI + + + L +F + Sbjct: 282 LLQSIDLLLMIVIGGLGSVHGVFLGAIFLIILPQGISAGKEF----LPEFIGQAPGLKSV 337 Query: 323 LMVIALFLVILMRSHSLLRL 342 + L +L L Sbjct: 338 IYGSVLIAFVLFEPMGLYGR 357 >gi|27381076|ref|NP_772605.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354242|dbj|BAC51230.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 357 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 68/343 (19%), Positives = 145/343 (42%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF ++ I+ +L + Y S+ IQI I+ + A GL+I+VG Sbjct: 21 TIFPTATSRNFAIVGVLLLCLV--------PQFLGGYWLSILIQIGIFSIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +S+ + +GA++ + + + ++ IP++ +++ G++ G+P+ + +G Y Sbjct: 73 FTGQISIGHAAFFLLGAFTSAYISNNAPIPVFFAIPLAGVVTALVGLVFGIPAARLKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L IATL I + + + T G V + F + + Sbjct: 133 LVIATLAAQYILLDFFSRAEWFTGGS---------------VPASANPFSIFGFTLRGDK 177 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +YV+L S ++ L RT A IRD+ + + + + +F +++ F Sbjct: 178 QYFYVVLAYVLASYILVTNLMRTRDGRALVAIRDHYLSAEIMGINLTKYRTLSFGLAAFF 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA +A + +S + F +I+ ++++I+GG S+ TA ++ + E + Sbjct: 238 AGIAGALYAHYQLVVSQEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPESMEFL 297 Query: 302 NFYYFNS----LLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + Y L + + + + + ++ L Sbjct: 298 SIYLKGGAIDKALSLNNNITFLREIAIGVIIIAFLMFEPDGLA 340 >gi|254712221|ref|ZP_05174032.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella ceti M644/93/1] gi|254715292|ref|ZP_05177103.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella ceti M13/05/1] gi|261217020|ref|ZP_05931301.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261319890|ref|ZP_05959087.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260922109|gb|EEX88677.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261292580|gb|EEX96076.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 609 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 22 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ G+S W + + A I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 82 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + ++GG+ +++ +L+ + E L F Sbjct: 247 PAAMFSLAFSIQIAIFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321 >gi|189424922|ref|YP_001952099.1| inner-membrane translocator [Geobacter lovleyi SZ] gi|189421181|gb|ACD95579.1| inner-membrane translocator [Geobacter lovleyi SZ] Length = 321 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 132/320 (41%), Gaps = 29/320 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + L S Y+ ++ + + I+ M A L++++G G +SL + +GAY Sbjct: 10 VFAICILLAPLAFSGNYLMNVLVFVGIHTMLAVALNLLLGYAGQISLGHAAFFGLGAYGS 69 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 IL + Y + WL + V A++ G +G P LK +G YLA+ATL M I + +W Sbjct: 70 GILSTTYEWNPWLAMTVVALVVGGLAFTIGFPILKLKGHYLAMATLGMGIIVYIVFNEWI 129 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G +G L S I YY++ + + L Sbjct: 130 DMTEGPSGFSGIPNLELGPLVFDSD--------------IKNYYLVWSFVLGCVLLSVNL 175 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + I A+R I D + A + K+ FA+S+ +AG+ +A I+P F Sbjct: 176 ANSRIGRAFRAIHDAEVAARVMGVNARLLKVQVFALSAMICAIAGSLYAHVMTFIAPPSF 235 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+ ++ ++++V++GG+ S+ +L + E M+ Y Sbjct: 236 GFNISVELLTMVVIGGLGSIYGSFLGALLLTMLPEFLRFMHDY---------------DI 280 Query: 322 TLMVIALFLVILMRSHSLLR 341 L ++ + L+R Sbjct: 281 VFYGGLLMVMTIFMPGGLVR 300 >gi|297618502|ref|YP_003703661.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM 12680] gi|297146339|gb|ADI03096.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM 12680] Length = 325 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 132/337 (39%), Gaps = 41/337 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + +L V L+ + A Y + I ++ A L+++ G G LSL Sbjct: 14 ISVLLVAMFFLVQYLINAQLLDVYYQINLFMMGINIILAVSLNLITGFTGQLSLGHAGFM 73 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAY ++ S+ G S+ + + + +G G+++G+P+L+ +GDYLAIATL EI + Sbjct: 74 AVGAYVAAVMTSKLGYSLPVAVLSGCIAAGVAGVLIGVPTLRLKGDYLAIATLGFGEIVR 133 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +L+ + I ++ + L ++ Sbjct: 134 VVLLNIDYVGGAA--------------------------GLIGIAQLTNWTWLFFSVLVT 167 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I L ++ A +R+N+ A + K+ AF V + F G+AGA +A Sbjct: 168 LLFIQNLINSSYGRACLAVRENEVAAEMMGVDTTKYKILAFTVGAFFAGLAGALYAHYFF 227 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I P F F + V+ +V+LGG+ S + A L + Sbjct: 228 IIQPGTFSFFRSFDVLVMVVLGGLGSTTGAVLAAVFLTILSAGLQSF------------- 274 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L + ++ R L+ + S + R Sbjct: 275 --PEIRMVIYSVVLIVTMIYRPQGLMGNKEISLRIFR 309 >gi|160898468|ref|YP_001564050.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160364052|gb|ABX35665.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 393 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 70/321 (21%), Positives = 135/321 (42%), Gaps = 19/321 (5%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 +L +F Y + I +Y + A L+ +GS + + +Y IGAY+ Sbjct: 86 VVLALVFPWVLGGDSYAMHLMIIACLYAVLALALNFQLGSANIPNFATGASYGIGAYASA 145 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L +G+S W+ + V+A ++ G ++GLPS++ R Y A+ T+ + +L+ + Sbjct: 146 LLAIHFGVSFWICLLVAAAVATVFGFLLGLPSMRTRDSYQALVTIAFGIVVHQLLMNLEW 205 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 T G G+ G + I + + + YYV + + L+ L Sbjct: 206 -TGGANGLVGIPSPTLFGHSFNDPITLWGH---SLPGQANFYYVAVALLGLAIVSAQRLH 261 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + AW +RD++ A + + + K+ AFAV + G AG +A ISPD F Sbjct: 262 SSRVGLAWNALRDDEIAARACGINVTWFKVKAFAVDAFLAGFAGTVYAFYVSFISPDNFT 321 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F ++ ++++VI GGM + + +L + E + Y Sbjct: 322 FLVSVTIMTLVIAGGMDNTLGVIVGAFLLTMLPEKLRAFSDY---------------RIL 366 Query: 323 LMVIALFLVILMRSHSLLRLR 343 + + +++R + R Sbjct: 367 FYGLVVIAFLIIRPRGIFPQR 387 >gi|84683937|ref|ZP_01011839.1| branched-chain amino acid ABC transporter, permease protein [Maritimibacter alkaliphilus HTCC2654] gi|84667690|gb|EAQ14158.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2654] Length = 659 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 98/311 (31%), Gaps = 26/311 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ + SI + I Sbjct: 370 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIIPNHTTSIIVAI 429 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ ++ A G+ M +++ + L+ + L + G + Sbjct: 430 PLAFAVTFAAGVAMERLVIRWLYNRPLET-LLATFGISIALQQLAKNIFGTQARPLTSP- 487 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V + + A + ++RT + R + N Sbjct: 488 --------DWLGGAWVLNDVVSISTVRIAIFVLALIFLAVFLFIMKRTRLGLETRAVTQN 539 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + F + S G+AG S + + V++G Sbjct: 540 PGMAGAMGINPGRVNMLTFGLGSGIAGIAGVAIGLYAQVTSE--IGQAYIVQSFMTVVVG 597 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ ++ + + N + + F + R Sbjct: 598 GVGNIWGTLLGAGLIGSLHKGIEWFNPSNTLAAQTYMIIFIIIFI-----------QFRP 646 Query: 337 HSLLRLRTPSN 347 ++ L+ + Sbjct: 647 RGIIALKGRAA 657 >gi|254691212|ref|ZP_05154466.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella abortus bv. 6 str. 870] gi|254695484|ref|ZP_05157312.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella abortus bv. 3 str. Tulya] gi|254699650|ref|ZP_05161478.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella suis bv. 5 str. 513] gi|254706095|ref|ZP_05167923.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella pinnipedialis M163/99/10] gi|254711607|ref|ZP_05173418.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella pinnipedialis B2/94] gi|256015178|ref|YP_003105187.1| branched-chain amino acid ABC transporter, permease/ATP-binding [Brucella microti CCM 4915] gi|256029759|ref|ZP_05443373.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella pinnipedialis M292/94/1] gi|256059391|ref|ZP_05449593.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella neotomae 5K33] gi|256256399|ref|ZP_05461935.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella abortus bv. 9 str. C68] gi|260756813|ref|ZP_05869161.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260882630|ref|ZP_05894244.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261215872|ref|ZP_05930153.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|261313532|ref|ZP_05952729.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261319230|ref|ZP_05958427.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261323352|ref|ZP_05962549.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261750114|ref|ZP_05993823.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|265986770|ref|ZP_06099327.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265999152|ref|ZP_06111581.1| branched-chain amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|297249757|ref|ZP_06933458.1| high-affinity branched-chain amino acid transport system permease LivH/high-affinity branched-chain amino acid transport ATP-binding protein LivG [Brucella abortus bv. 5 str. B3196] gi|255997838|gb|ACU49525.1| branched-chain amino acid ABC transporter, permease/ATP-binding [Brucella microti CCM 4915] gi|260676921|gb|EEX63742.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872158|gb|EEX79227.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260917479|gb|EEX84340.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|261298453|gb|EEY01950.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261299332|gb|EEY02829.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261302558|gb|EEY06055.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261739867|gb|EEY27793.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|263092450|gb|EEZ16703.1| branched-chain amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|264658967|gb|EEZ29228.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|297173626|gb|EFH32990.1| high-affinity branched-chain amino acid transport system permease LivH/high-affinity branched-chain amino acid transport ATP-binding protein LivG [Brucella abortus bv. 5 str. B3196] Length = 609 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 22 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ G+S W + + A I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 82 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + ++GG+ +++ +L+ + E L F Sbjct: 247 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321 >gi|260905268|ref|ZP_05913590.1| inner-membrane translocator [Brevibacterium linens BL2] Length = 358 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 132/326 (40%), Gaps = 28/326 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + L++ L A + YI + L + +G++I++G G LSL + Sbjct: 9 ILGTLAVLLIIALTPVAFGDENYIMRVITVGLCSAIAVYGMNIILGFTGQLSLAQGGFFG 68 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ +L + + S W V + + A G + GL +L+ + +Y AI T+ + I Sbjct: 69 IGAYTVGLLTTDFDWSFWQAFLVGVVGTSAIGYLFGLIALRTKDEYFAIFTMAIGFIIYL 128 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + +W+ +T+ +G+ S M+Y++ + Sbjct: 129 TISRWESVTHAHSGVNNVKFPEAGDLIDFSN-------------PTAMFYLVFIILLACV 175 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + +RR+++ TIR ++ ++ + +K AFA S+ F G+ G +A+ Sbjct: 176 YVTYAIRRSSVGRTLLTIRTSEDLADAIGVNVGLSKQLAFAASAFFGGIGGGLYASVVGF 235 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I PD + + +++GGM +++ T I+ + EL Y Sbjct: 236 IGPDAATVDKTFEFLMFILVGGMGTVAGPLVGTMIVTFLFELFQDFQAY----------- 284 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + +++ ++ Sbjct: 285 ----RFIVLGPIIIALVIFAPRGVVG 306 >gi|323699117|ref|ZP_08111029.1| inner-membrane translocator [Desulfovibrio sp. ND132] gi|323459049|gb|EGB14914.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132] Length = 348 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 66/322 (20%), Positives = 126/322 (39%), Gaps = 16/322 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L L ++ S+ I I V+ A L+++ G G +SL +GA Sbjct: 26 LMVGLFLAALCAAPFVLNTHLTSIVNLIFISVIGAVSLNLLTGVCGQISLGHGAFLGVGA 85 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ I +I+ GM+ G+PSL+ +G YLAIATL + + + + Sbjct: 86 YAAGQCSLHGVP-FLPAILTGGLITALVGMVFGVPSLRLKGIYLAIATLAAQLVLEYVFL 144 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G G+ + E+ MY++LL + ++ Sbjct: 145 HGGVLTGGSNGLLLEPP---------------SILGFSFDTEVRMYFLLLAFAAGALLMV 189 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + R+ A+ +IRD + + + KL+AF +SS G+AG + IS Sbjct: 190 TNIMRSKYGRAFVSIRDFYLSAEIVGVNLFRYKLAAFGISSFLAGVAGGLWGHYTGYISA 249 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++++++GG+ S+ ++ + E+ + S Sbjct: 250 EQFNIGLSISYLAMIVIGGLGSVLGSVFGAVFIVLLPEILNALANVLAGSWPDVAQYIVA 309 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 + + L L ++ L Sbjct: 310 LREGVFGLTLILFLIFEPEGLA 331 >gi|294853795|ref|ZP_06794467.1| high-affinity branched-chain amino acid transport system permease LivH [Brucella sp. NVSL 07-0026] gi|294819450|gb|EFG36450.1| high-affinity branched-chain amino acid transport system permease LivH [Brucella sp. NVSL 07-0026] Length = 609 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 22 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ G+S W + + A I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 82 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + ++GG+ +++ +L+ + E L F Sbjct: 247 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321 >gi|89899084|ref|YP_521555.1| ABC transporter-like protein [Rhodoferax ferrireducens T118] gi|89343821|gb|ABD68024.1| ABC transporter related [Rhodoferax ferrireducens T118] Length = 598 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 111/322 (34%), Gaps = 22/322 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V + L + ++ + I +Y + GL ++ G GL S IGAY+ Sbjct: 19 VVVVACMLLYAVSPVPEFWITQLNYIALYSLVILGLVLLTGIGGLTSFGQAAFVGIGAYT 78 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L G S WL + I+G +++G +L+ G YL +AT+ ++ Sbjct: 79 SAYLTVHMGWSPWLTVFAGLFITGISALVVGWITLRMSGHYLPLATIAWGLSLYYLMGNL 138 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + GI L G + + + GM +A +L Sbjct: 139 DAL-GKYDGILGVPALTVWGWDISQ--------------GRSFFVLAWGMVLFAAFALLN 183 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + A + +R + ++ + K+ F +++ F ++G FA + ++P Sbjct: 184 LMDSRTGRAIKAMRASTLMAEAMGVDTLRHKVGIFLIAALFASLSGWLFAHFQRTVNPSP 243 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F I + + +LGG + + + + + + Sbjct: 244 FGLKMGIEYLFMTVLGGAGYVWGAISGAVMTKLLEDELQVLLPKLLGT-------SGSYE 296 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 + I L LV+ + L Sbjct: 297 VIVFGIVLVLVLKYLPDGVWSL 318 >gi|90423205|ref|YP_531575.1| ABC transporter related [Rhodopseudomonas palustris BisB18] gi|90105219|gb|ABD87256.1| ABC transporter related [Rhodopseudomonas palustris BisB18] Length = 593 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 133/319 (41%), Gaps = 30/319 (9%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 ++ YI ++ +Q + + +GLS+V+G G ++L + GAY+ Sbjct: 31 AAIVVALAATVSFDGYILNILMQATTFAIAVFGLSVVLGLCGQINLAQAAFFGFGAYAVG 90 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 I + + LS WL + I+ G ++G +L+ G YLA+ T+ +I ++I Sbjct: 91 IGTTDFQLSYWLCLAAGCGIALLAGAVLGASTLRLGGHYLAMVTISFQQIVTLVMINAIW 150 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T+G G+ R ++ + M L + L Sbjct: 151 LTHGPDGVGRIGRPALFQSSQ------------------AYLAFCVAMLALVGYFVWHLP 192 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 T + A R +RDN+ A + K+ AFA+S+ G+AG FA ISPD F Sbjct: 193 DTRLGRAMRAVRDNELAAGVAGIDVFRTKVYAFALSAVLGGLAGGLFAGGFSYISPDQFS 252 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F+E+I+ +++ +LGG S A TA+LI + E F S + Sbjct: 253 FAESIVFLTMSLLGGGASPIGSAIGTALLILIPEWLR------------FLKSVPGLYLA 300 Query: 323 LMVIALFLVILMRSHSLLR 341 + +++ L+I + Sbjct: 301 IYGLSVILIIRFMPDGIWG 319 >gi|256157912|ref|ZP_05455830.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella ceti M490/95/1] gi|256253128|ref|ZP_05458664.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella ceti B1/94] gi|261220233|ref|ZP_05934514.1| conserved hypothetical protein [Brucella ceti B1/94] gi|265996421|ref|ZP_06108978.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|260918817|gb|EEX85470.1| conserved hypothetical protein [Brucella ceti B1/94] gi|262550718|gb|EEZ06879.1| conserved hypothetical protein [Brucella ceti M490/95/1] Length = 609 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 22 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ G+S W + + A I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 82 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + ++GG+ +++ +L+ + E L F Sbjct: 247 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321 >gi|325275615|ref|ZP_08141517.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas sp. TJI-51] gi|324099289|gb|EGB97233.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas sp. TJI-51] Length = 592 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 129/315 (40%), Gaps = 25/315 (7%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 + + ++ + I I Y A +IV G G LSL + Y GAY +L Sbjct: 20 IIPFSAGSNFVFHLFILICSYAALASAWNIVGGFAGQLSLGHAVFYGTGAYVSTLLLLHL 79 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 G+S WL + V A++S +++ P + RG + A+AT+ + E+ + ++I +T G A Sbjct: 80 GMSPWLGMLVGAVVSTVLAVVISWPCFRLRGPFFALATIAVLEVVRLLVINQHDLTGGAA 139 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ V +L R+ + G ++ + ++ + + Sbjct: 140 GLAVPLKLGAEWMLFRARW--------------PYLLIAFGFLAITLLVSWKIKHSRLGY 185 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENI 267 +R+ + A ++ + KL A A+S+A + G+F A I P MF +I Sbjct: 186 YLIAVREREDAAQAVGVNAVKVKLIAVALSAALTSLIGSFHAMYLTFIEPGAMFSLELSI 245 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + ++GG+ +LS T I++ + EL G + + H + + Sbjct: 246 QIAMFALIGGLGTLSGPLIGTLIVLPLAELARG----------WLGDAGSGVHGLVYGLV 295 Query: 328 LFLVILMRSHSLLRL 342 L +L L+ Sbjct: 296 LVAFVLTIPQGLVGR 310 >gi|319779233|ref|YP_004130146.1| ABC-type branched-chain amino acid transport systems, ATPase component [Taylorella equigenitalis MCE9] gi|317109257|gb|ADU92003.1| ABC-type branched-chain amino acid transport systems, ATPase component [Taylorella equigenitalis MCE9] Length = 597 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 122/325 (37%), Gaps = 22/325 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + ++ ++L + + ++ + I I + A GL I+ G G+ S I Sbjct: 4 IFVAIFAIVLVVMPLVPATPEFWINQLNTIGISSLVALGLIILTGIGGMTSFGQAAFMGI 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ L + GLS W+ + +++ I+G +L+ G +L ++T+ +S +F + Sbjct: 64 GAYTSAYLCTALGLSPWIGLLCGLLLASLIAFILGQLTLRLSGHFLGLSTIALSLVFFYL 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + GI + G + + +Y++ F Sbjct: 124 FGNMEFL-GRHDGIPGIQPISIFGFSFMKARQM--------------FYLIWFCVFAGIL 168 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + L + A +++ S ++ AF ++ F +AG +A + I Sbjct: 169 LSINLLNSRNGRAICSLKHGASMAESFGINTQKYRMVAFVYAAFFAALAGWLYAHEQRAI 228 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F + I + + ++GG S+ A++I + + + + + Sbjct: 229 SPSAFSLNYGIEYLFMAVIGGSVSIWGAVVGAALVIILRDQIQAYAPLFVDERVNV---- 284 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ L Sbjct: 285 ---EIIVFGVMMILILHFARGGLWP 306 >gi|39998482|ref|NP_954433.1| branched-chain amino acid ABC transporter permease [Geobacter sulfurreducens PCA] gi|39985429|gb|AAR36783.1| branched-chain amino acid ABC transporter, permease protein [Geobacter sulfurreducens PCA] gi|298507427|gb|ADI86150.1| branched-chain amino acid ABC transporter, membrane protein [Geobacter sulfurreducens KN400] Length = 307 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 132/318 (41%), Gaps = 38/318 (11%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + + I I ++ A GL+++ G G LSL +IGA++ ++ R GL Sbjct: 11 LVDPYTLQILVNIGIAIVLALGLNVITGITGQLSLGHAAFMSIGAFTSAVITLRTGLPFS 70 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +S +I+ G +G P L+ GDYLAI TL +EI + + + Sbjct: 71 ANLLLSGLITAFVGAAIGYPILRLTGDYLAICTLGFAEIVKVVFLNLDITN--------- 121 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + I M ++ + LS + +++ + A + I Sbjct: 122 --------------KALGLSVPPARSPIPMPIIVWVVAILSIIFVCFMKESRFGRALKAI 167 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 RD++ A ++ I K+ +FAV S G+ G +A I+P F F +++ ++S+V Sbjct: 168 RDDEIAAEAMGINIARYKVQSFAVGSFLAGVGGCLYAHFLSYINPSDFGFLKSVDILSMV 227 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ S++ +IL E M+ Y + L +++ Sbjct: 228 VLGGLGSIAGTVFGASILAAAPEFLRFMSQY---------------RMLVYGGLLVFLMV 272 Query: 334 MRSHSLLRLRTPSNFLER 351 R + LL ++ + R Sbjct: 273 FRPNGLLGGINFTDLVLR 290 >gi|283850319|ref|ZP_06367608.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] gi|283574345|gb|EFC22316.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] Length = 348 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 148/307 (48%), Gaps = 8/307 (2%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y+ + + I++Y++ A GL+I+ G GLL L V Y IGAY+ +L Y +S W Sbjct: 24 FRDVYVLHVLVLIMVYMVLAMGLNILPGFCGLLDLGFVGFYGIGAYTAGLLTIHYNMSFW 83 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 +++P++A+ G+++G+P+L+ GDY AI T SE+ L +T G G+ Sbjct: 84 VIVPLAALNGAFFGILLGVPTLRLVGDYFAIVTFGFSELVVLFLTNEIWLTRGPLGVPGI 143 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + T + +L+ E+ YY+ + M L + L + + AW I Sbjct: 144 APVSLDVTWLATLLGVDERWRYAFRGEVPYYYLAMAMVLLVYIGMRRLEDSRLGRAWLAI 203 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R++ A S ++ K+ AFAVS+A MAGAFFA ISPDMFKF E+ +V+ +V Sbjct: 204 REDPMAAASTGVNLLAYKVIAFAVSAAIGAMAGAFFARWTLFISPDMFKFWESFLVLCMV 263 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +++ ILI + E+ + + + L++ Sbjct: 264 VLGGLGNINGALVGAVILIALGEILRVILPKLG--------LPAETRFLAYGLIMVLIMR 315 Query: 334 MRSHSLL 340 R + Sbjct: 316 FRPGGIF 322 >gi|331696387|ref|YP_004332626.1| phosphonate-transporting ATPase [Pseudonocardia dioxanivorans CB1190] gi|326951076|gb|AEA24773.1| Phosphonate-transporting ATPase [Pseudonocardia dioxanivorans CB1190] Length = 626 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 110/289 (38%), Gaps = 31/289 (10%) Query: 53 AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112 +++ G+ G S+ G Y+ + + + + ++ G+++GL Sbjct: 66 GASHTLLFGAAGQPSVGHAALLGAGVYAGIAVSRHTTFGMEGEFVAAIVVGALIGVVIGL 125 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 PSL+ YLAIATL + + Q I +W +T G AG V+ Sbjct: 126 PSLRIGSLYLAIATLALCIVAQQIFFEWTDLTGGGAGTQVSPPK---------------- 169 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 V + + Y+ L + ++ L R AW +R + A SL ++ + K+ Sbjct: 170 LFGAVYTPLGLLYIALVVMGIALLFARNLLRGRQGRAWNAVRTSPLAASSLGISLGWQKV 229 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 AF VS A +G AG +A + + +SP F +I+ + I I+GG L A + Sbjct: 230 GAFGVSGAMVGCAGVLYAHAVNYVSPSDFSLELSIVTLVIAIIGGQRYLWGAALGAIFVE 289 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 G+ E+ + + +V++ Sbjct: 290 GLPEMLRTAGEF---------------RYVIYGAVFVVVMIFFPEGFAG 323 >gi|71909707|ref|YP_287294.1| inner-membrane translocator:ABC transporter related [Dechloromonas aromatica RCB] gi|71849328|gb|AAZ48824.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Dechloromonas aromatica RCB] Length = 950 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 121/321 (37%), Gaps = 22/321 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + L + ++ ++ I +Y + A GL ++ G GL S +GAY+ Sbjct: 371 MLAFVAVLGISPLLLPEFTITLLNYIGLYAVVAVGLVLLTGVGGLTSFGQAAFVGLGAYT 430 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L + YGLS WL + + I+ A + +G +L+ G YL + T+ + Sbjct: 431 TAWLTTVYGLSPWLTLFIGMAITAAVALSLGFITLRMGGHYLPLGTIAWGISLYFLFGNV 490 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + + G GI + G ++S F +Y++ + L+ I Sbjct: 491 EFL-GGHTGITGIPAVSLFGWELKSGREF--------------FYLIWLVVLLAIVSIRN 535 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + + A R ++ ++ K+ F +++ ++G +A + ++P Sbjct: 536 LLDSRVGRAIRALKGGTVMAEAMGVNTAREKIIIFLIAALLASISGWLYAHLQRFVNPTP 595 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F ++ I + + ++GG+ + ++ + + + F Sbjct: 596 FALNQGIEYLFMAVVGGIGHVWGAVLGAGVITILKQWLQDLLPQLLGQSGNF-------E 648 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + IA+ L++ L Sbjct: 649 VIVFGIAMVLILQKARAGLWP 669 Score = 49.9 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 30/256 (11%), Positives = 75/256 (29%), Gaps = 18/256 (7%) Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 ++++ + +A G ++ L +W + ++ ++ G ++ + + + Sbjct: 96 IVNVGIPLLFAAGLFA----MPPTQLPLWTQVVIAMLLVVPLGPMIYRIAFQPLASAPVL 151 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 LI++ LI + G G F + + Sbjct: 152 VLLIVAVAVHLALIGLGLLFFGAEGWRTPAFTDL------------SFELAGAPLQGQTV 199 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 V++ L + + RT A R N+ + + A F +++A Sbjct: 200 LVVVASALLIIGLYFFFERTIYGKALRATAMNRTGARLMGIPPVLAGKLCFTLAAAIGAF 259 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 +G A F + I+GG+ S A ++ + Sbjct: 260 SGILIAPITTI--YYDSGFLIGLKGFVGAIIGGLASYPLAALGAILVGLLESYSSFYASA 317 Query: 305 YFNSLLKFDCSFNMRH 320 + ++ + Sbjct: 318 FKEVIVFTLIIPVLLW 333 >gi|330826683|ref|YP_004389986.1| monosaccharide-transporting ATPase [Alicycliphilus denitrificans K601] gi|329312055|gb|AEB86470.1| Monosaccharide-transporting ATPase [Alicycliphilus denitrificans K601] Length = 604 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 61/308 (19%), Positives = 122/308 (39%), Gaps = 31/308 (10%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + + I + + A G++++VG G SL +A+GAY+ +L +R+G + W Sbjct: 25 TDNDFHLRVLFLIGVNYIAAAGMNVLVGYTGQKSLGHAGLFAVGAYTVALLTARWGWNPW 84 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +++G G+++ LP+L+ +G LA+ T+ + + I+ +W+ + G+ GIY Sbjct: 85 PAFVAAGVMAGIFGVVIALPALRVKGPALAMVTIGFGIVVEKIVSEWQDVFAGQQGIYGV 144 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L GT S + +L + ++ L R A+ + Sbjct: 145 LPLSLGGTMFSSKQW---------------VWFVLLLGVALHVMLRLLLRGRFGRAFMAV 189 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 + A S+ ++ K+ AF +S+ G+AGA A I+ D F+ +I ++ +V Sbjct: 190 NTAEVAAESVGISVYRFKVLAFVISAVTCGLAGALIAQQNQYINSDFITFNLSIFILLMV 249 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 + GG S+ +L + + L + Sbjct: 250 LFGGH-SVYGPLLGAVVLTLLDSFLSR---------------WPGVQHFTYGALLLFALY 293 Query: 334 MRSHSLLR 341 L Sbjct: 294 AMPDGLAG 301 >gi|291297024|ref|YP_003508422.1| inner-membrane translocator [Meiothermus ruber DSM 1279] gi|290471983|gb|ADD29402.1| inner-membrane translocator [Meiothermus ruber DSM 1279] Length = 477 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 158/373 (42%), Gaps = 36/373 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +A+ +L A + ++ +GIQI I+ A GL++VVG GLL L + Sbjct: 94 LVRVALGAAILFIAVPIAGLTNSFLFELGIQIGIFAALALGLNVVVGQAGLLDLGFAAFF 153 Query: 75 AIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 AIGAY++ I GS G ++L + ++ + + G+++GLP+L+ RGD Sbjct: 154 AIGAYTWGIFGSPQAAQFIPGYPSEGLPGNYLYLFMALAVITAAITGVLIGLPALRLRGD 213 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR--------LYFLGTTVRSLIRFFRF 172 YLAI TL + E+ + N G L + + + R Sbjct: 214 YLAIVTLGLGEVVRVFANNLDKPLNITNGPQGITPVNRPEVGPLTEFLRAIGAERLYGRP 273 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + Y F Y ++L + + + + L + AW IR+++ A ++ ++ KL Sbjct: 274 IDEPIAYAFFFYLLVLVVIGIVVLVNIRLANSRFGRAWVAIREDEIAAKAMGIPLLPTKL 333 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 AFA +AF G GA FAA + +SP+ F +I +++ VILGGM S+ A + Sbjct: 334 LAFATGAAFSGAMGAIFAAKQTFVSPESFTLQASINILAFVILGGMGSIGGAVVGAAAVT 393 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHT--------------TLMVIALFLVILMRSHS 338 + N+ + + + + + L L+++ R Sbjct: 394 VLNIGILKDFSDLLNTWRQTGVTILGYNMANLPPQLNPAKYERLVFGLILILMMIFRPEG 453 Query: 339 LLRLRTPSNFLER 351 L+ + L+ Sbjct: 454 LIPEQRHRAELQE 466 >gi|319764467|ref|YP_004128404.1| abc transporter related protein [Alicycliphilus denitrificans BC] gi|317119028|gb|ADV01517.1| ABC transporter related protein [Alicycliphilus denitrificans BC] Length = 604 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 61/308 (19%), Positives = 122/308 (39%), Gaps = 31/308 (10%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + + I + + A G++++VG G SL +A+GAY+ +L +R+G + W Sbjct: 25 TDNDFHLRVLFLIGVNYIAAAGMNVLVGYTGQKSLGHAGLFAVGAYTVALLTARWGWNPW 84 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +++G G+++ LP+L+ +G LA+ T+ + + I+ +W+ + G+ GIY Sbjct: 85 PAFVAAGVMAGIFGVVIALPALRVKGPALAMVTIGFGIVVEKIVSEWQDVFAGQQGIYGV 144 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L GT S + +L + ++ L R A+ + Sbjct: 145 LPLSLGGTMFSSKQW---------------VWFVLLLGVALHVMLRLLLRGRFGRAFMAV 189 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 + A S+ ++ K+ AF +S+ G+AGA A I+ D F+ +I ++ +V Sbjct: 190 NTAEVAAESVGISVYRFKVLAFVISAVTCGLAGALIAQQNQYINSDFITFNLSIFILLMV 249 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 + GG S+ +L + + L + Sbjct: 250 LFGGH-SVYGPLLGAVVLTLLDSFLSR---------------WPGVQHFTYGALLLFALY 293 Query: 334 MRSHSLLR 341 L Sbjct: 294 AMPDGLAG 301 >gi|119387518|ref|YP_918552.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119378093|gb|ABL72856.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Paracoccus denitrificans PD1222] Length = 319 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 70/324 (21%), Positives = 125/324 (38%), Gaps = 24/324 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 ++ L Y +G I + + G+ I+ G G +SL IG Sbjct: 9 ATLLVLAALIAVTPFFFPSGYYYRVGALIFVNGLAVTGIVILTGYAGQISLGHAGFAGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ + + GL L + + A ISG ++G P L+ +G YLA+ATL + +L Sbjct: 69 GYACALAPTHLGLHPSLAVVLGAAISGVLAYLVGRPILRLKGYYLAVATLGFGILVSMVL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + +T G GI V + L F Y+ + A I Sbjct: 129 NNERQLTGGPDGIAVPELGLRGLLKDWGLDLTNGQ---------FWYFFCGIALLIGAWI 179 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L ++ A R + ++ A ++ + KL AF +S+ + +AG+ A I+ Sbjct: 180 ALNLHQSPSGRALRALHGSEIAAGTVGIDVARVKLQAFVISAVYASVAGSLVALQNKFIT 239 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD+ F +I ++++ +LGG S+ IL + + Y Sbjct: 240 PDVAGFMHSIEMVTMAVLGGAGSVLGAIFGAGILTLLPQALTVFAEY------------- 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 ++ + + LV++ LL Sbjct: 287 --EQLVLGLVMMLVMIFLREGLLP 308 >gi|265993180|ref|ZP_06105737.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|262764050|gb|EEZ10082.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] Length = 609 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 22 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ G+S W + + A I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 82 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + ++GG+ +++ +L+ + E L F Sbjct: 247 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321 >gi|197301482|ref|ZP_03166561.1| hypothetical protein RUMLAC_00214 [Ruminococcus lactaris ATCC 29176] gi|197299442|gb|EDY33963.1| hypothetical protein RUMLAC_00214 [Ruminococcus lactaris ATCC 29176] Length = 362 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 138/337 (40%), Gaps = 24/337 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + K + I + ++ +++ + + A + + + + Y++ A L++VVG LG L Sbjct: 10 KTTKNNLITYAMVILAFVIMQILISAGSISSLLQGLMVPLCTYIILAVSLNLVVGILGEL 69 Query: 67 SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL +GA++ +L + + + + GM++G+P L+ +G Sbjct: 70 SLGHAGFMCVGAFTSAFFSKCTRDVIASDGLRFFLALLIGIVTAAIFGMLIGIPVLRLKG 129 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +N++ + K + L + Sbjct: 130 DYLAIVTLAFGEIIKNMVNVLYIGKDSKGFHVTTKDVMALNMDADGTVILNGPQGITGTP 189 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + + + + L+ I+ L + A IRDN+ A S+ I KL AF +S+ Sbjct: 190 KNSTFVIGFILILLTLFIVQNLINSRDGRAIMAIRDNRIAAESIGINITKYKLMAFTISA 249 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAILIGVVEL 297 A G AG +A + ++ + F N I ++ V+LGG+ ++ A IL + EL Sbjct: 250 AMAGAAGVLYAHNISTLTANTNNFGYNMSITILVFVVLGGIGNIRGSIIAAVILTLLPEL 309 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 GM Y + I L +++L Sbjct: 310 LRGMKDY---------------RMLIYAIVLIVMMLF 331 >gi|163743367|ref|ZP_02150747.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161383361|gb|EDQ07750.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] Length = 672 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 100/311 (32%), Gaps = 26/311 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ I + I Sbjct: 383 LDAISLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVIQLVIPDHTLSILVAI 442 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + ++ G+ M +++ + L+ + L + G + Sbjct: 443 PAAFAVTFGAGIAMERLVIRWLYNRPLET-LLATFGISIALQQLAKNIFGTQARPLTAP- 500 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V + + A ++ +RRT + R + N Sbjct: 501 --------GWLDGAWIVNDVVSISYIRIAIFVLALGFLALLLFIIRRTRLGLETRAVTQN 552 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + S+ + F + S G+AG S + V++G Sbjct: 553 RSMAASMGINPDRVNMLTFGLGSGIAGIAGVAIGLFAKVTSELGNDYIVQS--FMTVVVG 610 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ ++ + +N S + T M++ + + I R Sbjct: 611 GVGSIWGTLAGAVMIGFSQKGIEWLNP-----------SNTLAAQTYMIVLIIIFIQFRP 659 Query: 337 HSLLRLRTPSN 347 ++ LR + Sbjct: 660 RGIVALRGRAA 670 >gi|242309182|ref|ZP_04808337.1| abc transport system permease protein [Helicobacter pullorum MIT 98-5489] gi|239524223|gb|EEQ64089.1| abc transport system permease protein [Helicobacter pullorum MIT 98-5489] Length = 399 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 71/371 (19%), Positives = 136/371 (36%), Gaps = 38/371 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + +++ LFL Y + ILI+V+ A +++ G G LSL AIG Sbjct: 21 LLLYIGVIIVLFLAQCFLNDYALRIFNNILIFVILAVSYNLINGVTGQLSLEPNGFVAIG 80 Query: 78 AYSYVIL-------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 AY ++ + + S +++ +++ P + R Sbjct: 81 AYITALMLLDEDLKLGMFELAEPHPFVLSMYSELLPALLCSGVVAALIAILLAFPVFRVR 140 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR------------------LYFLG 160 GDYLAI TL I + + I TNG G+ L Sbjct: 141 GDYLAIVTLGFGFIIKILAINNPQWTNGAIGLNEIPNNADSVVGGIQNFLKGLLDSQSLP 200 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 +++ + F S I + + + + +IL + + A + +RD++ A Sbjct: 201 EFLKNPLNFVYTHSFENGANITVLFWSGIIATAAVILILQIVYSKYGRAMKAVRDDEDAA 260 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ K AF+ S+ G+ G A I P +F F ++ I++LGG+ S Sbjct: 261 IAMGINTFKIKTFAFSTSAFLEGVGGGLMAVLLTTIDPKIFGFELTFQLLIIIVLGGLGS 320 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + T ++IG E ++ F ++ + L +++L ++ Sbjct: 321 TTGAIVGTILVIGGGEWLRFLDQPLVFFGQDFG-AYPGLRMVFFSLILLVIMLFAREGIM 379 Query: 341 RLRTPSNFLER 351 + + R Sbjct: 380 GKKELWDLKPR 390 >gi|300865987|ref|ZP_07110721.1| putative Inner-membrane translocator [Oscillatoria sp. PCC 6506] gi|300335978|emb|CBN55879.1| putative Inner-membrane translocator [Oscillatoria sp. PCC 6506] Length = 521 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 88/377 (23%), Positives = 158/377 (41%), Gaps = 41/377 (10%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L + +L+ ++ + +QI I+++ A GL+I VG GLL L + Sbjct: 129 LATLVTLAFILISFPFVDAAAKTEWIATVVQIQIFIILALGLNIPVGFAGLLDLGYAAFF 188 Query: 75 AIGAYSYVILGS---RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AIGAY+ +L S + W+++P++A+++ G+I+G P+L+ RGDYLAI TL E Sbjct: 189 AIGAYTTGLLSSPQLNLYWNFWVVLPIAALVAAIAGVILGTPTLRLRGDYLAIVTLGFGE 248 Query: 132 IFQNILIKWKPIT---------NGKAGIYVAD------------RLYFLGTTVRSLIRFF 170 I + + G G Sbjct: 249 IIPVVFRNLTSVRIEEPISKLLGSIFGHPEIAICFLGCEQPLNLTGGEAGINPIGRPFLP 308 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 + YY++L + S +I LR + + AW +R+++ A ++ ++ Sbjct: 309 IVGTFSAGNYYPWYYLILCLVVFSYFMISRLRDSRLGRAWAAMREDELAASAMGINLVKT 368 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 KLSAFA+ + F G AGAF+AA I P +F FS ++I++ +VILGG+ ++S + + I Sbjct: 369 KLSAFAMGATFSGFAGAFYAAYISAIFPSVFDFSVSVIILCMVILGGLGNMSGVILGSII 428 Query: 291 LI-----------------GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++ + + L L + L ++++ Sbjct: 429 IMSADRLYLPQLAQILKGFLNTSVLPNITSPELRDFLATSLDPIQLRLFLFGLTLVVMMI 488 Query: 334 MRSHSLLRLRTPSNFLE 350 +R L+ + L Sbjct: 489 VRPEGLIPDKVHQAELH 505 >gi|284031015|ref|YP_003380946.1| inner-membrane translocator [Kribbella flavida DSM 17836] gi|283810308|gb|ADB32147.1| inner-membrane translocator [Kribbella flavida DSM 17836] Length = 561 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 76/343 (22%), Positives = 132/343 (38%), Gaps = 23/343 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + + F F S+ Q+LI+ A GL+IVVG GLL L + Sbjct: 216 VLTLAAFAVAFFFPFTQNGSDANMSIATQVLIFAATAMGLNIVVGLAGLLDLGYIAFLGS 275 Query: 77 GAYSYVI------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 GAY + + ++ + A ++ G+I+G P+L+ GDYLAI TL Sbjct: 276 GAYVAAMLSESAFATIDWHPPFLAVVLIGACVAATLGLIIGSPTLRVSGDYLAIVTLGFG 335 Query: 131 EIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 EIF+ ++ I G + L + + Y++LL Sbjct: 336 EIFRLAMLNLDGINGPLLTNGPNGIPGIPELQVGGFNFGDEHTVLGLELGRFANYYFLLL 395 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + L + I W IR+++KA ++ + KL AFA+ + G+AG Sbjct: 396 ILIAFVILVFARLNDSRIGRGWIAIREDEKAAEAMGVNVFGLKLLAFAIGAFLAGLAGTI 455 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A +SPD + F E+ +++ ++LGGM +++ + IL + E + Y Sbjct: 456 KAHQDVAVSPDQYIFLESAFLLAAIVLGGMGTIAGVLLGATILKLLPEKLRFFSEYRLLL 515 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ R L+ R Sbjct: 516 FGLLLVL---------------MMRFRPEGLVASRRRQLEFHE 543 >gi|317123161|ref|YP_004103164.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter marianensis DSM 12885] gi|315593141|gb|ADU52437.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter marianensis DSM 12885] Length = 361 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 21/332 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L V L L L +Y+ + Q IYV+ A L++++G G LS+ Sbjct: 25 WLLQLAVIVGLYQLLLAWAGGNRYLLVVLTQAGIYVIMAVSLNLILGYTGQLSIGHAGFM 84 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAY+ IL + + + + +++GA G+++G+PSL+ RGDYLAIATL EI Sbjct: 85 AVGAYAAAILTKFFDVPFPVALAAGGLLAGAAGLLVGIPSLRLRGDYLAIATLGFGEIIS 144 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +L + G +I I + G+ L+ Sbjct: 145 VLLSLINEVPVGTR-----------------VIDVGGAQGLIAIPRHTTFAWTYGVAVLA 187 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ + A IR+++ A ++ K+ AF + + G+AG A Sbjct: 188 VKLVWHFVHSTHGRACIAIREDEVAAEAMGIPSTRYKVMAFTIGALLAGVAGGLHAHQYL 247 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P + F ++ ++ IV++GGM S + A V + + + Sbjct: 248 YLNPALAGFMNSVFILVIVVIGGMGSTTGAVLAAVFFTYVNQAL----PNWMQAAHLPSN 303 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 L + L LV+L+R LL + Sbjct: 304 IAPAVRMVLFSVLLILVMLVRPRGLLGGVELT 335 >gi|226310202|ref|YP_002770096.1| branched-chain amino acid ABC transporter permease [Brevibacillus brevis NBRC 100599] gi|226093150|dbj|BAH41592.1| probable branched-chain amino acid ABC transporter permease [Brevibacillus brevis NBRC 100599] Length = 427 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 31/352 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A+ +LL + +Y + Q+ IYV A GL+IVVG GLL L V +A G Sbjct: 59 MAIGAIVLLLIIPLVAGENRYYMEVASQVGIYVAMALGLNIVVGFAGLLDLGYVAFFAAG 118 Query: 78 AYSYVILGSRYGL-------------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 AY+Y I + W + V +++ G+++GLP L+ +GDYLAI Sbjct: 119 AYAYAIFSTSQANEFIAGNLFPLSGEWFWPFLIVGLIVAAVFGILLGLPVLRVKGDYLAI 178 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL EI + + N G + + + Y Sbjct: 179 VTLGFGEIIRIVFNNLDKPINITNGPQGITPIPSPELF-----------GIKMGTPFYFY 227 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 +++L + + + + AW +R+++ A S+ +++ KL+AFA+ ++F G+ Sbjct: 228 FIVLFVIAFIVLANIRFEHSRLGRAWIAVREDELAAQSMGISLLNTKLAAFALGASFAGV 287 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G FAA + I P F E+I ++ +VILGG S+ + A + + Sbjct: 288 VGVIFAAKQTFIDPTSFTLMESIGILVMVILGGSGSIPGVVLGAAFVTILQVQLLKEFSN 347 Query: 305 YFNSL-------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + +SL L + + I L LV L R + L+ + N L Sbjct: 348 FLHSLQNSGIISLPNQLDPSKFQRLIFGIMLILVALYRPNGLIPAKRKKNDL 399 >gi|218886577|ref|YP_002435898.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757531|gb|ACL08430.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 360 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 126/303 (41%), Gaps = 29/303 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y ++ + + ++ GL++++G G +S + +GAY IL + +G+ WL Sbjct: 55 SGYQFTVLNVVAVNLIVVTGLNLLMGYAGQISYGHAAFFGMGAYGSAILSATHGVDPWLA 114 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + VSA ++G+P+L+ +G+YL +ATL + I IL++W +T G +G Sbjct: 115 MGVSACGVAVAAAVVGVPTLRLKGNYLVMATLGFNLIVDVILVQWSEVTGGSSGFVGVPP 174 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L G + + F Y++ G+ L L + + A R I D Sbjct: 175 LAVAGISFDTDRSF--------------YWLAWGVALLLLIPARNLVHSPVGRALRAIHD 220 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ + K+ F +S+ F +AG+ A ++P F +++ +++ ++ Sbjct: 221 SEPGAEACGVPTASYKVQVFVLSAVFASLAGSLHAHYLGIVAPKTFDIFKSVEFVTMCLI 280 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM SL +L + ++ + H + L ++++ Sbjct: 281 GGMGSLWGGLAGALLLTVLPQMLGVFEEH---------------HDLIFGAILLVMLIFM 325 Query: 336 SHS 338 Sbjct: 326 PRG 328 >gi|291458417|ref|ZP_06597807.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291418950|gb|EFE92669.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 343 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 28/326 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + + L L Y ++ +I Y++ GL+++ G GL+SL AIG Sbjct: 25 LLWIILTVFLLMLPFVFRNPYFLTVVAKIGCYIILGLGLNLLTGYTGLVSLGHAGFVAIG 84 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L + G + + + + G +MGLP+L+ G YL+I TL EI + +L Sbjct: 85 AYTASLLSVKAGCPFFPSMLAGMLAAALIGALMGLPTLRVTGTYLSIITLGFGEIVKMVL 144 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W+ +TNG G+ + G + + Y+++L M L + Sbjct: 145 MNWQSVTNGTLGVKNIPKPQIFGWKLTTANHGM-------------YFLILFMIVLISLF 191 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R+ A R IR+++ A + + K+ AF +S+ + GA +A+ I Sbjct: 192 CRSLMRSKTGRALRAIREDEMASTMMGIPVTAYKILAFVLSAVICALGGALYASLIGYID 251 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F + +++SIVILGGM +L I +LI EL + Y Sbjct: 252 PNTFNFDVSTLILSIVILGGMGTLRGIYVGAIVLIAFPELSRSLMKY------------- 298 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343 L L L++ R +L R Sbjct: 299 --RFVLYGAILVLMMRFRPSGILGWR 322 >gi|328544138|ref|YP_004304247.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter permease [polymorphum gilvum SL003B-26A1] gi|326413881|gb|ADZ70944.1| Branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Polymorphum gilvum SL003B-26A1] Length = 347 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 83/318 (26%), Positives = 140/318 (44%), Gaps = 15/318 (4%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L + L L Y + + I V A GL+I+ G GL+SL A+GAY+ Sbjct: 28 VLAVGLALAPLVLDNYWLYLACFVAINVASATGLNILTGFTGLVSLGQAAFMAVGAYTVA 87 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L R G L + + ++ G+++GLPSL+ +G YLAIAT+ S I + + W+ Sbjct: 88 VLEIRIGTPFLLNLVAAGAVAALIGVVVGLPSLRVKGLYLAIATIAASFILHFVFVNWQT 147 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG +G+ V F + + + +YYV + + L L Sbjct: 148 VTNGNSGLSVPPA---------------TFLGTPLTDYVQLYYVFVPITALMVLGAANLF 192 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 RT I A+ IRD + L +++ KL +FAVSS + G+AG +A ++P+ F Sbjct: 193 RTRIGRAFIAIRDRDISAEVLGISLLRYKLMSFAVSSFYAGLAGGMWAYFFRVVTPESFP 252 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I ++ +I+GGM ++ + V EL + L + T Sbjct: 253 FVYSIFFLAAIIVGGMGTILGGILGAVFMTLVPELLRFVVDILSPVLPNAGTLLSPVRTI 312 Query: 323 LMVIALFLVILMRSHSLL 340 + + ++ L Sbjct: 313 VFGALIIGFLVFEPKGLA 330 >gi|160937947|ref|ZP_02085305.1| hypothetical protein CLOBOL_02841 [Clostridium bolteae ATCC BAA-613] gi|158439173|gb|EDP16927.1| hypothetical protein CLOBOL_02841 [Clostridium bolteae ATCC BAA-613] Length = 371 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 122/341 (35%), Gaps = 4/341 (1%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + NK + V+ L T Y S+ + IY + A ++++ G GL Sbjct: 4 MTKNKNKLYTLIALVIIIGFLAFLQSDTAEYSYQISILERSAIYAVVAVSMNLLTGFTGL 63 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 SL AIGAY I G + + IS I + LA A Sbjct: 64 FSLGQAGFMAIGAYVVAIFTIPVGSR--ASVYYVSGISPVIANIQLPIPVALLLGGLAAA 121 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + +K + G R + ++ I + Sbjct: 122 AMAALIGIPVLRLKSDYLAIATLGFSEIIRAFIAAPMFDTITN--GSYGLKSIPGFPNIF 179 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + G+ L ++++ L ++ A+++IR+++ A S+ + K +F +SS F G+ Sbjct: 180 AVFGLAALCIALMVLLINSSYGRAFKSIREDEVAAQSMGINLFHYKELSFVISSFFTGVG 239 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G A I F+ + ++ IV+LGG+ S++ ++ EL + Sbjct: 240 GGMLAMFMRSIDSKTFQVALTYDILLIVVLGGIGSVTGSVAGAFLVTAGRELLRFFDDPL 299 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + + + I L V+L S ++ S Sbjct: 300 TIAGVSVPLFRSGFRMVIFSILLMAVVLFYSRGIMGNHEFS 340 >gi|225389470|ref|ZP_03759194.1| hypothetical protein CLOSTASPAR_03218 [Clostridium asparagiforme DSM 15981] gi|225044464|gb|EEG54710.1| hypothetical protein CLOSTASPAR_03218 [Clostridium asparagiforme DSM 15981] Length = 328 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 75/306 (24%), Positives = 132/306 (43%), Gaps = 29/306 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ + I+IL+Y M A L+++ G G ++L Y IG+Y+ IL +Y + L Sbjct: 29 SSYLLGILIRILLYTMLAGSLNMINGYSGQMNLGHAGLYCIGSYTAGILAVKYQVGFLPL 88 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +S ++ G ++ LP++K G YLAI T+ SEI + + + W +T G GI R Sbjct: 89 LFISGFVTALFGFLVSLPTIKLAGVYLAIVTIGFSEITRLVALNWTGLTGGPMGIKGIPR 148 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 G + + F YY+ L + L ++ + + I AW IR+ Sbjct: 149 PEIFGLRLSEPVHF--------------YYLALVLAVLVLFMMRRVVSSRIGRAWIAIRE 194 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +Q A L K F+ + G+AG F A IS DMF E ++++VI+ Sbjct: 195 DQVAASFLGVNTRRFKSLNFSFGAFIAGVAGCFAAYYYQFISSDMFSMDEGFNILAMVII 254 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG +L + ++ + E+ Y + + + +++ R Sbjct: 255 GGQGTLIGPVAGSLVVNTITEVFRFAADY---------------RMVMYAVLIIVMMWFR 299 Query: 336 SHSLLR 341 L+ Sbjct: 300 PQGLVG 305 >gi|311695771|gb|ADP98644.1| urea ABC transporter, permease protein UrtB [marine bacterium HP15] Length = 532 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 98/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+I G +G++++ +GAY+ + + L + +S Sbjct: 247 LSLGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWGMQQLFPGQPGLALILSIPA 306 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 G+ + YL L + +L + + + Sbjct: 307 GFLVAATAGIIIERSVIQYLKGRPL------ETLLATFGISLILQQLVRTVISPQNRTVV 360 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + YVL + A ++L +R+T + R + N+ S Sbjct: 361 TPDWMSGSLVINDALSLTLNRLYVLAFALIVFAGLMLIMRKTRLGLEVRAVTQNRAMARS 420 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + FA+ S G+AG + + + I +V+ GG+ +L Sbjct: 421 MGIRATRVDIMTFALGSGVAGLAGVALSQLTNV--GPNLGQNYIIDSFMVVVFGGVGNLW 478 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L + +L ++++ + L I R L Sbjct: 479 GTLIAGLSLGTINQLLEPWAGAVLAK-------------IIVLVFIILFIQKRPKGLFPQ 525 Query: 343 RTPSNF 348 + + Sbjct: 526 KGRAAE 531 >gi|78355657|ref|YP_387106.1| high-affinity branched-chain amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218062|gb|ABB37411.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 389 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 137/266 (51%), Gaps = 11/266 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A +L + Y ++ I L+YV+ GL+IVVG G+L L YAIG Sbjct: 90 AAFYCAVLGLGIVLPWLVSTYQTNIMISFLLYVILGLGLNIVVGVAGMLFLGYAAFYAIG 149 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYSY +L + +GL W ++PV +++ A G+ + P L+ RGDYLAI TL EI + +L Sbjct: 150 AYSYALLNTYFGLGFWTVLPVGGILAAAAGVALAFPVLRLRGDYLAIVTLGFGEIVRLVL 209 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 W T G +GI R F I++YY++L M L+ + Sbjct: 210 ENWSDFTQGPSGISNIPRPS-----------LFGAELGVAETGIYIYYIVLVMAVLTVAA 258 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + ++ + I A + +R+++ A ++ + KL+AF V +A+ G AG FAA I+ Sbjct: 259 VQRIKDSRIGRALQALREDEIACQAMGIDRVNVKLTAFGVGTAWAGFAGVIFAAKTTFIN 318 Query: 258 PDMFKFSENIIVISIVILGGMTSLSK 283 P F F E+ I++SIV+LGGM S Sbjct: 319 PASFTFMESAIILSIVVLGGMGSRRG 344 >gi|225386521|ref|ZP_03756285.1| hypothetical protein CLOSTASPAR_00268 [Clostridium asparagiforme DSM 15981] gi|225047380|gb|EEG57626.1| hypothetical protein CLOSTASPAR_00268 [Clostridium asparagiforme DSM 15981] Length = 291 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 124/311 (39%), Gaps = 38/311 (12%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + IY++ G+SI+ G GL S+ AIGAY+ ++ + + I + + Sbjct: 2 NYWMGVATLTGIYMIAILGVSILTGFTGLFSMGHAGFMAIGAYTSALITKTFHVPILVGV 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G+I+G P+LK +GDY IATL + E+ + I+ +T G G+ + Sbjct: 62 FCGMLTALVIGLIIGYPTLKLKGDYFVIATLGIGEVTKLIIENMPNLTGGARGLTDVPKG 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 V+L + + R+ +R+ Sbjct: 122 ATFP-------------------------VVLCFLVVIVWGLRNFLRSKHGRNCIAVREE 156 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A S+ + K+ A +S A G++GA A ++P MF ++ ++ VILG Sbjct: 157 ELATASIGANVANYKMLAMGISCALCGISGALLAHYMHYLNPTMFNMVKSDELVMTVILG 216 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G SL+ A+ IL+ + E+ S + + LVI+ + Sbjct: 217 GCGSLTGTIVASMILVPLPEILRF-------------GSVQEWRMVFYGLLVVLVIIFKP 263 Query: 337 HSLLRLRTPSN 347 L+ + S Sbjct: 264 SGLMGTKEFSI 274 >gi|313114339|ref|ZP_07799872.1| amino acid or sugar ABC transport system, permease protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310623333|gb|EFQ06755.1| amino acid or sugar ABC transport system, permease protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 343 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 135/340 (39%), Gaps = 39/340 (11%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ + V + FL Y + + + + I ++ A L++ G LG L L Sbjct: 15 RYLMNAVLVALLFVGLSFLTQNVLSTYQNKVLLTVGINIILAVSLNVATGYLGQLPLGHA 74 Query: 72 IAYAIGAYSYVILGSRYGLS----IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 A+GAY+ + L + + ++ +++G G+++G+P+L+ GDYLAI TL Sbjct: 75 GFMAVGAYTCALFTKYSNLPSGIAFVVGLVLACIVAGLFGVLIGIPALRLTGDYLAILTL 134 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + L + F+ I + + + Sbjct: 135 GFGEIIRITLNNIDDVLG--------------------FKLFYGAKGLKNIPKYSNFANV 174 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ I + ++ A IRDN+ A S + K+ AFA S+AF G+AG Sbjct: 175 FICVVITCFAIHAMMKSRHGRAVLAIRDNEIAAESCGIQTTYYKVMAFAFSAAFAGLAGG 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + P F F ++I ++ +V+LGGM S+ + +L + E + Y Sbjct: 235 LYACYLGVLDPSTFGFMKSIEILVMVVLGGMGSMLGSILSATVLTILPEATRSFDSY--- 291 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L L+++ R LL S Sbjct: 292 ------------RMVVYSLVLVLMMIFRPGGLLGSYDFSM 319 >gi|296272594|ref|YP_003655225.1| urea ABC transporter permease UrtB [Arcobacter nitrofigilis DSM 7299] gi|296096768|gb|ADG92718.1| urea ABC transporter, permease protein UrtB [Arcobacter nitrofigilis DSM 7299] Length = 531 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 97/303 (32%), Gaps = 21/303 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ A GL+I G + ++++ IGAY+ + + I + ++ Sbjct: 246 LSMGSVLLLAAIGLAITFGVMKVINMAHGELIMIGAYTTYTIQQLFPNLIEYSVIIAVPC 305 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + I+G+ + +L L + +L + + + Sbjct: 306 AFIVSGIVGILIERLVIRHLYGRPL------ETLLATFGVSLILQQLVRTIYSPLNQEVK 359 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 S + +S + Y+++ + +I+ +++T++ R + N+ + Sbjct: 360 TPSWMSGAWEVNSSLFLTYNRLYIVIFSVMVFLAILYVMKKTSLGLKVRAVSQNRPIARA 419 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + F + S G+AG + + + + +V+ GG+ +L Sbjct: 420 MGIKSSFIDAATFGIGSGIAGVAGVALSQLTNV--GPNLGQAYIVDSFMVVVFGGVGNLW 477 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L + + ++ ++ R L Sbjct: 478 GTLIAALTLGEINKFIEPISGAVLAKVIILVFIILFIQK-------------RPRGLFPQ 524 Query: 343 RTP 345 + Sbjct: 525 KGR 527 >gi|289643428|ref|ZP_06475548.1| inner-membrane translocator [Frankia symbiont of Datisca glomerata] gi|289506758|gb|EFD27737.1| inner-membrane translocator [Frankia symbiont of Datisca glomerata] Length = 434 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 137/318 (43%), Gaps = 31/318 (9%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------LGSRYGLSI 92 SM I IY + A GL++VVG GLL L + +AIGAY + + L+ Sbjct: 118 SMVNDIGIYALLALGLNVVVGYAGLLDLGYIAFFAIGAYVTAYFSSSSAMPWHAPFILNP 177 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + + P++ +++ G+I+G P+L+ RGDYLAI TL EI Q + ITNG G++ Sbjct: 178 FFVFPIALLLAALAGVILGAPTLRLRGDYLAIVTLGFGEIIQLLANNSDEITNGSRGVFG 237 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 L + + I + YY+LLG+ + L R+ I AW Sbjct: 238 VPHLS---------VDLPGIHYQWGIDPLPYYYLLLGIVAIVMIAFGRLERSRIGRAWAA 288 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR+++ A + + KL AFA+ ++ G AG A + +P F + +V+++ Sbjct: 289 IREDEIAAEATGVPTLRMKLLAFAIGASVSGFAGVLLATKQFF-NPQSFSLQLSFLVVAV 347 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 VI GGM S +L G+ D + +++ Sbjct: 348 VIFGGMGSRLGAVMGAVVLQGLAFYLR-------------DKVPPTDRYIYFGAVIIVMM 394 Query: 333 LMRSHSLLRLRTPSNFLE 350 + R L+ R +E Sbjct: 395 IFRPQGLVPSRRRRREIE 412 >gi|91789639|ref|YP_550591.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91698864|gb|ABE45693.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 361 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 98/343 (28%), Positives = 160/343 (46%), Gaps = 17/343 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V LL L L + + L+YV+ A GL+IVVG GLL L V + Sbjct: 6 LVTFFIVAAALLVLPLLLQQGGNAWVRIVDTALLYVLLALGLNIVVGYAGLLDLGYVAFF 65 Query: 75 AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 A+GAY + +LGS + L IW IP +A ++G G+++G P+LK R Sbjct: 66 ALGAYLFALLGSPHLAEAFPVIAAAFPEGLHLPIWAAIPAAAALAGFFGVVLGAPTLKLR 125 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + L N G +++ + L + F V Sbjct: 126 GDYLAIVTLGFGEIIRVFLNNLDRPINLTNGPKGINQIDSMKFFGFDLGKPHEFLGIEVN 185 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+ L + +S I L + I AW IR+++ A ++ KL AF + Sbjct: 186 SVSMYYYLFLVLVIVSVIICHRLENSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMG 245 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + F G++G+ FAA + +SP+ F E+I+++++V+LGG+ L + +L + E+ Sbjct: 246 ATFGGVSGSMFAAFQGFVSPESFSLMESIMIVAMVVLGGIGHLPGVILGALLLAALPEVL 305 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + ++ + L+ +A+ +V+LMR L Sbjct: 306 RHVAGP-LQAMTDGRLDSAILRQLLIALAMIVVMLMRPRGLWP 347 >gi|317047260|ref|YP_004114908.1| ABC transporter-like protein [Pantoea sp. At-9b] gi|316948877|gb|ADU68352.1| ABC transporter related protein [Pantoea sp. At-9b] Length = 822 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 126/311 (40%), Gaps = 32/311 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y + + V GL+I++G G +S + YA+GAY L Sbjct: 18 PFVLGSYALLVFSLFALAVTTVVGLNILLGLSGQISFGHIAFYALGAYISAALTMNGVPL 77 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + ++ ++ G G ++ +P+L+ G +LA+ T+ + + +++LI+W+ +T G G+ Sbjct: 78 G-VAMLLAMVVCGVIGGLLAIPALRVSGPFLAMITIAFALVVRHVLIEWRDVTGGSNGLM 136 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + I + + + ++ L+ + A R Sbjct: 137 GIPMP----------------DFGPLDANIGLALCCAVLMLAALALFARLQGSQWGLAMR 180 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 ++ ++ A SL + +K AFA+S+ AG+F A I+PD F F+++I+ + Sbjct: 181 AVKASEIAARSLGFNPVVSKTLAFALSAMLASAAGSFVAPLMMFINPDSFPFAQSILFVL 240 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 V++GG +L +++ + EL Y + + L V Sbjct: 241 AVVVGGSGTLFGPLLGALLIVVLPELLSSFAEY---------------RLLIFAMLLLSV 285 Query: 332 ILMRSHSLLRL 342 + + LL Sbjct: 286 LWLAPRGLLGT 296 >gi|62317708|ref|YP_223561.1| branched-chain amino acid ABC transporter ATP-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269691|ref|YP_418982.1| glutelin [Brucella melitensis biovar Abortus 2308] gi|189022965|ref|YP_001932706.1| branched-chain amino acid ABC transporter, ATP-binding protein [Brucella abortus S19] gi|254698998|ref|ZP_05160826.1| branched-chain amino acid ABC transporter, ATP-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|254732445|ref|ZP_05191023.1| branched-chain amino acid ABC transporter, ATP-binding protein [Brucella abortus bv. 4 str. 292] gi|260544949|ref|ZP_05820770.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260760244|ref|ZP_05872592.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260763482|ref|ZP_05875814.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|62197901|gb|AAX76200.1| branched-chain amino acid ABC transporter, ATP-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939965|emb|CAJ12994.1| Glutelin:ATP/GTP-binding site motif A (P-loop):Bacterial inner-membrane translocator:Tetracycline resistance protein:ABC tran [Brucella melitensis biovar Abortus 2308] gi|189021539|gb|ACD74260.1| branched-chain amino acid ABC transporter, ATP-binding protein [Brucella abortus S19] gi|260098220|gb|EEW82094.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260670562|gb|EEX57502.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260673903|gb|EEX60724.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] Length = 609 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 132/325 (40%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 22 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ G+S W + + I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 82 GYT-GVILFNMGISPWFSMFIGTFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 187 TWAARRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + + GG+ +++ +L+ + E L F Sbjct: 247 PAAMFSLAFSIQIAMFALNGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321 >gi|163733584|ref|ZP_02141027.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] gi|161393372|gb|EDQ17698.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] Length = 635 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 102/312 (32%), Gaps = 26/312 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ I L I Sbjct: 346 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFIPDYTLSILLAI 405 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ M++ G+ M +++ + + TL+ + L + G + Sbjct: 406 PLAFMVTFGAGVAMERLVIRW-LYHRPLETLLATFGVSIALQQLAKNIFGTQARPLTAP- 463 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V + A + ++RT + R + N Sbjct: 464 --------GWLDGSWVINDIVSISYIRIAIFFLALLFLALFLFVMKRTRLGLEVRAVTQN 515 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + S+ + F S G+AG S + V++G Sbjct: 516 PRMAASMGINPDKINMLTFGFGSGIAGIAGVAIGLYSKVTSE--MGSEYIVQSFMTVVVG 573 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ ++ + + +N S + T M++ + L I R Sbjct: 574 GVGNIWGTLLGATMVGTLQKGIEWLNP-----------SNTLAAQTYMILFIILFIQFRP 622 Query: 337 HSLLRLRTPSNF 348 ++ L+ + Sbjct: 623 RGIIALKGRAAE 634 >gi|269929014|ref|YP_003321335.1| ABC transporter-like protein [Sphaerobacter thermophilus DSM 20745] gi|269788371|gb|ACZ40513.1| ABC transporter related protein [Sphaerobacter thermophilus DSM 20745] Length = 631 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 121/312 (38%), Gaps = 29/312 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + YI + +++ + A +++V+G GLL+L Y IGAY+ +L G Sbjct: 24 PLVIADAYIHRLMATVVLAAVLAVSMNLVLGYGGLLALGHAGFYGIGAYTAALLSLHLGA 83 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +A + ++ P L RG Y A+A L + EI + W +T G +G+ Sbjct: 84 PFLVTALAAAAAAALVAWLVARPILHLRGHYFAMAMLAIGEIVVQVAYNWDSVTRGASGL 143 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + T + YY+ L + ++ + + + Sbjct: 144 PGISQPDLIVWTAVTHRDN--------------YYLALVLLLVAMLAVRRFVASPLGLGL 189 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 RD+ + S+ + + A A+++ G+AGA +A +S + F+ + I ++ Sbjct: 190 IAARDDDQGAASVGIGVAQTRTLALALAAGIAGVAGALYAHYITFVSVEPFQLEQTIALL 249 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++V +GGM + A+L + E+ + L L Sbjct: 250 AMVAVGGMGTTWGPVVGAALLTLLPEVLRDFAE---------------LRMVIYGALLML 294 Query: 331 VILMRSHSLLRL 342 V+ +R LL Sbjct: 295 VVWLRPQGLLGR 306 >gi|332531526|ref|ZP_08407425.1| inner-membrane translocator ABC transporter [Hylemonella gracilis ATCC 19624] gi|332039027|gb|EGI75454.1| inner-membrane translocator ABC transporter [Hylemonella gracilis ATCC 19624] Length = 880 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 15/287 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A +L+ A Y + Q+ + + GL++++G G +S V YAIG Sbjct: 22 IAAFLAVLVLGAGLALSLNGYWVFVLAQVALLAIVGVGLNVLIGLTGQMSFGHVGFYAIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL ++ G+S W+ P++A + CG ++ LP+L+ +G YLA+ T+ I ++ + Sbjct: 82 AYTVAILTTKAGVSFWVAWPIAAALGAVCGALLALPALRVKGPYLAMITIAFGFIVEHGI 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 ++ +T G+ GI G ++ + ++ G Sbjct: 142 VEAGALTGGQNGIMGISGPVLGGLAQGERAMALLAIAAAGLALALYAWLACGT------- 194 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 A R +RD + A S+ + K AFA+S+ AGA FA ++ Sbjct: 195 --------WGAAMRAVRDAETAAESIGLNPLVIKTVAFALSALCAAAAGALFAPLSGFVT 246 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 P F F+++I+ + +V+LGG S++ I+ + EL G+ Y Sbjct: 247 PHTFGFAQSILFVLVVMLGGAGSVAGPMIGAVIVGLLPELLSGLEEY 293 >gi|319792008|ref|YP_004153648.1| ABC transporter [Variovorax paradoxus EPS] gi|315594471|gb|ADU35537.1| ABC transporter related protein [Variovorax paradoxus EPS] Length = 633 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 111/323 (34%), Gaps = 10/323 (3%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + ++ L L ++ S+ I +Y + A GL ++ G G+ S +GAY Sbjct: 25 LTLVFVVALALAWGFLPEFTVSVLSNIGLYALVAAGLVMLTGVGGMTSFGQAAFVGMGAY 84 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + + + WL VS + G+ +GL L TL + + + Sbjct: 85 ATAWICTSPTAAAWLGGAVSPALLPWAGLALGLVFTFALAWALGAVTLKLQGHYLPLCTI 144 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + + G T + + + + V+ G+ L+ + Sbjct: 145 A---WGLSLYYLFGNMEFLGGQTGITGVPPLVVAGVSLATPRALGVVIWGVLLLALWAMH 201 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + A R ++ + S+ ++ F +++ ++G +A + ++P Sbjct: 202 NLLDSREGRAIRALKGGRLMAESMGVDTARHRIKLFVLAALLAALSGWLYAHLQRFVNPT 261 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F + I ++ + ++GG L A++ + E + + F Sbjct: 262 PFNLNIGIELLFMAVVGGAGHLWGAVLGAALITLLKEKLQDVLPALLGTSGNF------- 314 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 + + + V+ + L Sbjct: 315 EVIVFGLLMLFVLQRFADGLWPT 337 >gi|313903205|ref|ZP_07836598.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter subterraneus DSM 13965] gi|313466516|gb|EFR62037.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter subterraneus DSM 13965] Length = 346 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 74/341 (21%), Positives = 136/341 (39%), Gaps = 42/341 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + ++ ++ L A ++ +++ + I I V+ A L IV+G G S+ Sbjct: 7 RRAAAVAAGLILIYAVVQFLLTARILDRFYENVLMNIGINVLAAVSLHIVLGLAGQFSIG 66 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 A+GAY+ +L + + + + A+ + G+++G+PSL+ RGDYLAI TL Sbjct: 67 HAGFLAVGAYTSAVLTQKLDMPFAVALLAGALAALLVGLVVGIPSLRLRGDYLAIVTLGF 126 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 +EI + IL+ + + + + + L Sbjct: 127 AEIVRIILLNVEYVGGAA---------------------------GMRVSHLTSWTALYV 159 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + R+A A +R+++ A ++ K+ AFA+S+ F G+AG Sbjct: 160 SVVAAILVTVHFTRSAHGRATLALREDEIAAAAMGVNTTTYKVMAFALSAFFAGLAGGLH 219 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + I P F F ++ ++ V+LGG+ SL A L V Sbjct: 220 AHNFYVIQPSNFGFLKSFEILVFVVLGGIGSLPGAILAATFLTLVSIGLQAY-------- 271 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L + L LV+L R L R+ + F Sbjct: 272 -------PEVRMILYSLVLILVMLFRPQGLWGTRSITGFFP 305 >gi|126665641|ref|ZP_01736622.1| ABC-type branched-chain amino acid transport system [Marinobacter sp. ELB17] gi|126629575|gb|EBA00192.1| ABC-type branched-chain amino acid transport system [Marinobacter sp. ELB17] Length = 335 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 134/323 (41%), Gaps = 17/323 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V+ ++ L S + S+ QI + GL+++VG G +SL + +GAY Sbjct: 13 LVFLAIVVFALPLFISNPFHYSLATQIALIAGAVVGLNLLVGFAGQISLGHAGFFGLGAY 72 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 I+ S YG S + V A G ++G P L+ +G YL++ATL + I IL Sbjct: 73 FSAIMTSHYGWSAIPALIVGAFGVGIIAWVVGRPILRLKGHYLSMATLAVGFIIAIILNN 132 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + +T G G+ V + + S + + ++ Y + ++ + Sbjct: 133 EREMTGGPDGMPV--PAFDVFGWELSPFGQYSLFGMDISGDLAWYLFAGVVLLVAVWLAQ 190 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + I A R++ ++ A + K F +S+ + + GA +A + I+P Sbjct: 191 NLIDSPIGRALRSVHGSEVAASVVGVNTTKYKSLVFVISAVYASVMGALYAHFQGFITPA 250 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + F +I++I++V+LGGM S + +L + ++ + Sbjct: 251 VAGFEFSILLITMVVLGGMGSTIGVIIGAVVLELLPQVLADFQEF--------------- 295 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 L + L L ++ LL Sbjct: 296 EMVLFGLILMLTMIFMPKGLLPT 318 >gi|121611012|ref|YP_998819.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121555652|gb|ABM59801.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 358 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 138/320 (43%), Gaps = 20/320 (6%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L L L Q+Y + +LIY + GL ++ G GL SL +GAY+ Sbjct: 27 LLCLALVLAPWVVQEYWLAQLSFVLIYAIVGLGLMLLAGFTGLFSLGHAAFLGVGAYTQA 86 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 L L + +A +S A G ++GLP+L+ +G YL +ATL I + + +W+ Sbjct: 87 GLTGIGWP-FALALVCAAALSAAAGWVVGLPALRVKGIYLGMATLSFGFIVEELFARWES 145 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G AG ++A + + +++ LG+ + +L L Sbjct: 146 VTGGNAGKHLAPPQVW---------------GLSLESGTAFHFLCLGLTVVCTLAVLNLL 190 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ A+ IRD++ + S+ + K +F++S+A G+ GA +A ISPD F Sbjct: 191 RSPTGRAFVAIRDSEISAQSMGIHLARYKTLSFSLSAALAGIGGALYAHKLQFISPDQFG 250 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 ++I ++ +V++GG+ S+ LI + +L + ++ + Sbjct: 251 IMQSIDLLLMVVVGGLGSVHGAFLGALFLIAMPQLIALGKDWLPATIGQ----APGLQAV 306 Query: 323 LMVIALFLVILMRSHSLLRL 342 + L +L L Sbjct: 307 VYGAVLIAFVLFEPMGLYGR 326 >gi|326333092|ref|ZP_08199341.1| high affinity branched-chain amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] gi|325949075|gb|EGD41166.1| high affinity branched-chain amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] Length = 364 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 137/319 (42%), Gaps = 10/319 (3%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI----LGSRY 88 S +Y+ + ++ + + A GL+++ G G LSL A+GAY+ + G Sbjct: 35 GTSSQYLQTRYAEMAYFAIAAGGLTLLTGLSGQLSLGHGALMAVGAYAATLVLERTGGET 94 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 +++ + V+ + G+++G+P+ + G Y+A ATL ++ + +W + + Sbjct: 95 LADVFVALLVAIAVCAVVGVVVGVPAARLHGPYIAGATLTLAVAVPRLANQWAVLGGEQG 154 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 R L ++ LI F F + + F+ Y+ + L+ + L R+ + Sbjct: 155 LQVPVPRASELPAWIQDLIWF--FTAVEIDQYSFLAYLGWLLLVLTFVALANLSRSRVGR 212 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 WR +RD+ + + A++ AF VS+ G+AG A + +P F + ++ Sbjct: 213 RWRAVRDDDVSAELAGIHLGRARVVAFTVSAMCAGLAGGLMAMNVRLTAPGAFTITLSLT 272 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 +++ V+LGG+ SL+ +L + + S + + + L Sbjct: 273 LLAAVVLGGLGSLTGALIGAGVLAFLPHFATDLGESAGLSATQAAEVTP----VVYGLVL 328 Query: 329 FLVILMRSHSLLRLRTPSN 347 LVIL+ ++ P Sbjct: 329 MLVILLAPAGIVGSLRPLL 347 >gi|239906879|ref|YP_002953620.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239796745|dbj|BAH75734.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 348 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 86/307 (28%), Positives = 144/307 (46%), Gaps = 8/307 (2%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y+ + + I++Y++ A GL+I+ G GLL L V Y IGAY+ +L Y +S W Sbjct: 24 FRDVYVLHVLVLIMVYMVLAMGLNILPGFCGLLDLGFVGFYGIGAYTAGLLTIHYNMSFW 83 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L++P++ + G+++G P+L+ GDY AI T SE+ L +T G GI Sbjct: 84 LIVPLAVLNGALFGVLLGAPTLRLVGDYFAIVTFGFSELVVLFLTNEIWLTRGPLGIPGI 143 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + T + +L+ E+ YY+ + M L ++ + + + AW I Sbjct: 144 APISLDVTWLATLLGVDERWRYAFRGEVPYYYLAMVMVGLVFVVMTRVEDSRLGRAWLAI 203 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R++ A S + K+ AFAVS+ +AGAF A ISPDMFKF E+ +V+ +V Sbjct: 204 REDPMAAASCGVNLFAYKVIAFAVSTGIGALAGAFLARWTLFISPDMFKFWESFLVLCMV 263 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ ++ + ILI + E+ + + +++ Sbjct: 264 VLGGLGNIRGALVGSTILIALGEVLRVALPKLG--------LPAETRFLAYGLIMVVIMR 315 Query: 334 MRSHSLL 340 R H L Sbjct: 316 FRPHGLF 322 >gi|168699519|ref|ZP_02731796.1| inner-membrane translocator [Gemmata obscuriglobus UQM 2246] Length = 380 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 84/349 (24%), Positives = 152/349 (43%), Gaps = 9/349 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + + LL + + + I +L +V+ A GL++VVG GLL L Sbjct: 5 RGALGYWMVAGFVLLAAVPFLPYRDAPIYGTQAIPVLCFVILALGLNVVVGYTGLLHLGI 64 Query: 71 VIAYAIGAYSYVILGS---RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + IGAY+ +L + +G S ++ SA+ + A G+ P+L+ RGDYLA+ TL Sbjct: 65 AAFFGIGAYTAGVLTTTAFPFGSSFVVVAVASALAAAAVGVATTAPTLRLRGDYLALVTL 124 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 I ++ IT+G G+ +F G L + S+ ++YY+ Sbjct: 125 GFGLITIYVIRNLAAITDGTQGLTPVAPDFFPGIDDPVLPKSRPGWSNSWRKYPYLYYLC 184 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 LG+ + L R+ + AW +R+++ A + KLSA A+ + G+AGA Sbjct: 185 LGLLAAVVVFLRNLERSRLGRAWVALREDELAASCMGLNPARLKLSAIALGAGLAGLAGA 244 Query: 248 FFAASRD-RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA S++ P + F ++I + VILGG+ + + +L+G ++ + + Sbjct: 245 LFAVSQNGTTEPKAYGFERSMIALCCVILGGLGNRPGVILGVVLLVGYDQILTPLLDNWL 304 Query: 307 NSLLKFD-----CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + +AL L++ +R LL L Sbjct: 305 QAQKLNPNGKEYLKVSGWRLCIFGLALILMMRLRPEGLLPSARQKRELH 353 >gi|121609944|ref|YP_997751.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121554584|gb|ABM58733.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 358 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 90/339 (26%), Positives = 159/339 (46%), Gaps = 17/339 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL L L + L+YV+ A GL+IVVG GLL L V YA+GA Sbjct: 9 IIGAIALLVLPLLLQSLGNAWVRIADLALLYVLLALGLNIVVGYAGLLDLGYVAFYAVGA 68 Query: 79 YSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 Y + ++ S + S+WL+IP++A+++ G+++G P+LK RGDYL Sbjct: 69 YLFALMASPHLADNFAAFAALFPHGLHTSLWLVIPLAALLAAFFGVLLGAPTLKLRGDYL 128 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + L N G ++ + L + + Sbjct: 129 AIVTLGFGEIIRIFLNNLDHPVNLTNGPKGLGQIDSVKFLGLDLGKRLELFGWHINSVTL 188 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY+ L + LS I L+ + I AW IR+++ A ++ KL AF + ++F Sbjct: 189 YYYLFLALVLLSIVICWRLQDSRIGRAWMAIREDEIAAKAMGINTRDMKLLAFGMGASFG 248 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G++GA F+A + +SP+ F E+I+++++V+LGG+ + + +L + E+ + Sbjct: 249 GVSGAMFSAFQGFVSPESFSLMESIMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYVA 308 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + L+ +A+ +++L+R L Sbjct: 309 GP-LQAMTDGRLDSAILRQLLIALAMIVIMLLRPRGLWP 346 >gi|187476994|ref|YP_785018.1| branched-chain amino acid ABC transporter permease [Bordetella avium 197N] gi|115421580|emb|CAJ48090.1| putative branched-chain amino acid ABC transporter, permease protein [Bordetella avium 197N] Length = 593 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 128/307 (41%), Gaps = 25/307 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + + I +Y A +IV G G LSL + Y +G+Y+ +L +G+S W+ Sbjct: 29 SPFAYHLFVLICLYGALATAWNIVGGYAGQLSLGHAVFYGVGSYAATLLVINFGISPWIG 88 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + V ++ +++ P+ + RG + A+AT+ + E+ + +++ T G AG+ V Sbjct: 89 MFVGMALAALVALLISYPTFRLRGPFFALATIAVLEVVKLLVVNQDSWTGGAAGLSVPLN 148 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + R V GM ++ + +R + + +R+ Sbjct: 149 IGLEWMIFREKW--------------AYLLVAFGMLAITIWVAWAIRHSRLGFYLVAVRE 194 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVI 274 + A ++ + KL+A +S+ M G+F A I P F +I + + Sbjct: 195 REYAAPAVGIDTVRVKLAAAVISAMLTAMVGSFHAMYLTFIEPSAAFSLELSIQIAMFAL 254 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG+ S++ T +++ + EL G + + + F + + L LV+L Sbjct: 255 IGGLGSVAGPLAGTVLVVPIAELARGWLGAFGSGMHGF----------IYGVILVLVVLT 304 Query: 335 RSHSLLR 341 ++ Sbjct: 305 MPRGIVG 311 >gi|226311263|ref|YP_002771157.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226094211|dbj|BAH42653.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 323 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 132/320 (41%), Gaps = 18/320 (5%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + IL+ + A + I + S G LSL +IGA++ IL + + ++ Sbjct: 6 ILNPYNLQVLTFILLNSILAISIYITL-STGQLSLGHAGFMSIGAFTASILTKQADMPLF 64 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151 + I + +++G +++G P+LK G YLAIATL E+ + I + + G G+ Sbjct: 65 IAIIIGGLVAGLIALLIGAPTLKLHGLYLAIATLGFGEVIRVIFLNMEMTNGALGLTGLQ 124 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + S I + + +L + + L L R+ + A+ Sbjct: 125 SIGNYLYDFEKAMGVKAQTFGISVMQIKSLSTFVFMLLLFAFVLFLTLRLNRSRLGRAFE 184 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 I+ ++ A ++ + + K+ AF + S G+ G FA I+PD F + + + ++S Sbjct: 185 AIKADETAARAMGLQVNYYKMLAFVIGSILAGVCGGLFAHITTTITPDDFNYHKVVEILS 244 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 ++GG + +L + E+ G+ Y + + + V Sbjct: 245 YAVIGGSEVVWGPLFGAFVLTALPEVLRGLAEY---------------KMLMYGLIMVGV 289 Query: 332 ILMRSHSLLRLRTPSNFLER 351 + R H L+ T +R Sbjct: 290 MAFRPHGLIGADTFQKLFKR 309 >gi|302335542|ref|YP_003800749.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Olsenella uli DSM 7084] gi|301319382|gb|ADK67869.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Olsenella uli DSM 7084] Length = 377 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 66/338 (19%), Positives = 117/338 (34%), Gaps = 19/338 (5%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 I +L + + L + +Y S+ Q+ IYV+ A L+I G LG L L Sbjct: 32 RYVINAVLVAAFIAIGELMIDGGAITRYQTSVLEQVGIYVIMAVSLNIATGYLGQLPLGH 91 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 ++G YS I R + + + M L + A + Sbjct: 92 AGFMSVGGYSCAIFIMRMSDVMGVG---ARDFVTGAPAAMALFVCGLAFGGVCAAICGVI 148 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV-LLG 189 + +K + G R+ L + +V Sbjct: 149 IGIPALRLKGDYLAIITLGFAEIIRVIMLNIDGVLGFDLTGGAKGLTGIPSYTSFVNTFV 208 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + +S +I + ++ A IRDN+ A + + K AF VS+ F G+AG + Sbjct: 209 IVAISLFLIHTMMKSRHGRAILAIRDNEIAAEASGVHTTYYKTLAFVVSAFFAGIAGGLY 268 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A ++P F F ++I V+ +V+LGGM S+ + +L + E Y Sbjct: 269 AGCIGVMAPAKFGFMKSIEVLVMVVLGGMGSMLGSVVSATVLTVLPEALRAFADY----- 323 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +V++ R + S Sbjct: 324 ----------RMVVYAVVLIIVMIFRPQGFMGTYDFSL 351 >gi|239625583|ref|ZP_04668614.1| ABC transporter ATPase component [Clostridiales bacterium 1_7_47_FAA] gi|239519813|gb|EEQ59679.1| ABC transporter ATPase component [Clostridiales bacterium 1_7_47FAA] Length = 333 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 130/288 (45%), Gaps = 14/288 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + L+ + S Y ++ Q++I ++ +GL+ + G G ++L YA+G Sbjct: 18 AMMASAFLILALVPLFMSNNYYITILNQMVINMIVVFGLNFITGLAGQMNLGTAGIYALG 77 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L +GLS WL + + ++ G +G PSLK +G YL++ TL SEI + + Sbjct: 78 AYTSALLSRNFGLSPWLTMVAALVVGFLIGRGLGYPSLKMKGVYLSLTTLAFSEIIRILA 137 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 IT G GI R L + + ++ +Y + + L + Sbjct: 138 TNLMDITGGTQGIKNIPRFRVLFWNLDTNVK--------------YFYFVWTVAVLLCLL 183 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + ++ ++DN +A SL I K+ AF +++ + + GA +A ++ Sbjct: 184 SMRIAHSKWGREFKAVKDNVEAIESLGLDIKKIKIRAFTLAAVYGALGGALYAHFNQFVT 243 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 F +I + ++++GG+ ++ ++ + E+ + YY Sbjct: 244 SLSFTTDLSISYVIMLMIGGIGNILGNIIGAIVITILPEMLRFLGDYY 291 >gi|330966513|gb|EGH66773.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. actinidiae str. M302091] Length = 287 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 148/297 (49%), Gaps = 23/297 (7%) Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 GLL L V YA+GAYSY +L YGL W+ +P++ M+S G ++G P L+ RGDY Sbjct: 1 MAGLLDLGYVGFYAVGAYSYALLSHYYGLGFWICLPIAGMMSALFGFLLGFPVLRLRGDY 60 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFP 173 LAI TL EI + L +T G GI D+ F G T ++ +F P Sbjct: 61 LAIVTLGFGEIIRIFLRNLTELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEYFGLP 120 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + +F+Y + L + + +I L R I AW +R+++ A +L KLS Sbjct: 121 YNSINKVVFLYLIALLLALAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLS 180 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF + +AF G AG+FFAA + ++P+ F F E+ I+++IV+LGGM S + A ++I Sbjct: 181 AFTLGAAFAGFAGSFFAARQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMIL 240 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + EL + Y + + L+++ R L ++ P L+ Sbjct: 241 LPELMREFSDY---------------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 282 >gi|302562408|ref|ZP_07314750.1| branched-chain amino acid ABC transport permease [Streptomyces griseoflavus Tu4000] gi|302480026|gb|EFL43119.1| branched-chain amino acid ABC transport permease [Streptomyces griseoflavus Tu4000] Length = 379 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 126/330 (38%), Gaps = 7/330 (2%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 AV+ L + L L + +G+ + + A GL+++ G+ G LSL A+GA Sbjct: 14 AVLPLLAVVLCLPPFYLDAFWLRIGLFSMAAAIGAVGLALLSGTAGQLSLGHAFFLAVGA 73 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL--PSLKFRGDYLAIATLIMSEIFQNI 136 Y Y L G + + + A + + +G YL IATL + + ++ Sbjct: 74 YGYAWLAGEPGPGLPPALAALLAVLLAGAAGGLFSPVAARVKGIYLGIATLALVFLGHHV 133 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L+ +T G G L G E ++++ L + + Sbjct: 134 LLTADSVTGGFNGRS-VPPLTLGGFAFTESDPELTVLGVPFGAEERLWFLGLALFAFTWF 192 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L+R A +RD++ A + + + +AF VSS + G+AG A + R+ Sbjct: 193 TARGLQRGRPGRALAALRDSETAASVMGVDVARHRSAAFVVSSMYAGLAGVLLALAFRRV 252 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKF 312 PD F + ++ ++++++GG+ S++ + + L + Sbjct: 253 VPDYFSLALSVDYLAMIVIGGLGSVAGATAGAVFVTALPLLMTRYADQLPLVTAPGSAEG 312 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L A+ LV+L L L Sbjct: 313 AVGPTEAARYLYGAAIVLVLLYAPDGLHGL 342 >gi|119946608|ref|YP_944288.1| ABC transporter inner-membrane translocator [Psychromonas ingrahamii 37] gi|119865212|gb|ABM04689.1| ABC transporter inner-membrane translocator [Psychromonas ingrahamii 37] Length = 547 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 102/312 (32%), Gaps = 21/312 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + ++ A GL+I G +G++++ +GAY+ ++ + I + Sbjct: 257 DYLFFGLSMGSVLLLAAIGLTITFGVMGVINMAHGEMMMLGAYTTYVIQQTFPNLIEYSL 316 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + ++G+ + +L L + +L + + + Sbjct: 317 LMAVPAAFLVSGLVGVLIERGVIRFLKGRPL------ETLLATFGISLILQQLVRTVFSP 370 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + Y+++ + S+++ L+++++ R + N Sbjct: 371 LNRQVEAPQWMSGSLEINPIFSLTYNRLYIIIFALMVFFSLLMILKKSSLGLHVRAVSQN 430 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L+ + F + S G+AG + + I +V+ G Sbjct: 431 RDMARALSIKSSWVDAITFGLGSGVAGIAGVALSQLTNV--GPNLGQDYIIDSFLVVVFG 488 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL A L + + ++++ L L I R Sbjct: 489 GVGSLWGTLVAAMTLGTFNKFLE-------------PSMGPVLANIIVLVGLVLFIQKRP 535 Query: 337 HSLLRLRTPSNF 348 L + S Sbjct: 536 KGLFPQKGRSAE 547 >gi|311109141|ref|YP_003981994.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310763830|gb|ADP19279.1| inner-membrane translocator 61 [Achromobacter xylosoxidans A8] Length = 588 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 64/337 (18%), Positives = 128/337 (37%), Gaps = 37/337 (10%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++L+K L + A+ + + + I +Y + A G +I+VG G Sbjct: 1 MKLSKILIPLVIAALAIG------YAYSGLNDFYLLILFNIGVYYIAATGFNILVGQTGQ 54 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 SL + +GAY+ +L Y + WL + +A++S G+++ +P+LK +G LA+ Sbjct: 55 KSLGHAGLFGVGAYTVALLTVNYQVDPWLALACAAVVSAVFGVVIAIPALKVKGPSLAMV 114 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 T+ + + I+ +W + G+ G Y L F G T+ S + Sbjct: 115 TIAFGLLIEKIVSEWTDVFKGQEGFYGITGLTFGGATLDSRQWVVVVVVLGLALHAMTSL 174 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +L + +R ++ A S+ ++ K+ AFA+S+ G+A Sbjct: 175 LL---------------NGRFGRGFAAVRTSEIAAESVGISVYRFKILAFAISAITCGIA 219 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G A I+ D F+ ++ + +V+ GG + + +L + + Sbjct: 220 GGLVAQQNQYINSDFVNFNLSVFFLVLVLFGGR-TPAGSFLGAVVLTVIDAMLAR----- 273 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L + L L Sbjct: 274 ----------WPEVQHFAYGLILLFALYAMPEGLAGL 300 >gi|326789584|ref|YP_004307405.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM 5427] gi|326540348|gb|ADZ82207.1| ABC-type transporter, integral membrane subunit [Clostridium lentocellum DSM 5427] Length = 359 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 85/361 (23%), Positives = 146/361 (40%), Gaps = 45/361 (12%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + L+K ++ L + L++FLF+ KY+ + IY + A +++V G G Sbjct: 3 KINLSKKTNMILSLIAIAVLIIFLFIAEPVFGKYVSRIIKLSAIYAICALSMNMVNGFTG 62 Query: 65 LLSLNCVIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGA 105 L SL AIGAY+ IL L + + + +++ A Sbjct: 63 LFSLGQPGFMAIGAYTTAILTLTQSDKQSVFYMSPMPAFLESAHLPFIVALVLGGLLAAA 122 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 C I+G P L+ RGDYLAIATL SEI + IL + ITNG GI Sbjct: 123 CAYIIGFPVLRLRGDYLAIATLGFSEIIRVILQNMQNITNGPLGINKIPNH--------- 173 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 ++ G+ + +L + +T+ A + IR+++ A ++ Sbjct: 174 ----------------VSMWMAFGVLAIITIFMLVMMKTSYGRALKAIREDEVAAEAMGV 217 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + K+ AF +S G+AG + I P FKF+ ++ +V+LGG S+S Sbjct: 218 NLFKHKMLAFVLSGFIAGIAGGLLGSLVGAIDPTQFKFTFAYTLLLMVVLGGQGSISGSI 277 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 I+ E+ ++ + + + + L +IL S + + Sbjct: 278 VGAFIITCAQEILRFVDEPINFGFIHYP-GIEGMRMVVFSVMLMCIILFWSRGIFGNKEF 336 Query: 346 S 346 S Sbjct: 337 S 337 >gi|288960159|ref|YP_003450499.1| ABC transporter ATP-binding [Azospirillum sp. B510] gi|288912467|dbj|BAI73955.1| ABC transporter ATP-binding [Azospirillum sp. B510] Length = 578 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 72/307 (23%), Positives = 124/307 (40%), Gaps = 29/307 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + +Y + A+G IV G G LSL + +GAY ILGSRYGL Sbjct: 29 SPYGLRVLTVAGVYALAAFGFQIVFGLGGALSLAQGAFFGVGAYVTGILGSRYGLGFEAT 88 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 P+S ++ + +GL L+ Y A+ATL ++++ + + +T G G+ Sbjct: 89 FPLSLLVPLLLALPVGLAVLRLESHYFALATLGIAQVLHLLAVNLPELTGGSNGLAGVPA 148 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 G V + ++ G+ L I L R A +RD Sbjct: 149 AVLFGWAVPRGLPMAG--------------LVWGLVALGGLIGWRLSRGRFGRALTMLRD 194 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A +L + +L+AF VS+ F G AGA ++ +SP++ +F I +++I I+ Sbjct: 195 DPLAAGTLGLDVGRLRLAAFGVSALFGGAAGALAVHTQRVVSPEVLEFPVMISILTIAIV 254 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ +L+ + E + Y + AL +++ Sbjct: 255 GGRGRMAGAVLGAVLLLHLPEWFRFLERGY---------------LVVYGAALLATVVLA 299 Query: 336 SHSLLRL 342 L L Sbjct: 300 PDGLTGL 306 >gi|167750014|ref|ZP_02422141.1| hypothetical protein EUBSIR_00982 [Eubacterium siraeum DSM 15702] gi|167657035|gb|EDS01165.1| hypothetical protein EUBSIR_00982 [Eubacterium siraeum DSM 15702] Length = 369 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 135/335 (40%), Gaps = 23/335 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 K ++ + +++ + ID + + + +Y + A L++ VG LG L Sbjct: 15 PQTKKSFTTYIMVTLAFVIMMILSSTGNVSSQIDGLLVPLCVYSILAVSLNLTVGILGEL 74 Query: 67 SLNCVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL +GAY+ + + L I V + + G+++G+P L+ G Sbjct: 75 SLGQAGFMCVGAYASALFSLATKETILVEWVRFPLAILVGGIFAAIFGILIGIPVLRLNG 134 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +N+ + G+++A + + Sbjct: 135 DYLAIVTLAFGEIIKNVFAAL-YVGVDSKGLHIALNQADMNLEADGTEIIRGALGVKGVP 193 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + V + ++ I + A + IRDN A S+ I KL FA+++ Sbjct: 194 NDSSFVVGFILLLITLIISYNYINSRTGRAVKAIRDNSIAAESVGLNITKYKLITFALTA 253 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 G+AGA ++ + + F ++ +I+++ V+LGG+ ++ A +L + EL Sbjct: 254 FLAGIAGALYSHNYATLQASKFDYNLSILILVFVVLGGIGNIRGSVIAAVVLTLIPELLR 313 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +N Y + I L +++++ Sbjct: 314 SINSY---------------RMLIYSIVLIVMMIL 333 >gi|83594836|ref|YP_428588.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] gi|83577750|gb|ABC24301.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] Length = 373 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 68/351 (19%), Positives = 144/351 (41%), Gaps = 27/351 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGAT--------KSQKYIDSMGIQILIYVMFA 53 IF +++ + L A+ ++L + Y S+GIQ+ Y + A Sbjct: 21 KIFDTPTSRWAMVGFLCALYGLVILPQAFPPLASLPVLRLFADGYALSLGIQVCYYAIAA 80 Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113 GL+I+VG G +SL + +GA+S L +R GL + + IP++ ++S A G++ G P Sbjct: 81 LGLNILVGFTGQISLGHAAFFGVGAFSSAWLNTRVGLPVLVCIPLAGLMSAAAGLLFGAP 140 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 + + +G YLAIATL I +++ ++ T G +G + Sbjct: 141 AARIKGLYLAIATLAAQFIIEDLFVRMDWFTGGSSGAMADTPMLGSFAFDNDARY----- 195 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + L + + L R+ A+ +RD+ + + + ++ Sbjct: 196 ----------FLLSLSFTIVLFVMAANLMRSRDGRAFVALRDHYLSAEVMGIALTRYRVM 245 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 +F +++ + G+ GA + +S + F +I + ++I+GG+ S+ T ++ Sbjct: 246 SFGIAAFYAGIGGALYGHYLMFVSAEAFTILLSIQFLGMIIIGGLGSVMGAMLGTIFMVA 305 Query: 294 VVELCCGMNFYY----FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + E+ + + + + A+ L ++ L Sbjct: 306 LPEVMGAVIAALQTTQWGNRPAVINGLPFFREMAIGAAIILFLIFEPDGLA 356 >gi|221194504|ref|ZP_03567561.1| ABC-type branched-chain amino acid transport system, permease component [Atopobium rimae ATCC 49626] gi|221185408|gb|EEE17798.1| ABC-type branched-chain amino acid transport system, permease component [Atopobium rimae ATCC 49626] Length = 378 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 119/344 (34%), Gaps = 19/344 (5%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 L + + I L+ V+ +G +Y + Q+ IYV+ L+IV G LG Sbjct: 25 HLSMTQRYLINALVVAVFIFGGNALVGEGIISRYQTVILEQVGIYVLMTVSLNIVTGYLG 84 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L L +IG Y+ I R + L + A+ S L + Sbjct: 85 QLPLGHACFMSIGGYACAIFIIRVMPLVGLSVTDMALGSAPAIA---LFVSGLLFGGVVA 141 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 + + +K + G R+ + + S + Sbjct: 142 GLAGVIIGIPALRLKGDYLAIITLGFAEIVRVVLINIDATLGFKLTGGASGLTGIPAYTS 201 Query: 185 YV-LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 ++ + LS +I L ++ A IRDN+ A + + K AF S+ G Sbjct: 202 FLNTALVVALSIFLIHTLMKSRHGRAILAIRDNEIAAEASGVNTTYYKTLAFVFSAFLAG 261 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 +AG +A ++P F F +++ ++ +V+LGGM S+ + +L + E Sbjct: 262 IAGGLYAGCIGVMAPAKFGFMKSVEILVMVVLGGMGSMFGSVISATVLTILPEALRAFAD 321 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 Y + L LV++ R L S Sbjct: 322 Y---------------RMLAYAVVLILVMIFRPKGLCGSYDFSL 350 >gi|149378160|ref|ZP_01895878.1| ABC-type transporter, permease component: HAAT family protein [Marinobacter algicola DG893] gi|149357564|gb|EDM46068.1| ABC-type transporter, permease component: HAAT family protein [Marinobacter algicola DG893] Length = 343 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 131/320 (40%), Gaps = 28/320 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L + + +Y + ++ + +GL+I+ G G L+L +AIGAY+ Sbjct: 16 LMLAFAILFPLVAANEYQVYVMATAFVWAIAVYGLNIITGFCGQLNLAHGGFFAIGAYTL 75 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L + YG S W + +++ G ++G+ SL+ + Y AI TL + I ++ KW+ Sbjct: 76 GLLTADYGWSFWPAFLGALVMTAVLGFLVGIVSLRLKEHYFAIFTLCVGFIIYLLIDKWE 135 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T+G G+ + F YY++L + + L Sbjct: 136 ELTHGAIGVRDIAAP-------------YGFGLVDFTDTTPFYYLVLAFLVFAIWFMGRL 182 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 ++ + + IR+ + SL ++ K+ AF +S+ + G+AGA +A I P+ Sbjct: 183 SKSLLGRTFIAIRNGDELAQSLGINLMRNKVLAFVLSTTYAGLAGALYAGMVRFIGPEEA 242 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + +I+ +++GG+ ++ T ++ + + + Y Sbjct: 243 NINHTFDMITYLLVGGIGTIMGPLLGTVGIVWITQSLQFLEEY---------------RM 287 Query: 322 TLMVIALFLVILMRSHSLLR 341 + L L+++ + Sbjct: 288 IIFGPLLVLLVIFFPRGITG 307 >gi|257438526|ref|ZP_05614281.1| high affinity branched-chain amino acid ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] gi|257199105|gb|EEU97389.1| high affinity branched-chain amino acid ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] Length = 337 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 72/340 (21%), Positives = 137/340 (40%), Gaps = 39/340 (11%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ + V + +L Y + + + + I ++ A L++ G LG L L Sbjct: 13 RYLMNAVLVALLFVALSYLTRNILSTYQNKVLMTVGINIILAVSLNVATGYLGQLPLGHA 72 Query: 72 IAYAIGAYSYVILGSRYGLS----IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 A+GAY+ + L + + ++ +++G G+++G+P+L+ GDYLAI TL Sbjct: 73 GFMAVGAYTCALFTKFCPLPDGVSFAIGLVLACIVAGLFGVLIGIPALRLTGDYLAILTL 132 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + L + F+ I + + + Sbjct: 133 GFGEIIRITLNNIDDVLG--------------------FKLFYGSKGLKNIPKYSNFTNV 172 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ +I + ++ A IRDN+ A S + K+ AFA S+AF G+AG Sbjct: 173 FLCVVITCFLIHAMMKSRHGRAVLAIRDNEIAAESCGIQTTYYKVMAFAFSAAFAGLAGG 232 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A ++P F F ++I ++ +V+LGGM S+ + +L + E + Y Sbjct: 233 LYACYIGVLNPSTFGFMKSIEILVMVVLGGMGSMLGSILSATVLTILPEATRSFDSY--- 289 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L L+++ R LL S Sbjct: 290 ------------RMVIYSLVLILMMIFRPGGLLGSYDFSM 317 >gi|297616859|ref|YP_003702018.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM 12680] gi|297144696|gb|ADI01453.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM 12680] Length = 301 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 68/316 (21%), Positives = 125/316 (39%), Gaps = 41/316 (12%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + I I ++ A GL+++ G G LS+ +IGAY+ IL G W Sbjct: 13 DAYYLRILILFGINIILALGLNLITGVTGQLSMGHAGFMSIGAYTSAILSLHTGAPFWSC 72 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + A+++G G+++G+P+L+ GDYLA+ T+ +EI + + + + G+ Sbjct: 73 LVAGAVVAGMFGVLIGVPTLRLEGDYLAMVTIGFAEIVRVVFLNL-DVAGKAIGLSGIPS 131 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + L ++ + A IR+ Sbjct: 132 HTGFVN-------------------------VWAVALAVIIANWQLLKSRVGIALYAIRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + K+ AFAV S G+AG F+A I+P F F ++I ++++V+L Sbjct: 167 DEIAAEASGVNTTLYKIGAFAVGSFLAGIAGCFYAHFITYINPQDFGFMKSIEILNMVVL 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ +L E+ + Y L ++++ R Sbjct: 227 GGMGSIPGTILGAFVLTLAPEMLRVVQEY---------------RLLFYGALLVIMMIFR 271 Query: 336 SHSLLRLRTPSNFLER 351 + LL +R Sbjct: 272 PNGLLGDVRWHEIRKR 287 >gi|225350883|ref|ZP_03741906.1| hypothetical protein BIFPSEUDO_02457 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158339|gb|EEG71581.1| hypothetical protein BIFPSEUDO_02457 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 377 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 75/345 (21%), Positives = 139/345 (40%), Gaps = 42/345 (12%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + +V +L Y+ + + I V+ L++ +G LG L+L C Sbjct: 14 YALCAIGVLVLFGILVAVCETGAISLYVKGILMTCCIAVIMTTSLNLTIGVLGQLTLGCC 73 Query: 72 IAYAIGAYSYVILG---------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 AIGAYS ++ + L+ V +++ G+++G+P+L+ GDYL Sbjct: 74 GFEAIGAYSAALMSKLLVANGVQMDDTVRFLLVTFVGGVVACVFGVLVGIPALRLHGDYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + I+ K + L + + I + Sbjct: 134 AIITLGFGEIIRVIIQNLKVAGG------------------KGLADGQQGQALIGIDRLA 175 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YV+ + ++ ++ R+ A + IRD++ A + I + K+ FA+S+ F Sbjct: 176 NLYVVFCITVVTVVLLFMFARSRYGRAVKAIRDDEIAAGASGINITYMKVLVFAISAFFA 235 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AG FA ++P M + ++I + +V+ GGM SL+ A L + EL + Sbjct: 236 GIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVAAVGLTILPELLRAFS 295 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 Y + + L ++++ R L S Sbjct: 296 AY---------------RMLVYSVVLVIIMVFRPQGLFGNWEFSL 325 >gi|307725631|ref|YP_003908844.1| ABC transporter-like protein [Burkholderia sp. CCGE1003] gi|307586156|gb|ADN59553.1| ABC transporter related protein [Burkholderia sp. CCGE1003] Length = 619 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 107/334 (32%), Gaps = 29/334 (8%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 ++ + L + +L + G Y+ ++ IQ + + A + ++ G G L+ Sbjct: 24 SRSRPLRGLATIGVLGVLLIAAGPFLFGSYLLNVLIQAFFFSIVAVTVDVLWGYTGYLTF 83 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + +GAY+ ++ + G S ++ A + L + Sbjct: 84 GQSAFFGLGAYAAGLVFTHGGFSAAYVLLALAATLAVTAGVAALLGWLSFYRGASPFFAT 143 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + + I++ ++ G+ +F + Y++ Sbjct: 144 VMSLVLPIVLSQLLLSGGE---------------WTGSSSGLTGYQTFDLSLEAWYWIAG 188 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + R+ IRDN+ L K+ ++A G+AG Sbjct: 189 AALAVVVGLAWIFVRSDGGRVLAAIRDNESRCLYLGINTSLVKIVLLVATAAVAGLAGFG 248 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + + ++P++ F +I V LGG +L ++ G+ + Sbjct: 249 YGSFSGVVAPELTGFVLGTQLIIWVALGGRGTLWGPVIGALLINVGTSYLSGIMPF---- 304 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ A VI++ L+ L Sbjct: 305 ----------AWQLILGAAFVAVIVLLPQGLVPL 328 >gi|91975257|ref|YP_567916.1| ABC transporter related [Rhodopseudomonas palustris BisB5] gi|91681713|gb|ABE38015.1| ABC transporter related [Rhodopseudomonas palustris BisB5] Length = 590 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 103/312 (33%), Gaps = 22/312 (7%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 Y ++ I I + A GL ++ G G+ S GAY+ +L YG Sbjct: 21 PFTGLMPDYWITLFNYIGISSLVAIGLVLLTGVGGMTSFGQAAFVGFGAYTTGVLTVYYG 80 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 +S WL +P + ++ +++G +++ G YL + T+ F + + G Sbjct: 81 VSPWLTLPAAIAVTMVAALLVGAITVRLSGHYLPLGTIAWGIAFFYLFGNMSWL-GAHDG 139 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + L +I + V+ L+ L + A Sbjct: 140 LPGIPALQ--------------IGGYALIQPRDYFVVVWIAVVLAVIATQNLLSGRVGRA 185 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R +R + +A + AKL F ++ G+AG +A + +SP F + Sbjct: 186 VRALRRSTRAAEAFGVNTAGAKLLVFVYAAMLAGLAGWLYAHFQRSVSPGPFGITAGTEY 245 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + + +LGG + A + + + F L Sbjct: 246 LLMAVLGGAGRVYGAILGAAGITFLRDQLQDWLPKLLGHTGNF-------EIIAFGAVLV 298 Query: 330 LVILMRSHSLLR 341 L++ L Sbjct: 299 LLLQTAPGGLWP 310 >gi|225628840|ref|ZP_03786874.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid transport ATP-binding protein LIVG [Brucella ceti str. Cudo] gi|260167153|ref|ZP_05753964.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella sp. F5/99] gi|261756555|ref|ZP_06000264.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99] gi|225616686|gb|EEH13734.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid transport ATP-binding protein LIVG [Brucella ceti str. Cudo] gi|261736539|gb|EEY24535.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99] Length = 605 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 132/325 (40%), Gaps = 30/325 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 22 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ VIL + + S I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 82 GYTGVILFNMG-----ISPWFSMFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 136 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 137 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 183 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 242 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + ++GG+ +++ +L+ + E L F Sbjct: 243 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 298 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 299 ------VYGLVLILVVLFMPNGIMG 317 >gi|332981086|ref|YP_004462527.1| amino acid/amide ABC transporter membrane protein 2 [Mahella australiensis 50-1 BON] gi|332698764|gb|AEE95705.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Mahella australiensis 50-1 BON] Length = 318 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 75/341 (21%), Positives = 137/341 (40%), Gaps = 41/341 (12%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + ++ L + +++ + I ++ A L+++ G G SL Sbjct: 5 RRNLIRNIVTLAAIYAIIQLLISFDIIDQHLQLNLFLLCINIILAVSLNLITGFTGQFSL 64 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 AIGAY ++ + L L I SA+ + G+++G+P+L+ RGDYLAIATL Sbjct: 65 GHAGFMAIGAYVSAVMTLKLHLPFPLAIATSAISAAIVGVLVGIPTLRLRGDYLAIATLG 124 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 +SEI + I + I G +G+ R + + Sbjct: 125 LSEIIRIIALNIDYI-GGASGLADIPR-------------------------YVNWPWIF 158 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 M + II ++ A IR++ A S+ I K+ AF + + F G+AG+ Sbjct: 159 AMTAGTIIIIYNFIHSSYGRACIAIREDDIAAESMGIDIAHYKILAFTIGAFFAGIAGSL 218 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 +A + P+ F F ++I ++ +V+ GG+ S++ A L + + + Sbjct: 219 YANYFYFLKPNAFGFMKSIDILVMVVFGGLGSITGSVVGAAALTLLSMVLQDL------- 271 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 L + L +++L R LL S L Sbjct: 272 --------PTLRMILYALLLLVIMLYRPQGLLGNAELSWKL 304 >gi|188587332|ref|YP_001918877.1| inner-membrane translocator [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352019|gb|ACB86289.1| inner-membrane translocator [Natranaerobius thermophilus JW/NM-WN-LF] Length = 360 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 70/330 (21%), Positives = 135/330 (40%), Gaps = 24/330 (7%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L +++ L+ + + + ++ I+IY + A G +I++G G +SL Sbjct: 5 KRPYLYITLGLLFILVPIVNIYLPIFSRGQMTILNMIVIYSIGAIGFNILLGYSGQVSLG 64 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + +GAY + LS L + V+ +I G+I+G +L+ G YLAIATL + Sbjct: 65 HIAFMGLGAYLSAYITQVMDLSFILGLLVAGIIPMLLGLILGAIALRLEGHYLAIATLGL 124 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 ++I I+W T G +G F ++ + Sbjct: 125 GMTIKHIFIEWTAFTEGFSGRRAPPAEIFGLEIIQREH---------------SLILGTI 169 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + A L + A +RD+ A ++ ++ K+ AFA+S+ ++G+AG + Sbjct: 170 VLVILAIFAYNLLNSKTGRALMAMRDSSHAAQAVGISMFKYKMIAFAISTFYVGIAGGLY 229 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A I P + ++ ++++ ++GG+ S+ A L V L + Sbjct: 230 AHLIRFIEPTRWGLEASLDLVAMTVIGGLASIGGSVVGAAFLEIVPNLARNLPVLEGIRS 289 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + F + I L L I+ L Sbjct: 290 INF---------IITGILLILTIIYFPEGL 310 >gi|292655348|ref|YP_003535245.1| putative branched-chain amino acids ABC transporter permease [Haloferax volcanii DS2] gi|291371373|gb|ADE03600.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] Length = 374 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 68/347 (19%), Positives = 132/347 (38%), Gaps = 22/347 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R +I +L ++ LL+ L +++ + +Y + + GL++ G GL Sbjct: 13 VRDATERRIFAVLGLITVLLVVGVLTGVVGLRFLLFQIALVGMYALLSLGLNVQWGYAGL 72 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 ++ + + IGAY +L + + ++S +++G+P+L+ R D Sbjct: 73 INFSVAAFWGIGAYCAALLTAPNSPLGLGLHPVFGFLGAIVVSALIAVLIGIPTLRLRED 132 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLAIA+L ++E+ + I++ T G GI L + Sbjct: 133 YLAIASLGLAEVIRTIILNEDQWTAGSRGISGIPNL---------------LSWLPLTDS 177 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 V++ + + + + R+ RTIR ++ +L K+ AF + S Sbjct: 178 ATTAAVVVVLIAVVYLFLRRVHRSQWGRVLRTIRSDEDLAKALGKNTYRFKMQAFVLGSV 237 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 + +AGAF+A I P + VILGG S A++I + E Sbjct: 238 IVAVAGAFYAHLNLYIDPSDLVPLTTFYIWIAVILGGTGSNRGAVVGAAVVIAIREGTRF 297 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 +N + + + L++ R LL + Sbjct: 298 LND--IGFIQTLGVDLAPLRLLFVGGLIILIMRFRQDGLLPPKDELI 342 >gi|221212528|ref|ZP_03585505.1| ABC transporter ATP-binding/permease protein [Burkholderia multivorans CGD1] gi|221167627|gb|EEE00097.1| ABC transporter ATP-binding/permease protein [Burkholderia multivorans CGD1] Length = 854 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 105/333 (31%), Gaps = 34/333 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L L A + QI IY ++ G++++V GL+ + + Sbjct: 11 VAVLTLSLVAVSLALTATGTPLERATQIAIYTLYGMGVNLLVAYTGLVPFGASVFFGTTT 70 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y + + L + S +++ ++G L+ RG Y ++ TL S+I I Sbjct: 71 YLVAVSLLHVLGNEVLALAASVLVTTVLAALIGAIVLRRRGLYFSLLTLACSQIAFEIAF 130 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 KW +T G+ G+ R F + A ++ Sbjct: 131 KWTDVTGGENGLQNVPRPTFP-------------------TAAAFHVFACVTVIAVAWLL 171 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + A + +RDN++ SL KL AF +S+A IG AG Sbjct: 172 WRIVHAPFGRALQALRDNEQRAASLGYDTYRLKLRAFVISAAVIGYAGGLLCLMLQGAYA 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + + + +LGG+ I + + + +++ Sbjct: 232 NNLSWEHAGDSLLMTVLGGVHQFLGPLWGAIAFILLEDKLSSLTEHWW------------ 279 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + + R Sbjct: 280 ---LIFAPIVIAFAFFSPEGIHGIVQRVLRRSR 309 >gi|86137780|ref|ZP_01056356.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] gi|85825372|gb|EAQ45571.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] Length = 661 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 103/311 (33%), Gaps = 26/311 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ + +SI + + Sbjct: 372 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQVIPNHTVSILVAV 431 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ ++ A G+ M +++ + L+ + L + G + Sbjct: 432 PLAFAVTFAAGVAMERLVIRWLYNRPLET-LLATFGISIALQQLAKNIFGTQARPLTAP- 489 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V + + + +RRT + R + N Sbjct: 490 --------GWLDGAWIINDVVSISYIRIAIFMLALIFLGVFLFIMRRTRLGLETRAVTQN 541 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + S+ + F + S G+AG S + V++G Sbjct: 542 RAMAGSMGINPERVNMLTFGLGSGIAGIAGVAIGLFAKVTSELGSDYIVQS--FMTVVVG 599 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ ++ + +N S + T M++ + + I R Sbjct: 600 GVGNIWGTLAGATMIGFFQKGVEWLNP-----------SNTLAAQTYMILFIIVFIQFRP 648 Query: 337 HSLLRLRTPSN 347 ++ L+ + Sbjct: 649 RGIIALKGRAA 659 >gi|170740545|ref|YP_001769200.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168194819|gb|ACA16766.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 357 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 133/325 (40%), Gaps = 19/325 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V + L +Y S+ IQI + + A GL+I+VG G +S+ + GA+ Sbjct: 31 AVLAGIALLACAPLVLDRYWLSLLIQIGYFAVAALGLNILVGFTGQISIGHAAFFGFGAF 90 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L + + + ++ IP++ +++ A G++ GLP+ + +G YLAIATL I Q+ + Sbjct: 91 ASAWLSNTFSVPVFFAIPLAGVLTTAVGLVFGLPAARLKGLYLAIATLAAQYILQDFFAR 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G AG +YV+L L+ + Sbjct: 151 ANWFTGGVAGTPAEAFSILGFAFDTDQRY---------------FYVVLAYLVLTFVLAT 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ A +RD+ + + + + +F +S+ F G+ G +A +S + Sbjct: 196 NLMRSRDGRALVAVRDHYLSAEMMGINLTRYRTLSFGLSAFFAGVGGGLYAHYLQFVSVE 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS----LLKFDCS 315 F +I + ++I+GG+ S+ TA ++ V E + S L + Sbjct: 256 GFGILLSIQFLGMIIIGGLGSIMGTLMGTAFMVLVPEAMGWLTDAVKGSAVDRALALKDN 315 Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340 + + + + L ++ L Sbjct: 316 LSFLREMAIGLVIVLFLIFEPDGLA 340 >gi|296534601|ref|ZP_06897013.1| branched-chain amino acid transport system protein [Roseomonas cervicalis ATCC 49957] gi|296265088|gb|EFH11301.1| branched-chain amino acid transport system protein [Roseomonas cervicalis ATCC 49957] Length = 588 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 106/309 (34%), Gaps = 28/309 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y + + I+ M +I+ G GL+S + GAY+ IL YG++ Sbjct: 25 TFLISGYELLVISMVGIWAMLGLSWNILGGYGGLVSFGHAAFFGGGAYTVAILFHDYGVT 84 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 W+ + A I +++G + + +G Y ++A L + Sbjct: 85 PWIGCLLGAGIGALLAVLIGAITFRLKGHYFSLAMLAYPLALIPVFTWAGWHELALPLQR 144 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 Y + M ++LG ++ I L + RT + Sbjct: 145 QDPLHYMQFSD-----------------PRVMPLIILGALGIALFICLRIERTRLGLQLF 187 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVI 270 IR N+ A + KL A A+S G+AGA +A ++P F + + Sbjct: 188 AIRQNELAAQCAGIATLRTKLVASAISGGIAGLAGALYATVVLVVTPHSVFGMLVSAQGL 247 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + + GG+ + IL+ + E+ + + IA+ Sbjct: 248 IVSMFGGLGAAWGPVIGAIILVPLAEMLNATIGARLPGMQG----------VVFGIAIMA 297 Query: 331 VILMRSHSL 339 VIL R + Sbjct: 298 VILFRPQGI 306 >gi|328543776|ref|YP_004303885.1| amino acid or sugar ABC transporter, permease [polymorphum gilvum SL003B-26A1] gi|326413520|gb|ADZ70583.1| Putative amino acid or sugar ABC transport system, permease protein [Polymorphum gilvum SL003B-26A1] Length = 319 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 133/324 (41%), Gaps = 24/324 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ ++L + +G + I + GL +++G G +SL IG Sbjct: 9 ITLLALVVLIAVAPLFFPSAFYYRVGTLMFINGLAVTGLVVLIGYAGQISLGHAGFSGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ + GL + A++SG ++G P L+ +G YLA+ATL + +L Sbjct: 69 AYACALGPLHLGLPPAASLVFGAVLSGGIAWLVGRPILRLKGHYLAVATLGFGILVSMVL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +T G G+ L R V Y+ + A + Sbjct: 129 TNEAHLTGGPDGM---------AVEDLGLRAALREIGISVRAPELWYWFSGLVLLAGAWL 179 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L L+ + A R++ D++ A ++ + KL+AF +S+ + +AG+ A +S Sbjct: 180 VLNLQDSPTGRALRSLHDSEIAARTVGVDVARYKLTAFVISAVYASVAGSLLAMMNRFVS 239 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD+ F +I ++++ +LGG ++ +IL + ++ + Y Sbjct: 240 PDIAGFLHSIQMVTMTVLGGAGTVLGAVTGASILTALPQVLTVFHDY------------- 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 ++ + + LV++ L+ Sbjct: 287 --EHIVLGLIMMLVMIFLREGLVP 308 >gi|239945414|ref|ZP_04697351.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239991876|ref|ZP_04712540.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] Length = 406 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 16/324 (4%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY---------- 81 ++ G+ + + A GL+++ G+ G LS+ A+GAY Y Sbjct: 50 PFYLDRFWLQAGLFAMAAAIGAIGLNMLTGATGQLSMGHAFFLAVGAYGYCVLAGESGTE 109 Query: 82 -VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 + GL WL ++ +++GA G I + + RG YL IATL + I Q++L Sbjct: 110 NGHTLTGLGLPTWLAAILAVLLAGAAGGIFSPIAGRLRGAYLGIATLALIFIGQHVLFNA 169 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G G V F T S + P + + L + L A +L Sbjct: 170 GSLTGGYNGRAVPPLSVFGFTFDDSELIVAAVPFGSSEKLWYAGLLALLLSALFARGVLR 229 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 R A IRD++ A + + + F +SS + G+AG A R P+ Sbjct: 230 GR---PGRAMNAIRDHRIAAGVMGVPVARYRAGVFVLSSMYAGLAGVLLALVFQRTVPEY 286 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNM 318 F ++ ++++++GG+ S++ A + + ++ + ++ + Sbjct: 287 FGMILSLEYLAMIVIGGLGSVAGAVIGAAFVSLLPQVFTHYSDSLPLVSAPGTGGLAPGE 346 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 L A+ V+L L RL Sbjct: 347 ASRYLYGAAVVAVVLFLPGGLARL 370 >gi|323530296|ref|YP_004232448.1| inner-membrane translocator [Burkholderia sp. CCGE1001] gi|323387298|gb|ADX59388.1| inner-membrane translocator [Burkholderia sp. CCGE1001] Length = 619 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 105/327 (32%), Gaps = 29/327 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L A+ +L + G Y+ ++ IQ + + A + I+ G G L+ + Sbjct: 31 GLAAIGMLGVLLIAAGPFVFGTYLLNVLIQAFFFSIVAVTVDILWGYTGYLTFGQSAFFG 90 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+ ++ + G S ++ A + L + + + Sbjct: 91 LGAYAAGLVFTHGGFSTAYVLLAFAATLAVTAGVAALLGWLSFYRGASPFFATVMSLVLP 150 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I++ ++ G+ +F + Y++ + Sbjct: 151 IVLSQLLLSGGE---------------WTGSSSGLTGYQTFDLSLEAWYWIAGAALAVVV 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + R+ IRDN+ L K+ ++A G+AG + + Sbjct: 196 GLAWIFVRSDGGRVLAAIRDNESRCLYLGINTSLVKIVLLVATAAVAGLAGFGYGSFSGV 255 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P++ F +I V LGG +L ++ G+ + Sbjct: 256 VAPELTGFVLGTQLIIWVALGGRGTLWGPVIGALLINVGTSYLSGIMPF----------- 304 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ A VI++ L+ L Sbjct: 305 ---AWQLILGAAFVAVIVLLPQGLVPL 328 >gi|254427270|ref|ZP_05040977.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] gi|196193439|gb|EDX88398.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] Length = 365 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 138/320 (43%), Gaps = 13/320 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L L Y +L++ + GL ++ G G +SL AIGA++ Sbjct: 26 AILAALLLAAPWVLGNYYLGELTAVLVWSLAGLGLMLISGHTGQVSLGHAAFMAIGAFTN 85 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + + G + SA+ SG G ++ P L+ G YL IATL +S I +++ I + Sbjct: 86 -LALMQRGWHFLPALLASAVTSGVAGAVIARPILRMSGIYLGIATLALSIIVEDVSIMAE 144 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 P+T G AG++ I F YY+ LG+ L L L Sbjct: 145 PVTGGVAGVFAPP------------ISLFGMEIDRYATPEAFYYLCLGVLVLVTLGYLNL 192 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+A ++ +RD++ + +L + AK AF++S A G+AGA +A ++ + F Sbjct: 193 LRSASGRSFLAVRDSEVSARALGVNVARAKTLAFSLSCAITGLAGALYAHLAQAVNYESF 252 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 +I ++ V++GG+ S+ +++ + ++ + Y N+ ++ T Sbjct: 253 LVLISITLLLQVVIGGLGSVHGAFFGAIVVVLLPQVIAIASDYLDNTAGIQIAAYPGLDT 312 Query: 322 TLMVIALFLVILMRSHSLLR 341 L + + L+++ L Sbjct: 313 ALFALLILLMVIYEPRGLYG 332 >gi|291279875|ref|YP_003496710.1| branched-chain amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754577|dbj|BAI80954.1| branched-chain amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 350 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 75/321 (23%), Positives = 138/321 (42%), Gaps = 15/321 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++Y ++ LFL S Y+ + I I V+ A GL+I+ G+ GL+SL +GA Sbjct: 27 IMIYGFIIILFLLPVISNDYVLYLFNLIFISVIGAVGLNILTGATGLISLGHGAFIGVGA 86 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ + + ++ I +++ G I G+PSL+ +G YL+IATL I + + Sbjct: 87 YAAGYIFNTLHINFLFAILFGGIMAALVGSIFGIPSLRLKGLYLSIATLAAQFIIEFFFV 146 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + IT G G+ + + + + YY+ L C + Sbjct: 147 RLESITGGVTGLS---------------VDYASIFGIEIDNDFKFYYLGLVFCIVMTLFA 191 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + RT I A+ +IRDN A + I K+ +FA+SS + G+AG + I+P Sbjct: 192 ANIMRTKIGRAFLSIRDNYIAAEVMGVNIFQYKILSFAISSFYAGVAGGLWTFYTTIITP 251 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I +S++I+GG+ + + + E ++ Y F Sbjct: 252 EHFTIGVSIQYLSMIIIGGLGKVLGSIFGAVFMTILPESIKFVSDYLSQYYPNITQLFAS 311 Query: 319 RHTTLMVIALFLVILMRSHSL 339 + + + L ++ L Sbjct: 312 IREGVFGLVIILFLMFEPEGL 332 >gi|194292490|ref|YP_002008397.1| high-affinity branched-chain amino acid transport, inner-membrane translocator, livhm family [Cupriavidus taiwanensis LMG 19424] gi|193226394|emb|CAQ72343.1| high-affinity branched-chain amino acid transport, Inner-membrane translocator, livHM family [Cupriavidus taiwanensis LMG 19424] Length = 348 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 126/320 (39%), Gaps = 28/320 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L L + Y ++ IY + GL+++ G G L+L AIGAY+ Sbjct: 12 LLLALAIAFPLVTPNSYYLTVMTLAFIYAIATLGLNLITGYTGQLNLAHGGFMAIGAYTL 71 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 IL + + WL ++ ++ G ++G+ SL+ +G Y +I T+ + I ++ KW+ Sbjct: 72 GILTVDHQVPFWLAFVLAGVLCMVLGYVVGVVSLRLKGHYFSIFTMCVGYIIYLLIEKWE 131 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T+G G+ YY++L L ++ + Sbjct: 132 SLTHGTVGLIGIPVPA-------------AIGPLSFDSVQAQYYLVLAFLALGVFLMHRI 178 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + ++ +R++ +L ++ K+ +F +S + G AGA +A + PD+ Sbjct: 179 VTSLLGRSFMAVRNSDALAEALGINLMRTKVLSFVLSVGYAGFAGALYAGQVRFLGPDIA 238 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + ++ +++GG+ +L ++ + + M Y Sbjct: 239 RTDLTFDMVMSMLVGGIGTLFGPLLGAVLVPWITQSLQFMQDY---------------RM 283 Query: 322 TLMVIALFLVILMRSHSLLR 341 + L L+I+ ++ Sbjct: 284 LVFGPVLILLIIFVPDGIVG 303 >gi|156743438|ref|YP_001433567.1| ABC transporter-like protein [Roseiflexus castenholzii DSM 13941] gi|156234766|gb|ABU59549.1| ABC transporter related [Roseiflexus castenholzii DSM 13941] Length = 616 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 133/328 (40%), Gaps = 28/328 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + ++A+ L+F + + + + I + ++ A L++ +G GL S+ Y Sbjct: 9 IWIIALCGSALIFPLIFPSTERNFWTYYSATIGVTILLASALNLSLGYTGLFSMAHSALY 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ AY+ +L +R G WL +PV+ ++ G +M + +L+ Y A+ TL + + Q Sbjct: 69 AVAAYTSAVLVTRAGWPFWLSLPVAVCLTALVGALMAVTTLRASNLYFAVITLAFALLIQ 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + W PIT G G++ R F + ++ + M ++ Sbjct: 129 ELARVWTPITGGLFGLHSVPRPSFGDQPMS---------------LATYFFFIWFMVGIA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + + A+R ++ ++A +L + KL AF++S+A G+AG F Sbjct: 174 LWGLANIVDSRYGRAFRALKLREEAAAALGVAPLRYKLIAFSLSAALAGVAGVLFVHLAG 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P++ +++ V +GG+ +L+ G+ + Sbjct: 234 FVAPEIAGLDAGLLLFVSVFIGGVGTLTGPVIGVLFASGLQQAIGNTLDA---------- 283 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L +L+ L+ Sbjct: 284 ---AYQQLIFGAVMLLTMLVLPAGLIGT 308 >gi|300313300|ref|YP_003777392.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076085|gb|ADJ65484.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 597 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 114/312 (36%), Gaps = 22/312 (7%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + ++ I +Y + A GL ++ G G+ S +GAY+ L + +G Sbjct: 19 FPLLPTPQFWVIQANYIGLYALVAIGLVLLTGIGGMTSFGQAAFVGMGAYTTSYLTTVHG 78 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 +S WL +PV I+G ++G +L+ G YL +AT+ + K + G Sbjct: 79 VSPWLTLPVGLFITGVSAYVLGRITLRMSGHYLPLATIAWGISLYFLFGKVDFL-GKYDG 137 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 I L G + +YY++ + +A + L L + A Sbjct: 138 ISGIPALQLAGLDLAKERH--------------LYYLIWAIVLAAAWVSLNLLDSRAGRA 183 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++ + ++ K+ F ++ ++G FA + ++P F + I Sbjct: 184 IRALKGGRSMAEAMGVDTGRYKILIFVFAALLASVSGWLFAHMQRTVNPSPFSLAMGIEY 243 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + IV++GG+ + +L + + + + + + L Sbjct: 244 LFIVVVGGIAHIWGALLGAGVLKLLSDQLQVLLPALLGDG-------GSYESIVFGLILI 296 Query: 330 LVILMRSHSLLR 341 L++ L Sbjct: 297 LLLKYAGGGLWP 308 >gi|212702299|ref|ZP_03310427.1| hypothetical protein DESPIG_00310 [Desulfovibrio piger ATCC 29098] gi|212674292|gb|EEB34775.1| hypothetical protein DESPIG_00310 [Desulfovibrio piger ATCC 29098] Length = 342 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 82/328 (25%), Positives = 147/328 (44%), Gaps = 31/328 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L L + + Y + + I +Y + A L++++G G+ + +A+GA Sbjct: 5 IVIVGLAAALLVLPLFTNPYWTDVCVSIGLYALLALSLNVILGQAGIFHMGHAAFFAVGA 64 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 YS IL + Y I+L +PV+ + +++ P + RGDYL I T+ + EI + LI Sbjct: 65 YSTAILNTMYYWPIFLTMPVAGCAAALFALVVARPIIHLRGDYLLIVTIGIVEIVRIALI 124 Query: 139 K-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +T G GI+ R F G + + F YY++ GM +S + Sbjct: 125 NDVGGLTGGSNGIFGISRPVFFGFRIFKPLHF--------------YYLVWGMVGVSLLL 170 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R+ I A I+++ A + KL AF + + + GMAG +AA I+ Sbjct: 171 FYGLWRSRIGRALNCIKEDDVAAEGCGINVTHYKLMAFVLGAFWAGMAGTLYAAKMTTIA 230 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E++I+ ++VIL G S + + + IG+ EL + Sbjct: 231 PESFNFMESVIIFAVVILSG-GSQLGVLVSAFLFIGLPELLREFSG-------------- 275 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345 + +A+ L+++ R L+ ++ Sbjct: 276 -ARMLIFGLAMMLMMIWRPQGLMPPKSR 302 >gi|332798397|ref|YP_004459896.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp. Re1] gi|332696132|gb|AEE90589.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter sp. Re1] Length = 287 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 129/305 (42%), Gaps = 37/305 (12%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I+I + A L+++ G G LSL IGAY+ + + L + I Sbjct: 2 NYYLQILTVIMINSILAVSLNLITGYTGQLSLGHATFMGIGAYAATLFTLKLHLPFLISI 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + A ++ G I+G+P+L+ +GDYLAIATL EI +NIL+ IT G G+ Sbjct: 62 VLGASVAAFFGFIIGVPTLRLKGDYLAIATLGFGEIMKNILLNL-KITGGPMGLRGIP-- 118 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++ Y+ FL + + + + ++ IR++ Sbjct: 119 -----------------------KVTNIYIAAVALFLVIFSLNRIMNSRVGKSFIAIRED 155 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A ++ K+ AF + + + G+AG +A I+P F F ++I ++ +V+LG Sbjct: 156 ELAAEAMGINTTQFKILAFIIGAFYAGLAGGLYAFLFRYINPKDFGFMKSIEILCMVVLG 215 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM + I+ + EL ++ + L ++++++ Sbjct: 216 GMGNTYGAVLGACIITVLPELLRSISP-----------VIAQYRMVFYGLLLIIMMIVKP 264 Query: 337 HSLLR 341 ++ Sbjct: 265 EGIIS 269 >gi|221196889|ref|ZP_03569936.1| ABC transporter ATP-binding/permease protein [Burkholderia multivorans CGD2M] gi|221203559|ref|ZP_03576578.1| ABC transporter ATP-binding/permease protein [Burkholderia multivorans CGD2] gi|221177493|gb|EEE09921.1| ABC transporter ATP-binding/permease protein [Burkholderia multivorans CGD2] gi|221183443|gb|EEE15843.1| ABC transporter ATP-binding/permease protein [Burkholderia multivorans CGD2M] Length = 854 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 105/333 (31%), Gaps = 34/333 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L L A + QI IY ++ G++++V GL+ + + Sbjct: 11 IAVLTLSLVAVSLALTATGTPLERATQIAIYTLYGMGVNLLVAYTGLVPFGASVFFGTTT 70 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y + + L + S +++ ++G L+ RG Y ++ TL S+I I Sbjct: 71 YLVAVSLLHVLGNEVLALAASVIVTTVLAALIGAIVLRRRGLYFSLLTLACSQIAFEIAF 130 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 KW +T G+ G+ R F + A ++ Sbjct: 131 KWTDVTGGENGLQNVPRPTFP-------------------TAAAFHVFACVTVIAVAWLL 171 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + A + +RDN++ SL KL AF +S+A IG AG Sbjct: 172 WRIVHAPFGRALQALRDNEQRAASLGYDTYRLKLRAFVISAAVIGYAGGLLCLMLQGAYA 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + + + +LGG+ I + + + +++ Sbjct: 232 NNLSWEHAGDSLLMTVLGGVHQFLGPLWGAIAFILLEDKLSSLTEHWW------------ 279 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + + R Sbjct: 280 ---LIFAPIVIAFAFFSPEGIHGIVQRVLRRSR 309 >gi|322369207|ref|ZP_08043772.1| ABC-type branched-chain amino acid transport system, permease protein II [Haladaptatus paucihalophilus DX253] gi|320550939|gb|EFW92588.1| ABC-type branched-chain amino acid transport system, permease protein II [Haladaptatus paucihalophilus DX253] Length = 377 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 133/343 (38%), Gaps = 14/343 (4%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 + F + L V+P L + + S+ ILI+ +FA G ++++ Sbjct: 25 LDRFGSSERSIVGLTVLAVAVFPWLFVRAPVISGLFRGYQSLASLILIWGIFALGFNLLL 84 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G GLLS + AY+ I + S L++ + + I+G SL+ G Sbjct: 85 GYTGLLSFGHAAFWGGAAYAAGIFSASVSGSPVLMVLFGTLFAVLLAWILGFVSLRRGGI 144 Query: 121 YLAIATLIMSEIFQNILIK-WKPITNGKAGIYVAD-RLYFLGTTVRSLIRFFRFPSSFVI 178 Y +I TL ++ + + + +TNG+ G D F S + + Sbjct: 145 YFSILTLAFGQMAYYLALSPLQGLTNGENGFTDVDVGNLFGFLDAFSAFESIPLGTPVPL 204 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 ++Y + + L + ++ + + ++ IR+N++ + + KL AF +S Sbjct: 205 LGDWLYVFVGAITVLCVAAVVRILHSPYGLVFKAIRENEQRASFVGLNVWRYKLMAFILS 264 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 AF G+AG+ F + + ++ + ++ + +LGG+ S+ + + V + Sbjct: 265 GAFAGVAGSLFVVHGSYVPVESLYWTTSGEIVVMTVLGGVGSMVGPMLGAGLYLYVENVV 324 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 G D + ++ + VI + + Sbjct: 325 SG------------DPAIQPYWHLILGLIFVAVIALFPEGIWG 355 >gi|293400321|ref|ZP_06644467.1| hydrophobic amino acid uptake (HAAT) family ABC transporter, permease protein LivM [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306721|gb|EFE47964.1| hydrophobic amino acid uptake (HAAT) family ABC transporter, permease protein LivM [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 318 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 77/350 (22%), Positives = 145/350 (41%), Gaps = 43/350 (12%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 + K + I ++ V + + + I I I ++ A GL++++G Sbjct: 1 MKSQFTKRNLIWTIVVCVIFSIFQIAISGRMIPNTYQVAIITIGINIILALGLNLIIGFT 60 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G SL +IGAYS I+ ++ +++ + V I+ +I+ +P+L+ RGDY Sbjct: 61 GQFSLGHAGFMSIGAYSAAIVLAKMPNLTGLFVGMLVGMAITAVVALIVAIPTLRLRGDY 120 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAIATL SE+ + + + IT G AG+ +L Sbjct: 121 LAIATLGFSEVIRIAIQNME-ITGGAAGLSNIPKLTTFP--------------------- 158 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 ++ +S +I R++ A ++R+++ A S+ K AF + + Sbjct: 159 ----LVFVFIVISVIVIHNFIRSSHGRACISVREDEIASESMGINTTKYKTLAFVIGAML 214 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 +AGA +AA + P F F ++I ++ IV+ GGM SLS A +L + Sbjct: 215 ASIAGALYAAYFYVLKPTTFGFMKSIDILVIVVFGGMGSLSGSILAAIVLGIINLTLQSY 274 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + L +A+ ++++ R L + ++FL + Sbjct: 275 SE---------------IRMILYALAIIVIMVYRPQGLFGSKEVTDFLPK 309 >gi|15805313|ref|NP_294005.1| branched-chain amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6457954|gb|AAF09864.1|AE001889_10 branched-chain amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 334 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 66/336 (19%), Positives = 128/336 (38%), Gaps = 24/336 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + LL + + + I ++I+ + +GL++++G G L L + Sbjct: 10 AAWLWIPAFLLAAAVPFLHPSGFTMELLINVMIWSIVTYGLNVLLGYTGQLPLAHAGFFG 69 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ IL ++G S W P++ ++ G+++GL + + +GD +I TL + I Q Sbjct: 70 IGAYTVGILTLKHGWSFWAAWPLAVVLCALGGLLLGLVAFRTKGDAFSIFTLGVGVIIQQ 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ KW +T G G+ L T + Y + L L+ Sbjct: 130 VINKWDALTGGNDGLNGIAPPAGLDTF---------AHGLGLKLNGGFYLLALLALALTV 180 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + R + + IR + S + KL A +S+A G AG +A Sbjct: 181 LVAARARHSVFGRSLLAIRGGEDLARSAGIDVFGHKLRAMMLSTAIAGFAGGLYAVYVGF 240 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + + + +++GG+ +L TA++ G+ +L + Y Sbjct: 241 LGSAVTGPVTTFTTLLYLLVGGVGTLLGPLLGTALMYGLTQLLKDLQDY----------- 289 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + L L+++ L+ L R Sbjct: 290 ----QYIVFGPLLVLLVMFMPQGLVGLWEKVRARRR 321 >gi|225028598|ref|ZP_03717790.1| hypothetical protein EUBHAL_02877 [Eubacterium hallii DSM 3353] gi|224954080|gb|EEG35289.1| hypothetical protein EUBHAL_02877 [Eubacterium hallii DSM 3353] Length = 361 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 135/337 (40%), Gaps = 24/337 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + K I + + +++ + + + + + + IY + A GL++ VG LG L Sbjct: 11 KQTKSMLITYAMVIAVFIIVEIMISTGMMSSLMQGLLVPLCIYSIVAIGLNLCVGYLGEL 70 Query: 67 SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL +GA+S + L + + +++ G ++G+P L+ RG Sbjct: 71 SLGHAGFMCVGAFSSAVFSKCMMTSGMNETLRFILALLIGTVVAAVFGWLIGIPVLRLRG 130 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +N++ + K + L + Sbjct: 131 DYLAIVTLAFGEIIKNVINVMYLGRDSKGFHFSIKDSASLNMQADGKMIIDGAKGIVGTP 190 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + V + + +S + L + A IRDN+ A S+ I KL AF +S+ Sbjct: 191 NQSTFVVGIIIILISLFVSFNLVNSRTGRAIMAIRDNRIAAESVGINITKYKLMAFTISA 250 Query: 240 AFIGMAGAFFAASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 A G G +A + ++ P F ++ +I+++ V+LGGM S A +L + E+ Sbjct: 251 AIAGAGGVLYAHNLSTLTALPANFGYNMSIMILVFVVLGGMGSFRGSIIAAVVLTMLPEV 310 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 G+ Y + I L +++L Sbjct: 311 LRGLADY---------------RMLIYAIVLIIMMLF 332 >gi|317401970|gb|EFV82572.1| high-affinity branched-chain amino acid transport ATP-binding protein LivG [Achromobacter xylosoxidans C54] Length = 612 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 120/325 (36%), Gaps = 22/325 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L V+ ++L + ++ + I + + GL ++ G GL S + Sbjct: 4 ILLAVFIVVLAGLPLLPVTPEFWVTQLNYIGLASLVVLGLVLLTGVGGLTSFGQAAFVGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ L ++Y +S WL +P +++ ++G +L+ G YL + T+ + Sbjct: 64 GAYTTAYLTTQYDVSPWLALPAGLILTAVVAYLLGAITLRLSGHYLPLGTIAWGLSLYFL 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + GI + + G ++ S +YY++ L+ Sbjct: 124 FGNLDWL-GKHDGIAGIEPISIFGMSLASGRH--------------IYYLIWVFVLLALW 168 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L + A R ++ S+ K+ F ++ ++G +A + + Sbjct: 169 ATRNLLNSRPGRAIRALKSGAGMAESMGVNTAAYKVVIFVWAALLACVSGWLYAHMQRAV 228 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F + I + + ++GG + +++++ + + + ++ F Sbjct: 229 SPSPFGINYGIEYLFMAVVGGAGYVWGALLGSSVILVLKDQLQNLLPKLLDTNANF---- 284 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L L++ + L Sbjct: 285 ---EMIVFGVLLILMLQYARNGLWP 306 >gi|159038915|ref|YP_001538168.1| inner-membrane translocator [Salinispora arenicola CNS-205] gi|157917750|gb|ABV99177.1| inner-membrane translocator [Salinispora arenicola CNS-205] Length = 390 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 80/376 (21%), Positives = 147/376 (39%), Gaps = 56/376 (14%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATK---------------SQKYIDSMGIQILIYVM 51 R ++ +L +A +Y L + T + +YV+ Sbjct: 28 RWQRWLTVLAGIAFLYYLPFLGDIPGTNLIIPGIDWFRTDSIDGGSNWAGVLFVCALYVL 87 Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWL 94 A GL++V+G GLL L V YA+GAYS + + ++ + Sbjct: 88 VAIGLNVVIGLAGLLDLGYVGFYAVGAYSVALFGSAQSPVVQALQRQFGLSQDWAIAWAI 147 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 IP++ S G+++G P+L+ RGDYLAI TL EI + + + Sbjct: 148 CIPIALAFSLVAGVLLGWPTLRLRGDYLAIVTLGFGEIIRIVAKNSAW---------AGE 198 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 G ++ Y++ + + L ++ L + + +W IR Sbjct: 199 AQGVPGIPGPEGPPSADNTVFGLLDIKPWYWLAVTVVLLMVMLVRRLEHSRVGRSWLAIR 258 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 +++ A + KL AFA+ +A G +G FA+ I P+ F +I+ +++V+ Sbjct: 259 EDEDAAAVMGVYPFKFKLWAFAIGAALGGFSGLLFASRSAFIQPETFNVQLSILFVAMVV 318 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG +++ +A +L + E Y +AL L++L+ Sbjct: 319 VGGSGNMAGVALGAFLLAYLPERFRDFAEY---------------RVLAFGLALVLIMLL 363 Query: 335 RSHSLLRLRTPSNFLE 350 R LL R + L+ Sbjct: 364 RPQGLLPSRRRTRELQ 379 >gi|89902265|ref|YP_524736.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89347002|gb|ABD71205.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 358 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 83/325 (25%), Positives = 147/325 (45%), Gaps = 20/325 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L L+L L L Q+Y + +LIY + GL ++ G GL SL +G Sbjct: 22 LFWYGALMLVLLLAPWLVQEYWLAQLTFVLIYAVAGLGLMLLAGFTGLFSLGHAAFLGVG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L + L + +A +S A G+++GLP+L+ +G YL IATL I + +L Sbjct: 82 AYTQAVLTNMGLP-FPLALACAAGLSAAVGLVVGLPALRVKGIYLGIATLSFGFIVEEVL 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W+ +T G +GI++ F T Y++ L + L+ Sbjct: 141 ARWESVTGGNSGIHIKKPDMFGWTLDSGEA---------------FYFLCLLITVLATLG 185 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 IL L R+ A+ IRD++ + S+ + + K +FA+S+A G+AGA +A IS Sbjct: 186 ILNLLRSPTGRAFVAIRDSEISAQSMGIHLAYYKTLSFALSAALAGIAGALYAHQLQFIS 245 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD F ++I ++ ++++GG+ S+ LI + + + Y ++ + Sbjct: 246 PDQFNILQSIDLLLMIVIGGVGSVHGAFLGAIFLITMPQAIAMVKDYLPPTIGQ----AP 301 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + + L +L L Sbjct: 302 GLQGLVYGVVLVAFVLFEPLGLYGR 326 >gi|295104030|emb|CBL01574.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Faecalibacterium prausnitzii SL3/3] Length = 342 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 137/340 (40%), Gaps = 39/340 (11%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ L+ V + ++ Y + + + + I ++ A L++ G LG L L Sbjct: 13 RYLMNLVLVGLLFVGLSYVTGNMLSTYQNKVLLTVGINIILAVSLNVATGYLGQLPLGHA 72 Query: 72 IAYAIGAYSYVILGSRYGLS----IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 A+GAY+ + L + + ++ +I+G G+++G+P+L+ GDYLAI TL Sbjct: 73 GFMAVGAYACALFTKSSNLPKGVAFAIGLVLAWVIAGLFGVLIGIPALRLTGDYLAILTL 132 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + L + F+ I + + + Sbjct: 133 GFGEIIRITLNNIDDVLG--------------------FKLFYGSKGLKNIPKYSNFTNV 172 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ +I + ++ A IRDN+ A S + K+ AFA S+AF G+AG Sbjct: 173 FLCVVITCFLIHAMMKSRHGRAVLAIRDNEIAAESCGIQTTYYKVMAFAFSAAFAGLAGG 232 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A ++P F F ++I ++ +V+LGGM S+ + +L + E Y Sbjct: 233 LYACYIGVLNPSTFGFMKSIEILVMVVLGGMGSMLGSILSATVLTILPEATRSFESY--- 289 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L L+++ R LL S Sbjct: 290 ------------RMVVYSLVLVLMMIFRPGGLLGSYDFSL 317 >gi|226356408|ref|YP_002786148.1| branched-chain amino acid ABC transporter permease [Deinococcus deserti VCD115] gi|226318398|gb|ACO46394.1| putative Branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] Length = 357 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 127/298 (42%), Gaps = 15/298 (5%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 I+I+ + GL++ G GL+++ +GAY+ + +R L +L IP+ + Sbjct: 56 MIMIFAVAVLGLNVTTGYTGLINIGQAAFMGVGAYATALAATRLNLPFFLAIPLGGLAGA 115 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 G +GLPSL+ + YLA+ATL IF+ + + L G Sbjct: 116 LVGTFVGLPSLRLKYLYLAVATLAFQIIFEWTV-------------GHSPLLAQGGAISM 162 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 ++ F +F+ + +F YY++L + A + + RT + +RDN +A ++ Sbjct: 163 PTVQIFGIRDTFLNHNMFWYYIILPVLVAMALLWRNVLRTRHGRSMIAVRDNDRAAAAMG 222 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 AKL+AF + S + G+AG FA + + + + ++ ++++ I+GG+ SL Sbjct: 223 INPGTAKLTAFMIGSFYAGIAGGLFAYFQKAVVIEDYGLHTSVQLLAMAIVGGLGSLPGS 282 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCS--FNMRHTTLMVIALFLVILMRSHSLL 340 ++ + + + + +A+ L ++ L Sbjct: 283 FLGPIFIVALDRFMGSASSWLGEKDIFPQGIDVATAMRPLAFGLAIMLFLMFEPRGLA 340 >gi|145595663|ref|YP_001159960.1| inner-membrane translocator [Salinispora tropica CNB-440] gi|145305000|gb|ABP55582.1| inner-membrane translocator [Salinispora tropica CNB-440] Length = 390 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 81/376 (21%), Positives = 147/376 (39%), Gaps = 56/376 (14%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATK---------------SQKYIDSMGIQILIYVM 51 R ++ +L +A +Y L + T + + +YV+ Sbjct: 28 RWQRWLTLLAGIAFLYYLPFLGDIPGTNLIIPGLDWFRTDSIDAGANWAGVLFVCALYVL 87 Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWL 94 A GL++V+G GLL L V YA+GAYS + + + + Sbjct: 88 VAIGLNVVIGLAGLLDLGYVGFYAVGAYSVALFGSAESPVVRALQEQFGLSQDWAIGWAI 147 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 IP++ S G+++G P+L+ RGDYLAI TL EI + + + Sbjct: 148 CIPIALAFSLVAGVLLGWPTLRLRGDYLAIVTLGFGEIIRIVAKNSAW---------AGE 198 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 G ++ Y++ L + L ++ L + + +W IR Sbjct: 199 AQGVPGIPGPEGPPSADNRFFGLLDIKPWYWLALSVVLLMVLLVRRLEHSRVGRSWLAIR 258 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 +++ A + KL AFA+ +A G +G FA+ I P+ F +I+ +++V+ Sbjct: 259 EDEDAAAVMGVYPFKFKLWAFAIGAALGGFSGLLFASRSTFIQPETFNVQLSILFVAMVV 318 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG +++ +A +L + E Y +AL L++L+ Sbjct: 319 VGGSGNMAGVALGAFLLAYLPERFRDFAEY---------------RVLAFGLALVLIMLL 363 Query: 335 RSHSLLRLRTPSNFLE 350 R LL R + L+ Sbjct: 364 RPQGLLPSRRRTRELQ 379 >gi|320538312|ref|ZP_08038193.1| amino acid or sugar ABC transport system, permease protein [Treponema phagedenis F0421] gi|320144811|gb|EFW36546.1| amino acid or sugar ABC transport system, permease protein [Treponema phagedenis F0421] Length = 332 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 135/337 (40%), Gaps = 35/337 (10%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + +V ++ F+ Y + I + A ++I+ G G LSL Sbjct: 9 RSIGLSIAALLVLVVMPGFFIKNGIIDPYTAQILTLAAINAIAAISVNIICGLTGQLSLG 68 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 AIGAY + + + I +A+++ G ++G P L+ GDYLAI TL Sbjct: 69 QAGFMAIGAYFLIWFYETCVIPLPAAIVAAALVAAVAGFVIGFPVLQLTGDYLAIVTLGF 128 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 EI + + +K T G G R S + + ++ + Sbjct: 129 GEIIRVVFTNFKSFTGGPNG--------------------KRITSILTVMPEYAWFAIAS 168 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L ++ ++ A +R+++ A S ++ K+ +F ++ G+AGA + Sbjct: 169 VLALVIIVLYNGMKSPYGRAVLAVREDEIAANSCGISVFRYKMGSFIFAAFVAGLAGALY 228 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + PD+ F++++ + V+LGG+ +++ A +L + EL + + Sbjct: 229 APFLGFVKPDIASFNKSVDFLIFVVLGGIGNITGSIIAAFVLTYLQELLRFLQEF----- 283 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + L +V+L R LL + S Sbjct: 284 ----------RLLIYPMLLIIVMLFRPQGLLGSKELS 310 >gi|295102252|emb|CBK99797.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Faecalibacterium prausnitzii L2-6] Length = 343 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 39/316 (12%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---- 91 Y + + + + I ++ A L++ G LG L L A+GAY+ + L Sbjct: 37 STYQNKVLMTVGINIILAVSLNVATGYLGQLPLGHAGFMAVGAYTCALFTKYSPLPDGVS 96 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + A+++G G+++G+P+L+ GDYLAI TL EI + L + Sbjct: 97 FAIGLALGAVMAGLFGVLIGVPALRLTGDYLAILTLGFGEIIRITLNNIDDVLG------ 150 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 F+ I + + + ++ +I + ++ A Sbjct: 151 --------------YSLFYGSKGLKNIPKYSNFANVFLCVVITCFLIHAMMKSRHGRAVL 196 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IRDN+ A S + K+ AFA S+AF G+AG +A ++P F F ++I ++ Sbjct: 197 AIRDNEIAAESCGIQTTYYKVMAFAFSAAFAGLAGGLYACYIGVLNPSTFGFMKSIEILV 256 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V+LGGM S+ + +L + E + Y + + L L+ Sbjct: 257 MVVLGGMGSMLGSILSATVLTILPEATRSFDSY---------------RMVIYSLVLILM 301 Query: 332 ILMRSHSLLRLRTPSN 347 ++ R LL S Sbjct: 302 MIFRPGGLLGSYDFSM 317 >gi|295401398|ref|ZP_06811369.1| inner-membrane translocator [Geobacillus thermoglucosidasius C56-YS93] gi|294976613|gb|EFG52220.1| inner-membrane translocator [Geobacillus thermoglucosidasius C56-YS93] Length = 324 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 72/339 (21%), Positives = 137/339 (40%), Gaps = 42/339 (12%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 I LA+V+ +++ L + + + I I +M A L +++G G S+ Sbjct: 11 WISIALALVFFVVVQLLISGEMLNSFYINTLFFIAINIMLAVSLHLIIGITGQFSIGHAG 70 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 A+GAY+ I+ + + L + + + G+++G+P+L+ +GDYLAIATL EI Sbjct: 71 FLAVGAYASAIMTMKLQMPFSLALLAGGIAAAVAGLLIGIPTLRLKGDYLAIATLGFGEI 130 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + IL+ + + + + + Sbjct: 131 VRIILLNVDYVGGAS---------------------------GMTVTHLTTWPWVFACLL 163 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 ++ +I + A +IR+++ A S+ + K+ AF + + F G+AG +A Sbjct: 164 ITIIVIANFTNSTHGRACISIREDEIAADSMGINTTYYKVVAFVIGAFFAGIAGGLYAHH 223 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I P F F ++ ++ V+LGG+ S+S A +L V Sbjct: 224 FYIIQPTNFGFLKSFDILIFVVLGGLGSMSGAVIAAILLTIVSTFLQEY----------- 272 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L LV+L R LL R ++F ++ Sbjct: 273 ----PETRMIIYSLVLILVMLYRPKGLLGTRELASFFKQ 307 >gi|254460758|ref|ZP_05074174.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206677347|gb|EDZ41834.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 636 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 28/312 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ I + I Sbjct: 347 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIIPDHTVSIIVAI 406 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIA-TLIMSEIFQNILIKWKPITNGKAGIYVADR 155 P++ ++ A G+ M R Y TL+ + +L + G + Sbjct: 407 PLAFAVTFAAGVAMERLV--IRWLYSRPLETLLATFGISIVLQQLAKNIFGTQARPLTAP 464 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + V + + A + ++RT + R + Sbjct: 465 ---------GWLDGSWVINDVVSISYIRIAIFVLAFVFLAIFLFIMKRTRLGLETRAVTQ 515 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N + S+ + F + S G+AG S + V++ Sbjct: 516 NPRMAASMGINPGRVNMLTFGLGSGIAGVAGVAIGLFAKVTSELGSDYIVQS--FMTVVV 573 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ A++ + + N + F F + R Sbjct: 574 GGVGNIWGTLAGAAMIGFLQKGIEWFNPSNTLAAQTFMIVFIIIFIQF-----------R 622 Query: 336 SHSLLRLRTPSN 347 ++ L+ + Sbjct: 623 PRGIIALKGRAA 634 >gi|78355307|ref|YP_386756.1| branched-chain amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217712|gb|ABB37061.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 322 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 139/320 (43%), Gaps = 30/320 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y + + +Y + A L+I++G G+ + YA+GAY+ +L + + Sbjct: 19 PAFINPYWTDVLNTVGLYAVLALSLNIILGHAGMFHMGHAAFYAVGAYTTAVLNVTFHVP 78 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN-ILIKWKPITNGKAGI 150 + +P + +++ +++ P + RGDYL I T+ + EI + ++ +T G GI Sbjct: 79 VLWAMPAAGVLAALFALVVARPIIHLRGDYLLIVTIGIVEIVRIALVNNIFDMTGGANGI 138 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + R G +R + F +Y++ G C ++ + WL + A Sbjct: 139 FGIARPELFGFKIRKPVHF--------------FYLIWGFCAVTILLFHWLENSRFGRAL 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 IR+++ A KL AF + + + GMAG FAA ISP+ F F E++++ Sbjct: 185 NYIREDEVAAEGSGVNTAAYKLGAFVLGAFWAGMAGTLFAAKMTIISPESFSFWESVVMF 244 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +IVILGGM S+ + +++G+ E+ + + A+ Sbjct: 245 TIVILGGMGSIRGVLLGAFLIVGLPEVFREL---------------ASARMLVFGAAMVA 289 Query: 331 VILMRSHSLLRLRTPSNFLE 350 +++ R+ LL L Sbjct: 290 MMIFRTQGLLPPAPRHYDLR 309 >gi|317124778|ref|YP_004098890.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Intrasporangium calvum DSM 43043] gi|315588866|gb|ADU48163.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Intrasporangium calvum DSM 43043] Length = 581 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 23/343 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + + FLF S+ Q+LI+ A GL+IVVG GLL L + Sbjct: 232 VLMLGAVAVAFLFPFTQDGSDANMSIATQVLIFASTALGLNIVVGLAGLLDLGYIAFLGA 291 Query: 77 GAYSYVILGSR------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 GAY + + + +++ + A++S G+I+G P+L+ GDYLAI TL Sbjct: 292 GAYIGAMFSHSAFATIGWKPNFLVVVVIGALVSATLGLIIGSPTLRVSGDYLAIVTLAFG 351 Query: 131 EIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 EIF+ + G + L S + Y++LL Sbjct: 352 EIFRLAMGNLDGQDGPKLTNGPNGIPAIPDLEIGGFSFGETHEVLGITLGRFANYYFLLL 411 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + ++ L + I W IR+++KA ++ KL AFA + GMAG Sbjct: 412 LLAAFIITVFTRLNDSRIGRGWIAIREDEKAAEAMGVNTFGLKLFAFAGGAFLAGMAGTI 471 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A ++PD + F E+ +++ V+LGGM +++ + IL + E + Y Sbjct: 472 KAHHDVSVTPDQYIFLESAFLLAAVVLGGMGTVAGVLIGATILKLMPEKLRFVADYRLLI 531 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ R ++ + Sbjct: 532 FGLLLVL---------------MMRFRPEGIVASKRRQLEFHE 559 >gi|110667576|ref|YP_657387.1| ABC-type branched-chain amino acid transport system, permease protein II [Haloquadratum walsbyi DSM 16790] gi|109625323|emb|CAJ51745.1| ABC-type branched-chain amino acid transport system, permease protein II [Haloquadratum walsbyi DSM 16790] Length = 384 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 131/343 (38%), Gaps = 5/343 (1%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 + F R + + ++P + + ++ +LI+ +FA G +++ Sbjct: 27 LQQFREREATVIGLTAIGVALFPWIFARAPVISDLLLGYQNLAALMLIWAIFAIGFDLLL 86 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G GLLS + AY I+ R +++ + + ++G SL+ G Sbjct: 87 GYTGLLSFGHAAFWGGSAYVAGIVSLRVSSDPIVMVAAGTIFAVLFAWVLGYLSLRRGGI 146 Query: 121 YLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 Y +I TL +++ + P+T G+ G+ D G+ + + Sbjct: 147 YFSILTLAFAQMLYYMSAAPLAPLTGGENGLTGIDVSPLFGSFHLESELPM---LAGELL 203 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 +MY + + + I + + +R IR+N++ + + KL AF VS+ Sbjct: 204 GTWMYAFVGVITVAAVGISYRILNSPYGMVFRAIRENEQRAKFVGLNVWRYKLMAFIVSA 263 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 F G+AG+ F + ++E+ ++ +V+LGG SL + + + + Sbjct: 264 GFAGIAGSLFTIHGSYVPLQSLFWTESGEIVIMVVLGGTASLFGPILGAGLYLYIENIVS 323 Query: 300 GMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 G+ + + F L+ + +VI L Sbjct: 324 GIQQLQVPFTDIVLINDFGTYWHLLLGLIFVVVIWTAPRGLWG 366 >gi|86739059|ref|YP_479459.1| inner-membrane translocator [Frankia sp. CcI3] gi|86565921|gb|ABD09730.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Frankia sp. CcI3] Length = 470 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 84/331 (25%), Positives = 137/331 (41%), Gaps = 31/331 (9%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + S SM I IY + A GL++VVG GLL L + +AIGAY+ S+ Sbjct: 142 IIAPLVVSTAAQQSMVNDIGIYALLALGLNVVVGYAGLLDLGYIAFFAIGAYATAYFTSQ 201 Query: 88 YGLSI--------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + + P++ +++ G+++G P+L+ RGDYLAI TL EI I Sbjct: 202 TAMPWHAPFVLNPFFVFPIALVLAALAGVVLGAPTLRLRGDYLAIVTLGFGEIIHLIANN 261 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ITNG G + L I + I + YY+LL + Sbjct: 262 ADNITNGARGAFGVPHLS---------INLLGLGYEWGIDPLPYYYLLLAIIVGVMIAFG 312 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ I AW IR+++ A + + KL AFA+ ++ G AG FA+ + +P Sbjct: 313 RLERSRIGRAWAAIREDEIAAEATGVATLRMKLLAFAIGASVSGFAGVLFASKQFF-NPQ 371 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F + V+++VI GGM S + +L G+ D Sbjct: 372 SFSLQASFFVVAVVIFGGMGSRLGVVVGAVVLQGIAFYLR-------------DKVPPAD 418 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + ++++ R L+ R ++ Sbjct: 419 RYIYFGAVIVIMMIFRPQGLVPSRRRRREIQ 449 >gi|153011800|ref|YP_001373013.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188] gi|151563688|gb|ABS17184.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188] Length = 624 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 125/337 (37%), Gaps = 13/337 (3%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + ++ ++A V PL++ + + + LI + G+ I G+ G++S Sbjct: 5 RRGTVVGIVATVLPLVVAALVAKGFFPGAGERLVTLFLINAVAVIGIGIYSGNSGIISFG 64 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 V AIGAY+ +L + + + L + L++ Sbjct: 65 NVGFMAIGAYASGLLTINPIVQ----------KTALPHLPEWLMGWGMPFLPALLVALLV 114 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYF--LGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + G + V S + F I +V Sbjct: 115 VALAAIAIGIPVARLGGSSASICTLGFLVIVHVVLVASSDFTRGSQTFFGIPRAVNLWVA 174 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L L+ +I R +A R R++ A ++ + + A+ + + G AG Sbjct: 175 LPFAVLAVAIARIYRDSAAGMKLRASREDDIASTAVGVNVRLHRFLAWVLGAMLSGAAGV 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 FA SP F F+ ++++++ILGG++++S TA+++ +VEL + Sbjct: 235 LFAHFIGAFSPKDFYFNLTFMLLAMLILGGISTVSGAVVGTAVIMVIVELLRKLEGGVDL 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + F + + +A+ LV+ LL +R Sbjct: 295 GVFQLPTVFGLTDIGI-GLAILLVMYRLQDGLLGVRE 330 >gi|23098139|ref|NP_691605.1| branched-chain amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22776364|dbj|BAC12640.1| branched-chain amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 328 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 67/324 (20%), Positives = 136/324 (41%), Gaps = 28/324 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L++ + Y + I+++ +GL+I+ G G LSL +AIGA Sbjct: 10 IVIGLLMVAILFPLFTQNNYYIHVMTLSFIWMIAVYGLNILAGYTGYLSLAHAGFFAIGA 69 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L + + WL + ++ +I+ G +GL +L+ + + AI TL + + ++ Sbjct: 70 YALGLLTVKAEVGFWLALILAPIITTIIGFGIGLIALRTKEHFFAIYTLCVGYVIYLLID 129 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 KW +T G G+ I YY +L + S +I Sbjct: 130 KWDSLTEGVRGLMGIPLPSD-------------IGPISFESNIAQYYFILIVLLFSIFVI 176 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + + IR++++ SL + KL AF +S+ F G+AGA +A+ + P Sbjct: 177 YRIVNSIVGKKLIAIRNSEQLALSLGISTKKNKLLAFVLSTFFAGLAGALYASFIRFLGP 236 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 D+ + ++ +I+GG+ +LS T +++ + + + Y Sbjct: 237 DIGSTNITFDLLMYLIVGGIGTLSGPIIGTLLVVWLSQNLQFLQDY-------------- 282 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + L L+I+ ++ + Sbjct: 283 -RMLIFGPLLALLIIFSPRGIVGM 305 >gi|33597387|ref|NP_885030.1| putative ABC-transporter permease component [Bordetella parapertussis 12822] gi|33573814|emb|CAE38122.1| putative ABC-transporter permease component [Bordetella parapertussis] Length = 318 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 24/332 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L Y +G I + + G+ I+ G G +SL IG Y Sbjct: 10 LIVLAALIAIAPLFFPSGYYFRVGSTIFVNALAVTGIVILTGYAGQISLGHAGFAGIGGY 69 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + GL L + + A +SGA ++G P L+ +G YL +A+L + +L Sbjct: 70 ACALAPVHLGLPSALSVVLGAAVSGALAWLVGRPILRLKGYYLGVASLGFGILVAMVLNN 129 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + +T G GI V D SL F Y + + A + L Sbjct: 130 ERQLTKGPDGIAVPDPGLRSLLKGWSLDLSNGQ---------FWYAMTGIALVIGAWLAL 180 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + A R + ++ A ++ + AKL AF VS+ + ++G+ A I+PD Sbjct: 181 NLYHSPTGRALRALHGSEIAAGTVGIDVAGAKLKAFVVSAVYASVSGSLLALQNRFITPD 240 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + F +I ++++ +LGG+ S++ ++L + ++ Y Sbjct: 241 IAGFMHSIEMVTMAVLGGVGSVAGAIFGASLLTLLPQVLTVFADYEP------------- 287 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + + LV++ L+ + + Sbjct: 288 --LILGLTMMLVMIFLPEGLVPSIMRTIRGRK 317 >gi|225387382|ref|ZP_03757146.1| hypothetical protein CLOSTASPAR_01135 [Clostridium asparagiforme DSM 15981] gi|225046514|gb|EEG56760.1| hypothetical protein CLOSTASPAR_01135 [Clostridium asparagiforme DSM 15981] Length = 352 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 120/326 (36%), Gaps = 24/326 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + V LL F+ + A Y+ ++ + + +++ G G SL Sbjct: 14 LAILVGLVLLTFILIPAMVKSPYMLNIFVLTFYMSTLSMAWNLLGGMTGQNSLGHAAYMG 73 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+ +L + G + WL ++ G I+ P RG Y + ++ E + Sbjct: 74 LGAYACCLLVVKTGANPWLAAIFGMVVVGLVAGIVFYPCFILRGPYFTLVSIAFGESIRQ 133 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++I + + +L S ++ YYV L M Sbjct: 134 VIINSEFFGRASGVGLPFGQDSWLNFRFAS--------------KVPYYYVGLAMMVGIY 179 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I+ + R+ + A +TIR+++ A ++ K+ A +S+ G+ G F+A+ Sbjct: 180 LIMKKIDRSKMGFALKTIREDEDAAAAIGINPTKYKIMAVVISAMVAGLVGFFYASYIRY 239 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I PD+ +++ + ++GG + I+I + E F Sbjct: 240 IDPDLMIQAKSTESVLPAVVGGAAFVEGPIVGGLIMIPLSEYLRA----------NFSAV 289 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L VI R +L Sbjct: 290 LPGINMLMYAVVLLAVIRFRPSGVLG 315 >gi|217969939|ref|YP_002355173.1| ABC transporter [Thauera sp. MZ1T] gi|217507266|gb|ACK54277.1| ABC transporter related [Thauera sp. MZ1T] Length = 597 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 13/306 (4%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y ++ I +Y M A GL ++ G GL S +GAY+ L + L WL Sbjct: 23 SPYYVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGLGAYTTAALTTATDLPGWLA 82 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 ++ ++ + L + I Sbjct: 83 WAGTSPWLTLAVGLLLTALVAVLIGSLTLKLSGHFLPLGTIA------WGISLYFLFGTM 136 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 G T S I + +YY++ ++ L + A R ++ Sbjct: 137 ESLGGHTGISGIPAIGLLGWTLDEGGEIYYLIWAFLLVAMLTTHNLLDSREGRAIRALKG 196 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + ++ +++ F +++ +G +A + ++P F I + + ++ Sbjct: 197 GRVMAEAMGVDTSRSRMVIFVIAALLACASGWLYAHMQRFVNPTPFGVHIGIEYLFMAVV 256 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG + ++ + + + F T + + + LV+ Sbjct: 257 GGAGYVWGAIVGAGVITVLKQWLQNWLPSLLGATGNF-------ETIVFGLLMVLVLHRA 309 Query: 336 SHSLLR 341 L Sbjct: 310 REGLWP 315 >gi|293603961|ref|ZP_06686375.1| ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292817654|gb|EFF76721.1| ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 612 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 115/325 (35%), Gaps = 22/325 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L V+ ++L + ++ + I + + GL ++ G GL S + Sbjct: 4 ILLAVFIVVLAGLPLVPVTPEFWVTQLNYIGLASLVVLGLVLLTGVGGLTSFGQAAFVGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ L ++Y +S WL +P +++ ++G +L+ G YL + T+ + Sbjct: 64 GAYTTAYLTTQYDVSPWLALPAGLILTAVVAYLLGAITLRLSGHYLPLGTIAWGLSLYFL 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + GI + L + +YY++ L+ Sbjct: 124 FGNIDWL-GKHDGIAGIEPLSLF--------------GISLASGRNIYYLIWVFVLLALW 168 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L + A R ++ S+ K+ F ++ ++G +A + + Sbjct: 169 ATRNLLNSRPGRAIRALKSGAGMAESMGVNTAAYKVVIFVWAALLACISGWLYAHMQRAV 228 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F + I + + ++GG + + +++ + + ++ F Sbjct: 229 SPSPFGVNYGIEYLFMAVVGGAGYVWGALLGSGVILVLKDQLQNWLPKLLDTNANF---- 284 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L L++ + L Sbjct: 285 ---EMIVFGVLLILMLQYARNGLWP 306 >gi|317126246|ref|YP_004100358.1| inner-membrane translocator [Intrasporangium calvum DSM 43043] gi|315590334|gb|ADU49631.1| inner-membrane translocator [Intrasporangium calvum DSM 43043] Length = 335 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 118/284 (41%), Gaps = 8/284 (2%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L + YI + +I+ + A L++V+G GLLS+ +G Y+ Sbjct: 13 VAVFALLIAAPWFVPSAYIFHLATMSVIWSITAVALNLVMGYTGLLSVAHGALAIVGGYT 72 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L + WL + +++ G ++G+ +L+ RG Y AI+TL + +L KW Sbjct: 73 SSLLVVNASANFWLSFLIGGVVAAISGFLLGVLTLRLRGHYFAISTLAFGIVVGLVLEKW 132 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T G GI + S + ++ Y+ + + ++ ++ Sbjct: 133 ESVTGGARGITYIPPA--------PSVPLPGGGSLGLDSDLAKYFFAVALLAITVLVVRN 184 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + A IR N S ++ KL AF +S+ G+AG +A +SP+ Sbjct: 185 IVDSRFGRALAAIRSNDLVARSQGVDVVRHKLIAFTISAFMAGLAGTVYATYLAYLSPND 244 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 + ++ V+LGGM + + ++ V E + Y Sbjct: 245 ASLWTSFFILMYVVLGGMGTTWGPILGSFFVVMVPEWLRLFDEY 288 >gi|237653603|ref|YP_002889917.1| ABC transporter [Thauera sp. MZ1T] gi|237624850|gb|ACR01540.1| ABC transporter related [Thauera sp. MZ1T] Length = 604 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 105/332 (31%), Gaps = 31/332 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ + L + + ++ I +Y M A GL ++ G GL S +GA Sbjct: 9 LVMAAFVALLAVAPLVLSAFYVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGLGA 68 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL---------PSLKFRGDYLAIATLIM 129 Y+ +L + L WL + ++ +L+ G YL +AT+ Sbjct: 69 YTTALLTTSAELPGWLAWAGGSPWLALLVGLVLTVVVAFLIGKLTLRLSGHYLPLATIAW 128 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + G G+ + G +R +YY++ Sbjct: 129 GLSLYFLFGTMGFL-GGHTGLTGIPPISLFGYELRQGEE--------------VYYLVWL 173 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 L + A R ++ ++ +++ F +++ +G + Sbjct: 174 FVLAGVLTTSNLLDSREGRAIRALKGGMVMAEAMGVDTARSRMVIFILAALLACASGWLY 233 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + ++P F I + + ++GG + ++ + + + F + Sbjct: 234 AHMQRFVNPTPFGLHIGIEYLFMAVVGGAAHVWGALVGAGVITVLKQWLQDLLPKLFGTS 293 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F + + LV+ L Sbjct: 294 GNF-------EVIFFGVLMVLVLHKARGGLWP 318 >gi|119025463|ref|YP_909308.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium adolescentis ATCC 15703] gi|118765047|dbj|BAF39226.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium adolescentis ATCC 15703] Length = 373 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 138/341 (40%), Gaps = 42/341 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + VV +L + + YI + + I ++ L++ +G LG L+L C A Sbjct: 16 AVGIVVLFGILMGVCESGMASTYIKGIMMTSCIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75 Query: 76 IGAYSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 IGAYS + + L L +++ G+++G+P+L+ GDYLAI T Sbjct: 76 IGAYSAALLSKLLVANGVAMDPTLRFLLTTLAGGVVACIFGILVGIPALRLHGDYLAIIT 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ K L + + I + YV Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIDRLANLYV 177 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++ ++ R+ A + IRD++ A + I + K+ FA+S+ F G+AG Sbjct: 178 VFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAASASGINITYMKVLVFAISAFFAGIAG 237 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA ++P M + ++I + +V+ GGM SL+ + L + EL + Y Sbjct: 238 GIFAQYIGSLNPAMAGWLQSINYVIMVVFGGMGSLTGSIVSAIALTILPELLRAFSTY-- 295 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL L+++ R + S Sbjct: 296 -------------RMLVYSVALVLIMIFRPQGIFGNWEFSL 323 >gi|33602127|ref|NP_889687.1| putative ABC-transporter permease component [Bordetella bronchiseptica RB50] gi|33576565|emb|CAE33643.1| putative ABC-transporter permease component [Bordetella bronchiseptica RB50] Length = 318 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 132/332 (39%), Gaps = 24/332 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L Y +G I + + G+ I+ G G +SL IG Y Sbjct: 10 LIVLAALIAIAPLFFPSGYYFRVGSTIFVNALAVTGIVILTGYAGQISLGHAGFAGIGGY 69 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + GL L + + A +SGA ++G P L+ +G YL +A+L + +L Sbjct: 70 ACALAPVHLGLPSALSVVLGAAVSGALAWLVGRPILRLKGYYLGVASLGFGILVAMVLNN 129 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + +T G GI V D L + + F Y + + A + L Sbjct: 130 ERQLTKGPDGIAVPDP---------GLRSLLKGWGLDLSNGQFWYAMTGIALVIGAWLAL 180 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + A R + ++ A ++ + AKL AF VS+ + ++G+ A I+PD Sbjct: 181 NLYHSPTGRALRALHGSEIAAGTVGIDVAGAKLKAFVVSAVYASVSGSLLALQNRFITPD 240 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + F +I ++++ +LGG+ S++ ++L + ++ Y Sbjct: 241 IAGFMHSIEMVTMAVLGGVGSVAGAIFGASLLTLLPQVLTVFADYEP------------- 287 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + + LV++ L+ + + Sbjct: 288 --LILGLTMMLVMIFLPEGLVPSIMRTIRGRK 317 >gi|317154544|ref|YP_004122592.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] gi|316944795|gb|ADU63846.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] Length = 348 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 68/322 (21%), Positives = 125/322 (38%), Gaps = 16/322 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V ++ L + S+ I I V+ A GL+++ G G +SL +GA Sbjct: 26 LMVGLFVVALLAAPMALSIHHTSIMNLIFISVIGAVGLNLLTGVCGQISLGHGAFIGVGA 85 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ + I +I+ GM+ G+PSL+ +G YLAIATL + + + + Sbjct: 86 YAAGQCSLHGVP-FPMAILAGGLITAMVGMVFGIPSLRLKGIYLAIATLAAQLVLEYVFL 144 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G +G+ + YY+L + ++ Sbjct: 145 HGGALTGGSSGLLLEPPRILGFAFDSEARM---------------YYLLFFFAACALLLV 189 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + RT A+ +IRD + + + + KL AF VSS G+AG + IS Sbjct: 190 SNIMRTKYGRAFVSIRDFHLSAEIVGVNLFWYKLVAFGVSSFLAGVAGGLWGHYTGYISA 249 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++++I+GGM S+ ++ + E + L Sbjct: 250 EQFNIGLSISYLAMIIIGGMGSVLGSVFGAVFIVLLPEALNVLANGLGGFLPDIAQHLVA 309 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 + + L L ++ L+ Sbjct: 310 LREGVFGLVLILFLIFEPEGLV 331 >gi|170290867|ref|YP_001737683.1| ABC-type branched-chain amino acid transport system, permease component [Candidatus Korarchaeum cryptofilum OPF8] gi|170174947|gb|ACB08000.1| ABC-type branched-chain amino acid transport system, permease component [Candidatus Korarchaeum cryptofilum OPF8] Length = 317 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 89/321 (27%), Positives = 144/321 (44%), Gaps = 29/321 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 Y L L L + YI + I I++Y + A L I+VG G LSL YAIGAY+ Sbjct: 16 YALAFILLLPLPLAGDYITHIAIMIMLYSITAASLDILVGYTGRLSLGHAAFYAIGAYTS 75 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L ++ W+ I + +++ G+I+G+PSLK +G YLAI+TL I Q +LI Sbjct: 76 TLLSMNLNVNPWIGIIIGGILASIFGLILGIPSLKLKGPYLAISTLGFGVIVQLMLINLD 135 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +TNG GI L +R + YYV L + LS + L Sbjct: 136 WLTNGPIGIPNIPPLPGGPIDLR--------------IKSSFYYVALILTLLSIFFLHLL 181 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 ++ + IR+++ A S+ + F K+ AF +++ F G++G +A ISP M Sbjct: 182 TKSRVGKILVAIREDEDAALSVGVNVSFFKIFAFIIATFFAGLSGGLYAHYIRYISPAMS 241 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 SE+I ++S+ I+GG +L A+L + E+ Y Sbjct: 242 ALSESINILSMTIIGGFGTLVGPLMGAALLTILQEVLRPYLEY---------------RY 286 Query: 322 TLMVIALFLVILMRSHSLLRL 342 + + +V+ + L Sbjct: 287 LIYGGLIVVVMKFFPSGIYGL 307 >gi|282600843|ref|ZP_05979870.2| high-affinity branched-chain amino acid ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] gi|282571104|gb|EFB76639.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] Length = 358 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 79/334 (23%), Positives = 144/334 (43%), Gaps = 22/334 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R K + I + + + +++ A + I YV+ A L++ VG LG L Sbjct: 8 RSTKSNLITFGIVIAFYIVVQALSAAGLLSNSFSGQLVPICAYVIMAVSLNLTVGILGEL 67 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIW------LLIPVSAMISGACGMIMGLPSLKFRGD 120 SL ++GA+S ++ S+ L V +++G G ++G+P L+ GD Sbjct: 68 SLGHAGFMSVGAFSGTLVWVSINSSMPQPLALLLSFVVGGLVAGIFGFLVGVPVLRLSGD 127 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLAI TL EI +N++ + G++ + + + I + Sbjct: 128 YLAIVTLAFGEIIKNVM-NACYLGVDANGLHFSLKDASSLNMEDGKVLINGAQGITGITK 186 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + + + + L+ +IL L + A +IRDN+ A S+ I KL AF S+ Sbjct: 187 ASSFTIGIVLVILTLLVILNLVNSRAGRAITSIRDNEIAARSVGIPITKYKLMAFVTSAV 246 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G+AG ++ + + F ++ +I+++ V+LGG+ +L A AIL + E+ Sbjct: 247 FAGIAGVLYSLNYSSLVAKKFDYNTSILILVFVVLGGIGNLRGSVIAAAILTVLPEMLRS 306 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 MN Y + I L +V++ Sbjct: 307 MNDY---------------RMLIYAIVLIVVMIF 325 >gi|163855965|ref|YP_001630263.1| putative branched-chain amino acid transport system protein [Bordetella petrii DSM 12804] gi|163259693|emb|CAP41994.1| putative branched-chain amino acid transport system protein [Bordetella petrii] Length = 596 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 66/325 (20%), Positives = 124/325 (38%), Gaps = 28/325 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + ++ +L Y + +L++ F +++ G GL+S + + Sbjct: 7 FVIMLAVAAAYLGAALLVDNSYHQLIFTLVLVWACFGLSWNMLSGYTGLVSFGHAAFFGL 66 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ V+ GLS WL+IP++A+I G+++GLP+ + RG Y A+A L + Sbjct: 67 GAYAAVLGQINLGLSPWLMIPLAAVIGAVAGLLVGLPTFRLRGHYFALAMLAYPLALLYV 126 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++R V + M L Sbjct: 127 FEWLGY-----------------QEVTFPMVRENPAWFMQFSNPWLYTVVAMAMLLLFVQ 169 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 I ++ RT A I+ N+ A + + KL A A+S A G GAF+A + Sbjct: 170 ITRYVERTRFGMALIAIKQNEAAAEAAGIDTLRWKLKAIALSGAIAGATGAFYAVVLLVV 229 Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +P F + +++ + GG+ ++ AILI + E+ + + Sbjct: 230 TPVSVFGMLVSAQALTVAMFGGVGTVWGPIIGAAILIPLGEILHA----------ELGAT 279 Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340 + ++ A+ VIL+ + Sbjct: 280 YPGIQGVILGAAIIAVILVAPEGVF 304 >gi|225175946|ref|ZP_03729938.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1] gi|225168534|gb|EEG77336.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1] Length = 294 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 41/307 (13%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + + I ++ L+IV+G GLLSL +IGAY+ IL Y + + Sbjct: 3 SAYYTQILTLVGINIILVASLNIVIGYTGLLSLGHAAFMSIGAYTASILTVYYDVPFFAA 62 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + A+ + G+I+GLP+LK RGDYLAIATL EI + I+I + IT G G+ R Sbjct: 63 LLAGALFASVFGIIIGLPTLKLRGDYLAIATLGFGEIVRIIIINME-ITRGPLGLTGIPR 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 +++ LS + L+R+ + A IR+ Sbjct: 122 HT-------------------------SLWLVYLFVILSLLVFYRLKRSRVGRAMIAIRE 156 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A ++ + K++AFAV++ F G AG FA I+P+ F F +I ++ +V+L Sbjct: 157 DETAAEAMGINTTYYKVTAFAVAAFFAGTAGGLFAHYFRYINPNNFGFMRSIEILVMVVL 216 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM ++ +L E+ + Y + AL ++L+R Sbjct: 217 GGMGNMVGSVVGATVLTAAPEMLRAVADY---------------RMLIYGAALVAMMLIR 261 Query: 336 SHSLLRL 342 LL Sbjct: 262 PQGLLGE 268 >gi|260426838|ref|ZP_05780817.1| branched-chain amino acid ABC transporter, permease protein [Citreicella sp. SE45] gi|260421330|gb|EEX14581.1| branched-chain amino acid ABC transporter, permease protein [Citreicella sp. SE45] Length = 1065 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 123/310 (39%), Gaps = 34/310 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 +++++ ++ + ++I+ +FA L ++GS GL+S + GAY+ +L Sbjct: 772 PVFAEQFVMTLIVDMIIFALFAASLHFILGSGGLVSFGHAAFFGGGAYAAALLVYHTDTP 831 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + L + + +G + +G ++ G Y A+ TL S++ ++ +W+ +T G G+ Sbjct: 832 MELAFLFAPLAAGLLALAIGWFCIRLTGVYFAMLTLAFSQLVWSVAFQWRDVTRGDDGLV 891 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + YYV L + + + + A R Sbjct: 892 NIWPAEW------------------LNAPAPFYYVTLALGVGGIVFLRHVIHSPFGYALR 933 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 RD+ + + + + +AFA++ A G+AG F S+ + P + E+ + Sbjct: 934 AGRDSPRQAEATGIDVKRVQYAAFALAGAMAGLAGGLFVFSKGSVFPTTLEIGESFDALI 993 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V LGG+ +L+ + V + + L+ + + V Sbjct: 994 VVFLGGVKTLAGGVVGAGFMTVVEDWLTRL----------------EYWRLLLGLVIIAV 1037 Query: 332 ILMRSHSLLR 341 +++ ++ Sbjct: 1038 VILMPEGIVG 1047 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 105/315 (33%), Gaps = 29/315 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYG 89 A +++ + ++ + A GLS++ G +++ Y +GA+ V + Sbjct: 448 AFFLAQFLTGLANAAALF-LVASGLSLIFGVTRIVNFAHGSFYMLGAFIGVTLMEILPGH 506 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + W I ++ + G G ++ + L+ + L+ + ++ + G Sbjct: 507 VGFWGAILLTGLAVGLIGAVVEMVVLRPIYRAPELFQLVATFGVILVIQDLALMIWGAED 566 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 G + + ++ F+ ++ + RT + Sbjct: 567 RMGPRAPGLRGV----------WRIFGEPVPKYDIVLIAITPFILFALWYLITRTRLGVL 616 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R +++ +L + FA+ SA G+ GA + F+ V Sbjct: 617 VRAATQDREMVGALGVNQAWLFTGVFALGSALAGLGGALQLPKGGA--DLLMDFNIIGAV 674 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +V++GGM SL A ++ + LM + + Sbjct: 675 FVVVVIGGMGSLPGAFIAAVLISVLNVFGVTY--------------LPQSTLVLMYVVMA 720 Query: 330 LVILMRSHSLLRLRT 344 +V+++R + LL Sbjct: 721 IVLIVRPYGLLGREE 735 >gi|220923657|ref|YP_002498959.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060] gi|219948264|gb|ACL58656.1| ABC transporter related [Methylobacterium nodulans ORS 2060] Length = 603 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 125/313 (39%), Gaps = 26/313 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 ++ + I I ++ + +IV G G LSL I Y IGAY VIL + Sbjct: 38 PVALDNAFVYHVFITICVFAALSTAWNIVGGFTGQLSLGHGIFYGIGAYCGVILMGMG-I 96 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S WL + A +S + + P + RG + ++AT+ E+F+ + + ++ IT G G+ Sbjct: 97 SPWLGMFAGAALSVLVAVAISYPCFRLRGPFFSLATIAFLEVFRVLALHFREITGGATGL 156 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + +L + R + + GM ++ + ++R + Sbjct: 157 MIPLKLGWEWMVFRER--------------LPQLAIAFGMLLVTLGVAWFVRWRRLGYYL 202 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIV 269 R+ A + + +L A +VS A M G F A I P MF + +I + Sbjct: 203 VATRERASAAQAAGVDTVRVRLIAVSVSGALTAMVGTFHAMYLTFIEPAAMFSLTLSIQI 262 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++GG+ ++ +L+ + EL G L F + I L Sbjct: 263 AMFALIGGIGTVFGPLMGAVLLVPITELARGWLGAKALGLHGF----------VYGIVLM 312 Query: 330 LVILMRSHSLLRL 342 LV+L + L+ L Sbjct: 313 LVVLFMPNGLMGL 325 >gi|288871322|ref|ZP_06117218.2| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Clostridium hathewayi DSM 13479] gi|288863879|gb|EFC96177.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Clostridium hathewayi DSM 13479] Length = 364 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 141/337 (41%), Gaps = 24/337 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + + I + + +++ + + + + + + IY + A L++ VG LG L Sbjct: 14 KTTRSNLITYGIVIAAYIIVEILISGGHMSSLMKGLLVPLCIYTIMAVSLNLTVGILGEL 73 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLL-------IPVSAMISGACGMIMGLPSLKFRG 119 SL +GA++ + +I + I V A + A G+++G+P L+ RG Sbjct: 74 SLGHAGFMCVGAFASSLFSICMLDTIPIAGIRFTLAILVGAAAAAAAGIVVGIPVLRLRG 133 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +N++ + L I Sbjct: 134 DYLAIVTLAFGEIIKNVVNVIYLGKDSNGIHVSIKNAMALQMQEDGQIIMNGAQGINGTP 193 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + + V + + ++ I+L L + A ++RDN+ A S+ I KL AF +S+ Sbjct: 194 KNATFTVGIILILITLFIVLNLIHSRSGRAIMSVRDNRIAAESIGINITKYKLMAFTISA 253 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+AG ++ + ++ F N I+++ V+LGG+ ++ A IL + E+ Sbjct: 254 SLAGVAGVLYSHNLSALTATQKNFGYNQSIMILVFVVLGGIGNIRGSMIAAVILTLLPEM 313 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 G+N Y + I L ++++ Sbjct: 314 LRGLNTY---------------RMLIYAIILIVMMIF 335 >gi|91977601|ref|YP_570260.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91684057|gb|ABE40359.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 411 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 126/349 (36%), Gaps = 14/349 (4%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ + LL ++ + T + + IY +FA G +I+ G G Sbjct: 1 MKHTSKLADIALLVGFAIVVALGPVIFTPIGAGYPDLLQKFAIYGIFAIGFNILFGLTGY 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LS +G+Y+ V + + + S +++G + +G SL+ G Y +I Sbjct: 61 LSFGHAAFLGVGSYAAVWSFKLLSMDLLPAVAFSVILAGLLALAIGFISLRRSGIYFSIL 120 Query: 126 TLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL +++ N+ PITNG+ G+ V + + + I + Sbjct: 121 TLAFAQMCYNMAYSVLTPITNGETGLRVLRQDPRHLDAMLGYVSPTPSLLGLPITGWTGF 180 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y+ + + + + + R+ R I+ NQ LSAF +S F G+ Sbjct: 181 YICGAVLVAAFGVSIAIFRSPFGMTLRAIKSNQNRMGYTGYHTRPYLLSAFVISGMFAGL 240 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA AA+ + + +++ + V+ + ILGG +L T ++ + N Sbjct: 241 AGALLAATDPLVGAERMQWTASGEVVLMTILGGSGTLLGPVLGTGLIKYFENIFSAYNEQ 300 Query: 305 YFNSLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340 + F + + V+ ++ Sbjct: 301 QLQLIFAFLPDAVRDGVVKTASLFVGEGWQLTLGLLFMAVVCFLPGGIM 349 >gi|296532055|ref|ZP_06894832.1| high-affinity branched-chain amino acid transport system permease protein [Roseomonas cervicalis ATCC 49957] gi|296267617|gb|EFH13465.1| high-affinity branched-chain amino acid transport system permease protein [Roseomonas cervicalis ATCC 49957] Length = 601 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 124/310 (40%), Gaps = 26/310 (8%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + ++ + I I +Y A +IV G G LSL I Y IGAY+ + G+S W Sbjct: 39 INDDFVFHVFITICLYGALATAWNIVGGFAGQLSLGHAIFYGIGAYTAGL-LVPLGISPW 97 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + A +S G+ +GLP + RG + A+AT+ ++ + + + + +T G G+ V Sbjct: 98 IGMLAGAALSALLGIGIGLPCFRLRGPFFALATIAFLQVIRLLALHFTGLTGGAVGLMVP 157 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + + G+ L+ + ++R Sbjct: 158 LQTGWQWMIFFERW--------------PSLLIAFGLLTLTLGVAGYIRHARFGYYLVAT 203 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISI 272 R+ + A + + +L A A+S+A M G F I P+ MF + ++ + Sbjct: 204 REREPAAAAAGVNTLRVRLQAVAISAALTSMVGTFHGMYLTFIEPEAMFSLAFSVQIAMF 263 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V++GG+ ++ T +++ + EL G L F + L L++ Sbjct: 264 VLIGGIGTVLGPLLGTLLVVPLTELARGWLGASALGLHGF----------VYGTVLVLIV 313 Query: 333 LMRSHSLLRL 342 L L L Sbjct: 314 LFVPDGLAGL 323 >gi|209518785|ref|ZP_03267599.1| inner-membrane translocator [Burkholderia sp. H160] gi|209500755|gb|EEA00797.1| inner-membrane translocator [Burkholderia sp. H160] Length = 607 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 78/333 (23%), Positives = 131/333 (39%), Gaps = 29/333 (8%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N+ + + + L L Y+ IY + A L++V G++G +SL Sbjct: 302 NRRALRIPRRTIAAVVALAFVLPLVVPSSYVLQTLTNGWIYGLLALSLTLVAGTVGQISL 361 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 IGAY+ +L S L IP++ +I+ A G ++ PS + RG Y++IATL Sbjct: 362 GHAALLLIGAYASALLSINLAWSPALTIPLAGLITAAIGTVLVYPSFRLRGHYVSIATLG 421 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + EI +++ W +T G GI L G + + +Y+ L Sbjct: 422 IGEIIGLVVLNWDSLTRGPVGITGIAPLSLFGWQLTGVR--------------AVYWFTL 467 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + L A + + L + + WR IR++ A + K AFA G+ G Sbjct: 468 AVLVLLALLQVRLLHSHLGRTWRAIREDDVAARAYGIRPNRYKAIAFACGGLAAGIGGGI 527 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A I+ F +I+ +++VILGG+ S+ LI + EL Y Sbjct: 528 AAHLYSYINYQTFDSQVSILALTMVILGGLGSVIGALAGALALISLPELFRFAADY---- 583 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + L L++ R L Sbjct: 584 -----------RMLIYGVILLLLVRFRPQGLFG 605 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 101/309 (32%), Gaps = 25/309 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +G + + +R GL + + + Sbjct: 6 DYTINGVIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGGFIGWLCLTRLGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + G+++ L+ IA L+ + +L + I G Sbjct: 66 VATVAGCALLGILIERIGLRPLQGAARIAPLLATIGISFVLDQLAQIVFGPDPRP----- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 V S + + + + + + ++LR T + A R + Sbjct: 121 ------VPSTLPEWTLSIGGATIGSLDLLIAVIGVGAAGVLYVFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ G++G + I P M F + + +++G Sbjct: 175 RDAAQQMGVNVNAVNQAVFAIACGLGGLSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFVLLLLFLV-------------WRP 280 Query: 337 HSLLRLRTP 345 + L Sbjct: 281 NGLFSASRR 289 >gi|154486890|ref|ZP_02028297.1| hypothetical protein BIFADO_00723 [Bifidobacterium adolescentis L2-32] gi|154084753|gb|EDN83798.1| hypothetical protein BIFADO_00723 [Bifidobacterium adolescentis L2-32] Length = 373 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 138/341 (40%), Gaps = 42/341 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + VV +L + + YI + + I ++ L++ +G LG L+L C A Sbjct: 16 AVGIVVLFGILMGVCESGMASTYIKGIMMTSCIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75 Query: 76 IGAYSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 IGAYS + + L L +++ G+++G+P+L+ GDYLAI T Sbjct: 76 IGAYSAALLSKLLVANGVAMDPTLRFLLTTLAGGVVACIFGILVGIPALRLHGDYLAIIT 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ K L + + I + YV Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIDRLANLYV 177 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++ ++ R+ A + IRD++ A + I + K+ FA+S+ F G+AG Sbjct: 178 VFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAASASGINITYMKVLVFAISAFFAGIAG 237 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA ++P M + ++I + +V+ GGM SL+ + L + EL + Y Sbjct: 238 GIFAQYIGSLNPAMAGWLQSINYVIMVVFGGMGSLTGSIVSAIALTILPELLRAFSTY-- 295 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL L+++ R + S Sbjct: 296 -------------RMLVYSVALVLIMIFRPQGIFGNWEFSL 323 >gi|221636042|ref|YP_002523918.1| leucine/isoleucine/valine transporter permease subunit [Thermomicrobium roseum DSM 5159] gi|221158070|gb|ACM07188.1| leucine/isoleucine/valine transporter permease subunit [Thermomicrobium roseum DSM 5159] Length = 557 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 90/329 (27%), Positives = 157/329 (47%), Gaps = 36/329 (10%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++L L + ++ ++ + Y++ GL++V+G GLL L V +A+GAY+ Sbjct: 232 LVVILLLASVPLWAGLFLSNVADFVGFYILMGLGLNLVLGFAGLLDLGYVAFFAVGAYTM 291 Query: 82 VILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 +L S + L W+ +P++ +++ G+++GLP L+ RGDYLAIATL EI + + Sbjct: 292 AVLTSPEIGQRFTLDFWVALPIAIVLTVCAGLLVGLPVLRMRGDYLAIATLGFGEIVRLL 351 Query: 137 LIK--WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ KP G G+ R + S F Y ++L C L+ Sbjct: 352 VLSDWLKPYLGGAQGVTRIARPQIGPLRIDSPQEF--------------YVLVLLSCLLA 397 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + LR + + AW IR+++ ++ + AKLSAFA+ ++F G++GA FA+ Sbjct: 398 WFLSIRLRDSRLGRAWFAIREDEFVAQAMGINRVTAKLSAFAIGASFGGLSGALFASLVG 457 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F +I V+++++LGGM SL + L+G+ EL Y Sbjct: 458 SVVPASFSLLVSINVVALLVLGGMGSLPGVVVGALALVGIPELLREFQEY---------- 507 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + I L ++L R LL R Sbjct: 508 -----RLLVYGIVLIAMMLFRPAGLLPER 531 >gi|308050732|ref|YP_003914298.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Ferrimonas balearica DSM 9799] gi|307632922|gb|ADN77224.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Ferrimonas balearica DSM 9799] Length = 357 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 131/326 (40%), Gaps = 19/326 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ + Y ++ IQI + A GL+I+VG G +SL + GA Sbjct: 30 ALAVAFIALACSAPWVLDAYYLTLFIQISYLGIAALGLNILVGFTGQISLGHGAFFGFGA 89 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 ++ + +++ + + IP++ ++ GM+ G+P+ + +G YLAIATL I ++ Sbjct: 90 FASAWMNTQFNIPVVFCIPLAGFLTMGVGMMFGMPAARIKGLYLAIATLAAQFIIEDFFA 149 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + + G AG F Y++ L Sbjct: 150 RAEWFSGGSAGSMAEPVSLFGFAFDTDE---------------SFYFIALFALVFMYLWG 194 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ A+ +RD+ + + + +L +F +SS + G+ GA +A +S Sbjct: 195 SNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFYAGIGGALYAHYLGYVSA 254 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG----MNFYYFNSLLKFDC 314 + F ++ +++VI+GG+ S+ ++ + E+ G M + ++ + Sbjct: 255 EGFTILMSVQFLAMVIIGGLGSVKGTLMGCVFMVLLPEVLEGGVGLMKQTEWGNIPQVVD 314 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLL 340 + + + L ++ L Sbjct: 315 GLAYLKEMAIGLVIILFLIFEPQGLA 340 >gi|322419264|ref|YP_004198487.1| inner-membrane translocator [Geobacter sp. M18] gi|320125651|gb|ADW13211.1| inner-membrane translocator [Geobacter sp. M18] Length = 300 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 131/315 (41%), Gaps = 38/315 (12%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 FL Y+ + + + I ++ A GL+++ G G LSL +IGA++ ++ Sbjct: 4 FLNSLVGSVDPYLMQILVNVGIAIVLALGLNVITGLTGQLSLGHAAFMSIGAFTSAMVTI 63 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + GL + V+ +++ ++G P L+ GDYLAI TL +EI + + ++ Sbjct: 64 KTGLPFAANLAVTGVVTAIVAAMIGFPILRLTGDYLAICTLGFAEIVKVFFLNFE----- 118 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + I M + + L+ ++ +++ + Sbjct: 119 ------------------PTNKALGLTVPAAKTSIPMPIYVWVVAILAIVLVTFVQNSRF 160 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A + IR+++ A ++ K+ AFA+ S G+ G +A I+P F F ++ Sbjct: 161 GRALKAIREDEIAADAMGINTAKYKIKAFALGSFMAGVGGGLYAHFLSYINPSDFGFLKS 220 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + ++++V+LGG+ S+ +++L E M+ Y + Sbjct: 221 VDILAMVVLGGLGSVPGAVIGSSVLASAPEFLRFMSQY---------------RMLVYGA 265 Query: 327 ALFLVILMRSHSLLR 341 L +++ R + LL Sbjct: 266 LLVFLMVFRPNGLLG 280 >gi|254474868|ref|ZP_05088254.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria sp. R11] gi|214029111|gb|EEB69946.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria sp. R11] Length = 361 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 71/325 (21%), Positives = 136/325 (41%), Gaps = 17/325 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V L+L + ++ +LI+ + GL ++ G G SL AIG Sbjct: 22 LIVYGALILLALVLPFLINEFYIGEVTNVLIWAIAGLGLMLLTGQTGQASLGHAAFLAIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ IL + L P++ +I+G G I+ +P+L+ G YLAIAT+ +S + +I+ Sbjct: 82 CYTNTILIEQGLP-FLLAFPLAGVITGVVGAIIAIPALRLHGIYLAIATIALSILADDII 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + +P T G +G +IR F + YY++L + + Sbjct: 141 VLLEPWTGGVSGK------------FPDVIRVFGMEIERWTMPVRFYYLVLAVAVMCTLF 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + R+ + A+ +RD++ + ++ I K +AF +S G AGA + Sbjct: 189 YRNILRSPLGRAFAAVRDSEVSATAMGVHIARTKATAFGLSCMITGWAGALMGYYAGAFN 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + F +I ++ ++++GG+ S+ ++ + + + S+L + Sbjct: 249 NETFSLVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQGLSILKD----SVLGSGVAIP 304 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 T + + L L IL L Sbjct: 305 GLETGVFGMILILFILFEPMGLYGR 329 >gi|229823473|ref|ZP_04449542.1| hypothetical protein GCWU000282_00771 [Catonella morbi ATCC 51271] gi|229787248|gb|EEP23362.1| hypothetical protein GCWU000282_00771 [Catonella morbi ATCC 51271] Length = 319 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 82/340 (24%), Positives = 151/340 (44%), Gaps = 42/340 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R ++ + + A++ LL+L Y I+I+I V++A GL++V+G G Sbjct: 3 RFHQRNFVWLTAALLGYGLLWLLTSTNLIDSYYQITLIKIMIDVIYAIGLNLVLGVAGQF 62 Query: 67 SLNCVIAYAIGAYSYVILGSRYGL--SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 SL A+GAYS I +R+ +W + V A+++ +++G+P+L+ RGDYLAI Sbjct: 63 SLGHAAFIAVGAYSGAIFATRHADLGGLWTGMLVGAVVAAVLAVLVGIPTLRLRGDYLAI 122 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 ATL +SEI + ++ +K +TNG GI ++ + Sbjct: 123 ATLGVSEIIRVVITNYKTLTNGPQGINAIP-------------------------KVATW 157 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 ++ ++ +IL ++ A I ++ A S+ + K+ AF + + + Sbjct: 158 PLVYFFMVVTTILILNYFYSSAGRATYAIEQDEIAAESMGVNVTKYKVIAFVLGAITAAI 217 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 GA +A + ++P F F+++I V+ IV+ GG+ S + A +L + L Sbjct: 218 GGALYAGNIGVVTPGDFTFNKSIDVLIIVVFGGIGSFTGSFVAAVVLGILNTLLQPY--- 274 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + IAL L+++ R LL Sbjct: 275 ------------GQLRMVIYAIALILIMIFRPGGLLGTWE 302 >gi|296122555|ref|YP_003630333.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776] gi|296014895|gb|ADG68134.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776] Length = 372 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 40/354 (11%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + + FL ++ Y + I I ++ A L+IV G G S+ I Sbjct: 24 ILVGIALAIGIQFLLPSRVGLYYSRLVIDAGIAMILAVSLNIVNGMTGQFSIGHAGFMTI 83 Query: 77 GAYSYVILGSR------------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 GAY+ + + + + G ++GLPSL+ R Sbjct: 84 GAYTAGSITFYSSLLIWGTAAKHGSFLGSGEWMFVIACLCGGITASIAGFVVGLPSLRLR 143 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL EI + +L + + + I A F V I F P Sbjct: 144 GDYLAIVTLGFGEILRVVLQQTGKVVDNAETIRNAPLATFATVPVGGAIGFDGIP----- 198 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + + + + ++ L+R++ A ++R+++ A ++ KL AF + Sbjct: 199 -KYTILFWVYAFLAITVIFAYRLKRSSFGRAMLSVREDEIAAQAMGINTSRQKLLAFVTA 257 Query: 239 SAFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + F G+ G A S ISP F + + + +LGG S++ + A +L + E+ Sbjct: 258 AFFAGVGGGLLAHESGVIISPKDAGFQRSFDYVIMTVLGGRGSITGVMLAAILLSALPEV 317 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 Y + L ++L R L + +F + Sbjct: 318 LRDFERY---------------RIIIYAALLIFMMLSRPQGLFGIHEIWDFFPK 356 >gi|160943797|ref|ZP_02091028.1| hypothetical protein FAEPRAM212_01295 [Faecalibacterium prausnitzii M21/2] gi|158444971|gb|EDP21974.1| hypothetical protein FAEPRAM212_01295 [Faecalibacterium prausnitzii M21/2] Length = 342 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 39/340 (11%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ L+ V + ++ Y + + + + I ++ A L++ G LG L L Sbjct: 13 RYLMNLVLVGLLFVGLSYVTGNMLSTYQNKVLLTVGINIILAVSLNVATGYLGQLPLGHA 72 Query: 72 IAYAIGAYSYVILGSRYGLS----IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 A+GAY+ + GL + + ++ +I+G G+++G+P+L+ GDYLAI TL Sbjct: 73 GFMAVGAYACALFTKSSGLPKGVAFAIGLVLAWVIAGLFGVLIGIPALRLTGDYLAILTL 132 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + L + F+ I + + + Sbjct: 133 GFGEIIRITLNNIDDVLG--------------------FKLFYGSKGLKNIPKYSNFTNV 172 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ +I + ++ A IRDN+ A S + K+ AFA S+AF G+AG Sbjct: 173 FLCVVITCFLIHAMMKSRHGRAVLAIRDNEIAAESCGIQTTYYKVMAFAFSAAFAGLAGG 232 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A ++P F F ++I ++ +V+LGGM S+ + +L + E Y Sbjct: 233 LYACYIGVLNPSTFGFMKSIEILVMVVLGGMGSMLGSILSATVLTILPEATRSFESY--- 289 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L L+++ R LL S Sbjct: 290 ------------RMVVYSLVLVLMMIFRPGGLLGSYDFSL 317 >gi|332995570|gb|AEF05625.1| branched-chain amino acid ABC transporter permease [Alteromonas sp. SN2] Length = 556 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 100/296 (33%), Gaps = 21/296 (7%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ + I + ++ + +G Sbjct: 281 AAIGLAITFGVMGVINMAHGEMIMLGAYTTYVIQITFPSLIEYSLLMAIPAAFLVSGFVG 340 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + +L L + +L + + + + Sbjct: 341 VLIERGVIRFLKGRPL------ETLLATFGVSLILQQLVRTVFSPLNRQVQAPEWMTGSW 394 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + Y+++ + +++L L+++++ R + N+ +L+ + Sbjct: 395 VINPVFSLTYNRLYIIIFSLVVFFTLMLILKKSSLGLHVRAVSQNRDMARALSIKSDWVD 454 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 + F + S G+AG + + + I +V+ GG+ +L A L Sbjct: 455 AATFGLGSGIAGVAGVVLSQLTNV--GPNLGQAYIIDSFLVVVFGGVGNLWGTLVAAMSL 512 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + + + ++++ L L I R L + S Sbjct: 513 GTINKFLEPITGSVLAN-------------IIVLVGLVLFIQKRPKGLFPQKGRSA 555 >gi|116695974|ref|YP_841550.1| ABC transporter permease [Ralstonia eutropha H16] gi|113530473|emb|CAJ96820.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 343 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 125/320 (39%), Gaps = 28/320 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L + Y ++ IY + GL+++ G G L+L AIGAY+ Sbjct: 12 LLLAAAIAFPLITPNSYYLTVMTLAFIYAIATLGLNLITGYTGQLNLAHGGFMAIGAYTL 71 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 IL + + WL ++ +I G ++G+ SL+ +G Y +I T+ + I ++ KW+ Sbjct: 72 GILTVDHQVPFWLAFVLAGVICMVLGYVIGVVSLRLKGHYFSIFTMCVGYIIYLLIEKWE 131 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T+G G+ YY++L + ++ + Sbjct: 132 SLTHGTVGLIGIPVPA-------------AIGPLSFDSVQAQYYLVLFFLAVGTFLMHRI 178 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + ++ +R++ +L ++ K+ +F +S + G AGA +A + PD+ Sbjct: 179 VTSLLGRSFMAVRNSDALAEALGINLMRTKVLSFVLSVGYAGFAGALYAGQVRFLGPDIA 238 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + ++ +++GG+ ++ ++ + + M Y Sbjct: 239 RTDLTFDMVMSMLVGGIGTIFGPLLGAVLVPWITQSLQFMQDY---------------RM 283 Query: 322 TLMVIALFLVILMRSHSLLR 341 + L L+I+ ++ Sbjct: 284 LVFGPVLILLIIFVPDGIVG 303 >gi|328949248|ref|YP_004366585.1| ABC-type transporter, integral membrane subunit [Treponema succinifaciens DSM 2489] gi|328449572|gb|AEB15288.1| ABC-type transporter, integral membrane subunit [Treponema succinifaciens DSM 2489] Length = 338 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 83/335 (24%), Positives = 138/335 (41%), Gaps = 32/335 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V +L+ L LG Y + + + A ++++ G G LSL Sbjct: 15 IAFVCIAVPAVLMDLPLGMPLIDAYTAQIITLAGVNAIMAISVNVICGITGQLSLGQAGF 74 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 A+GAYS VI+ + G+ + + I + +I+ G ++G P+LK GDYLAI TL EI Sbjct: 75 QALGAYS-VIILTEAGIPLPVSILLGGLIAAFLGFLIGFPTLKLEGDYLAIVTLAFGEII 133 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + LI K IT G G F +S Y ++G + Sbjct: 134 RVCLINLKSITGGPNG----------------KQFSTIFTTSLDHSAAISYLAVIGSLVV 177 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 ++ R+ A +R+++ A S + K++ F ++S G+ GA +A Sbjct: 178 IVVLLQNFLRSTYGRAILAVREDEVAANSNGIGVFRYKMTGFVIASFIAGIGGALYAPFI 237 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I PD+ F+ +I + V+LGGM S++ A +L + E + Y Sbjct: 238 GFIKPDLASFNNSINDLIFVVLGGMGSITGGILAAFVLTILQEALRFLRDY--------- 288 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L V+L R LL + S Sbjct: 289 ------RLLIYPVVLIFVMLFRPQGLLGTKELSFI 317 >gi|115525848|ref|YP_782759.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115519795|gb|ABJ07779.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 411 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 65/349 (18%), Positives = 128/349 (36%), Gaps = 14/349 (4%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ + LL ++ + T + + IY +FA G +I+ G G Sbjct: 1 MKHTSKLADIALLVGFAIVVALGPVIFTPIGAGYPDLLQKFAIYGIFAIGFNILFGLTGY 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LS +G+Y+ V + + + S +++G + +G SL+ G Y +I Sbjct: 61 LSFGHAAFLGVGSYAAVWSFKLLSMDLLPAVAFSVILAGLLALAIGFISLRRSGIYFSIL 120 Query: 126 TLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL +++ N+ PITNG+ G+ V V + I + Sbjct: 121 TLAFAQMCYNMAYSVLTPITNGETGLRVLRNDPRHLDAVFGYVSPTPSLLGLPITGWTGF 180 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y+ + + + + + R+ R I+ NQ + LSAF +S F G+ Sbjct: 181 YICGVVLVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYSTRPYLLSAFVISGMFAGL 240 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA AA+ + +++ + V+ + ILGG +L T ++ + N Sbjct: 241 AGALLAATDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVLGTGLIKYFENIFSAYNEQ 300 Query: 305 YFNSLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340 N++ F + + V++ ++ Sbjct: 301 QLNAVFSFVPDGAREWVVSTLSLFVGEGWQLTLGLLFMAVVIFLPGGIM 349 >gi|166030763|ref|ZP_02233592.1| hypothetical protein DORFOR_00437 [Dorea formicigenerans ATCC 27755] gi|166029345|gb|EDR48102.1| hypothetical protein DORFOR_00437 [Dorea formicigenerans ATCC 27755] Length = 358 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 24/337 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + K + I L+ +V ++ + + + + + I Y++ A L++VVG LG L Sbjct: 10 KTTKNNMITYLMVIVVYAVIQVLVTSGSLSSLFTGLLVPICTYIILAISLNLVVGFLGEL 69 Query: 67 SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL IGA++ + + + A+ +G G+++G+P L+ G Sbjct: 70 SLGHAGFMCIGAFTSAFFSKCMKGVIEPDLLRFMIALLIGAVCAGIFGILIGIPVLRLNG 129 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +N++ + + K + L I Sbjct: 130 DYLAIVTLAFGEIIKNVINVFYIGKDSKGFHFSMKDSVSLNMEPDGKILLNGPQGISGTP 189 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + + + + ++ I+L L + A IRD++ A S+ I KL AF++S+ Sbjct: 190 KDSTFTIGFILILITLVIVLNLISSRTGRAIMAIRDDRIAAESIGINITKYKLIAFSLSA 249 Query: 240 AFIGMAGAFFAASRDR--ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 A GMAG ++ + +P F ++ +I+++ V+LGG+ S+ A AIL + EL Sbjct: 250 AIAGMAGVLYSHNLSSLMATPQNFGYNMSIMILVFVVLGGIGSVRGSIIAAAILTLLPEL 309 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 G++ Y + I L +++L Sbjct: 310 LRGLSNY---------------RMLIYAIVLIVMMLF 331 >gi|254475842|ref|ZP_05089228.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria sp. R11] gi|214030085|gb|EEB70920.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria sp. R11] Length = 626 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 95/312 (30%), Gaps = 28/312 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ I + I Sbjct: 337 LDAISLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQFIPDHTLSIIVAI 396 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIA-TLIMSEIFQNILIKWKPITNGKAGIYVADR 155 P++ ++ A G+ M R Y TL+ + L + T G + Sbjct: 397 PMAFAVTFAMGVAMERLV--IRWLYSRPLETLLATFGISIALQQLAKNTFGTQARPLTAP 454 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + V + + + ++RT + R + Sbjct: 455 ---------GWLDGAWVLNDVVSISYIRIAIFVLAMIFLGLFLYIMKRTRLGLEMRAVTQ 505 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N + S+ + F + S G+AG S + V++ Sbjct: 506 NPRMAGSMGINPGRVNMLTFGLGSGIAGIAGVAIGLFAKVTS--DLGSDYIVQSFMTVVV 563 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ ++ + + M + + F + R Sbjct: 564 GGVGNIWGALAGAGMIGFLQKGIEWMTPSNTLAAQTYMIIFIIIFI-----------QFR 612 Query: 336 SHSLLRLRTPSN 347 ++ L+ + Sbjct: 613 PRGIIALKGRAA 624 >gi|110669182|ref|YP_658993.1| ABC-type branched-chain amino acid transport system, permease protein II [Haloquadratum walsbyi DSM 16790] gi|109626929|emb|CAJ53399.1| ABC-type branched-chain amino acid transport system, permease protein II [Haloquadratum walsbyi DSM 16790] Length = 319 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 126/318 (39%), Gaps = 30/318 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-------------YG 89 IY + A G+++ G GLL+ +AIGAY+ IL + + Sbjct: 13 ANIAGIYSILAIGMNMHWGDTGLLNFAHAGFFAIGAYTSAILTTPASDSGLLANRIIGFD 72 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 I + + + +++G G+++G S++ GDYLAI TL +EI + + +T+G+ Sbjct: 73 FPIVVGMITATVLAGVAGVLIGATSVRLDGDYLAIVTLAGAEILRLGISNEGWLTSGQQT 132 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + R S + Y + + ++L + +L ++ Sbjct: 133 LKNIPRP------------LEGALPSMLPYGFYYFLLVLAVLIACYLTFRYLAKSPFGRV 180 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 IR+++ +L + KL +F + +A G+AG+ +A + P MF V Sbjct: 181 LHAIREDEDVPKALGRNTMQFKLKSFGLGAAVAGLAGSLWAHFIFALQPTMFTPDLTFSV 240 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + VI+GG S ++ + ++ + S + ++ L Sbjct: 241 WAAVIIGGAGSYLGAITGMTVITLIRQVTRFI-----PSDVPLGSKLPYIRLIIIGALLV 295 Query: 330 LVILMRSHSLLRLRTPSN 347 L++ R LL + + Sbjct: 296 LILYYRPEGLLGNKERAL 313 >gi|256789735|ref|ZP_05528166.1| branched-chain amino acid ABC transport permease [Streptomyces lividans TK24] gi|289773624|ref|ZP_06533002.1| branched-chain amino acid ABC transport permease [Streptomyces lividans TK24] gi|289703823|gb|EFD71252.1| branched-chain amino acid ABC transport permease [Streptomyces lividans TK24] Length = 398 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 118/314 (37%), Gaps = 7/314 (2%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + +G+ + + A GL ++ G+ G LSL A+GAY YV L G Sbjct: 25 PFYLDAFWLRIGLFSMAAAIGAVGLGLLSGTAGQLSLGHAFFLAVGAYGYVWLAGEPGPG 84 Query: 92 IWLLIPVSAMISGACGMIMGL--PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + + A + + +G YL +ATL + + ++L+ +T G G Sbjct: 85 LPPAVAAVLAVLLAGAAGGLFSPVAGRVKGIYLGVATLALVFLGHHVLLTADSVTGGFNG 144 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 L G T E ++Y+ L + ++ L R A Sbjct: 145 RS-VPPLELGGFTFAESDPGLTVLGVPFGAEERLWYLGLALFAVTWFTARGLLRGRPGRA 203 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 +RD++ A + + + +AF VSS + G+AG A S R+ PD F + ++ Sbjct: 204 LAAVRDSETAAAVMGVHVARYRSAAFVVSSMYAGLAGVLLALSFRRVVPDYFSLALSVDY 263 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDCSFNMRHTTLMV 325 ++++++GG+ S++ + + L L Sbjct: 264 LAMIVIGGLGSVAGATAGAVFVTALPLLMTRYADQLPLVATPGSGGGSIGPTEASRYLYG 323 Query: 326 IALFLVILMRSHSL 339 A+ +++L L Sbjct: 324 AAIVVILLYAPDGL 337 >gi|149191434|ref|ZP_01869684.1| branched-chain amino acid ABC transporter, permease protein [Vibrio shilonii AK1] gi|148834703|gb|EDL51690.1| branched-chain amino acid ABC transporter, permease protein [Vibrio shilonii AK1] Length = 541 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 99/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ GL+I G +G++++ IGAY+ ++ I L + +S + Sbjct: 256 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMIGAYTTYVMQQLMPNQIGLALILSIPM 315 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G+ + +L L + +L + + + + Sbjct: 316 AFIVSGLVGIAIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 369 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + Y++L + +++ L++T + R + N+ + Sbjct: 370 TPDWMSGALQVNPMLSLTYNRLYIILFCIMVFIGLVMVLKKTPLGLQVRAVSQNRAMARA 429 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + S G+AG + + + I +V+ GG+ +L Sbjct: 430 MGIRSERVDALTFGLGSGVAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 487 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L ++ L+++ + L I R L Sbjct: 488 GTLVAGLSLGLFNKILEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 534 Query: 343 RTPSNF 348 R + Sbjct: 535 RGRAAE 540 >gi|114762282|ref|ZP_01441740.1| high-affinity branched-chain amino acid transport system permease protein livh / high-affinity branched-chain amino acid [Pelagibaca bermudensis HTCC2601] gi|114544900|gb|EAU47904.1| high-affinity branched-chain amino acid transport system permease protein livh / high-affinity branched-chain amino acid [Roseovarius sp. HTCC2601] Length = 599 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 127/328 (38%), Gaps = 26/328 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L+AV L + + +++ + I I ++ + +IV G G LSL I Y Sbjct: 20 LGLIAVAVLLAGLIAVPVAVGDEFVYHIFITICLFAALSTAWNIVGGYAGQLSLGHAIFY 79 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y+ ++ G+S W + A ++ +++ P + G + A+AT+ E+F+ Sbjct: 80 GIGGYA-GVILVNLGISPWFGMFAGAAVAVVAAIVVSWPCFRLHGPFFALATIAFLEVFR 138 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + ++ +T G G+ + + + R + + GM + Sbjct: 139 VLALHFRELTGGATGLMIQLNIGWEWMVFRER--------------LPALLIAFGMLLVC 184 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ +R + R+ + A + + +L A ++S+A M G F A Sbjct: 185 LAVAWAIRSHRLGFYLVATRERESAAKAAGVGTVKVRLMAVSISAALSAMVGTFHAMYLT 244 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I P+ MF +I + ++GG+ ++ +L+ + E G L F Sbjct: 245 FIEPESMFSLQFSIQIAMFALIGGIGTVWGPLLGAVLLVPITEFARGALGSEAIGLHGFV 304 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + + ++ Sbjct: 305 YGVVLMLVVLFL----------PNGIMG 322 >gi|118580095|ref|YP_901345.1| inner-membrane translocator [Pelobacter propionicus DSM 2379] gi|118502805|gb|ABK99287.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Pelobacter propionicus DSM 2379] Length = 319 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 29/304 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y+ ++ + + I M A L++++G G +SL + +GAY IL + YG++ WL++P Sbjct: 26 YLLNVLLFVGINTMLAVALNLLLGYAGQISLGHAGFFGLGAYLSGILTATYGMNPWLVMP 85 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++A++ G +G P LK +G LA+ATL + I + + T G +G L Sbjct: 86 LAALVVGILAWAIGFPVLKLKGHNLAMATLGLGIIIYIVFNETVDYTGGPSGFSGIPSLS 145 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 G S ++ YY++ L + L + I A R + D++ Sbjct: 146 LGGIVFDSDLK--------------SYYLIWCFALLVILFSVNLANSRIGRALRAVHDSE 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A + + K+ F +S+ +AG+ +A + +SP F F+ +I ++++V++GG Sbjct: 192 VAARVMGVNALLLKVQVFTLSAVICSLAGSLYAHTVTFVSPASFGFNFSIELLTMVVIGG 251 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ A+L + E + Y + L L+++ Sbjct: 252 LGSIYGSFLGAALLTLLPEFLRAAHDY---------------DIIIYGALLMLMVMFMPG 296 Query: 338 SLLR 341 L+R Sbjct: 297 GLVR 300 >gi|296188266|ref|ZP_06856658.1| amino acid or sugar ABC transport system, permease protein [Clostridium carboxidivorans P7] gi|296047392|gb|EFG86834.1| amino acid or sugar ABC transport system, permease protein [Clostridium carboxidivorans P7] Length = 300 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 79/309 (25%), Positives = 140/309 (45%), Gaps = 31/309 (10%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y ++ + IYV+ GL++ G G +SL YAIGAY+ IL ++G SIW Sbjct: 3 IFNSYFINILVVAGIYVILTLGLNLTTGFAGQVSLGHAAFYAIGAYTAAILSVKFGCSIW 62 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +P+SA+++ G I+GLPSL+ + D+LA+ T+ + I Q++++ IT G GI Sbjct: 63 ITLPISALVTWIIGAILGLPSLRVKEDFLAVVTMGLGLIIQSLMLNL-KITGGPMGIGNI 121 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + LG + + L + + + + + A I Sbjct: 122 KPVSILGHNFSMFN---------------FFILELVIIVILTFTMNRMVNSRFGRALIAI 166 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+++ +L K+ AFA+ + + G+AG FA +SPD F F+E+ I++S+V Sbjct: 167 REDETVADTLGINTTKYKVLAFAIGAMYAGIAGTLFAHYFTYVSPDSFGFTESSIILSMV 226 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++GG+ S+ IL EL G+ Y + + + +++ Sbjct: 227 VIGGLGSIKGSIIGAVILSIAPELLRGLKDY---------------RILIYGLLMVIMMR 271 Query: 334 MRSHSLLRL 342 R L Sbjct: 272 YRPQGLFGE 280 >gi|269928796|ref|YP_003321117.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] gi|269788153|gb|ACZ40295.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] Length = 365 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 68/307 (22%), Positives = 135/307 (43%), Gaps = 16/307 (5%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 ++ I +L+Y A +I+ G G +SL + IGAY+ +L SR+ ++ WL + Sbjct: 39 LNIAILVLVYAALAQAWNILGGFAGQISLGNAAFFGIGAYTSTVLLSRWEVTPWLGMLAG 98 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 A+++ +I+G P + G Y AIAT+ ++EI + W+ + + R Sbjct: 99 ALVAAIFAVIIGYPVFRLGGHYFAIATIALAEIVLTVFNDWEWVGGATGMLIPFAR---- 154 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + F + + +Y+ L + L + + + R+ + R I+++Q A Sbjct: 155 -DIETGRPTNSLYYLQFNLGKAPYFYIALALVVLVTVVTVIIDRSKLGYYLRAIKNDQDA 213 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENIIVISIVILGGM 278 +L ++ KL A A+S+AF + G F+A I P+ ++++ + ILGG+ Sbjct: 214 ARALGVHVLRYKLIAIAISAAFSAVVGTFYAQYLLYIDPETTMRLELSVLIALVAILGGV 273 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ A+LI EL + S N + + L+ + + + Sbjct: 274 GTVAGPLVGAAVLIPAAELTRQ----------QLGGSGNAIDLIMYGALIVLISIFQPNG 323 Query: 339 LLRLRTP 345 L+ L Sbjct: 324 LMGLVRR 330 >gi|21219233|ref|NP_625012.1| branched-chain amino acid ABC transport permease [Streptomyces coelicolor A3(2)] gi|6752323|emb|CAB69679.1| putative branched-chain amino acid ABC transport permease [Streptomyces coelicolor A3(2)] Length = 398 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 64/314 (20%), Positives = 124/314 (39%), Gaps = 7/314 (2%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL- 90 + +G+ + + A GL ++ G+ G LSL A+GAY YV L G Sbjct: 25 PFYLDAFWLRIGLFSMAAAIGAVGLGLLSGTAGQLSLGHAFFLAVGAYGYVWLAGEPGPG 84 Query: 91 -SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + ++ +++GA G + + + +G YL +ATL + + ++L+ +T G G Sbjct: 85 LPPAVATVLAVLLAGAAGGLFSPVAGRVKGIYLGVATLALVFLGHHVLLTADSVTGGFNG 144 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 L G T E ++Y+ L + ++ L R A Sbjct: 145 RS-VPPLELGGFTFAESDPGLTVLGVPFGAEERLWYLGLALFAVTWFTARGLLRGRPGRA 203 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 +RD++ A + + + +AF VSS + G+AG A S R+ PD F + ++ Sbjct: 204 LAAVRDSETAAAVMGVHVARYRSAAFVVSSMYAGLAGVLLALSFRRVVPDYFSLALSVDY 263 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDCSFNMRHTTLMV 325 ++++++GG+ S++ + + L L Sbjct: 264 LAMIVIGGLGSVAGATAGAVFVTALPLLMTRYADQLPLVATPGSGGGSIGPTEASRYLYG 323 Query: 326 IALFLVILMRSHSL 339 A+ +++L L Sbjct: 324 AAIVVILLYAPDGL 337 >gi|46579127|ref|YP_009935.1| branched-chain amino acid ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603295|ref|YP_967695.1| inner-membrane translocator [Desulfovibrio vulgaris DP4] gi|46448540|gb|AAS95194.1| branched-chain amino acid ABC transporter, permease protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563524|gb|ABM29268.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Desulfovibrio vulgaris DP4] gi|311232968|gb|ADP85822.1| inner-membrane translocator [Desulfovibrio vulgaris RCH1] Length = 317 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 31/321 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L + + + Y + + I +Y + A L++++G GL + YA+GAY+ Sbjct: 9 AGLAVLIAVLPLFLDPYWTDVCVSIGLYAVLALSLNLILGQAGLFHMGHAAFYAVGAYTA 68 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN-ILIKW 140 IL + Y + + +PV+ +++ +++ P + RGDYL I T+ + EI + ++ Sbjct: 69 AILNTVYHVPVLWTMPVAGLLAALFALVVARPIIHLRGDYLLIVTIGIVEIVRIALINNV 128 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 IT G GI+ R G + I YY++ +S + Sbjct: 129 FGITGGANGIFGISRPMLFGYKISK--------------PIQFYYLIWTWVAISILLFRR 174 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + A I+++ A + KL+AF + + + GM G F+AA ISP+ Sbjct: 175 LECSRFGRALNYIKEDDVAAEGSGVDTAYYKLAAFVLGALWAGMTGTFYAAKMTIISPES 234 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F E++++ +IVILGG S + +LIG+ EL F Sbjct: 235 FSFWESVVLFAIVILGG-GSNRGVLLGAFLLIGLPELFR---------------DFASAR 278 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + +A+ ++++ R +L Sbjct: 279 MLIFGLAMVVMMIFRPQGMLP 299 >gi|289577846|ref|YP_003476473.1| inner-membrane translocator [Thermoanaerobacter italicus Ab9] gi|289527559|gb|ADD01911.1| inner-membrane translocator [Thermoanaerobacter italicus Ab9] Length = 322 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 129/316 (40%), Gaps = 41/316 (12%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 ++ I I I ++ A L++VVG G S+ A+GAY+ I+ + + Sbjct: 32 IISPFVMLNLITIAINIILAVSLNLVVGFTGQFSIGHAGFMALGAYASAIMSLNFNVPFI 91 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + V A+++G G+I+G+P+L+ RGDYLAIATL ++EI + ++ + G G+ Sbjct: 92 VSLLVGAIVAGIGGIIIGIPTLRLRGDYLAIATLGLAEIIRGVITNIDYL-GGAYGLMGI 150 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + G ++ +I +++ A ++ Sbjct: 151 PQKTN-------------------------WLWAFGCMLVTVLVIKNFVQSSHGRACVSV 185 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+N+ A ++ K+ AF + S F G+ GA A I P+ F F ++ ++ +V Sbjct: 186 RENEIASEAMGINTTKYKVIAFTMGSFFAGIGGALLAHYITFIEPNAFNFLKSFDILVMV 245 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG SL+ A +L + + V+L Sbjct: 246 VLGGQGSLTGSVVAAIVLTLISTFLQSLAELRLIIYAIILIL---------------VML 290 Query: 334 MRSHSLLRLRTPSNFL 349 R LL S L Sbjct: 291 FRPQGLLGTHELSFKL 306 >gi|320450125|ref|YP_004202221.1| branched-chain amino acid transport system permease LivM/branched-chain amino acid transport ATP-binding protein livG [Thermus scotoductus SA-01] gi|320150294|gb|ADW21672.1| branched-chain amino acid transport system permease protein LivM/branched-chain amino acid transport ATP-binding protein livG [Thermus scotoductus SA-01] Length = 584 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 115/309 (37%), Gaps = 21/309 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y ++ + M A L ++ G G+ S +GAY+ +L + GLS WL + Sbjct: 19 PYYLTLLNFFALSAMVALSLYVLTGLAGMTSFAQAAFMGMGAYATALLTVKAGLSPWLGL 78 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + +++G +++ +G +L ++T+ + +T G G+ + Sbjct: 79 GAGLLSALLLALLLGALTVRLKGHFLPLSTIAWQVALYILAGNLVGLTGGHTGLTDLPPI 138 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + G ++ + R+ ++ + Y LR++ I A +R + Sbjct: 139 HLFGISLDTGFRYAFLTLFLLVLLVLALY--------------NLRQSRIGRALLALRGD 184 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 A S +L AF +S G+AG +A ++P F +I + + + G Sbjct: 185 ALAAASFGVDPAALRLKAFLLSGVIAGLAGFLYAHFLRFVNPTPFSLEASIKYLVMAVAG 244 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ + A G+ + + T + L L++++ Sbjct: 245 GVGSIPGVMLGAAFFTGLEDWLKDLLPLLLG-------QQGNYETIGYGLILALILILAP 297 Query: 337 HSLLRLRTP 345 L + Sbjct: 298 KGLWPMVER 306 >gi|55379129|ref|YP_136979.1| branched-chain amino acid ABC transporter permease [Haloarcula marismortui ATCC 43049] gi|55231854|gb|AAV47273.1| branched-chain amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 369 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 122/324 (37%), Gaps = 19/324 (5%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y+ + +Y++ + GL++ G G+++ + + +GAY +L + Sbjct: 34 GFLAPAYLLYLIGLSAMYMLLSMGLNVQWGYGGMINFSVAAFFGLGAYGTALLTASGSPI 93 Query: 92 -----IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + + ++ +I+G P+LK R DYLAIA+L ++E+ + ++ T G Sbjct: 94 SGGVSPVIALFGGLGLAAVLAVIIGYPTLKLRDDYLAIASLGLAEVVRIFILNESQWTAG 153 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSF---------VIYEIFMYYVLLGMCFLSASI 197 AG+ + + L + F V+ + ++ + Sbjct: 154 SAGLTGIPLFFSDWPVLGDLTYPYVFNVGGTPVFNMSQSVVTSLLNVVLVTVIVAAVYLF 213 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + ++ RTIR ++ +L K+ AF + S + +AG F++ +S Sbjct: 214 LRRIHQSPWGRVLRTIRTDEDLAETLGKNTFAFKMQAFVIGSLIMALAGVFYSHLVLFVS 273 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P + V VILGG S ++ + + + Sbjct: 274 PQDLQPITTFYVWVAVILGGTGSDRGAMLGGFTIVAIQQGTRFLT-----DTGALPIGAA 328 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 L+ + + ++ +R +L Sbjct: 329 PLRLMLVGLLIIFIVRLRPEGILP 352 >gi|329904369|ref|ZP_08273775.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480] gi|327548015|gb|EGF32753.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480] Length = 349 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 72/338 (21%), Positives = 134/338 (39%), Gaps = 25/338 (7%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 L + + ++ L++ +F+ ++ I IL+ +IV G G Sbjct: 14 PQSLPRKTAGIGYALMLALLVIAVFVPQFVDSPSHQNIAILILMAAQMGVAWNIVGGYAG 73 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +SL Y IGAY+ +L +++GL+ WL + +++ +++G + + Y A+ Sbjct: 74 QVSLGQAAFYGIGAYTSTLLFAQFGLNPWLAMIAGGVVAALISIVIGWSCFRLKSPYFAM 133 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 AT+ ++EI Q I W+ DR + ++ Y Sbjct: 134 ATIAVAEIIQIIFTNWEFAGGAVGLTIPMDR--------------QGWDVFVFASKVPYY 179 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y+ LG+ L+ L + R+ +R I+D A SL + KL AFAVSS F + Sbjct: 180 YIALGLLVLTLLANLMIERSYFGYYFRAIKDEPDAARSLGVNLRKYKLIAFAVSSFFTAL 239 Query: 245 AGAFFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 G+F+A I P +I + + ILGG+ +L IL + E + Sbjct: 240 GGSFYAQKELYIDPASVLGTGLSIKMALVSILGGIGTLFGPVLGAGILTLIDEGTRAL-- 297 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F + + + +V + + ++ Sbjct: 298 --------FGGTGRGTDLIIYAALIIVVAVYYPNGVIG 327 >gi|170690612|ref|ZP_02881779.1| ABC transporter related [Burkholderia graminis C4D1M] gi|170145047|gb|EDT13208.1| ABC transporter related [Burkholderia graminis C4D1M] Length = 619 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 106/334 (31%), Gaps = 29/334 (8%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + L + +L + G Y+ ++ IQ + + A + I+ G G L+ Sbjct: 24 TQQKSLRGLAMIGVLGILLIAAGPFLFGSYLLNVLIQAFFFSIVAVTVDILWGYTGYLTF 83 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + +GAY+ ++ + G S ++ A + L + Sbjct: 84 GQSAFFGLGAYAAGLVFTHGGFSTAYVLLALAATLAVTAGVAALLGWLSFYRGASPFFAT 143 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + + I++ ++ G+ +F + Y++ Sbjct: 144 VMSLVLPIVLSQLLLSGGE---------------WTGSSSGLTGYQTFDLSLEAWYWIAG 188 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + R+ IRDN+ L K+ ++A G+AG Sbjct: 189 AALAVVVGLAWVFVRSDGGRVLAAIRDNESRCLYLGINTSLVKIGLLVATAAVAGLAGFG 248 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + + ++P++ F +I V LGG +L ++ G+ + Sbjct: 249 YGSFSGVVAPELTGFVLGTQLIIWVALGGRGTLWGPVIGALLINVGTSYLSGIMPF---- 304 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ A VI++ L+ L Sbjct: 305 ----------AWQLILGAAFVAVIVLLPQGLVPL 328 >gi|83591316|ref|YP_431325.1| inner-membrane translocator [Moorella thermoacetica ATCC 39073] gi|83574230|gb|ABC20782.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Moorella thermoacetica ATCC 39073] Length = 317 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 75/342 (21%), Positives = 139/342 (40%), Gaps = 41/342 (11%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R NK + I+ ++ L++ A + + + + I ++ A L+++VG G Sbjct: 1 MRFNKKNLIVLAGVILIYFLVYELQAAGVISAFQEINLMMLGINIILAVSLNLIVGFTGQ 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L+L A+GAY IL + + + + A + G+++GLP+L+ RGDYLAIA Sbjct: 61 LALGHAGFMAVGAYVSAILSTNFNQPFPVALLAGACAAAVAGIVIGLPTLRLRGDYLAIA 120 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL EI + I G AG+ +L Sbjct: 121 TLGFGEIIRGAANNINYI-GGAAGMIGIPQLTNWT------------------------- 154 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 L M L+ + + A IR+N+ A ++ + K+ AFA+ + F G+A Sbjct: 155 WLYAMMVLTILVTTNFINSTHGRACVAIRENEIAAETMGINTTYYKVLAFAMGAFFAGIA 214 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA +A I P F F + ++ +V+ GG+ S++ A A + V + Sbjct: 215 GALYAHYFYLIQPTTFTFFRSFDILVMVVFGGLGSITGSIIAAAGITFVNAALQDL---- 270 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + + L ++++ R L+ + + Sbjct: 271 -----------AVLRMVIYAVLLIIIMVFRPQGLMGNKEFTL 301 >gi|156937523|ref|YP_001435319.1| inner-membrane translocator [Ignicoccus hospitalis KIN4/I] gi|156566507|gb|ABU81912.1| inner-membrane translocator [Ignicoccus hospitalis KIN4/I] Length = 342 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 133/314 (42%), Gaps = 20/314 (6%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + S Y + I Y + A L++ G GL + V A+GAY+ +L S + L Sbjct: 20 FSVSPSYAIDVIFFIAFYAIAALSLNLEYGYTGLNNFGQVAFIAVGAYTAGVLSSAFHLP 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAG 149 + +A+ G G + +P++K R DYL +AT+I+ E+ + +L + + G G Sbjct: 80 FVYCLLAAALAGGLLGAFVAVPTVKLREDYLGMATIIIGEMIRILLRNTPTESVWGGVFG 139 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + ++ + + + L + L+ ++ + + Sbjct: 140 LRGINPVFAYIK-------------DPLARQGAFVLLTLSLLALTYWLVDKWGNSPLGRV 186 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 ++IRD++ A S+ KL V SA G+AGA +A ++PD+F ++ Sbjct: 187 LKSIRDDELASKSVGKFTYRYKLITMFVGSALAGVAGALYAFYFLYLNPDVFMPLITFMI 246 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +VI+GG+ + + +AI+I + L Y + N ++ I + Sbjct: 247 WIMVIMGGVANNYGVVVGSAIVILINRLTQIAKDY-----INLPIEPNYFQAMMVGILII 301 Query: 330 LVILMRSHSLLRLR 343 + ++ R L+ + Sbjct: 302 VFLMFRPQGLVVEK 315 >gi|111021742|ref|YP_704714.1| ABC sugar transporter, ATP-binding component [Rhodococcus jostii RHA1] gi|110821272|gb|ABG96556.1| ABC sugar transporter, ATP-binding component [Rhodococcus jostii RHA1] Length = 854 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 66/332 (19%), Positives = 119/332 (35%), Gaps = 30/332 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y L +L + L A Y +Y + +S++ G G+ S+ Sbjct: 19 YSAAQLLGGPAAAILTIMVLSAGLVPGYQIYTVGLAAVYGLIVLSISLLAGWTGIWSIGH 78 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 A+GAY S + + + + G +G +F Y+A+ TL + Sbjct: 79 PAMVAVGAYVTAYGSSSGWGLAFTSVV-AVALCAMLGGFLGFAGSRFSVLYVALLTLAFT 137 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + I+ WK +T G G+ V LG V S + Y+ +G+ Sbjct: 138 LVTLEIIGAWKSVTGGDQGVPVDAFDTTLGELVPSSD--------------AVTYLAVGV 183 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L+ ++ ++LRRT I + + A S+ FA+S+ G++G A Sbjct: 184 LGLAVAVSVFLRRTTIRMRMVAAKTHPLAGRSIGIAPELQSSLGFAISAGVAGLSGVLLA 243 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 ISP+ F + +I+ +LGG S+ A L L + Sbjct: 244 LLSGFISPEGFSMVFAVNLIAATVLGGTGSVIGAVLGGAFLASAPTLASSL--------- 294 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ L+ L L +L + ++ Sbjct: 295 ------SIDQPYLIGGVLILTLLFLADGIVPT 320 >gi|332142257|ref|YP_004427995.1| Branched-chain amino acid ABC-type transport system, permease component [Alteromonas macleodii str. 'Deep ecotype'] gi|327552279|gb|AEA98997.1| Branched-chain amino acid ABC-type transport system, permease component [Alteromonas macleodii str. 'Deep ecotype'] Length = 556 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 100/296 (33%), Gaps = 21/296 (7%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ + I + ++ + +G Sbjct: 281 AAIGLAITFGVMGVINMAHGEMIMLGAYTTYVIQITFPSLIEYSLLMAIPAAFLVSGFVG 340 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + +L L + +L + + + + Sbjct: 341 VLIERGVIRFLKGRPL------ETLLATFGVSLILQQLVRTVFSPLNRQVQAPEWMTGSW 394 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + Y+++ + +++L L+++++ R + N+ +L+ + Sbjct: 395 VINPVFSLTYNRLYIIIFSLVVFFTLMLILKKSSLGLHVRAVSQNRDMARALSIKSDWVD 454 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 + F + S G+AG + + + I +V+ GG+ +L A L Sbjct: 455 AATFGLGSGIAGVAGVVLSQLTNV--GPNLGQAYIIDSFLVVVFGGVGNLWGTLVAAMSL 512 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + + + ++++ L L I R L + S Sbjct: 513 GTINKFLEPITGSVLAN-------------IIVLVGLVLFIQKRPKGLFPQKGRSA 555 >gi|298294033|ref|YP_003695972.1| ABC transporter [Starkeya novella DSM 506] gi|296930544|gb|ADH91353.1| ABC transporter related protein [Starkeya novella DSM 506] Length = 584 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 131/337 (38%), Gaps = 29/337 (8%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 R L ++ + +Q Y ++ +Q Y + G+ IV+G G Sbjct: 2 TRTASSTGRTALYGILALAAVVAVALFAPTQGYYLNIMMQAATYAIAVAGVVIVLGYCGQ 61 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L+L +GAY + YGL ++ + + +++ G+ +GL +L+ G YLA+ Sbjct: 62 LALCQAAFLGLGAYCVALGTVDYGLPFFVALALGVVVTSIGGIFLGLATLRLGGHYLAMV 121 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 T+ I +L W T G GI +R + Sbjct: 122 TIGFQMIVTMVLTNWISFTRGPDGISGVERPVLGPIDLSG--------------GSSYLA 167 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + L L+ + + A + +RDN+ A + + K AF +S+A G+ Sbjct: 168 LCLAFLVGVTFYAAGLKASRLGRAMQAVRDNEIAASTCGINVFRTKTVAFGISAALGGLG 227 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G FA + ISPD F F+E+I+++++ +LGG+ S T +L+ + E + Sbjct: 228 GGLFAGAFSYISPDQFTFNESIVLLTMALLGGVQSPVGALLGTILLVLLPEWLRFLR--- 284 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + A+ +++ + L Sbjct: 285 ------------QAYLAVYGAAVIAIMIFLPRGVWGL 309 >gi|169831290|ref|YP_001717272.1| inner-membrane translocator [Candidatus Desulforudis audaxviator MP104C] gi|169638134|gb|ACA59640.1| inner-membrane translocator [Candidatus Desulforudis audaxviator MP104C] Length = 299 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 69/308 (22%), Positives = 122/308 (39%), Gaps = 41/308 (13%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + + I+++ A GL ++ G G LS +IGAY+ +L R L Sbjct: 8 FINPYYVQVLTLLGIFLIAALGLHLITGVTGQLSFGHAAFLSIGAYTAALLNLRLDLPFL 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + A + G+++G PS++ GDYL IATL +EI + + + + IT G G+ Sbjct: 68 ACLLAGACAAALAGVLVGFPSMRLTGDYLGIATLGFAEIVRVVFMNLE-ITGGARGLAGI 126 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 R + + L+ + L + A I Sbjct: 127 PRETN-------------------------LVTVYVLVILTIWAMYRLNNSRFGRALVAI 161 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+++ A + ++ K+ AFA+ S G+AG +A ++P F F+ + ++ V Sbjct: 162 REDEIAAECMGIKSLWYKVGAFAIGSFCAGLAGGLYAHLLQYLNPSDFGFARSFEILCFV 221 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ S+ T IL E+ Y + I + L+++ Sbjct: 222 VLGGLGSIPGAVLGTTILTIAPEMLRFSAEY---------------RMMMYGILMVLMMI 266 Query: 334 MRSHSLLR 341 R LL Sbjct: 267 FRPSGLLG 274 >gi|220920345|ref|YP_002495646.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219944951|gb|ACL55343.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 357 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 71/325 (21%), Positives = 134/325 (41%), Gaps = 19/325 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ L L L +Y S+ IQI + + A GL+I+VG G +S+ + GA+ Sbjct: 31 AVWAGLALLCLAPLILDRYWLSLLIQIGYFAVAALGLNILVGFTGQISIGHAAFFGFGAF 90 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L + + ++ IP+S +++ A G++ GLP+ + +G YLAIATL I Q+ + Sbjct: 91 ASAWLSNNLAIPVFFAIPLSGIVTTAVGLVFGLPAARLKGLYLAIATLAAQYILQDFFAR 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G AG +YV+L L+ + Sbjct: 151 ANWFTGGVAGTPAEAFSILGFAFDTDQRY---------------FYVVLAYLVLTFVLAS 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + A +RD+ + + + + +F +S+ F G+ GA +A +S + Sbjct: 196 NLMHSRDGRALVAVRDHYLSAEMMGINLTRYRTLSFGLSAFFAGVGGALYAHYLQFVSVE 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDCS 315 F +I + ++I+GG+ S+ TA ++ V E + + L + Sbjct: 256 GFGILLSIQFLGMIIIGGLGSIMGTLMGTAFMVLVPEAMGWITDAVRGSALDRALALKDN 315 Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340 + + + + L ++ L Sbjct: 316 LSFLREMAIGLVIVLFLIFEPDGLA 340 >gi|307943925|ref|ZP_07659267.1| branched-chain amino acid ABC transporter, permease protein [Roseibium sp. TrichSKD4] gi|307772766|gb|EFO31985.1| branched-chain amino acid ABC transporter, permease protein [Roseibium sp. TrichSKD4] Length = 649 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 97/312 (31%), Gaps = 28/312 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLI 96 IY + A GL+I G +G++++ IGAY+ ++ Y SI + + Sbjct: 360 LDGLSLASIYFLAAIGLAITFGVMGVINMAHGEFIMIGAYTGYVVQQVIPDYTTSIIVAL 419 Query: 97 PVSAMISGACGMIMGL-PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 P++ +++ A G+ + R L L+ + L + G + Sbjct: 420 PLAFILAFAAGVALERSVIRHLRHRPLET--LLATFGVSIALQQLAKNIFGTQARPLTAP 477 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + + + +I L +T R + Sbjct: 478 A---------WLDGSWIINDIISISMIRIAIFALALAFLGLLIFILTKTRFGLEVRAVTQ 528 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N + S+ + F + S G+AG S + + V++ Sbjct: 529 NPRMASSMGINPERINMLTFGLGSGIAGIAGVAIGLFAKVTSE--LGSAYIVQSFMTVVV 586 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ ++ + + +N + + F + R Sbjct: 587 GGVGNIWGTLAGAGMIGSLQKFIEWLNPSNTLAAQTYMIIFIIIFI-----------QFR 635 Query: 336 SHSLLRLRTPSN 347 ++ L+ + Sbjct: 636 PKGIIALKGRAA 647 >gi|325264688|ref|ZP_08131417.1| high affinity branched-chain amino acid ABC transporter, permease protein [Clostridium sp. D5] gi|324029980|gb|EGB91266.1| high affinity branched-chain amino acid ABC transporter, permease protein [Clostridium sp. D5] Length = 357 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 146/334 (43%), Gaps = 23/334 (6%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 K + I + ++ +++ +F+ + + + + + YV+ A L++ VG LG LSL Sbjct: 9 TKNNLITYGMVIIAYIIVQIFVLSGSLSNLMQGLLVPLCTYVILALSLNLTVGVLGELSL 68 Query: 69 NCVIAYAIGAYSYVILGSRYGL------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 IGA++ +L I + A+++ G+++G+P L+ RGDYL Sbjct: 69 GHAGFMCIGAFTGAFFSKCTFGAIPDGLRFFLAILLGALVAAIFGILIGIPVLRLRGDYL 128 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI +N++ + + L + + Sbjct: 129 AIVTLAFGEIIKNVMNVLYVGKDSAGFHFSLKDQMSLNLADGGEVIIKGAQGISGTPKNS 188 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 + + + + ++ IIL L + A IRDN+ A S+ I KL AFAVS++ Sbjct: 189 TFTIGIILVLITLFIILNLMNSRDGRAVMAIRDNRIAAESIGINITKYKLMAFAVSASLA 248 Query: 243 GMAGAFFAASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AG +A + ++ P F ++ +I+++ V+LGG+ ++ A +L + E+ G Sbjct: 249 GVAGVLYAHNLATLTALPKNFGYNMSIMILVFVVLGGIGNMRGSIIAAVLLTLLPEVLRG 308 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +N Y + + L +++L Sbjct: 309 LNDY---------------RMLIYAVVLIVMMLF 327 >gi|253700889|ref|YP_003022078.1| inner-membrane translocator [Geobacter sp. M21] gi|251775739|gb|ACT18320.1| inner-membrane translocator [Geobacter sp. M21] Length = 297 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 130/315 (41%), Gaps = 38/315 (12%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 FL Y+ + + + I ++ A GL+++VG G LSL +IGA++ ++ Sbjct: 4 FLNSLVGTVDPYMMQILVNVGIAIVLALGLNVIVGLTGQLSLGHAAFMSIGAFTSAMVTI 63 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + GL L + V+ ++ +G P L+ GDYLAI TL +EI + + ++ Sbjct: 64 KTGLPFSLNLLVTGAVTAIVAAAIGFPILRLTGDYLAICTLGFAEIVKVFFLNFE----- 118 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + I M + + LS ++ +++ + Sbjct: 119 ------------------PTNKALGLTVPQAKTVIPMPIYVWVVVILSIVLVTFVQSSRF 160 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A + IR++ A ++ K+ AFA+ S G+ G +A I+P F F ++ Sbjct: 161 GRALKAIREDDIAAEAMGINTARYKIQAFALGSFMAGVGGGLYAHFLSYINPSDFGFLKS 220 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + ++++V+LGG+ S+ +++L E M+ Y + Sbjct: 221 VDILAMVVLGGLGSVPGTVIGSSVLASAPEFLRFMSQY---------------RMLVYGA 265 Query: 327 ALFLVILMRSHSLLR 341 L +++ R + LL Sbjct: 266 LLVFLMVFRPNGLLG 280 >gi|227499403|ref|ZP_03929514.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus tetradius ATCC 35098] gi|227218465|gb|EEI83708.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus tetradius ATCC 35098] Length = 325 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 84/340 (24%), Positives = 150/340 (44%), Gaps = 45/340 (13%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I LL + ++L + + + +Y +S+ I I I ++ A L++ VG LG ++L Sbjct: 9 YIITTLLVLALFIILEVLMNSGLISRYWESILILICINIIMATSLNLTVGVLGQVNLGHA 68 Query: 72 IAYAIGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I + L + + ++A++SG G+++GLP L+ RGDYLAI TL Sbjct: 69 GFMAIGAYTAGIFLKTGLASGPLGFVISLVLAALVSGFFGILIGLPILRLRGDYLAIVTL 128 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + I+ IT G G+ I + + Sbjct: 129 AFGEIIRVIIENM-NITGGAQGMAGIP-------------------------TIKSFAIF 162 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + L ++I + A +IRDN+ A + I K AF +S+ F G+AGA Sbjct: 163 FFVAVLIIALIFTYADSRHGRAVLSIRDNELAAEACGINITKYKTFAFTLSAVFAGIAGA 222 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A S I+ ++F ++++ + +V+LGG+ S++ ++ L + E+ + Sbjct: 223 LYAQSFGVIAANIFNYNKSFDYLVMVVLGGIGSITGAIISSVGLTILPEILRPLAE---- 278 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L LV++ R LL + S Sbjct: 279 -----------WRMVIYAVILILVMIFRPQGLLGRKEFSI 307 >gi|226306811|ref|YP_002766771.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226185928|dbj|BAH34032.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 332 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 124/315 (39%), Gaps = 6/315 (1%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + +G + Y + A GL++ G GLL+ + +G Y I+ Y +WL I Sbjct: 13 SFAQLIGPSAIFYALLAIGLNLHFGYAGLLNFGQIGFALLGGYGVGIMTVTYDQPLWLGI 72 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVAD 154 V +G +++G+P+L+ R DYLAI T+ SEI + I +T G++ Sbjct: 73 LVGLTAAGLLALVLGIPTLRLRADYLAIVTIAASEILRLIFRSTASDSVTGSTNGLFGFA 132 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + + S ++ F +++ V + + + L + + +R Sbjct: 133 DPFTALSPFDSAKQYSFLGVKFYGDDLWSMVVGWTLVLILCGFVYLLTHSPWGRVLKAVR 192 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 +++ A SL + K+ A + G+AG F A I+PD + ++ +I Sbjct: 193 EDEDAARSLGKNVFVYKMQALVLGGVIGGLAGVFNALQTKSINPDFYSTAQTFFAFGALI 252 Query: 275 LGGMTSLSKIAKATAILIGVV----ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 LGG ++ + ++ L L + L+ + + L Sbjct: 253 LGGAATVFGPVVGAMLFWFLLAIPDALLRQAISGENPLLSLTEQQVGATRYVLLGLMIAL 312 Query: 331 VILMRSHSLLRLRTP 345 +++ R +L + Sbjct: 313 LMVFRPQGILGNKRE 327 >gi|319937171|ref|ZP_08011578.1| hypothetical protein HMPREF9488_02413 [Coprobacillus sp. 29_1] gi|319807537|gb|EFW04130.1| hypothetical protein HMPREF9488_02413 [Coprobacillus sp. 29_1] Length = 315 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 127/291 (43%), Gaps = 26/291 (8%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + A++ + + + Y + I I ++ A L++ G LG L+L Sbjct: 11 ISFVCALLIYGGMMFAMSSGIINTYWSGILIVACINIVLATSLNLASGYLGQLTLGHAGF 70 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 ++GAY + + + + + A+++ G+I+G+P+L+ +GDYL I TL +EI Sbjct: 71 MSVGAYVSALCSIYMQVPFIVSLLIGALVAAVVGLIIGIPTLRLKGDYLCIITLAFNEII 130 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + I++ ITNG G+ + + Sbjct: 131 RVIMLN-IDITNGAKGLMGIPPSTDFT-------------------------AVFLSAVV 164 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + +I + ++ A +IR+++ A + K+ AF +S+ F G+AG +A Sbjct: 165 TIYVIYCIVKSRHGRAIISIREDETASELAGIPTSYYKILAFTISAFFAGLAGGLYAHYI 224 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 + P +F +++++ ++ +V+LGG+ +L A ++ + E + Y Sbjct: 225 TILIPKVFDYNKSVEILVMVVLGGLGNLKGSVIAAIVMTILPEYLRAFSEY 275 >gi|91976327|ref|YP_568986.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91682783|gb|ABE39085.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 328 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 126/313 (40%), Gaps = 24/313 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 Y+ ++ + L+Y + +I+ G G +SL + + +GAY+ +L +++G+ Sbjct: 27 PLFVKDVYVQNIMVLTLMYAALSQAWNILGGYCGQISLGHALYFGLGAYTTALLFTKFGV 86 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W + +IS M +G P+ + RG Y IAT++++EI + W Sbjct: 87 LPWFGMLGGGLISAVIAMALGYPTFRLRGHYFVIATIVIAEIGFLLFHNWDWAGAALGID 146 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + ++ YY L C ++ + WL + W Sbjct: 147 IPVRGDSWAKFQFTR-------------SKLPYYYFALVFCCVAWLVTWWLENSKWGYWW 193 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIV 269 R ++DN +A SL + +K+ A AVS+ + G+F+A I P+ F ++++ Sbjct: 194 RAVKDNPEAAESLGVVVFNSKMGAAAVSAFLTAIGGSFYAQFVSYIDPESVMTFQFSLLM 253 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +LGG+ +L AILI + EL + L + Sbjct: 254 ALPAVLGGIGTLWGPVLGAAILIPLTELTRSFIGGSGRGV----------DLILYGTVIV 303 Query: 330 LVILMRSHSLLRL 342 L+ L R L+ L Sbjct: 304 LISLARPEGLIGL 316 >gi|301057644|ref|ZP_07198722.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] gi|300448258|gb|EFK11945.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] Length = 331 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ ++ ++ S Y+ + ++Y++ A GL+IV G GLL L V Y IGA Sbjct: 12 AILIAAVILPWIPLGISTDYLLRVLTTAVLYMILALGLNIVPGFTGLLDLGYVGFYGIGA 71 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L Y LS+W+++P++A G+++G P+L+ GDY AI T SE+ ++ Sbjct: 72 YTSGLLAIHYDLSLWIILPLAAANGALWGILLGAPTLRLTGDYFAIVTFGFSELVVLLIR 131 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G G+ G + +F YY+ + + + ++ Sbjct: 132 NELWLTRGPMGLPGISPPAIFGYPLTRGWQF--------------YYLAIFLMLVVLVVV 177 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L + + AW IR+++ A +I K++AFA S+A M GAF+A I P Sbjct: 178 VRLENSRLGRAWFAIREDEIAAQCCGINLIRYKVTAFAASAAIGAMGGAFYAKWFRFIHP 237 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 DMFKF E+I+++ +++ GGM S+ ILI + E+ S Sbjct: 238 DMFKFWESILILCLIVFGGMGSIGGTMLGALILIPLTEILRS----------ALPQSMFN 287 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + + L +++ +R L+ Sbjct: 288 ARYLIYGLLLVIMMRLRPAGLIP 310 >gi|160896023|ref|YP_001561605.1| ABC transporter-like protein [Delftia acidovorans SPH-1] gi|160361607|gb|ABX33220.1| ABC transporter related [Delftia acidovorans SPH-1] Length = 630 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 111/336 (33%), Gaps = 34/336 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + + L + + I ++ M A GL ++ G G+ S IGA Sbjct: 24 VLTVAAIALLAASWGFLPDFTVVILSYIGLFAMVAAGLVMLTGVGGMTSFGQAAFVGIGA 83 Query: 79 YSYVILGSRYGLS------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 Y+ + + W+ + + +I+ ++G ++K +G YL + T Sbjct: 84 YATAWVCTAPASVAALGGLVGAAGLPWVGLALGLLITFVVAWLLGAVTVKLQGHYLPLCT 143 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + + + G+ GI L + M V Sbjct: 144 IAWGLSLYYLFGNMEFL-GGQTGITGIAPLV--------------IGGVSLASPRAMGVV 188 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++ ++ L + A R +R + S+ ++ F +++ ++G Sbjct: 189 IWAVLLVALWLLHNLLDSREGRAIRALRGGRVMAESMGIDTAHYRVKLFVLAALLATLSG 248 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A + +SP F + I + + ++GG L ++ V + + Sbjct: 249 WLYAHMQRFVSPAPFNLNVGIEYLFMAVVGGAGHLWGAVLGATLITLVKQKLQDILPALL 308 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + + LV+ + L Sbjct: 309 GTSGNF-------EVIVFGLLMVLVLQRFAEGLWPT 337 >gi|117164903|emb|CAJ88454.1| putative branched-chain amino acid ABC transport permease [Streptomyces ambofaciens ATCC 23877] Length = 383 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 65/314 (20%), Positives = 118/314 (37%), Gaps = 7/314 (2%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + +G+ + + A GLS++ G+ G LSL A+GAY YV L G Sbjct: 28 PFYLDAFWLRIGLFSMAAAIGAVGLSLLSGTAGQLSLGHAFFLAVGAYGYVWLAGEPGPG 87 Query: 92 IWLLIPVSAMISGACGMIMGL--PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + + A + + +G YL +ATL + + ++L+ +T G G Sbjct: 88 LPPAVAAVLAVLLAGAAGGLFSPVAGRVKGVYLGVATLALVFLGHHVLLTADSVTGGFNG 147 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 L G T E ++Y+ L + L+ L R A Sbjct: 148 RS-VPPLEIGGFTFAETDPELTVLGVPFGAEERLWYLGLALFALTWFTARGLLRGRPGRA 206 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 +RD++ A + + + SAF VSS + G+AG A S R+ PD F ++ Sbjct: 207 LVALRDSETAASVMGVHVARYRSSAFVVSSMYAGLAGVLLALSFRRVVPDYFSLLLSVDY 266 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDCSFNMRHTTLMV 325 ++++++GG+ S++ + + L L Sbjct: 267 LAMIVIGGLGSVAGATAGAVFVTALPLLMTRYADQLPLVATPGSGGGSIGPTEAARYLYG 326 Query: 326 IALFLVILMRSHSL 339 A+ +++L L Sbjct: 327 AAIVVILLYAPDGL 340 >gi|297624576|ref|YP_003706010.1| inner-membrane translocator [Truepera radiovictrix DSM 17093] gi|297165756|gb|ADI15467.1| inner-membrane translocator [Truepera radiovictrix DSM 17093] Length = 370 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 110/309 (35%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 A + + + LIY + GL+IV G G +S+ +GAY+ +L G Sbjct: 45 APFMTRSLFRLFDIALIYTVAVMGLNIVTGYAGQISIGQAAFMGVGAYTAAVLARDVGGP 104 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + A + +G G ++ + +L + ++ I + + + Sbjct: 105 VLGFESTIPFWFAALLLPLGGAVAAAVGAFVGLPSLRLKHLYLAIATLAFQVIFTWSVGH 164 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 V + F + F YY L + + A + L R+ A Sbjct: 165 TPWLNQGGSIRVPRVSFFGEEIRGSALIGPFYYYFALVVVIILAVAMRNLLRSKFGRALV 224 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RDN +A ++ K+ AFA++ + G+AGA A + + F +I ++ Sbjct: 225 AVRDNDRAADAMGIDPGRTKVMAFAIAGFYAGVAGALLALYDGSVIIESFTLGISINFLA 284 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 + I+GG+ ++ A L + + + T+ + + L Sbjct: 285 MAIVGGLGTMVGSLIGPAFLTFLDPWVESFAGFVGGFMPATIDVATAMRPTVFGLIIVLF 344 Query: 332 ILMRSHSLL 340 ++ L Sbjct: 345 LIFEPRGLA 353 >gi|84387635|ref|ZP_00990652.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Vibrio splendidus 12B01] gi|84377480|gb|EAP94346.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Vibrio splendidus 12B01] Length = 539 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 98/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ GL+I G +G++++ IGAY+ ++ I L + +S Sbjct: 254 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMIGAYTTYVMQLLMPNHIGLALILSIPA 313 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G+ + +L L + +L + + + + Sbjct: 314 AFIVSGLVGIVIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 367 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + Y++L + +++ L++T + R + N+ + Sbjct: 368 TPEWMSGALQLNPMLSLTYNRLYIILFCGLVFMGLLMVLKKTPLGLQVRAVSQNRGMARA 427 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + S G+AG + + + I +V+ GG+ +L Sbjct: 428 MGIRSERVDAMTFGLGSGVAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 485 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L ++ L+++ + L I R L Sbjct: 486 GTLVAGLSLGLFNKILEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 532 Query: 343 RTPSNF 348 R + Sbjct: 533 RGRAAE 538 >gi|84502917|ref|ZP_01001030.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] gi|84388900|gb|EAQ01770.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] Length = 652 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 98/304 (32%), Gaps = 28/304 (9%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLIPVSAMISG 104 IY + A GL+I G +G++++ +GAY+ ++ Y +SI + IPV+ ++ Sbjct: 371 IYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVIQQIIPNYTVSILVAIPVAFAVTF 430 Query: 105 ACGMIMGLPSLKFRGDYLAIA-TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 G+ M R Y TL+ + L + G + Sbjct: 431 GAGVAMERLV--IRWLYSRPLETLLATFGISIALQQIAKNVFGTQARPLTSP-------- 480 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 + + V + + A + +++T + R + N + S+ Sbjct: 481 -GWLDGAWIMNDVVSISYIRIAIFVLALVFLAVFLFIMKKTRLGLETRAVTQNPRMAASM 539 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + F + S G+AG S + V++GG+ ++ Sbjct: 540 GINPDRVNMLTFGLGSGIAGIAGVAIGLYAKVTSELGSDYIVQS--FMTVVVGGVGNIWG 597 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 ++ + + +N + + F + R ++ LR Sbjct: 598 TLLGATMIGFLQKGIEWLNPSNTLAAQTYMIVFIIIFIQF-----------RPRGIIALR 646 Query: 344 TPSN 347 + Sbjct: 647 GRAA 650 >gi|311103746|ref|YP_003976599.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310758435|gb|ADP13884.1| inner-membrane translocator 6 [Achromobacter xylosoxidans A8] Length = 332 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 140/325 (43%), Gaps = 30/325 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ + + L + + Y+ + ++++V+ A GL +V+G G +L+ Y +G Sbjct: 8 ALLALMAVVLAILPFAASGYVIYVVNLLMVFVVLALGLHLVIGETGQFALSHAAFYGVGI 67 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ ++ + + ++ I +++ A G ++G +L+ R YLA++T E Q + + Sbjct: 68 YTAGLINNLWHPPFFISIVAGGLLAAALGYVIGALALRMRDIYLALSTFAFGEAMQWVFL 127 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W+ +TNG G ++ F ++ + Y ++ + L Sbjct: 128 NWQSVTNGSNGFRISPATLFGYE---------------LVSDAKAYPFVVLIAALLLWAT 172 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L R+ + +A+R +R++ A ++ + K +AF +S+A+ G+AG + I P Sbjct: 173 VALSRSQLGSAFRAVRESDVAAQAMGVNVNAIKRTAFTLSAAYAGIAGGMYTTFASFIHP 232 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F I+++++V++GG+ S+ + EL + Sbjct: 233 ESLGFQTTILILTMVVVGGIGSVRGAIAGALAFGLISELLRQALSF-------------- 278 Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343 + + L ++ L R Sbjct: 279 -QEIIYGVILMGFMMFAPKGLFAGR 302 >gi|229492753|ref|ZP_04386554.1| ABC branched chain amino acid transporter, permease component [Rhodococcus erythropolis SK121] gi|229320412|gb|EEN86232.1| ABC branched chain amino acid transporter, permease component [Rhodococcus erythropolis SK121] Length = 329 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 124/315 (39%), Gaps = 6/315 (1%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + +G + Y + A GL++ G GLL+ + +G Y I+ Y +WL I Sbjct: 10 SFAQLIGPSAIFYALLAIGLNLHFGYAGLLNFGQIGFALLGGYGVGIMTVTYDQPLWLGI 69 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVAD 154 V +G +++G+P+L+ R DYLAI T+ SEI + I +T G++ Sbjct: 70 LVGLTAAGLLALVLGIPTLRLRADYLAIVTIAASEILRLIFRSTASDSVTGSTNGLFGFA 129 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + + S ++ F +++ V + + + L + + +R Sbjct: 130 DPFTALSPFDSAKQYSFLGVKFYGDDLWSMVVGWTLVLILCGFVYLLTHSPWGRVLKAVR 189 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 +++ A SL + K+ A + G+AG F A I+PD + ++ +I Sbjct: 190 EDEDAARSLGKNVFVYKMQALVLGGVIGGLAGVFNALQTKSINPDFYSTAQTFFAFGALI 249 Query: 275 LGGMTSLSKIAKATAILIGVV----ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 LGG ++ + ++ L L + L+ + + L Sbjct: 250 LGGAATVFGPVVGAMLFWFLLAIPDALLRQAISGENPLLSLTEQQVGATRYVLLGLMIAL 309 Query: 331 VILMRSHSLLRLRTP 345 +++ R +L + Sbjct: 310 LMVFRPQGILGNKRE 324 >gi|311696988|gb|ADP99861.1| inner-membrane translocator [marine bacterium HP15] Length = 347 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 79/322 (24%), Positives = 137/322 (42%), Gaps = 15/322 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL L + Y+ +G + I V+ GL+I+ G GL+SL +GA Sbjct: 24 LWLGFFLLILLVFPFVVDSYLLYLGCLVGIAVISTTGLNILTGFTGLISLGQAGFMGVGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ L L + + ++ +++ A G+++GLPSL+ +G YLAIATL S I Sbjct: 84 YTVAWLSINTALPFPVTLVLAGLMAAAVGILVGLPSLRVKGLYLAIATLAASVFLHFIFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W+ +T G G+ + F T + Y++++ + L Sbjct: 144 EWESVTGGMGGLSLEPAHLFGLTFQSDFMM---------------YFIIVPLAVLMVLAA 188 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + RT I A+ IRD + L ++ KL +FA+SS + G+AG FA ++P Sbjct: 189 RNVFRTRIGRAFIAIRDRDISAEILGINLLRYKLMSFALSSFYAGIAGGLFAYFYRVVTP 248 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F S +I ++ VI+GGM +L A + V E + + Sbjct: 249 ESFPLSMSIFYLAAVIVGGMGNLLGGILGAAFMTLVPEALKLLTAALTPFYPNAPVFMSP 308 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 + + ++ H L Sbjct: 309 MLEIIFGALIVGFLIFEPHGLA 330 >gi|315505567|ref|YP_004084454.1| inner-membrane translocator [Micromonospora sp. L5] gi|315412186|gb|ADU10303.1| inner-membrane translocator [Micromonospora sp. L5] Length = 381 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 139/342 (40%), Gaps = 19/342 (5%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + +L LAV + L + Y + ++ ++ G +++VG G L Sbjct: 27 REARGSTLLRHLAVAVFAGTLVVLVTNQLAPYQNLQVARVCAFLCVTAGHTVLVGLNGQL 86 Query: 67 SLNCVIAYAIGAYSYVI-------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL A GAY+ + R ++ + V+ ++ G+++GL + + RG Sbjct: 87 SLGHGALMATGAYTVALTQQALDERAVRGWWTLPASLLVAVAVTALGGLVVGLAAARLRG 146 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 YLA TL ++ + + + + NG+ G+ + ++ Sbjct: 147 PYLAGVTLAVATLVPAVTTIFTGVFNGEQGLRFPAQTPPAAL------------GAYFQP 194 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 E ++ ++ LG L+ ++ L R+ + R +RD++ A + ++ AF VS+ Sbjct: 195 ERWLAWIALGAALLTMLLLANLVRSRFGRSLRAVRDDEVAARLAGIPVARTQVLAFVVSA 254 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A G+ G +A ++P F ++ ++ +++GG+ SL+ +L+ + +L Sbjct: 255 ACAGLGGGVYAMLTATVAPGKFPLDLSLFLLMAIVIGGLGSLAGAVWGAVLLVALQDLPG 314 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + S + + L +V+L L Sbjct: 315 LLTEHLNLSAGLAQRLEGNLALAVFGLILIVVMLAAPGGLQG 356 >gi|222086815|ref|YP_002545349.1| urea or short-chain amide ABC transporter [Agrobacterium radiobacter K84] gi|221724263|gb|ACM27419.1| urea or short-chain amide ABC transporter [Agrobacterium radiobacter K84] Length = 541 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 98/297 (32%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAYS ++ S S L S I+ ++ Sbjct: 262 AAIGLAITFGVMGIINMAHGEMVMLGAYSTFMVQSVIRTSYPELFDWSLAIALPVAFVVT 321 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + S Sbjct: 322 GAVGLVIER--GVIRFLYGRPLETLLATWGISLILQQAVRSIFGPTNQEVGNPSW-MSGS 378 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F ++ + ++++ + +++L L+R+A R + N++ S+ + Sbjct: 379 FDIGYLSFTWNRLWIIVFSLGVFVALLLLLKRSAFGLQMRAVTQNRRMASSMGIRTPWVD 438 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S GMAG A S+ S I +V+ GG+ +L L Sbjct: 439 AFTFALGSGIAGMAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 496 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L+++ + L I R L L+ + Sbjct: 497 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 540 >gi|39996831|ref|NP_952782.1| branched-chain amino acid ABC transporter permease [Geobacter sulfurreducens PCA] gi|39983719|gb|AAR35109.1| branched-chain amino acid ABC transporter, permease protein [Geobacter sulfurreducens PCA] gi|298505846|gb|ADI84569.1| branched-chain amino acid ABC transporter, membrane protein [Geobacter sulfurreducens KN400] Length = 326 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 139/317 (43%), Gaps = 29/317 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 LL L L ++ Y+ ++ + + I+ M A L++++G G +SL + +GAY+ IL Sbjct: 19 LLILALPTFIAEGYLLNVFVFVGIHTMLAVALNLLLGYAGQISLGQAAFFGLGAYASGIL 78 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + + + WL + V A G +G P LK +G YLA+ATL I + + +T Sbjct: 79 TATHEWNPWLAMVVVAAAVGTLAFAIGFPILKLKGHYLAMATLGFGIIVYILFNEAVELT 138 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G +G L T S ++ YY++ G+ ++ + + L + Sbjct: 139 GGPSGFPGIPNLAVGSVTFDSDLKN--------------YYLIWGIALVTILLSVNLVNS 184 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 I R I D++ A + + K+ FA+S+ +AG+ +A + +SP F F+ Sbjct: 185 RIGRGLRAIHDSEVAARVMGVNVRLLKVQVFALSAVISSVAGSLYAHTMTFVSPTSFGFN 244 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 ++ ++++VI+GG+ S+ +L + EL Y + Sbjct: 245 FSVELVTMVIIGGLGSIYGSFLGATLLTLLPELLRAFQDY---------------DIVVY 289 Query: 325 VIALFLVILMRSHSLLR 341 + L + + L+R Sbjct: 290 GLLLIFMTMFMPGGLVR 306 >gi|134299578|ref|YP_001113074.1| inner-membrane translocator [Desulfotomaculum reducens MI-1] gi|134052278|gb|ABO50249.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Desulfotomaculum reducens MI-1] Length = 300 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 70/322 (21%), Positives = 138/322 (42%), Gaps = 41/322 (12%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + Y + + IY++ A GL+++ G G LS +IGAY+ I + G Sbjct: 4 IFSMFLNDYYIQVLTMLGIYLIGALGLNLITGVTGQLSFGHAAFLSIGAYTSAIFSVKLG 63 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 +S + I ++SG G+++G P+L+ GDYL IATL EI + + + IT G G Sbjct: 64 MSFPVAIIAGGLMSGFWGILLGYPTLRLTGDYLGIATLGFGEIVRVVFLNL-SITGGALG 122 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + R L ++ + ++ ++ L + + Sbjct: 123 MAGIPRSSSLTV-------------------------VILVVIVTVWAMVRLENSRFGRS 157 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 IR+++ A ++ I +K++AFA+ + G++G +A ++P F F ++ Sbjct: 158 LLAIREDEIAAEAMGVNITTSKITAFAIGTFIAGVSGGLYAHLLTYLNPSDFGFLKSFEF 217 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++ V+LGG+ S+ + T+IL E + Y + + + Sbjct: 218 LTFVVLGGLGSIPGVILGTSILTLAPEFLRFIADY---------------RMMVYGLLMV 262 Query: 330 LVILMRSHSLLRLRTPSNFLER 351 +++++R LL S L + Sbjct: 263 VMMIVRPRGLLGGVKVSRILNK 284 >gi|303327668|ref|ZP_07358108.1| high-affinity branched-chain amino acid transport protein [Desulfovibrio sp. 3_1_syn3] gi|302862029|gb|EFL84963.1| high-affinity branched-chain amino acid transport protein [Desulfovibrio sp. 3_1_syn3] Length = 343 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 139/323 (43%), Gaps = 31/323 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + L Y + + I +Y + A L++++G G+ + YA+GAY Sbjct: 6 LYILMGALLCGLPLVCNPYWLDVCVMIGLYALLALSLNVILGQAGIFHMGHAAFYAVGAY 65 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 IL + I+ +P++ + +++ P + RGDYL I T+ + EI + LI Sbjct: 66 VTAILNTLCHWPIFWTMPLAGAAAALFALLVARPIIHLRGDYLLIVTIGIVEIVRIALIN 125 Query: 140 -WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G GI+ R F G ++ + YY++ GM +S + Sbjct: 126 DVFGLTGGSNGIFGISRPRFFGYK--------------IVKSVQFYYLVWGMVGVSLLLF 171 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ A I+++ A + KL AF + + + GMAG +AA I+P Sbjct: 172 YGLWRSRFGRALNYIKEDDVAAEGCGVNVTRYKLLAFVLGAFWAGMAGTVYAAKMVTIAP 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F F E++I+ ++VIL G S + + + IG+ E+ F+ Sbjct: 232 ESFNFMESVIIFAVVILSG-GSQLGVLVSAFLFIGLPEVLR---------------EFSA 275 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + +A+ ++++ R LL Sbjct: 276 ARMLIFGLAMMVMMIWRPQGLLP 298 >gi|302868036|ref|YP_003836673.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029] gi|302570895|gb|ADL47097.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029] Length = 381 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 139/342 (40%), Gaps = 19/342 (5%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + +L LAV + L + Y + ++ ++ G +++VG G L Sbjct: 27 REARGSTLLRHLAVAVFAGTLVVLVTNQLAPYQNLQVARVCAFLCVTAGHTVLVGLNGQL 86 Query: 67 SLNCVIAYAIGAYSYVI-------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL A GAY+ + R ++ + V+ ++ G+++GL + + RG Sbjct: 87 SLGHGALMATGAYTVALTQQALDERAVRGWWTLPASLLVAVAVTALGGLVVGLAAARLRG 146 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 YLA TL ++ + + + + NG+ G+ + ++ Sbjct: 147 PYLAGVTLAVATLVPAVTTIFTGVFNGEQGLRFPAQTPPAAL------------GAYFQP 194 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 E ++ ++ LG L+ ++ L R+ + R +RD++ A + ++ AF VS+ Sbjct: 195 ERWLAWIALGAALLTMLLLANLVRSRFGRSLRAVRDDEVAARLAGIPVARTQVLAFVVSA 254 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A G+ G +A ++P F ++ ++ +++GG+ SL+ +L+ + +L Sbjct: 255 ACAGLGGGVYAMLTATVAPGKFPLDLSLFLLMAIVIGGLGSLAGAVWGAVLLVALQDLPG 314 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + S + + L +V+L L Sbjct: 315 LLTEHLSLSAGLAQRLEGNLALAVFGLILIVVMLAAPGGLQG 356 >gi|71906008|ref|YP_283595.1| inner-membrane translocator [Dechloromonas aromatica RCB] gi|71845629|gb|AAZ45125.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Dechloromonas aromatica RCB] Length = 310 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 125/323 (38%), Gaps = 30/323 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + + L L + + +++ I + GL++++G G +SL IGAY Sbjct: 9 LYVVIAILLVLPFVMPNSFYLDLAVRMAINAVIVLGLNLLIGFAGQISLGHAGFLGIGAY 68 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L + +G L + A+ +G ++ P K +G+YLA+ATL + I L Sbjct: 69 ASAVLPTHFGWHPLLAMGAGAVATGILAAVVARPIFKLKGNYLAMATLGLGIIISIALRN 128 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G G+ V + + Y+V+ + +S L Sbjct: 129 EAQWTGGPDGMPVPA---------------MGLFGFELSNDKQWYWVVALLLSVSVWASL 173 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + A R + ++ A + ++ K++ F +S+ F + G+ A +SP+ Sbjct: 174 NLIDSPFGRALRALHGSEVASQVVGVDVVRYKVAIFVLSAVFASLMGSVTAHYVGFVSPN 233 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F +I ++++V++GGM S+ +L + + Sbjct: 234 FADFFHSIELVTMVVIGGMASVYGSLVGAVLLTALPQALATFEG---------------W 278 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 T + L L ++ L+ Sbjct: 279 ETVVFGAILMLSMIFLPKGLVPT 301 >gi|312879927|ref|ZP_07739727.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] gi|310783218|gb|EFQ23616.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] Length = 335 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 124/328 (37%), Gaps = 24/328 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L V L + + + I +L+Y + +I+ G G +S + + Sbjct: 10 LLWYGFVALLAALPLVPGLIGNSFRAHVFILVLLYASMSQAWNILGGYCGQVSFGHSVFF 69 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY + YG + WL + A+ + A +++ P K +G Y AIAT + EIF Sbjct: 70 GIGAYGAGLAVVTYGGTPWLGALLGALAASAVSVLVSYPCFKLKGHYFAIATFAIVEIFN 129 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + W + Y + + + YY LG+ L Sbjct: 130 RLFMVWDWVGGALGLDYPILPDGWKDFVWTNTKEGY-------------YYGALGLFVLV 176 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ W+ R + R +R+ Q+ SL KL+A A S+ G+ GAFF Sbjct: 177 FGVVRWIERHRLGAYLRAVREGQETAESLGVNSTVVKLAAMASSAFLAGLCGAFFVQYNF 236 Query: 255 RISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 R+ P M ++ + + ILGG+ + A+LI + E + + Sbjct: 237 RVDPPMVMSLDMSMKFVLVTILGGVGTFLGPLLGAAVLIPLQEYTRAYLGSLGSGM---- 292 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + L+++ + ++ Sbjct: 293 ------DLIIFGALIILMMVKQPRGIMG 314 >gi|192292938|ref|YP_001993543.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192286687|gb|ACF03068.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 357 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 156/343 (45%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF R ++ IL ++ V + Y S+ IQI I+ + A GL+I+VG Sbjct: 21 TIFPTRTSRNAAILGIVLVCFA--------PLVLSGYWLSILIQIGIFGIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +S+ + +GAY+ L + + + ++ IP++ +++ G++ G+P+ + +G Y Sbjct: 73 FTGQISIGHAAFFLLGAYTSAYLNNHFPIPVFFAIPLAGLVTALVGLVFGVPAARLKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L IATL I + + + + G V ++ F + + Sbjct: 133 LVIATLAAQYILIDFFSRAEWFSGGS---------------VPAMANPFSLFGYVLQGDK 177 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +YV+L +S ++ L RT A +RD+ + + + + +FA+++ F Sbjct: 178 QYFYVVLAYLLVSYILVTNLMRTRDGRALVAVRDHYLSAEIMGINLTKYRTLSFALAAFF 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE----L 297 G+AGA +A + +S + F +I+ ++++I+GG+ S+S TA ++ + E L Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPETMEWL 297 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 G+ + L+ + + + + + L ++ L Sbjct: 298 SSGLKGSAIDRALELNNNLTFLREIAIGLIIILFLVFEPDGLA 340 >gi|298294170|ref|YP_003696109.1| inner-membrane translocator [Starkeya novella DSM 506] gi|296930681|gb|ADH91490.1| inner-membrane translocator [Starkeya novella DSM 506] Length = 344 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 64/334 (19%), Positives = 123/334 (36%), Gaps = 35/334 (10%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + LL F + + +Y+ I I+++ A L++++G G LSL V + IGAY+ Sbjct: 7 IIVLLFFASVPWWLTDQYLLHTLITTGIFILAAMSLNLLLGYTGQLSLGHVAFFGIGAYT 66 Query: 81 YVILG-------------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + L + +++ CG ++G S + RG Y I T+ Sbjct: 67 SALTALGFDVELFGLFRVVHEPWPPVLGLLFGTLVAALCGFVIGKLSFRVRGAYFVIVTI 126 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +E+ + + + W +T G + L F + + YYV+ Sbjct: 127 SFAEVTRLVSLNWVELTQGPLALPGIPPLTIG---------FPGLGYMTLWEKTENYYVV 177 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L L+ +I L + A ++ N+ S+ + + A VS+ G AGA Sbjct: 178 LAFIVLAYILIKRLVNSRFGRAMIALKGNESLATSVGIDVTRYLVIAAIVSAGMAGCAGA 237 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A I P +F F + ++ +VI GG +L+ I + Sbjct: 238 LYAHYIQIIDPMIFMFLNTVTMVIMVITGGKGTLAGPLVGGLIFGLAPVVLRSYVG---- 293 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + +V+ + ++ Sbjct: 294 ---------PEIQWILYGLLMIVVVFVLPQGIVP 318 >gi|46198524|ref|YP_004191.1| branched-chain amino acid transport system permease protein livM [Thermus thermophilus HB27] gi|46196146|gb|AAS80564.1| branched-chain amino acid transport system permease protein livM [Thermus thermophilus HB27] Length = 355 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 66/306 (21%), Positives = 120/306 (39%), Gaps = 21/306 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + + I + A GL ++VG G +SL +GAY+ L L I Sbjct: 56 PYPMYVATLVAIGALSALGLHLLVGGAGQISLGHAAFMGVGAYAASHLTGPLA---PLGI 112 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + I+ G+++GLPSL+ +G YLAIATL + + W+ +T G G + Sbjct: 113 LLGGGIAAFLGLLLGLPSLRIKGVYLAIATLAFQFLADYVFKTWEAVTGGIRGRTLPPPE 172 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++Y++L L T A+R +RDN Sbjct: 173 ---------------VLGLVLDTPEKLWYLVLLFALPLFFYGKRLLMTRAGRAFRAVRDN 217 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + KL AFA+S+ + G+AG A ++P+ F S +I +++VI+G Sbjct: 218 DLSARVAGVDLTRTKLLAFALSAFYAGVAGGLLAGLYKAVTPEYFPLSVSIQYLAMVIVG 277 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G ++ ++ + E+ + + + L +++ Sbjct: 278 GAGTVLGAVLGAFFVLLIPEVLNSFVGALGPE---YAAQLAAWRNVVFGGLILLFLVLEP 334 Query: 337 HSLLRL 342 L+ L Sbjct: 335 LGLVGL 340 >gi|163731682|ref|ZP_02139129.1| branched-chain amino acid ABC transporter permease [Roseobacter litoralis Och 149] gi|161395136|gb|EDQ19458.1| branched-chain amino acid ABC transporter permease [Roseobacter litoralis Och 149] Length = 319 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 72/325 (22%), Positives = 137/325 (42%), Gaps = 27/325 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + L F+ L + KY + + LI+V+ A G +++ G G +S+ I Sbjct: 8 AIFYAVALAGFILLPQFIAVKYYLHLSVLALIWVIAAQGQNLIQGYTGYVSIVQAGFMGI 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAYS ++G + L +WL I ++ ++ ++ G PSL+ +G Y AI TL + + + Sbjct: 68 GAYSTALMGIHFDLPVWLTITLAPFVTAFFALLTGYPSLRVKGHYFAIVTLAFNMVIFIV 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L+ + +T G+AGI + R YY +L + L + Sbjct: 128 LMNFHQLTQGEAGITGIPKPGDNNGMFNWRDRE------------VYYYFVLIIAVLMTT 175 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + R+ I IR N+ ++ KL AF +S+ F G+AGA +A + I Sbjct: 176 LAALIIRSRIGQTLIAIRQNEDLVGAIGIAAWKYKLFAFVISAMFGGLAGALYAHYQSFI 235 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P++F ++++ I VI+GG +++ ++ + E Sbjct: 236 NPEIFGVAQSLDAILAVIVGGSGTIAGPIIGAFFVVFLPEYLRF---------------A 280 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + L + L L + ++ Sbjct: 281 DSFRLILYGLVLVLATIFMPRGIVG 305 >gi|313680104|ref|YP_004057843.1| amino acid/amide ABC transporter membrane protein [Oceanithermus profundus DSM 14977] gi|313152819|gb|ADR36670.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Oceanithermus profundus DSM 14977] Length = 353 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 69/323 (21%), Positives = 133/323 (41%), Gaps = 16/323 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + L+ + + + + ILIY + GL+I+ G GL+++ +GA Sbjct: 29 ASLVVFLIGMLVLPQFLSRGNMQILDLILIYALAVLGLNIITGYAGLINIGHAAFLGVGA 88 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ ++ L W ++PVS +++ A G ++G+P+L+ + YLAIATL IF+ + Sbjct: 89 YTAALVA--PYLPFWAVLPVSGLVAAAAGAVVGIPALRIKHLYLAIATLAFQLIFEWAV- 145 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + L G + F + F + F YYV + + A Sbjct: 146 ------------GHSPALEQGGAMAMPRVVFLGYKVGFKNHHYFWYYVTFVVLVIMAFGF 193 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT + +RDN +A ++ K+ AFA+ + + G+AGA +A + Sbjct: 194 RNLLRTRFGRSLVAVRDNDRAADAMGMDPGRTKVFAFALGAFYAGVAGALYAYWSRAVVI 253 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + +I +++ I+GG+ +L A L + +++ Sbjct: 254 EDYSLMISIKFLAMAIVGGLGTLVGSFFGPAFLELLDINMETFSYWIKTIYNPPGVDVGS 313 Query: 319 R-HTTLMVIALFLVILMRSHSLL 340 +A+ L ++ L Sbjct: 314 AIRPLAFGLAIVLFLIFEPRGLA 336 >gi|163796039|ref|ZP_02190002.1| inner-membrane translocator [alpha proteobacterium BAL199] gi|159178794|gb|EDP63332.1| inner-membrane translocator [alpha proteobacterium BAL199] Length = 387 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 121/337 (35%), Gaps = 14/337 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + +L + + + + + I+ + A G +I+ G G LS +G Sbjct: 32 FLIFALAVLTMPIWLSPIGAAYPDLVQKFAIFGILAIGFNILFGLTGYLSFGHAAFLGVG 91 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +Y+ V ++I I + G +++G SL+ G Y +I TL +++ N+ Sbjct: 92 SYAAVWSFKLLTMNIVPAILFGVLAGGVFALLIGYVSLRRTGIYFSILTLAFAQMSYNLA 151 Query: 138 IK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 PITNG+ G+ +A + + +YV M L+ Sbjct: 152 YSVLTPITNGETGLQLALHDPRILDGPAGAGLPSTNLFGMLTVGYTGFYVCAVMLILAYY 211 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + +RR+ A R I+ NQ L+AF +S + G+AG+ A Sbjct: 212 LAMRIRRSPFGMALRAIKSNQNRMNYTGFNTRPYTLAAFVISGMYAGLAGSLMAVVDPLA 271 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK----- 311 + +++ + V+ + ILGG +L I+ + N + Sbjct: 272 GAERMQWTASGEVVLMTILGGSGTLLGPVLGAGIIKYFENIFSAFNDQVLGRIFDFLPEG 331 Query: 312 --------FDCSFNMRHTTLMVIALFLVILMRSHSLL 340 F + + L+++ ++ Sbjct: 332 LQEAAVVLFSPFVGEGWHLTLGVVFMLIVIFLPGGVM 368 >gi|163761455|ref|ZP_02168528.1| branched-chain amino acid ABC transporter, permease protein, putative [Hoeflea phototrophica DFL-43] gi|162281299|gb|EDQ31597.1| branched-chain amino acid ABC transporter, permease protein, putative [Hoeflea phototrophica DFL-43] Length = 651 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 99/311 (31%), Gaps = 26/311 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLI 96 IY + A GL+I G +G++++ IGAY+ ++ Y +SI + + Sbjct: 362 LDGLSLASIYFLAAIGLAITFGVMGVINMAHGEFIMIGAYTGYVVQQIIPDYTVSIIVAL 421 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ ++ G+ + + + + TL+ + L + G + Sbjct: 422 PLAFAVAFMAGVALERLVI-RHLAHRPLETLLATFGISIALQQIAKNIFGTQARPLTAP- 479 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 S + + V + + ++ L RT + R + N Sbjct: 480 --------SWLDGAWVLNDVVSISYIRIAIFVLALIFLGLLLFILNRTRLGLEVRAVTQN 531 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + S+ + F + S G+AG S + V++G Sbjct: 532 PRMASSMGINPDRINMLTFGLGSGIAGIAGVAIGLFAQVTSELGSSYIVQS--FMTVVVG 589 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ ++ + +L N + + F + R Sbjct: 590 GVGNIWGTLAGAGMIGSLQKLIEFFNPSNTLAAQTYMIIFIIIFI-----------QFRP 638 Query: 337 HSLLRLRTPSN 347 ++ L+ + Sbjct: 639 KGIIALKGRAA 649 >gi|91781013|ref|YP_556220.1| branched chain amino acid ABC transporter ATPase/inner membrane protein [Burkholderia xenovorans LB400] gi|91693673|gb|ABE36870.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 596 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 117/325 (36%), Gaps = 23/325 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V L L + + ++ I + + GL ++ G G+ S + AY Sbjct: 6 LVAVGCLALVVAPLVLPDFYTTLLIYTGLASIVVLGLVVLTGVGGMTSFGQATFVGLSAY 65 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + + G S W+ +P++ +++ ++GL +++ G YL + T+ S + Sbjct: 66 TTGAISTTLGWSPWVTLPIAVLLTCLAAAVIGLLTVRLSGHYLVLGTVAWSVGLYYLFGN 125 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + G GI + F G ++ YY++ + ++ + Sbjct: 126 LPFL-GGYNGISDIPPITFFGFSLAGSR--------------PSYYLIWAVVAVAVVCTM 170 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + A R++R N S I +L F ++ ++G +A ++P Sbjct: 171 NLLDSRTGRAIRSLR-NPVLAESFGIDIYRLRLPVFIYAAFLAAISGWLYAHYFRFVNPA 229 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F F +I +++LGG T + +L+ L + + +D Sbjct: 230 PFGFDGSIDYAFMLVLGGATQVFGAIVGAFVLVVGKMLLQIGLTHVLPGPVHWD------ 283 Query: 320 HTTLMVIALFLVILMRSHSLLRLRT 344 + + + +L R Sbjct: 284 -QIFFGLLIIGLFHHARSGILSARR 307 >gi|256830969|ref|YP_003159697.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256580145|gb|ACU91281.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 318 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 76/324 (23%), Positives = 148/324 (45%), Gaps = 30/324 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L + Y + + +Y + A L++++G GL + YAIGA Sbjct: 6 ILYLAFALLMASCPMFLNAYWTDVFNNVGLYTILALSLNVILGHAGLFHMGHAAFYAIGA 65 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN-IL 137 Y+ IL + +G+ + ++P++ +++G MI+ P + RGDYL I T+ + EI + ++ Sbjct: 66 YTTAILNTTFGIPVLWIMPLAGIMAGFFAMIVARPIIHLRGDYLLIVTIGIVEIVRIALI 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 IT G GI+ R G + +F +Y++ G ++ + Sbjct: 126 NNVFDITGGANGIFGISRPSVFGYKISKPDQF--------------FYLIWGFAAVTIFL 171 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L L + A I++++ A + KL AF + + + GM G +A+ I+ Sbjct: 172 LLRLEHSRFGRALMYIKEDEVAAGGSGINVSHHKLVAFIIGAVWAGMCGTIYASKMTIIA 231 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F+E++++ +IVILGG S+ + +L+G+ E+ G+ Y Sbjct: 232 PESFSFAESVVLFTIVILGGAGSIPGVILGAFLLVGLPEVFRGLAEY------------- 278 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + A+ L+++ R+ LL Sbjct: 279 --RMLVFGAAMVLMMIFRNQGLLP 300 >gi|171057449|ref|YP_001789798.1| inner-membrane translocator [Leptothrix cholodnii SP-6] gi|170774894|gb|ACB33033.1| inner-membrane translocator [Leptothrix cholodnii SP-6] Length = 361 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 87/319 (27%), Positives = 148/319 (46%), Gaps = 17/319 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88 + L+YV+ A GL+IVVG GLL L V YA+GAY Y ++ S + Sbjct: 31 WVRIMALALLYVLLALGLNIVVGYAGLLDLGYVAFYALGAYMYALVASPHLSLNFESVRA 90 Query: 89 ------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 IWL+IP +A ++ GM++G P+LK RGDYLAI TL EI + + + Sbjct: 91 AFPTGMHYPIWLVIPAAACVAAVAGMVLGAPTLKLRGDYLAIVTLGFGEIIRVFMNNLEH 150 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 N G ++ + S + + + YY+ L + S I L Sbjct: 151 PVNITNGPRGISQIDSMNLFGFSFGKPYDLFGFVIPSVALYYYLFLVLVVGSVVICHNLE 210 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + I AW IR+++ A ++ KL AF + + F G++G+ FAA + ISP+ F Sbjct: 211 NSRIGRAWMAIREDETAAKAMGLNTRNLKLLAFGMGATFGGVSGSMFAAFQGFISPESFT 270 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 E+++++++V+LGG+ + + +L + E+ S+ + Sbjct: 271 LMESVMIVAMVVLGGIGHIPGVILGALLLAALPEVLR-YVAGDVQSMTGGRLDAAILRQL 329 Query: 323 LMVIALFLVILMRSHSLLR 341 L+ A+ +++L+R L Sbjct: 330 LIASAMIVIMLLRPRGLWP 348 >gi|148979616|ref|ZP_01815621.1| branched-chain amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] gi|145961701|gb|EDK26998.1| branched-chain amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] Length = 542 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 98/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ GL+I G +G++++ IGAY+ +L I L + +S Sbjct: 257 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMIGAYTTYVLQLLMPNHIGLALILSIPA 316 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G+ + +L L + +L + + + + Sbjct: 317 AFIVSGLVGIAIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 370 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + Y++L + +++ L++T + R + N+ + Sbjct: 371 TPEWMSGALQLNPMLSLTYNRLYIILFCGLVFMGLLMVLKKTPLGLQVRAVSQNRGMARA 430 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + S G+AG + + + I +V+ GG+ +L Sbjct: 431 MGIRSERVDAMTFGLGSGVAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 488 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L ++ L+++ + L I R L Sbjct: 489 GTFVAGLSLGLFNKILEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 535 Query: 343 RTPSNF 348 R + Sbjct: 536 RGRAAE 541 >gi|291448870|ref|ZP_06588260.1| branched-chain amino acid ABC transport permease [Streptomyces roseosporus NRRL 15998] gi|291351817|gb|EFE78721.1| branched-chain amino acid ABC transport permease [Streptomyces roseosporus NRRL 15998] Length = 392 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 16/324 (4%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY---------- 81 ++ G+ + + A GL+++ G+ G LS+ A+GAY Y Sbjct: 36 PFYLDRFWLQAGLFAMAAAIGAIGLNMLTGATGQLSMGHAFFLAVGAYGYCVLAGESGTE 95 Query: 82 -VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 + GL WL ++ +++GA G I + + RG YL IATL + I Q++L Sbjct: 96 NGHTLTGLGLPTWLAAILAVLLAGAAGGIFSPIAGRLRGAYLGIATLALIFIGQHVLFNA 155 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G G V F T S + P + + L + L A +L Sbjct: 156 GSLTGGYNGRAVPPLSVFGFTFDDSELIVAAVPFGSSEKLWYAGLLALLLSALFARGVLR 215 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 R A IRD++ A + + + F +SS + G+AG A R P+ Sbjct: 216 GR---PGRAMNAIRDHRIAAGVMGVPVARYRAGVFVLSSMYAGLAGVLLALVFQRTVPEY 272 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNM 318 F ++ ++++++GG+ S++ A + + ++ + ++ + Sbjct: 273 FGMILSLEYLAMIVIGGLGSVAGAVIGAAFVSLLPQVFTHYSDSLPLVSAPGTGGLAPGE 332 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 L A+ V+L L RL Sbjct: 333 ASRYLYGAAVVAVVLFLPGGLARL 356 >gi|254428075|ref|ZP_05041782.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] gi|196194244|gb|EDX89203.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] Length = 354 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 124/321 (38%), Gaps = 28/321 (8%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + ++ L +Y + ++ + +G++I+ G G L+L +AIGAY+ Sbjct: 18 IVMIVAALLFPFVAGNEYQIYVMALAFVWAIAVYGMNIITGLCGQLNLAHGGFFAIGAYT 77 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 IL G + W + + G ++G+ SL+ + Y AI TL + I +L KW Sbjct: 78 LAILTVDNGWAFWPAFIAAGAVGAILGFLVGVISLRLKEHYFAIFTLCVGFIIYLLLDKW 137 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G GI F YY+ L LS + Sbjct: 138 EELTHGALGIINIPAPS-------------GFGLVDFTETTPFYYLALAFMVLSIWLASR 184 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + + + IR + SL ++ K+ AF +S+ + +AGA +A I P Sbjct: 185 IAHSLLGRTFLAIRISDDLAASLGINLMRNKVLAFVLSTTYASVAGALYAGMVRFIGPAE 244 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + + +I+ +++GG+ +L T + + + + Y Sbjct: 245 AEVTHTFDMITYLLVGGIGTLMGPLLGTLAITWLTQSLQFLEEY---------------R 289 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + L ++++ ++ Sbjct: 290 MIVFGPMLVVLVIFFPKGVVG 310 >gi|293607062|ref|ZP_06689405.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292814552|gb|EFF73690.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 383 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 70/309 (22%), Positives = 131/309 (42%), Gaps = 20/309 (6%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYGLSIW 93 Y + I+++IY +FA L ++VG GL+SL + IGAY +L S+W Sbjct: 20 GSDYYTGLAIKVMIYAIFALSLQLLVGGAGLVSLGHAAFFGIGAYVAALLSPESAAASLW 79 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L+P + + + + G +L+ RG Y + TL S++ + + G GIY+ Sbjct: 80 WLLPAALLAAALYALATGALALRTRGVYFIMVTLAFSQMAYYVFHD-TKVGGGSDGIYLY 138 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 R + + + Y+ +L L+ + LRR+ A I Sbjct: 139 FRPE---------LAVGGWVPFDLGNATTFYFFVLACLALAWGFLALLRRSPFGAALAGI 189 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R N++ + + KL+A+ V + +AG FA ++P++ + ++ +V+ +V Sbjct: 190 RINEQRMRAAGYSTYPYKLTAYVVGATLASLAGFLFALKDGFVTPELLAWEQSGLVLLMV 249 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ILGGM SL T L+ + EL + + + IA+ ++ Sbjct: 250 ILGGMASLGGAVIGTVTLVLMQELFQSQALFG---------DYARHWHLPLGIAIIALVA 300 Query: 334 MRSHSLLRL 342 + + + L Sbjct: 301 LLPNGIAGL 309 >gi|152995844|ref|YP_001340679.1| ABC transporter-like protein [Marinomonas sp. MWYL1] gi|150836768|gb|ABR70744.1| ABC transporter related [Marinomonas sp. MWYL1] Length = 599 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 117/332 (35%), Gaps = 31/332 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L+ L + + ++ I +Y + GL ++ G G+ S +GAY Sbjct: 6 LIIFGLVVLAIAPQVLPTFQVTLLNYIGLYALVVLGLVLLTGVGGMTSFGQAAFVGLGAY 65 Query: 80 SYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 S + S W+ + + +++ A + +G +LK G YL + T+ Sbjct: 66 STAYLTTTEQLPSWLAWSAGSPWIGLLIGLILTAAVALFLGALTLKLSGHYLPLGTIAWG 125 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + G GI L G + + +YY++ + Sbjct: 126 ISLYYLFGTMSS-MGGHTGISGLPSLSLFGVLLDKGEK--------------IYYLIWAI 170 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L+ I L + A R ++ Q S+ +K+ F +S+ F G++G +A Sbjct: 171 LMLAVWITSNLLNSREGRAIRALKGGQLMAESMGVNTFRSKMVIFLISALFAGISGWLYA 230 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 ++ ++P F S I + + ++GG+ S+ IL + + Sbjct: 231 HTQRFVNPTPFGLSMGIDYLFMALVGGVGSVWGALLGAGILTMLKQWLQDWLPLVMGG-- 288 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + + ++ + L Sbjct: 289 -----NGQYEAIVLGLLIVFMMQRSPGGIWPL 315 >gi|289767397|ref|ZP_06526775.1| branched amino acid transport system permease [Streptomyces lividans TK24] gi|289697596|gb|EFD65025.1| branched amino acid transport system permease [Streptomyces lividans TK24] Length = 500 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 63/337 (18%), Positives = 131/337 (38%), Gaps = 25/337 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 AV LLL + T+ Y S+ + + + A GL +VG G +SL +A+G Sbjct: 168 AVFVVLLLTVPAVFTRVPFYTMSVAVLMCLQATAALGLVPLVGRAGQISLGQAAFFAVGG 227 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL R+ ++ L + A ++ A ++GL + +G YLA+ATL + ++ Sbjct: 228 YTSAILTGRWHVNALLALTAGAALAMAVAYVVGLFIFRAQGQYLALATLSFGLVVSSLAN 287 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + +T G+ L G + + + +YY++ G+ ++ + Sbjct: 288 QLP-LTGASNGLAGIPSLAPFGVELDTD--------------LSVYYLVAGVLLVAVLSV 332 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +A + D+ A + + + A A+++ +AG+ +A + Sbjct: 333 DALLRSPAGDALSALGDSPVATEAAGVSAAALRRGALALAAGLASVAGSLYAHWSSFMDS 392 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 ++ ++ I +GG+ + +++ E + F + Sbjct: 393 GQAGLLNSVQLLVIASVGGLRTPWGAPLGALVIVTFSEASKDLIPKV------FPSATGN 446 Query: 319 RHTTLMVIALFLVILMRSHSLLR----LRTPSNFLER 351 + IAL V+L + R S + Sbjct: 447 FDIIVYGIALIAVLLFLPRGVGGVTAVRRERSVRKRQ 483 >gi|149375945|ref|ZP_01893712.1| inner-membrane translocator [Marinobacter algicola DG893] gi|149359825|gb|EDM48282.1| inner-membrane translocator [Marinobacter algicola DG893] Length = 347 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 15/322 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL L + Y+ +G + I V+ GL+I+ G GL+SL +GA Sbjct: 24 LWLGFFLLILMVFPFAVDSYLLYLGCLVGIAVISTTGLNILTGFTGLISLGQAGFMGVGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ L GL + + ++ +++ A G+++GLPSL+ +G YLAIATL S I Sbjct: 84 YTVAWLSINTGLPFPITLVLAGLMAAAVGILVGLPSLRVKGLYLAIATLAASVFLHFIFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W+P+T G G+ + F T + Y++++ + L Sbjct: 144 EWEPVTGGMGGLSLEPAHLFGLTFQSDFMM---------------YFIIVPLAVLMVLAA 188 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + RT I A+ IRD + L ++ KL +FA+SS + G+AG FA ++P Sbjct: 189 RNVFRTRIGRAFIAIRDRDISAEILGINLLRYKLMSFALSSFYAGVAGGLFAYFYRVVTP 248 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F S +I ++ VI+GGM +L A + V E + + Sbjct: 249 ESFPLSMSIFYLAAVIVGGMGNLLGGILGAAFMTLVPEALKLLTAALTPFYPNAPVFMSP 308 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 + + ++ H L Sbjct: 309 MLEIIFGGLIVGFLIFEPHGLA 330 >gi|149378303|ref|ZP_01896012.1| inner-membrane translocator [Marinobacter algicola DG893] gi|149357410|gb|EDM45923.1| inner-membrane translocator [Marinobacter algicola DG893] Length = 550 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 97/306 (31%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+I G +G++++ +GAY+ + L + S Sbjct: 265 LSLGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWGMQQLLPGQPGLALIFSIPA 324 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 G+ + +L L + +L + + + Sbjct: 325 GFLVAATAGIIIERSVIQFLKGRPL------ETLLATFGISLILQQLVRTVISPQNRTVV 378 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + YVL + A++++ +R+T + R + N+ S Sbjct: 379 TPEWMSGSLVINDALSLTLNRLYVLAFALIVFAALMMIMRKTRLGLEVRAVTQNRAMARS 438 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + FA+ S G+AG + + + I +V+ GG+ +L Sbjct: 439 MGIRATRVDIMTFALGSGVAGLAGVALSQLTNV--GPNLGQNYIIDSFMVVVFGGVGNLW 496 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L + +L ++++ + L I R L Sbjct: 497 GTLIAGLSLGTINQLLEPWAGAVLAK-------------IIVLVFIILFIQKRPKGLFPQ 543 Query: 343 RTPSNF 348 + + Sbjct: 544 KGRAAE 549 >gi|94501624|ref|ZP_01308140.1| Branched-chain amino acid ABC-type transport system, permease components [Oceanobacter sp. RED65] gi|94426200|gb|EAT11192.1| Branched-chain amino acid ABC-type transport system, permease components [Oceanobacter sp. RED65] Length = 541 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 97/295 (32%), Gaps = 21/295 (7%) Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113 GL+I G +G++++ +GAY+ ++ +I + + V+ + ++G+ Sbjct: 267 IGLAITFGVMGVINMAHGEMIMLGAYTTFVIQQLMPNNIGMSLVVAIPAAFLVSGLVGVI 326 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 + +L L + +L + + + + Sbjct: 327 IERTVIRHLYGRPL------ETLLATFGISLVLQQAVRSIFGPLNQDVITPDWLAGTFMV 380 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + Y+++ + A + L L++T R + ++ S+ + Sbjct: 381 NPGLELTYNRLYIIIFSLMVLAGLALVLKKTLFGLQMRAVTMDRPMASSMGIKTGWVDAL 440 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 F + S G+AG + + + I +V+ GG+ +L L Sbjct: 441 TFGLGSGIAGIAGVALSQLTNV--GPNLGQAYIIDSFMVVVFGGVGNLWGTLVGAMSLGV 498 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++ + ++++A+ L I R L L+ + Sbjct: 499 ANKMFEPLAGAVLAK-------------IIVLVAIILFIQKRPRGLFALKGRAVE 540 >gi|284167400|ref|YP_003405678.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] gi|284017055|gb|ADB63005.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] Length = 358 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 126/326 (38%), Gaps = 22/326 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L V +L L Q + ++ +++L + + A L V G GLLS Y Sbjct: 26 LTLLVGIAILAALGPVVQSVQPFWLNLLVRMLTFALLALSLDFVFGYAGLLSFGHAAMYG 85 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 G Y+ +L + S +++P++ + I+G S++ RG Y A+ TL +++ Sbjct: 86 AGGYAAALLVTEVTASALVVLPLAVVTGVIVATIIGWLSVRARGIYFAMLTLAFAQMLYV 145 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + P T G I+ + + YY+ LG+ LS Sbjct: 146 VAFTDLPATIAG------METVTGGDNGLYGIQLYELFGIDFRERLNYYYLTLGIVALSL 199 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + I+ L + + IR+N++ + + K+ AFA+S F +AGA + + Sbjct: 200 AGIVRLANSPFGRVLQGIRENEERTEFIGYDVQRYKVIAFAISGGFASLAGALYVPFQSV 259 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +P + ++ + ++ +V+LGGM + +++ + + + Sbjct: 260 ANPQLLHWTVSGELVVMVLLGGMGTFWGPMLGAGLVVFLEDRLGSVA------------- 306 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 ++ V++ L Sbjct: 307 ---SWEVILGSLFVAVVVFAPRGLAG 329 >gi|302874076|ref|YP_003842709.1| inner-membrane translocator [Clostridium cellulovorans 743B] gi|302576933|gb|ADL50945.1| inner-membrane translocator [Clostridium cellulovorans 743B] Length = 318 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 77/329 (23%), Positives = 138/329 (41%), Gaps = 41/329 (12%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V LLF + + Y + LI ++ A L+++VG G L L +IGAY Sbjct: 17 IVIYFLLFGLIKSKIISNYYAGIINLTLINIILAVSLNLIVGFTGQLCLGHAGFMSIGAY 76 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 ++ + G + + I A+++ ++G P+LK GDY AI TL EI + I++ Sbjct: 77 VSAVITIKLGTPLVISIIAGAIVASIIAALIGYPTLKLTGDYFAITTLAFCEIIRIIIM- 135 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 G G+ ++L ++ +I Sbjct: 136 NIDFVGGARGLTGIPLKSN-------------------------LLIILIFMTITIIVIY 170 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + ++ A ++R+++ A S+ K+ AF +++ F G+AG +A I P Sbjct: 171 NIIHSSQGRAMLSVREDEIAAESMGIHSFKYKILAFIIAAFFAGIAGGLYAHYIGYIQPT 230 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 +F F+++I ++ V+ GGM SLS AT +L + EL +N Y Sbjct: 231 LFDFNKSIDYLTFVVFGGMGSLSGSVLATILLTFLPELLRDLNDY--------------- 275 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + +AL L+++ R LL + S Sbjct: 276 RMIIYPLALILLMIFRPQGLLGNKEVSLK 304 >gi|170721344|ref|YP_001749032.1| ABC transporter-like protein [Pseudomonas putida W619] gi|169759347|gb|ACA72663.1| ABC transporter related [Pseudomonas putida W619] Length = 828 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 122/321 (38%), Gaps = 32/321 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + A Y + + V GL+I++G G +S + YAIGAY Sbjct: 12 LALFGVASIGLALGLDSYWLLILTLYALAVTVGVGLNILIGLSGQMSFGHIAFYAIGAYL 71 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L + +P++ + G ++ +P+L+ G YLA+ T+ + + N LI+W Sbjct: 72 SALLTLAGLP-LSGALPLAGLGCAVLGGLLAIPALRVSGPYLAMITIAFALVVHNGLIEW 130 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T G G+ + + + + + + Sbjct: 131 RSVTGGANGLMGIPLPE----------------LGTLDPALLLALASVLLMLAALVFYWS 174 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L+R+ A R ++ ++ A SL + + AFA+S+ G AGA A I+P Sbjct: 175 LQRSGWGLAMRAVKASEIAARSLGVNPVQTRTLAFALSAGLAGAAGALVAPVLMFINPAA 234 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F FS++I+ + VI+GG L +++ + EL Y Sbjct: 235 FPFSQSILFVLAVIVGGAGMLFGPVLGALVIVLLPELLADFAEY---------------R 279 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + L V+ +L Sbjct: 280 LLAFSVLLLAVLWAAPRGVLG 300 >gi|86750728|ref|YP_487224.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86573756|gb|ABD08313.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 328 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 69/327 (21%), Positives = 130/327 (39%), Gaps = 24/327 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ + + Y+ ++ + L+Y + +I+ G G +SL + + + Sbjct: 13 LIVATVLACIAALVPLFVKDVYVQNIMVLTLMYAALSQAWNILGGYCGQISLGHALYFGL 72 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L +++G+ W + +IS A + +G P+ + RG Y IAT++++EI + Sbjct: 73 GAYTTALLFTKFGVLPWFGMLGGGLISAAIALALGYPTFRLRGHYFVIATIVIAEIGFLL 132 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 W + ++ YY L C ++ Sbjct: 133 FHNWDWAGAALGIDIPVRGDSWAKFQFTR-------------SKLPYYYFALVFCCVAWL 179 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + WL + WR ++DN +A SL + +K+ A AVS+ + GAF+A I Sbjct: 180 VTWWLENSKWGYWWRAVKDNPEAAESLGVVVFNSKMGAAAVSAFLTAIGGAFYAMFVSYI 239 Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P+ F ++++ +LGG+ +L ILI + EL + Sbjct: 240 DPESVMTFQFSLLMALPAVLGGIGTLWGPVLGAVILIPLTELTRSFVGGSGRGV------ 293 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 L + L+ L R L+ L Sbjct: 294 ----DLILYGTVIVLISLARPEGLIGL 316 >gi|163741933|ref|ZP_02149322.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161384654|gb|EDQ09034.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] Length = 361 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 71/325 (21%), Positives = 136/325 (41%), Gaps = 17/325 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V L++ ++ +LI+ + GL ++ G G SL AIG Sbjct: 22 LLVYGALVMLALALPLLINEFYIGEVTNVLIWAIAGLGLMLLTGQTGQASLGHAAFLAIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ IL + + P++ +I+G G I+ +P+L+ G YLAIAT+ +S + +I+ Sbjct: 82 CYANTILIEQGLP-FVVAFPLAGVITGIVGGIIAIPALRLHGIYLAIATIALSILADDII 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + +P T G +G +IR F + YY++LG+ + Sbjct: 141 VFLEPWTGGVSGK------------FPDVIRLFGIEIERWTMPVRFYYLVLGVTVICTLF 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R+ + A+ +RD++ + ++ I K +AF +S G AGA + Sbjct: 189 YRNLLRSPLGRAFAAVRDSEVSATAMGVHIARTKATAFGLSCMITGWAGALMGYYAGAFN 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + F +I ++ ++++GG+ S+ ++ + + + S+L + Sbjct: 249 NETFSLVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQGLSILKD----SVLGSGVAIP 304 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 T + + L L IL L Sbjct: 305 GLETGVFGMILILFILFEPMGLYGR 329 >gi|239623305|ref|ZP_04666336.1| ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239522271|gb|EEQ62137.1| ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 342 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 136/323 (42%), Gaps = 23/323 (7%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 L + L + + YI S+ + +Y F +++ G G +S AIGAY+ Sbjct: 16 FVLLAVALLIPSIIKDNYIVSIILTCFLYGSFGMSWNVLGGFGGQISWCHSAFAAIGAYT 75 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +I + +G+S + +P+ ++S A ++G +L++RG + AI T+ +EI + IL+ Sbjct: 76 ALIFYNFFGISPLISMPIGVLLSYAFATLLGKVTLRYRGPFFAITTIAFAEILRVILLNL 135 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 IT G AG+YV V S + YY+ L + + + + Sbjct: 136 NSITGGSAGLYVRYNGEQPWNLVFSTDK-------------PFYYIALILMIIVLLVTKY 182 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI-SPD 259 + + + R I+ ++ A SL KL AF +S+A I +AG + I Sbjct: 183 VENSKMGYYLRAIKGDEDAAQSLGMDTPAVKLHAFQLSAAIISVAGMVYGCYMGYIEPQT 242 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 M +I + ++VI+GG+ S+ I+I +E Sbjct: 243 MCGLDLSIKIGAVVIIGGVGSVWGPILGAFIVIPAIEFASAFMGNVGGVGGT-------- 294 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 + L +V+++R ++ L Sbjct: 295 -QLFYGLILIIVVILRPEGMISL 316 >gi|240144009|ref|ZP_04742610.1| high-affinity branched-chain amino acid transport protein [Roseburia intestinalis L1-82] gi|257204045|gb|EEV02330.1| high-affinity branched-chain amino acid transport protein [Roseburia intestinalis L1-82] Length = 358 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 72/330 (21%), Positives = 133/330 (40%), Gaps = 24/330 (7%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + +V L++ + + A + + + + Y + A GL++ VG LG LS+ Sbjct: 18 ITFAMVIVAYLIVQILIAAGVLSSLMQGLLVPMCTYSIVAIGLNLCVGYLGELSIGHAGF 77 Query: 74 YAIGAYSYVILGSRYGLSIW-------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 +GA+S I +++ + ++ G ++G+P L+ RGDYLAI T Sbjct: 78 MCVGAFSSAFATKLLQNVIPNQILLFIIVLIIGTAVAAFFGFLIGIPVLRLRGDYLAIVT 137 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI +N++ + + + + I + + Sbjct: 138 LAFGEIIKNVINVLYIAKDTDGFHFAISNGNAIKLSDEGEWLINGAKGIAKIPHLSSFTA 197 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + M + I+ L + A IRDN+ A S+ I KL AF +S+A G G Sbjct: 198 GVIMILICLFIVYHLVNSRSGRAIMAIRDNRIAAESVGINITKFKLMAFTISAAIAGAGG 257 Query: 247 AFFAASRDRISPD--MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 +A + ++ F ++ +I+++ V+LGGM S A IL + E+ G++ Y Sbjct: 258 VLYAHNLSTVTATPANFGYNMSIMILVFVVLGGMGSFRGSIIAAVILTLLPEVLRGLSDY 317 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + I L ++L Sbjct: 318 ---------------RMLIYSIVLIAMMLF 332 >gi|291557911|emb|CBL35028.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Eubacterium siraeum V10Sc8a] Length = 358 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 135/335 (40%), Gaps = 23/335 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 K ++ + +++ + ID + + + +Y + A L++ VG LG L Sbjct: 4 PQTKKSFTTYIMVTLAFVIMMILSSTGNVSSQIDGLLVPLCVYSILAVSLNLTVGILGEL 63 Query: 67 SLNCVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL +GAY+ + + L I V + + G+++G+P L+ G Sbjct: 64 SLGQAGFMCVGAYASALFSIATKETILVEWVRFPLAILVGGIFAAIFGILIGIPVLRLNG 123 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +N+ + G+++A + + Sbjct: 124 DYLAIVTLAFGEIIKNVFAAL-YVGIDSKGLHIALNQADMNLEADGTEIIRGALGVKGVP 182 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + V + ++ I + A + IRDN A S+ I KL FA+++ Sbjct: 183 NDSSFVVGFILLLITLIISYSYINSRTGRAVKAIRDNSIAAESVGLNITKYKLITFALTA 242 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 G+AGA ++ + + F ++ +I+++ V+LGG+ ++ A +L + EL Sbjct: 243 FLAGIAGALYSHNYATLQASKFDYNLSILILVFVVLGGIGNIRGSVIAAVVLTLIPELLR 302 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +N Y + I L +++++ Sbjct: 303 SINSY---------------RMLIYSIVLIVMMIL 322 >gi|254788033|ref|YP_003075462.1| urea ABC transporter permease UrtB [Teredinibacter turnerae T7901] gi|237684047|gb|ACR11311.1| urea ABC transporter, permease protein UrtB [Teredinibacter turnerae T7901] Length = 563 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 99/319 (31%), Gaps = 22/319 (6%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 L K + + + ++ A GL+I G +G++++ +GAY+ + + Sbjct: 266 LSFFKFSENLLFGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMIMLGAYTTFAIQQLFP 325 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 I + + ++ + G+ + +L L + L+ I+ Sbjct: 326 SLIDISLFLAIPAAFLVSGSAGVLIERLVIRHLYGRPL-------DTLLATFGISLILQQ 378 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 R + + + + + Y+LL F+ + L LR+T + Sbjct: 379 AVRTYRANNVPVVTPDWMSGSWLINGAMSVTLNRVYILLFALFVLFMLALLLRKTLVGLQ 438 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + N+ S+ + F + S G+AG A S+ S I Sbjct: 439 MRAVTQNRAMATSMGIRSNWVDALTFGLGSGIAGIAGV--ALSQITNVGPNLGQSYIIDS 496 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +V+ GG+ +L L V + + ++ Sbjct: 497 FMVVVFGGVGNLLGTFVGAMSLGVVNKFLEPVTGAVIGKIIVLIFIILFIQ--------- 547 Query: 330 LVILMRSHSLLRLRTPSNF 348 R L L+ Sbjct: 548 ----WRPRGLFALKGRFVE 562 >gi|295680691|ref|YP_003609265.1| inner-membrane translocator [Burkholderia sp. CCGE1002] gi|295440586|gb|ADG19754.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 607 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 79/322 (24%), Positives = 129/322 (40%), Gaps = 29/322 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V + L L Y+ IY + A L++V G++G +SL IGAY Sbjct: 313 IVALVALAFVLPLVVPSSYVLQTLTNGWIYGLLALSLTLVAGTVGQISLGHAALLLIGAY 372 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L G S L IP++ +I+ A G ++ PS + RG Y++IATL + EI +++ Sbjct: 373 ASALLSVNLGWSPALTIPLAGLITAAIGTVLIYPSFRLRGHYVSIATLGIGEIIGLVVLN 432 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T G GI L G + + +Y+ L + L A + Sbjct: 433 WDSLTRGPVGITGIVPLSLFGWQLTGVR--------------AVYWFTLAVLVLLALLQA 478 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + + WR IR++ A + K AFA G+ G A I+ Sbjct: 479 RLLHSHLGRTWRAIREDDVAARAYGIRPNRYKAIAFACGGLAAGIGGGIAAHLYSYINYQ 538 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F +I+ +++VILGG+ S+ LI + EL Y Sbjct: 539 TFDSQVSILALTMVILGGLGSVIGAVAGAVALISLPELFRFAADY--------------- 583 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 + + L L++ R L Sbjct: 584 RMLIYGMILLLLVRFRPQGLFG 605 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 101/309 (32%), Gaps = 25/309 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +G + + +R GL + + + Sbjct: 6 DYTINGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGGFIGWLCLTRLGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + G+++ L+ IA L+ + +L + I G Sbjct: 66 LATVAGCALLGILIERIGLRPLQGAARIAPLLATIGISFVLDQLAQIVFGPDPRP----- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 V S + + + + + L+LR T + A R + Sbjct: 121 ------VPSSLPDWTLSIGGATIGSLDLLIAAIGIGAAGVLYLFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ G++G + I P M F + + +++G Sbjct: 175 RDAAQQMGVNVNAVNQAVFAIACGLGGLSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFG-------------TSYRDLFAFVLLLAFLVWRP 280 Query: 337 HSLLRLRTP 345 + L Sbjct: 281 NGLFSANRR 289 >gi|302550719|ref|ZP_07303061.1| branched-chain amino acid ABC transporter permease [Streptomyces viridochromogenes DSM 40736] gi|302468337|gb|EFL31430.1| branched-chain amino acid ABC transporter permease [Streptomyces viridochromogenes DSM 40736] Length = 603 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 77/361 (21%), Positives = 144/361 (39%), Gaps = 32/361 (8%) Query: 8 LNKYDKILCL---LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 L+++ ++L + + T++ + ++G+ ILI+ A GL+IVVG G Sbjct: 235 LDRFSQLLAANRSFTLAMGFAAAIAFPFTQTDDHYANIGVNILIFGTVALGLNIVVGLAG 294 Query: 65 LLSLNCVIAYAIGAYSYVILG-------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 LL L V +GAY+ ++ S L W A S G+++G P+L+ Sbjct: 295 LLDLGYVAFLGVGAYTAALVSGSEFSTISGVHLPFWASALAGAAASLVFGVLIGAPTLRL 354 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 RGDYLAI TL EIF+ + + G + L + + Sbjct: 355 RGDYLAIVTLGFGEIFRIAVNNMDGDSGPDVTNGPNGIPSIPDLNLFGFNFGQAHDIGGF 414 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + Y +++ + + + + I +W IR+++ A ++ KL AF Sbjct: 415 TLGRFANYYLLMVLIMAIVVLVYTRASDSRIGRSWIAIREDETAATAMGINGFRVKLIAF 474 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAI 290 A+ +A G+AG A + P ++F+ + +++ V+LGGM +++ A+ Sbjct: 475 ALGAALAGLAGTVSAHVTYSVVPTPYQFAGSTPPNSAFLLAAVVLGGMGTVAGPLLGAAL 534 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L + E + + IAL L++ R ++ R Sbjct: 535 LYLLPEKLVFLQD---------------KSLLAFGIALILLMRFRPEGIIANRRRQLEFH 579 Query: 351 R 351 Sbjct: 580 E 580 >gi|220916872|ref|YP_002492176.1| ABC transporter related [Anaeromyxobacter dehalogenans 2CP-1] gi|219954726|gb|ACL65110.1| ABC transporter related [Anaeromyxobacter dehalogenans 2CP-1] Length = 652 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 62/308 (20%), Positives = 119/308 (38%), Gaps = 16/308 (5%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 +L A V L + Y + + IY + GL + VG LG ++L Sbjct: 3 RRLLLVRGAEVVLFALLAAVPLAVHNPYALGLLTLLAIYGILLIGLDVTVGYLGQVNLAH 62 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +GAY+ I ++ GL + ++ ++ ++ G ++ LPSL+ G A+ATL Sbjct: 63 AAFLGLGAYTAGIAVTKLGLGLVPVLLLAPTVAFVIGALLALPSLRLEGPQFALATLSFL 122 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + L + + +T G G+ + + Y++ + + Sbjct: 123 ALTTTALNELEWLTAGAQGLSLDRPP----------------LLGHDLSPRDFYWLCMVL 166 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + L + A+ +RD+ A ++ K++AFA S G+AGA +A Sbjct: 167 LAAVWWAMRNLLSSQWGRAFEALRDSPIATDAMGVGTYRHKVAAFAFGSGLGGLAGALYA 226 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + + P F + I ++ V+LGG SL ++ + L + S L Sbjct: 227 FNFEYLQPQSFVYELTITLLLGVVLGGRKSLWGAFVGATLVALLPNLLSNRVLFQVFSGL 286 Query: 311 KFDCSFNM 318 + Sbjct: 287 GLAVALVA 294 >gi|320449660|ref|YP_004201756.1| branched-chain amino acid ABC transporter permease [Thermus scotoductus SA-01] gi|320149829|gb|ADW21207.1| branched-chain amino acid ABC transporter, permease protein [Thermus scotoductus SA-01] Length = 355 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 126/310 (40%), Gaps = 16/310 (5%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + IL+Y + GL+I G GL+++ +GAY+ +L + Sbjct: 42 PQFLSRTQVFILDLILVYSIAVLGLNITTGYAGLINIGQAAFMGVGAYTAALLAPQGLP- 100 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 WL++P+ +++ G ++G+PSL+ + YLA+ATL +F+ + + G A Sbjct: 101 FWLVVPLGGLVAAFFGFLVGIPSLRVKHLYLALATLAFQVVFEWTVGHMPLLKQGGAMDM 160 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 R+ F+ YYV L + L A L RT A Sbjct: 161 PRASFLGYEAGFRNHFHFW-------------YYVSLVVLVLLAVFFRNLLRTRYGRALM 207 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RDN +A ++ KL AFA+ + + G+AG +A + + + F+ +I +++ Sbjct: 208 AVRDNDRAADAMGMDPGRTKLFAFALGAFYAGVAGVLYAYLSRAVVIEDYTFAVSIKLLA 267 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYY--FNSLLKFDCSFNMRHTTLMVIALF 329 + I+GG+ +L A L + ++ + + + + Sbjct: 268 MAIVGGLGTLVGSFLGPAFLELLDVNMEALSNLIKALGFSMAGVDVASALRPLAFGLIIV 327 Query: 330 LVILMRSHSL 339 L ++ L Sbjct: 328 LFLMFEPRGL 337 >gi|225159233|ref|ZP_03725535.1| UreA ABC transporter, permease protein UrtB [Opitutaceae bacterium TAV2] gi|224802180|gb|EEG20450.1| UreA ABC transporter, permease protein UrtB [Opitutaceae bacterium TAV2] Length = 591 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 97/306 (31%), Gaps = 17/306 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAM 101 + ++ A GL+I G +G++++ +GAY+ + + + + Sbjct: 301 LSLSSVLLVTALGLAITYGLMGIINMAHGEIMVVGAYATYVTQNLFSGWFGADSAGYNYY 360 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 A +L +I + +++L W + G + Sbjct: 361 FLAALPAAFLAAALVGLVLERSIIQWLYRRPLESLLATWGVSLALQQGFRTIFGPANVQI 420 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + +R + + + +V+ + A L + RT R + N+ Sbjct: 421 NSPAWLRGN-IEFADITFTYNRIFVIAFAVVVVAGAWLLINRTRFGLYIRAVTQNRAMAS 479 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 + + FA S G+AGA A + S + +V+ GG+ SL Sbjct: 480 CMGVRTERVNMLTFAFGSGLAGLAGACLAQIGNV--GPGLGQSHIVDCFMVVVSGGVGSL 537 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + A + + ++ L+++A+ L + + L Sbjct: 538 AGTVYAALGIGSIDQILQPFLGAVMGK-------------ILVLVAIILFLQWKPGGLFP 584 Query: 342 LRTPSN 347 R S Sbjct: 585 TRNRSL 590 >gi|116252589|ref|YP_768427.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257237|emb|CAK08332.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 337 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 72/323 (22%), Positives = 131/323 (40%), Gaps = 19/323 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ + L L Y+ + LIY + A GL++ +G G +SL A+GA Sbjct: 9 LLIAVGIALLALAPIGHGNYVALILCSWLIYTIAAMGLNLTLGYAGQISLAQASFMAVGA 68 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y ++ + + +PVS G+++G P+L+ +G +LA TL + + +L Sbjct: 69 YITALMTMNGIHWL-IAMPVSVAACFVIGLLVGFPALRVKGHFLAFVTLAFNTLLVLVLR 127 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G G R V S + MYY+ L + + A ++ Sbjct: 128 NEDWLTGGSYGKSNMPRP---DFWVFDTGMKSTVLSIPLTSNQKMYYLCLVVFVIFALLM 184 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ A++ +R+N SL I L AFA+ SA G+AG+ + I P Sbjct: 185 YGLVRSPWGRAFKGLRENPIRAESLGLDIRRITLLAFAIGSAAGGLAGSLVSPVVQYIEP 244 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F S ++ ++ +V++GG A++I + E YY Sbjct: 245 NSFALSFSLKILLMVVVGGSGYFFGPMLGAAVVILLPEFLRFTEGYY------------- 291 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + + L+++ L+ Sbjct: 292 --LIIYSALVILLMVFSPSGLMG 312 >gi|39934306|ref|NP_946582.1| ABC transporter permease [Rhodopseudomonas palustris CGA009] gi|39648154|emb|CAE26674.1| possible ABC transporter, permease protein [Rhodopseudomonas palustris CGA009] Length = 381 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 78/306 (25%), Positives = 135/306 (44%), Gaps = 17/306 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ L + + Y S + +LIY + ++++ G G +S+ AI Sbjct: 21 AAFWYAVLVAALIVAPYVLESYYLSQLVFVLIYAIVGIAMNVLSGQAGQVSIGHAAFMAI 80 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAYS + +YGL + + + ++ +G G ++GLP+L+ G YLAIATL + I + I Sbjct: 81 GAYSAAV-AEKYGLPLPVYLVLAGGFTGLIGYLVGLPALRLHGIYLAIATLAFAFIVEEI 139 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + +W+ +TNG G+ + + YY+ LG+ + Sbjct: 140 VTRWESVTNGNEGLMLGAPS----------------LFGLKLGAQGFYYLCLGVTVVVIL 183 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + R+ A+ IRD++ A S+ K AFA+S+AF G+AG +A I Sbjct: 184 AAINILRSPTGRAFLAIRDSETAARSMGIDTARYKTRAFAISAAFTGLAGVLYAHKLSFI 243 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP+MF S +I + I+I+GG+ SL +I V + + L Sbjct: 244 SPEMFSLSMSIEFVMIIIIGGVLSLRGAVFGAIFMIMVDPILIVVKDKVPQLTLGAMQGV 303 Query: 317 NMRHTT 322 + Sbjct: 304 GLSDQL 309 >gi|149913165|ref|ZP_01901699.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. AzwK-3b] gi|149813571|gb|EDM73397.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. AzwK-3b] Length = 358 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++ L L+A F + + +++++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRMRYYLVLIA------AFAVVPFVINDYWVNAVFLPFLIYSIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ +SI + I +S ++ ++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTGFPEVSILIHIILSGGVTAGVCLLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N A + + Sbjct: 134 AVATLAAQFFLVWMFNRVSWFYNYSASGQITAPETQ---------VLGVAVTGPQTEPWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L C A + L R W IRD A + + AKLSAFA+S F+ Sbjct: 185 AYLFCLVFCVACALLARNLTRGMAGRKWMAIRDMDIAAEIIGVNPLKAKLSAFAISGFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA F A + F ++ +V+ +VI+GG+ S+ A L+ + L Sbjct: 245 GIAGALFFAVYLGAVEVGEAFGIQKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVLLKN 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L ++ + L ++ H L +L Sbjct: 305 ---TLVGGLGWPTDLAAHLEFMIVGGLIVLFLIAEPHGLAQLWR 345 >gi|227820404|ref|YP_002824375.1| urea or short-chain amide ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339403|gb|ACP23622.1| probable urea or short-chain amide ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 543 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 94/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S L S I+ ++ Sbjct: 264 AAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQEVVRDSYPALFDWSLAIALPLAFLVT 323 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + S Sbjct: 324 GAVGLAMER--GVIRFLYGRPLETLLATWGISLILQQSVRSIFGPTNREVGNPSW-MSGA 380 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + +++L + A+++ L++T + R + N++ S+ + Sbjct: 381 FELGGLTVTWNRLWIVLFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSMGIRTPWVD 440 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S GMAG A S+ I +V+ GG+ +L L Sbjct: 441 ALTFALGSGIAGMAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFSL 498 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L+++ + L I R L L+ + Sbjct: 499 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 542 >gi|90423173|ref|YP_531543.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90105187|gb|ABD87224.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 326 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 131/327 (40%), Gaps = 24/327 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL + + Y+ ++ + L+Y + +I+ G G +SL + + + Sbjct: 13 LLLAAGFTAVAALVPLFVKDVYVQNIMVLTLMYAALSQSWNILGGYCGQISLGHALYFGL 72 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L +++G+ W + +IS M +G P + RG Y IAT++++EI + Sbjct: 73 GAYTTALLFTKFGVLPWFGMISGGLISAVIAMALGYPCFRLRGHYFVIATIVIAEIAYLL 132 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + W + + ++ +Y LG C ++ Sbjct: 133 FLNWDWAGAALGIDIPVRKDSWTTFQFTR-------------SKLPYFYFALGFCVVAWL 179 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + WL+ + WR ++DN A SL + +K+ A AVS+ + G+F+A I Sbjct: 180 VTFWLQDSKWGYWWRAVKDNPDAAESLGVVVFNSKMGAAAVSAFLTAVGGSFYAQFVSYI 239 Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P+ F ++++ +LGG+ +L ILI + EL + Sbjct: 240 DPESVMSFHFSLLMALPAVLGGIGTLWGPVLGAVILIPLTELTRSFIGGSGRGV------ 293 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L+ L R L+ L Sbjct: 294 ----DLIVYGTLIVLIALARPEGLIGL 316 >gi|255523333|ref|ZP_05390303.1| inner-membrane translocator [Clostridium carboxidivorans P7] gi|255512987|gb|EET89257.1| inner-membrane translocator [Clostridium carboxidivorans P7] Length = 303 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 79/309 (25%), Positives = 140/309 (45%), Gaps = 31/309 (10%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y ++ + IYV+ GL++ G G +SL YAIGAY+ IL ++G SIW Sbjct: 6 IFNSYFINILVVAGIYVILTLGLNLTTGFAGQVSLGHAAFYAIGAYTAAILSVKFGCSIW 65 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +P+SA+++ G I+GLPSL+ + D+LA+ T+ + I Q++++ IT G GI Sbjct: 66 ITLPISALVTWIIGAILGLPSLRVKEDFLAVVTMGLGLIIQSLMLNL-KITGGPMGIGNI 124 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + LG + + L + + + + + A I Sbjct: 125 KPVSILGHNFSMFN---------------FFILELVIIVILTFTMNRMVNSRFGRALIAI 169 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+++ +L K+ AFA+ + + G+AG FA +SPD F F+E+ I++S+V Sbjct: 170 REDETVADTLGINTTKYKVLAFAIGAMYAGIAGTLFAHYFTYVSPDSFGFTESSIILSMV 229 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++GG+ S+ IL EL G+ Y + + + +++ Sbjct: 230 VIGGLGSIKGSIIGAVILSIAPELLRGLKDY---------------RILIYGLLMVIMMR 274 Query: 334 MRSHSLLRL 342 R L Sbjct: 275 YRPQGLFGE 283 >gi|312141342|ref|YP_004008678.1| branched-chain amino acid ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|325673818|ref|ZP_08153508.1| amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Rhodococcus equi ATCC 33707] gi|311890681|emb|CBH50000.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Rhodococcus equi 103S] gi|325555083|gb|EGD24755.1| amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Rhodococcus equi ATCC 33707] Length = 607 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 117/296 (39%), Gaps = 17/296 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + A+V+ +F F I + GL++ +G G L+L YA Sbjct: 14 IFALVFGAAVF-FAPMLGMDATNTRQLQLACILALVVSGLNLSLGYAGELALGQAAMYAA 72 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L I L + + ++ G+I G+P L+ LA+ + + + +I Sbjct: 73 GAYTAGLLSQAGHTEILLQLVAAGAVALLVGIITGIPGLRLGSWSLAMTSFFLILLVPDI 132 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L + T G+ G+ + G + YY+++G+ L Sbjct: 133 LAIFGGNTGGRNGLSGMEPPTLFGQDIDKD----------------FYYLVVGVTILWFV 176 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ L + A+RT++ + S ++ KL +A+ + G+AGA FA + I Sbjct: 177 VMRNLVVSRHGIAFRTLKQSPVLAQSQGVSVYRMKLLGYAIGALPAGLAGALFANTDLFI 236 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 SP+ F F+ V++ ILGG S+ AI+ Y F Sbjct: 237 SPEAFGFTFATAVLAASILGGSASVYGAVIGAAIMQFGPNQSTAFQEYSLLFYGGF 292 >gi|163854247|ref|YP_001642290.1| ABC transporter related [Methylobacterium extorquens PA1] gi|163665852|gb|ABY33219.1| ABC transporter related [Methylobacterium extorquens PA1] Length = 823 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 136/333 (40%), Gaps = 31/333 (9%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + + L L + Y + + + V+ GL++++G GL+S Sbjct: 3 SPLRAPAAMPLAILALTLAGLGLVAATSGYSHFVIALVALTVVAGTGLNVLLGLAGLISF 62 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 YA+GAY+ IL + WL +P +A +S G + +P+++ RG YLA+ T+ Sbjct: 63 GHAGFYALGAYASAILTLKGVS-FWLALPAAAGLSALVGAALAVPAMRVRGPYLAMVTIA 121 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + ++ LI+ +T G+ G+ VA G + + ++ + Sbjct: 122 FGFLVEHALIEGGELTGGQNGLVVATGPSLFGLPLGERD---------------LAWLAV 166 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 LS LR + A R +RD A SL + K +AFA+S+A G+AGA Sbjct: 167 IGAGLSLYGFHRLRHARLGQALRAVRDADVAAASLGYDPVRVKTAAFAISAALTGLAGAV 226 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 I+P F F+++I+ + V++GG ++ + + + E G+ Y Sbjct: 227 LPPLMLFIAPSSFPFTQSILFVLAVVVGGAGTVLGPLFGALVTVLLPEALAGLAEY---- 282 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +V+ + ++ Sbjct: 283 -----------RLLFFGLTTLVVLWLVPAGIVG 304 >gi|71908848|ref|YP_286435.1| inner-membrane translocator:ABC transporter related [Dechloromonas aromatica RCB] gi|71848469|gb|AAZ47965.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Dechloromonas aromatica RCB] Length = 597 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 110/320 (34%), Gaps = 22/320 (6%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 F Y ++G I +Y + A GL ++ G GL S +GAY+ Sbjct: 11 LMFGWFFLFPFLPVPGYWITIGNYIGLYSIVALGLVLLTGIGGLTSFGQAAFVGLGAYTT 70 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 L + G S W+ + ++SG ++G +++ G +L +AT+ + + Sbjct: 71 AYLSTTLGWSPWIGLGAGLVVSGLAAGLIGSITVRLSGHFLPLATIAWGLSLYYLFGTLE 130 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + G+ L G + S MY ++ ++L L Sbjct: 131 FL-GKYDGLSGIPPLSLFGLDLSS--------------PRVMYGMIWFCLGGCLWLVLNL 175 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + A R + + ++ K+ F +++ ++G +A + +S F Sbjct: 176 LNSRPGRAIRALAKGKTMPEAMGINTAQYKILIFVLAALMASLSGWLYAHLQRSVSATPF 235 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + I + + ++GG+ + ++ G+ S F Sbjct: 236 GLNMGIEYLFMAVVGGVGHVWGAILGAVVMTGLKSQLQDWLPLLLGSNGNF-------EI 288 Query: 322 TLMVIALFLVILMRSHSLLR 341 + + + L++L L Sbjct: 289 VVFGVMIVLLLLWSRDGLWP 308 >gi|328950816|ref|YP_004368151.1| ABC-type transporter, integral membrane subunit [Marinithermus hydrothermalis DSM 14884] gi|328451140|gb|AEB12041.1| ABC-type transporter, integral membrane subunit [Marinithermus hydrothermalis DSM 14884] Length = 354 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 74/322 (22%), Positives = 138/322 (42%), Gaps = 17/322 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 ++ L+ L + ++ ++ I+IY + GL+I G GL+++ +GAY+ Sbjct: 31 LWVLIAALLVLPRFLERSQMAVVDLIVIYAIAVLGLNITTGYAGLINIGQAAFMGVGAYT 90 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 ++ L WL +PV +++ G+I+G+PSL+ + YLAIATL IF+ I+ Sbjct: 91 AALVA--PYLPFWLTLPVGGLVAAVAGVIVGIPSLRIKHLYLAIATLAFQLIFEWIV--- 145 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + L G + F + F + F YYV L + L A Sbjct: 146 ----------GHSPALEQGGAIAMPRVTFLGYAVGFRNHHFFWYYVALVVLVLLAFAFRN 195 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L RT A +RDN +A ++ KL AF + + + G+AGA FA + + Sbjct: 196 LLRTRYGRALVAVRDNDRAADAMGMDPGRTKLFAFGLGAFYAGVAGALFAYWSRAVVIED 255 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY--FNSLLKFDCSFNM 318 + S +I ++++ I+GG+ + A L+ + ++ + F + Sbjct: 256 YMLSTSIELLAMAIVGGLGTFVGSFLGPAFLVLLDINVETLSEWIKSFGITPAGIDVASG 315 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 + + + L ++ L Sbjct: 316 LRPLVFGLVIVLFLIFEPRGLA 337 >gi|94986266|ref|YP_605630.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300] gi|94556547|gb|ABF46461.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Deinococcus geothermalis DSM 11300] Length = 325 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 28/331 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + +L L K Y+ + I +I+ M A+GL++++G GLLSL + IGAY Sbjct: 11 WLAVFVLAALLPLVKPGTYVLDLAINTMIWAMLAYGLNVMLGYTGLLSLAHAGFFGIGAY 70 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + IL + G S WL P + ++ G+++GL + + RGD AI TL + I Q ++ K Sbjct: 71 AVGILTLKAGWSFWLAWPAAVLLCALGGLLLGLVAFRTRGDAFAIFTLGVGVIIQLVINK 130 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T G G+ F YY+ L L+ ++ Sbjct: 131 WDALTGGNEGLNGVPPAS-------------SFLGLDFSKAANFYYIALAALILTVMVVA 177 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 R + + IR + S + KL A +S+A G+AG +AA + Sbjct: 178 RTRGSVFGRSLVAIRGGEDLARSAGIDVYSHKLRAMMLSTAIAGLAGGVYAAYVGFLGSA 237 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + V+ +++GG+ +L+ TA+L + + G+ Y Sbjct: 238 VTGPTTTFTVLLYLLVGGVGTLAGPLLGTALLYVLTQSLQGLQDY--------------- 282 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + L L++L L+ L S Sbjct: 283 RFLVFGPLLVLLVLFAPQGLVGLWDRSRLRR 313 >gi|197122104|ref|YP_002134055.1| ABC transporter [Anaeromyxobacter sp. K] gi|196171953|gb|ACG72926.1| ABC transporter-related protein [Anaeromyxobacter sp. K] Length = 652 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 63/308 (20%), Positives = 119/308 (38%), Gaps = 16/308 (5%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 +L A V L + Y + + IY + GL + VG LG ++L Sbjct: 3 RRLLLVRGAEVVLFALLAAVPLAVHNPYALGLLTLLAIYGILLIGLDVTVGYLGQVNLAH 62 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +GAY+ I ++ GL + ++ ++ I+ G ++ LPSL+ G A+ATL Sbjct: 63 AAFLGLGAYTAGIAVTKLGLGLVPVLLLAPTIAFVIGALLALPSLRLEGPQFALATLSFL 122 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + L + + +T G G+ + + Y++ + + Sbjct: 123 ALTTTALNELEWLTAGAQGLSLDRPP----------------LLGHDLSPRDFYWLCMVL 166 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + L + A+ +RD+ A ++ K++AFA S G+AGA +A Sbjct: 167 LAAVWWAMRNLLSSQWGRAFEALRDSPIATDAMGVGTYRHKVAAFAFGSGLGGLAGALYA 226 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + + P F + I ++ V+LGG SL ++ + L + S L Sbjct: 227 FNFEYLQPQSFVYELTITLLLGVVLGGRKSLWGAFVGATLVALLPNLLSNRVLFQVFSGL 286 Query: 311 KFDCSFNM 318 + Sbjct: 287 GLAVALAA 294 >gi|260467380|ref|ZP_05813552.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259028840|gb|EEW30144.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 320 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 87/330 (26%), Positives = 151/330 (45%), Gaps = 30/330 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 ++ L + + Y+ + L+YV+ GL+IVVG GLL L + Sbjct: 20 WSVVLPGLAALAVALVLPQFANAYVTEVATTALLYVVLCLGLNIVVGYAGLLDLGYAAFF 79 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAY+ IL + +G + WL IPV+ + G+I+G P+L+ R DYLAI TL EI + Sbjct: 80 AVGAYTSGILTAEFGFNFWLTIPVAMAAACVAGIIIGAPTLRLRSDYLAIVTLGFGEIVR 139 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I IT G +G+ +R G + + F YY L + L+ Sbjct: 140 IIARNL-DITGGASGLIGIERPEIFGFRLMQVQHF--------------YYAFLVLALLT 184 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + L + R+ + AW +R ++ A + + AKL A+ + + +AG +AA Sbjct: 185 AFVCLSVERSRMGRAWFYVRYDEDAAAGIGINRVTAKLQAYMMGAVIASVAGCLYAAKMT 244 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISP+ F F+++++++ V+LGGM + + ++ + E+ G Y Sbjct: 245 AISPESFTFNQSLLILLGVVLGGMGRIPGVVLGAILVALLPEVLRGAGTY---------- 294 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + +AL ++L R + L + Sbjct: 295 -----RPLVTAVALLAIMLFRPNGLWPDKR 319 >gi|282857290|ref|ZP_06266528.1| inner-membrane translocator [Pyramidobacter piscolens W5455] gi|282584870|gb|EFB90200.1| inner-membrane translocator [Pyramidobacter piscolens W5455] Length = 370 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 122/350 (34%), Gaps = 10/350 (2%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + I L+ V + +F+ + + ++ + +Y + A ++++ G G+ SL Sbjct: 11 NIISALIIVAIYVAVFVAEQCLPPRSMLFTVLKKGAVYALVAVSMNLLNGFTGIFSLGQA 70 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS- 130 IGAY Y I + I L L + + Sbjct: 71 GFMLIGAYVYCIFTIPIVSRPIVYQYFGGGIIQFTLPWFVAMFLAGLAAALFAWLIGLPV 130 Query: 131 -----EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + + I + +R F F + +Y Sbjct: 131 LRLKSDYLAIATLGFAEIIRAIFQWNQLGPITNGSNMLRLFTIFTDFNIMNPDGTVSVYL 190 Query: 186 ---VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 V + + ++++ L + A R I+DN+ A ++ + K AF +SS F Sbjct: 191 ATTVPMLIAGFCIALLVLLINSTYGRALRAIKDNEIAAEAMGINLASHKQLAFCISSFFT 250 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE-LCCGM 301 G++GA A + + F + ++ IV++GG+ S++ ++ + + E + Sbjct: 251 GISGAMLAMYQTSVQAKSFTSAMTYEILLIVVIGGVGSVTGSCLSSFLFVACSEWWLRFL 310 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + N + I + +V+L ++ + + R Sbjct: 311 DEKQVVNGFEVPLLRNGFRLVVFSIIIMIVVLFFRRGIMGTKELPDLFRR 360 >gi|313112593|ref|ZP_07798252.1| amino acid or sugar ABC transport system, permease protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310625089|gb|EFQ08385.1| amino acid or sugar ABC transport system, permease protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 351 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 123/326 (37%), Gaps = 24/326 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + + +F + + YI ++ + + +I+ G G SL Sbjct: 14 LAIVLAIIVAIFAAIPLVVDKPYIINIFVLTFYMSTLSMAWNILGGITGQNSLGLAAYMG 73 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY ++ ++ G++ W+ + ++ G ++ PSL RG Y + ++ +E + Sbjct: 74 LGAYVCCLVVTKTGMNPWVAAVLDMLVVGVVAGVIFFPSLILRGPYFTLVSIAFAESIRQ 133 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +I + + F S ++ YY+ M Sbjct: 134 FIINSEFFGRASGVGLPFGKDSFAQFRFTS--------------KVPYYYIGFIMMVGVY 179 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I+ + R+ + A RTIR+++ A ++ K+ A +S+ G+ G F+ + Sbjct: 180 LIMKKIGRSKLGFALRTIREDEDAAAAIGINPTKYKVIAVVISAIIAGLVGFFYVSYIRY 239 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I PD+ S++ ++ ++GG + I+I + EL F Sbjct: 240 IDPDIMIQSKSTEIVLPAVVGGAAYIEGPLIGGLIMIPLSELLRA----------NFAAI 289 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + I L +VI R +L Sbjct: 290 LPGINMLMYAIVLIVVIRFRPSGILG 315 >gi|154246644|ref|YP_001417602.1| ABC transporter related [Xanthobacter autotrophicus Py2] gi|154160729|gb|ABS67945.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 842 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 110/340 (32%), Gaps = 34/340 (10%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +L + ++L + + QI IY ++ G+++++G GL+ Sbjct: 4 RAVLLHPVLWTAVVLGALSALWLALGAPIQLVTQIAIYALYGAGVNLLIGYTGLVPFGAS 63 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + +Y+ G + + +S + + G+ +G L+ +G Y ++ TL S+ Sbjct: 64 VFFGCTSYAAAYFILGLGGNEIGALGLSMVFAAVLGLGIGAVILRRKGLYFSLLTLACSQ 123 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I I KW +T G+ GI R + + ++ Sbjct: 124 IAFEIAFKWTSVTGGENGIQGVPRPLME-------------------SPLTFHVFVVATV 164 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ L + +RDN SL + +L F + + +G AGA Sbjct: 165 VGVMWLLWRLAHAPFGRVLQAVRDNDVRAASLGYDVYRVRLVGFTLCAVVVGYAGALLTF 224 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + + + + + +LGG+ I + + ++ Sbjct: 225 LLQGVYANNLGWQHAGDSLLMTVLGGVHHFLGPLWGAITFIVLENRLSAITENWW----- 279 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + L L+ + L ER Sbjct: 280 ----------LIFAPLLIAFALVSPEGIQGLVQRLFRCER 309 >gi|218533210|ref|YP_002424026.1| ABC transporter [Methylobacterium chloromethanicum CM4] gi|218525513|gb|ACK86098.1| ABC transporter related [Methylobacterium chloromethanicum CM4] Length = 823 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 71/330 (21%), Positives = 135/330 (40%), Gaps = 31/330 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + L L + Y + + + V+ GL++++G GL+S Sbjct: 6 RAPAAMPLAILALTLAGLGLVAATSGYSHFVIALVALTVVAGTGLNVLLGLAGLISFGHA 65 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 YA+GAY+ IL + WL +P +A +S G + +P+++ RG YLA+ T+ Sbjct: 66 GFYALGAYASAILTLKGVS-FWLALPAAAGLSALVGAALAVPAMRVRGPYLAMVTIAFGF 124 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + ++ LI+ +T G+ G+ VA G + + ++ + Sbjct: 125 LIEHALIEGGELTGGQNGLVVATGPSLFGLPLGERD---------------LAWLAVISA 169 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 LS LR + A R +RD A SL + K +AFA+S+A G+AGA Sbjct: 170 GLSLYSFHRLRHARLGQALRAVRDADVAAASLGFDPVRVKTAAFAISAALTGLAGAVLPP 229 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 I+P F F+++I+ + V++GG ++ + + + E G+ Y Sbjct: 230 LMLFIAPSSFPFTQSILFVLAVVVGGAGTVLGPLFGALVTVLLPEALAGLAEY------- 282 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +V+ + ++ Sbjct: 283 --------RLLFFGLNTLVVLWLVPAGIVG 304 >gi|119716377|ref|YP_923342.1| ABC transporter related [Nocardioides sp. JS614] gi|119537038|gb|ABL81655.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Nocardioides sp. JS614] Length = 606 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 63/322 (19%), Positives = 117/322 (36%), Gaps = 29/322 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ + +F L A+ Y + ++Y + G+ + +G G LSL V A+GAY Sbjct: 15 VLIAIAVFALLVASLGDSYRTGILSLAVVYGIALVGMHVQIGYAGELSLGAVAFMAVGAY 74 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +L + + ++ I VS +IS +I+G L+ LA+ TL M I + ++ Sbjct: 75 GSGVLTTEHDMNPLAAIGVSLLISLGAALIIGSLCLRISELTLALVTLFMVIIVEQLVSH 134 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 G GI + L G + S + + + Sbjct: 135 LDAF-GGTFGISGIEPLEVFGYSFESRTQ--------------QAVLAGVVLLAVWLFAR 179 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + R + + SL + +L F + +AG+ FA +R +SPD Sbjct: 180 YRLRALTGLEVVALSHDATMAESLGVAVRRRRLEVFVFGALVACLAGSVFAHTRLYVSPD 239 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F ++ ++ +GG+ L IL + ++ + Y Sbjct: 240 QFGPGLIFELLLMMYIGGLRFLLGGFLGALILGFLPDIAISLQDYLL------------- 286 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 V+ L + L+R L+ Sbjct: 287 -IIEGVLFLAIFALVRDRGLIG 307 >gi|260425527|ref|ZP_05779507.1| extracellular ligand-binding receptor [Citreicella sp. SE45] gi|260423467|gb|EEX16717.1| extracellular ligand-binding receptor [Citreicella sp. SE45] Length = 695 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 104/317 (32%), Gaps = 15/317 (4%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + + + ++ + A GL+++ G +GL++L Y +GA++ Sbjct: 390 MSPILLAEQVLNGLQSGVMLFLMAAGLTLIFGVMGLINLAHGALYMVGAFAAAT------ 443 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + + + + L I L + +L + I G Sbjct: 444 ----VAGLTGSFLLALVAALAAAAVAGALVETLVIRRLYARDHLDQVLATFALILIFSEG 499 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + L V + + Y ++ +++ ++ + RT + Sbjct: 500 TRWVFGSFPLYLDVPDALSGTVTLPGGIAYPLYRLALIVIGIAVALGLWWLNSRTRLGIR 559 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++++ L I FA+ + G+AGA A + I+ Sbjct: 560 IRAGENDREMIAVLGVDISKLYTLVFALGAGLAGLAGALVGAIQSV--QVGMGEPVLILA 617 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVI 326 ++++GG+ S+ ++ L + F + + + + + + Sbjct: 618 FVVIVIGGIGSIRGALIGALLVGLTDTLGGVLLPELFRLFIDPASAATAGSAFASMAIYV 677 Query: 327 ALFLVILMRSHSLLRLR 343 + V++ R L R Sbjct: 678 LMAAVLVWRPTGLFGGR 694 >gi|255505703|ref|ZP_05347656.3| high-affinity branched-chain amino acid transport protein [Bryantella formatexigens DSM 14469] gi|255266403|gb|EET59608.1| high-affinity branched-chain amino acid transport protein [Bryantella formatexigens DSM 14469] Length = 357 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 78/340 (22%), Positives = 147/340 (43%), Gaps = 28/340 (8%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + +K + I + +V +++ + I + + + +Y + A L++VVG G L Sbjct: 7 KTSKNNYITYAMVIVIFIVVQTLSATGNLSRLITGLLVPLCVYTIAAVSLNLVVGFSGEL 66 Query: 67 SLNCVIAYAIGAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 SL +GAYS + + + + L I V A ++ G+++G+P L+ RGD Sbjct: 67 SLGHAGFMCVGAYSSALFSNVFAETLPSVPRLILAILVGAAVAAVFGILIGIPVLRLRGD 126 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLAI TL EI LI + + G++VA L Sbjct: 127 YLAIVTLAFGEII-KNLINVLYVGVDENGLHVATSSAGLNLAAGGKQIMKGALGISGTAT 185 Query: 181 IF------MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 ++ + + + + ++ I+ L + A + RDN+ A S+ ++ KL A Sbjct: 186 LYKDIKDYFFPIGVVLILITLFIVQNLVNSRSGRAIMSTRDNRIAAESVGISVTKYKLMA 245 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F +S+A G+AG +A + + F ++ +I+++ V+LGG+ +L AT IL + Sbjct: 246 FTISAALAGVAGVLYAHNLSMLKVSTFDYNLSILILVYVVLGGIGNLRGSIIATIILYAL 305 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 EL G + Y + + L +++L Sbjct: 306 PELLRGFSNY---------------RMLIYAVVLIVMMLF 330 >gi|295109215|emb|CBL23168.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Ruminococcus obeum A2-162] Length = 356 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 78/339 (23%), Positives = 141/339 (41%), Gaps = 27/339 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + K + I + + +++ + G + + + + + +Y + A L++VVG G L Sbjct: 7 KTTKNNFINYGIVIAIFVIVEILSGTGNLSRLLTGLLVPLCVYTIAAISLNLVVGFSGEL 66 Query: 67 SLNCVIAYAIGAYSYVILGS-----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 SL +GAYS + L I + A+++ G+I+G+P L+ RGDY Sbjct: 67 SLGHAGFMCVGAYSSALFSHIASDIPQVPRFILAILIGAVVAAVFGVIIGIPVLRLRGDY 126 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI LI + + G++VA L + Sbjct: 127 LAIVTLAFGEII-KNLINILYVGFDENGLHVATSSANLKLAAGGKQILKGALGISGTGAL 185 Query: 182 F------MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + + + + L+ I+ L + A RDN+ A S+ + KL AF Sbjct: 186 YKDVKHYFFPIGIILVLLTLFIVQNLVNSRSGRAIMATRDNRIAAESVGIDVTKFKLLAF 245 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+A G+AG +A + + F ++ +I+++ V+LGG+ +L A IL + Sbjct: 246 TISAALAGVAGVLYAHNLSMLKVSGFDYNMSILILVYVVLGGIGNLRGSMIAAIILYALP 305 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 EL G Y + I L +++L Sbjct: 306 ELLRGFANY---------------RMLIYAIVLIVMMLF 329 >gi|157737051|ref|YP_001489734.1| urea/short-chain amide ABC transporter, permease protein [Arcobacter butzleri RM4018] gi|157698905|gb|ABV67065.1| urea/short-chain amide ABC transporter, permease protein [Arcobacter butzleri RM4018] Length = 534 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 94/306 (30%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 Q + ++ A GL+I G + ++++ IGAY+ + I I ++ Sbjct: 249 LSQGSVLLLAAIGLAITFGVMKVINMAHGELIMIGAYTTYTIQQLMPNLIEYSIIIAIPA 308 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + I+G+ + +L L + +L + + + Sbjct: 309 AFIVSAIVGILIERLVIRHLYGRPL------ETLLATFGISLILQQVVRTIFSPLNQEVK 362 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 S + +S + Y+++ + +++ +++T++ R + N+ + Sbjct: 363 TPSWMSGALEINSALSLTYNRLYIVIFALVVFLAVLFVMKKTSLGLKVRAVSQNRPIARA 422 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + S G+AG + + + + +V+ GG+ +L Sbjct: 423 MGIKSSYIDALTFGIGSGIAGVAGVALSQLTNV--GPNLGQAYIVDSFMVVVFGGVGNLW 480 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L + + ++ + L Sbjct: 481 GTLIAAFSLGEINKFIEPFAGAVLAKVIILVFIILFIQK-------------KPRGLFPQ 527 Query: 343 RTPSNF 348 + Sbjct: 528 KGRDVE 533 >gi|120555910|ref|YP_960261.1| inner-membrane translocator [Marinobacter aquaeolei VT8] gi|120325759|gb|ABM20074.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Marinobacter aquaeolei VT8] Length = 534 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 100/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+I G +G++++ +GAY+ + + L + +S Sbjct: 249 LSLGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWGMQQLFPGQPGLALILSIPA 308 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + G+ + YL L + +L + + + Sbjct: 309 GFLVAALAGIAIERSVIQYLKGRPL------ETLLATFGISLILQQLVRTVISPLNRTVV 362 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + YV+ + A ++L +R+T + R + N+ S Sbjct: 363 TPEWMSGSIMVNEALSLTLNRLYVIGFALVVFAGLMLIMRKTRLGLEVRAVTQNRAMARS 422 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + FA+ S G+AG A S+ + I +V+ GG+ +L Sbjct: 423 MGIKATKVDIMTFALGSGVAGLAGV--ALSQITNVGPNLGQNYIIDSFMVVVFGGVGNLW 480 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L + +L ++++ + L I R L Sbjct: 481 GTLIAGLSLGTINQLLEPWAGAVLAK-------------IMVLVLIILFIQKRPRGLFPQ 527 Query: 343 RTPSNF 348 + + Sbjct: 528 KGRAAE 533 >gi|121535943|ref|ZP_01667738.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1] gi|121305471|gb|EAX46418.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1] Length = 342 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 123/326 (37%), Gaps = 18/326 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ ++ L F+ Y + L Y + L+ V G +G SL + Sbjct: 28 AVILLITFLDSFIDAPDYIFSPYFKHIIFVSLTYSIVTLSLNFVSGYVGQTSLGHAAFFG 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +G Y +L Y + W + +++ G+ +G P+L+ +G +L + T E+F+ Sbjct: 88 LGGYVSALLTQLYHVPYWPAFLAAGVVAALVGIPLGAPALRVKGPFLVVVTYACGEVFRF 147 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I + + L V I F + L A Sbjct: 148 IALNLEVTGG----------PAGLPGLVTPSIAGVSFTDVGATGKELFIVTALVFALALA 197 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L + I +A+ IR+++ A ++ + KL AF + + F G+AG+ F Sbjct: 198 FFMSRLEDSRIGHAFAAIREDEIAAAAMGINTAYYKLLAFCLGAFFAGLAGSLFVHYLSF 257 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +SPDM +E+I++ ++V++GG S+ +L + E F Sbjct: 258 VSPDMLSSTESIMMFTMVVVGGARSIPGSFLGAFLLTFIPEGLRYFKD--------FVHL 309 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 L +++ +R +L Sbjct: 310 PFDPWLVFFGFVLMVMMRVRPQGILG 335 >gi|86139335|ref|ZP_01057904.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] gi|85823838|gb|EAQ44044.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] Length = 358 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 80/344 (23%), Positives = 144/344 (41%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y L L L+ FL + T + + ++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYLVL------LIAFLVIPFTINDYWASAILLPFLIYSIAAIGLNILVGYA 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ + ++ I+ ++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFVHVMLAGGITALVCVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWVFNRVPWFYNYS---------ASGQINAPERDVFGIVITGPNAPAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L + A I L R + +W IRD A + + AKL+AFAVS FI Sbjct: 185 TYLFCLIFLTICAVIARNLTRGTVGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSGFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F +++ V+ +VI+GG+ S+ A L+ + + Sbjct: 245 GISGALFFALYLGAVEVGEAFGITKSFQVLFMVIIGGLGSIFGSFAGAAFLVLLPVILKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + F ++ + L +++ H L +L Sbjct: 305 VGVDVLGWPTDIVAHF---QLVIVGALIVLFLIVEPHGLAQLWR 345 >gi|144898610|emb|CAM75474.1| inner-membrane translocator [Magnetospirillum gryphiswaldense MSR-1] Length = 318 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 56/323 (17%), Positives = 113/323 (34%), Gaps = 30/323 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ + L Y + I + + GL++++G G +SL + +GAY Sbjct: 15 LIVLAAVIAVLPLALRNDYHYDVVINAGLNAIVVVGLNLLIGYAGQISLGHAAFFGLGAY 74 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 IL + YG + + G ++ P L+ +G YLA+ATL + I +L Sbjct: 75 VSAILTTTYGWPALGAMAAGIAVVGILAYVIARPILRLKGHYLAMATLGIGVIISIVLNT 134 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 +T G G+ A T Y+++ G L+ + Sbjct: 135 EAQVTGGPDGMSAAPFTVLGYTFASEQSW---------------YWLVGGALLLTVWLST 179 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + I A R + + + K+ F +S+ F AG+ FA ++P Sbjct: 180 NLIDSPIGRALRALHGAEIGARVVGIDTTRYKVLIFVISAMFASFAGSLFAHHTPTVTPS 239 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + F +++ + + + GGM S+ I+ + + Sbjct: 240 ILGFIKSVEFVVMAVFGGMASVMGSVVGAVIMTLLPNALAAFEDF--------------- 284 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 ++ + ++ L+ Sbjct: 285 EPIILGGIMMGTMIFMPKGLVPT 307 >gi|284045419|ref|YP_003395759.1| inner-membrane translocator [Conexibacter woesei DSM 14684] gi|283949640|gb|ADB52384.1| inner-membrane translocator [Conexibacter woesei DSM 14684] Length = 322 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 135/323 (41%), Gaps = 7/323 (2%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 + A + ++ S+G+ IY + A GL + VG G+L+ AIGAY+ IL Sbjct: 5 FAVTFDAFANIEFWTSVGVLAGIYAIVALGLQLNVGFTGILNFGQAGFMAIGAYAMAILV 64 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + + +S WL +P++ + + A +++GL SL+ R DY AI T+ +E + + + +T Sbjct: 65 ADHDMSFWLALPIAVLATVAFALLVGLSSLRLRADYFAIVTIAAAEAVRLVASNARDLTG 124 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G G + + + V ++ V + + + L++T Sbjct: 125 GAQG-IGGFSADWDALSRSIEDFIVSLGWTDVPGLFPLFLVTWALVIVLTIGLTQLQKTP 183 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 R +R+++ A +L KL + A+S+ +AG A + + PD F+ + Sbjct: 184 WGRVLRAVREDEDAARALGKNAFAYKLQSLALSATIGAIAGFLVALNLKFVVPDAFQPTL 243 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + +I++LGG+ + A +L V+E + + ++ Sbjct: 244 TFLGFAILVLGGLANYYGAAVGAVLLFTVLEGLRFVELPITET------QVAALRFIVLG 297 Query: 326 IALFLVILMRSHSLLRLRTPSNF 348 + L ++ R L + Sbjct: 298 LLLIGLMAFRPQGLFGNKREMMI 320 >gi|237752244|ref|ZP_04582724.1| ABC transport system permease [Helicobacter winghamensis ATCC BAA-430] gi|229376486|gb|EEO26577.1| ABC transport system permease [Helicobacter winghamensis ATCC BAA-430] Length = 366 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 124/348 (35%), Gaps = 35/348 (10%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--- 84 +F T Y + ILI+V+ A +++ G G LSL AIGAY ++ Sbjct: 1 MFAAQTLLGDYALRIFNNILIFVILAVSYNLINGVTGQLSLEPNGFVAIGAYITALMLLD 60 Query: 85 ----------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + + S +++ +++ P + RGDYLAI TL Sbjct: 61 EDLKWSMFQLNDPHPFVLSMYSELLPALFCSGVVAAIIAVLLSFPVFRVRGDYLAIVTLG 120 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADR---------------LYFLGTTVRSLIRFFRFP 173 I + + I TNG G+ L + + Sbjct: 121 FGFIIKILAINNPQWTNGAIGLNEIPNNQDSVVRYIEQTLLSLSSGDSVLSGFFNLLYTH 180 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + I +++ S +IL + + A + +RD++ A ++ K Sbjct: 181 AFTGGANITVFFWSGIFATASVILILQIVYSKYGRAMKAVRDDEDAAIAMGINTFKIKTF 240 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF+ S+ G+ G A I P +F F ++ I++LGG+ S + ++IG Sbjct: 241 AFSTSAFLEGVGGGLMAVWLTTIDPKIFGFELTFQLLIIIVLGGLGSTTGAILGAILVIG 300 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 E ++ F S+ + L +++L ++ Sbjct: 301 GGEWLRFLDQPLVFFGADFG-SYPGLRMVFFSVILLIIMLFAREGIMG 347 >gi|55980419|ref|YP_143716.1| branched-chain amino acid ABC transporter permease [Thermus thermophilus HB8] gi|55771832|dbj|BAD70273.1| branched-chain amino acid ABC transporter, permease protein [Thermus thermophilus HB8] Length = 355 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 68/310 (21%), Positives = 125/310 (40%), Gaps = 16/310 (5%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + IL+Y + GL+I G GL+++ +GAY+ +L GL Sbjct: 42 PQFLSRTQVFILDLILVYSIAVLGLNITTGYAGLINIGQAAFMGVGAYTAALLA-PAGLP 100 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 +L++P + + G ++G+PSL+ + YLA+ATL +F+ + + G A Sbjct: 101 FYLVLPAAGLAGAFFGYLVGIPSLRVKHLYLAMATLAFQVVFEWTVGHLPLLNQGGAMPL 160 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 L R+ F+ YYV + L A L RT A Sbjct: 161 PRVSLLGYEVGFRNHYHFW-------------YYVSFAVLVLLALFFRNLLRTKYGRALV 207 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RDN +A ++ KL AFA+ + + G+AGA +A + + + FS +I +++ Sbjct: 208 AVRDNDRAADAMGMDPGRTKLFAFALGAFYAGVAGALYAYLSRAVVIEDYTFSVSIKLLA 267 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC--SFNMRHTTLMVIALF 329 + I+GG+ +L A L + ++ + + + Sbjct: 268 MAIVGGLGTLVGSFLGPAFLELLDVNMEALSNLIKALGFSVAGVDVASALRPLAFGLVIV 327 Query: 330 LVILMRSHSL 339 L ++ L Sbjct: 328 LFLVFEPRGL 337 >gi|39937104|ref|NP_949380.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] gi|39650962|emb|CAE29485.1| putative branched-chain amino acid transport system permease protein [Rhodopseudomonas palustris CGA009] Length = 357 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 73/343 (21%), Positives = 156/343 (45%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF R ++ +L ++ V + Y S+ IQI I+ + A GL+I+VG Sbjct: 21 TIFPTRTSRNAAMLGIVLVCFA--------PLVLSGYWLSILIQIGIFGIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +S+ + +GAY+ L + + + ++ IP++ +++ G++ G+P+ + +G Y Sbjct: 73 FTGQISIGHAAFFLLGAYTSAYLNNHFPIPVFFAIPLAGLVTALVGLVFGVPAARLKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L IATL I + + + + G V ++ F + + Sbjct: 133 LVIATLAAQYILIDFFSRAEWFSGGS---------------VPAMANPFSLFGYVLQGDK 177 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +YV+L +S ++ L RT A +RD+ + + + + +FA+++ F Sbjct: 178 QYFYVVLAYLLVSYILVTNLIRTRDGRALVAVRDHYLSAEIMGINLTKYRTLSFALAAFF 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE----L 297 G+AGA +A + +S + F +I+ ++++I+GG+ S+S TA ++ + E L Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPETMEWL 297 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 G+ + L+ + + + + + L ++ L Sbjct: 298 SSGLKGSAIDRALELNNNLTFLREIAIGLIIILFLVFEPDGLA 340 >gi|303246136|ref|ZP_07332417.1| urea ABC transporter, permease protein UrtB [Desulfovibrio fructosovorans JJ] gi|302492532|gb|EFL52403.1| urea ABC transporter, permease protein UrtB [Desulfovibrio fructosovorans JJ] Length = 538 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 87/301 (28%), Gaps = 17/301 (5%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 + ++ + GL+I G +G++++ +GAY+ ++ + + + + Sbjct: 252 LGSVLLLTSLGLAITFGLMGVINMAHGEMLMLGAYATYMVQQSFRAYFPGAVDYYLLAAI 311 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 + I + + +L W + + + Sbjct: 312 PFSFAVPFLVGMALER--CIIRFLYKRPLETLLATWGISLGLIQTVRLLFGAQNVEVQNP 369 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 S + S + +++ F+ L RT + R + ++ ++ Sbjct: 370 SWLSGGLEVVSGLTLTYNRLAIIVFTAFVVFLCWFLLNRTTLGLQVRAVTQDRDTAKAMG 429 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + FA+ S G+ G A ++ + +V+LGG+ L Sbjct: 430 IYTWKIDMWTFALGSGIAGLGG--LALTQVGNVGPELGQGYIVDSFMVVVLGGVGKLIGT 487 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L + + +++ + + I R L + Sbjct: 488 VVGALGLGVINKALEPFMGAVLGK-------------IIVLALVIVFIQKRPQGLFAFKG 534 Query: 345 P 345 Sbjct: 535 R 535 >gi|253575737|ref|ZP_04853072.1| high-affinity branched-chain amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251844780|gb|EES72793.1| high-affinity branched-chain amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 322 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 29/317 (9%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 + L + Y+ + I I I+ M + L++++G G +L Y IGAY+ +L Sbjct: 18 IVLPIVLQLVNDYLLHVVIMIGIFSMLSLSLNVIIGYAGQFALGHAAFYGIGAYAAALLM 77 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + LS W+ +P SA I+G G ++G P ++ RGDYL I TL EI + I + W +T Sbjct: 78 LHFHLSFWIALPASAAIAGLFGFLLGSPVIRLRGDYLGIVTLGFGEIVRLIFVGWVDLTR 137 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G G+ G R + F+ V+ +I L + Sbjct: 138 GPMGLPGIPAPSLFGFVFRDKLEFYYLILLLVLIT--------------YVVIHRLVHSG 183 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + + T+R+++ S+ + KL AF V F G AGAF+A +SPD F++ + Sbjct: 184 VGLSLLTVREDETLAQSVGIRPNYYKLMAFTVGGFFAGAAGAFWATYISYVSPDAFRYLD 243 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 ++ ++++VILGG SL IL+ E+ ++ Y L+ Sbjct: 244 SVNILAMVILGGAASLPGSVLGAVILVAAPEILRYVSDY---------------RMILLG 288 Query: 326 IALFLVILMRSHSLLRL 342 +A+ L+++ + Sbjct: 289 LAIVLMMIFKPSGFWGE 305 >gi|218781342|ref|YP_002432660.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218762726|gb|ACL05192.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 358 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 79/340 (23%), Positives = 140/340 (41%), Gaps = 24/340 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +L + + LLLF F+ + + Y + I + ++ A GL+++VG G +S Sbjct: 14 FTSRLGVLWFVILASGLLLFPFIASNYLKTYYIYVANCIAVNIIAAIGLNLLVGCTGQIS 73 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L +A+GAY+ L + G + ++A IS G ++GLP+L+ G YL+IATL Sbjct: 74 LGHAGFFAVGAYATAALTGKLGAPFLPSLLIAASISALLGFLLGLPALRLEGPYLSIATL 133 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 I+ K + + G A L + S YY+ Sbjct: 134 GFGLTITQIIGKIQYL--GARQGLHAPDLVVGPFNLNSDAEK--------------YYLF 177 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 M F + L +T + A+ IRD+ A ++ ++ K AFAVS+ F G+AG Sbjct: 178 AAMAFAACLFARNLMKTRVGRAFIAIRDSDVAASTMGVNLMIYKTLAFAVSAFFAGLAGG 237 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A I PD F +I+ ++++++GG+ S+S +L + + Sbjct: 238 LYAFVLGYIQPDTFNLLMSIMFLAMIVVGGLGSISGAVAGAVLLTWLDLTLRNVLDVPVL 297 Query: 308 SLLKFDCS--------FNMRHTTLMVIALFLVILMRSHSL 339 S + + + L++L L Sbjct: 298 GDWLKSLSQSYFSITGVSNIQYIVFGAIMVLIMLFEPLGL 337 >gi|330837052|ref|YP_004411693.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374] gi|329748955|gb|AEC02311.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374] Length = 322 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 80/307 (26%), Positives = 139/307 (45%), Gaps = 20/307 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + I IY + A G +++ G G+L+L +AIG+Y+ IL + G S W + Sbjct: 3 NFFLLIMIYTGIYALMAMGQNVITGYTGMLALCQAGFFAIGSYATAILSTTAGWSFWATL 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 PV+A++S G+++GLP+L+ +GDYLAIATL EI +NIL W +T G GI Sbjct: 63 PVAALLSAVFGVLIGLPTLRLKGDYLAIATLGFGEIVRNILNNWDSLTRGPMGIQRIPMA 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++ ++ ++ L R+ A IR++ Sbjct: 123 SIFSFVINPYQKW------------AFLAMVWIFVLIAYLFFRRLARSRPGRALEAIRED 170 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A S+ K+SAFA+ +A G+AG+ A ++P + F +++V+ +V+LG Sbjct: 171 EIAASSMGINTTAYKVSAFAIGAAAAGIAGSLQAVYSLSVNPGSYTFMVSVLVLCMVVLG 230 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM + + IL + Y + L + L ++++ R Sbjct: 231 GMGNFAASILGAFILQLI--------SYLPQLVGLSSVIPPQFKQILFGLILVVMMIWRP 282 Query: 337 HSLLRLR 343 LL R Sbjct: 283 QGLLGRR 289 >gi|192290343|ref|YP_001990948.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192284092|gb|ACF00473.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 328 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 70/327 (21%), Positives = 127/327 (38%), Gaps = 24/327 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ Y+ ++ + L+Y + G +I+ G G +SL + + + Sbjct: 13 LIVAALLAAAAACAPLFIKDVYVQNIMVLTLMYAALSQGWNILGGYCGQISLGHALYFGL 72 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L ++ G+ W + +IS + +G P+ + RG Y IAT++++EI + Sbjct: 73 GAYTTALLFTKLGVLPWFGMIGGGIISSVIALALGYPTFRLRGHYFVIATIVIAEIGFLL 132 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 W + ++ YY L C L+ Sbjct: 133 FHNWDWAGAALGIDIPVRGDSWAKFQFTR-------------SKLPYYYFALVFCCLAWL 179 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 I WL + WR ++DN A SL + +K+ A AVS+ + G+F+A I Sbjct: 180 ITWWLEDSKWGYWWRAVKDNPDAAESLGVVVFNSKMGAAAVSAFLTAVGGSFYAMFVSYI 239 Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P+ F ++++ +LGG+ +L AILI + EL + Sbjct: 240 DPESVMTFQFSLLMALPAVLGGIGTLWGPVLGAAILIPLTELTRSFVGGSGRGV------ 293 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 L + ++ L R L+ L Sbjct: 294 ----DLILYGSVIVVIALARPEGLIGL 316 >gi|303233379|ref|ZP_07320048.1| branched-chain amino acid ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] gi|302480508|gb|EFL43599.1| branched-chain amino acid ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] Length = 415 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 73/345 (21%), Positives = 124/345 (35%), Gaps = 19/345 (5%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F L + I +L+V+ + + + +Y S+ QI IYV+ A L++ VG L Sbjct: 27 FKLTHTQGFLINLVLSVIVVAIGQFMISSHMVSRYQLSVIEQIGIYVIMAVSLNLAVGYL 86 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G L L +IG Y I + + L + + L + LA Sbjct: 87 GQLPLGHAGFMSIGGYVGAIFIMQTSQVLHLSQ---RAFVTGQPLAILLVVVGLILGGLA 143 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 A + + +K + G R++ L I ++ Sbjct: 144 AALCGLIIGIPALRLKGDYLAIVTLGFAEIIRVFILNFDSTFNIPLTGGAKGLTGIFLYT 203 Query: 184 YYV-LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 ++ + L +I L ++ A IRDN+ A + + F K AF +S+AF Sbjct: 204 NFINTAVVVALVLFVIHTLMKSRWGRAILAIRDNEIAAEACGINLTFHKTLAFVLSAAFA 263 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 GMAG +A ++P F F +++ V+ +V+LGGM S A L + E Sbjct: 264 GMAGVLYAGCIGVMAPAKFGFMKSVEVLVMVVLGGMGSQLGSVVAAVGLTVLPEALRSFA 323 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L L ++ R L S Sbjct: 324 D---------------LRMIVYSVVLILAMMFRPRGLFGSYDFSL 353 >gi|323494089|ref|ZP_08099205.1| urea ABC transporter, permease protein UrtB [Vibrio brasiliensis LMG 20546] gi|323311716|gb|EGA64864.1| urea ABC transporter, permease protein UrtB [Vibrio brasiliensis LMG 20546] Length = 546 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 98/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ GL+I G +G++++ +GAY+ ++ I + S + Sbjct: 261 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMLGAYTTYVMQQLLPNHIGFALLASIPM 320 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G+ + +L L + +L + + + + Sbjct: 321 AFIVSGLVGVAIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 374 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + ++ + Y++L + +++ L++T + R + N+ + Sbjct: 375 TPDWMAGALEINTMLSLTYNRLYIILFCALVFIGLVMTLKKTPLGLQVRAVSQNRSMARA 434 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + S G+AG + + + I +V+ GG+ +L Sbjct: 435 MGIRSERVDALTFGLGSGVAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 492 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L ++ LM++ + L I R L Sbjct: 493 GTLVAGLGLGLFNKVLEPWAGAVLAK-------------ILMLVFIILFIQKRPRGLFPQ 539 Query: 343 RTPSNF 348 R + Sbjct: 540 RGRAAE 545 >gi|163739542|ref|ZP_02146952.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] gi|161387295|gb|EDQ11654.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] Length = 361 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 70/325 (21%), Positives = 135/325 (41%), Gaps = 17/325 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V L++ ++ +LI+ + GL ++ G G SL AIG Sbjct: 22 LLVYGALVMLALALPLLINEFYIGEVTNVLIWAIAGLGLMLLTGQTGQASLGHAAFLAIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ IL + + P++ +I+G G I+ +P+L+ G YLAIAT+ +S + +I+ Sbjct: 82 CYANTILIEQGLP-FIVAFPLAGVITGIVGGIIAIPALRLHGIYLAIATIALSILADDII 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + +P T G +G +IR F + YY++ G+ + Sbjct: 141 VLLEPWTGGVSGK------------FPDVIRLFGIEIERWTMPVRFYYLVFGVTVICTLF 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R+ + A+ +RD++ + ++ I K +AF +S G AGA + Sbjct: 189 YRNLLRSPLGRAFAAVRDSEVSATAMGVHIARTKATAFGLSCMITGWAGALMGYYAGAFN 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + F +I ++ ++++GG+ S+ ++ + + + S+L + Sbjct: 249 NETFSLVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQGLSILKD----SVLGSGVAIP 304 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 T + + L L IL L Sbjct: 305 GLETGVFGMILILFILFEPMGLYGR 329 >gi|115372910|ref|ZP_01460215.1| branched-chain amino acid ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] gi|310818509|ref|YP_003950867.1| branched chain amino acid ABC transporter permease [Stigmatella aurantiaca DW4/3-1] gi|115370177|gb|EAU69107.1| branched-chain amino acid ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] gi|309391581|gb|ADO69040.1| branched chain amino acid ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 353 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 107/321 (33%), Gaps = 12/321 (3%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + ++ + V+ A L+IV G G S+ A+GAY +L Sbjct: 35 WLLSGSPFAQQLTYRVGVNVVLAVSLNIVNGMTGQFSIGHAGFMAVGAYVSSVLSLSLK- 93 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 ++ A A ++ ++ + G Sbjct: 94 ------EIALSFLPVAVSDQLFFIAALLVGGAAAALCGFLVGLPSLRLRGDYLAIVTLGF 147 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R+ T V + ++V L + + ++ + Sbjct: 148 GEIIRVIVQNTAVFGRALGLSGIPPATSVMMVGFWVFLT-----VLVARRIAGSSHGRSL 202 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 IR+++ A ++ K+ AF +SS F G+AG FA I+P+ F F +++ ++ Sbjct: 203 WAIREDEVAAEAMGVDTTGYKVRAFVISSFFAGVAGGLFAHFVQVINPNSFTFVQSMEIV 262 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +V+LGG+ S + A L + E + + L + L Sbjct: 263 VMVVLGGLGSTTGAIVAAVFLTLLPEALRSLLPMLTEEGSSLSSRVDQIRMPLYGLLLVA 322 Query: 331 VILMRSHSLLRLRTPSNFLER 351 ++L+R L + L R Sbjct: 323 LMLLRPQGLFGTKEIWEVLPR 343 >gi|89056496|ref|YP_511947.1| inner-membrane translocator [Jannaschia sp. CCS1] gi|88866045|gb|ABD56922.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Jannaschia sp. CCS1] Length = 384 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 74/342 (21%), Positives = 139/342 (40%), Gaps = 18/342 (5%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F + ++Y L+ + + + +S+ I LIY + A GL+I+ G Sbjct: 43 FPILFDRYRYYFVLIVGALII------PFVLNDYWANSILIPFLIYAIAAIGLNILTGYC 96 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + GL + + +S +++ G+ GLPSL+ +G YL Sbjct: 97 GQVSLGTGGFMAVGAYTSYKLMTAFPGLDMISVTLLSGVMTAMVGVAFGLPSLRIKGFYL 156 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + K N A ++ + Sbjct: 157 AVATLAAQFFLVWLFNKVPWFYNYSASGQISAPERDFFYFTGIPVT------GPNAEAWA 210 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y F+ A + L R ++ W IRD A + + AKL+AFAVSS ++ Sbjct: 211 KYLFCFLFVFVLAWVARNLTRGSVGRQWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFYV 270 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA +++ +++ +V+ ++I+GG+ S+ A ++ + + Sbjct: 271 GIAGALLFTVYLGAVEVGEVYGITKSFLVLFMIIIGGLGSIFGSFAGAAFMVILPVVLRN 330 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 N F ++ + +++ H L RL Sbjct: 331 FLTGTMNWDSALATHF---EFVIVGALIMFFLIVEPHGLARL 369 >gi|197118327|ref|YP_002138754.1| branched-chain amino acid ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197087687|gb|ACH38958.1| branched-chain amino acid ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 297 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 136/325 (41%), Gaps = 38/325 (11%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 FL Y+ + + I I ++ A GL+++VG G LSL +IGA++ ++ Sbjct: 4 FLNSLVGAVDPYMMQILVNIGIAIVLALGLNVIVGLTGQLSLGHAAFMSIGAFTSAMVTI 63 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + GL + + V+ +++G +G P L+ GDYLAI TL +EI + + ++ Sbjct: 64 KTGLPFSMNLLVTGVVTGIVAAAIGFPILRLTGDYLAICTLGFAEIVKVFFLNFE----- 118 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + I M + + LS ++ +++ + Sbjct: 119 ------------------PTNKALGLTVPPAKTMIPMPIYVWVVAILSIVLVTFVQSSRF 160 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A + IR+++ A ++ K+ AFA+ S G+ G +A I+P F F ++ Sbjct: 161 GRALKAIREDEIAAEAMGINTARYKIQAFALGSFMAGVGGGLYAHFLSYINPSDFGFLKS 220 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + ++++V+LGG+ S+ +++L E M+ Y + Sbjct: 221 VDILAMVVLGGLGSVPGTVIGSSLLASAPEFLRFMSQY---------------RMLVYGA 265 Query: 327 ALFLVILMRSHSLLRLRTPSNFLER 351 L +++ R + LL + L R Sbjct: 266 LLVFLMVFRPNGLLGGVNFTELLLR 290 >gi|319777976|ref|YP_004134406.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171695|gb|ADV15232.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 320 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 87/330 (26%), Positives = 151/330 (45%), Gaps = 30/330 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 ++ L + + Y+ + L+YV+ GL+IVVG GLL L + Sbjct: 20 WSVVLPGLAALALALVLPQFANAYVTEVATTALLYVVLCLGLNIVVGYAGLLDLGYAAFF 79 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAY+ IL + +G + WL IPV+ + G+I+G P+L+ R DYLAI TL EI + Sbjct: 80 AVGAYTSGILTAEFGFNFWLTIPVAMAAACVAGIIIGAPTLRLRSDYLAIVTLGFGEIVR 139 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I IT G +G+ +R G + + F YY L + L+ Sbjct: 140 IIARNL-DITGGASGLIGIERPEIFGFRLMQVQHF--------------YYAFLVLALLT 184 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + L + R+ + AW +R ++ A + + AKL A+ + + +AG +AA Sbjct: 185 AFVCLSVERSRMGRAWFYVRYDEDAAAGIGINRVTAKLQAYMMGAVIASVAGCLYAAKMT 244 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISP+ F F+++++++ V+LGGM + + ++ + E+ G Y Sbjct: 245 AISPESFTFNQSLLILLGVVLGGMGRIPGVVLGAILVALLPEVLRGAGTY---------- 294 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + +AL ++L R + L + Sbjct: 295 -----RPLVTAVALLAIMLFRPNGLWPDKR 319 >gi|237808383|ref|YP_002892823.1| urea ABC transporter, permease protein UrtB [Tolumonas auensis DSM 9187] gi|237500644|gb|ACQ93237.1| urea ABC transporter, permease protein UrtB [Tolumonas auensis DSM 9187] Length = 533 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 101/306 (33%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I V+ GL+I G +G++++ +GAY+ ++ + + +S Sbjct: 248 ISLGSILVLAGIGLAITFGVMGVINMAHGEMMMLGAYTTFVMQKLLPNEPGIALLLSIPA 307 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G+ + +L L + +L + + + Sbjct: 308 AFCVSGLVGIVIERSVIRFLYGRPL------ETLLATFGISLLLQQAVRSIFSPLNQSVV 361 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + S + + F+ + +++L + A ++ L+R+ + R + N+ + Sbjct: 362 MPSWMSGTWVWNDFLSLTLNRMFIILFSLLVFAGLMWLLKRSRLGLEVRAVSQNRAMARN 421 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + S G+AG + + I +V+ GG+ +L Sbjct: 422 MGVRSDWVNARTFGLGSGIAGIAGVALSQLTNV--GPNLGQGYIIDSFMVVVFGGVGNLW 479 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L +L L+++A+ L I R L Sbjct: 480 GTLVAGLSLGIANKLLEPYAGAVLAK-------------ILILVAIILFIQKRPRGLFPQ 526 Query: 343 RTPSNF 348 R + Sbjct: 527 RGRAVE 532 >gi|90417878|ref|ZP_01225790.1| branched-chain amino acid ABC transporter, permease protein [Aurantimonas manganoxydans SI85-9A1] gi|90337550|gb|EAS51201.1| branched-chain amino acid ABC transporter, permease protein [Aurantimonas manganoxydans SI85-9A1] Length = 408 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 120/354 (33%), Gaps = 18/354 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 A+ +L + + + + I+ +FA G +I+ G G LS Sbjct: 36 AFTAIFAAAVLTMPIWLAPIGAGYPDILQKFAIFGIFAIGFNILFGFSGYLSFGHAAFLG 95 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI--- 132 G+Y+ V + ++ +P + +++G +++G L+ G Y +I TL +++ Sbjct: 96 TGSYAAVWMFKLLSMNAIFAVPFAIIVAGLLALVIGFVCLRRAGIYFSILTLAFAQMSYN 155 Query: 133 -FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 ++L G RL + +Y + Sbjct: 156 LAYSVLTPITNGETGLQISRSDPRLIDRALGEVGAGLPKPNFFGIELQGYPGFYFCAILL 215 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L + L +R + I+ NQ L+AF +S + G+AG A Sbjct: 216 VLGFFLALRIRNSTFGMMLFAIKSNQNRMGYTGFAARPYLLTAFVISGMYAGLAGGLLAV 275 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + D +++ + V+ + ILGG+ +L A++ + ++ N + Sbjct: 276 TDPLAGADRMQWTASGEVVLMTILGGVGTLLGPVIGAAVMKYLEQIFSSFNDGFLYRSFD 335 Query: 312 FDCSF-------------NMRHTTLMVIALFLVILMRSHSLL-RLRTPSNFLER 351 F + + + ++++ ++ LR + Sbjct: 336 FLPGWAQNVAVEITSPFVGEGWHLTLGLLFMVIVIFLPGGIMEGLRRIGALFHK 389 >gi|163839015|ref|YP_001623420.1| branched-chain amino acid transport system permease protein [Renibacterium salmoninarum ATCC 33209] gi|162952491|gb|ABY22006.1| branched-chain amino acid transport system permease protein [Renibacterium salmoninarum ATCC 33209] Length = 390 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 144/337 (42%), Gaps = 29/337 (8%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMG-IQILIYVMFAWGLSIVVGSLGL 65 R ++ +L ++ + Y L + T ++ Q+ ++ + A GL+IVVG+ GL Sbjct: 32 RPQQWLWLLIVVGLAYALPVLNPPIITTEPGNNFALACFQMAVFALGAVGLNIVVGNTGL 91 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSI----WLLIPVSAMISGACGMIMGLPSLKFRGDY 121 L L + +A+GAY+ +L S + +PV+ ++ G+I+G+P+L+ RGDY Sbjct: 92 LDLGYIAFFAVGAYTAAMLTSPDSPFVKVPYLWTVPVAMAVTIFFGVILGVPTLRLRGDY 151 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI + + + + + P Sbjct: 152 LAIVTLGFGEIVRIMATIIPAMRGQVGFQNIGRPPGKDAS---------GVPIFSNSNGT 202 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 Y++ + + + ++ L R+ + AW +IR+++ A + K+ FA+ + Sbjct: 203 PWYWLTITVIIIVLLLVGNLERSCVGRAWISIREDEDAAEIMGVPTFKYKVWFFALGAGI 262 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA FA + ++ F +I+ ++ V+LGG + + A++ V + Sbjct: 263 GGLAGALFAGANGFVNNQKFDVQTSILFLAAVVLGGAGNKAGAIIGGAVVAYVPLRFTAI 322 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 Y + AL L+++ R+H Sbjct: 323 ADY---------------KYLIFGAALVLLMIFRAHG 344 >gi|126668636|ref|ZP_01739588.1| Branched-chain amino acid ABC-type transport system, permease components [Marinobacter sp. ELB17] gi|126626895|gb|EAZ97540.1| Branched-chain amino acid ABC-type transport system, permease components [Marinobacter sp. ELB17] Length = 534 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 99/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+I G +G++++ +GAY+ + L + +S Sbjct: 249 LSMGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWGMQQLLPGQPGLALILSIPA 308 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + G+ + YL L + +L + + + Sbjct: 309 GFLVAALAGVVIERTVIQYLKGRPL------ETLLATFGVSLILQQLVRTVVSPLNRTVI 362 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + YV+ + A ++L +R+T + R + N+ S Sbjct: 363 TPEWMSGSVMINEALSLTLNRLYVIGFALVVFAGLMLIMRKTRLGLEVRAVTQNRAMARS 422 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + FA+ S G+AG A S+ S I +V+ GG+ +L Sbjct: 423 MGIRATRVDILTFALGSGVAGLAGV--ALSQITNVGPNLGQSYIIDSFMVVVFGGVGNLW 480 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L + +L ++++ + L I R L Sbjct: 481 GTLLAGLTLGTINQLLEPWVGAVLAK-------------IMVLVMIILFIQKRPRGLFPQ 527 Query: 343 RTPSNF 348 + + Sbjct: 528 KGRAAE 533 >gi|262202786|ref|YP_003273994.1| inner-membrane translocator [Gordonia bronchialis DSM 43247] gi|262086133|gb|ACY22101.1| inner-membrane translocator [Gordonia bronchialis DSM 43247] Length = 329 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 125/310 (40%), Gaps = 6/310 (1%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +G + Y + A GL++ G GLL+ + +G Y I+ Y +WL V Sbjct: 15 VGPSAIFYALLAIGLNLHFGYAGLLNFGQIGFALLGGYGVGIMAVNYDQPLWLGAIVGIA 74 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IKWKPITNGKAGIYVADRLYFL 159 + M++G+P+L+ R DYLAI T+ SEI + + +T+ GIY ++ Sbjct: 75 AAAVLAMVLGVPTLRLRADYLAIVTIAASEILRLVFRSTSTDEVTHSTNGIYGYSAPFYA 134 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + ++ F+ +++ + + L ++ L + + +R+++ A Sbjct: 135 QSPFDNGKQYSFLGIKFIGGDLWAMVIGWSIVALLCLMVYLLSHSPWGRVLKAVREDEDA 194 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L F K+ A + + G F + + I+PD F ++ +ILGG Sbjct: 195 ARALGKNAYFFKMQALVLGGCIGALGGVFNSLASPSINPDFFSTAQTFFAYGALILGGAA 254 Query: 280 SLSKIAKATAILIGVVE----LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 ++ + ++ L + + ++ +A+ L+++ R Sbjct: 255 TVFGPVVGAMLFWFLLAIPDVLLRQATAGDNPLISMTEQQVGAVRYVILGLAIMLMMVFR 314 Query: 336 SHSLLRLRTP 345 +L + Sbjct: 315 PQGILGNKRE 324 >gi|302876894|ref|YP_003845527.1| inner-membrane translocator [Clostridium cellulovorans 743B] gi|307687580|ref|ZP_07630026.1| inner-membrane translocator [Clostridium cellulovorans 743B] gi|302579751|gb|ADL53763.1| inner-membrane translocator [Clostridium cellulovorans 743B] Length = 357 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 74/356 (20%), Positives = 143/356 (40%), Gaps = 45/356 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K ++ + L L +F+ Y + IYV+ A ++++ G GL SL Sbjct: 2 KKKNLILTAIFLVVLFLMVFVADKNMDSYKVRILNLCAIYVILAVSMNLINGFTGLFSLG 61 Query: 70 CVIAYAIGAYSYVILGS-------------------RYGLSIWLLIPVSAMISGACGMIM 110 AIGAY+ +L + + + + ++S +++ Sbjct: 62 HAGFMAIGAYTTALLTMSSETKAQVFFMQPIIEPLANLQVPFPVALLIGGILSALVALLI 121 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 G P L+ RGDYLAIATL EI + I + ITNG GI Sbjct: 122 GAPILRLRGDYLAIATLGFGEIIRVIFTNTQNITNGSMGIKSIPANTN------------ 169 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 + G+ ++ +I L ++ A + IR+++ A ++ + Sbjct: 170 -------------LWWSFGIAVITVILIASLINSSHGRALKAIREDEIAAENMGINLFKH 216 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 K+ +FA+ + F + G A+ I P MF+F+ ++ I++LGGM+S+S + + Sbjct: 217 KMISFAIGAFFAAIGGGLMASLICTIDPLMFRFTMTYNILLIIVLGGMSSISGSVISAFV 276 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + +E ++ ++ MR ++ + V+ R + L+ + + Sbjct: 277 ITIAMEALRFLDESINLGFVRLKGISGMRMVVFSILLMVAVLFFR-NGLMGNKEFT 331 >gi|323701776|ref|ZP_08113447.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] gi|323533312|gb|EGB23180.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] Length = 301 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 69/322 (21%), Positives = 133/322 (41%), Gaps = 41/322 (12%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + Y + I + IY++ A GL+++ G G LS +IGAY+ IL R Sbjct: 6 IFSMFLNDYYIQVLIMLGIYLIGALGLNLISGVTGQLSFGHAAFLSIGAYTSAILSLRLH 65 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L +++ ++ G+++G P+L+ GDYL IATL EI + + + IT G G Sbjct: 66 LPFPMVLLAGGFMAALWGVLLGYPTLRLTGDYLGIATLGFGEIVRVVFLNL-SITGGALG 124 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + R +++ + L+ + L + A Sbjct: 125 LSGIPR-------------------------YTTLTLVIVLVVLTVWAMYRLENSRFGRA 159 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 IR+++ A ++ I +K++AFA+ + G++G +A ++P F F ++ Sbjct: 160 LVAIREDEIAAEAMGVNITTSKITAFAIGTFLAGISGGLYAHLIQYLNPQDFGFQKSFDF 219 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++ V+LGG+ S+ + T +L E + Y + + Sbjct: 220 LTFVVLGGLGSIPGVILGTTVLTLAPEFLRFVAEY---------------RMMVYGALMV 264 Query: 330 LVILMRSHSLLRLRTPSNFLER 351 ++++ R LL + L R Sbjct: 265 IMMIFRPRGLLGGVKLTRLLSR 286 >gi|327400895|ref|YP_004341734.1| ABC transporter integral membrane subunit [Archaeoglobus veneficus SNP6] gi|327316403|gb|AEA47019.1| ABC-type transporter, integral membrane subunit [Archaeoglobus veneficus SNP6] Length = 355 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 67/324 (20%), Positives = 137/324 (42%), Gaps = 9/324 (2%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + L ++ ++ Y+ I I+++ G++I+ G G +SL A+ Sbjct: 24 VALASALVFLAVYPFVFRNDIYMLYWANYIAIFLIATLGINILTGYAGQISLGHGAFMAV 83 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ I + GL + I V A+ + G++ G+PSL+ +G YLAIATL + + Sbjct: 84 GAYTSTITAIKLGLPFPVTIFVGALTAMLFGLLFGVPSLRLKGFYLAIATLAAQYLVDFL 143 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L+ K + + + + F + Y+V + + Sbjct: 144 LVNPKLAWLTGGSAGLVVPEASILGFTITKVPESDF---------YYYFVSVPLAVFFFV 194 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L R+ + AW IRDN A + + KL AFA++S + G+AGA +A + Sbjct: 195 FAANLTRSDVGRAWVAIRDNDIAAEIMGINVFKYKLLAFAIASFYAGVAGALWAYYVGYL 254 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P+ + + +I ++++++GG+ T ++ + EL + + + Sbjct: 255 TPEHYTIALSIDFVAMILIGGLGRHWGSLIGTVFVLSLPELLKRAIIPAISGFMPVTFTA 314 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 + + L ++ H ++ Sbjct: 315 ESLRPIIFGATIILFLIAEPHGIV 338 >gi|240141708|ref|YP_002966188.1| putative ABC transporter, putative membrane protein precursor with two ATP-binding domains [Methylobacterium extorquens AM1] gi|240011685|gb|ACS42911.1| putative ABC transporter, putative membrane protein precursor with two ATP-binding domains [Methylobacterium extorquens AM1] Length = 823 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 137/333 (41%), Gaps = 31/333 (9%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + + L L + Y + + + V+ GL++++G GL+S Sbjct: 3 SPLRAPAAMPLAILALTLAGLGLVAATSGYSHFVIALVALTVVAGTGLNVLLGLAGLISF 62 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 YA+GAY+ IL + WL +P +A +S G + +P+++ RG YLA+ T+ Sbjct: 63 GHAGFYALGAYASAILTLKGVS-FWLALPAAAGLSALVGAALAVPAMRVRGPYLAMVTIA 121 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + ++ LI+ +T G+ G+ VA ++ E + ++ + Sbjct: 122 FGFLVEHALIEGGELTGGQNGLVVATGPS---------------LFGLLLGERDLAWLAV 166 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 LS LR + A R +RD A SL + K +AFA+S+A G+AGA Sbjct: 167 IGAGLSLYGFHRLRHARLGQALRAVRDADVAAASLGFDPVRVKTAAFAISAALTGLAGAV 226 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 I+P F F+++I+ + V++GG ++ + + + E G+ Y Sbjct: 227 LPPLMLFIAPSSFPFTQSILFVLAVVVGGAGTVLGPLFGALVTVLLPEALAGLAEY---- 282 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +V+ + ++ Sbjct: 283 -----------RLLFFGLTTLVVLWLVPAGIVG 304 >gi|311104161|ref|YP_003977014.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310758850|gb|ADP14299.1| inner-membrane translocator 16 [Achromobacter xylosoxidans A8] Length = 597 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 105/314 (33%), Gaps = 14/314 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ I +Y M A GL ++ G GL S +GAY+ +L +R L + Sbjct: 25 YVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGVGAYTTALLTTRADT---LPSWL 81 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + ++ +L YL A + + I G + +V + Sbjct: 82 AWLGASPWLTLLAGLALTVVIAYLLGAITLK---LSGHFLPLGTIAWGLSLYFVFGSVEG 138 Query: 159 LGTTVRSLIRFFRFPSSFVIYEI-FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 LG + + + +YY++ ++ L + A R ++ + Sbjct: 139 LGGHTGIPDIPAISLFGWTLNQGDNIYYLIWAFLLVAVWSTQNLLDSREGRAIRALKGGR 198 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 S+ +++ F +++ +G +A + ++P+ F I + + ++GG Sbjct: 199 VMAESMGVDTARSRMVIFIIAALQACASGWLYAHMQRFVNPNPFGLQMGIEYLFMTVIGG 258 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + + + + F + + L++ Sbjct: 259 AGQVWGALVGAGVFTVLKQWLQDWMPKLLGQTGNF-------EVIVFGFGMVLLLHRARS 311 Query: 338 SLLRLRTPSNFLER 351 L + T +++ Sbjct: 312 GLWPVLTRCVPVKK 325 >gi|295696320|ref|YP_003589558.1| inner-membrane translocator [Bacillus tusciae DSM 2912] gi|295411922|gb|ADG06414.1| inner-membrane translocator [Bacillus tusciae DSM 2912] Length = 326 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 62/333 (18%), Positives = 132/333 (39%), Gaps = 42/333 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ L + Y+ + Q+ + V+ A L+++ G G S+ Sbjct: 21 WIGIGLALYAIIGLLIDNGIIDSYMALIVYQMCLNVVLAVSLNLINGFTGQFSIGHAGFA 80 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAY +L ++ L + + ++A+ + G+++G+P+L+ +GDYLAI TL +I Q Sbjct: 81 AVGAYVSAVLTAKMQLPFFPALIIAALAAAVAGLLIGIPTLRLKGDYLAITTLGFGQIIQ 140 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ILI + + + + L ++ Sbjct: 141 VILINLQYVGGAAGMTVHKE---------------------------TNFTWLYFAALIT 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +I + A +R+N+ A + + + K+ AF++ + F G+AGA A + Sbjct: 174 VVVIANFVHSRHGRACIAVRENEVAAEMMGINVTYYKVLAFSMGALFAGVAGALSAHTFY 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I P + F ++ ++ IV+LGG+ S++ +L + Sbjct: 234 FIKPTSYGFLQSFNILVIVVLGGLGSITGSILGAVVLTLITAFLQDY------------- 280 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L L+++ R L+ + Sbjct: 281 --PQWQMVIYSLILVLIMIFRPQGLMGTKEFRL 311 >gi|317484132|ref|ZP_07943062.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] gi|316924636|gb|EFV45792.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] Length = 346 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 79/306 (25%), Positives = 132/306 (43%), Gaps = 30/306 (9%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 M +I IY A L++++G GL + +A+GAY+ IL + Y ++ +P++ Sbjct: 44 DMLNKIGIYAALALSLNLILGQTGLFHMGHTAFFAMGAYTTAILNTVYHWPVFATMPIAG 103 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKWKPITNGKAGIYVADRLYFL 159 +++ ++ P + RGDYL I T+ + EI + L +T G GIY R Sbjct: 104 VLAAIFAFVLAKPIIHLRGDYLLIVTIGIVEIVRIALTNNLFGLTGGANGIYGIARPSLF 163 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 G S R F +F I +F++YVL + A IR + A Sbjct: 164 GMVFSSPKRQFYLIWTFTILTMFLFYVL--------------EHSRFGRALNYIRYDDLA 209 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + KL AF V + + GM G FAA+ I P F F E++I+ +IVILGG Sbjct: 210 ASGCGIDVTQYKLMAFTVGAFWAGMVGTLFAANIRTIEPTSFNFYESVILFAIVILGGSG 269 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S++ + +LIG+ ++ + A+ +++++ L Sbjct: 270 SIAGVVLGAFLLIGLQDVFREFE---------------SARMLIFGAAMMVMMIICPQGL 314 Query: 340 LRLRTP 345 L R Sbjct: 315 LPPRRR 320 >gi|322385049|ref|ZP_08058699.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus cristatus ATCC 51100] gi|321270959|gb|EFX53869.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus cristatus ATCC 51100] Length = 317 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 146/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L + LL+ + + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNALWLALILFGYLLMTVLASTGILNPFYLQIFEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + V A+I+GA +++G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIMGSKSPNYGTFFIAMLVGAVIAGAVALLVGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +++ +TNG AGI ++ Sbjct: 126 GVSEIIRILIVNGGDLTNGAAGILSIPNFTSWQ-------------------------LV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKVIAFVFGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F I V+ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFINTINVLIIVVFGGLGSMTGAIVAAVVLGILNMLLQDI------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSVRMIVYSLALILVMIFRPGGLLGTWEFSL 305 >gi|291518118|emb|CBK73339.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Butyrivibrio fibrisolvens 16/4] Length = 359 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 71/344 (20%), Positives = 143/344 (41%), Gaps = 25/344 (7%) Query: 1 MSIFSL--RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSI 58 MS+F + + + VV +++ + G + + + + Y + A GL++ Sbjct: 1 MSLFKNLNKSTQKLLGTIGVIVVLYIVMTIMDGTGNLSSLMKGLLVPVCAYSLVAVGLNL 60 Query: 59 VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI------WLLIPVSAMISGACGMIMGL 112 VG LG LSL +GA+S + +I + + + ++ G ++ + Sbjct: 61 CVGYLGELSLGHAGFMCVGAFSSAFFSRAFQDAIPDVPRYIIALVLGTAMAALFGFLIAI 120 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 P L+ +GDYLAI TL EI +N++ T+ + + +G + + Sbjct: 121 PVLRLKGDYLAIVTLAFGEIIKNVINVMYVGTDSEGMHFSMKDQLSMGMALDGKMIINGP 180 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + + + + L+ + + A + IRDNQ A ++ + KL Sbjct: 181 QGITGTPRQSTFTIAVLLLILALVVTHNFVNSRTGRAVKAIRDNQIAAETVGLPVTKYKL 240 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAI 290 +AF +S+A G+ G +A + + ++ F N I+++ V+LGG+ + S A + Sbjct: 241 TAFTISAAIAGLGGVLYAHNINSLTATTNNFGYNMSIMILVYVVLGGIGNFSGSVVAAVV 300 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 L + EL G++ Y + I L +++L Sbjct: 301 LTMLPELLRGLSTY---------------RMLIYSIVLIVLMLF 329 >gi|224369228|ref|YP_002603392.1| LivM3 [Desulfobacterium autotrophicum HRM2] gi|223691945|gb|ACN15228.1| LivM3 [Desulfobacterium autotrophicum HRM2] Length = 334 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 117/328 (35%), Gaps = 24/328 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L A++ L + + + I IL++ + +I+ G G +S + + Sbjct: 11 LIWFALIIGFALLPVIPGVFDSSFTQHVFILILLFACMSQSWNIIGGYCGQVSFGHSVFF 70 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY + YGL W V A + + + P + G Y AIAT M EIF Sbjct: 71 GIGAYGAGMAVVTYGLPPWPGALVGAAAAALVAVAISWPVFRLSGHYFAIATFAMVEIFN 130 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + W + Y + + +I YY L + Sbjct: 131 RLFMVWYWVGGALGLDY-------------PFVDEGIKNFIWFENKIPYYYGALVLFIFI 177 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + WL R + + +R+ QK SL KL A +S+ G+ GAFF Sbjct: 178 FGTVRWLERNRLGYYLKAVREGQKTAESLGVNSTLVKLLAMGISAFLAGLCGAFFVQYNY 237 Query: 255 RISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 R+ P M ++ + I ILGG + +LI + E + + Sbjct: 238 RVDPAMVMSLDMSMKFVLITILGGTGTFFGPLLGAMVLIPLQEYSRAYLGSLGSGV---- 293 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + LVI+ + ++ Sbjct: 294 ------DLIIFGLLIVLVIIKQPRGIMG 315 >gi|209550638|ref|YP_002282555.1| urea ABC transporter permease UrtB [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536394|gb|ACI56329.1| urea ABC transporter, permease protein UrtB [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 550 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 93/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY+ ++ + + S + + Sbjct: 271 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYVVQEYITSAFPGVADYSLAFAVPAAFVFT 330 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + S + Sbjct: 331 GFVGLVIERA--VIRYLYGRPLETLLATWGVSLILQQAVRSIFGPTNREVRNPSWMSGV- 387 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + ++L L+R+A R + N++ S+ + Sbjct: 388 FDLGGLSITWNRLWIIVFSMVVFVMLLLLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 447 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S G+AG A S+ S I +V+ GG+ +L L Sbjct: 448 AFTFALGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALSL 505 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 V + L+++ + L I R L L+ + Sbjct: 506 GVVNKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 549 >gi|117923802|ref|YP_864419.1| inner-membrane translocator [Magnetococcus sp. MC-1] gi|117607558|gb|ABK43013.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Magnetococcus sp. MC-1] Length = 424 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 103/344 (29%), Positives = 164/344 (47%), Gaps = 26/344 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L+ KY ++ I LIY++ GL+IVVG GLL L V YA+GA Sbjct: 93 ILVVLTLMVAMALPFLLSKYWLNVAILALIYILLGLGLNIVVGLAGLLDLGFVAFYAVGA 152 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 YSY + GLS W IP +A+++ + G ++G P L+ GDYLAI TL EI + +L Sbjct: 153 YSYALGAEYLGLSFWQAIPFAALLAASFGAVLGFPVLRMHGDYLAIVTLGFGEIIRLVLN 212 Query: 139 KWKPITNGKAGIYVADRLYFLG-----------TTVRSLIRFFRFPSSFVIYEIFMYYVL 187 W +T G G+ F L ++ S +F+Y L Sbjct: 213 NWISLTGGPNGLRTPLPTLFGMEFTKRATQGGTPYHEVLGQWMEIDYSRAARYVFIYVTL 272 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + L ++ L+R I AW +R+++ A SL + KLSAF++ + G+ G Sbjct: 273 LVVVTLLVYMVQRLKRMPIGRAWEALREDEIACRSLGINHVMVKLSAFSMGAMVGGVGGV 332 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 FFAAS+ ++P F F E+ ++++IV+LGG+ S+ + A +L + EL Y Sbjct: 333 FFAASQGFVNPASFTFFESALILAIVVLGGLGSVVGVIVAAVVLTVLPELLRDFTEY--- 389 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + A+ ++++ R LLR+ P +E+ Sbjct: 390 ------------RVLIFGCAMVVMMVWRPRGLLRIHRPEFVVEK 421 >gi|254500366|ref|ZP_05112517.1| amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222436437|gb|EEE43116.1| amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 539 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 89/297 (29%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY ++ S L S I+ Sbjct: 260 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFVVQELIRTSAPGLFDYSLFIALPLAFATS 319 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 G + + + +L W + + Sbjct: 320 GLIGI--GIERGVIRWLYGRPLETLLATWGISLILQQAVRSIFGPTNREVGNPDW-MSGA 376 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + +++L + A +IL L++T R + N++ S+ + Sbjct: 377 FEIGQMTVTYNRMWIILFALLVFAGLILVLKKTPFGLYTRAVTQNRRMAASMGIRTPWVD 436 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ I +V+ GG+ +L L Sbjct: 437 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAMTL 494 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 V + L+++ + L I R L L+ + Sbjct: 495 GVVNKFLEPYAGAVLAK-------------ILVLVFIILFIQKRPRGLFALKGRAVE 538 >gi|330836846|ref|YP_004411487.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Spirochaeta coccoides DSM 17374] gi|329748749|gb|AEC02105.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Spirochaeta coccoides DSM 17374] Length = 368 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 138/357 (38%), Gaps = 44/357 (12%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 KIL + + L+FL + + + + IYV+ A ++++ G G SL Sbjct: 15 RKKILPTVGAIAVFLVFLAIAPSILGAFELRIFNLCGIYVVLALSMNLINGFTGQFSLGH 74 Query: 71 VIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGACGMIMG 111 A+GAY +L + + + ++ +++ ++G Sbjct: 75 AGFMAVGAYVSALLTMSPATKSAVYYLKPIVPFLATVQVPFTVALVMAGLVTALVAALIG 134 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 P L+ + DYLAIATL SEI + + + ITNG G+ R Sbjct: 135 APVLRLKDDYLAIATLGFSEIIRVVFTNLQSITNGSLGLKNIPR---------------- 178 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + G + ++ L + + A++ IRD++ A ++ + K Sbjct: 179 ---------YTTIWWAWGTALFVIAFMVLLIKGSYGRAFKAIRDDEIAAEAMGVNLFSHK 229 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L+AF + + F G+ GA I P+M+K S ++ IV+LGG+ S++ + + Sbjct: 230 LAAFMIGAFFAGVGGALMGNQLGAIDPNMYKISLTYNILLIVVLGGIGSITGSVISAMAV 289 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++EL ++ L + L +IL ++ + S Sbjct: 290 TILMELLRPLDESMNVFGLFIIPGIPGMRMVVFSAILMSIILFYQRGIMGNKEFSWE 346 >gi|329937724|ref|ZP_08287243.1| branched-chain amino acid ABC transport permease [Streptomyces griseoaurantiacus M045] gi|329303123|gb|EGG47011.1| branched-chain amino acid ABC transport permease [Streptomyces griseoaurantiacus M045] Length = 385 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 123/314 (39%), Gaps = 7/314 (2%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + +G+ + A GLS++ G+ G LSL A+GAY YV L G Sbjct: 31 PFYLDAFWLRLGLFCTAAAIGAVGLSLLTGTAGQLSLGHAFFLAVGAYGYVWLAGEPGPG 90 Query: 92 IWLLIPVSAMISGACGMIMGL--PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + + ++ A + + + RG YL +ATL + + ++L+ +T G G Sbjct: 91 LPPPLALVLAVALAGLAGLLFGPVAGRVRGIYLGVATLALVFLGHHLLLAAGTVTGGFNG 150 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + F G + E ++Y+ L + S L R A Sbjct: 151 RS-VPPMAFGGFAFTAQEPELLVLGVPFGAEERLWYLGLALFAGSWYTARNLLRGRPGRA 209 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 +RD++ A L + + +AF VSS + G+AG A + R+ PD F + ++ Sbjct: 210 LVALRDSETAASVLGVAVARHRSAAFVVSSMYAGLAGVLLALAFRRVVPDYFGLALSVDY 269 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDCSFNMRHTTLMV 325 ++++++GG+ S++ + + L + + L Sbjct: 270 LAMIVIGGLGSVAGATAGACFVTALPLLMARYADHLPFLAAPGTTEGGLGPTEAARYLYG 329 Query: 326 IALFLVILMRSHSL 339 A+ LV+L L Sbjct: 330 AAVVLVLLRAPDGL 343 >gi|119382808|ref|YP_913864.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119372575|gb|ABL68168.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Paracoccus denitrificans PD1222] Length = 368 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 80/351 (22%), Positives = 143/351 (40%), Gaps = 21/351 (5%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++L+++ L + FL + + +++ + LIY + A GL+I+ G Sbjct: 30 FPIKLDRWGYYAILA------VAFLVVPLVIDSYWANAVLVPFLIYAIAALGLNILTGYA 83 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + G+ I + I ++ I+ GM+ GLPSL+ +G YL Sbjct: 84 GQVSLGTGGFMAVGAYAVYKLMVAFPGVPIVVHIILAGAITAVVGMLFGLPSLRIKGFYL 143 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + K N + Sbjct: 144 AVATLAAQFFLVWLFNKVPWFYNYS---------ASGQINAPERTILGWAVTGPATSASA 194 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y + L A + L R ++ W IRD A + + AKLSAFAVSS F+ Sbjct: 195 KYLICLCFAVGLAWMARNLTRGSVGRKWMAIRDMDIAAEIIGVNPLTAKLSAFAVSSFFV 254 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA + + + F +++ +V+ ++I+GG+ S+ A L+ + L Sbjct: 255 GIAGALLFSVYLGAAEASEAFGINKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVLLKN 314 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + F ++ + +++ H L RL + R Sbjct: 315 VLVAQFGWPTDLA---AHIELMIVGALIVFFLIVEPHGLARLWALTKEKLR 362 >gi|315641260|ref|ZP_07896337.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315483027|gb|EFU73546.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 326 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 73/341 (21%), Positives = 137/341 (40%), Gaps = 42/341 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 KY+ LL +V LF + D++ + I I ++ A L++++G G SL Sbjct: 6 KYNLTWLLLTLVIYFGLFGLYNGGFINIFTDAIIVNIGINIILAVSLNLIIGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ + L I V +I+G ++G P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYASAIITTKNPTFGGFLLAIIVGMIIAGVVAFVVGTPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +++ +TNG +GI+ ++ Sbjct: 126 GISEIIRILIVNNSWLTNGPSGIFGIPEFSNWQ-------------------------LV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L+ + + A ++R+++ A S+ K+ AF +AG Sbjct: 161 FIFAVLTVVFVSNFINSGGGRATLSVREDEIAAESMGVNTTKFKVIAFVFGGMLASLAGT 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A+ + + P + F+++I ++ I + GG+ S + A +L + Sbjct: 221 LYASYQQSVFPSDYTFNKSIDILIIAVFGGLGSTTGSVLAAIVLGVLNMYLQ-------- 272 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 F + +AL +++ + LL S Sbjct: 273 -------DFGSLRMIIYALALIGIMIFKPSGLLGTWEFSIK 306 >gi|147676410|ref|YP_001210625.1| ABC-type branched-chain amino acid transport system, permease component [Pelotomaculum thermopropionicum SI] gi|146272507|dbj|BAF58256.1| ABC-type branched-chain amino acid transport system, permease component [Pelotomaculum thermopropionicum SI] Length = 341 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 121/344 (35%), Gaps = 36/344 (10%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 ++ L LLA + + + Y + Q LI + A GL I+ G G SL Sbjct: 9 SRQTAALLLLAAAIYTAVKILALSGLLTPYWLLVLDQALITTIGALGLCIIYGFAGQFSL 68 Query: 69 NCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 Y +GAY+ + G +P + + ++GLP L+ R DYL I Sbjct: 69 GHAAFYGLGAYTAGTISKLLGHGSLAWFIAALPAGMLAAALVAFLIGLPILRLRSDYLGI 128 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 ATL I + + + + ++ + Sbjct: 129 ATLGFGIIVKVGMDNSNKLF----------------------PVLGGATGMAGLPQVATF 166 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + +S ++ ++ + + IRD++ A + +K+ AF A G+ Sbjct: 167 DFIFLFAVISVLLVRNFIHSSYGRSCKAIRDDEIAADIMGIDTTRSKVLAFVFGCALAGL 226 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA +A I P F F ++ + IV+LGG+ S++ + ++E + Sbjct: 227 AGALYAHRYPFIHPSSFDFLKSFDFLLIVVLGGLGSMTGTVITAIGWVFLLEGLRFV--- 283 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 F + + L + IL R + + F Sbjct: 284 -------LGQQFIEFRGVIYALILVITILSRPQGIFGGKELGIF 320 >gi|295110633|emb|CBL24586.1| ABC-type branched-chain amino acid transport system, permease component [Ruminococcus obeum A2-162] Length = 332 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 132/321 (41%), Gaps = 26/321 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L++FL + A + YI S + + + A +I+ G G +S A+GAY+ Sbjct: 14 VLLVIFLLIPAVTTGNYIISNLVNCMFFAAMAGCWNIIGGYGGQVSWCHASFVAVGAYAN 73 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 IL + +G S +L IPV +I+ I+G + + G Y +IAT+ E + ++ + Sbjct: 74 FILNTEFGWSPFLTIPVGMVIAAIIATIVGYSTFRLHGPYFSIATIACGEAIRVLIQHFD 133 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G AG+YV R + I YY+ L + L + Sbjct: 134 KVTKGAAGMYVTYRQHDFWLLTFEND-------------IPFYYIALVLVLLMVLVTYLF 180 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 ++ I+ ++ A SL KL AF +S+ + G F+A+ I+P Sbjct: 181 TKSKTGYYLSAIKGDETAAESLGIETFKIKLKAFQLSAMMAAVVGCFYASFLTYIAPTST 240 Query: 262 -KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F ++ + + I+GG+ SL +++ ++E + S Sbjct: 241 ASFDLSMKIGVVAIVGGVASLWGSVIGGFVVVLLIEATSVLFGSAGGS------------ 288 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + I L LVI+ + ++ Sbjct: 289 QMVYGILLMLVIIFKPEGIIG 309 >gi|116751484|ref|YP_848171.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116700548|gb|ABK19736.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 327 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 77/335 (22%), Positives = 143/335 (42%), Gaps = 28/335 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +N+ + + L A ++ + + K+ + + + I+ + + GLS+++G G +S Sbjct: 1 MNRREWLGFLCAALFIGVFPWVVVPFKAVSHYVDVMVFAGIFSLVSLGLSMLMGFAGQIS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + + IGAY+ IL SR+G + +P+ + S A ++G+P+L+ +G YLA+ATL Sbjct: 61 MAQAAFFGIGAYTSGILTSRFGWNPVPAMPIGMLASAAVAWLIGIPALRLKGHYLAMATL 120 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 I +L + T G +G+ RL F + I YY++ Sbjct: 121 GFGVIVHIVLGEEVAWTGGPSGMSDIPRLRFGDVRITGE--------------IAWYYIV 166 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 F+ + R+ + A R I + + A S+ KL F +S+ F +AG+ Sbjct: 167 WVTVFIGLVFCFHILRSRVGRALRAIHEEETAAESMGVPTARYKLQVFVLSAVFAALAGS 226 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F+ ++P F +I + +V++GGM SL T +L V Sbjct: 227 FYTHYVTCLNPGSFNLMWSIRFVLMVMVGGMQSLWGAIVGTVLLTFVGN----------- 275 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ F + L +V L L+ L Sbjct: 276 ---EWLQVFADFEIVIYGAILLVVALFLPGGLMSL 307 >gi|224418043|ref|ZP_03656049.1| ABC transporter permease [Helicobacter canadensis MIT 98-5491] gi|253827374|ref|ZP_04870259.1| ABC transporter, permease protein [Helicobacter canadensis MIT 98-5491] gi|313141581|ref|ZP_07803774.1| abc transport system permease protein [Helicobacter canadensis MIT 98-5491] gi|253510780|gb|EES89439.1| ABC transporter, permease protein [Helicobacter canadensis MIT 98-5491] gi|313130612|gb|EFR48229.1| abc transport system permease protein [Helicobacter canadensis MIT 98-5491] Length = 399 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 67/371 (18%), Positives = 132/371 (35%), Gaps = 38/371 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + +++ LFL Y+ + ILI+++ A +++ G G LSL AIG Sbjct: 21 FLLYIGVIIVLFLAQCFLNDYVLRIFNNILIFIILAVSYNLINGVTGQLSLEPNGFVAIG 80 Query: 78 AYSYVIL-------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 AY ++ + + S +++ +++ P + R Sbjct: 81 AYITALMLLDEDSKLGMFDLADPHPFILSMNSELLPALLCSGLVAAFIAILLAFPVFRVR 140 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV- 177 GDYLAI TL I + + I TNG G+ + S + Sbjct: 141 GDYLAIVTLGFGFIIKILAINNPEWTNGAIGLNEIPNNADSVVGGLRNLMQGWIASPSLP 200 Query: 178 -----------------IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 +I + + + + +IL + + A + +RD++ A Sbjct: 201 EFLKESLAFIYKHSFENGADITVLFWSGILAAAAVILILQVVSSKYGRAMKAVRDDEDAA 260 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ K AF+ S+ G+ G A I P +F F ++ I++LGG+ S Sbjct: 261 IAMGINTFKIKTFAFSTSAFLEGVGGGLMAVLLTTIDPKIFGFELTFQLLIIIVLGGLGS 320 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S ++IG E ++ F ++ + L +++L ++ Sbjct: 321 TSGAILGAILVIGGGEWLRFLDQPLVFFGTDFG-TYPGLRMVFFSLILLIIMLFAREGIM 379 Query: 341 RLRTPSNFLER 351 + + R Sbjct: 380 GKKEIWDLKPR 390 >gi|224371730|ref|YP_002605894.1| ABC-type branched-chain amino acid transport-system, ATP-binding protein [Desulfobacterium autotrophicum HRM2] gi|223694447|gb|ACN17730.1| ABC-type branched-chain amino acid transport-system, ATP-binding protein [Desulfobacterium autotrophicum HRM2] Length = 321 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 128/318 (40%), Gaps = 29/318 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 +L + +GA Y+ + I I + A GL++++G G +SL Y IGAY+ Sbjct: 17 LFVLAVILMGAMVENTYLLQIMTFIGINTLLALGLNMLMGYAGQVSLGQGAFYGIGAYAT 76 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 IL +G+S WL + + ++ ++G P+L+ G YL + TL I + Sbjct: 77 AILSGTHGVSPWLALVFAIALAVGVAWVVGRPTLRLSGYYLGMGTLGFGMIVHIFFREAG 136 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G +G L +Y++ + F + + + Sbjct: 137 SLTGGASGFVGIPMLGIGSFMFEG--------------GRSYFYLVWAVVFGTMLVCRRI 182 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + A I + A +L KL+ F S+A MAG F+A ISPD F Sbjct: 183 IDSKTGRALAAIHGRENAAVALGVDAHSVKLTIFMFSAALGAMAGFFYAHFVLFISPDSF 242 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F +I ++++V++GGM S+ A++ + E+ G Y Sbjct: 243 GFMASIKMVTMVVIGGMASVWGAVLGAAVITLLPEVLHGFADY---------------EM 287 Query: 322 TLMVIALFLVILMRSHSL 339 + + L V+++ L Sbjct: 288 IVFGVILMGVMIVMPQGL 305 >gi|125718526|ref|YP_001035659.1| branched-chain amino acid ABC transporter permease [Streptococcus sanguinis SK36] gi|125498443|gb|ABN45109.1| ABC transporter membrane-spanning permease-branched chain amino acid transport, putative [Streptococcus sanguinis SK36] Length = 317 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LL+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + A+I+G + +GLP+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALTVGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K++AF + + +AG+ Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305 >gi|313898220|ref|ZP_07831758.1| branched-chain amino acid ABC transporter, permease protein [Clostridium sp. HGF2] gi|312956984|gb|EFR38614.1| branched-chain amino acid ABC transporter, permease protein [Clostridium sp. HGF2] Length = 319 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 135/341 (39%), Gaps = 43/341 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +K + L ++ L + Y S I I ++ A L++++G G S Sbjct: 5 FSKLNLCWILFTTALLTIITLLMQGGVINFYYQSTLYTIGINIILAISLNLIIGVTGQFS 64 Query: 68 LNCVIAYAIGAYSYVILGSRYGL--SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L IGAY+ I+ L + + +IS +++ +P+L+ +GDYLAIA Sbjct: 65 LGHAGFMCIGAYAAAIITKATPNLGGFALAVVIGGVISALVALVVAIPTLRLKGDYLAIA 124 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL SEI + I++ F I ++ + Sbjct: 125 TLGFSEIVRIIVLNMTITNGAA--------------------------GLFGIPKLTTWP 158 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +LL +S I+L R+A A +IR+++ A ++ K AF + + +A Sbjct: 159 LLLFCLIVSLLIVLNFSRSAPGRACISIREDEIASEAMGINTTKYKTIAFVIGAVLASLA 218 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA +A + + PD+F F++++ ++ +V+ GGM S + A ++ + Sbjct: 219 GALYACNFYVVKPDLFTFNKSVDILILVVFGGMGSFTGSIVAAVVIGFINMYLQNFAD-- 276 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + AL L+++ R L + + Sbjct: 277 -------------VRMIIYGAALVLIMVFRPEGLFGTKEFT 304 >gi|39934819|ref|NP_947095.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] gi|39648669|emb|CAE27191.1| putative branched-chain amino acid transport system permease protein [Rhodopseudomonas palustris CGA009] Length = 328 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 70/327 (21%), Positives = 127/327 (38%), Gaps = 24/327 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ Y+ ++ + L+Y + G +I+ G G +SL + + + Sbjct: 13 LIVAALLAAAAACAPLFIKDVYVQNIMVLTLMYAALSQGWNILGGYCGQISLGHALYFGL 72 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L ++ G+ W + +IS + +G P+ + RG Y IAT++++EI + Sbjct: 73 GAYTTALLFTKLGVLPWFGMIGGGIISSVIALALGYPTFRLRGHYFVIATIVIAEIGFLL 132 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 W + ++ YY L C L+ Sbjct: 133 FHNWDWAGAALGIDIPVRGDSWAKFQFTR-------------SKLPYYYFALVFCCLAWL 179 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 I WL + WR ++DN A SL + +K+ A AVS+ + G+F+A I Sbjct: 180 ITWWLEDSKWGYWWRAVKDNPDAAESLGVVVFNSKMGAAAVSAFLTAVGGSFYAMFVSYI 239 Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P+ F ++++ +LGG+ +L AILI + EL + Sbjct: 240 DPESVMTFQFSLLMALPAVLGGIGTLWGPVLGAAILIPLTELTRSFVGGSGRGV------ 293 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 L + ++ L R L+ L Sbjct: 294 ----DLILYGSVIVMIALARPEGLIGL 316 >gi|71907977|ref|YP_285564.1| inner-membrane translocator [Dechloromonas aromatica RCB] gi|71847598|gb|AAZ47094.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Dechloromonas aromatica RCB] Length = 348 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 16/309 (5%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 Y + + I + A GL+I+ G GL+SL +GAY+ IL R+G Sbjct: 36 FPFVVDDYWLYLACLVAINIASATGLNILTGYTGLVSLGQAAFMGLGAYTVAILEQRFGT 95 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 L + ++ G+++G+PSL+ +G YLAI+T+ S I + W +T G G+ Sbjct: 96 PAVLNLVAGGAVAMLVGVVVGIPSLRVKGLYLAISTIAASFILHFVFANWSSLTGGTGGM 155 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V F + +Y++++ + L RT I A+ Sbjct: 156 TVPPA---------------NFFGIPLDTSFRLYWLIVPVALTMLVCAANLFRTRIGRAF 200 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 IRD + L ++ KL++FA+SS + G+AG +A ++P+ F +I + Sbjct: 201 IAIRDRDISAEVLGIPLLRYKLTSFALSSFYAGVAGGLWAYFFRVVTPESFPLMMSIFFL 260 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + VI+GGM ++ + V E+ + + + + T + + + Sbjct: 261 AAVIVGGMGTILGGILGAIFMTMVPEVLK-LIVGWLPLGSEGAVILSPVRTIVFGLLIVG 319 Query: 331 VILMRSHSL 339 ++ L Sbjct: 320 FLIFEPLGL 328 >gi|55980554|ref|YP_143851.1| branched-chain amino acid ABC transporter permease [Thermus thermophilus HB8] gi|55771967|dbj|BAD70408.1| branched-chain amino acid ABC transporter, permease protein [Thermus thermophilus HB8] Length = 355 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 113/306 (36%), Gaps = 21/306 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + + I + A GL ++VG G +SL +GAY+ L LL Sbjct: 56 PYPMYVATLVAIGALSALGLHLLVGGAGQISLGHAAFMGVGAYAASHLTGPLAPLGILLG 115 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 A + G + L + +G YLAIATL + + W+ +T G G + Sbjct: 116 GGIAALLGLLLGLPSL---RIKGVYLAIATLAFQFLADYVFKTWEAVTGGIRGRTLPPPE 172 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++Y++L L T A+R +RDN Sbjct: 173 ---------------VLGLVLDTPEKLWYLVLLFALPLFFYGKRLLMTRAGRAFRAVRDN 217 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + KL AFA+S+ + G+AG A ++P+ F S +I +++VI+G Sbjct: 218 DLSARVAGVDLTRTKLLAFALSAFYAGVAGGLLAGLYKAVTPEYFPLSVSIQYLAMVIVG 277 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G ++ ++ + E+ + + + L +++ Sbjct: 278 GAGTVLGAVLGAFFVLLIPEVLNSFVGALGPE---YAAQLAAWRNVVFGGLILLFLVLEP 334 Query: 337 HSLLRL 342 L+ L Sbjct: 335 LGLVGL 340 >gi|296272922|ref|YP_003655553.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299] gi|296097096|gb|ADG93046.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299] Length = 346 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 70/356 (19%), Positives = 132/356 (37%), Gaps = 45/356 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L ++ + F + +Y + + I+++ A +++ G G SL Sbjct: 12 IINLGIIITAIWFTWFAQQVFDEYTVRIINNVAIFIILAVSYNLINGVTGQFSLEPNGFV 71 Query: 75 AIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 AIGAY I + + + +S +IS + + P Sbjct: 72 AIGAYVTAILLVDKEGMLYQYDISDPYPWVLALQTNFFWALILSGIISALLALSLSFPVF 131 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + RGDYLAI TL I + + I ITNG GI + Sbjct: 132 RVRGDYLAIVTLGFGFIIRILAINSPEITNGSLGINDIPQFSN----------------- 174 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 Y G+ + IL + + A + +RD++ A ++ K AF Sbjct: 175 --------LYWTGGVAIFAVLAILNIIYSKYGRAMKAVRDDEDAASAMGINTFKVKTLAF 226 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 S+ F G+ G AA ISPD+F F ++ I+++GG+ S + T +++ + Sbjct: 227 TTSAFFEGVGGGLLAALLTSISPDLFTFFFTFQLLIIIVIGGLGSTTGAIIGTVMVMAGL 286 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 E ++ N + + + + L +V+L L+ + + ++ Sbjct: 287 EWMRFLDEP-INFMGIHTDALPGMRMVVFALILIVVMLFAREGLMGKKELKDLFKK 341 >gi|311104567|ref|YP_003977420.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310759256|gb|ADP14705.1| inner-membrane translocator 18 [Achromobacter xylosoxidans A8] Length = 337 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 25/324 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A + L + L +Y+ S+G L+Y A +I+ G G LSL + +G Sbjct: 10 AAAIAALGVLALLPLASGNQYLLSVGAMTLLYAYLALSWNILGGIAGQLSLGHAAYFGLG 69 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ L G+S WL + A+++ +++GL L+ RG Y A+AT+ + + ++ Sbjct: 70 AYTSTWLFVNLGISPWLGMWAGAVVAMGAALVVGLSCLQLRGAYFALATIASCMVLKTLV 129 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + G G+ V + + F Y V L + + Sbjct: 130 ENADTLLGGPRGMEVTLLRDAPLYFQHTG-------------KAFYYLVALAFTVAALLV 176 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + R+ +R++Q A +L + KL+A +S+A + G F+A IS Sbjct: 177 NRHVLRSRFGYCLTAVRNDQDAAMALGVPVRRYKLTAAMLSAAMTALGGTFYAQFVLYIS 236 Query: 258 PDMFKFSENIIVISIV-ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 PD + ++I++V I+GG +L +L+ EL + Sbjct: 237 PDKVFGANLSVIIAVVCIIGGRGTLWGPVLGALLLLPGEELARSLTGGMVG--------- 287 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 L + L +VI + L+ Sbjct: 288 --ADMMLYGLLLMIVIRLEPRGLM 309 >gi|86158603|ref|YP_465388.1| chain amino acid ABC transporter fused ATPase and inner-membrane subunits [Anaeromyxobacter dehalogenans 2CP-C] gi|85775114|gb|ABC81951.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Anaeromyxobacter dehalogenans 2CP-C] Length = 652 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 115/289 (39%), Gaps = 16/289 (5%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 +L A V L + Y + + IY + GL + VG LG ++L Sbjct: 3 RRLLLVRGAEVVLFALLAAVPLAVHNPYALGLLTLLAIYGILLIGLDVTVGYLGQVNLAH 62 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +GAY+ I ++ GL + ++ ++ ++ G ++ LPSL+ G A+ATL Sbjct: 63 AAFLGLGAYTAGIAVTKLGLGLVPVLLLAPTVAFVIGALLALPSLRLEGPQFALATLSFL 122 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + L + + +T G G+ + + Y++ + + Sbjct: 123 ALTTTALNELEWLTAGAQGLSLDRPPLLGHE----------------LSPRDFYWLCMLL 166 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + L + A+ +RD+ A ++ K++AFA S G+AGA +A Sbjct: 167 LACVWVAMRNLLSSQWGRAFEALRDSPIATDAMGVGTYRHKVAAFAFGSGLGGLAGALYA 226 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 + + + P F + I ++ V+LGG SL ++ + L Sbjct: 227 FNFEYLQPQSFVYELTITLLLGVVLGGRKSLWGAFVGATLVALLPNLLS 275 >gi|312879766|ref|ZP_07739566.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] gi|310783057|gb|EFQ23455.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] Length = 353 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 126/335 (37%), Gaps = 45/335 (13%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV------ 82 + Y + I I + A L+++ G G+ SL A+GAY+ Sbjct: 22 WWAEGNLDGYKIQVLNLIAINAILAVSLNLIYGFTGMFSLGHAGFMAVGAYTCALLILPP 81 Query: 83 -------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 S ++ + +++G + + +P L+ GDYL IA+L Sbjct: 82 IQKEMIYILEPLIWPFSALHAPFFVAVLAGGIMAGVFSLFIAMPVLRLGGDYLGIASLGF 141 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 +EI + + PITNG GI + + G Sbjct: 142 AEIIRVVFTNATPITNGALGIKGIP-------------------------DYANLWWNWG 176 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 C L+ +I+ L ++ N + IRD++ A ++ ++ +F V + F G+ GA Sbjct: 177 WCVLTLYVIVRLLKSNFGNCLKAIRDDEVAARAMGIDTFRYRVISFVVGAFFAGVGGALM 236 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + I P MF F V+ IV+ GG+ S++ + ++ ++E + Sbjct: 237 GSLITTIDPKMFTFLLTFNVLMIVVAGGLGSITGSVLGSVVITVLLEWLRFVENPIDLGS 296 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L + +AL L+IL R ++ R Sbjct: 297 LHIP-GIPGMRMVIFSLALLLIILFRREGIMGQRE 330 >gi|257056302|ref|YP_003134134.1| ABC-type branched-chain amino acid transport system, permease component [Saccharomonospora viridis DSM 43017] gi|256586174|gb|ACU97307.1| ABC-type branched-chain amino acid transport system, permease component [Saccharomonospora viridis DSM 43017] Length = 356 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 123/291 (42%), Gaps = 8/291 (2%) Query: 55 GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 GL+++ G G +SL A+GAY+ +L L +++ + ++ G+++G + Sbjct: 62 GLTVLTGLNGQISLGHGALMAVGAYTTALLLRDDDLPFGVVMLAATTLTALVGIVVGAAA 121 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + +G YL ATL ++ + + + + G+ G+ V F Sbjct: 122 ARLKGPYLVGATLALAVGLPGLAVHFDGVLGGEQGLPVNTPRPAQWF----DDAMFFITG 177 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 S + ++ F+ YV G L ++ L WR +RD++ A + A++ A Sbjct: 178 SELGHQKFLAYVAWGTLLLVLLLLANLVAGRYGRVWRAVRDDEVAAALAGIHLGRARILA 237 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F VS+A G+AG+ A +P F ++ +++ V++GG+ SL+ +A+L+ + Sbjct: 238 FVVSAACAGLAGSVLAMVVRLTAPSGFTIVLSLSLLTAVVVGGLGSLTGAVLGSALLVFL 297 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + ++ + I L +L ++ L Sbjct: 298 PPAVTDLGTELGLTAVRAAQLAP----LVYGIVLVAAMLAAPSGVVGLGRR 344 >gi|226364372|ref|YP_002782154.1| branched-chain amino acid ABC transporter permease/ATP-binding protein [Rhodococcus opacus B4] gi|226242861|dbj|BAH53209.1| putative branched-chain amino acid ABC transporter permease/ATP-binding protein [Rhodococcus opacus B4] Length = 607 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 120/292 (41%), Gaps = 15/292 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L+ LFL + I + GL++ +G G L+L YA GAY+ Sbjct: 17 LAVGLVVLFLPEFGLGFALSRQVQLACILALVVSGLNLSLGYAGELALGQAAMYAAGAYT 76 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L I L + S +++ A G++ G+P L+ LA+ + + + +I+ + Sbjct: 77 AGLLSIAGHTDIVLQLAASGLVALAVGIVTGIPGLRLGSWSLAMTSFFLVLLVPDIIAVF 136 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 T G+ G+ + G + + Y V++ + L +++ Sbjct: 137 GDTTGGRNGLSGIEPATLFGEAIDADR---------------FYTVVVIVAILWFAVLRN 181 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + A+RT++ + S+ ++ KL +A+ + G+AGA FA +SP+ Sbjct: 182 LVVSRHGIAFRTLKQSPVLASSVGISVFRMKLLGYAIGAFPAGLAGALFANIDMYVSPEA 241 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 F F+ V++ ILGG TS+ A AI+ Y F Sbjct: 242 FGFTFATAVLAACILGGATSVYGAAVGAAIMQLGPNQSSEFQQYALVFYGGF 293 >gi|241206007|ref|YP_002977103.1| urea ABC transporter permease [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859897|gb|ACS57564.1| urea ABC transporter, permease protein UrtB [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 545 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 95/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY+ ++ + L S + + Sbjct: 266 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYVVQEYITSAFPELADYSLAFAVPAAFVFT 325 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + + + + Sbjct: 326 GFVGLVIERA--VIRYLYGRPLETLLATWGVSLILQQAVRSSFGPTNREVRNPTWMSGV- 382 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + +++L L+R+A R + N++ S+ + Sbjct: 383 FDLGGLSITWNRLWIIVFSMVVFVALLLLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 442 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S G+AG A S+ S I +V+ GG+ +L L Sbjct: 443 AFTFALGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALSL 500 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 V + L+++ + L I R L L+ + Sbjct: 501 GVVNKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 544 >gi|260655230|ref|ZP_05860718.1| branched-chain amino acid ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] gi|260629678|gb|EEX47872.1| branched-chain amino acid ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] Length = 348 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 138/340 (40%), Gaps = 20/340 (5%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + + L ++ + L + + Y + Q + + + G+ ++ +G Sbjct: 1 MNKQRSTGKFAALLLILAVYLVVIPLVFRGHPYFLGVLTQASVLSVISAGVWLMF-YIGR 59 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 +++ IG Y+ IL + GLS WL + ++ A +I+GLP L+ +G Y ++ Sbjct: 60 INIGQGAFALIGGYTAAILMKKIGLSFWLASLGAVAVTVAAAVIVGLPLLRLKGVYFSMI 119 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++E + + +TNG GI + +LI + V + YY Sbjct: 120 TLCLTETARLAAQSFPSLTNGAKGILNIPMPGAVKLGDLTLIP----DFASVDKHLAYYY 175 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + + +++ + + + R++++N+ S + ++ AF + + F G+ Sbjct: 176 LGAVLLLFCFAVLYRVVHSRLGWLLRSLQENEDLASSFGVDVPRLRVIAFGICAVFAGLG 235 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G+FF + + P F ++ + LGG+ S+ T +L E G+N Y Sbjct: 236 GSFFVTLQQCVYPATFTVQDSTYFLLYCFLGGLGSVWGALAGTFVLFLSFEALQGLNQY- 294 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + + ++L + LL LR P Sbjct: 295 --------------QPLIYSLIMIGMMLWLPNGLLSLRLP 320 >gi|302386472|ref|YP_003822294.1| inner-membrane translocator [Clostridium saccharolyticum WM1] gi|302197100|gb|ADL04671.1| inner-membrane translocator [Clostridium saccharolyticum WM1] Length = 358 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 71/334 (21%), Positives = 144/334 (43%), Gaps = 24/334 (7%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + I + + +++ L + A + + + + + IY + A L++ VG LG LSL Sbjct: 16 KSNMITYGIVIAAFIMVQLLVNAGQVSSLMKGLLVPLCIYTIMAVSLNLTVGILGELSLG 75 Query: 70 CVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 +GA+S + G+ + I + A + G+++G+P L+ RGDYL Sbjct: 76 HAGFMCVGAFSSSLFSISMLEAIPNSGIRFFFAILIGAAFAALAGIVVGIPVLRLRGDYL 135 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI +N++ + + L + + Sbjct: 136 AIVTLAFGEIIKNVINVIYIGKDADGLHFSMKNAMALNMEKDGTVILNGAQGITGTPKNS 195 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 + + + + ++ I+L L + A ++RDN+ A S+ I KL AF +S++ Sbjct: 196 TFTIGVILILITLVIVLNLIHSRSGRAIMSVRDNRIAAESIGINITKYKLMAFTISASLA 255 Query: 243 GMAGAFFAASRD--RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AG ++ + + F ++++I+++ V+LGG+ ++ A IL + EL G Sbjct: 256 GVAGVLYSHNLSALTATQKNFGYNQSIMILVFVVLGGIGNIRGSMIAAVILTLLPELLRG 315 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +N Y + + L ++++ Sbjct: 316 LNTY---------------RMLIYAVILIVMMIF 334 >gi|17989219|ref|NP_541852.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid transport ATP-binding protein LIVG [Brucella melitensis bv. 1 str. 16M] gi|17985077|gb|AAL54116.1| high-affinity branched-chain amino acid transport system permease protein livh / high-affinity branched-chain amino acid transport ATP-binding protein livg [Brucella melitensis bv. 1 str. 16M] Length = 916 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 329 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 388 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ G+S W + + A I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 389 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 447 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 448 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 493 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 494 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 553 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + ++GG+ +++ +L+ + E L F Sbjct: 554 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 609 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 610 ------VYGLVLILVVLFMPNGIMG 628 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 92/294 (31%), Gaps = 27/294 (9%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 27 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 86 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L A + + +I + G + Sbjct: 87 LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 135 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + +A R + ++ A + + Sbjct: 136 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGHAIRAVAQHRSAAELMGVNV 195 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 196 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 253 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + + + ++ L+++++ L Sbjct: 254 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 294 >gi|119386725|ref|YP_917780.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119377320|gb|ABL72084.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Paracoccus denitrificans PD1222] Length = 639 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 96/309 (31%), Gaps = 20/309 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 IY + A GL+I G + ++++ +GAY+ + + L + + Sbjct: 350 LDALSLASIYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVAQTLIADRT-LSLVAA 408 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ A G+ + +LA L + I + + G Sbjct: 409 LPLAFAVTFAAGVVLYRLVIRHLAHRPLETLLATFGVSIALQQLAKNIFGTQARP----- 463 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 T + + + V + + + ++RT + R + N Sbjct: 464 -LTAPAWLEGAITVNDVVSISTIRVAIFVLALLFLGLFLFIMKRTRLGLEVRAVTQNPGM 522 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 S+ + F + S G+AG S ++ V++GG+ Sbjct: 523 AASMGINPDRIAMMTFGLGSGIAGIAGVAIGLFAQVTSELGQQYIVQS--FMTVVVGGVG 580 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ ++ + ++ N S + T M++ + + I R + Sbjct: 581 NIWGTLAGAGLIGVLSKVIESFNP-----------SNTLAAQTFMILFIVIFIQFRPRGI 629 Query: 340 LRLRTPSNF 348 + R + Sbjct: 630 IPQRGRAAE 638 >gi|264676230|ref|YP_003276136.1| inner-membrane translocator [Comamonas testosteroni CNB-2] gi|262206742|gb|ACY30840.1| inner-membrane translocator [Comamonas testosteroni CNB-2] Length = 364 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 133/335 (39%), Gaps = 24/335 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + + + + + L Y+ + ++I+I +FA L I+VG GL+ Sbjct: 27 RPIRAKSVWVAVVLPLAVAALLAAAQPFWSAYLSDLVVKIMILSIFALSLHILVGGAGLV 86 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 SL + +GAY+ V + G + +++ + +SG +++G SL+ +G Y + T Sbjct: 87 SLGHAAYFGLGAYAAVKAAGQDGSNFLVMLGAAVGVSGLYALVVGALSLRTKGVYFIMVT 146 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++ G GIY+ R + S Y+V Sbjct: 147 LAF-AQLAFFVVHDVGYFGGSDGIYLMQRPATGALDMESSST--------------QYFV 191 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L L + I LR + +A IR N++ + KL+ F ++ A G+AG Sbjct: 192 VLAALVLVYAFIAMLRHSRFGHALAGIRVNEQRMRAAGFATYGYKLAGFVIAGALAGLAG 251 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 AA ++P++ + + V+ ++ILGG+ SL T + + EL Sbjct: 252 FLLAARDAVVNPELLAWHHSGEVLLMLILGGVGSLRGAVLGTITFVLLKELLST------ 305 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + I++ ++ + L+ Sbjct: 306 ---HAIVGNAADHWQLTLGISIIALVALLPKGLVG 337 >gi|257870224|ref|ZP_05649877.1| branched-chain amino acid transporter [Enterococcus gallinarum EG2] gi|257804388|gb|EEV33210.1| branched-chain amino acid transporter [Enterococcus gallinarum EG2] Length = 328 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 141/341 (41%), Gaps = 42/341 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 KY+ LA V LF + D++ + I I ++ A GL++++G G SL Sbjct: 9 KYNITWLALAAVIYFGLFAAYNGGLINLFSDAIIVNIGINIILAVGLNLIIGFSGQFSLG 68 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ IL + + V +SG +++G+P+L+ +GDYLAIATL Sbjct: 69 HAGFMAIGAYAGAILTANNPTFGGFLSGLIVGMFVSGLIALVVGIPTLRLKGDYLAIATL 128 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +L+ + +TNG AGI+ + ++ Sbjct: 129 GVSEIIRILLVNLRGLTNGPAGIFGLPQFSNWQ-------------------------IV 163 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 S ++ + A IR+++ A ++ K+ AF + + +AG Sbjct: 164 FLFAVGSILVVSNFIHSGPGRATLAIREDEIAAEAMGVNTTKYKVIAFVMGAVMASIAGT 223 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A+ + + P + F ++I V+ IV+ GG+ S + + +L + G Sbjct: 224 LYASYQQSVFPKDYGFMKSIDVLIIVVFGGIGSTTGAVVSAVVLGILNMYLQGF------ 277 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + +AL +++ + LL S Sbjct: 278 ---------SDLRMIIYALALIAIMIFKPSGLLGTWEFSVK 309 >gi|254453705|ref|ZP_05067142.1| inner-membrane translocator [Octadecabacter antarcticus 238] gi|198268111|gb|EDY92381.1| inner-membrane translocator [Octadecabacter antarcticus 238] Length = 296 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 126/293 (43%), Gaps = 16/293 (5%) Query: 50 VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109 ++ A L++ G G+++ YA+GAY+ +L ++ G + + IP + ++ G + Sbjct: 1 MILALALNLQWGLTGMVNFGIAGFYALGAYTSGLLSAKAGWPLGVTIPAAVLVGLVAGGL 60 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + L S++ R D+LA+ TL + E+ + +L+ IT G G+ + + + +V S Sbjct: 61 VALLSMRLREDFLAVVTLGVGEMIRLVLLNEDQITEGPRGLRIEAQPFRDMISVDS---- 116 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 Y F ++ + I +R++ + R IR++ L + Sbjct: 117 ---------YPFFYLCLVALSVAVIFLICERIRKSPMGRTLRAIREDDVVAGVLGKNVFR 167 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 ++ FA+ F+G+AGA +A ISP++F + + VI+GG + + Sbjct: 168 HRVQIFALGGGFMGLAGALYAHYTQNISPEVFMPMVAMFIWMSVIVGGAGNNRGLLIGAG 227 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +I +E + + + + + L + + +R LL Sbjct: 228 TVIMFLEGTRFIGD---VAPWLDAEKMSSLRIITIGMLLIVTLRVRPRGLLPE 277 >gi|126737449|ref|ZP_01753184.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] gi|126722034|gb|EBA18737.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] Length = 361 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 68/325 (20%), Positives = 130/325 (40%), Gaps = 17/325 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V LL F ++ +LI+ + GL ++ G G SL A+G Sbjct: 22 LGVYAALLALAFALPYLIDEFYLGEVTNVLIWAIAGLGLMLLTGQTGQASLGHAAFLAVG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ IL + + P++ +I+G G I+ +P+L+ G YLAIAT+ +S + +I+ Sbjct: 82 CYTNTILIEQGLP-FVIAFPLAGVITGVIGTIVAIPALRLHGIYLAIATIALSILADDII 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + +P T G +G +I F F YY++L + Sbjct: 141 VLMEPWTGGVSGK------------FPEMITIFGFEIERWTMPSRFYYLVLVVTICCTLF 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R+ + A+ +RD++ + ++ I K +AF +S G AGA + Sbjct: 189 YRNLLRSPLGRAFAAVRDSEVSATAMGVHIARTKATAFGLSCMITGWAGALMGYYAGTFN 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + F +I ++ ++++GG+ S+ ++ + + + + Sbjct: 249 NETFSIVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQALSILKDGLVGGGVAI----P 304 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 T + + L L IL + Sbjct: 305 GLETGVFGMILILFILFEPMGIYGR 329 >gi|126665940|ref|ZP_01736921.1| inner-membrane translocator [Marinobacter sp. ELB17] gi|126629874|gb|EBA00491.1| inner-membrane translocator [Marinobacter sp. ELB17] Length = 347 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 15/311 (4%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + Y+ +G + I V+ GL+I+ G GL+SL +G Y+ L G Sbjct: 35 IFPFMADSYLMYLGCLVGIAVISTTGLNILTGFTGLISLGQAGFMGVGGYTVAWLSMNTG 94 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + + ++ +++ A G+++GLPSL+ +G YLAIATL S I +W+ +T G G Sbjct: 95 LPFPVTLLLAGLLAAAVGILVGLPSLRVKGLYLAIATLAASVFLHFIFAEWESVTGGMGG 154 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + F T Y++++ + L + RT I A Sbjct: 155 LSLEPAHLFGLTFQTDFAM---------------YFIIVPLAVLMVLAAKNVFRTRIGRA 199 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + IRD + L ++ KL +FA+SS + G+AG FA ++P+ F S +I Sbjct: 200 FIAIRDRDISAEILGINLLHYKLMSFALSSFYAGVAGGLFAYFFRVVTPESFPLSMSIFY 259 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++ VI+GGM +L A + + E+ + + + + Sbjct: 260 LAAVIVGGMGNLLGGILGAAFMTLIPEVLQLLTAALTPFYPNAPIFMSPMLEIIFGALIV 319 Query: 330 LVILMRSHSLL 340 ++ H L Sbjct: 320 GFLIFEPHGLA 330 >gi|327462073|gb|EGF08402.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1057] Length = 317 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LL+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNIFWLSLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + V A+I+G + +GLP+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLVGAVIAGIVALAVGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K++AF + + +AG+ Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305 >gi|284046344|ref|YP_003396684.1| inner-membrane translocator [Conexibacter woesei DSM 14684] gi|283950565|gb|ADB53309.1| inner-membrane translocator [Conexibacter woesei DSM 14684] Length = 320 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 9/324 (2%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 +L + L A S + +G+ Y +F GL + VG G+++ AIGAY IL Sbjct: 4 VLAVSLDALTSADFWIGVGVLAGTYAIFTLGLQLNVGFTGIINFGQAGFMAIGAYGMGIL 63 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 R G S+W +PV+ +++ A G+++GLPSL+ R DY AI T+ +EI + + + +T Sbjct: 64 VVRAGWSLWAALPVATLMAMAAGVLIGLPSLRLRADYFAIVTIAFAEIVRYVAQNARGLT 123 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G+ V I + S + + + V+ + ++ L+R+ Sbjct: 124 GGNQGLL---GFDDQWLDVSDTILGWLPESMQEQFLLPLLLVVWATVAILTVLLKLLQRS 180 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 R IR+++ A +L ++ KL + A+++A +AG F A + +SP+ F+ Sbjct: 181 PWGRVLRAIREDEDAARALGKNVLAYKLQSIALAAALGAIAGYFLALNLSFLSPEEFEPQ 240 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 I +I+ILGG+ S +A A+ I+ ++E ++ + ++ Sbjct: 241 FTFIGFTILILGGLASYVGVALASVIIWALLEATRFVDLPLAAEKVA------ALRFIIV 294 Query: 325 VIALFLVILMRSHSLLRLRTPSNF 348 +AL L++ R LL R Sbjct: 295 GVALILLVAFRPQGLLGKREEMVL 318 >gi|332367223|gb|EGJ44958.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1059] Length = 317 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 82/340 (24%), Positives = 147/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LL+ + + A + + QI I ++ A GL++VVG G SL Sbjct: 6 KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLVVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + A+I+G + +GLP+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALAVGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K++AF + + +AG+ Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305 >gi|99079959|ref|YP_612113.1| inner-membrane translocator [Ruegeria sp. TM1040] gi|99036239|gb|ABF62851.1| inner-membrane translocator [Ruegeria sp. TM1040] Length = 358 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 140/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y L L F + + +++++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYAVLA------LAFGVVPFVVNDYWVNAILLPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ + ++ I+ ++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVLLAGGITALVCVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDVFGIIITGPNAPAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L A + L R W IRD A + + AK++AFAVS F+ Sbjct: 185 TYLFCLIFLTFCAIVARNLTRGTQGRTWMAIRDMDIAAEIIGVNPLKAKMTAFAVSGFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F +++ +V+ +VI+GG+ S+ A L+ + + Sbjct: 245 GISGALFFAVYLGAVEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVILKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + F ++ + +++ H L +L Sbjct: 305 VGVDWLGWPTDIVAHF---QLVIVGALIITFLILEPHGLAQLWR 345 >gi|160940517|ref|ZP_02087861.1| hypothetical protein CLOBOL_05412 [Clostridium bolteae ATCC BAA-613] gi|158436477|gb|EDP14244.1| hypothetical protein CLOBOL_05412 [Clostridium bolteae ATCC BAA-613] Length = 331 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 119/315 (37%), Gaps = 24/315 (7%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + Y+ S+ + + SI+ G G +SL +GAY +L Sbjct: 19 AAVIPVFVRTPYLLSICVMTFYMASASLAWSILGGLTGQISLGHASFMGLGAYMSTLLLV 78 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + +S W+ IP+ + GA ++ P RG Y ++ T+ E F+N++ W G Sbjct: 79 KLNVSPWISIPLVFLFVGALTALLLSPCFVLRGPYFSLVTIAFGEAFRNLMTNWDFAGKG 138 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + + ++ +Y+ L M I+ + R+ Sbjct: 139 QG--------------LLLPFGDNSLALLRFKSKVPYFYLSLLMVIAVYLIVRAIDRSKF 184 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A +T+R+++ ++ + K+ A VS I + G F+A I+PD+ +++ Sbjct: 185 GYALKTVREDEDTANAIGINPLKYKVLATFVSCGLIAVCGVFYANYIRFINPDIMIQAQS 244 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + + ++GG+ S++ IL + + + + I Sbjct: 245 VEFVLPAVIGGIGSVTGPLIGAIILTPLAQYLNS----------TLSSIAPGANLLVYAI 294 Query: 327 ALFLVILMRSHSLLR 341 L +VIL + ++ Sbjct: 295 ILIVVILFQPRGIMG 309 >gi|323351068|ref|ZP_08086725.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis VMC66] gi|322122792|gb|EFX94501.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis VMC66] gi|325687064|gb|EGD29087.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK72] Length = 317 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LL+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KINIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + A+I+G + +GLP+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALAVGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K++AF + + +AG+ Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305 >gi|218295360|ref|ZP_03496173.1| inner-membrane translocator [Thermus aquaticus Y51MC23] gi|218243992|gb|EED10518.1| inner-membrane translocator [Thermus aquaticus Y51MC23] Length = 355 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 65/306 (21%), Positives = 123/306 (40%), Gaps = 21/306 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + + I + A GL ++VG G +SL +GAY+ L L I Sbjct: 56 PYPMYVATLVAIGALSALGLHLLVGGAGQISLGHAAFMGVGAYAASHLAGPLAP---LGI 112 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + I+ G+++GLP+L+ +G YLAIATL + + W+ +T G G + Sbjct: 113 LLGGGIAALLGLLLGLPALRIKGVYLAIATLAFQFLADYVFKNWEAVTGGIRGRTLPPAE 172 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F ++ + + +L+ T A+ +RDN Sbjct: 173 LFGIPLDSPERLWYLVLLFLLPLFFYGKRLLM---------------TRTGRAFMAVRDN 217 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + KL AFA+S+ + G+AG A ++P+ F S +I +++VI+G Sbjct: 218 DLSARVAGVDLTRVKLFAFALSAFYAGVAGGLLAQLYKAVTPEYFPLSVSIQYLAMVIVG 277 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G ++ ++ + E+ N Y ++ + L + + +++ Sbjct: 278 GAGTVLGAILGAFFVLLIPEVL---NSYVGALGPQYAAALAAWRNVLFGLLILAFLILEP 334 Query: 337 HSLLRL 342 L+ L Sbjct: 335 LGLVGL 340 >gi|229818484|ref|ZP_04448765.1| hypothetical protein BIFANG_03792 [Bifidobacterium angulatum DSM 20098] gi|229784354|gb|EEP20468.1| hypothetical protein BIFANG_03792 [Bifidobacterium angulatum DSM 20098] Length = 357 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 75/351 (21%), Positives = 142/351 (40%), Gaps = 42/351 (11%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L + + + + VV +L Y+ + + I V+ L++ +G LG Sbjct: 6 LSIKQSYLVCAVGIVVLFGILMGVCETGAVSLYVKGVIMTCCIAVIMTTSLNLTIGVLGQ 65 Query: 66 LSLNCVIAYAIGAYSYVILG---------SRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 L+L C AIGAYS ++ + L+ V +++ G+++G+P+L+ Sbjct: 66 LTLGCCGFEAIGAYSAALVSKLLVANGVVMNDTVRFLLVTVVGGLVACVFGVLIGIPALR 125 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 GDYLAI TL EI + I+ K L + + + Sbjct: 126 LHGDYLAIITLGFGEIIRVIIQNLKVAGG------------------EGLDKGQQGQALI 167 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 I + YV+ + ++ ++ R+ A + IRD++ A + + + K+ FA Sbjct: 168 GIDRLANLYVVFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAASASGINVTYMKVLVFA 227 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S+ F G+AG FA ++P M + ++I + +V+ GGM SL+ + L + E Sbjct: 228 ISAFFAGIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVSAIGLTILPE 287 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L + Y + + L L+++ R + S Sbjct: 288 LLRAFSDY---------------RMLVYSVVLVLIMIFRPQGIFGNWEFSL 323 >gi|167628618|ref|YP_001679117.1| branched-chain amino acid abc transporter, permease protein [Heliobacterium modesticaldum Ice1] gi|167591358|gb|ABZ83106.1| branched-chain amino acid abc transporter, permease protein [Heliobacterium modesticaldum Ice1] Length = 330 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 76/346 (21%), Positives = 133/346 (38%), Gaps = 41/346 (11%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MS LN + I+ + +++ + L Y I I ++ A L+I+ Sbjct: 1 MSGVKKLLNLPNLIVAAVLLLFYGFVSFGLELGFIDDYYKLNLFLICINIILATSLNIIN 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G S+ AIGAY I+ + G + I V A+ + G ++G+P+L+ +GD Sbjct: 61 GMTGQFSIGHAGFMAIGAYGSAIMTMKLGYPFPVGILVGALAAAIAGFLVGMPTLRLKGD 120 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLAIATL EI + I++ + + I + Sbjct: 121 YLAIATLGFGEIIRVIILNIEYVGGAA--------------------------GLNGISQ 154 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + L + + II + A IR+N+ A ++ I K+ AF + + Sbjct: 155 FTSWEWLFFLTVATVLIIKNFMTSTHGRACIAIRENEIAAETMGIDITRYKVIAFTMGAF 214 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G+AG+ A I P F F ++ ++ V+LGG+ SL+ + L + Sbjct: 215 FAGIAGSLHAHYFYTIQPTTFGFMKSFDILVFVVLGGLGSLTGSVISAIALTILSAFLQE 274 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + L +V+L+R L+ S Sbjct: 275 YAE---------------LRMVIYSLLLVIVMLVRPQGLMGTAEFS 305 >gi|307544862|ref|YP_003897341.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216886|emb|CBV42156.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 533 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 100/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+I G +G++++ +GAY+ + L + ++ Sbjct: 248 LSLGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWAMQQLLPGQPGLALLLAIPA 307 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + G+ + +L L + +L + + + Sbjct: 308 GFLVAALAGVAIERGVIQFLKGRPL------ETLLATFGVSLILQQLVRTVISPQNRTVV 361 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + YVL + A+++L +RRT + R + N+ + Sbjct: 362 TPEWMSGSLMLNEGLSLTLNRLYVLGFALVVFAALMLVMRRTRLGLEVRAVTQNRGMARA 421 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + FA+ S G+AG + + + I +V+ GG+ +L Sbjct: 422 MGIRATRVDILTFALGSGVAGLAGVALSQLTNV--GPNLGQNYIIDSFMVVVFGGVGNLW 479 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L + ++ + ++++ + L I R L Sbjct: 480 GTLVAGLSLGVINQVLEPWAGAVLAT-------------IVVLVFIILFIQKRPRGLFPQ 526 Query: 343 RTPSNF 348 + + Sbjct: 527 KGRAAE 532 >gi|115525212|ref|YP_782123.1| ABC transporter related [Rhodopseudomonas palustris BisA53] gi|115519159|gb|ABJ07143.1| ABC transporter related [Rhodopseudomonas palustris BisA53] Length = 584 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 115/299 (38%), Gaps = 22/299 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ I + + A GL ++ G GL S +GAY+ + G+S WL + ++ Sbjct: 26 TLMNFIGLSAIVALGLVLMTGFGGLTSFGQAAFVGVGAYAAAWTTTSAGMSPWLGLLLAL 85 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + +G +L+ G +L ++T+ + + + GI + G Sbjct: 86 TATALLAAFLGAITLRLGGHFLPLSTIAWGLAIYFLFAEIPGL-GQHDGIKDIPPITLFG 144 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + S R +YY++ + L+ +++ L + A R++R Sbjct: 145 LSFASNDR--------------IYYIIWLLLGLAMALVANLLDSRKGRAIRSLRGGAVLL 190 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 SL + +L F +++ G++G +A +SP F+ +I + + ++GG S Sbjct: 191 ASLGINQMRIRLYIFIIAAMLAGISGWLYAHMTRFVSPSPFEIRPSIEYLLMALVGGARS 250 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + A++I + Y N+ T + + L L++ L Sbjct: 251 IYGAVVGAALVILAKNSIEDLLPYLTNNA-------GQLQTVVFSVFLVLILQHARGGL 302 >gi|254509902|ref|ZP_05121969.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] gi|221533613|gb|EEE36601.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] Length = 365 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 66/325 (20%), Positives = 133/325 (40%), Gaps = 13/325 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + LL + + +L++ + GL I+ G G SL A+G Sbjct: 22 LCLYLILLAMVAAAPWWLDDFYLGELTNVLVWAIAGLGLMILTGHTGQASLGHAAFLAVG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 YS VIL L P++ +++G G+ + +P+L+ G YLAI TL +S + +I+ Sbjct: 82 CYSNVILIEAGVP-FLLAFPLAGLLTGIAGVTVAIPALRLHGIYLAIFTLALSVLMDDII 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + +PIT G AG Y + F ++++LG+ + Sbjct: 141 VLAEPITGGVAGKY------------LGGVEIFGHLVDRWGTPDQFFWLVLGVAVIVTLG 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ + ++ +RD++ + ++ I K+ +FA+S A G+AGA + Sbjct: 189 YINLLRSPLGRSFIAVRDSEVSAQAMGVDIARTKMISFALSCAVTGLAGALMGLYAGAFN 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + F +I ++ ++++GG+ S+ ++ + + Y + + Sbjct: 249 NETFSVIISIQLLMMIVIGGLGSIHGAFLGAIVIGFLPQFLSISKEYVGAIIGSNTVAIP 308 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + + L IL + Sbjct: 309 GLEFGIFGVILIAFILFEPMGMYGR 333 >gi|160895710|ref|YP_001561292.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160361294|gb|ABX32907.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 324 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 128/324 (39%), Gaps = 28/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L + Y ++ I+ + GL+++ G G L+L A G Sbjct: 9 VAWGLLLAAGIAFPWLAGNDYHLTVMSTAYIFAIATLGLNLITGYTGQLNLAHAGFMAAG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL +G W + +S ++ G ++G+ SL+ +G Y +I TL + I ++ Sbjct: 69 AYTVGILTVDHGWPFWGGLVMSGVVCAVLGYLIGIVSLRLKGHYFSIFTLCVGYIMFLVI 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G GI + + +YY++L S + Sbjct: 129 EKWEGLTHGTVGIMGIPAPE-------------ALGALSFESPLALYYLVLAFLVASVWV 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + R+ + + IR++ + +L ++ K+ AF +S + G+AG +A I Sbjct: 176 MRRIVRSLLGRTFMAIRNSDELAEALGINLMRNKVLAFMLSVVYAGVAGGLYAGFVRFIG 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PDM ++ ++GGM ++ + + + + Y Sbjct: 236 PDMAGVHHTFDMMIFAMVGGMGTVLGPLLGAIGMPWITQYLQFLQEY------------- 282 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + L ++++ + ++ Sbjct: 283 --RFIVFGPILVMLVIFMPYGVVG 304 >gi|224372151|ref|YP_002606523.1| abc transport system permease protein [Nautilia profundicola AmH] gi|223589478|gb|ACM93214.1| abc transport system permease protein [Nautilia profundicola AmH] Length = 350 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 70/355 (19%), Positives = 136/355 (38%), Gaps = 47/355 (13%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + AV L FL++ Y ++ + I+++ A +++ G G SL A Sbjct: 19 IIAAVTAVFLGFLYISPNLFNDYTITVLGNVYIFIILAVSYNLINGVTGQFSLEPNGFVA 78 Query: 76 IGAYSYVILGSR--------------------YGLSIWLLIPVSAMISGACGMIMGLPSL 115 IGAY +L + + + + +S ++S + + P Sbjct: 79 IGAYVTALLMLSPEVKADMYMIADPYPFIKDIFLPNPFFTLIISGIVSALVALTLAFPVF 138 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + RGDYLAI TL I + LI I+NG G+ Sbjct: 139 RVRGDYLAIVTLGFGFIIRIFLINNPEISNGSMGLDSIP--------------------- 177 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 Y+ + ++ ++ + + A + +RD++ A ++ K AF Sbjct: 178 ----GFASYFWIGFTALVTIVLVYNIVYSKYGRAMKAVRDDEDAALAMGVNTFKTKTLAF 233 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 S+ F G+ G A+S ISPD F F ++ I++LGG+ S+S T + IG + Sbjct: 234 MTSAFFEGVGGGLLASSIGSISPDQFTFMLTFQLLIIIVLGGLGSMSGAIIGTLLFIGGM 293 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 E+ ++ ++ + + + L ++L L + ++++ Sbjct: 294 EVLRPLDDATWS--IGPVHGIPGLRMVVFSLILLGIMLFARKGLFGDKEIWDYVK 346 >gi|239617488|ref|YP_002940810.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1] gi|239506319|gb|ACR79806.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1] Length = 355 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 121/345 (35%), Gaps = 9/345 (2%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 S+RL+K ++ + + + L L+L Y + I IY + A L+++ G Sbjct: 1 MSVRLSKRVNLILTITFLLFIALLLYLADGNLNTYYVRIISLIGIYGIMAVSLTLINGIT 60 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G+ SL AIGAY+ +L I + I LP+ G L Sbjct: 61 GIFSLGHAGFMAIGAYTSALLTMSVQQKEMTFILDKLIWPFNSIQIPFLPATLIGG--LV 118 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 A + ++ + + G R+ L + I Sbjct: 119 AAGFAFLIGWPSLRLSGDYLAITTLGFSEIIRILALNLRSVT----NGALGLKGIPTYTN 174 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 + G F++ I L ++ A + IR+++ A S+ + +L AF V F G Sbjct: 175 VWWAWGWLFVTVLFIASLVNSSYGRALKAIREDRVAAESMGINVFRHQLMAFVVGGFFAG 234 Query: 244 MAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 +AG+ +A I P + ++++GG+ S+S A+ + E + Sbjct: 235 IAGSLYAHWLSTIDPRTTTIGVLLTFNALIMIVIGGLGSISGAIIGAALFAFLTEWLRFL 294 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 +F ++ +V++ ++ + Sbjct: 295 EESIKIFSFEFS-GIPGMRMLVLSALFVIVMIFWPRGIMGKNELT 338 >gi|192292197|ref|YP_001992802.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192285946|gb|ACF02327.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 406 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 122/349 (34%), Gaps = 14/349 (4%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ + L ++ + T + + IY +FA G +I+ G G Sbjct: 1 MKHTSKFADMALFLGFAGVVALGPVIFTPIGAGYPDLLQKFAIYGIFAIGFNILFGLTGY 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LS +G+Y+ V + + + S ++G + +G SL+ G Y +I Sbjct: 61 LSFGHAAFLGVGSYAAVWSFKLVSMDLLPAVAFSVFLAGLLALAIGFISLRRSGIYFSIL 120 Query: 126 TLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL +++ N+ PITNG+ G+ V + I + Sbjct: 121 TLAFAQMCYNMAYSVLTPITNGETGLRVLRNDPRYLDAAFGYVSPMPSLLGLQITSWTGF 180 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y+ + + + + R+ R I+ NQ LSAF +S F G+ Sbjct: 181 YICGAALVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYHSRPYLLSAFVISGMFAGL 240 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA AA+ + +++ + V+ + +LGG +L T ++ + N Sbjct: 241 AGALLAATDPLAGAERMQWTASGEVVLMTVLGGAGTLLGPVLGTGLIKYFENIFSAYNEQ 300 Query: 305 YFNSLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340 ++ F + + V++ ++ Sbjct: 301 QLTAVFSFEPDSLREGLVKTLSLFVGEGWQLTLGLLFMAVVIFLPGGIM 349 >gi|270262013|ref|ZP_06190285.1| hypothetical protein SOD_b02200 [Serratia odorifera 4Rx13] gi|270043889|gb|EFA16981.1| hypothetical protein SOD_b02200 [Serratia odorifera 4Rx13] Length = 370 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 91/349 (26%), Positives = 148/349 (42%), Gaps = 17/349 (4%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 L + + LLL +L Y + L+Y+M A GL+IVVG GLL + + Sbjct: 15 RARLGVALFMLGLLLAPWLAGAAGGNYWVRVIDFALLYLMLALGLNIVVGLTGLLDMGFI 74 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSA----------------MISGACGMIMGLPSL 115 YA+GAY +L S + + L+ +++ CG+++G P+L Sbjct: 75 AFYAVGAYLTALLSSPHLTEQFPLLLHWFPDGLHLSILLLIPLSAVLAALCGILLGAPTL 134 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + RGDYLAI TL EI + ++ N G + + + Sbjct: 135 RLRGDYLAIVTLGFGEIVRILMRNLDRPVNITNGPKGISGIDPVSLFGLKFSGMHEWFGI 194 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 YY+ + I L L+ + + AW IR+++ A ++ KL AF Sbjct: 195 RFSSLYLYYYLFAALLLAILFICLRLQHSRVGRAWTAIREDEDAARAMGINTRNFKLLAF 254 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 A+ + F G+AGA FAA + +SP+ F E+I V+++V+LGGM + + +L + Sbjct: 255 AIGATFGGIAGALFAAFQGFVSPESFTLQESIAVLAMVVLGGMGHIPGVILGALLLAALP 314 Query: 296 ELCCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 EL +L + +AL LV+L R L R Sbjct: 315 ELLRSTMGPLQQALFGQVWIDPEIIRQLFYGLALILVMLYRPAGLWPAR 363 >gi|327470485|gb|EGF15941.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK330] gi|328946909|gb|EGG41046.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1087] gi|332359072|gb|EGJ36893.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK49] Length = 317 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LL+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KINIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + A+I+G +++GLP+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALVVGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K++AF + + +AG+ Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305 >gi|282864544|ref|ZP_06273599.1| inner-membrane translocator [Streptomyces sp. ACTE] gi|282560483|gb|EFB66030.1| inner-membrane translocator [Streptomyces sp. ACTE] Length = 368 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 128/327 (39%), Gaps = 16/327 (4%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY---------- 81 ++ G+ + + A GL+++ GS G LS+ A+GAY Y Sbjct: 41 PFYLDRFWLQAGLFAMAAAIGAIGLNLLTGSTGQLSMGHAFFLAVGAYGYCVLAGESSTQ 100 Query: 82 -VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 S GL WL ++ +++GA G + + + RG YL IATL + I Q++L Sbjct: 101 NGHALSGLGLPTWLAAVLAVLLAGAAGGLFSPIAGRLRGAYLGIATLALIFIGQHVLFNA 160 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G G V F T + P ++Y L +SA Sbjct: 161 GSLTGGFNGRPVPPFSLFGFTFDDTETVVAAVPFHSFEK---LWYAALPALAVSAYFARG 217 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + R A IRD++ A + + F +SS + G+AG A R P+ Sbjct: 218 VLRGRPGRALNAIRDHRIAAGVTGVPVARYRAGVFVLSSMYAGLAGVLLALVFQRTVPEY 277 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNM 318 F ++ ++++++GG+ S++ A + + ++ + ++ + Sbjct: 278 FGMVLSLEYLAMIVIGGLGSVAGAVVGAAFVSLLPQVLTHYSDSLPLVSAPGTGGVAPGE 337 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 L A+ V+L L R + P Sbjct: 338 ASRYLYGAAVVAVVLFLPGGLTRPKKP 364 >gi|46201172|ref|ZP_00055635.2| COG4177: ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 312 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 71/332 (21%), Positives = 130/332 (39%), Gaps = 30/332 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + S Y +G+ + + GL++++G G +SL +A+GAY Sbjct: 8 LAALAIFITVAPLGFSNSYFYDVGVNAMFNAILCVGLNLLIGYAGQISLGHAGFFALGAY 67 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 IL RYG+ + +SA + G ++ P LK +G YLA+ATL + I +L Sbjct: 68 GSGILTERYGMPAIGALVLSASVVGVLAFVVARPILKLKGHYLAMATLGIGIIIHIVLKT 127 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 IT G G+ V + T + Y+V + L+ + L Sbjct: 128 EAGITGGPDGMSVGNFKMLGFTVKGDQMW---------------YWVTGVLLVLAVWLSL 172 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L ++ + A R + ++ + K+ F VS+ F + G+ FA I+PD Sbjct: 173 NLIQSPVGRALRAVHGSEVGAEVVGVDTSSYKVLVFVVSAVFASIVGSLFAHKNGFITPD 232 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + F ++ ++++V+LGGM S+ IL + +L + Y Sbjct: 233 ISSFFHSVELVTMVVLGGMASIYGALIGAVILTLLPQLLAAVEQY--------------- 277 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + ++ LL S Sbjct: 278 EAMILGAIMMGTMIFMPKGLLPSLLASLKRRE 309 >gi|332358287|gb|EGJ36113.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK355] Length = 317 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LL+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + A+I+G + +GLP+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAVIAGIVALAVGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K++AF + + +AG+ Sbjct: 161 YAFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305 >gi|325696299|gb|EGD38190.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK160] Length = 317 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LL+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + A+I+G + +GLP+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALAVGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K++AF + + +AG+ Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305 >gi|149377725|ref|ZP_01895460.1| ABC-type branched-chain amino acid transport system [Marinobacter algicola DG893] gi|149358010|gb|EDM46497.1| ABC-type branched-chain amino acid transport system [Marinobacter algicola DG893] Length = 335 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 69/312 (22%), Positives = 123/312 (39%), Gaps = 17/312 (5%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 A + + IQ+ I GL+++VG G +SL + +GAY I YG Sbjct: 24 PAFLGNPFHYELVIQMAIIAATVVGLNLLVGFAGQISLGHAGFFGLGAYFTGIATGTYGW 83 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + V A++ G ++G P L+ +G YL++ATL + I IL + IT G G+ Sbjct: 84 SSLPALVVGAVVVGTIAWLVGRPILRLKGHYLSMATLAVGFIIAIILNNERAITGGPDGM 143 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V L S + + Y + + + L L + I A Sbjct: 144 PV--PALDLFGWELSTFGRYSLFGIEISGVQAWYILASVVLLAAVWFALNLIESPIGRAL 201 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R++ ++ A + K F +S+ + + G +A + I+P + F +I+ I Sbjct: 202 RSVHGSEVAASVVGVDTAKYKSLVFVISAIYASVMGGLYAHFQGFITPAVASFEFSILFI 261 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++V+LGGM S + +L + ++ T + + L L Sbjct: 262 TMVVLGGMGSTFGVILGAVVLKLLPQVLADFQE---------------LETVMFGLILML 306 Query: 331 VILMRSHSLLRL 342 ++ LL Sbjct: 307 TMIFMPKGLLPT 318 >gi|91976046|ref|YP_568705.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91682502|gb|ABE38804.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 357 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 149/343 (43%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF R ++ I+ ++ + + Y S+ IQI I+ + A GL+I+VG Sbjct: 21 TIFPTRTSRNAAIVGVVLICFA--------PLVLSGYWLSVLIQIGIFGIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +S+ + +GAY+ L + + ++ IP++ +I+ G++ GLP+ + +G Y Sbjct: 73 FTGQISIGHAAFFLLGAYTSAYLNNTLPIPVFFTIPLAGVITALVGLVFGLPAARLKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L IATL I + + + + G F T Sbjct: 133 LVIATLAAQYILIDFFSRAEWFSGGSVPASANPFSIFGYTLRGDKSY------------- 179 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +YV+L +S ++ L RT A +RD+ + + + + +F +++ F Sbjct: 180 --FYVVLAYLLVSYLLVTNLMRTRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFF 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA +A + +S + F +I+ ++++I+GG+ S+S TA ++ + E + Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPEAMEWI 297 Query: 302 N----FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + +L+ + + + + + ++ L Sbjct: 298 SMELKGGAIDRVLQLNNNLTFLREIAIGLIIIAFLVFEPDGLA 340 >gi|87120262|ref|ZP_01076157.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Marinomonas sp. MED121] gi|86164365|gb|EAQ65635.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Marinomonas sp. MED121] Length = 558 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 98/297 (32%), Gaps = 21/297 (7%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 + GL+I G +G++++ +GAY+ ++ I + V+ + +MG Sbjct: 283 ASIGLAITFGVMGVINMAHGEMIMLGAYTTYVVQLLMPNHIDYSLWVAIPAAFMVSGLMG 342 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + +L L + +L + + + S + Sbjct: 343 VIIERGVIRHLHGRPL------ETLLATFGISLILQQLVRSVFSPLNRQVFSPSWMTGSL 396 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + + + Y+L + +++ LR+T++ R + N+ ++ + Sbjct: 397 EINPVLSLTLNRLYILAFALIVFFALLTLLRKTSLGLNVRAVSQNRNMAKAMGVKTGWVD 456 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG + + + I +V+ GG+ +L A L Sbjct: 457 AMTFGLGSGIAGIAGVALSQLTNV--GPNLGQAYIIDSFMVVVFGGVGNLFGTLVAAFSL 514 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + M + ++++ + L I R L + + Sbjct: 515 GIATKFLEPMTGAVLAA-------------IIVLVFIILFIQKRPKGLFPQKGRAAE 558 >gi|317484398|ref|ZP_07943314.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] gi|316924350|gb|EFV45520.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] Length = 333 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 81/317 (25%), Positives = 138/317 (43%), Gaps = 31/317 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + + + +Y + A L++++G G+ + YA+GAY IL + Y + I LL Sbjct: 24 NTYWTEVAVNVGLYALLALSLNVILGQAGIFHMGHAAFYAVGAYVTAILNTHYQIPILLL 83 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPITNGKAGIYVAD 154 IPV+ + +I+ P + RGDYL I T+ + EI + LI +T G GI+ Sbjct: 84 IPVAGAAAALFALIVARPIIHLRGDYLLIVTIGIVEIVRIALINDVFGLTGGANGIFGIA 143 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 R G +R I YY++ M L+ + WL + A I+ Sbjct: 144 RPELFGIKIRKA--------------IQFYYLIWIMVGLTVLLFHWLSESRFGRALNCIK 189 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++ A + KL AF + + + GMAG FAA ISP F F E+++V ++VI Sbjct: 190 EDDTAAEGCGMDVAHLKLMAFVIGAFWAGMAGNLFAAKMTIISPSSFTFWESVVVFAVVI 249 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 L G S + T +++ + E+ F + +A+ +++++ Sbjct: 250 LSG-GSQIGVLLGTFLIVALPEMFR---------------DFASARMLVFGLAMMIMMVV 293 Query: 335 RSHSLLRLRTPSNFLER 351 R LL + R Sbjct: 294 RPQGLLPPSPRRYDVRR 310 >gi|323692013|ref|ZP_08106261.1| hypothetical protein HMPREF9475_01124 [Clostridium symbiosum WAL-14673] gi|323503936|gb|EGB19750.1| hypothetical protein HMPREF9475_01124 [Clostridium symbiosum WAL-14673] Length = 354 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 78/343 (22%), Positives = 148/343 (43%), Gaps = 24/343 (6%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + ++ + I L + LL+ + + + + + + YV+ A L++ V Sbjct: 1 MKSYKNKILIQNTITYALVIAAFLLIQILMAGGNINSLLKGILVPLCTYVILAVSLNLTV 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLP 113 G LG LSL +GA+S L + + V A+++ A G+++G+P Sbjct: 61 GILGELSLGHAGFMCVGAFSGAFFTHVMAASIPNPQLRFIIALFVGAVVAAAFGILIGIP 120 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L+ +GDYLAI TL EI +N++ T+ + L + Sbjct: 121 VLRLKGDYLAIVTLAFGEIIKNVINVLYVGTDASGIHISTKDVASLNLAEGGKVIIKGAQ 180 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 ++ + + + ++ I+L + + A IRDN+ A S+ I KL Sbjct: 181 GITGTPKMATFTIGFILVLITLFIVLNMINSRTGRAIMAIRDNRIAAESIGINITKYKLL 240 Query: 234 AFAVSSAFIGMAGAFFAASRDR--ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 AF+VS+A G+AG +A + +P F ++ +I+++ V+LGG+ ++ A IL Sbjct: 241 AFSVSAALAGVAGVLYAHNLATLAATPKSFGYNMSIMILVFVVLGGIGNIRGSVIAAVIL 300 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + E+ G+N Y + I L +++L+ Sbjct: 301 TLLPEMLRGLNNY---------------RMLIYAIVLIVMMLL 328 >gi|90414544|ref|ZP_01222518.1| putative urea short-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Photobacterium profundum 3TCK] gi|90324351|gb|EAS40917.1| putative urea short-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Photobacterium profundum 3TCK] Length = 543 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 99/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ GL+I G +G++++ +GAY+ ++ I L + +S Sbjct: 258 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMLGAYTTYVMQQLMPNHIGLSLILSIPA 317 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G+ + +L L + +L + + + Sbjct: 318 AFFVAGLVGVAIERGVIRFLYGRPL------ETLLATFGISLILQQAVRSVFSPLNRSVA 371 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + Y++ F+ A+++ L++T + R + N+ S Sbjct: 372 TPDWMSGMLEINPMLSLTYNRLYIIFFCFFVFAALVFVLKKTPLGLQVRAVSQNRSMARS 431 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + S G+AG + + S I +V+ GG+ +L Sbjct: 432 MGVRSEWVDAMTFGLGSGVAGVAGVALSQLTNV--GPNMGQSYIIDSFMVVVFGGVGNLW 489 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L ++ L+++ + L I R L Sbjct: 490 GTLVAGLSLGLFNKILEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 536 Query: 343 RTPSNF 348 R + Sbjct: 537 RGRAVE 542 >gi|170749706|ref|YP_001755966.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] gi|170656228|gb|ACB25283.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] Length = 822 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 72/334 (21%), Positives = 133/334 (39%), Gaps = 31/334 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +++ + + L + Y + + + + GL++++G GL+S Sbjct: 1 MHRLRSAPAMRLGIAGLTAAALGLVALTAGYSHFVIALVALTTVAGVGLNVLLGLTGLIS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 YAIGAY+ IL WL +P +A+I+ G ++ +P+++ +G YLA+ T+ Sbjct: 61 FGQAGFYAIGAYASAILTLHGVS-FWLALPAAALIAALVGGLVAVPAMRVKGPYLAMLTI 119 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 I ++ LI+ +T G+ G+ V D LG + + + Sbjct: 120 AFGFIVEHGLIEGGALTGGQNGLVVTDAPTLLGEPLSPAGLAVLAVLAAGASLAGFDLLA 179 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 R+ + A R +RD A +L + K AFA+S+A G+AGA Sbjct: 180 ---------------RSRLGRAMRAVRDADVAAAALGFDPVRVKTLAFAISAALTGLAGA 224 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 I+P F FS++I+ + VI+GG ++ + + + E G+ Y Sbjct: 225 VLPPLMLFIAPSSFPFSQSILFVLSVIVGGAGTVLGPLLGALVTVLLPEALSGLAEY--- 281 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 IA V+ + L+ Sbjct: 282 ------------RLLFFGIATLAVLWLVPSGLVG 303 >gi|311108207|ref|YP_003981060.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310762896|gb|ADP18345.1| inner-membrane translocator 53 [Achromobacter xylosoxidans A8] Length = 361 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 64/310 (20%), Positives = 120/310 (38%), Gaps = 18/310 (5%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 Y + I+I+IY +FA L ++VG GL+SL + IGAY +L + Sbjct: 19 WNGSDYYTGLAIKIMIYAIFALSLQLLVGGAGLVSLGHAAFFGIGAYVAALLSPESEAAG 78 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + +A+++ A ++ I + + I G GIY+ Sbjct: 79 LWWLLPAALLAAAAYALVTGALALRTRGVYFIMVTLAFSQMAYYVFHDTKIGGGSDGIYL 138 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 R + + + Y+ +L L+ + LRR+ A Sbjct: 139 YFRPE---------LSVGGWMPFDLGDARTFYFFVLACLALAWGFLALLRRSPFGAALAG 189 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR N++ + + KL+A+ V + +AG FA ++P++ + ++ +V+ + Sbjct: 190 IRINEQRMRAAGYSTYPYKLAAYVVGATLASLAGFLFALKDGFVTPELLAWEQSGLVLLM 249 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 VILGGM SL T L+ + EL + + + IA+ ++ Sbjct: 250 VILGGMGSLGGAVLGTVALVLLQELFQSQELFG---------DYARHWHLPLGIAIIALV 300 Query: 333 LMRSHSLLRL 342 + + L L Sbjct: 301 ALLPNGLAGL 310 >gi|91777571|ref|YP_552779.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91690231|gb|ABE33429.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 355 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 117/305 (38%), Gaps = 24/305 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 S+ ++L++ + A G ++++G GLLS I + +G+Y ++ +R L + + +A Sbjct: 49 SLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYCAGLVLTRTALPVPAALFAAA 108 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 +I A ++G S++ RG Y + TL ++F + +T G G+ R Sbjct: 109 IIGAAAAALVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTPDLTGGDNGLLDIPRPA--- 165 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + F + Y + + + +++ + + IRDN+ Sbjct: 166 ------LGLFGKTIVPLTSPWQYYGFVAVLFLVVFWLLMRVSHSVFGRTLLAIRDNEARA 219 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + KL AF +S A G+AGA A + + +++ + ++GG + Sbjct: 220 AAVGYDVKRFKLMAFVISGAVTGLAGALHALMTGIAPLSNIDYHTSEMILVMTVIGGTGN 279 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L A + + + + L+ I L V L L Sbjct: 280 LFASVLGAAFYVLFADWLSTLWPRW---------------LLLLGIVLIAVSLFMQRGLW 324 Query: 341 RLRTP 345 L Sbjct: 325 GLGER 329 >gi|330822948|ref|YP_004386251.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|329308320|gb|AEB82735.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 332 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 123/323 (38%), Gaps = 30/323 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ L S + + + I + ++F GLS++ G LS +GA Sbjct: 28 LWLPGLLVLFALPLFTSSPFHMHLAVLICLNIIFVNGLSLL-SRTGQLSFCHAAFMGMGA 86 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ VI +++ L + + ++ A ++G L+ +G Y + T E+F+ L+ Sbjct: 87 YASVIATTQWHAPFLLSVALGVAVAAAVAFLLGAVILRLQGVYFVLVTFCFGELFRLFLL 146 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + T G GI LG + F Y + F S +++ Sbjct: 147 EGGSYTGGANGIANIPPASILGLAFDTKTSF--------------YVLAAACAFASIALL 192 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L RT A + DNQ+ + I ++ AF + SA G AGA A +SP Sbjct: 193 IALFRTPQGTALDAVGDNQELAEASGIGIQRTQMFAFVLGSAMAGFAGALLAHYLGFVSP 252 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F ++ I ++++GG S+ I+ + EL Sbjct: 253 ESFNQHISVAAIVMLVIGGRASVLGPILGALIMTPLPELFRSAIE--------------- 297 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 L I L LV+ L+ Sbjct: 298 TQNILYGITLILVLKFLPGGLVG 320 >gi|323703485|ref|ZP_08115132.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] gi|323531575|gb|EGB21467.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] Length = 357 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 64/331 (19%), Positives = 116/331 (35%), Gaps = 7/331 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L +V LF + + IY++ A +++V+G G+ SL Sbjct: 10 LLTLGLVVLSCALLFFTQNFLDNFQARVLNLAAIYIILAVSMNLVLGFTGMFSLGHAGFM 69 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY IL +I I I L A F Sbjct: 70 CVGAYVSAILTMSPASK--EVIYYMQPIISPLDKIQWPVFPAILVAGLVAAFFGFLIGFP 127 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + ++ + G R+ ++ I I +V G + Sbjct: 128 ALRLRDDYLAIATLGFGEIIRI----VVTNTINITNGSLGLKNIPPIKSMWVYWGFAIAT 183 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I+ L ++ A++ IRDN+ A ++ I KL +F + + F G+AGA Sbjct: 184 ILILKQLINSSWGYAFKAIRDNEIAAEAMGIDIFKHKLMSFTIGAFFAGIAGALMGHLIT 243 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I P MF+F ++ I++LGG+ S++ + ++ ++E+ + Sbjct: 244 SIDPTMFRFLFTFQILLIIVLGGLGSMTGSVISAVVVTVMMEVLRFVEQPMTLLGFNIP- 302 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + L LVIL L+ + Sbjct: 303 GIPGMRMVIFSVLLLLVILFYRQGLMGTKEF 333 >gi|259417813|ref|ZP_05741732.1| inner-membrane translocator [Silicibacter sp. TrichCH4B] gi|259346719|gb|EEW58533.1| inner-membrane translocator [Silicibacter sp. TrichCH4B] Length = 358 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 141/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y L + F + + +++++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYAVLA------VAFGVVPFLVNDYWVNAILLPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ + ++ I+G ++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVLLAGGITGLVCVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDVFGIIITGPNAPAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L A + L R W IRD A + + AK++AFAVS F+ Sbjct: 185 TYMFCLIFLTFCAIMARNLTRGTQGRTWMAIRDMDIAAEIIGVNPLKAKMTAFAVSGFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F + + F +++ +V+ +VI+GG+ S+ A L+ + + Sbjct: 245 GISGALFFSVYLGAVEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVILKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + F ++ + +++ H L +L Sbjct: 305 VGVDWLGWPTDIVAHF---QLVIVGALIITFLILEPHGLAQLWR 345 >gi|269121037|ref|YP_003309214.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386] gi|268614915|gb|ACZ09283.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386] Length = 340 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 75/339 (22%), Positives = 137/339 (40%), Gaps = 36/339 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L A++ +L FL + Y ++ I IYV+FA L+I VG +G LSL A Sbjct: 12 ILSAILIVILFFLLQIIVQINSYYSTILCNIFIYVLFAVSLNITVGLMGQLSLGHAGFIA 71 Query: 76 IGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +GAYS V+ + L + + + G ++G+P L+ +GDYLAI TL Sbjct: 72 VGAYSSVMFTKYVFTSVPNDAVRLILGCIIGGLFAAFFGFLVGIPILRLKGDYLAIITLA 131 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 E+ + + + G AGI ++ + + Sbjct: 132 FGEMIKFTIQNLDFL-GGAAGIRRIPQITTFTS-------------------------IY 165 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + II + + +IR+++ A ++ I KL F +S+ F G+ GA Sbjct: 166 WIVVICIIIITMIMTSRYGRLVLSIREDEIAAENIGIPINKIKLFGFTISAMFAGVGGAL 225 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A S + P F F +I ++ +V+LGG+ S++ + ++L + E ++ ++ Sbjct: 226 LAHSYPTLEPLQFNFVFSIDILVMVVLGGLGSITGAIVSASLLTILNESLRSFANFFPSN 285 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L +++ R LL Sbjct: 286 ---IGMYVQQGRYAFYALVLIFIMIFRPSGLLGTGEFRL 321 >gi|300788859|ref|YP_003769150.1| branched-chain amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299798373|gb|ADJ48748.1| permease component of ABC-type branched-chain amino acid transport system [Amycolatopsis mediterranei U32] Length = 380 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 73/349 (20%), Positives = 136/349 (38%), Gaps = 15/349 (4%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + L A LL+ L G ++I + A GL++VVG G L Sbjct: 15 RPRRGPASLVRKAAWLALLVVLLALPLYLDAAWLKAGQYMMIGAVGAIGLTLVVGQAGQL 74 Query: 67 SLNCVIAYAIGAYSYVI--------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 SL G +Y + +GL L + + +++ G+ + + R Sbjct: 75 SLAHAFFLLAGGTAYTVLSGPIGDDRVVGFGLDPGLSLLGAVVVAALLGLAFAPVAGRLR 134 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 G YL +A+L + + + +T G + G + Sbjct: 135 GIYLGVASLALVFLGLYFGQSAEELTGGTSTGRAPAPFSLFGFPFTDDGPEITLLGVPIR 194 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 M+Y+ L + L+ I R + +WR +RDN+ A + +++ AK AFAVS Sbjct: 195 QAERMWYLFLLLTVLAFVIARGAVRGRVGRSWRAVRDNEAAAAVMGVSVMRAKAGAFAVS 254 Query: 239 SAFIGMAGAFFAASRDRI-----SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 SA+ G+AGA D + + + +I +++VI+GG+ S+ I+ G Sbjct: 255 SAYGGLAGAMTVLWFDILKPDESEFGTYGINVSIAYLAMVIIGGLGSVPGALVGALIVNG 314 Query: 294 VVELCCGMN--FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + ++ + +F+ + + + + A+ LV+L L Sbjct: 315 LPQVLALYSADLGWFSGTGDGALTPVLVSSFVYGAAIILVVLFEPGGLA 363 >gi|319761090|ref|YP_004125027.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|317115651|gb|ADU98139.1| inner-membrane translocator [Alicycliphilus denitrificans BC] Length = 332 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 124/323 (38%), Gaps = 30/323 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL+ L S + + + I + ++F GLS++ G LS +GA Sbjct: 28 LWLPGLLVLFALPLFTSSPFHMHLAVLICLNIIFVNGLSLL-SRTGQLSFCHAAFMGMGA 86 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ VI +++ + L + + ++ A ++G L+ +G Y + T E+F+ L+ Sbjct: 87 YASVIATTQWHVPFLLSVALGVAVAAAVAFLLGAVILRLQGVYFVLVTFCFGELFRLFLL 146 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + T G GI LG + F Y + F S +++ Sbjct: 147 EGGSYTGGANGIANIPPASILGLAFDTKTSF--------------YVLAAACAFASIALL 192 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L RT A + DNQ+ + I ++ AF + SA G AGA A +SP Sbjct: 193 IALFRTPQGTALDAVGDNQELAEASGIGIQRTQMFAFVLGSAMAGFAGALLAHYLGFVSP 252 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F ++ I ++++GG S+ I+ + EL Sbjct: 253 ESFNQHISVAAIVMLVIGGRASVLGPILGALIMTPLPELFRSAIE--------------- 297 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 L I L LV+ L+ Sbjct: 298 TQNILYGITLILVLKFLPGGLVG 320 >gi|167769502|ref|ZP_02441555.1| hypothetical protein ANACOL_00836 [Anaerotruncus colihominis DSM 17241] gi|167668470|gb|EDS12600.1| hypothetical protein ANACOL_00836 [Anaerotruncus colihominis DSM 17241] Length = 347 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 75/341 (21%), Positives = 138/341 (40%), Gaps = 57/341 (16%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 ++L + A Y + + I+I ++ A L++ G LG ++L ++GAY+ Sbjct: 23 FIVLTALMKAGVINTYWAGVIMLIMINIILATSLNLTTGVLGQIALGHAGFMSVGAYAAA 82 Query: 83 IL----------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 I + + + V+ +++ G+I+G+P+L+ +GDYLAI T Sbjct: 83 IFSMKIAEAAKLVEKGAPTAAGFGTFLASLVVAGVVAAIFGLIVGIPALRLKGDYLAIIT 142 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ T G G+ +L T Sbjct: 143 LGFGEIIRVIIEN-VEFTGGAQGLSGIPKLSNFNT------------------------- 176 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + L+ +++ R+ A IR++ A + + K+ AF +S+ F G+AG Sbjct: 177 VYWVTALTIAVLFAFGRSRHGRAIIAIREDDIASEASGIPNTYYKVLAFTISAFFAGVAG 236 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A +A + F F +I ++ IV+LGG+ SL+ A L + E G + Y Sbjct: 237 AVYAQQMQVLGAKTFNFMRSIDILVIVVLGGLGSLTGSIIAAVGLTVLPEALRGFSEY-- 294 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL +V++ + LL R S Sbjct: 295 -------------RMLIYSVALIVVMIFKPSGLLGTREFSM 322 >gi|116749713|ref|YP_846400.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116698777|gb|ABK17965.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 318 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 136/332 (40%), Gaps = 34/332 (10%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ P ++ Y + I L Y+M A +++ G G +S IGAY Sbjct: 9 VLVPAVVLFGFLPFGLGSYHLHVVIVSLFYLMMASSWNLLAGYTGQVSFAHAAFAGIGAY 68 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + IL R+GL+ W+ + V M++ G+ +G+ L+ G YL++ TL SEI + I+ Sbjct: 69 TSGILAVRFGLNPWIGVVVGTMLAALLGLAVGVLCLRMGGIYLSLTTLGFSEILRIIITN 128 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 +T G G+ V ++ +YV+LG L+ II Sbjct: 129 EYEVTRGTMGLQVPGLFAEY-------------------SKVGYFYVMLGAAVLTLIIIY 169 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + I +R ++++++A SL ++ ++ AF VSSA GMAG + I+P+ Sbjct: 170 RLIHSNIGLNFRAVQNDERAAASLGVDVVRVRVLAFTVSSALAGMAGGLYGHYLLLITPE 229 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + +V+S+ ++GGM S L + E Y Sbjct: 230 IPSLDQQFLVLSMTVIGGMGSFPGPIIGAFSLEILSEYIRAYGEY--------------- 274 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 H + + + + L+ L R Sbjct: 275 HVLVFGLIALVAARFAPNGLMGLAKDRLVRRR 306 >gi|91781308|ref|YP_556515.1| branched chain amino acid ABC transporter ATPase/inner membrane protein [Burkholderia xenovorans LB400] gi|91693968|gb|ABE37165.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 620 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 113/332 (34%), Gaps = 39/332 (11%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + V L G Y+ ++ IQ + + A + ++ G G L+ + Sbjct: 32 GWIMVAGFAAALLAAGPFVFGSYLLNILIQAFFFSIVAVTVDVLWGYTGYLTFGQSAFFG 91 Query: 76 IGAYSYVILGSRYGL---SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI--ATLIMS 130 +GAY+ ++ + G + + + + +++GA G ++G S +L++ Sbjct: 92 LGAYAAGLVFTHGGFSAGYVVVALGAAIVVTGAVGGLLGWLSFYRGASPFFAIVMSLVLP 151 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + +L+ T +G+ +F + Y++ Sbjct: 152 IVLSQLLLSGGQWTGSSSGLTGYP--------------------TFDLSLQAWYWIAGVT 191 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + A++ R+ IRDN+ L K+ A ++ G+AG + Sbjct: 192 LLVVATLAWLFVRSDGGRVLAAIRDNESRGSYLGINTSLVKIILLAATAVIAGLAGFGYG 251 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + ++P++ F +I V LGG +L ++ Sbjct: 252 SFSGVVAPELTGFVLGTQLIIWVALGGRGTLWGPVIGALLINVGTAYLSS---------- 301 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 S ++ A +VI++ L+ L Sbjct: 302 ----SMPFAWQLILGAAFVIVIVLVPQGLVPL 329 >gi|323701782|ref|ZP_08113453.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] gi|323533318|gb|EGB23186.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] Length = 326 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 78/349 (22%), Positives = 147/349 (42%), Gaps = 42/349 (12%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MS+F ++ K IL +L +++ + F+ + + I I I ++ A L+++ Sbjct: 1 MSMFQRQIGKQFAILLVLVLIWLAVEFMIR-FGILNPFYELNLILIGINIILAVSLNLIN 59 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G S+ A+GAY ++ + L + L + A+++G G+++G+P+L+ RGD Sbjct: 60 GFNGQFSIGHAGFMAVGAYGAAMITLKTQLPLPLALLFGALLAGVFGVLVGIPTLRLRGD 119 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLAIATL EI + I++ I G G+ + Sbjct: 120 YLAIATLGFGEIIRGIIVNIDYI-GGAYGLSGIP-------------------------K 153 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 I + + + L+ II + A +IR+N+ A ++ K+ AF + S Sbjct: 154 IATWSWVFWLTVLTVIIITNFVNSTHGRATISIRENEIAAEAMGINTTKYKVMAFTIGSF 213 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G+AG A I P+ F F ++ ++ +V+LGG S++ A L + Sbjct: 214 FAGLAGGLHAHYFYTIQPNTFNFLKSFDILVMVVLGGQGSITGSIIAAIFLTIISASLQS 273 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + + + L +++L R L+ + S + Sbjct: 274 L---------------AALRLVIYALLLIIIMLFRPQGLMGTKEFSFKM 307 >gi|309776674|ref|ZP_07671648.1| branched-chain amino acid ABC transporter, permease protein [Erysipelotrichaceae bacterium 3_1_53] gi|308915422|gb|EFP61188.1| branched-chain amino acid ABC transporter, permease protein [Erysipelotrichaceae bacterium 3_1_53] Length = 319 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 135/341 (39%), Gaps = 43/341 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +K + L ++ L + Y S I I ++ A L++++G G S Sbjct: 5 FSKLNLCWILFTTALLTIITLLMQGGVINFYYQSTLYTIGINMILAISLNLIIGVTGQFS 64 Query: 68 LNCVIAYAIGAYSYVILGSRYGL--SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L IGAY+ I+ + + + +IS +++ +P+L+ +GDYLAIA Sbjct: 65 LGHAGFMCIGAYAAAIITKATPNLGGFAIAVVIGGVISALVALVVAIPTLRLKGDYLAIA 124 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL SEI + I++ F I ++ + Sbjct: 125 TLGFSEIVRIIVLNMTITNGAA--------------------------GLFGIPKLTTWP 158 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +LL +S I+L R+A A +IR+++ A ++ K AF + + +A Sbjct: 159 LLLFCLIVSLLIVLNFSRSAPGRACISIREDEIASEAMGINTTKYKTIAFVIGAVLASLA 218 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA +A + + PD+F F++++ ++ +V+ GGM S + A ++ + Sbjct: 219 GALYACNFYVVKPDLFTFNKSVDILILVVFGGMGSFTGSIVAAVVIGFINMYLQNFAD-- 276 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + AL L+++ R L + + Sbjct: 277 -------------VRMIIYGAALVLIMVFRPEGLFGTKEFT 304 >gi|291457343|ref|ZP_06596733.1| branched-chain amino acid ABC transporter, permease protein [Bifidobacterium breve DSM 20213] gi|291381178|gb|EFE88696.1| branched-chain amino acid ABC transporter, permease protein [Bifidobacterium breve DSM 20213] Length = 362 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + ++ + + YI + + I ++ L++ +G LG L+L C A Sbjct: 16 FLGILATFGIVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75 Query: 76 IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 IGAY + + + +++ G+++G+P+L+ GDYLAI T Sbjct: 76 IGAYVAALASKYMVAAGIGVDPTARFLITTLIGGIVACVFGILIGIPALRLHGDYLAIIT 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ K L + + I YV Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIERTANLYV 177 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++ ++ R+ A + IRD++ A + + K+ FA+S+ F G+AG Sbjct: 178 VFWIMVVTVVVLFMFGRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 237 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA ++P M + +I + +V+ GGM SL+ + L + EL Y Sbjct: 238 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 295 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L LV++ R + S Sbjct: 296 -------------RMLAYSVVLVLVMIFRPQGIFGSWEFSL 323 >gi|110637661|ref|YP_677868.1| branched-chain amino acid ABC transporter permease [Cytophaga hutchinsonii ATCC 33406] gi|110280342|gb|ABG58528.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Cytophaga hutchinsonii ATCC 33406] Length = 543 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 104/312 (33%), Gaps = 29/312 (9%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIW 93 + + S I +M A GLSI+ G G++++ IGAY+ I+ S W Sbjct: 254 QNLFSGLSLGSILIMVALGLSIIYGLAGIINMAHGEFLMIGAYTTFIIQSLLPKGDLFFW 313 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +PVS +++GA G I+ +++ + L+ + +LI++ G Sbjct: 314 ISLPVSFLVAGAFGFIIERLIIRYLYSRPLES-LLATWGVSLVLIQFARTLFGDLTAVRT 372 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + G + S ++ +++ F+ A L +T + R + Sbjct: 373 PAVLSGGWEITSH----------LVLPYNRLFIIGLCIFMIAITYYTLYKTRLGLRVRAV 422 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 N+ L F + S G AG + + + + +V Sbjct: 423 TQNRNMSSCLGIETGKVDAITFFLGSGLAGTAGCAMTLIGNVV--PDMGQTYIVDSFLVV 480 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 + GG+ +++ + + + ++ + +L Sbjct: 481 VTGGVGNIAGTIVSGFGIGFIFKILESFFEAVYGKVLILAIIILFLQ------------- 527 Query: 334 MRSHSLLRLRTP 345 + L + Sbjct: 528 FKPKGLFPDKGR 539 >gi|288961293|ref|YP_003451632.1| branched-chain amino acid transport system ATP-binding protein [Azospirillum sp. B510] gi|288913601|dbj|BAI75088.1| branched-chain amino acid transport system ATP-binding protein [Azospirillum sp. B510] Length = 632 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 115/316 (36%), Gaps = 33/316 (10%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y ++ I ++ + GL ++ G G+ S + AY+ L + + + Sbjct: 44 TYQVTLANNIGVFALATLGLVLLTGVAGMTSFGQAAFVGVSAYATAYLATAAAGDLPAPL 103 Query: 97 PVS-----------AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 +++ A +++G +L+ G YL + T+ + + + Sbjct: 104 AWMAGSPLAGLAAGLLLTLAIALVLGAVTLRLSGHYLPLGTIAWGLSLFYLFGTLEFL-G 162 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G +G+ L G + ++Y++ + L+ + L L + Sbjct: 163 GHSGVTGIPALSLFGVSFDRAE--------------SLFYLIWAILLLAVAATLNLLDSR 208 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + A R +R Q+ S+ AK++AF VS+ + G+AG +A ++ +SP F Sbjct: 209 VGRAIRALRGGQRMSESMGVDSFRAKMTAFLVSALYAGLAGWLYAYTQRFVSPAPFSLQA 268 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 I + + ++GG+ + A + + + + F + Sbjct: 269 GIDFLFMALIGGVGQVWGAVIGAAGVTFARQWLQDLLPHLLGRTGNF-------EAIVFG 321 Query: 326 IALFLVILMRSHSLLR 341 + + L++ + Sbjct: 322 LLIILLMQRLPGGIAG 337 >gi|153809784|ref|ZP_01962452.1| hypothetical protein RUMOBE_00165 [Ruminococcus obeum ATCC 29174] gi|149833962|gb|EDM89042.1| hypothetical protein RUMOBE_00165 [Ruminococcus obeum ATCC 29174] Length = 355 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 76/338 (22%), Positives = 140/338 (41%), Gaps = 25/338 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + K + I L +V +++ + + + + + +Y + + L++VVG G L Sbjct: 6 KTTKNNLINYGLVLVLFVIVEILSATGNLSNLLKGLMVPLCVYTIASISLNLVVGFSGEL 65 Query: 67 SLNCVIAYAIGAYSYVILGS-----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 SL +GAYS + L I V A ++ G+I+G+P L+ RGDY Sbjct: 66 SLGHAGFMCVGAYSSALFSHIASDIPQVPRFILAILVGAAVAAVFGVIIGIPVLRLRGDY 125 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL-----YFLGTTVRSLIRFFRFPSSF 176 LAI TL EI +N++ + ++ + + + Sbjct: 126 LAIVTLAFGEIIKNLINILYVGIDDSGLHVATSSAALKLGTGGKQILKGALGISGTGALY 185 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 + + + + + + L+ I+ L + A RDN+ A S+ + KL AF Sbjct: 186 KDVKHYFFPIGIVLVLLTLFIVQNLVNSRSGRAITATRDNRIAAESVGIDVTKFKLLAFT 245 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 VS+A G+AG +A + + F ++ +I+++ V+LGG+ +L AT IL + E Sbjct: 246 VSAALAGVAGVLYAHNLSMLKVSGFDYNMSILILVYVVLGGIGNLRGSIIATVILYALPE 305 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 L G Y + I L +++L Sbjct: 306 LLRGFANY---------------RMLIYAIVLIVMMLF 328 >gi|324991356|gb|EGC23289.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK353] Length = 317 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LL+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KINIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + A+I+G + +GLP+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALAVGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K++AF + + +AG+ Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305 >gi|256043289|ref|ZP_05446224.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella melitensis bv. 1 str. Rev.1] gi|265989713|ref|ZP_06102270.1| branched-chain amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] gi|263000382|gb|EEZ13072.1| branched-chain amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] gi|326410550|gb|ADZ67614.1| branched-chain amino acid ABC transporter, ATP-binding protein [Brucella melitensis M28] gi|326553841|gb|ADZ88480.1| branched-chain amino acid ABC transporter, ATP-binding protein [Brucella melitensis M5-90] Length = 907 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 320 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 379 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ G+S W + + A I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 380 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 438 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 439 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 484 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 485 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 544 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + ++GG+ +++ +L+ + E L F Sbjct: 545 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 600 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 601 ------VYGLVLILVVLFMPNGIMG 619 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 18 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L A + + +I + G + Sbjct: 78 LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + A R + ++ A + + Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + + + ++ L+++++ L Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285 >gi|323486966|ref|ZP_08092281.1| hypothetical protein HMPREF9474_04032 [Clostridium symbiosum WAL-14163] gi|323399738|gb|EGA92121.1| hypothetical protein HMPREF9474_04032 [Clostridium symbiosum WAL-14163] Length = 354 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 78/343 (22%), Positives = 148/343 (43%), Gaps = 24/343 (6%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + ++ + I L + LL+ + + + + + + YV+ A L++ V Sbjct: 1 MKSYKNKILIQNTITYALVIAAFLLIQILMAGGHINSLLKGILVPLCTYVILAVSLNLTV 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLP 113 G LG LSL +GA+S L + + V A+++ A G+++G+P Sbjct: 61 GILGELSLGHAGFMCVGAFSGAFFTHVMAASIPNPQLRFIIALFVGAVVAAAFGILIGIP 120 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L+ +GDYLAI TL EI +N++ T+ + L + Sbjct: 121 VLRLKGDYLAIVTLAFGEIIKNVINVLYVGTDASGIHISTKDVASLNLAEGGKVIIKGAQ 180 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 ++ + + + ++ I+L + + A IRDN+ A S+ I KL Sbjct: 181 GITGTPKMATFTIGFILVLITLFIVLNMINSRTGRAIMAIRDNRIAAESIGINITKYKLL 240 Query: 234 AFAVSSAFIGMAGAFFAASRDR--ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 AF+VS+A G+AG +A + +P F ++ +I+++ V+LGG+ ++ A IL Sbjct: 241 AFSVSAALAGVAGVLYAHNLATLAATPKSFGYNMSIMILVFVVLGGIGNIRGSVIAAVIL 300 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + E+ G+N Y + I L +++L+ Sbjct: 301 TLLPEMLRGLNNY---------------RMLIYAIVLIVMMLL 328 >gi|94309162|ref|YP_582372.1| inner-membrane translocator [Cupriavidus metallidurans CH34] gi|93353014|gb|ABF07103.1| ABC-type transporter, livM-like permease component [Cupriavidus metallidurans CH34] Length = 358 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 78/345 (22%), Positives = 145/345 (42%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + + + F+ + ++ ++ ++ LI+ + A GL+I+ G Sbjct: 18 QIFPIRQDR------IFFALLMAVAFVAIPFVGTEYWLSAILTPFLIFSLAALGLNILTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GAY+ R L ++ + G+ GLPSL+ +G Sbjct: 72 YAGQLSLGTAAFMAVGAYAAYNFQLRIEGIPVLLTFILAGASAAVVGVAFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL L K+ ++N + + + + Sbjct: 132 YLAVATLAAQFFVVWALTKFPWLSNNSSSGVI-------------TAQRLDLFGVAIDTP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +LG+ + A I L R+A AW +RD A + ++ KL AFAVSS Sbjct: 179 VKKYLFVLGIVTVLALIAKNLVRSATGRAWMAVRDMDVAAEVIGIPLMRTKLLAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 + G+AGA +A + PD F + ++ ++I+GG+ S+ A ++ + Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGAAFILLLPIFLD 298 Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342 + +SL + + H + + +++ H L RL Sbjct: 299 NVLPALASSLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARL 343 >gi|299533434|ref|ZP_07046816.1| inner-membrane translocator [Comamonas testosteroni S44] gi|298718640|gb|EFI59615.1| inner-membrane translocator [Comamonas testosteroni S44] Length = 364 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 133/335 (39%), Gaps = 24/335 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + + + + + L Y+ + ++I+I +FA L I+VG GL+ Sbjct: 27 RPIRAKSVWVAVVLPLAVAALLAAAQPFWSAYLSDLVVKIMILSIFALSLHILVGGAGLV 86 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 SL + +GAY+ V + G + +++ + +SG +++G SL+ +G Y + T Sbjct: 87 SLGHAAYFGLGAYAAVKAAGQDGSNFLVMLGAAVGVSGLYALLVGALSLRTKGVYFIMVT 146 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++ G GIY+ R + S Y+V Sbjct: 147 LAF-AQLAFFVVHDVGYFGGSDGIYLMQRPAIGALDMESSST--------------QYFV 191 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L L + I LR + +A IR N++ + KL+ F ++ A G+AG Sbjct: 192 VLAALVLVYAFIAMLRHSRFGHALAGIRVNEQRMRAAGFATYGYKLAGFVIAGALAGLAG 251 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 AA ++P++ + + V+ ++ILGG+ SL T + + EL Sbjct: 252 FLLAARDAVVNPELLAWHHSGEVLLMLILGGVGSLRGAVLGTITFVLLKELLST------ 305 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + I++ ++ + L+ Sbjct: 306 ---HAIVGNAADHWQLTLGISIIALVALLPKGLVG 337 >gi|260564497|ref|ZP_05834982.1| urea ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|260152140|gb|EEW87233.1| urea ABC transporter [Brucella melitensis bv. 1 str. 16M] Length = 907 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 320 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 379 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ G+S W + + A I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 380 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 438 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 439 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 484 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 485 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 544 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + ++GG+ +++ +L+ + E L F Sbjct: 545 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 600 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 601 ------VYGLVLILVVLFMPNGIMG 619 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 92/294 (31%), Gaps = 27/294 (9%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 18 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L A + + +I + G + Sbjct: 78 LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + +A R + ++ A + + Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGHAIRAVAQHRSAAELMGVNV 186 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + + + ++ L+++++ L Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285 >gi|325690655|gb|EGD32656.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK115] gi|332362300|gb|EGJ40100.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1056] Length = 317 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LL+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + V A+I+G + +GLP+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLVGAVIAGIVALAVGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K++AF + + +AG+ Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305 >gi|239817899|ref|YP_002946809.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239804476|gb|ACS21543.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 358 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 77/320 (24%), Positives = 136/320 (42%), Gaps = 20/320 (6%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L FL + +Y + +LIY + GL ++ G G S+ GAY+ Sbjct: 27 LLAAFLVVAPWTIDEYWLAQLTFVLIYGIVGLGLMLLAGFTGQFSIGHAAFLGTGAYTQG 86 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L G+ + + +A +S A G+++ LP+L+ +G YL IATL I + + +W+ Sbjct: 87 VLT-NLGVPFPIALLAAAALSAAVGVVVALPALRVKGIYLGIATLSFGFIVEEVFARWES 145 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G AG++V F + Y++ L + L IL L Sbjct: 146 VTGGNAGLHVKSPQLFGW---------------SLGSGNGFYFLCLVVAVLGTLGILNLL 190 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ A+ IRD++ + S+ + K +FA+S+A G+ GA +A ISPD F Sbjct: 191 RSPTGRAFVAIRDSEISAQSMGIHLARYKTMSFAISAALAGLGGALYAHKLSFISPDQFN 250 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 ++I ++ +V++GG+ S+ LI + +L + L Sbjct: 251 ILQSIDLLLMVVIGGLGSVHGAFLGAIFLIAMPQLIS----MGKDWLPAVIGQAPGLQGL 306 Query: 323 LMVIALFLVILMRSHSLLRL 342 + + L +L L Sbjct: 307 VYGVVLIAFVLFEPLGLYGR 326 >gi|225375070|ref|ZP_03752291.1| hypothetical protein ROSEINA2194_00693 [Roseburia inulinivorans DSM 16841] gi|225213142|gb|EEG95496.1| hypothetical protein ROSEINA2194_00693 [Roseburia inulinivorans DSM 16841] Length = 361 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 133/337 (39%), Gaps = 24/337 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + K I + +V +++ + + + + + Y + A GL++ VG LG L Sbjct: 14 KSTKDHIITFAMVIVVYIIVQTMITTGNMSSLMQGLLVPMCTYSIVAIGLNLCVGYLGEL 73 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLS-------IWLLIPVSAMISGACGMIMGLPSLKFRG 119 S+ +GA+S S + I V + + G ++G+P L+ RG Sbjct: 74 SIGHAGFMCVGAFSSAFCTKLLQDSIQNEVILFLIAIAVGTVAAAFFGFLIGIPVLRLRG 133 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +N++ + + + + + I Sbjct: 134 DYLAIVTLAFGEIIKNVINVLYIAKDENGFHFAISDGNKIELSEDGIWLINGAKGIAKIP 193 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + + + M + I+ + A IRDN+ A S+ I KL AF +S+ Sbjct: 194 HLSSFTAGVIMILVILFIVYNFVNSRTGRAVMAIRDNRIAAESVGINITKFKLMAFTISA 253 Query: 240 AFIGMAGAFFAASRDRI--SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 A G G +A + + +P F ++ +I+++ V+LGGM S A IL + E+ Sbjct: 254 AIAGAGGVLYAHNLSTVTATPTNFGYNMSIMILVFVVLGGMGSFRGSIIAAVILTLLPEV 313 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 G+ Y + I L +++L Sbjct: 314 LRGLKDY---------------RMLIYSIVLIVMMLF 335 >gi|324993709|gb|EGC25628.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK405] gi|324994978|gb|EGC26891.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK678] gi|327462979|gb|EGF09300.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1] gi|327474582|gb|EGF19987.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK408] gi|327490140|gb|EGF21928.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1058] Length = 317 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LL+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + A+I+G + +GLP+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALAVGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K++AF + + +AG+ Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305 >gi|305431963|ref|ZP_07401130.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] gi|304445047|gb|EFM37693.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] Length = 346 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 77/359 (21%), Positives = 132/359 (36%), Gaps = 47/359 (13%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L + + F+ L Y + QI IY+ A +++ G G SL Sbjct: 6 ISALVYIVLAIAFIMLAPQFFDGYGIGILNQIAIYITLAVSYNLINGVTGQFSLEPNGFI 65 Query: 75 AIGAYSYV--------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 A+GAY+ I+ + + S L + V+ + +I+ Sbjct: 66 AVGAYAAALVLLSSEQKLDLFSLEDPNPIILALHTNSFILALLVAGFSACVLSLILAFAV 125 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + RGDYLAI TL I Q + I + TNG G+ L Sbjct: 126 FRVRGDYLAIVTLGFGIIIQKLAINFPSWTNGSMGLNGIPLLSN---------------- 169 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 Y G+ +S +IL L + A + IRD++ A ++ + K A Sbjct: 170 ---------LYWTGGVAIISVILILNLVYSKFGRAMQAIRDDEDAASAMGVNTFWTKTLA 220 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F S+ G+ G +SP+ F F +++ I++LGG+ S + ++IG Sbjct: 221 FGTSAFLEGVGGGLLVCLLASVSPEQFGFEFTFMLLIIIVLGGLGSTTGAILGAILIIGG 280 Query: 295 VELCCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 E ++ L S + + L LV+L + R ++F +R Sbjct: 281 REWLRFLDEMQIKIDFLGIDMGSMPGLRMVVFSLILILVMLFARRGIFGDRELNSFFKR 339 >gi|316935097|ref|YP_004110079.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315602811|gb|ADU45346.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 328 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 126/311 (40%), Gaps = 24/311 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 Y+ ++ + L+Y + +I+ G G +SL + + +GAY+ +L ++ G+ Sbjct: 29 FVKDVYVQNIMVLTLMYAALSQAWNILGGYCGQISLGHALYFGLGAYTTALLFTKLGVLP 88 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 W + +IS + +G P+ + RG Y IAT++++EI + W Sbjct: 89 WFGMLGGGIISSVIALALGYPTFRLRGHYFVIATIVIAEIGFLLFHNWDWAGAALGIDIP 148 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 + ++ YY L C L+ I WL+ + WR Sbjct: 149 VRGDSWAKFQFTR-------------SKLPYYYFALVFCCLAWLITWWLQDSKWGYWWRA 195 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVIS 271 ++DN +A SL + +K+ A AVS+ + G+F+A I P+ F ++++ Sbjct: 196 VKDNPEAAESLGVVVFNSKMGAAAVSAFLTAVGGSFYAMFVSYIDPESVMTFQFSLLMAL 255 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +LGG+ +L AILI + EL + L + L+ Sbjct: 256 PAVLGGIGTLWGPVLGAAILIPLTELTRSFVGGSGRGV----------DLILYGSVIVLI 305 Query: 332 ILMRSHSLLRL 342 L R LL L Sbjct: 306 SLARPEGLLGL 316 >gi|291279455|ref|YP_003496290.1| branched-chain amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754157|dbj|BAI80534.1| branched-chain amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 279 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 71/312 (22%), Positives = 128/312 (41%), Gaps = 41/312 (13%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + Y + I ++ GL+++ G G LSL ++GAY +L + Sbjct: 3 FLSFFQNDYFLQIATMTCINIVIVLGLNLITGVTGQLSLGHAAFMSLGAYCSALLALKLN 62 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + W+ + + +G G ++G+P L+ RGDYLAIATL EI + +++ Sbjct: 63 MPFWVCVSAGTLFAGIMGALLGIPILRLRGDYLAIATLGFGEIVRVVILN---------- 112 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 R + I + +++ L L + + A Sbjct: 113 ----------------TPIAGRALGLYAIPQYTTFFIALLAVILGIIFMYRFENSRHGLA 156 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R+IR+++ A + I K+ AFAV SAF G+ G+ +A I+P+ F F ++I Sbjct: 157 LRSIREDEIAAEMMGVDIAKYKILAFAVGSAFAGLGGSLYAHFLTYINPNDFGFMKSIEQ 216 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +++LGGM S++ A +L V EL + Y + L Sbjct: 217 LCMLVLGGMGSITGAAAGAVVLSTVPELLRFASEY---------------RMVTYGVVLI 261 Query: 330 LVILMRSHSLLR 341 ++++ R L Sbjct: 262 VMMIFRPQGLFG 273 >gi|237739397|ref|ZP_04569878.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. 2_1_31] gi|229423005|gb|EEO38052.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. 2_1_31] Length = 326 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 75/335 (22%), Positives = 139/335 (41%), Gaps = 45/335 (13%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + +V +LF + + +Y + I ILI V+ A L+I VG LG ++L +I Sbjct: 14 AILLVLYFILFSLINSGFISRYQIGIIILILINVILAASLNITVGCLGQITLGHAGFMSI 73 Query: 77 GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 GAY+ +L + + V +++G G I+G+P+L+ GDYLAI TL EI Sbjct: 74 GAYTAALLTKSGFLSGYPGYIVALIVGGIVAGIIGFIIGIPALRLTGDYLAIITLAFGEI 133 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +LI++ T G G+ R+ ++ + Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LIYFITI 167 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S + + + A IR+++ A + + K AF +S+ F G+AG +A + Sbjct: 168 FSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + F ++ +I ++ +V+LGGM S + + +L + E+ Y Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R LL + Sbjct: 280 -------RMIVYPLILIIMMLFRPEGLLGRKEFQI 307 >gi|167770567|ref|ZP_02442620.1| hypothetical protein ANACOL_01913 [Anaerotruncus colihominis DSM 17241] gi|167667162|gb|EDS11292.1| hypothetical protein ANACOL_01913 [Anaerotruncus colihominis DSM 17241] Length = 336 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 66/325 (20%), Positives = 126/325 (38%), Gaps = 30/325 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ L S YI +G I I ++ A G+ V G G +++ Y IG Sbjct: 16 ILTGMFAIIICLLPLIFSSDYIIHIGCMIGINILLALGMHFVTGLAGQINMGQYGFYCIG 75 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L ++ L + V+ IS A GM++G+P+LK G YL++ T+ +E + ++ Sbjct: 76 AYAGALLTTKGELGFVPSLIVTIAISAAFGMLVGIPALKVEGPYLSLCTIGFAESVR-LV 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I +N GI +L G T+++ Y+ + + I Sbjct: 135 INSAGWSNKSNGIMRIPKLEIFGWTMQTKTM--------------SYFFIFVFVLIGLII 180 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + I+D+ A + + K+ AF + + F G+AG +A I Sbjct: 181 VTNFVNSNYGRRFSAIKDDPLAASVMGVNVRKVKIMAFVLCAIFAGVAGCLYANYAGYIH 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + + +++LGG+ S ++ V E Y Sbjct: 241 PTTFVQALQTNFLLMIVLGGLGSTWGSVLGATLITVVYEYTRVYAEY------------- 287 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + + L +L ++ Sbjct: 288 --QKIAFGVVMILTVLFLQRGIVGT 310 >gi|221069669|ref|ZP_03545774.1| inner-membrane translocator [Comamonas testosteroni KF-1] gi|220714692|gb|EED70060.1| inner-membrane translocator [Comamonas testosteroni KF-1] Length = 364 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 133/335 (39%), Gaps = 24/335 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + + + + + L Y+ + ++I+I +FA L I+VG GL+ Sbjct: 27 RPIRAHSVWVGVVLPLAAAVLLAAAQPFWSAYLSDLVVKIMILSIFALSLHILVGGAGLV 86 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 SL + +GAY+ V + G + +++ + +SG +++G SL+ +G Y + T Sbjct: 87 SLGHAAYFGLGAYAAVKAAGQDGSNFLVMLGAAVGVSGLYALVVGALSLRTKGVYFIMVT 146 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++ G GIY+ R + S Y+V Sbjct: 147 LAF-AQLAFFVVHDVGYFGGSDGIYLMQRPAIGALDMESSS--------------TQYFV 191 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L L + I LR + +A IR N++ + KL+ F ++ A G+AG Sbjct: 192 VLAALVLVYAFIAMLRHSRFGHALAGIRVNEQRMRAAGFATYGYKLAGFVIAGALAGLAG 251 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 AA ++P++ + + V+ ++ILGG+ SL T + + EL Sbjct: 252 FLLAARDAVVNPELLAWHHSGEVLLMLILGGVGSLRGAVLGTITFVLLKELLST------ 305 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + +A+ ++ + L+ Sbjct: 306 ---HAIVGNAADHWQLTLGLAIIALVALLPKGLVG 337 >gi|16265264|ref|NP_438056.1| short-chain amide/branched-chain amino acid uptake ABC transporter permease [Sinorhizobium meliloti 1021] gi|15141404|emb|CAC49916.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 537 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 94/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S L S I+ ++ Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLAIALPLAFLVT 317 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + S Sbjct: 318 GAVGLALER--GVIRFLYGRPLETLLATWGISLILQQTVRTIFGPTNREVGNPSW-MSGA 374 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + A+++ L++T + R + N++ S+ + Sbjct: 375 FELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSMGIRTPWVD 434 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S G+AG A S+ I +V+ GG+ +L L Sbjct: 435 ALTFALGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFSL 492 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L+++ + L I R L L+ + Sbjct: 493 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 536 >gi|91975996|ref|YP_568655.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91682452|gb|ABE38754.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 309 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 116/316 (36%), Gaps = 30/316 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + ++ I + GL++++G G +SL + IGAY+ IL + + Sbjct: 24 NAFYFDIVNRMAINAVIVLGLNLLIGFAGQISLGHAGFFGIGAYASAILTTHFSWPPLAA 83 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + V A+ + + + P + RG YLA+ATL + + +L T G G+ V Sbjct: 84 LAVGAVGAALLALAIAPPIFRLRGHYLAMATLGLGIVISIVLKNEAAYTGGPDGMSVPPL 143 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 F Y++ + S L + A R + Sbjct: 144 TLFGFEIYGERQW---------------YWLFAAILLFSVWACQNLIDSPFGRALRALHG 188 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + K++ F +S+ F + G+ A ++P+ +F +I ++++V++ Sbjct: 189 SEVASQVVGVDVARYKVAIFVLSAFFASIMGSLSAHYVGFVTPNAAEFLHSIELMTMVVV 248 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ +L + + T + L + ++ Sbjct: 249 GGMASVYGSVIGAVLLTALPQALATFEG---------------WETVAFGVILMVSMIFL 293 Query: 336 SHSLLRLRTPSNFLER 351 L+ +R Sbjct: 294 PKGLVPTIAAKLGRKR 309 >gi|309802606|ref|ZP_07696710.1| branched-chain amino acid ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|308220670|gb|EFO76978.1| branched-chain amino acid ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 363 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 141/351 (40%), Gaps = 42/351 (11%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L + + + + V LL + Y+ + + I V+ L++ +G LG Sbjct: 6 LSIKQSYLVCAIGVAVLFGLLMAVCETGVASLYVKGIIMTCCIAVIMTTSLNLTIGVLGQ 65 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLK 116 L+L C AIGAYS +L + L+ +++ G+++G+P+L+ Sbjct: 66 LTLGCCGFEAIGAYSAALLSKLLVANGVQMDATLRFLLVTFAGGVVACIFGILVGIPALR 125 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 GDYLAI TL EI + I+ K + L + + Sbjct: 126 LHGDYLAIITLGFGEIIRVIIQNLKVAGG------------------KGLSEGQQGQALI 167 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 I + YV+ + ++ ++ R+ A + IRD++ A + I + K+ FA Sbjct: 168 GIDRLANLYVVFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAAGASGINITYLKVMVFA 227 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S+ F G+AG FA ++P M + ++I + +V+ GGM SL+ A L + E Sbjct: 228 ISAFFAGIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVAAVGLTILPE 287 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L + Y + + L L+++ R + S Sbjct: 288 LLRAFSEY---------------RMLVYSVVLVLIMVFRPQGIFGNWEFSL 323 >gi|56477446|ref|YP_159035.1| putative branched-chain amino acid transport system protein [Aromatoleum aromaticum EbN1] gi|56313489|emb|CAI08134.1| putative branched-chain amino acid transport system protein [Aromatoleum aromaticum EbN1] Length = 600 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 108/333 (32%), Gaps = 31/333 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ L L + + ++ I +Y + A GL ++ G GL S +GA Sbjct: 9 LILGVFLAVLAVAPLVLSPFYVTLLNYIGLYALVALGLVLLTGVGGLTSFGQAAFVGLGA 68 Query: 79 YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 Y+ + + G S WL + V + + +++G +L+ G YL + T+ Sbjct: 69 YTTAVLTTATELPGWLAWAGGSPWLALVVGLVFTAVVALVLGSLTLRLSGHYLPLGTIAW 128 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + G G+ + G + ++Y++ Sbjct: 129 GISLYFLFGTLDTL-GGHTGLTGVPPITVFGFELDRGEE--------------LFYLIWL 173 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L + A R ++ ++ +++ F +++ +G + Sbjct: 174 FLLSAVFTTQNLLDSREGRAIRALKGGMVMAEAMGVNTARSRMIIFVIAALHACASGWLY 233 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + ++P F I + + ++GG + ++ + + F Sbjct: 234 AHLQRFVNPTPFGLHIGIEYLFMAVVGGAGQVWGALVGAGVITIAKQWLQDVLPRIFGQS 293 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + +V+ L L Sbjct: 294 GNF-------EVIFFGLMMVIVLQRARDGLWPL 319 >gi|157370790|ref|YP_001478779.1| inner-membrane translocator [Serratia proteamaculans 568] gi|157322554|gb|ABV41651.1| inner-membrane translocator [Serratia proteamaculans 568] Length = 370 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 97/352 (27%), Positives = 160/352 (45%), Gaps = 17/352 (4%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + L ++ + LLL ++ + Y + L+Y+M A GL+IVVG GLL + Sbjct: 12 SPHRARLGVVLFMLGLLLAPWVAGSVGGNYWVRVIDFALLYLMLALGLNIVVGLTGLLDM 71 Query: 69 NCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGL 112 + YA+GAY +L S + LSI LLIP++A+++ CG+++G Sbjct: 72 GFIAFYAVGAYLTALLSSPHLTQQFPLLLQWFPEGLHLSILLLIPLAAVLAALCGILLGA 131 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 P+L+ RGDYLAI TL EI + ++ N G + + + Sbjct: 132 PTLRLRGDYLAIVTLGFGEIVRILMRNLDRPLNITNGPKGISAIDPVTLFGLKFSGMHSW 191 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 YY+ + L + L L+ + + AW IR+++ A ++ KL Sbjct: 192 FGIRFSSLYLYYYLFAALLLLILFVCLRLQHSRVGRAWTAIREDEDAARAMGINTRNFKL 251 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 AFA+ + F G+AGA FAA + +SP+ F E+I V+++V+LGGM + + +L Sbjct: 252 LAFAIGATFGGVAGALFAAFQGFVSPESFTLQESIAVLAMVVLGGMGHIPGVILGALLLA 311 Query: 293 GVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + EL +L + +AL LV+L R L R Sbjct: 312 ALPELLRSTMGPLQQALFGQVWIDPEIIRQLFYGLALILVMLYRPAGLWPAR 363 >gi|325694984|gb|EGD36888.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK150] Length = 317 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LL+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KINIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + ++ + + A+I+G + +GLP+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLLGAVIAGIVALAVGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + L R+ I + ++R+++ A S+ K++AF + + +AG+ Sbjct: 161 YIFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL S Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305 >gi|300811660|ref|ZP_07092136.1| amino acid or sugar ABC transport system, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497361|gb|EFK32407.1| amino acid or sugar ABC transport system, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 324 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 73/339 (21%), Positives = 139/339 (41%), Gaps = 43/339 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 KY+ +L V L+ + A +I++M + I I ++ A GL++V+G G SL Sbjct: 6 KYNLCWLILMVAGFYLINTLMLAGVINTFIENMLVTIGINIILAVGLNLVIGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 A+GAY+ I+ + +L + V +IS +++G+P+L+ GDY AIAT+ Sbjct: 66 HAGFMALGAYATGIMTQTMNTAGGFYLSVLVGVVISIVVALLVGIPTLRLHGDYFAIATM 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EI + ++ K + + V+ Sbjct: 126 GAAEIIRIVINNMKITNGAAGLFNIPQFATWD--------------------------VV 159 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L+ + + + A +IR+N+ A ++ KLSAF + +A +AG+ Sbjct: 160 YIFVCLTTIVTVNFIHSRDGRAVISIRENEIAAEAMGVNTTKWKLSAFVLGAATAAIAGS 219 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A+ I P F E+I ++ V+LGG+ S++ AT +L + + Sbjct: 220 LYASYLQTIVPSTFGIMESINILIFVVLGGLGSITGTFVATTLLGVLDAALQSL------ 273 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + +AL ++++ + L S Sbjct: 274 ---------GVLRMVFYAVALIIIMIFKPGGLFGKWEFS 303 >gi|284047403|ref|YP_003397742.1| inner-membrane translocator [Acidaminococcus fermentans DSM 20731] gi|283951624|gb|ADB46427.1| inner-membrane translocator [Acidaminococcus fermentans DSM 20731] Length = 326 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 73/349 (20%), Positives = 137/349 (39%), Gaps = 41/349 (11%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M L+K D + + V+ ++ + Y ++ I ILI ++ A L+++ Sbjct: 1 MKSLRQSLHKQDLLGLGIMVILFVVFYFLFDEEILDDYWETNVILILINIIMAVSLNLIN 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G S+ A+GAY+ I+ + G+ + + V+ + + G ++G+P+L+ GD Sbjct: 61 GLTGQFSIGHAGFMAVGAYTSAIITVKLGMDFPIALIVATVSAAFLGFLIGMPTLRLNGD 120 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLAIATL + EI + ++ + G +G RL Sbjct: 121 YLAIATLGLGEIIRIAILNIDYV-GGASGFMGIPRLTTFP-------------------- 159 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + + I + +A A IR+N+ A ++ K+ AF + + Sbjct: 160 -----IAFWIMVFVVYFIKNFKNSADGRACLAIRENEIAAETMGINTTKYKVMAFTIGAG 214 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G AGA F+ P F F + V+++V+LGG+ S+S +L + Sbjct: 215 FAGTAGALFSHYYYIAHPASFTFMRSFDVLTMVVLGGLGSISGSISGAVLLTAISAALAD 274 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + I L +++L R + + S + Sbjct: 275 Y---------------PEWRMVIYSIVLIVLMLNRPQGIFGNKELSLKM 308 >gi|316933491|ref|YP_004108473.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315601205|gb|ADU43740.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 406 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 125/346 (36%), Gaps = 15/346 (4%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 +K+ I L+ + L + Y + + IY +FA G +I+ G G LS Sbjct: 5 SKFADIALLIGFAVMVALGPIIFTPIGAGY-PDLLQKFAIYGIFAIGFNILFGLTGYLSF 63 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +G+Y+ V + + + S +++G + +G SL+ G Y +I TL Sbjct: 64 GHAAFLGVGSYAAVWSFKLVSMELLPAVAFSVVLAGILALAIGFVSLRRSGIYFSILTLA 123 Query: 129 MSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +++ N+ PITNG+ G+ V + I +Y+ Sbjct: 124 FAQMCYNMAYSVLTPITNGETGLRVLRDDPRVLDAAIGYASPMPSLFGLTITGWTGFYIC 183 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + + + + R+ R I+ NQ + LSAF +S F G+AGA Sbjct: 184 GAVLVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYSTRPYLLSAFVISGMFAGLAGA 243 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA+ + +++ + V+ + ILGG +L T I+ + N Sbjct: 244 LLAATDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVVGTGIIKYFENIFSAYNDQQLA 303 Query: 308 SLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340 F + + V++ ++ Sbjct: 304 KFFAFLPDGFREGVVSVTSLFVGEGWHLTLGLLFMAVVIFLPGGVM 349 >gi|297190909|ref|ZP_06908307.1| branched-chain amino acid ABC transporter permease [Streptomyces pristinaespiralis ATCC 25486] gi|297150672|gb|EDY66612.2| branched-chain amino acid ABC transporter permease [Streptomyces pristinaespiralis ATCC 25486] Length = 419 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 64/324 (19%), Positives = 126/324 (38%), Gaps = 16/324 (4%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY---------- 81 ++ G+ + + A G++++ G+ G LS+ AIGAY Y Sbjct: 91 PFYLDRFWLQAGLFAMAAAIGAIGINLLTGATGQLSMGHAFFLAIGAYGYCVLAGGNDVE 150 Query: 82 -VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 GL WL ++ +++G G + + + RG YL IATL + + Q++L Sbjct: 151 SGHELVGLGLPTWLAAVLAVLLAGLAGGVFSPIAGRLRGAYLGIATLALIFVGQHVLFNA 210 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T G G V F S + P + ++Y L + Sbjct: 211 RDLTGGFNGRSVPPLSLFGFEFDDSELLVAAVPFQSMEK---LWYAALVALLVCGLFARG 267 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + R A +RD++ A + + + + F +SS + G+AG A R P+ Sbjct: 268 VLRGRPGRAMNALRDHRIAAGVMGVPVARYRAAVFVLSSMYAGLAGVLLALIFQRTVPEY 327 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNM 318 F ++ ++++++GG+ S++ + + ++ + ++ S Sbjct: 328 FGMILSLEYLAMIVIGGLGSVAGAVVGAIFVSLLPQVLTRWSDALPLVSAPGTGGVSPGE 387 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 L A+ V+L L RL Sbjct: 388 ASRYLYGAAVVAVVLFLPGGLTRL 411 >gi|256111710|ref|ZP_05452694.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid [Brucella melitensis bv. 3 str. Ether] Length = 907 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L L + ++ + I I ++ + +IV G G +SL + Y IG Sbjct: 320 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 379 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ G+S W + + A I+ GM++ P + +G + ++A++ E+F+ + Sbjct: 380 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 438 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +T G G+ + +L ++ R ++ GM ++ +I Sbjct: 439 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 484 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +RR+ + R+ + A + + +L A A+SSA M G F A I Sbjct: 485 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 544 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P MF + +I + ++GG+ +++ +L+ + E L F Sbjct: 545 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 600 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + L LV+L + ++ Sbjct: 601 ------VYGLVLILVVLFMPNGIMG 619 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 18 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L A + + +I + G + Sbjct: 78 LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + A R + ++ A + + Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + + + ++ L+++++ L Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285 >gi|260426288|ref|ZP_05780267.1| high-affinity branched-chain amino acid transport system permease protein livh [Citreicella sp. SE45] gi|260420780|gb|EEX14031.1| high-affinity branched-chain amino acid transport system permease protein livh [Citreicella sp. SE45] Length = 598 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 64/329 (19%), Positives = 130/329 (39%), Gaps = 26/329 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L+AV L + + +++ + I I I+ + +IV G G LSL I Y Sbjct: 19 LGLIAVAVLLAGLVAVPVAVGDQFVYHIFITICIFAALSTAWNIVGGYAGQLSLGHAIFY 78 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y+ ++ G+S W+ + A ++ +++ P + G + A+AT+ E+F+ Sbjct: 79 GIGGYA-GVILVNLGISPWIGMFAGAAVAVVAAIVVSWPCFRLHGPFFALATIAFLEVFR 137 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + ++ +T G G+ + ++ + R + + GM + Sbjct: 138 VLALHFRELTGGATGLMIPLKIGWEWMVFRER--------------LPALLIAFGMLLVC 183 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ +R + R+ + A + + +L A AVS+A M G F A Sbjct: 184 LAVAWAIRSHRLGFYLVATRERESAAKAAGVGTVKVRLMAVAVSAALSAMVGTFHAMYLT 243 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I P+ MF +I + ++GG+ ++ +L+ + E G L F Sbjct: 244 FIEPESMFSLQFSIQIAMFALIGGIGTVWGPLLGAMLLVPITEFARGALGSEAIGLHGFV 303 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L + + ++ L Sbjct: 304 YGVVLMLVVLFL----------PNGIMGL 322 >gi|148254334|ref|YP_001238919.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146406507|gb|ABQ35013.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 334 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 65/313 (20%), Positives = 124/313 (39%), Gaps = 24/313 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 Y+ ++ + L+Y + +I+ G G +SL + + +GAY+ IL +++G+ Sbjct: 27 PLFVKDVYVQNIMVLTLMYAALSQSWNILSGYCGQISLGHALYFGLGAYTTAILFTKFGV 86 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W + +IS M +G P + G Y IAT++++EI + W Sbjct: 87 LPWFGMLAGGLISALIAMALGYPCFRLGGHYFVIATIVIAEITLLLFQNWDWAGAALGID 146 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R +L ++ +Y L + ++ + WL + W Sbjct: 147 IPVRRDSWLTFQFTR-------------SKLPYFYFALALACVAWFVTWWLEDSKWGYWW 193 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIV 269 R ++DN A SL + +K+ A AVS+ + + G+F+A I P+ F ++++ Sbjct: 194 RAVKDNPVAAESLGVDVFNSKMGAAAVSAFLVAIGGSFYAQFVSYIDPESVMGFQFSLLM 253 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +LGG+ +L ILI + EL + + + Sbjct: 254 ALPAVLGGIGTLWGPMLGAVILIPLTELTRSYIGGSGRGV----------DLIVYGGLII 303 Query: 330 LVILMRSHSLLRL 342 + L R L+ L Sbjct: 304 AISLARPQGLVSL 316 >gi|307301511|ref|ZP_07581271.1| urea ABC transporter, permease protein UrtB [Sinorhizobium meliloti BL225C] gi|306903568|gb|EFN34156.1| urea ABC transporter, permease protein UrtB [Sinorhizobium meliloti BL225C] Length = 537 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 94/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S L S I+ ++ Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLAIALPLAFLVT 317 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + S Sbjct: 318 GAVGLALER--GVIRFLYGRPLETLLATWGISLILQQTVRTIFGPTNREVGNPSW-MSGA 374 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + A+++ L++T + R + N++ S+ + Sbjct: 375 FELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSMGIRTPWVD 434 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S G+AG A S+ I +V+ GG+ +L L Sbjct: 435 ALTFALGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFSL 492 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L+++ + L I R L L+ + Sbjct: 493 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 536 >gi|319796244|ref|YP_004157884.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315598707|gb|ADU39773.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 358 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 78/320 (24%), Positives = 138/320 (43%), Gaps = 20/320 (6%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L+ FL ++Y + +LIY + GL ++ G G S+ GAY+ Sbjct: 27 LLIAFLIAAPWVIEEYWLAQLTFVLIYGIVGLGLMLLAGFTGQFSIGHAAFLGAGAYTQG 86 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L G+ + + +A +S A G+++ LP+L+ +G YL IATL I + + +W+ Sbjct: 87 VLT-NLGVPFPIALIAAAALSAAVGVVVALPALRVKGIYLGIATLSFGFIVEEVFARWES 145 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G AG++V F + Y++ L + LS IL L Sbjct: 146 VTGGNAGLHVKSPQLFGWSLGSGDG---------------FYFLCLVVAVLSTLGILNLL 190 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ A+ IRD++ + S+ + K +FA+S+A G+ GA +A ISPD F Sbjct: 191 RSPTGRAFVAIRDSEISAQSMGIHLARYKTMSFAISAALAGLGGALYAHKLSFISPDQFS 250 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 ++I ++ +V++GG+ S+ LI + +L + L Sbjct: 251 ILQSIDLLLMVVIGGLGSVHGAFLGAIFLIAMPQLIS----MGKDWLPAVIGQAPGLQGL 306 Query: 323 LMVIALFLVILMRSHSLLRL 342 + + L +L L Sbjct: 307 VYGVVLIAFVLFEPLGLYGR 326 >gi|239623759|ref|ZP_04666790.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521790|gb|EEQ61656.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 357 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + + +++ + +G + + + IYV+ A L++ VG LG LSL Sbjct: 15 ITYGIVIAAYIIMQVLVGTGHVSSLLKGLLVPFCIYVIMAVSLNLTVGILGELSLGHAGF 74 Query: 74 YAIGAYSYVILGS------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +GA++ + LS+ + I + A + GM++G+P L+ RGDYLAI TL Sbjct: 75 MCVGAFAGALFSKCMKGSINPTLSLVIAIVIGAAAAAVFGMLIGIPVLRLRGDYLAIVTL 134 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI +N++ + L I + + + Sbjct: 135 AFGEIIKNLVNAIYLGRDASGFHISFKDSMSLKLEEGGEILIKGAQGITGTPQAATFTIG 194 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + ++ I++ L + A IRDN+ A S+ I KL AF++S+ G+AG Sbjct: 195 VILVLITLFIVMNLVNSRTGRAIMAIRDNRIAAESIGINITKYKLLAFSISAGLAGVAGV 254 Query: 248 FFAASRDRISPD--MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 +A + ++ F ++ +I+++ V+LGG+ S+ AT IL + E+ G++ Y Sbjct: 255 LYAHNLTTLTAQPKNFGYNMSIMILVYVVLGGIGSIRGSVIATVILYLLPEMLRGLSNY- 313 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + I L L +L Sbjct: 314 --------------RMLMYAIVLILAMLF 328 >gi|328957955|ref|YP_004375341.1| high-affinity branched-chain amino acid transport system permease protein [Carnobacterium sp. 17-4] gi|328674279|gb|AEB30325.1| high-affinity branched-chain amino acid transport system permease protein [Carnobacterium sp. 17-4] Length = 324 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 71/342 (20%), Positives = 143/342 (41%), Gaps = 42/342 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 NK + + L+ + + + + ILI ++ A GL++++G G S Sbjct: 7 FNKKNLGWLIFIAAIYTLIQIGTTTGIINAFYEITLMTILINIILATGLNLIIGFSGQFS 66 Query: 68 LNCVIAYAIGAYSYVILGSRYG--LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L AIGAY I+ +Y L + I + +++ +++G+P+L+ +GDYLAIA Sbjct: 67 LGHAGFMAIGAYCTGIISIKYPTVLGLIGGILLGIVVASIVALLVGIPTLRLKGDYLAIA 126 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++EI + +++ +TNG AG+ + Sbjct: 127 TLGVAEIIRIVILNMDEVTNGAAGLSGIPFIANWQ------------------------- 161 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + +S I++ +++ A +IR+++ A S+ K+ AF + +A +A Sbjct: 162 ITFAFIIISMIILINYIKSSPGRATISIREDEIAAESMGINTTKYKIIAFVLGAASAAIA 221 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G A+ I P F F +++ ++ IV+ GG+ S++ A +L + Sbjct: 222 GGLHASYFSVIRPSDFTFMKSVDILIIVVFGGLGSMTGSVVAAIVLGILNVYLQ------ 275 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F + +AL +++ + LL + + Sbjct: 276 ---------PFGQLRMIIYSVALVAIMVFKPSGLLGTKEFTI 308 >gi|108759926|ref|YP_634780.1| putative branched chain amino acid ABC transporter permease [Myxococcus xanthus DK 1622] gi|108463806|gb|ABF88991.1| putative branched chain amino acid ABC transporter, permease protein [Myxococcus xanthus DK 1622] Length = 330 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 58/333 (17%), Positives = 115/333 (34%), Gaps = 13/333 (3%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ +L LF + + + + ++ A L+IV G G S+ A+GA Sbjct: 1 MLLALPVLVLFQWLMSDAPFASYLLSVVGVNIILAVSLNIVNGMTGQFSIGHAGFMAVGA 60 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y +L V+ + LA A ++ + Sbjct: 61 YISGVLSLNLK-------DVALSFLPVAVSDQVFFVVSLLVGGLAAALCGFLVGLPSLRL 113 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + G R+ T + ++V L + Sbjct: 114 RGDYLAIVTLGFGEIIRVVVQNTDAFGRALGLSGIPQTSSPAMVYFFVFLT-----VLVA 168 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + ++ + IR+++ A ++ K+ AF +SS F G+AGA FA I+P Sbjct: 169 RRITGSSHGRSLWAIREDEVAAEAMGVDTTGYKVRAFVISSFFAGIAGALFAHFVPIINP 228 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F F +++ ++ +V+LGG+ S + A L + E + F + + Sbjct: 229 GSFTFVKSMEIVVMVVLGGLGSTTGAIVAATFLTLLPEGMRSL-FTLLGAEGSLAQKVDQ 287 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L ++L R L + + L R Sbjct: 288 IRMPVYGLLLVALMLARPQGLFGTKEIWDVLPR 320 >gi|24380045|ref|NP_722000.1| putative branched chain amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|290579976|ref|YP_003484368.1| putative branched chain amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|24378036|gb|AAN59306.1|AE014996_9 putative branched chain amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|254996875|dbj|BAH87476.1| putative branched chain amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 318 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 73/339 (21%), Positives = 141/339 (41%), Gaps = 42/339 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L ++ LLF + A Y + + I I ++ A G ++V+G G LSL Sbjct: 6 KANITWLALVLIIFFLLFGLISAGIIDIYYTQILMGIGISIIMALGTNLVLGFSGQLSLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ IL ++ +L I V +++ +++G+P+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYATAILTTQNPTYAGFYLSIIVGMIVTATVALVVGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++EI + ++ +TNG GI + + V+ Sbjct: 126 GVAEIIRKLIENGGDLTNGSRGIMGI-------------------------LKYTTWPVV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L +L R+ + +R+++ A ++ K+ F +++ +AG+ Sbjct: 161 FVFVVLITIFVLNYLRSPMGREVLAVREDEIAAEAMGVNTTKIKVLTFMIAAVISSIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + ++P F ++I + + +LGG+ S++ A +L + + Sbjct: 221 LYVGYIGTVAPKDFTIMKSIDFLIVAVLGGLGSVTGTIVAAVVLGILNMFLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + +AL LV++ R LL S Sbjct: 275 ---------SDIRMIIYSLALILVMVFRPGGLLGTWEFS 304 >gi|311104703|ref|YP_003977556.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310759392|gb|ADP14841.1| inner-membrane translocator 21 [Achromobacter xylosoxidans A8] Length = 611 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 99/275 (36%), Gaps = 22/275 (8%) Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S +GAY+ L ++Y +S WL +P +++ ++G +L+ G YL + T Sbjct: 54 SFGQAAFVGLGAYTTAFLTTQYDVSPWLALPAGLVLTAVVAYLLGAITLRLSGHYLPLGT 113 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + + GI + + G ++ S +YY+ Sbjct: 114 IAWGLSLYFLFGNIDWL-GKHDGIAGIEPISIFGMSLASGRH--------------IYYL 158 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + L+ L + A R ++ S+ K+ F ++ ++G Sbjct: 159 IWVFVLLALWATRNLLNSRPGRAIRALKSGAGMAESMGVNTAAYKVVIFVWAALLACVSG 218 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A + +SP F + I + + ++GG + +++++ + + + Sbjct: 219 WLYAHMQRAVSPSPFGINYGIEYLFMAVVGGAGYVWGALLGSSVILVLKDQLQNLLPKLL 278 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ F + + L L++ + L Sbjct: 279 DTNANF-------EMIVFGVLLILMLQYARNGLWP 306 >gi|317405120|gb|EFV85465.1| ABC branched chain amino acid family transporter [Achromobacter xylosoxidans C54] Length = 643 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 99/302 (32%), Gaps = 15/302 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL + L G Y+ ++ I+ L + + A + I+ G G L+ + + Sbjct: 26 LLWLAIACLALTVAGPWLFDTYLLNVLIKALFFAVAAVTVDILWGYTGYLTFGQSAFFGV 85 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ + + YG S + + + + GA ++ + + + I Sbjct: 86 GAYAAGLAFTHYGFSPGIALAAALVAVGAAALLALATGWLSFYRGASPFFATVISLVLPI 145 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ ++ G +F + Y + G + A Sbjct: 146 VLTQVALSGGT---------------YTGSSSGLTGYDTFDLSLEAWYVIAAGGLSIVAL 190 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + R+ +RDN+ L +++ V A +AG + A + Sbjct: 191 LAWVAVRSDGGRILAALRDNEGRCSYLGLNTAHWRIALLVVCGAVASLAGFGYGAFSGVV 250 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P++ F +I V LGG ++ ++ G + + +L Sbjct: 251 APELTGFVFGTELIIWVALGGRGTVWGPVLGAVLINVAGSYLSGNMPFLYQLVLGVTFML 310 Query: 317 NM 318 + Sbjct: 311 VI 312 >gi|256828425|ref|YP_003157153.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256577601|gb|ACU88737.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 345 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 135/358 (37%), Gaps = 45/358 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +N+ IL +V L LFL+ Y + I + ++ A L+++ G G+ S Sbjct: 1 MNRNTTILLNFVLVGCLGLFLWWAEGNLDGYKIQILNLIAVNIILALSLNLIYGFTGMFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGACGM 108 L AIGAY IL + + +++ G+ Sbjct: 61 LGHAGFMAIGAYVCSILIMTPDQKATLFILQEAFPLVQNSHAPFLVAVIAGGLVAALFGI 120 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 ++G P L+ DYL IATL +EI + I +TNG G L Sbjct: 121 VIGAPLLRLGDDYLGIATLGFAEIVRVIGNNIPRVTNGALGFKGIPDHANLWWNF----- 175 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 G C L+ ++ + + N ++ IRD++ A ++ + Sbjct: 176 --------------------GWCLLTLYFVIRIVNSNTGNVFKAIRDDETAAKAMGINVF 215 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 KL +F + F G+ GA A+ I P MF F+ V+ IV+ GG+ S++ A Sbjct: 216 KIKLLSFTFGAFFAGVGGALLASLLTTIDPKMFLFTLTFSVLMIVVTGGLGSITGSILAG 275 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + V+E + D + + L LVIL R ++ +R + Sbjct: 276 TGITVVLEWLRIVENPITIGDWSMD-GIPGMRMVVFSLVLILVILFRREGIMGMREIT 332 >gi|192289834|ref|YP_001990439.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192283583|gb|ACE99963.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 381 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 131/291 (45%), Gaps = 17/291 (5%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y S + +LIY + ++++ G G +S+ AIGAYS + +YGL Sbjct: 36 PYVLESYYLSQLVFVLIYAIVGIAMNVLSGQAGQVSIGHAAFMAIGAYSAAV-AEKYGLP 94 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + ++ +G G ++GLP+L+ G YLAIATL + I + I+ +W+ +TNG G+ Sbjct: 95 LPVYLVLAGGFTGLIGYLVGLPALRLHGIYLAIATLAFAFIVEEIVTRWESVTNGNEGLM 154 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + YY+ LG+ + + + R+ A+ Sbjct: 155 LGAPS----------------LFGLKLGAQGFYYLCLGVTVVVILAAINILRSPTGRAFL 198 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IRD++ A S+ K AFA+S+AF G+AG +A ISP+MF S +I + Sbjct: 199 AIRDSETAARSMGIDTARYKTRAFAISAAFTGLAGVLYAHKLSFISPEMFSLSMSIEFVM 258 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 I+I+GG+ SL +I V + + L + Sbjct: 259 IIIIGGVLSLRGAVFGAIFMIMVDPILIVVKDKVPQLTLAAMQGIGLSDQL 309 >gi|148254436|ref|YP_001239021.1| branched chain amino acid ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] gi|146406609|gb|ABQ35115.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 583 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 98/328 (29%), Gaps = 29/328 (8%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ +V + + Y+ ++ ++ + A + I+ G G L+ Sbjct: 1 MIVPAVLVAIAAGVIIIAPLLLDTYLVNILVRACFVAIAAITVDIMWGYCGTLTFGQSAF 60 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 + IGAY+ I+ + YG W + A + + + Sbjct: 61 FGIGAYALAIMFTEYGFGPWQICAAIAAAVAVAAAVAAFTGWLSFYPGSTPLYASVISLV 120 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 I++ + G SF + + Sbjct: 121 VPIVLVQILYSGGT---------------FTGSSSGLVGFESFDLEIETWLRLAGLGLLA 165 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 +A + L L R+ +RDN L ++ +S+ +AG F+A Sbjct: 166 TAVLALGLMRSDTGRLLSALRDNDARCSYLGIDTSRLRIIVLVLSAIVSALAGFFYAGFG 225 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +P+ F+ ++ +V LGG ++ + Y + Sbjct: 226 AVAAPENASFTFGTNLVIMVALGGRGTVIGPVIGALCIEVASAYLANSLPYVWE------ 279 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ +AL +VIL LL Sbjct: 280 --------LIVGLALIIVILAFPDGLLG 299 >gi|325522953|gb|EGD01393.1| ABC transporter related protein [Burkholderia sp. TJI49] Length = 611 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 108/333 (32%), Gaps = 34/333 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L L + A + QI IY ++ G++++V GL+ + + Sbjct: 11 VAVLTLSLIVVSLALTATGTPLERATQIAIYTLYGMGVNLLVAYTGLVPFGASVFFGTAT 70 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y + R + L + S +++ ++G L+ RG Y ++ TL S+I I Sbjct: 71 YLVAVSLLRVLGNEVLALAASVIVTTVLAALIGAIVLRRRGLYFSLLTLACSQIAFEIAF 130 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 KW +T G+ G+ R F + + A ++ Sbjct: 131 KWTDVTGGENGLQNVPRPTF-------------------VTAAAFHVFACVTVIAVAWLL 171 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + A + +RDN++ SL KL AF +S+A IG AG Sbjct: 172 WRIVHAPFGRALQALRDNEQRAASLGYDTYRLKLRAFVISAAVIGYAGGLLCLMLQGAYA 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + + + +LGG+ I + + + +++ Sbjct: 232 NNLSWEHAGDSLLMTVLGGVHQFLGPLWGAIAFILLEDKLSSLTEHWW------------ 279 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + + R Sbjct: 280 ---LIFAPIVIAFAFFSPEGIHGIVQRVLRRSR 309 >gi|239624979|ref|ZP_04668010.1| ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239521365|gb|EEQ61231.1| ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 322 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 133/312 (42%), Gaps = 29/312 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + Y ++ IQ+LI ++ GL+ + G G ++L +++GAY+ +L ++ GL Sbjct: 22 PMFITNNYHLNLMIQVLINIIIVVGLNFITGLTGQMNLGTAGIFSMGAYTSSLLATKLGL 81 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + W+ + + + GM +G PSL+ G YLA+ T+ SEI + ++ +T G G+ Sbjct: 82 NPWICLVAAVGMGCLIGMGLGYPSLRVSGVYLALTTIGFSEIVRILMTNLTGLTGGALGV 141 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 G +S +YY+ L + L + + ++ Sbjct: 142 TGIPTFSIFGFKFQSNKE--------------IYYLYLVIAVLLIFNAYRIVNSKWGRSF 187 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 ++DN A + I K+ AF +++ + +AG+ ++ I+P + +I + Sbjct: 188 LAVKDNPDAVEAGGVNIANIKIMAFTLAAIYATIAGSLYSHYVGFINPSAYNLEFSINYV 247 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++++GG+ S+ ++ V E M YY+ + I L Sbjct: 248 VMLVIGGIGSVPGNVLGAILVTLVPEFLRFMENYYW---------------LVFSIITLL 292 Query: 331 VILMRSHSLLRL 342 ++ + ++ L Sbjct: 293 FVIFLPNGIVSL 304 >gi|289432738|ref|YP_003462611.1| inner-membrane translocator [Dehalococcoides sp. GT] gi|288946458|gb|ADC74155.1| inner-membrane translocator [Dehalococcoides sp. GT] Length = 350 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 143/323 (44%), Gaps = 16/323 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ L+ LF Y + + I V+ A GL+I++G G LS+ A+GA Sbjct: 26 AMLIGFLILLFSLPFNINSYWLGILNLVGITVIAAAGLNILMGYCGQLSVGHAGFIAVGA 85 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL ++ G+ + S +++G G++ GLPSL+ +G YLAI+T+ I ++ Sbjct: 86 YTTAILANKLGVPFPFDMIASGIMAGLVGVLFGLPSLRVKGFYLAISTIAAQFIIIWVIN 145 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI + + + +++++ + L+ + Sbjct: 146 HWSGLTGGFNGIVIPP---------------INLFNFDFTTQGSQFFIIMLVAVLAIFFM 190 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + RT I A+ IRDN A + + KL AF + G+AG+ A ++ Sbjct: 191 KNIARTRIGRAFVAIRDNDLAAEVMGINVFRYKLLAFFIGCFLAGVAGSLMAHWIGYLTA 250 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F S++I+ + IVI+GG+ + T + + + ++ ++ + F Sbjct: 251 ENFTLSDSILYVGIVIIGGLGTGVGPILGTLFIRLLQQGVQYVSPLMGSAFPQLPSGFAA 310 Query: 319 -RHTTLMVIALFLVILMRSHSLL 340 + +A+ L +++ L Sbjct: 311 GLGPMVFGLAIVLFLVLEPRGLA 333 >gi|226307971|ref|YP_002767931.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226187088|dbj|BAH35192.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 362 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 69/327 (21%), Positives = 137/327 (41%), Gaps = 22/327 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L V+ + L A++S + + I + GL+IV G GLLS+ + Sbjct: 32 ILQLVLLVAAVCALLLASQSAPFRVGQFTSVFIIAIAIAGLNIVSGYTGLLSIGHSAFFG 91 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+ +L G S IP++ ++ G+++GLPSL+ +G YLA+ TL ++ F Sbjct: 92 LGAYTTGVLIVDRGYSPLTTIPMAVVLCFVLGLLVGLPSLRIKGLYLALVTLAVAVAFPE 151 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ K +T G AG+ V L + +++++V + + Sbjct: 152 VIRKTGDLTGGAAGMVVRANLLVPPKWTG---------LTRADTYLWIFWVSVVTLAIVM 202 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +I L ++ A +RDN+ A + + K+ AF +S A G+AG+ F Sbjct: 203 LLIRNLVKSRFGLAMVAVRDNEIAASANGINVARVKILAFGLSGAITGLAGSLFTMYIGA 262 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +SP+ F ++I I+ ++LGG+ + ++ + + + Sbjct: 263 LSPESFSLMKSIEFITGLVLGGIATQFGPIVGATAVVFLPYYTGSVTDGPVSG------- 315 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + L ++ + ++ Sbjct: 316 ------VVFGAVLIAIVFLMPDGIVGR 336 >gi|291534912|emb|CBL08024.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Roseburia intestinalis M50/1] gi|291539476|emb|CBL12587.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Roseburia intestinalis XB6B4] Length = 358 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 71/330 (21%), Positives = 130/330 (39%), Gaps = 24/330 (7%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + +V L++ + + A + + + + Y + A GL++ VG LG LS+ Sbjct: 18 ITFAMVIVAYLIVQILIAAGVLSSLMQGLLVPMCTYSIVAIGLNLCVGYLGELSIGHAGF 77 Query: 74 YAIGAYSYVILGSRYGLS-------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 +GA+S ++ + + G ++G+P L+ RGDYLAI T Sbjct: 78 MCVGAFSSAFATKLLQNVIPNQIILFITVLIIGTAAAAFFGFLIGIPVLRLRGDYLAIVT 137 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI +N++ + + + + I + + Sbjct: 138 LAFGEIIKNVINVLYIAKDTDGFHFAISNGNAIKLSDEGEWLINGAKGIAKIPHLSSFTA 197 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + M + I+ L + A IRDN+ A S+ I KL AF +S+A G G Sbjct: 198 GVIMILICLFIVYHLVNSRSGRAIMAIRDNRIAAESVGINITKFKLMAFTISAAIAGAGG 257 Query: 247 AFFAASRDRISPD--MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 +A + ++ F ++ +I+++ V+LGGM S A IL + E+ G++ Y Sbjct: 258 VLYAHNLSTVTATPANFGYNMSIMILVFVVLGGMGSFRGSIIAAVILTLLPEVLRGLSDY 317 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + I L ++L Sbjct: 318 ---------------RMLIYSIVLIAMMLF 332 >gi|116253481|ref|YP_769319.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258129|emb|CAK09230.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 550 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 94/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY+ ++ + L S + + Sbjct: 271 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYVVQEYITSAFPELADYSLAFAVPAAFVFT 330 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + + + Sbjct: 331 GFVGLVIERA--VIRYLYGRPLETLLATWGVSLILQQAVRSIFGPTNREVRNPTWMSGV- 387 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + +++L L+R+A R + N++ S+ + Sbjct: 388 FDLGGLSITWNRLWIIVFSMVVFVALLLLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 447 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S G+AG A S+ S I +V+ GG+ +L L Sbjct: 448 AFTFALGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALSL 505 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 V + L+++ + L I R L L+ + Sbjct: 506 GVVNKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 549 >gi|268679118|ref|YP_003303549.1| inner-membrane translocator [Sulfurospirillum deleyianum DSM 6946] gi|268617149|gb|ACZ11514.1| inner-membrane translocator [Sulfurospirillum deleyianum DSM 6946] Length = 345 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 71/356 (19%), Positives = 134/356 (37%), Gaps = 45/356 (12%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I+ A+V + F++ +Y + I I+V+ A +++ G G SL Sbjct: 9 IVLKSAMVLGFVWFIWFANGHFDEYTIRILNNIAIFVILAVSYNLINGVTGQFSLEPNGF 68 Query: 74 YAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 AIGAY + + + + +S + + +++ P Sbjct: 69 VAIGAYVTALLLISPDNKSYQYAIEDPYPFIMTLESNFVVALLLSGLFAMLLALVLSFPV 128 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + RGDYLAI TL I + + I +TNG G+ Sbjct: 129 FRVRGDYLAIVTLGFGFIIKILAINHPAVTNGSLGLNDIPEFSN---------------- 172 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 Y G+ +S ++L + + A + +RD++ A ++ AK A Sbjct: 173 ---------LYWTGGLAIVSVIVVLNIINSKFGRAMKAVRDDEDAAIAMGVNTFKAKTFA 223 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F S+ F G+ G AA ISPD+F F ++ I++LGG+ S + T +++G Sbjct: 224 FCTSAFFEGIGGGLLAALLTSISPDLFDFFFTFQLLIIIVLGGLGSTTGAIIGTVLVMGG 283 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 E ++ N + + + L ++L ++ R ++ + Sbjct: 284 SEWMRFLDEP-MNLFGYETVAMPGMRMVVFSLILIFIMLFAREGIMGKRELTDLFK 338 >gi|187922086|ref|YP_001893728.1| ABC transporter [Burkholderia phytofirmans PsJN] gi|187713280|gb|ACD14504.1| ABC transporter related [Burkholderia phytofirmans PsJN] Length = 604 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 105/331 (31%), Gaps = 29/331 (8%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + +V L + G Y ++ + L+Y A + ++ G +G+L+ Sbjct: 9 RRTLRPVAIIVLVGALLVGFGPVVLDSYSVNVLTRSLLYAAVALTVDLLWGYMGILTFGQ 68 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +AIGAY+ ++ + G S WL + + A + L + Sbjct: 69 SAFFAIGAYTSGLIFTHIGFSPWLALAALVLGVLAAMAVAALVGWLAFWHGATNLYASVI 128 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + I+ + G SF + +++ G Sbjct: 129 TLVLCIVCTQVIFSGG---------------NFTGSSSGLTGFDSFDLSMQAWFWIAGGF 173 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + L + IR+N++ L K +AF SA +AG +A Sbjct: 174 LIVVTAGAWLLVHSDAGRILIAIRENEQRCEYLGLNTALLKTTAFLGCSAVGAVAGYLYA 233 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 +SP++ F ++ LGG +L T ++ G Y + Sbjct: 234 NYSMLVSPELAGFVFGTELVIWTALGGRATLLGPIFGTMLVDYESAQLSGDFPYVWK--- 290 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ +VI+ LL Sbjct: 291 -----------LLIGSIFVIVIIAFPRGLLP 310 >gi|256544601|ref|ZP_05471973.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Anaerococcus vaginalis ATCC 51170] gi|256399490|gb|EEU13095.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Anaerococcus vaginalis ATCC 51170] Length = 326 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 70/336 (20%), Positives = 138/336 (41%), Gaps = 45/336 (13%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L +V ++ + + + Y S+ + I ++ + L+I VG+LG ++L + Sbjct: 13 FVLVLVSFAIIQILILSGIIDSYWQSILFLLCINIILSISLNITVGNLGQITLGHAGFMS 72 Query: 76 IGAYSYVIL----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IGAYS I ++ + + + + + +G+P L+ GDYLAI TL E Sbjct: 73 IGAYSAGIFLKTGIIEGIPGFFIALLIGGLFAFLFSLAIGIPVLRLNGDYLAIVTLAFGE 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + ++ IT G G+ + + ++ + Sbjct: 133 IIRVVVENL-SITGGAQGMAGIP-------------------------TVDSFALVFFVT 166 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L + + + + I+DN+ A S +K+ AF +S+ F G+AGA +A Sbjct: 167 VLCVVFMYSIMTSRFGRSVLAIKDNELAAESCGINTTKSKIFAFTLSALFAGVAGAIYAQ 226 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + I+ D+F ++++ ++ +V+LGGM S + +T L V E+ Y Sbjct: 227 TTGVIAADVFNYNKSFDILVMVVLGGMGSFTGSVISTITLTIVPEILRAFAEY------- 279 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +V++ R L+ S Sbjct: 280 --------RMIIYSVILVIVMIFRPQGLMGREEFSI 307 >gi|126726246|ref|ZP_01742088.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2150] gi|126705450|gb|EBA04541.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2150] Length = 633 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 95/312 (30%), Gaps = 26/312 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLL 95 I+ + A GL+I G +G++++ +GAY+ ++ Y LSI + Sbjct: 343 FLDGLSLASIFFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIIDNYTLSILIA 402 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 IP + ++ A G+ M + + TL+ + L + G + Sbjct: 403 IPAAFAVTFAAGVAMERLV-VRHLYHRPLETLLATFGVSIALQQIAKNVFGTQARPLTSP 461 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + + + + L +T R + Sbjct: 462 ---------DWLGGAWMINDVISISWIRVAIFVLSILFFVMLWFTLNKTRFGMETRAVTQ 512 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N + S+ + F + S G+AG S + V++ Sbjct: 513 NPRMAASMGINPDKINMLTFGLGSGIAGIAGVAIGLFAKVTSELGSDYIVQS--FMTVVV 570 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ A++ + + N + F F + R Sbjct: 571 GGVGNIWGTLAGAAMIGFLQKGIEWFNPSNTLAAQTFMIVFIIIFIQF-----------R 619 Query: 336 SHSLLRLRTPSN 347 ++ LR + Sbjct: 620 PRGIIALRGRAA 631 >gi|73748712|ref|YP_307951.1| branched-chain amino acid ABC transporter,permease protein [Dehalococcoides sp. CBDB1] gi|147669471|ref|YP_001214289.1| inner-membrane translocator [Dehalococcoides sp. BAV1] gi|73660428|emb|CAI83035.1| branched-chain amino acid ABC transporter,permease protein [Dehalococcoides sp. CBDB1] gi|146270419|gb|ABQ17411.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Dehalococcoides sp. BAV1] Length = 350 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 74/323 (22%), Positives = 143/323 (44%), Gaps = 16/323 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ L+ LF Y + I I V+ A GL+I++G G LS+ A+GA Sbjct: 26 AMLIGFLILLFSLPFNINSYWLGILNLIGITVIAAAGLNILMGYCGQLSVGHAGFIAVGA 85 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL ++ G+ + S +++G G++ GLPSL+ +G YLAI+T+ I ++ Sbjct: 86 YTTAILANKLGVPFPFDMIASGIMAGLVGVLFGLPSLRVKGFYLAISTIAAQFIIIWVIN 145 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI + + + +++++ + L+ + Sbjct: 146 HWSGLTGGFNGIVIPP---------------INLFNFDFTTQGSQFFIIMLVAVLAIFFM 190 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + RT I A+ IRDN A + + KL AF + G+AG+ A ++ Sbjct: 191 KNIARTRIGRAFVAIRDNDLAAEVMGINVFRYKLLAFFIGCFLAGVAGSLMAHWIGYLTA 250 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F S++I+ + IVI+GG+ + T + + + ++ ++ + F Sbjct: 251 ENFTLSDSILYVGIVIIGGLGTGVGPILGTLFIRLLQQGVQYVSPLMGSAFPQLPSGFAA 310 Query: 319 -RHTTLMVIALFLVILMRSHSLL 340 + +A+ L +++ L Sbjct: 311 GLGPMVFGLAIVLFLVLEPRGLA 333 >gi|56695920|ref|YP_166271.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56677657|gb|AAV94323.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 400 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 64/369 (17%), Positives = 129/369 (34%), Gaps = 36/369 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKS-------QKYIDSMGIQILIYVMFAWGLSIVV 60 L+K D L ++ + LL L + + + +I+ +FA G +I+ Sbjct: 4 LDKKDTSLLIIVAILTLLAPFILNPFPTGSAMAQFNAGYPDLMQRFVIFGIFAIGFNILF 63 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G LS +G+YS V + ++ I +S +++ +++G SL+ G Sbjct: 64 GLTGYLSFGHAAFLGVGSYSAVWMFKLLSYNVIPAIALSVVVAALFALLIGYVSLRRSGI 123 Query: 121 YLAIATLIMSEIFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 Y +I TL +++ + +TNG+ G+ V + F S Sbjct: 124 YFSILTLAFAQMSFALAYSVLSNPKFNLTNGETGLQVYADDPQIFHRDGLPDMPHLFGLS 183 Query: 176 -----------FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + YY+ + + + + + R+ R ++ NQ+ Sbjct: 184 MRSTYKLDLGAWSFDFNAGYYLCAVIMMVMFYLAIRIFRSPFGMMLRAVKSNQQRMNYTG 243 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 L+AF +S + G+AG AA + +++ + V+ + ILGG +L Sbjct: 244 LNPRPYTLAAFVISGMYAGLAGGLMAAMDPLAGAERMQWTASGEVVLMTILGGAGTLIGP 303 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLV 331 + + +N + F + I LV Sbjct: 304 VLGAGFIKYFENIFSKINDTILHQWFSFLPDGIEDFMVFIVHPFIGKGWHLTLGILFMLV 363 Query: 332 ILMRSHSLL 340 ++ L+ Sbjct: 364 VIFLPGGLV 372 >gi|311741931|ref|ZP_07715742.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311314937|gb|EFQ84843.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 364 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 128/327 (39%), Gaps = 23/327 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 LLAV L + L + + ++ I+ + GL++ G +GLLS+ + Sbjct: 34 ILLAVGAVAALLVILWGSGLGAFNQGQLTRVAIFAIAIAGLNVATGYIGLLSVGHSAFFG 93 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+ +L YG IPV+ ++ G+ +GLP+L+ RG YLA+ TL F Sbjct: 94 LGAYTTGVLVVSYGWDPLTTIPVALVLCFIVGLFVGLPALRIRGLYLAMVTLAFGVAFPE 153 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I+ + +T G G+ L + ++Y++ + + + Sbjct: 154 IIAHFDDLTGGAEGMI---------IRRTDLRPPEWSGFTLGERTQWLYWLCVVVLLIVM 204 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +I L R+ A IR+N+ A + I K +AF VS A G+ G+ FA Sbjct: 205 LLIHNLVRSRYGMAMIAIRENEVAASASGIDIAVMKTTAFGVSGAITGVGGSLFAMYLGS 264 Query: 256 ISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + F I ++ +++GG + S ++ V + Sbjct: 265 LFAEGSFTLLAGITLLIGLVIGGEATRSGPLLGALAVVYVPYYTSDIGQ----------- 313 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 L + L VI + + Sbjct: 314 --GQSAAVLFAVVLIFVIFVAPSGIAG 338 >gi|300311879|ref|YP_003775971.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300074664|gb|ADJ64063.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 358 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 73/345 (21%), Positives = 145/345 (42%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ ++ ++ + F+ + S+ + ++ + L++ + A GL+++ G Sbjct: 18 QIFPIRQDR------IIFTLFMVFAFVGVPLLGSEYWFSAILVPFLVFALAALGLNVLTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GAY+ R + + +S + G++ GLPSL+ +G Sbjct: 72 YAGQLSLGSAAFMAVGAYAAYNFQLRVDGIPIVATLLLSGGCAALVGVLFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL L K+ +N + ++ + Sbjct: 132 YLAVATLAAQFFVVWALTKFPWFSNNSSSGVISTPKIDFF-------------GIAIDTP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +L + + A + L R++ AW +RD A + ++ KL+AFAVSS Sbjct: 179 VRKYLFVLAVVSVLALVAKNLVRSSTGRAWMAVRDMDVAAEVIGIPLMRTKLTAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 + G+AGA +A + PD F + ++ ++I+GG+ S+ +A ++ + Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGSAFILLLPIFLD 298 Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342 L + + H + + ++ H L RL Sbjct: 299 NALPPLAALLHLPFTNATVSHIQMMVFGALIIFFLIAEPHGLARL 343 >gi|158423510|ref|YP_001524802.1| putative branched-chain amino acid transport system protein 1 [Azorhizobium caulinodans ORS 571] gi|158330399|dbj|BAF87884.1| putative branched-chain amino acid transport system protein 1 [Azorhizobium caulinodans ORS 571] Length = 591 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 118/326 (36%), Gaps = 23/326 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + LL S ++ S+ I +Y + A GL ++ G G S I Sbjct: 4 FLPILTLLAAALALQALSGEHAVSVLNYIGLYALVALGLVVLTGITGQTSFGQAAFAGIA 63 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ ++ +++GL + +P + + + ++ +L+ G YL ++T+ + Sbjct: 64 AYATAVIATQFGLGPLVTLPAALLTTAVAAFLIAAITLRLSGHYLPLSTIAWGISLFYLF 123 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + G GI L G + ++ G+ L+ Sbjct: 124 GNIEML-GGHTGIDHIPPLSLFGHELTGGRELG--------------VIIWGLVALAVWA 168 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L +A A R ++D + + K AF +++ G++G +A ++ Sbjct: 169 VSNLLDSAQGRALRAVKDAPLMAETFGVDTVKEKRIAFVLAALLAGLSGWLYAYLLRFVN 228 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F S I + +V++GG + A++ E + F+ Sbjct: 229 PSPFSLSIGIEYLFMVVVGGAGYVWGAIIGAALITLAREWLQDFLPVLLGTSGNFET--- 285 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343 ++ L + +L R+ + R Sbjct: 286 -----VVFGGLIIFLLHRAEGGVAER 306 >gi|254564216|ref|YP_003071311.1| ABC transporter ATP-binding protein [Methylobacterium extorquens DM4] gi|254271494|emb|CAX27509.1| putative ABC transporter, putative membrane protein precursor with two ATP-binding domains [Methylobacterium extorquens DM4] Length = 823 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 72/330 (21%), Positives = 136/330 (41%), Gaps = 31/330 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + L L + Y + + + V+ GL++++G GL+SL Sbjct: 6 RAPAAMPLAILALTLAGLGLVAATSGYSHFVIALVALTVVAGTGLNVLLGLAGLISLGHA 65 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 YA+GAY+ IL + WL +P +A +S G + +P+++ RG YLA+ T+ Sbjct: 66 GFYALGAYASAILTLKGVS-FWLALPAAAALSALVGAALAVPAMRVRGPYLAMVTIAFGF 124 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + ++ LI+ +T G+ G+ VA G + + ++ + Sbjct: 125 LVEHALIEGGELTGGQNGLVVATGPSLFGLPLGERD---------------LAWLAVISA 169 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 LS LR + A R +RD A SL + K +AFA+S+A G+AGA Sbjct: 170 GLSLYGFHRLRHARLGQALRAVRDADVAAASLGFDPVRVKTAAFAISAALTGLAGAVLPP 229 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 I+P F F+++I+ + V++GG ++ + + + E G+ Y Sbjct: 230 LMLFIAPSSFPFTQSILFVLAVVVGGAGTVLGPLFGALVTVLLPEALAGLAEY------- 282 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +V+ + ++ Sbjct: 283 --------RLLFFGLTTLVVLWLVPAGIVG 304 >gi|28572362|ref|NP_789142.1| ABC transporter branched chain amino acid transport permease [Tropheryma whipplei TW08/27] gi|28410493|emb|CAD66879.1| putative ABC transporter branched chain amino acid transport permease [Tropheryma whipplei TW08/27] Length = 364 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 74/342 (21%), Positives = 136/342 (39%), Gaps = 29/342 (8%) Query: 7 RLNKYDKILCLLAVVYPL-LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 R ++ +L + +VY L ++ + T+ + IY + A GL++VVG GL Sbjct: 17 RPQQWFFLLPFVVLVYLLPIINPPVITTEPGNNFPISLFTMAIYALAAVGLNVVVGYAGL 76 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSI----WLLIPVSAMISGACGMIMGLPSLKFRGDY 121 L L + +A+GAY + S + IPV+ + G +G+P+L+ RGDY Sbjct: 77 LDLGYIAFFAVGAYVSAVFTSPDSPYVKIPYLWTIPVAIFTAMVFGAALGVPTLRLRGDY 136 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI + + + L F P + Sbjct: 137 LAIVTLGFGEIVRIMATVIPALRG---------NLGFSNVGHPPGDYPSGQPIFTPDNGV 187 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 Y+V + + I+ L R+ + W I ++ A + K+ AFA+ +A Sbjct: 188 AWYWVAITVVIFVLVIVGNLERSIVGRNWFAICQDEDAAEVMGVNTFSFKVWAFAIGAAI 247 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G++G+ AA ++ F + +++ + V+LGG + A A++ + + Sbjct: 248 GGLSGSLQAAQTGFVNNQRFDVATSVLFLVAVVLGGSGNKFGAAIGGALVAYIPLRFTEI 307 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 Y + + L L++L R L ++ Sbjct: 308 AQY---------------KYLIFGVCLILLMLFRHEGLFPMK 334 >gi|302556054|ref|ZP_07308396.1| urea ABC transporter, permease UrtC [Streptomyces viridochromogenes DSM 40736] gi|302473672|gb|EFL36765.1| urea ABC transporter, permease UrtC [Streptomyces viridochromogenes DSM 40736] Length = 367 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 134/311 (43%), Gaps = 28/311 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + +L+Y + GL+++VG G +SL +A GAY+ ++ RY + Sbjct: 33 PFYFAPFQVFQLTMVLLYAVALAGLNLLVGFGGQISLGHGAFFAAGAYTAAVMLDRYDSA 92 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 +PV+A G+ G+P+L+ RG YLA+ TL + +L + +P+T G G Sbjct: 93 HLATLPVAAAGCFLLGLGFGVPALRLRGLYLALVTLSFAVFLPPLLKRLEPVTGGSMG-- 150 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 ++ + S + + +MY V+L + ++ + L R+ + A Sbjct: 151 ------------LTVDKLQPPAWSGLAEDQWMYLVVLAVTAVALLLARNLLRSRVGRALL 198 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RD++ A + + K AFA S+ F G+AG + +SPD F F +I +++ Sbjct: 199 ALRDDESAAEVMGVRLSLHKTLAFAWSAMFAGVAGCLYTWVIGFVSPDSFSFVLSITLLA 258 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +++GG+ SL A ++ V + ++ + + + V Sbjct: 259 GLVVGGLASLYGPLLGAAFVMYVPSVAQDVSDAAPG--------------VVFGLLIIAV 304 Query: 332 ILMRSHSLLRL 342 + + L L Sbjct: 305 MFVAPTGLAGL 315 >gi|146339550|ref|YP_001204598.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146192356|emb|CAL76361.1| putative ABC transporter permiase component [Bradyrhizobium sp. ORS278] Length = 334 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 65/314 (20%), Positives = 125/314 (39%), Gaps = 24/314 (7%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + Y+ ++ + L+Y + +I+ G G +SL + + +GAY+ IL +++G Sbjct: 26 VPFFVKDVYVQNIMVLTLMYAALSQSWNILSGYCGQISLGHALYFGLGAYTTAILFTKFG 85 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + W + +IS M +G P + G Y IAT++++EI + W Sbjct: 86 VLPWFGMLAGGLISAVIAMALGYPCFRLGGHYFVIATIVIAEITLLLFQNWDFAGAALGI 145 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 R +L ++ +Y L + ++ + WL + Sbjct: 146 DIPVRRDSWLTFQFTR-------------SKLPYFYFALVLACVAWFVTWWLEDSKWGYW 192 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENII 268 WR ++DN A SL + +K+ A AVS+ + + G+F+A I P+ F +++ Sbjct: 193 WRAVKDNPLAAESLGVDVFNSKMGAAAVSAFLVAIGGSFYAQFVSYIDPESVMGFQFSLL 252 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 + +LGG+ +L ILI + EL + + + Sbjct: 253 MALPAVLGGIGTLWGPMLGAVILIPLTELTRSYIGGSGRGV----------DLIVYGGLI 302 Query: 329 FLVILMRSHSLLRL 342 + L R L+ L Sbjct: 303 IAISLARPQGLVSL 316 >gi|54023841|ref|YP_118083.1| putative branched-chain amino acid transporter component [Nocardia farcinica IFM 10152] gi|54015349|dbj|BAD56719.1| putative branched-chain amino acid transporter component [Nocardia farcinica IFM 10152] Length = 466 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 22/318 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R ++ + + + L LF + + ++ + A GL++VVG GLL Sbjct: 25 RPAQWAVGVPAIIALALLPLFPPPVLDTPAYNFGLVMAEFAMFALIAIGLNVVVGQAGLL 84 Query: 67 SLNCVIAYAIGAYSYVILGSR-------------YGLSIWLLIPVSAMISGACGMIMGLP 113 L V YAIGAY+ +L S + +P++ ++ G+I+G P Sbjct: 85 DLGYVGFYAIGAYTVGLLTSPNSPWNQTDGGWLDPQWAWLACLPIAVAVTALSGLILGSP 144 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 +L+ RGDYLAI TL EI + + +TNG G+ + + + F Sbjct: 145 TLRLRGDYLAIVTLGFGEIVRLLADNLHELTNGSLGLSEVAYPHVGESESKPNGVFSAGN 204 Query: 174 SSF---------VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + Y + Y++ L + + I+ L R+ + AW IR+++ A + Sbjct: 205 TGDPASANLLDRASYGTYWYWLGLALVIVVLLIVGNLERSRVGRAWVAIREDEDAAEIMG 264 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 KL AF + +A G++GA +A I+P F +++ + V++GG + + Sbjct: 265 VPTFKFKLWAFLIGAAVGGLSGAMYAGQVQFINPTGFNIINSMLFLCAVVIGGQGNKLGV 324 Query: 285 AKATAILIGVVELCCGMN 302 I+ + + +N Sbjct: 325 IFGAFIIAYLPKRLTSVN 342 >gi|222824112|ref|YP_002575686.1| branched-chain amino-acid ABC transporter permease [Campylobacter lari RM2100] gi|222539334|gb|ACM64435.1| branched-chain amino-acid ABC transporter, permease protein [Campylobacter lari RM2100] Length = 343 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 72/352 (20%), Positives = 130/352 (36%), Gaps = 46/352 (13%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L+ L FLF+ Y + I I+V+ A +++ G G SL AIG Sbjct: 9 LSFFIIALAFLFISPYFFNDYKIGILSNIAIFVILAVSYNLINGVTGQFSLEPNGFVAIG 68 Query: 78 AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 AY + + + S + + + + + +I+ + Sbjct: 69 AYVAALVLLTSESKIDQFSLEDPSSFILMIHSPSFIVALLAAGLCAMLLSLILAFAVFRV 128 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL I + + I + +TNG G+ + Sbjct: 129 RGDYLAIVTLGFGIIIKLMAINFASVTNGSLGLNDIPKHT-------------------- 168 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 Y G+ S IIL + + A + +RD++ A ++ K AF+ Sbjct: 169 -----TLYWSGGIAIFSVIIILNIVSSKFGRAMKAVRDDEDAALAMGINTFNIKTLAFST 223 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+ G+ G A + +SP+ F F ++ I++LGG+ S + ++IG E Sbjct: 224 SAFLEGVGGGLLACALASVSPEQFDFLFTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEY 283 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 ++ N + + I L LV+L ++ + ++ L Sbjct: 284 LRFLDES-MNIFGYETPAMPGLRMVVFSIVLILVMLFARRGIMGDKELTDIL 334 >gi|313496992|gb|ADR58358.1| Inner-membrane translocator [Pseudomonas putida BIRD-1] Length = 339 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 121/337 (35%), Gaps = 30/337 (8%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 L + K L VV L+ L + ++ +ILI+ M A ++++G G Sbjct: 6 PLPVAKGRAPALLSLVVASLVALPLLLPSA------TLATEILIFAMAALACNLLLGYTG 59 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 LLS I + +GAY +L ++ + +A+ +++G +++ G Y + Sbjct: 60 LLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGALLALLVGALAIRRTGIYFVM 119 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL S++ + T G G+ R I + Y Sbjct: 120 LTLAFSQMAYFLAYTLSDWTGGDNGLLDVPRP---------NIEIAGHVLVDLADPRHFY 170 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + + L + L + R+ + IR+N+ ++ K+ F +S A G+ Sbjct: 171 VFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGI 230 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA +A + ++ + I+GG SL ++ + ++ + Sbjct: 231 AGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPR 290 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L+ + L LV++ L Sbjct: 291 W---------------LMLLGVILILVVVFMRGGLWG 312 >gi|154245807|ref|YP_001416765.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154159892|gb|ABS67108.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 356 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 128/329 (38%), Gaps = 20/329 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + ++ +YI S+ IQI + A GL+I+VG G +S+ + + Sbjct: 27 LTMLFCVAGVVLACFAPFFFSRYILSLMIQIGYLGIAALGLNILVGFSGQISVGHAVFFG 86 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 G ++ L + L I ++ + + A G++ GLP+ + +G YLAIATL I Q+ Sbjct: 87 FGGFASAFLADKGVPVP-LAIVLAGLWTTAVGLLFGLPAARVKGLYLAIATLAAQFILQD 145 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ + T G G A F F+ V+ Sbjct: 146 FFVRAEWFTGGTHGAMAAPFTLFGYDLSGDDRYFYVVLFFVVVMY--------------- 190 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 L R+ A +RD+ + + + + AF +SS + G+ GA +A Sbjct: 191 LGAANLMRSRDGRALIAVRDHYLSAEMMGVNLTKYRTMAFGISSFYAGIGGALYAHYVGF 250 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE----LCCGMNFYYFNSLLK 311 +S + +I + ++I+GG+ S+ T ++ + E L ++ + +L Sbjct: 251 MSVEGLDILFSIQFLGMIIIGGLGSIMGSLMGTIFMVLLPEATGWLASALSGSVIDQVLH 310 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L+ + + L ++ L Sbjct: 311 LKDGLTYMREMLIGLTIILFLIFEPDGLA 339 >gi|182434976|ref|YP_001822695.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463492|dbj|BAG18012.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 383 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 133/336 (39%), Gaps = 16/336 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V L L + ++ G+ + + A GL+++ G+ G LS+ A+GAY Sbjct: 33 AVLIGSLLLLVLPFYLDRFWLQAGLFAMAAAIGAIGLNMLTGATGQLSMGHAFFLAVGAY 92 Query: 80 SY-----------VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 Y + GL WL ++ +++GA G I + + RG YL IATL Sbjct: 93 GYSVLAGESGTENGHALTGLGLPTWLAAILAVLLAGAAGGIFSPIAGRLRGAYLGIATLA 152 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + I Q++L +T G G V F T S + P + + L Sbjct: 153 LIFIGQHVLFNAGSLTGGYNGRNVPPLSVFGFTFDDSELVVAAVPFGSSEKLWYAGLLAL 212 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + L A +L R A IRD++ A + + + F +SS + G+AG Sbjct: 213 LLSALFARGVLRGR---PGRAMNAIRDHRIAAGVMGVPVARYRAGVFVLSSMYAGLAGVL 269 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYF 306 A R P+ F ++ ++++++GG+ S++ A + + ++ + Sbjct: 270 LALVFQRTVPEYFGMILSLEYLAMIVIGGLGSVAGAVVGAAFVSLLPQVFTHYSDSLPLV 329 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + L A+ V+L L RL Sbjct: 330 SAPGTGGLAPGEASRYLYGAAVVAVVLFLPGGLARL 365 >gi|163740308|ref|ZP_02147702.1| ABC branched-chain amino acid family transporter, fused ATPase and inner membrane subunit [Phaeobacter gallaeciensis 2.10] gi|161386166|gb|EDQ10541.1| ABC branched-chain amino acid family transporter, fused ATPase and inner membrane subunit [Phaeobacter gallaeciensis 2.10] Length = 602 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 119/321 (37%), Gaps = 43/321 (13%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI----------------- 83 + I ++ G+ + G+ G+LS + AIGAY+ + Sbjct: 36 RVLSVFFISLIAVVGMGVYSGNSGILSFGHLSFMAIGAYASALLTLPAQLKVATLPKLPD 95 Query: 84 LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + L + ++ ++ +++G+ K G I+TL + I I I W+ + Sbjct: 96 WLATTELGLLPATLMAVFLTSVVALLIGMAIGKLEGSAAVISTLGLLIIVHGIAIGWRDV 155 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 T G + R +V ++ + R Sbjct: 156 TRGSQTFFGIPRET-------------------------SLWVAAAGVVVALIVARLYRD 190 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 + R R+N A ++ I +L +F +S+A + ++GA A ISP F F Sbjct: 191 SVSGLRLRAGRENAIAASAVGIRIRRERLVSFVISAALMALSGALIAHFLGAISPKKFYF 250 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 ++ ++++++I+GGMT+++ + V E+ + + L+ F + Sbjct: 251 TDTFLLLAMLIVGGMTTVTGAITGAVAITIVTEILRRFEGGFSLAGLEMPAVFGTTQIGI 310 Query: 324 MVIALFLVILMRSHSLLRLRT 344 + + + + + L L+ Sbjct: 311 -GLIILFAMFRKPNGLAGLKE 330 >gi|86136083|ref|ZP_01054662.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] gi|85826957|gb|EAQ47153.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] Length = 361 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 132/325 (40%), Gaps = 17/325 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V LL F ++ +LI+ + GL ++ G G SL AIG Sbjct: 22 LCVYGALLALAFALPYLIGEFYLGEVTNVLIWAIAGLGLMLLTGQTGQASLGHAAFLAIG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ IL + + P++ +I+G G+++ +P L+ G YLAIAT+ +S + +I+ Sbjct: 82 CYANTILIEQGVP-FIIAFPLAGVITGFVGLLIAIPVLRLHGIYLAIATIALSVLADDII 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + G +G +I F F YY++L + + Sbjct: 141 VLTEHWSGGVSGK------------FPEMITIFGFEIERWSMPSRFYYLVLVVTIICTLF 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R+ + A+ +RD++ + ++ I K AF +S G AGA + Sbjct: 189 YRNLLRSPLGRAFAAVRDSEVSATAMGVHIARTKGKAFGLSCMITGWAGALMGYYAGTFN 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + F +I ++ ++++GG+ S+ ++ + + + +++ + Sbjct: 249 NETFSLVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQALSILKD----NVVGSGVAIP 304 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 T + + L + IL + Sbjct: 305 GLETGVFGLILIMFILFEPMGIYGR 329 >gi|56696589|ref|YP_166948.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56678326|gb|AAV94992.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 651 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 109/336 (32%), Gaps = 26/336 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + A+ + L +G ++ IY + A GL+I G +G++++ Sbjct: 337 VTAAALAALKSIELKVGVNQALDLTLDALSLASIYFLAAIGLAITFGVMGVINMAHGEFI 396 Query: 75 AIGAYSYVILGS---RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +GAY+ ++ + +SI + IP++ ++ A G+ M +++ + TL+ + Sbjct: 397 MMGAYTGYVVQQLIPDHTISILVAIPLAFAVTFAAGVAMERLVIRW-LYARPLETLLATF 455 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 L + G + + + V + Sbjct: 456 GISIALQQLAKNIFGTQARPLTSP---------EWLDGALVLNDVVSISYIRIAIFFLAL 506 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 A + ++RT + R + N + S+ + F + S G+AG Sbjct: 507 MFLAVFLYIMKRTRLGLETRAVTQNPRMAASMGINPGRVNMLTFGLGSGIAGIAGVAIGL 566 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 S + V++GG+ ++ ++ + + MN + Sbjct: 567 FAKVTSELGSDYIVQS--FMTVVVGGVGNIWGTLAGATMIGFLQKGIEWMNPSNTLAAQT 624 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + F + R ++ L+ + Sbjct: 625 YMIVFIIIFIQF-----------RPRGIIALKGRAA 649 >gi|57234269|ref|YP_181669.1| high-affinity branched-chain amino acid ABC transporter, permease protein, putative [Dehalococcoides ethenogenes 195] gi|57224717|gb|AAW39774.1| high-affinity branched-chain amino acid ABC transporter, permease protein, putative [Dehalococcoides ethenogenes 195] Length = 350 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 142/323 (43%), Gaps = 16/323 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ L+ LF Y + I I V+ A GL+I++G G LS+ A+GA Sbjct: 26 AMLIGFLILLFSLPFNISSYWLGIMNLIGITVVAAAGLNILMGYCGQLSVGHAGFIAVGA 85 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL S+ G+ + S +++G G++ GLPSL+ +G YLAI+T+ I ++ Sbjct: 86 YTTAILASKLGVPFPFDMIASGIMAGLVGVLFGLPSLRVKGFYLAISTIAAQFIIIWVIN 145 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI + + + Y++++ + L+ + Sbjct: 146 HWSSLTGGFNGIVIPP---------------INLFNFDFTTQGSQYFIIMLVAVLAIFFM 190 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + RT I A+ IRDN A + + KL AF + G+AG+ A ++ Sbjct: 191 KNIARTRIGRAFVAIRDNDLAAEVMGINVFKYKLLAFFIGCFLAGVAGSLMAHWIGYLTA 250 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F S++I+ + IVI+GG+ + + + + ++ ++ + F Sbjct: 251 ENFTLSDSILYVGIVIIGGLGTGVGPIFGALFIRLLQQGVQYVSPLMGSAFPQLPSGFAA 310 Query: 319 -RHTTLMVIALFLVILMRSHSLL 340 + +A+ L +++ L Sbjct: 311 GLGPMVFGLAIVLFLVLEPRGLA 333 >gi|254460489|ref|ZP_05073905.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2083] gi|206677078|gb|EDZ41565.1| inner-membrane translocator [Rhodobacteraceae bacterium HTCC2083] gi|297184436|gb|ADI20551.1| hypothetical protein [uncultured alpha proteobacterium EB080_L84F03] Length = 358 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 133/344 (38%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y + L + F + + + ++ + LIY + A GL+I+ G Sbjct: 20 FPIKFDRYRYYVVLA------VAFGIIPFLINDYWANAFLLPFLIYSIAAIGLNILTGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + ++I+ + + ++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPDVNIFFHVIAAGGVTAIVCTAFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + K N F + Sbjct: 134 AVATLAAQFFLVWLFNKVSWFYNYS---------ASGQINAPERTVFGVPVTGANTEAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L +SA I L R W IRD A + + AKLSAFAVS FI Sbjct: 185 TYLFCLVFLAISAIIARNLTRGMQGRKWMAIRDMDIAAEIIGVNPMRAKLSAFAVSGFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A ++F ++ +V+ ++I+GG+ S+ A L+ + Sbjct: 245 GISGALFFAVYLGAVEVGEVFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVALKL 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + ++ + + ++ H + +L Sbjct: 305 VGVDLLGWPTDI---VAHIQLIIVGALIIIFLIAEPHGIAQLWR 345 >gi|311105598|ref|YP_003978451.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310760287|gb|ADP15736.1| inner-membrane translocator 25 [Achromobacter xylosoxidans A8] Length = 326 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 123/318 (38%), Gaps = 36/318 (11%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 S Y + I + + M A G +++ G G SL +G Y+ +L + + + Sbjct: 34 GVSSPYWLGVLIVSMYFAMLACGWNLLAGYAGQFSLAPAAFAMLGGYTTGLLAYHWKVPL 93 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 WL +P+SA++ G G+++G L+ G YLA+ TL +EI + ++ T G G++V Sbjct: 94 WLGLPLSAVVPGLVGLVLGRIVLRLSGPYLALTTLSFAEIVRLVIYNSIDFTRGDQGLHV 153 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 + + + YY+ L +I L R + Sbjct: 154 P---------------------ALLESRVGNYYLFLAALAAVTLLIFLLLRARPGRFLQA 192 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IRD++ S ++ K AF VS A G AG + +SP++ ++ +VI++ Sbjct: 193 IRDDEIGAASRGIDVVRYKTLAFLVSCAICGFAGGLYGTFAQLVSPELGIVTQTGMVIAM 252 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V++GGM +L ++ EL + + + + + Sbjct: 253 VVIGGMGTLVGPLLGAVLVYVASELLRDV---------------GNIQMIVFALLVIIFA 297 Query: 333 LMRSHSLLRLRTPSNFLE 350 L L + Sbjct: 298 RFFREGLWGLARRAFLRR 315 >gi|28493526|ref|NP_787687.1| branched-chain amino acid ABC transporter permease protein [Tropheryma whipplei str. Twist] gi|28476568|gb|AAO44656.1| branched-chain amino acid ABC transporter permease protein [Tropheryma whipplei str. Twist] Length = 364 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 74/342 (21%), Positives = 136/342 (39%), Gaps = 29/342 (8%) Query: 7 RLNKYDKILCLLAVVYPL-LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 R ++ +L + +VY L ++ + T+ + IY + A GL++VVG GL Sbjct: 17 RPQQWFFLLPFVVLVYLLPIINPPVITTEPGNNFPISLFTMAIYALAAVGLNVVVGYAGL 76 Query: 66 LSLNCVIAYAIGAYSYVILGS----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 L L + +A+GAY + S + IPV+ + G +G+P+L+ RGDY Sbjct: 77 LDLGYIAFFAVGAYVSAVFTSPDSPYVKIPYLWTIPVAIFTAMVFGAALGVPTLRLRGDY 136 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI + + + L F P + Sbjct: 137 LAIVTLGFGEIVRIMATIIPALRG---------NLGFSNVGHPPGDYPSGQPIFTPDNGV 187 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 Y+V + + I+ L R+ + W I ++ A + K+ AFA+ +A Sbjct: 188 AWYWVAITVVIFVLVIVGNLERSIVGRNWFAICQDEDAAEVMGVNTFSFKVWAFAIGAAI 247 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G++G+ AA ++ F + +++ + V+LGG + A A++ + + Sbjct: 248 GGLSGSLQAAQTGFVNNQRFDVATSVLFLVAVVLGGSGNKFGAAIGGALVAYIPLRFTEI 307 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 Y + + L L++L R L ++ Sbjct: 308 AQY---------------KYLIFGVCLILLMLFRHEGLFPMK 334 >gi|86139738|ref|ZP_01058305.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] gi|85823629|gb|EAQ43837.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] Length = 359 Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 19/307 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + IY + GL ++ G G +S AIGAY++ IL +RY + L Sbjct: 40 DGYFLDELSFVFIYAIAGLGLMVLTGFSGQVSFGQAAFVAIGAYTHTILLTRYSVPWLLS 99 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P++A+++G G+ +G K G YLAIATL ++ + + ++ T G G+ V + Sbjct: 100 LPIAALVAGLVGLAVGRICGKMHGLYLAIATLSIAIVTERLIGGAGDFTGGHRGLSVPEI 159 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 S +Y + + I+ L RT A IRD Sbjct: 160 NILGLAIDESWK---------------VYLLNFVIFVGCILIVRNLTRTRSGRAMIAIRD 204 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ + +L T + F K AF +S+ F G+AG A + I+P+ F E+I ++ ++++ Sbjct: 205 SEVSARALGTNVAFFKAYAFFISAVFAGLAGGLLAHAFFYITPETFGMGESIRLLLMIVV 264 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ ++ + + + +++ + + + L IL Sbjct: 265 GGIGTIHGAVFGAFFIVLLPTVLSWVKIVLPSAV----ATSGGFDSLAFGLILLGFILFE 320 Query: 336 SHSLLRL 342 L Sbjct: 321 PDGLYGR 327 >gi|320007524|gb|ADW02374.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331] Length = 376 Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 76/355 (21%), Positives = 139/355 (39%), Gaps = 21/355 (5%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F+ RL + L L V LL ++ G+ + + A GL+++ GS Sbjct: 25 FTGRLRRPAPYLWLAGSVLLLLF-----PFYLDRFWLQAGLFAMAAAIGAIGLNLLTGST 79 Query: 64 GLLSLNCVIAYAIGAYSY-----------VILGSRYGLSIWLLIPVSAMISGACGMIMGL 112 G LS+ A+GAY Y + GL WL ++ +++GA G + Sbjct: 80 GQLSMGHAFFLAVGAYGYCVLAGESSTENGHALTGLGLPSWLAAVLAVLLAGAAGGLFSP 139 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 + + G YL IATL + I Q++L +T G G V F T + + Sbjct: 140 IAGRLSGAYLGIATLALIFIGQHVLFNAGSLTGGFNGRPVPPLSLFGFTFDDAEVVVAAV 199 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 P ++Y+ L + R A IRD++ A + + + Sbjct: 200 PFQSSEK---LWYLGLAALLAGGLFARGVLRGRPGRALNAIRDHRIAAGVMGVPVARYRA 256 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 F +SS + G+AG A R P+ F ++ ++++++GG+ S++ A + Sbjct: 257 GVFVLSSMYAGLAGVLLALVFQRTVPEYFGMILSLEYLAMIVIGGLGSVAGAVIGAAFVS 316 Query: 293 GVVELCCGMNF--YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + ++ + ++ + L A+ V+L + RL+TP Sbjct: 317 LLPQVLTHYSDSLPLVSAPGTGGIAPGEASRYLYGAAVVAVVLFLPGGIARLKTP 371 >gi|83950523|ref|ZP_00959256.1| Putative ABC transport system, permease protein [Roseovarius nubinhibens ISM] gi|83838422|gb|EAP77718.1| Putative ABC transport system, permease protein [Roseovarius nubinhibens ISM] Length = 300 Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 66/307 (21%), Positives = 133/307 (43%), Gaps = 16/307 (5%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ SMG + +++ A L++ G G+++ YA+GAY +L ++ G+ + L Sbjct: 2 SAYLISMGTYVGFFMILALALNLQWGIAGMVNFGIAGFYAMGAYVSGLLVAKLGVPVGLA 61 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 IP + + G + L S++ R D+LAI TL + E+ + I++ IT G G+ + R Sbjct: 62 IPAACVAGWVLGGAVALLSVRLREDFLAIVTLGVGEVIRLIVLNEDQITEGPRGLRIDGR 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +Y +F ++ ++ + +RR + R IR+ Sbjct: 122 PF-------------GDLIGPELYPLFYLLLVAVCVLITYLVCERIRRAPMGRTLRAIRE 168 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + L ++ ++ FA+ F+G+AGA +A ISP++F + + VI+ Sbjct: 169 DDVVAEVLGKNVLMHRVLTFAIGGFFMGLAGALYAHYVQNISPEVFMPVVAMFIWMSVIV 228 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG + I ++ +E + + + + + L+ L + + +R Sbjct: 229 GGAGNNRGILIGAGTVMIFLEGTRFIGDF---TDVLDAEKMSAMRIILIGFLLIVTLRLR 285 Query: 336 SHSLLRL 342 LL Sbjct: 286 PRGLLPE 292 >gi|163789414|ref|ZP_02183853.1| hydrophobic amino acid uptake (HAAT) family ABC transporter, permease protein LivM [Carnobacterium sp. AT7] gi|159875268|gb|EDP69333.1| hydrophobic amino acid uptake (HAAT) family ABC transporter, permease protein LivM [Carnobacterium sp. AT7] Length = 324 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 73/342 (21%), Positives = 143/342 (41%), Gaps = 42/342 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 NK + + +L+ + + + + ILI V+ A GL++++G G S Sbjct: 4 FNKKNFGWLIFIAAIYILIQVGTATGIINAFYEITLMTILINVILATGLNLIIGFSGQFS 63 Query: 68 LNCVIAYAIGAYSYVILGSRYG--LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L AIGAY ++ +Y L + + + I+ +++G+P+L+ +GDYLAIA Sbjct: 64 LGHAGFMAIGAYCTGVISIKYPTVLGLMGGLLLGIAIASLVALLVGIPTLRLKGDYLAIA 123 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++EI + +++ ITNG AG+ + Sbjct: 124 TLGVAEIIRIVILNMNDITNGAAGLSGIPFIANWQ------------------------- 158 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + +S +I+ +++ A +IR+++ A S+ K+ AF + +A +A Sbjct: 159 ITFAFIVISLIVIMNYIKSSPGRATISIREDEIAAESMGINTTKYKIIAFVLGAASAAIA 218 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G A+ I P F F +++ ++ IV+ GG+ S++ A +L + Sbjct: 219 GGLHASYFSVIRPADFTFMKSVDILIIVVFGGLGSMTGSVVAAIVLGILNVYLQ------ 272 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F + +AL +++ R LL + + Sbjct: 273 ---------PFGQLRMIIYSVALVAIMVFRPSGLLGTKEFTI 305 >gi|307316762|ref|ZP_07596204.1| urea ABC transporter, permease protein UrtB [Sinorhizobium meliloti AK83] gi|306897384|gb|EFN28128.1| urea ABC transporter, permease protein UrtB [Sinorhizobium meliloti AK83] Length = 537 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 94/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S L S I+ ++ Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLAIALPLAFLVT 317 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + S Sbjct: 318 GAVGLALER--GVIRFLYGRPLETLLATWGISLILQQTVRTIFGPTNREVGNPSW-MSGA 374 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + A+++ L++T + R + N++ S+ + Sbjct: 375 FELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSMGIRTPWVD 434 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S G+AG A S+ I +V+ GG+ +L L Sbjct: 435 ALTFALGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFSL 492 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L+++ + L I R L L+ + Sbjct: 493 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 536 >gi|332286346|ref|YP_004418257.1| inner-membrane translocator [Pusillimonas sp. T7-7] gi|330430299|gb|AEC21633.1| inner-membrane translocator [Pusillimonas sp. T7-7] Length = 323 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 121/320 (37%), Gaps = 36/320 (11%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 A Y + I + + + A G +++ G G SL +G YS + Sbjct: 32 PAFVQSNYWLGVLIVSMYFAIIASGWNLLAGYAGQFSLAPAAFAMLGGYSTALFAYHLQA 91 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 +W+ +P++A+I G G+++G L+ G YLA+ TL +EI + ++ T G G+ Sbjct: 92 PLWIGLPMAAIIPGLVGLVLGRIVLRLSGAYLALTTLSFAEILRLVIYNSIEFTRGDQGL 151 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V S + + YY+ L L +I WL R + Sbjct: 152 TVP---------------------SLLDDRVAYYYLFLVALALVVGLIYWLLRRPMGRFL 190 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 + IRD++ S ++ K AF +S A G AG + +SP++ ++ +VI Sbjct: 191 QAIRDDEIGAASRGVDVLRYKTLAFLISCAICGFAGGLYGTFARLVSPELGLIAQTGLVI 250 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++V++GGM +L ++ E+ + + + + Sbjct: 251 AMVVIGGMGTLVGPLIGALLVYTASEVLRDV---------------GNIQMIVFAFLVIV 295 Query: 331 VILMRSHSLLRLRTPSNFLE 350 L L S Sbjct: 296 FARYFREGLWGLLRRSMLRR 315 >gi|312864526|ref|ZP_07724757.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus downei F0415] gi|311099653|gb|EFQ57866.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus downei F0415] Length = 317 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 134/340 (39%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + V +L + Y + + I I ++ G ++V+G G +L Sbjct: 6 KLNLTWLAIVAVIYAILQVLASTGLLNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ Y + + + A+I+ +I G+P+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYASAIVTQYYPTYDGFYWSMLLGALIAALVAIIFGVPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M+EI + I++ +TNG AG+ + Sbjct: 126 GMAEIIRIIIVNGGTLTNGAAGLTGILPYTTWQV-------------------------I 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++L R++ +R+++ A S+ + K+ F + + +AG+ Sbjct: 161 FVFVVVITILVLNFLRSSTGRQIIAVREDEIAAESMGVNLTRQKVLVFVMGAVISAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + + P F ++I + I ++GG+ S++ A +L + + Sbjct: 221 LYVSYIGTVVPKDFTIMKSIDYLIIAVMGGLGSITGTIIAGVVLGILNMFLQNFSE---- 276 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL + + Sbjct: 277 -----------LRMIIYSLALILVMIFRPGGLLGTKEFTL 305 >gi|190893141|ref|YP_001979683.1| urea or short-chain amide ABC transporter permease [Rhizobium etli CIAT 652] gi|190698420|gb|ACE92505.1| probable urea or short-chain amide ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 541 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 94/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY+ ++ + L S + + Sbjct: 262 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYMVQETIASAFPSLADYSLAFAVPAAFLFT 321 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 ++ + + +L W + I S Sbjct: 322 GLVGLVIER--SVIRYLYGRPLETLLATWGVSLILQQAIRSYFGPTNREVRNPSW-MSGA 378 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F ++ ++++ + ++++ L+R+A R + N++ S+ + Sbjct: 379 FDFGGLVITWNRLWIIVFSLVVFLALLMLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 438 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S GMAG A S+ + I +V+ GG+ +L L Sbjct: 439 AFTFALGSGIAGMAGV--ALSQIDNVSPNLGQNYIIDSFMVVVFGGVGNLWGTLVGALSL 496 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L+++ + L I R L L+ + Sbjct: 497 GVANKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 540 >gi|85704376|ref|ZP_01035478.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] gi|85670784|gb|EAQ25643.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] Length = 358 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 83/344 (24%), Positives = 146/344 (42%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y + L++ F + + +++++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYVVLVS------AFAVVPFVVNDYWVNAVFLPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAYS ++ S +SI + I ++ +I+ A G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYSVYKLMTSFPDVSILIHIILAGVITAAVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N A ++ + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAPERSFLGVPVT---------GAETAPWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L SA I L R W IRD A + + AKL+AFAVSS F+ Sbjct: 185 AYLFCLVFVVASAIIARNLTRGMAGRKWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F +++ +V+ +VI+GG+ S+ A L+ + L Sbjct: 245 GISGALFFAVYLGAVEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVLLKN 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L ++ + + ++ H L +L Sbjct: 305 ---TLVGGLGWPTDLAAHLEFIIVGALIIIFLIAEPHGLAQLWR 345 >gi|220921109|ref|YP_002496410.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219945715|gb|ACL56107.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 343 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 65/347 (18%), Positives = 136/347 (39%), Gaps = 24/347 (6%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + + + L+ + L Y+ ++ I ++Y + +I+ G G Sbjct: 14 PVPTHSAKRRRTLVVGLLVFAAMAALPYGVRDVYLQNVLILTVMYAALSQSWNILGGYCG 73 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +SL + + +GAY +L YG+ W + + S +++G P + G Y +I Sbjct: 74 QISLGHALYFGLGAYFTTVLFVNYGVLPWGGMLAGGLASALVALLLGYPCFRLAGHYFSI 133 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 AT++++EI ++ W + + + + + F ++ + Sbjct: 134 ATIVIAEIGLLLVHNWDFVGGAMGIQWPFNPDSW-------------WTLQFARDKVPYF 180 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + LG+ + + + WR ++D+ +A SL + +K++A AVS+ F + Sbjct: 181 HFALGLFVAVWFVTYLIEESRWGYWWRAVKDDAQAAESLGVEVFRSKMAAAAVSAFFTAI 240 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISI-VILGGMTSLSKIAKATAILIGVVELCCGMNF 303 G F+AA I P+ ++ ++ +LGG+ +L AILI + E+ Sbjct: 241 GGGFYAAYVSYIDPESVMSFRFSLLFALPAVLGGIGTLWGALVGAAILIPLTEISRSY-- 298 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 S + L + + V L R +L L + Sbjct: 299 --------LGGSGSGLDLILYGLLVMGVALARPEGVLSLFRRTRTAR 337 >gi|134300080|ref|YP_001113576.1| inner-membrane translocator [Desulfotomaculum reducens MI-1] gi|134052780|gb|ABO50751.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Desulfotomaculum reducens MI-1] Length = 326 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 77/347 (22%), Positives = 140/347 (40%), Gaps = 42/347 (12%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M +F L K I L ++ ++L + + + I I I ++ A L+++ Sbjct: 1 MLMFKRNLGKQIVIFMALLAIWG-SVYLLIQTGIINPFYELNLILIGINIILAVSLNLIN 59 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G S+ AIGAY I+ + GL + + A+++G G+++GLP+L+ RGD Sbjct: 60 GFNGQFSIGHAGFMAIGAYGAAIITIKAGLPFPVALLFGAVVAGIFGILVGLPTLRLRGD 119 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLAIATL EI + +++ I G G+ ++ Sbjct: 120 YLAIATLGFGEIIRGVIVNIDYI-GGAYGLSGIPKMANWT-------------------- 158 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + + L+ II + A +IR+N+ A ++ K+ AF + S Sbjct: 159 -----WVFWLTVLTVVIITNFINSTHGRATVSIRENEIAAEAMGINTTKYKVMAFTIGSF 213 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G+AG A I P F F ++ ++ +V+LGG S++ A L + Sbjct: 214 FAGLAGGLHAHYFYTIQPGTFNFLKSFDILVMVVLGGQGSITGSIIAAIGLTILSASLQS 273 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + + L ++++ R L+ + S Sbjct: 274 L---------------VSLRLVIYALLLIIIMIFRPQGLMGTKEFSL 305 >gi|304393633|ref|ZP_07375561.1| branched-chain amino acid ABC transporter, permease protein [Ahrensia sp. R2A130] gi|303294640|gb|EFL89012.1| branched-chain amino acid ABC transporter, permease protein [Ahrensia sp. R2A130] Length = 368 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 66/312 (21%), Positives = 135/312 (43%), Gaps = 14/312 (4%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 ++ Y+ + I+ + GL ++ G GL SL AIG Y+ V+L + Sbjct: 39 FFWQNDTYLLGEVTSVFIFAIAGLGLMMLTGQTGLASLGHAAFMAIGCYANVLLLNAGVP 98 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + P++ +I+GA G + +P ++ G YLA+ATL +S + + ++ + T G AGI Sbjct: 99 WL-IAFPLAGLIAGALGTFIAMPVMRLHGVYLALATLALSVLMVDFIVLGEDFTGGVAGI 157 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V D I F F + YYV+LG+C ++ + + R+ ++ Sbjct: 158 SVPD------------ISLFGFTVNRYANPYAFYYVVLGVCLITVAFYRNIVRSPTGRSF 205 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 IRD++ + ++ K AF +S + G+AGA F + ++ + F +I ++ Sbjct: 206 AAIRDSEISARAMGVDPAKTKALAFFLSCSIAGLAGALFGHNATYVTHETFDIVMSITLL 265 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++++GG+ ++ ++ + + + ++ + + L Sbjct: 266 LMIVIGGLGTIHGAFLGAIVVGLIPVIIAN-ARTWLSTSFDITGNIPGIEQAIFAAILIG 324 Query: 331 VILMRSHSLLRL 342 IL L Sbjct: 325 FILFEPMGLYGR 336 >gi|296162849|ref|ZP_06845630.1| inner-membrane translocator [Burkholderia sp. Ch1-1] gi|295886886|gb|EFG66723.1| inner-membrane translocator [Burkholderia sp. Ch1-1] Length = 351 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 118/305 (38%), Gaps = 24/305 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 S+ ++L++ + A G ++++G GLLS I + +G+Y ++ +R L + + + +A Sbjct: 49 SLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYCAGLVLTRTALPVPVALFAAA 108 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 +I A ++G S++ RG Y + TL ++F + +T G G+ R Sbjct: 109 IIGAAAAALVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTPDLTGGDNGLLDIPRPA--- 165 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + F + Y + + + +++ + + IRDN+ Sbjct: 166 ------LGLFGKTIVPLTSPWQYYGFVAVLFLVVFWLLMRVSHSVFGRTLLAIRDNEARA 219 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + KL AF +S A G+AGA A + + +++ + ++GG + Sbjct: 220 AAVGYDVKRFKLMAFVISGAVTGLAGALHALMTGIAPLSNIDYHTSEMILVMTVIGGTGN 279 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L A + + + + L+ I L V L L Sbjct: 280 LFASVLGAAFYVLFADWLSTLWPRW---------------LLLLGIVLIAVSLFMQRGLW 324 Query: 341 RLRTP 345 L Sbjct: 325 GLGER 329 >gi|84686569|ref|ZP_01014462.1| branched-chain amino acid ABC transporter, permease protein [Maritimibacter alkaliphilus HTCC2654] gi|84665482|gb|EAQ11959.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2654] Length = 398 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 71/368 (19%), Positives = 134/368 (36%), Gaps = 28/368 (7%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLS 57 M S R + I+ L +V P+LL F + + + + I+ +FA G + Sbjct: 3 MLGLSQRDTTFLLIVVFLTLVTPILLQPFPEGSGMATFNAGYPDLMQRFAIFGIFAIGFN 62 Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I+ G G LS +G+YS V + G ++ I ++ ++S +++G SL+ Sbjct: 63 ILFGLTGYLSFGHAAFLGVGSYSVVWMYKLLGYNVVPGILLAVIVSALFALLIGYVSLRR 122 Query: 118 RGDYLAIATLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS-- 174 G Y +I TL +++ N+ P+TNG+ G+ V + S F Sbjct: 123 SGIYFSILTLAFAQMSYNLAYSVLTPLTNGETGLQVYTNDPQVLMGENSPTSPHFFGIVM 182 Query: 175 ---------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 + YY + L + L + R+ R I+ NQ Sbjct: 183 NESAKLNVGGWEFTFNNGYYFCAIVAILVFYLSLRIFRSPFGLMLRAIKTNQTRLNYTGL 242 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 L+AF +S + G+AGA A+ + +++ + V+ + ILGG +L Sbjct: 243 NSRPYTLAAFVISGMYAGLAGALMASMDPLAGAERMQWTASGEVVLMTILGGAGTLMGPI 302 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVI 332 + + +N + + + + LV+ Sbjct: 303 LGAGFIKYFENIFSKINDNMLHQWFAWMPDGIEDFLIGLSHFFVGKSWHLTLGLLFMLVV 362 Query: 333 LMRSHSLL 340 + L+ Sbjct: 363 IFLPGGLV 370 >gi|158426210|ref|YP_001527502.1| ABC-type branched-chain amino acid transport system permease component [Azorhizobium caulinodans ORS 571] gi|158333099|dbj|BAF90584.1| ABC-type branched-chain amino acid transport system permease component [Azorhizobium caulinodans ORS 571] Length = 356 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 126/327 (38%), Gaps = 20/327 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ L Y+ S+ IQI + A GL+I+VG G +S+ + Y G Sbjct: 29 MLFCVAGVVALACAPLVLSSYLLSLLIQIGYLGIAALGLNILVGFSGQISIGHAVFYGFG 88 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 ++ L L I ++ + + G++ G+P+ + +G YLAIATL I Q+ Sbjct: 89 GFASAFLAEHGVPVP-LAIILAGLWTTVVGLLFGVPAARVKGLYLAIATLAAQFILQDFF 147 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 ++ T G AG A F+ FV+ + Sbjct: 148 VRATWFTGGSAGAVAAPFTILGFDMSGDHRYFYVVLVFFVVLYLG--------------- 192 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R+ A +RD+ + + + + AF +SS + G+AGA +A +S Sbjct: 193 ASNLMRSRDGRALIAVRDHYLSAEMMGVNLTKYRTMAFGISSFYAGIAGALYAHYIGYMS 252 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK----FD 313 + +I ++++I+GG+ S+ T ++ + EL + S + Sbjct: 253 VEGLDILFSIQFLAMIIIGGLGSVMGSLFGTIFMVLLPELTGALAGALQGSAIDKALHLK 312 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340 L+ + L ++ L Sbjct: 313 DGITYLREMLIGAVIILFLIFEPDGLA 339 >gi|148257364|ref|YP_001241949.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409537|gb|ABQ38043.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 332 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 125/337 (37%), Gaps = 30/337 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L+A+ ++ L + +Y + Q + + A GL++ +G G +SL Sbjct: 7 LLLVALAIIVIAGLIIIPMNFNRYGLYILSQWAVMTIAAMGLNLTLGYAGQVSLAQGAFV 66 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY IL + + + + +I G ++G P+L+ + YLA TL S + Sbjct: 67 GIGAYGAAILTTHGWP-LISALGLVIVICFIVGWLLGYPALRVQHHYLAFVTLAFSTLMF 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + +TNG GI R + YY+ LG L Sbjct: 126 LVFRNESWLTNGIYGISNIPRPEIF--------------GFPTRKPLPFYYLCLGSLGLV 171 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + WL R+ A+ +R+N SL L AFA+ SA G+AG +A Sbjct: 172 TLAMWWLIRSPWGRAFMALRENPIRAQSLGIDTRRYTLMAFAIGSALGGIAGVLYAPLTQ 231 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F ++ ++ +VI+GG + I + + E YY Sbjct: 232 YVDPVPFNLQLSLDLLMMVIVGGSGFMLGPFLGAMIAVLLPEWLRFAEGYY--------- 282 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L A+ +++ +L + R Sbjct: 283 ------LMLYAAAVIALLIYSPSGILGILDRYLSSRR 313 >gi|239814235|ref|YP_002943145.1| ABC transporter [Variovorax paradoxus S110] gi|239800812|gb|ACS17879.1| ABC transporter related [Variovorax paradoxus S110] Length = 631 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 106/311 (34%), Gaps = 10/311 (3%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 ++ S+ I +Y + A GL ++ G G+ S +GAY+ + + + Sbjct: 38 WGFLPEFTVSVLSNIGLYALVAAGLVMLTGVGGMTSFGQAAFVGMGAYATAWICTSPMAA 97 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 WL V + G+++GL L TL + + + Sbjct: 98 AWLGGAVGPALLPWAGLMLGLAFTFALAWALGAVTLKLQGHYLPLCTIA---WGLSLYYL 154 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + + G T + + + + V+ + L+ + L + A R Sbjct: 155 LGNMDFLGGQTGITGVPPLVIAGYSLATPRALGVVIWAVLLLALWAMHNLLDSREGRAIR 214 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 ++ + S+ ++ F +++ ++G +A + ++P F + I ++ Sbjct: 215 ALKGGRLMAESMGVDTARHRVKLFVLAALLAAVSGWLYAHLQRFVNPTPFNLNIGIELLF 274 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 + ++GG L A++ + E + S F + + + V Sbjct: 275 MAVVGGAGHLWGAVLGAALITLLKEKLQDVLPSLLGSSGNF-------EVIVFGLLMLFV 327 Query: 332 ILMRSHSLLRL 342 + + L Sbjct: 328 LQRFADGLWPT 338 >gi|108804852|ref|YP_644789.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941] gi|108766095|gb|ABG04977.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941] Length = 385 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 88/369 (23%), Positives = 157/369 (42%), Gaps = 32/369 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + +++ L+ F+ ++ + I + ++V+ A GL+IVVG GLL L V Sbjct: 3 RRYALPASLIAAALVLPFVDRALGTDFLFT-AIVVAVFVLLALGLNIVVGFAGLLDLGFV 61 Query: 72 IAYAIGAYSYVILGSRY-----------------------GLSIWLLIPVSAMISGACGM 108 YA+GAY L S + +S WL++ ++A + CG+ Sbjct: 62 AFYALGAYVCGWLASTHFRQVSFSLGSTARSLTGEPLPGIHISFWLILIIAAAFTALCGV 121 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 I+G P+L+ RGDYLAI TL EI + + + + Sbjct: 122 IIGAPTLRLRGDYLAIVTLGFGEIIPRFFLNGDNLFGFNLTNGTIGIKAIDAPGIPFVPF 181 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 S + + YY +L + L+ + + L+ + + AW ++R+++ A ++ + Sbjct: 182 ESWQRFSQLDLSPW-YYTILALVLLTVFVNVRLQNSRLGRAWISVREDETAAAAMGINPV 240 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 KL A+A+ + F G+AGAF+ A I P F FS +I+++ +VILGGM ++ + Sbjct: 241 TTKLWAYALGAVFGGIAGAFYGAFIKNIFPTSFSFSISILILCMVILGGMGNIYGVILGA 300 Query: 289 AILIGVVEL-------CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +L + S + L + L LV+L+R L+ Sbjct: 301 IVLQAINRYLLPQLNDLVHALGDALGSEALSQADIPKYNFLLFGLLLVLVMLLRPEGLIP 360 Query: 342 LRTPSNFLE 350 R + L Sbjct: 361 NRQRAEELH 369 >gi|56421513|ref|YP_148831.1| branched-chain amino acid ABC transporter permease [Geobacillus kaustophilus HTA426] gi|261420415|ref|YP_003254097.1| inner-membrane translocator [Geobacillus sp. Y412MC61] gi|319768081|ref|YP_004133582.1| inner-membrane translocator [Geobacillus sp. Y412MC52] gi|56381355|dbj|BAD77263.1| branched-chain amino acid ABC transporter (permease) [Geobacillus kaustophilus HTA426] gi|261376872|gb|ACX79615.1| inner-membrane translocator [Geobacillus sp. Y412MC61] gi|317112947|gb|ADU95439.1| inner-membrane translocator [Geobacillus sp. Y412MC52] Length = 324 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 71/344 (20%), Positives = 140/344 (40%), Gaps = 42/344 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + + +LA + ++ + + + + + I VM A L +++G G Sbjct: 5 KRTRGFWVSVILAFAFFAVVEWLIASGTLNVFYVNTLFFMAINVMLAASLHLIIGITGQF 64 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S+ +A+GAY+ ++ + L + + + + + G+++G+PSL+ +GDYLAIAT Sbjct: 65 SIGHAGFFAVGAYASAVMTMKLQLPFAVGVLTAGIAAMLAGLVIGVPSLRLKGDYLAIAT 124 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + L+ + + + + Sbjct: 125 LGFGEIVRIALLNIDYVGGAS---------------------------GMTVTHMTTWPW 157 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + F++ +I + A +IR+++ A ++ + K++AFA+ S F G+AG Sbjct: 158 VFACLFVTILVIANFTNSTHGRACISIREDEIAADAMGINTTYYKVAAFAIGSFFAGIAG 217 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A +A I P F F ++ ++ V+LGG+ SLS A +L V Sbjct: 218 ALYAHHFYIIQPSNFGFLKSFDILIFVVLGGLGSLSGAVVAAVLLTIVSTFLQNY----- 272 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + I L LV+L R L+ + S+ + Sbjct: 273 ----------PETRMIIYSIVLILVMLYRPTGLMGTKELSSLFK 306 >gi|84501433|ref|ZP_00999638.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] gi|84390724|gb|EAQ03212.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] Length = 358 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 80/351 (22%), Positives = 147/351 (41%), Gaps = 21/351 (5%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F +R ++Y L + FL + + + +++ + LIY + A GL+I+VG Sbjct: 20 FPIRFDRYRYYAVLA------VAFLIVPFVINDYWANAVLLPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + ++I+ I ++ I+ G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYATYKLMTAFPDINIFFHIVMAGGITAIVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYN---------NSASGQINAPERTVFGQAVTGPATEAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L SA + L R A+ W IRD A + + +KL+AFAVSS F+ Sbjct: 185 TYLFCLVFTVASALLARNLTRGAMGRRWMAIRDMDIAAEIIGVNPLISKLTAFAVSSFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA F A +++ +++ +V+ ++I+GG+ S+ A L+ + L Sbjct: 245 GIAGALFFAVYLGAVEVGEVYGINKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVLLKN 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + F ++ + + ++ H L +L + R Sbjct: 305 VLVGTLGWPTGLASHF---EIMILGFLIIVFLVAEPHGLAQLWRVTKEKLR 352 >gi|76818994|ref|YP_336949.1| sugar ABC transporter permease [Burkholderia pseudomallei 1710b] gi|76583467|gb|ABA52941.1| sugar ABC transporter, permease protein [Burkholderia pseudomallei 1710b] Length = 835 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 87/314 (27%), Gaps = 29/314 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + ++ V ++L + + + Q I + A G++ V+ + L+ Sbjct: 537 IPIVFVALCVVLAFASPYFLTWRNWSDILRQTSINGILAIGMTYVI-LTKGIDLSVGSVL 595 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ + G+ + + + GA + ++ +ATL M + + Sbjct: 596 ALAGIVSGLAGAAGH--GLAVSLAAGVACGAALGAINGVAIARLNVPPFVATLGMLSVAR 653 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 G+ + + + + + + Sbjct: 654 --------------GVTYIANDGSPVANLPDDYLSLGIGRLGPLGMPVLIFAGVALACWW 699 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 R T + N+K+ + + S + VS A G+AG AA Sbjct: 700 VL-----RYTTYGRYLYAVGGNEKSARTSGIGVRKVVFSVYVVSGALAGLAGMILAARTT 754 Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308 S + I+ V++GG + ++ + + + Sbjct: 755 SA-LPQAGVSYELDAIAAVVIGGTSLSGGQGGVVGTLFGALLIGVINNGLNLLGVSSYYQ 813 Query: 309 LLKFDCSFNMRHTT 322 + + Sbjct: 814 QIAKGLIIVLAVLI 827 >gi|330470596|ref|YP_004408339.1| inner-membrane translocator [Verrucosispora maris AB-18-032] gi|328813567|gb|AEB47739.1| inner-membrane translocator [Verrucosispora maris AB-18-032] Length = 342 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 119/312 (38%), Gaps = 29/312 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 Y M Q+L + + GL I+ G G +SL +GAY+ ++ + Sbjct: 41 PPLLFDDYWVFMAAQVLAFAVATLGLDILYGRTGQMSLAHASFMGVGAYTTYVMATHGYG 100 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + ++ +++ +P+L+ G LA+ TL E+ + +T G G Sbjct: 101 -PAMQLAAVIGVALVAALVVSVPTLRLSGMRLALVTLAFGELLAWAIRNTTDLTGGTQGA 159 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V F+F + Y + L ++ + + L RT + Sbjct: 160 SVDP---------------FQFGRLDSSEPLHAYLIALVPAAIATAFAVHLGRTQLGRRM 204 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 +RD++ A S+ + K++AF +S+ + G+AG +A I+P F ++ + Sbjct: 205 LAVRDSELAAESVGVAVARTKITAFLISAVYAGVAGWLYAGITGFIAPPDFDLFASVYLF 264 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 V++GG ++ + ++ + E+ + + L + Sbjct: 265 VAVVIGGAGTVLGAWLGASYVVLMPEVFTLAGQ-------------PNLYPIVGGALLAI 311 Query: 331 VILMRSHSLLRL 342 V L+ ++ L Sbjct: 312 VALVVPDGIVGL 323 >gi|328953697|ref|YP_004371031.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] gi|328454021|gb|AEB09850.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] Length = 318 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 73/325 (22%), Positives = 136/325 (41%), Gaps = 29/325 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL+ V LL G Y ++ I + V+ GL++++G G +SL Y + Sbjct: 7 LLSAVCFFLLVALCGGLLQGTYYFTLLNLIGLNVIVVLGLNLLMGYAGQISLGHAAFYGL 66 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G+Y IL + Y + L + +SG +++G+P+LK RG YLA+ATL I + Sbjct: 67 GSYVSGILTATYSVDPLLALLAGLAVSGLVALVVGIPALKLRGYYLAMATLGFGIIISIV 126 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + +T G +G+ G + ++++ Sbjct: 127 FQELSWLTGGPSGLMGIPSFRLAGFNFDT--------------PRTSFFLVWSAAGFILI 172 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L + + + A R I D++ A ++ KL F VS+ + +AG A + + I Sbjct: 173 LSLNIVDSRVGRALRAIHDSETAALAMGIDAQRMKLLIFVVSALYASLAGGLLAHTINFI 232 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P + F +I ++++V++GGM S+ A+L + EL Sbjct: 233 APSSYGFMFSIKLVTMVVVGGMASIWGSLLGAAVLTVLPELLAFF--------------- 277 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + + L +V++ LLR Sbjct: 278 HDLEVVIFGLILMVVMIFMPRGLLR 302 >gi|121610758|ref|YP_998565.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121555398|gb|ABM59547.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 315 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 121/312 (38%), Gaps = 24/312 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 KY + + +++ M A G + + G G +S+ +GAYS L GL Sbjct: 19 PQVLQVKYFIHLAVLAMLWAMVAQGTNFIQGYAGYVSIVQGGFMGVGAYSSAWLSMNTGL 78 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 +WL + + + + +G PSL+ +G Y AI T+ + + L+ +T G++G+ Sbjct: 79 PVWLAFVAAPLCTAVVALCVGYPSLRVKGHYFAIVTMAFNMVIFIFLVNAIGLTGGESGL 138 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + R YY++L S+ + WL R+ W Sbjct: 139 SRIPAPPGFTLLGQEVDFQNRAH---------YYYLVLLALVCSSVLAAWLVRSRAGRIW 189 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 + IR N+ +L KL AF S+ + G AGA +A I+P F ++ I Sbjct: 190 QAIRQNEMYTEALGVATWRYKLLAFVASALYAGSAGALYAHYVGFINPTPFSVDASMNAI 249 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 VILGG +LS +++ + E+ + L L Sbjct: 250 LAVILGGSATLSGPMVGAVLVVALPEMLR---------------IAETFRFIAYGVLLML 294 Query: 331 VILMRSHSLLRL 342 ++ L+ + Sbjct: 295 AVMYFPRGLVPM 306 >gi|327190920|gb|EGE57974.1| putative urea or short-chain amide ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 541 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 95/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY+ ++ + L S + + Sbjct: 262 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYVVQETIASAFPSLADYSLAFAVPAAFLFT 321 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 ++ + + +L W + I S Sbjct: 322 GLVGLVIER--SVIRYLYGRPLETLLATWGVSLILQQAIRSYFGPTNREVRNPSW-MSGA 378 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F ++ ++++ + ++++ L+R+A R + N++ S+ + Sbjct: 379 FDFGGLVITWNRLWIIVFSLVVFLALLMLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 438 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S GMAG A S+ + I +V+ GG+ +L L Sbjct: 439 AFTFALGSGIAGMAGV--ALSQIDNVSPNLGQNYIIDSFMVVVFGGVGNLWGTLVGALSL 496 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 V + L+++ + L I R L L+ + Sbjct: 497 GVVNKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 540 >gi|296158840|ref|ZP_06841669.1| inner-membrane translocator [Burkholderia sp. Ch1-1] gi|295891045|gb|EFG70834.1| inner-membrane translocator [Burkholderia sp. Ch1-1] Length = 325 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 30/320 (9%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 ++ L A S Y + I I+ + A GL+I+ G G SL +AIGAY+ Sbjct: 27 GFVVLYALIALFSGGYFVYLLNLIGIFALVAIGLTILTGFSGQTSLGHAGFFAIGAYASA 86 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 I R+G+ WL IP++ + G ++ LP+L+ + YLAIATL + Q ++ +W+ Sbjct: 87 IFAQRWGVPFWLAIPLAGAFATVIGALIALPALRLKDLYLAIATLGFGIVTQKVIFEWRT 146 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ V F + +V+ L Sbjct: 147 VTGGGGGMQVPMPSLFGLSVADGSRM---------------AWVIAATLAAGTWAAFRLA 191 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + A +R+++ A + + K+ AFA+S+ + +AG +A ++P+ F Sbjct: 192 SSRTGRALSMLRESETAAACIGIRVARYKVVAFALSAFYTAVAGGLYANVVRYVNPESFD 251 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + +I+ ++++++GGM S+ A + V E G Sbjct: 252 VNMSIMFLAMIVIGGMGSVRGALLGAAFYVAVPEAFRGFKDAPG---------------L 296 Query: 323 LMVIALFLVILMRSHSLLRL 342 + I+L LV+++ L L Sbjct: 297 IFGISLMLVVILLPGGLTSL 316 >gi|171741088|ref|ZP_02916895.1| hypothetical protein BIFDEN_00154 [Bifidobacterium dentium ATCC 27678] gi|171276702|gb|EDT44363.1| hypothetical protein BIFDEN_00154 [Bifidobacterium dentium ATCC 27678] Length = 365 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 141/351 (40%), Gaps = 42/351 (11%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L + + + + V LL + Y+ + + I V+ L++ +G LG Sbjct: 8 LSIKQSYLVCAIGVAVLFGLLMAVCETGVASLYVKGIIMTCCIAVIMTTSLNLTIGVLGQ 67 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLK 116 L+L C AIGAYS +L + L+ +++ G+++G+P+L+ Sbjct: 68 LTLGCCGFEAIGAYSAALLSKLLVANGVQMDATLRFLLVTFAGGVVACIFGILVGIPALR 127 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 GDYLAI TL EI + I+ K + L + + Sbjct: 128 LHGDYLAIITLGFGEIIRVIIQNLKVAGG------------------KGLSEGQQGQALI 169 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 I + YV+ + ++ ++ R+ A + IRD++ A + I + K+ FA Sbjct: 170 GIDRLANLYVVFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAAGASGINITYLKVMVFA 229 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S+ F G+AG FA ++P M + ++I + +V+ GGM SL+ A L + E Sbjct: 230 ISAFFAGIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVAAVGLTILPE 289 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L + Y + + L L+++ R + S Sbjct: 290 LLRAFSEY---------------RMLVYSVVLVLIMVFRPQGIFGNWEFSL 325 >gi|152994980|ref|YP_001339815.1| inner-membrane translocator [Marinomonas sp. MWYL1] gi|150835904|gb|ABR69880.1| inner-membrane translocator [Marinomonas sp. MWYL1] Length = 540 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 98/297 (32%), Gaps = 21/297 (7%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 + GL+I G +G++++ +GAY+ ++ I I V+ + +MG Sbjct: 265 ASIGLAITFGVMGVINMAHGEMIMLGAYTTYVVQLIMPNYIDYSIWVAIPAAFLVSGLMG 324 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + + + +L + + + + S + Sbjct: 325 VLIERL------VICRLHGRPLETLLATFGISLILQQLVRTIFSPLNRQVSTPSWMSGSW 378 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + + + Y+L + +++ L++T++ R + N+ ++ + Sbjct: 379 EINPVLSLTLNRLYILAFALLVFIVLVIVLKKTSLGLNVRAVSQNRNMAKAMGVKTNWVD 438 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG + + S I +V+ GG+ +L A L Sbjct: 439 AMTFGLGSGIAGIAGVALSQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLLGTLVAAFTL 496 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + + L+++ + L I R L + + Sbjct: 497 GIATKFLE-------------PTTGAVLAAILVLVFIILFIQKRPKGLFPQKGRAAE 540 >gi|154244385|ref|YP_001415343.1| ABC transporter related [Xanthobacter autotrophicus Py2] gi|154158470|gb|ABS65686.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 863 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 113/324 (34%), Gaps = 30/324 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L + + +++ M L+++VG GL+S + +GA Sbjct: 30 LLVAAASLIALPSVLSALGLTLTSASDVVLLAMACMALNLLVGYTGLVSFGHGAWFGLGA 89 Query: 79 YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ +L +A++ + +G L+ RG Y ++ TL + + ++ Sbjct: 90 YAAALIQHHLLPGWGVVLALPAALVVALAAVPIGFVVLRRRGVYFSLLTLAFTALLFSVA 149 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W +T G+ GI R + Y V+ + F+ Sbjct: 150 FRWTAVTGGENGIGGVRR--------------GALLGFDLETGTAFYAVVAVVMFVVVFK 195 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + R+ + + IR+N++ + K++ F +S+ +AGA + S Sbjct: 196 LQRFVRSPMGSVLVAIRENEQRARFIGYDTRAYKIACFTLSAGVAALAGALMTFNHRFAS 255 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 D + + ++++V++GGM S A + E + Sbjct: 256 ADPIAVAFSGELLAMVVIGGMRSFLGPALGALFFVLFREFLSMWTPNW------------ 303 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + I+ L+ Sbjct: 304 ---LFYFGLLFMAFIVYSPTGLVG 324 >gi|260778378|ref|ZP_05887271.1| urea ABC transporter permease protein UrtB [Vibrio coralliilyticus ATCC BAA-450] gi|260606391|gb|EEX32676.1| urea ABC transporter permease protein UrtB [Vibrio coralliilyticus ATCC BAA-450] Length = 549 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 98/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ GL+I G +G++++ +GAY+ ++ L + +S + Sbjct: 264 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMLGAYTTYVMQQLLPQQTGLALILSIPM 323 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G+ + +L L + +L + + + + Sbjct: 324 AFLVSGLVGIVIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSVFSPLNRSVS 377 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + Y++L + +++ L++T + R + N+ + Sbjct: 378 TPEWMSGALEINPMLSLTFNRLYIILFCAMVFIGLVMVLKKTPLGLQVRAVSQNRSMARA 437 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + S G+AG + + + I +V+ GG+ +L Sbjct: 438 MGIRSERVDAMTFGLGSGVAGIAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 495 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L +L L+++ + L I R L Sbjct: 496 GTLVAGLSLGLFNKLLEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 542 Query: 343 RTPSNF 348 R + Sbjct: 543 RGRAAE 548 >gi|218295395|ref|ZP_03496208.1| ABC transporter related [Thermus aquaticus Y51MC23] gi|218244027|gb|EED10553.1| ABC transporter related [Thermus aquaticus Y51MC23] Length = 582 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 110/304 (36%), Gaps = 21/304 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ I + A L ++ G G+ S +GAY+ +L + G S WL + + Sbjct: 21 YLTLLNFFAIAALVALSLYVLTGLGGMTSFAQAAFMGMGAYATALLTVKGGYSPWLGLLL 80 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ +++G +++ +G +L ++T+ + +T G G+ L Sbjct: 81 GLGLALVLALVLGGLTVRLKGHFLPLSTIAWQVALYILAGNLVGLTGGHTGLTDLPALVL 140 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G + + R+ + + + LR + + A +R + Sbjct: 141 FGLPLDNAFRYAFLSLFLLALLVLA--------------LHNLRESRLGRALLALRGDAL 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A S +L AF +S G+AG +A ++P F +I + + + GG+ Sbjct: 187 AAASFGVDPAALRLKAFLLSGFLAGLAGFLYAHFLRFVNPTPFSLEASIKYLVMAVAGGV 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ + A+ G+ + + T + L ++++ Sbjct: 247 GAIPGVLLGAALFTGLEDWLKDLLPLLLGRQ-------GNYETIAYGLILAAILILAPRG 299 Query: 339 LLRL 342 L L Sbjct: 300 LWPL 303 >gi|326333439|ref|ZP_08199682.1| putative branched-chain amino acid transport system, permease component [Nocardioidaceae bacterium Broad-1] gi|325948744|gb|EGD40841.1| putative branched-chain amino acid transport system, permease component [Nocardioidaceae bacterium Broad-1] Length = 330 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 122/311 (39%), Gaps = 6/311 (1%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++G Q +++ + A GL+I G GLL+ A+GAY + + WL I ++ Sbjct: 14 ALGPQAIVFALAAIGLNIHFGYTGLLNFGQAGFVAVGAYGLAVSVVTFDAPFWLGIVMAL 73 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + +I+G+P+L+ R DYLAI T+ +E+ + + + + Sbjct: 74 VAPLVLAVILGVPTLRLRADYLAIVTIAAAEVLRFVFGAVETKETFGGSNGLNGFARPFQ 133 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 SF +++ V + L ++ L R+ R+IR+++ A Sbjct: 134 EANPYSSGIDLGIISFGRNDLWSLTVGWILVALCCVLVWALMRSPWGRVLRSIREDEDAV 193 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 SL + K+ A A+ G+ G F A + + P + + ++LGG Sbjct: 194 RSLGKNVFAYKMQALALGGVIGGLGGMFLALKQASVVPSDYSTLMTFYAFAALLLGGAAR 253 Query: 281 LSKIAKATAILIGVVELCCGMN------FYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + + + ++ + S + D ++ ++ +A+ L+++ Sbjct: 254 VMGPVVGSVLFWFLIAGLGSFFSQSAGEGGWIPSAIMTDTQASVIRYIVLGLAIMLLMIF 313 Query: 335 RSHSLLRLRTP 345 R + R Sbjct: 314 RPQGIFGDRRE 324 >gi|298246956|ref|ZP_06970761.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963] gi|297549615|gb|EFH83481.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963] Length = 357 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 21/343 (6%) Query: 3 IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62 FS R+ + CLL + L S + I I+V+ A +++ G Sbjct: 24 RFSGRMRGWIASACLLLFLLLLPTLYDGLFGGSANFELHRVSLIGIFVIAALAQNVLTGY 83 Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 SL + +GAY + WL I V+ + S G+I+G P+L+ G +L Sbjct: 84 AAQPSLGNAAFFGVGAYMLAWTTNDLNWPFWLGILVAMLASAVLGVIIGGPALRISGAHL 143 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + I ++L W + L ++ + Sbjct: 144 AVATLGLVLITGSLLDLWDKAAGRQNYDLNTIPL-------------------WLSDDRA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 +Y++++ + L + +L R+ + AW IRD++ A + I KL AF VS+ Sbjct: 185 LYFLIIVVVALLLFLSFYLLRSRVGRAWIAIRDDETAAEAFGVNITRYKLLAFVVSAVLT 244 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AGA +A S M + I ++++++GG+ S+ + + L + Sbjct: 245 GLAGALYATWATTASSSMSSSDQTIAFLAMIVVGGLGSIVGSVLGALFVGFLPLLLGQLP 304 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++ T + + L L ++ H L L Sbjct: 305 NPLVMGSMQI--QVATLTTGIYGLLLLLALIFFPHGLSGLVER 345 >gi|94312442|ref|YP_585652.1| ABC transporter-related protein [Cupriavidus metallidurans CH34] gi|93356294|gb|ABF10383.1| ABC-type transporter, ATPase and permease components [Cupriavidus metallidurans CH34] Length = 617 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 129/324 (39%), Gaps = 22/324 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A + +++ L + ++ ++G I +Y + A GL ++ G G+ S +G Sbjct: 31 IATLAFVIVLALLPVLPTPEFWITLGNYIGLYSIVAIGLVLLTGVGGMTSFGQAAFVGLG 90 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS L +++GLS W+ + V +I+ C ++GL +++ G YL +AT+ + Sbjct: 91 AYSTAYLTTQFGLSPWIGLVVGLIITVLCAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 150 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + G+ L G ++S M+Y++ + L+ Sbjct: 151 GNLDFL-GKYDGLNGIPVLSLFGIELQS--------------GRSMFYLIWAVVLLAVVA 195 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + A R ++ ++ + K+ F V++ ++G +A + ++ Sbjct: 196 MHNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVVAAMLACVSGFLYAHLQRAVN 255 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + I + + ++GG+ + +L + ++ G+ S F Sbjct: 256 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGVLTILKDVLQGLLPKLLGSDGNF----- 310 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + + L L++ + Sbjct: 311 --EIIVFGVLLVLLLQYARDGIWP 332 >gi|94985309|ref|YP_604673.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300] gi|94555590|gb|ABF45504.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Deinococcus geothermalis DSM 11300] Length = 541 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 72/304 (23%), Positives = 132/304 (43%), Gaps = 9/304 (2%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 + + + GL GL+ + + + WL + +S + + G+ Sbjct: 205 FALASLGL-----VAGLILTARALLVLNAFRAQGLATGIDAGFFWLFLALSVLAAAIVGV 259 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 ++GLP L+ +GDYLAI TL + E+ + + + G G + + Sbjct: 260 LIGLPVLRLKGDYLAIITLGLGEVIRVLANNLDLYSAGSQG---ITPIKSAPVPWFDRLA 316 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 +F+Y ++L M L ++ + L R+ I AW IRD++ A ++ ++ Sbjct: 317 GTLGFQPDQYSLLFLYMLVLVMIALILTVNIRLDRSRIGRAWIAIRDDEVAAQAMGVPLV 376 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 KL AFA ++F G G FAA + ISP+ F ++I V+S+VILGGM S + Sbjct: 377 QTKLIAFATGASFAGAMGMIFAAKQTFISPESFNLFQSIGVLSMVILGGMGSFPGVILGA 436 Query: 289 AILIGVVE-LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 A++ + + G+ N + + + + L ++L+R LL R + Sbjct: 437 AVVTLLNLRILPGLGEATANLGIPQQVNPGQLQRLIFGVILVTMMLLRPEGLLPNRRRTL 496 Query: 348 FLER 351 L + Sbjct: 497 ELHQ 500 Score = 49.1 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 36/78 (46%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 V LL + A + + + IQI+I+ A GL+IVVG GLL L Sbjct: 75 WRAAPWAKALVGLGSLLLVLPWAGQEDTSLLDLSIQIMIFAALALGLNIVVGLAGLLDLG 134 Query: 70 CVIAYAIGAYSYVILGSR 87 V +A+GAY + I S Sbjct: 135 YVAFFAVGAYIWGIFASP 152 >gi|222149559|ref|YP_002550516.1| ABC transporter membrane spanning protein (urea/amide) [Agrobacterium vitis S4] gi|221736541|gb|ACM37504.1| ABC transporter membrane spanning protein (urea/amide) [Agrobacterium vitis S4] Length = 542 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 101/319 (31%), Gaps = 18/319 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + + I + ++ A GL+I G +G++++ +GAYS I+ Sbjct: 241 VALWNTAQNITYGISLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYSTFIVQQAIR 300 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + L S I+ + + + + +L W + Sbjct: 301 ANAPELFDWSLAIALPVAFAVTGIFGLVIER--CVIRFLYGRPLETLLATWGISLMLQQL 358 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + S F + ++L+ + ++++ L+R+A Sbjct: 359 VRTLFGPTNQEVANPSW-MSGSFGLGGLTITWNRLWILVFSLSVFFALLMLLKRSAFGLQ 417 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + N++ S+ + FA+ S GMAG A S+ + I Sbjct: 418 MRAVTQNRRMASSMGIRTPWVDAFTFALGSGIAGMAGV--ALSQIDNVSPNLGQTYIIDS 475 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +V+ GG+ +L L + + L+++ + Sbjct: 476 FMVVVFGGVGNLWGTLVGAFSLGILNKFLEPYAGAVLGK-------------ILVLVLII 522 Query: 330 LVILMRSHSLLRLRTPSNF 348 L I R L L+ + Sbjct: 523 LFIQKRPRGLFALKGRAVE 541 >gi|124268859|ref|YP_001022863.1| putative branched-chain amino acid transport system ATP-binding protein [Methylibium petroleiphilum PM1] gi|124261634|gb|ABM96628.1| putative branched-chain amino acid transport system ATP-binding protein [Methylibium petroleiphilum PM1] Length = 632 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 114/335 (34%), Gaps = 26/335 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L+ FL L S I+IL++ +F G I+ G G+LS + G Sbjct: 26 IVLALALMPFLLLAGGGS----VDTAIRILLWGIFGLGFDILFGYAGMLSFGQAAFFGTG 81 Query: 78 AYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 ++ +L S + L I + S +++G+ +LK G Y ++ T + E+ I Sbjct: 82 SFVTAYLLVSGLVTNFLLAIGAGVVASMLFSVLVGMVALKRVGIYFSMITFAIGELCFFI 141 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G RS + MY V+ + + Sbjct: 142 QHSVLSRWTGGDNGLPGVPHPVFQFGDRSFELASGWG---------MYAVIATIFVATFW 192 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + R N + ++ + K++AF V++ + G+AG + + Sbjct: 193 FARRVVTSPFGRVLNATRINPERTLAVGHDVQRYKMAAFVVAAGYAGLAGTLMGIFQSYV 252 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 PD F + V+ ++GG+ +L A+ I + ++ + Sbjct: 253 GPDAFALDTSGQVVMQTVVGGVRTLIGPLVGAAVWIYLRDILQQI------------PGI 300 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ L + ++ + R Sbjct: 301 GGMWKLILGALFILAVTTMRRGIVGEIQHVFYKRR 335 >gi|229489018|ref|ZP_04382884.1| inner-membrane translocator [Rhodococcus erythropolis SK121] gi|229324522|gb|EEN90277.1| inner-membrane translocator [Rhodococcus erythropolis SK121] Length = 362 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 135/327 (41%), Gaps = 22/327 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L V+ + L ++S + + I + GL+IV G GLLS+ + Sbjct: 32 ILQLVLLVAAVCALLLVSQSAPFRVGQFTSVFIIAIAIAGLNIVSGYTGLLSIGHSAFFG 91 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+ +L G S IP++ ++ G+++GLPSL+ +G YLA+ TL ++ F Sbjct: 92 LGAYTTGVLIVDRGYSPLTTIPMAVVLCFVLGLLVGLPSLRIKGLYLALVTLAVAVAFPE 151 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ K +T G AG+ V L + +++++V + Sbjct: 152 VIRKTGDLTGGAAGMVVRANLLVPPKWTG---------LTRADTYLWIFWVSAVTLAVVM 202 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +I L ++ A +RDN+ A + + K+ AF +S A G+AG+ F Sbjct: 203 LLIRNLVKSRFGLAMVAVRDNEIAASANGINVARVKILAFGLSGAITGLAGSLFTMYIGA 262 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +SP+ F ++I I+ ++LGG+ + ++ + + + Sbjct: 263 LSPESFSLMKSIEFITGLVLGGIATQFGPIVGATAVVFLPYYTGSVTDGPVSG------- 315 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + L ++ + ++ Sbjct: 316 ------VVFGAVLIAIVFLMPDGIVGR 336 >gi|254471085|ref|ZP_05084488.1| inner-membrane translocator [Pseudovibrio sp. JE062] gi|211960227|gb|EEA95424.1| inner-membrane translocator [Pseudovibrio sp. JE062] Length = 384 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 120/341 (35%), Gaps = 15/341 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + +L + L + + I+ +FA G +++ G G LS Sbjct: 11 LLMFVLFAAAILTMPLWLAPIGAGYPDLLQKFAIFGLFALGFNLLFGLTGYLSFGHAAFL 70 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG+Y+ V G++ + S + S + +G SL+ G Y +I TL +++ Sbjct: 71 GIGSYAAVWSFKLLGMNPLPALLFSVVFSSLFAVAIGYISLRRSGIYFSILTLAFAQMSY 130 Query: 135 NILIK-WKPITNGKAG-IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 N+ PITNG+ G + S + +Y + Sbjct: 131 NLAYSVLTPITNGETGLRVLQSDPRLFDGASASSGPLISNLFGIEMTGYSGFYFCAVLLI 190 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + I + R+ R ++ NQ L+AF +S F G+AG+ A + Sbjct: 191 IGFYISQRIFRSPFGMMLRAVKSNQNRMSYTGLNTRPYTLAAFVISGTFAGVAGSLLAVT 250 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + +++ + V+ + ILGG +L ++ + N +++ F Sbjct: 251 DPLAGAERMQWTASGEVVLMTILGGAGTLLGPILGAGLIKYFENIFSAYNEQTLHAIFSF 310 Query: 313 DCSF-------------NMRHTTLMVIALFLVILMRSHSLL 340 F + + ++++ ++ Sbjct: 311 LPDFMEGPVVSIASLFVGEGWHLTLGLLFMVIVIFLPGGIM 351 >gi|86749173|ref|YP_485669.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86572201|gb|ABD06758.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 549 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 131/334 (39%), Gaps = 30/334 (8%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 I +LA+ ++ LF+ + + S IY +VVG+ G+ SL Sbjct: 100 KRPIWWMLALAAFFIMPLFVPGSMWNT-VMSAASVFAIYAAINLCWMLVVGTAGIFSLAT 158 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 AY + GL W+L +I A G+++ LP+++ G Y A+ TL + Sbjct: 159 YAVVGAAAYGTTYMAITLGLPWWVLPFAGMLIGLAFGVLIALPAMRLDGFYYALLTLGVV 218 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 E+ + +++ + + G+Y A S + YYV L + Sbjct: 219 ELCRVYVVQSRQFGSATGGLYGAPSYLPAW-------------LSQSNRLLLGYYVALFV 265 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN-TTIIFAKLSAFAVSSAFIGMAGAFF 249 L+ ++ ++ + R ++ ++ F I A++ F +SSA +G G F+ Sbjct: 266 MILALALYRFVDGKRLGRLLRMAQEKKEGFAQACGVDFIRARIMVFLISSAALGFIGGFY 325 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A SP++F F ++ ++++++GG+ T I++ + + + Sbjct: 326 AVHFGGASPNLFSFDTLLLSLAMLVIGGIGRAEGAVAGTLIVVFIDRVLIDLGP------ 379 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 L+ + V+L + ++ Sbjct: 380 ---------LRFVLIGAIMLGVVLFLRGGIFGIK 404 >gi|311695596|gb|ADP98469.1| inner-membrane translocator [marine bacterium HP15] Length = 335 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 130/323 (40%), Gaps = 17/323 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V L+ + L A + + Q+ I GL+++VG G +SL + +GAY Sbjct: 13 LVILALILVILPAFLGNPFHYELVTQMAIIAATVVGLNLLVGFAGQISLGHAGFFGLGAY 72 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 I YG S + V A++ GA I+G P L+ +G YL++ATL + I IL Sbjct: 73 FTGIATGTYGWSSVPALVVGAIVVGAIAWIVGRPILRLKGHYLSMATLAVGFIIAIILNN 132 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + +T G G+ V + + S + + Y + ++ L Sbjct: 133 ERALTGGPDGMPV--PAFEIFGWELSAFGRYSLFGITIEGFQAWYIFASVVLLVAVWFAL 190 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + I A R++ ++ A + K F +S+ + + G+ +A + I+P Sbjct: 191 NLIESPIGRALRSVHGSEVAASVVGVNTAKYKSLVFVISAIYASLMGSLYAHFQGFITPA 250 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + F +I+ I++V+LGGM S + +L + ++ Sbjct: 251 VASFEFSILFITMVVLGGMGSTFGVILGAVVLKLLPQVLADFQE---------------L 295 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 + + L L ++ LL Sbjct: 296 EHVMFGLILMLTMIFMPKGLLPT 318 >gi|306823418|ref|ZP_07456793.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|304553125|gb|EFM41037.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] Length = 365 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 141/351 (40%), Gaps = 42/351 (11%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L + + + + V LL + Y+ + + I V+ L++ +G LG Sbjct: 8 LSIKQSYLVCAIGVAVLFGLLMAVCETGVASLYVKGIIMTCCIAVIMTTSLNLTIGVLGQ 67 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLK 116 L+L C AIGAYS +L + L+ +++ G+++G+P+L+ Sbjct: 68 LTLGCCGFEAIGAYSAALLSKLLVANGVQMDATLRFLLVTFAGGVVACIFGILVGIPALR 127 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 GDYLAI TL EI + I+ K + L + + Sbjct: 128 LHGDYLAIITLGFGEIIRVIIQNLKVAGG------------------KGLSEGQQGQALI 169 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 I + YV+ + ++ ++ R+ A + IRD++ A + I + K+ FA Sbjct: 170 GIDRLANLYVVFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAAGASGINITYLKVMVFA 229 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S+ F G+AG FA ++P M + ++I + +V+ GGM SL+ A L + E Sbjct: 230 ISAFFAGIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVAAVGLTILPE 289 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L + Y + + L L+++ R + S Sbjct: 290 LLRAFSEY---------------RMLVYSVVLVLIMVFRPQGIFGNWEFSL 325 >gi|88798003|ref|ZP_01113590.1| Branched-chain amino acid ABC-type transport system, permease component [Reinekea sp. MED297] gi|88779200|gb|EAR10388.1| Branched-chain amino acid ABC-type transport system, permease component [Reinekea sp. MED297] Length = 537 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 98/297 (32%), Gaps = 21/297 (7%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 + GL+I G +G++++ +GAY+ ++ I + V+ + G Sbjct: 262 ASIGLAITFGVMGVINMAHGEMIMLGAYTTYVVQLLMPNHIDASLWVAIPAAFLVSGAFG 321 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + +L L + +L + + + S + Sbjct: 322 VLIERGVIQFLHGRPL------ETLLATFGISLILQQLVRTIFSPLNRQVDTPSWMSGQF 375 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + + + +Y+ + + A+++L L +T + R + N++ ++ Sbjct: 376 EINPVLFVTLNRFYIFVFALLVFAALVLVLSKTNLGLHVRAVSQNRQMAKAMGIRTARVD 435 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG + + S I +V+ GG+ +L A L Sbjct: 436 ALTFGLGSGIAGIAGVALSQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLFGTLVAAFTL 493 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++ + S L+++ + L I R L + + Sbjct: 494 GIANKVFEPVTGAVLAS-------------ILVLVFIILFIQKRPKGLFPQKGRAAE 537 >gi|39934636|ref|NP_946912.1| branched chain amino acid ABC transporter ATP-binding protein [Rhodopseudomonas palustris CGA009] gi|39648485|emb|CAE27007.1| possible branched-chain amino acid transport system ATP-binding protein [Rhodopseudomonas palustris CGA009] Length = 621 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 116/307 (37%), Gaps = 24/307 (7%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-SIWLLI 96 + + ++L + + G I+ G GLLS Y +G + L + S+WL + Sbjct: 29 FSTDLLTRVLNWGLIGLGFDILFGLTGLLSFGQAAFYGVGGFVTAYLLVSGAVGSVWLAL 88 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPITNGKAGIYVADR 155 V +G G+++G +++ G Y + TL ++ I T G+ GI Sbjct: 89 LVGTASAGVFGLVVGWFAVRRIGIYFTMITLAFGQMAYFIENSPLSDYTGGENGIPGVPA 148 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 F + + + MY + + FL + + R+ + I++ Sbjct: 149 PTLG----------FGADAFRISAGLPMYVLFAVIFFLGYVLARRIVRSPVGAILLAIKE 198 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N L + KL+AF +++ + G+AG + + + PD F + ++ I+ Sbjct: 199 NTGRVAMLGHDVPAYKLTAFVIAALYAGLAGGLLGSFQSYMPPDAFSLETSGQLVVQTIV 258 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG +L A+ + + L+ F M ++ IA ++++ Sbjct: 259 GGAGTLIGPLVGAAV------------WLWLRDNLQLIPGFAMLWKLVLGIAFIVLVIGL 306 Query: 336 SHSLLRL 342 + Sbjct: 307 RRGVCGE 313 >gi|91783056|ref|YP_558262.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91687010|gb|ABE30210.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 325 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 30/320 (9%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 ++ L A S Y + I I+ + A GL+I+ G G SL +AIGAY+ Sbjct: 27 GFVILYALIALFSGGYFVYLLNLIGIFALVAIGLTILTGFSGQTSLGHAGFFAIGAYASA 86 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 I R+G+ WL IP++ + G ++ LP+L+ + YLAIATL + Q ++ +W+ Sbjct: 87 IFAQRWGVPFWLAIPLAGAFATVIGALIALPALRLKDLYLAIATLGFGIVTQKVIFEWRT 146 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ V F + +V+ L Sbjct: 147 VTGGGGGMQVPMPSLFGMSVADGSRM---------------AWVIAATLAAGTWAAFRLA 191 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + A +R+++ A + + K+ AFA+S+ + +AG +A ++P+ F Sbjct: 192 SSRTGRALSMLRESETAAACIGIRVARYKVVAFALSAFYTAVAGGLYANVVRYVNPESFD 251 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + +I+ ++++++GGM S+ A + V E G Sbjct: 252 VNMSIMFLAMIVIGGMGSVRGALLGAAFYVAVPEAFRGFKDAPG---------------L 296 Query: 323 LMVIALFLVILMRSHSLLRL 342 + I+L LV+++ L L Sbjct: 297 IFGISLMLVVILLPGGLTSL 316 >gi|199599625|ref|ZP_03213005.1| Predicted amino acid ABC-type transport system, permease component [Lactobacillus rhamnosus HN001] gi|229553344|ref|ZP_04442069.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258507310|ref|YP_003170061.1| branched-chain amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|258538492|ref|YP_003172991.1| branched-chain amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|199589480|gb|EDY97606.1| Predicted amino acid ABC-type transport system, permease component [Lactobacillus rhamnosus HN001] gi|229313225|gb|EEN79198.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257147237|emb|CAR86210.1| ABC transporter, branched-chain amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|257150168|emb|CAR89140.1| ABC transporter, branched-chain amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] gi|259648667|dbj|BAI40829.1| branched-chain amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 316 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 78/344 (22%), Positives = 144/344 (41%), Gaps = 43/344 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + I + V +L+ + +I++ + I I ++ A GL++++G G SL Sbjct: 6 RSKLIWLAIMVAGFVLIDIGEFTGIVNSFIENALVTIGINIILAVGLNLIIGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ +L + + +I+ +I+G+P+L+ RGDYLAIAT+ Sbjct: 66 HAGFMAIGAYATAIVTQNMATPLGFYLAMLLGMVIAVIAALIVGIPTLRLRGDYLAIATM 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EI + I+ ITNG AG++ L T + Sbjct: 126 GAAEIIRVIINNL-KITNGPAGMFNIPPLASWPT-------------------------V 159 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++ +I+ + A IRD+ A S+ KL+AF + +A + G+ Sbjct: 160 YVLMCVTTVVIVNFVHSRSGRAIMAIRDDDIAAESIGINPTKWKLAAFVLGAATAAIGGS 219 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A+ I+P F +I ++ IV+LGG+ S++ A +L + + Sbjct: 220 LHASYLQTIAPGDFGIMNSISLLIIVVLGGVGSMTGTFVAAIVLGVIDTVLQNF------ 273 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +AL L+++ + LL S +R Sbjct: 274 ---------GTLRMVIYALALILLMVFKPSGLLGHYELSFSRKR 308 >gi|91774512|ref|YP_544268.1| inner-membrane translocator [Methylobacillus flagellatus KT] gi|91708499|gb|ABE48427.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Methylobacillus flagellatus KT] Length = 545 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 128/338 (37%), Gaps = 31/338 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L++ L + + L G +S + + G IY ++V+G+ G+ S Sbjct: 94 LDRRPVYWMLSFIAMVIAPLLMPGGLES--TLLNAGAVFFIYAAINLCWTLVIGTAGIFS 151 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L + GAY L YGL W L V ++I G+++ LP+ + G Y A+ TL Sbjct: 152 LASMAIVGAGAYGAAYLSLTYGLPWWSLPMVGSVIGLVFGILIALPATRLEGFYYALLTL 211 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + E+ + +I+ + + G+Y + S + YYV Sbjct: 212 GLVELCRVYVIQSRTFGSATGGVY-------------GADSYLPDGISEISGLTISYYVC 258 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA-KLSAFAVSSAFIGMAG 246 + + +++ + R + ++AF ++ F ++S +G G Sbjct: 259 FAVMLAVLFMFRFIQGKRLGRILRMAPEKREAFAEATGVNFRWARIQVFIITSVVLGALG 318 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A+ SP +F ++ ++++++GG+ T +++ + ++ Sbjct: 319 GVYASHFHGASPSLFSMDSVLLGLAMLVIGGIGRSEGAVFGTLVVVMIDKVF-------- 370 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + L+ + + V+L + ++ Sbjct: 371 -------IDWGPLRLILIGVIMLSVVLFLKGGVFGIKQ 401 >gi|289582735|ref|YP_003481201.1| inner-membrane translocator [Natrialba magadii ATCC 43099] gi|289532288|gb|ADD06639.1| inner-membrane translocator [Natrialba magadii ATCC 43099] Length = 504 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 72/393 (18%), Positives = 140/393 (35%), Gaps = 55/393 (13%) Query: 10 KYDKILCLLAVVYPLLLFLFLGAT-KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 K ++ + +VY L+ + + + M I +Y M L++ G GL ++ Sbjct: 23 KIIAVIGAIYIVYALIGLILGYSLDGIINTLRRMTYLIAVYGMVTLALNLHWGYTGLFNI 82 Query: 69 NCVIAYAIGAYSYVILGSRYGL-----------SIWLLIPVSAMISGACGMIMGLPSLKF 117 AIG Y ++L + + I + +G G+++ LP+L+ Sbjct: 83 GVAGFMAIGLYVTMMLAKPVDPGGAAQYSGLGLPMPIAIIGGVVAAGLAGLVVALPALRL 142 Query: 118 RGDYLAIATLIMSEIFQ----NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 R DY AI T+ +EI + + ++ I + G L ++I Sbjct: 143 RADYFAITTIAFAEIVRLGVTSDALQQFTILGAELGTGGGRGLIRNYDDPMNVIFQLEIF 202 Query: 174 SSFVIYEIFMY-------------YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 SSFV ++ VL+ + +I R+ + IR++++A Sbjct: 203 SSFVNLTNSLFGFGPTQARALAYSIVLVIVLAGIYWLIQRTSRSPFGRVLKAIREDEEAA 262 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 SL K+ F + A +G+AG + R ++P+ F+ + +I+GG S Sbjct: 263 QSLGKNTNMFKIKVFVLGCALMGLAGILWRFRRTGVTPEAFRPHVTFYIWIALIIGGAGS 322 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFD--------------------------C 314 + + + + V+ + L+ Sbjct: 323 NTGSILGSGLFVAVLFEGPQYLRRVIDQLVAVGDAPNTFAGAVGPLLSANPVPLVRYTFA 382 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F +M +AL L++ R LL R + Sbjct: 383 EFLTLQFVIMGVALILLMQRRPDGLLGHREETA 415 >gi|118589786|ref|ZP_01547191.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Stappia aggregata IAM 12614] gi|118437872|gb|EAV44508.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Stappia aggregata IAM 12614] Length = 328 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 19/315 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88 Y M I I IY + A GL+I G GL + +A+GAY+ IL + + Sbjct: 8 NYALFMAIFIGIYALLALGLNIQWGFAGLFNAGIAGFFAVGAYTSAILTTEHADGRIGGF 67 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + ++ + + + +G L+FR DYLAIA++ ++EI + ++ +TNG Sbjct: 68 DMPFFVGWIGAMIAAALVAWPIGKICLRFRSDYLAIASIGIAEIIRLVVKSEAVLTNGAR 127 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 GI R + ++++ + +++ + + ++ Sbjct: 128 GISGIPRPA-------AEFPSMAQETAYLASQAAYLAIVVVVLVAAYLLVERQFNAPWGR 180 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE-NI 267 R IRDN+ A ++ + F +L AF SA +G+ GA FA I+P+ Sbjct: 181 MMRAIRDNEGAAKAMGKDVEFRRLQAFIFGSALMGLGGALFAHFNRSITPEAIDPMVATF 240 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 +V ++ILGG + A++ + + ++ L+ + Sbjct: 241 LVWIMLILGGSGNNRGAILGAAVVWIIWSMSEIATD---RLPTEYAIQAKYIRLFLIGLM 297 Query: 328 LFLVILMRSHSLLRL 342 L LV+ R LL Sbjct: 298 LQLVLRFRPEGLLPE 312 >gi|121609675|ref|YP_997482.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121554315|gb|ABM58464.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 358 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 82/354 (23%), Positives = 151/354 (42%), Gaps = 23/354 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + + ++ F+ + S + ++ I L++ + A GL+I+ G Sbjct: 18 QIFPIRQDR------IGMALLLVVAFVGIPLLGSAYWFSAILIPFLVFALAALGLNILTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GAY+ R L ++ + GM+ GLPSL+ +G Sbjct: 72 YAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPILLSFILAGACAALVGMVFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL +L K+ +N + ++ + + Sbjct: 132 YLAVATLAAQFFVVWVLTKFPWFSNHSSSGVISAQKVVFLGM-------------DINSP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +LG+ + A + L R++ AW +RD A + ++ AKL AFAVSS Sbjct: 179 VRKYLFVLGIVCVMALLAKNLVRSSTGRAWMAVRDMDVAAEVIGIQLMRAKLLAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 F G+AGA +A + PD F + ++ ++I+GG+ S+ +A ++ + L Sbjct: 239 FCGVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGAFLGSAFILLLPILLD 298 Query: 300 GMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + F L + + + L + +++ H L RL + R Sbjct: 299 NVLPPLATFLHLPFTNATVSHIQMMLFGGLIIFFLIVEPHGLARLWQITKEKLR 352 >gi|73537494|ref|YP_297861.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72120831|gb|AAZ63017.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 341 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 127/320 (39%), Gaps = 28/320 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L L + Y ++ IY + GL+++ G G L+L AIGAY+ Sbjct: 12 LLLALAIAFPQIAPNSYYLTVMTLAFIYAIATLGLNLITGYTGQLNLAHGGFMAIGAYTL 71 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 IL + + WL +S ++ G +GL SL+ +G Y +I T+ + I ++ KW+ Sbjct: 72 GILTVDHQVPFWLAFALSGVVCMVVGYFVGLVSLRLKGHYFSIFTMCIGYIIYLLIEKWE 131 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T+G G+ +G + YY++L + ++ + Sbjct: 132 SLTHGTVGLIGIPVPAAIGPVTFDSVP-------------AQYYLVLAFLAIGTFLMHRI 178 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + ++ +R++ +L ++ K+ +F +S + G AGA +A + PD+ Sbjct: 179 VTSLLGRSFMAVRNSDALAEALGINLMRTKVLSFVLSVGYAGFAGALYAGQVRFLGPDIA 238 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + ++ +++GG +L ++ V + + Y Sbjct: 239 RTDLTFDMVMAMLVGGTGTLFGPLLGAVLVPWVTQTLQFLQDY---------------RM 283 Query: 322 TLMVIALFLVILMRSHSLLR 341 + L L+I+ ++ Sbjct: 284 LVFGPVLILLIIFFPDGIVG 303 >gi|163745501|ref|ZP_02152861.1| branched-chain amino acid ABC transporter, permease protein, putative [Oceanibulbus indolifex HEL-45] gi|161382319|gb|EDQ06728.1| branched-chain amino acid ABC transporter, permease protein, putative [Oceanibulbus indolifex HEL-45] Length = 358 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 78/344 (22%), Positives = 148/344 (43%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y + L ++ + + +++S+ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYVVLFVAIFVI------PFLVNDYWVNSLFLPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ I ++ +I+ A G + GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYASYKLMTAMPDVSMFIHILLAGLITAAVGALFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N A ++ F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAP---------ERDTFGILITGPNTEAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L SA + L R ++ W IRD A + + AKL+AFAVSS FI Sbjct: 185 TYMFCLIFTVFSALVARNLTRGSVGRKWMAIRDMDIAAEIIGVNPLRAKLTAFAVSSFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F + + F ++ +V+ ++I+GG+ S+ A L+ + L Sbjct: 245 GISGALFFSIYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVLLKI 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + ++ + + ++ H L +L Sbjct: 305 VGVDWLGWPTDI---VAHLQLVIVGGLIIIFLIAEPHGLAQLWR 345 >gi|71083361|ref|YP_266080.1| branched chain amino acid ABC transporter [Candidatus Pelagibacter ubique HTCC1062] gi|71062474|gb|AAZ21477.1| Branched-chain amino acid transport protein [Candidatus Pelagibacter ubique HTCC1062] Length = 336 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 23/327 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + ++L L + + I I ++ + A +++ G G +SL + Sbjct: 19 IISLISSLIVLLFALPHFGLNSFYLHLMIMIFMHAVMAQSWNVIAGFSGQISLGHGAFFG 78 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ L +YG+S W+ I + ++SG +++G+P L+ G Y AIATL++ FQ Sbjct: 79 IGAYATSFLYVQYGISPWISIFLGMIVSGVAAVLIGIPMLRLSGHYFAIATLLIGISFQV 138 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I +W+ + V F ++ YY+ L ++ Sbjct: 139 IFQRWEWVGAASG------------VWVPMTSGDSLLALQFHSSKMPYYYIFLVFFIITF 186 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ L R+ + R +RD+ +A SL + K+ A+ +S+ + G+ FA Sbjct: 187 FLVWLLSRSKLGYRLRAVRDDPQAALSLCINVSNYKIIAYVISAMIMAPMGSLFAQYILI 246 Query: 256 ISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I PD +F +IIV+ I +LGG+ ++ AILI + E ++ Sbjct: 247 IDPDRVFNIEISIIVLLITVLGGIGNVWGPIVGAAILIPISEYSRIYLGGTGGAV----- 301 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 L + L L+ + R L+ Sbjct: 302 -----DLILYGLILMLICIFRPEGLIS 323 >gi|332286184|ref|YP_004418095.1| putative branched-chain amino acid transport permease [Pusillimonas sp. T7-7] gi|330430137|gb|AEC21471.1| putative branched-chain amino acid transport permease [Pusillimonas sp. T7-7] Length = 337 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 118/330 (35%), Gaps = 30/330 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + ++ L L + + ++ ++ +ILI+ + A L++++G GL+S Sbjct: 13 ASFVVNAVLLIALALVPLYARSMADPFVVTLITRILIFAIAALSLNLILGYGGLVSFGHA 72 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + +G Y I + WL + + + G G++ G +L+ G + TL ++ Sbjct: 73 LYLGLGVYCAAIPSFHGMDNGWLQLLATLAVCGMVGLLTGSIALRTSGISFIMITLAFAQ 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 +F + + L F + +Y+V + Sbjct: 133 MFYFLFVSLSQYGG---------------DDGLRLASGSNFSGIVLTDPRTLYFVAFLVL 177 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 LS L + R + N++ +L +L+ + VS+ G+AG + Sbjct: 178 CLSLYACHRLVHSRFGIVIRASKSNEQRMKALGYPTYRYRLAVYVVSAILCGIAGLLYGN 237 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 SP ++ + +I +V+LGG+ +L +I E + ++ Sbjct: 238 LTQFGSPSYMSWTTSGELIVMVMLGGIGTLFGPLLGALAMILTEEGLKALTEHW------ 291 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + ++I++ + Sbjct: 292 ---------MAIFGPLIVIIIIVSRLGIAG 312 >gi|83855168|ref|ZP_00948698.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83843011|gb|EAP82178.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] Length = 358 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 77/344 (22%), Positives = 145/344 (42%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y L L + + + +++S+ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYLVL------FIAVAVIPFVINDYWVNSLFLPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ + + +S+ + + +S +++ G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKFMTAFPDVSMLVHVLLSGLVTAGVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N A ++ + + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAPERTFFGIEITGPNTQAW---------A 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L SA + L R ++ W IRD A + + AKL+AFAVSS FI Sbjct: 185 TYLFCLMFVIFSAYVARNLTRGSVGRKWMAIRDMDIAAEIIGVNPLRAKLTAFAVSSFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F ++ +V+ ++I+GG+ S+ A L+ + Sbjct: 245 GISGALFFAVYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVALKI 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + +F ++ + + ++ H L +L Sbjct: 305 VGVDWFGWPTDI---VAHLQLVIVGGLIIIFLIAEPHGLAQLWR 345 >gi|226946375|ref|YP_002801448.1| amino acid ABC transporter-like protein [Azotobacter vinelandii DJ] gi|226721302|gb|ACO80473.1| amino acid ABC transporter-like protein [Azotobacter vinelandii DJ] Length = 355 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 66/337 (19%), Positives = 128/337 (37%), Gaps = 16/337 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + + F + + + ++ I L+ + GL+++ G G LSL A+ Sbjct: 27 LGLALLLVFAFAVVPWLGNDYWFGAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ GL + + + +++ ++ GLPSL+ +G YL ++TL Sbjct: 87 GAFAAYNFELRVPGLPLPASLLLGGLVAALVALLFGLPSLRIKGFYLIVSTLAAQFFVPW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L ++ +N A ++ Y + LG+ Sbjct: 147 ALTRFGWFSNYDASGVISAPKLE-------------IFGIDFGTPAGRYLLTLGVVTALF 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + L R+ + W +RD A + ++ KL AFA+S F+G+AG+ +A A Sbjct: 194 WLGHNLVRSELGRNWMAVRDMDTAAAVIGIPLLKTKLLAFAISGFFLGVAGSLWAFAYLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F + + V+ IVI+GG+ S+ A ++ L + L+ Sbjct: 254 TVEPHGFDLNRSFQVLFIVIIGGLGSILGNFLGAAFMVLFPLLLSNLAGLLPGGLIDAG- 312 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + ++ L RL R Sbjct: 313 QLENLQKIVFGALIVVFLIKEPEGLARLWQRLRERAR 349 >gi|283455534|ref|YP_003360098.1| branched-chain amino acid transporter permease [Bifidobacterium dentium Bd1] gi|283102168|gb|ADB09274.1| Branched-chain amino acid transport system permease protein [Bifidobacterium dentium Bd1] Length = 359 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 141/351 (40%), Gaps = 42/351 (11%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L + + + + V LL + Y+ + + I V+ L++ +G LG Sbjct: 2 LSIKQSYLVCAIGVAVLFGLLMAVCETGVASLYVKGIIMTCCIAVIMTTSLNLTIGVLGQ 61 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLK 116 L+L C AIGAYS +L + L+ +++ G+++G+P+L+ Sbjct: 62 LTLGCCGFEAIGAYSAALLSKLLVANGVQMDATLRFLLVTFAGGVVACIFGILVGIPALR 121 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 GDYLAI TL EI + I+ K + L + + Sbjct: 122 LHGDYLAIITLGFGEIIRVIIQNLKVAGG------------------KGLSEGQQGQALI 163 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 I + YV+ + ++ ++ R+ A + IRD++ A + I + K+ FA Sbjct: 164 GIDRLANLYVVFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAAGASGINITYLKVMVFA 223 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S+ F G+AG FA ++P M + ++I + +V+ GGM SL+ A L + E Sbjct: 224 ISAFFAGIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVAAVGLTILPE 283 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L + Y + + L L+++ R + S Sbjct: 284 LLRAFSEY---------------RMLVYSVVLVLIMVFRPQGIFGNWEFSL 319 >gi|297565971|ref|YP_003684943.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] gi|296850420|gb|ADH63435.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] Length = 358 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 66/304 (21%), Positives = 121/304 (39%), Gaps = 21/304 (6%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + I IY + GL+I G GL+S+ +GAY+ + L WL +P+ + Sbjct: 52 VLNFIFIYAIAVLGLNITTGYAGLISVGQAAFVGVGAYTAALTA--PYLPFWLTVPMGGL 109 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 ++ G I+GLPSL+ + YLA+ATL EIF + + + G A Sbjct: 110 VAAGIGWIVGLPSLRVKHLYLALATLAFQEIFVWSVGRMPALAQGAAIPVEMRNFLGYEI 169 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 R+ F+ YYV+L + L L R A +RDN +A Sbjct: 170 NFRNHNFFW-------------YYVILLVLVLMVIAWRNLLRGKYGRALIAVRDNDRAAD 216 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 ++ KL AFA+ + + G+AG A + + + F ++++ +++ I+GG+ ++ Sbjct: 217 AMGMDPGRTKLLAFALGAFYGGIAGGLLAYFQRAVVIEEFTLAKSVTFLAMAIVGGLGTV 276 Query: 282 SKIAKATAILIGVVELCCGM------NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 A + + + N + + + + L ++ Sbjct: 277 VGSLLGPAFIEYLRLWMERLSEAIKHNPSVQQVIPAGVDLASALLPLAFGLVIVLFLIFE 336 Query: 336 SHSL 339 L Sbjct: 337 PRGL 340 >gi|157151236|ref|YP_001450905.1| branched-chain amino acid permease protein [Streptococcus gordonii str. Challis substr. CH1] gi|157076030|gb|ABV10713.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus gordonii str. Challis substr. CH1] Length = 317 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 78/340 (22%), Positives = 141/340 (41%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L + +L+ + G + + +I I ++ A GL+++VG G SL Sbjct: 6 KVNLLWLALILAGFVLITVLAGGGILNAFHLQILEEIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G+ + + + + A I+G + +G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGTKSPTYPAFFAAMILGAFIAGLVALGVGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +++ +TNG AGI + Sbjct: 126 GVSEIIRILIVNGGEVTNGAAGILSIPGFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ L R+ + ++R+++ A S+ AK+ AF + +AGA Sbjct: 161 YFFAVITTLFTLNFLRSPLGRKTLSVREDEIAAESVGVNTTKAKVVAFVFGAVTASIAGA 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I V+ IV+ GG+ S++ A +L + L Sbjct: 221 LKAGFIGAVVPKDYSFTNTINVLIIVVFGGLGSMTGTIIAAIVLGVLNMLLQ-------- 272 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F+ + +AL LV++ R LL Sbjct: 273 -------EFSSIRMIIYSLALILVMIFRPGGLLGTWELQL 305 >gi|295397178|ref|ZP_06807281.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Aerococcus viridans ATCC 11563] gi|294974567|gb|EFG50291.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Aerococcus viridans ATCC 11563] Length = 328 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 133/336 (39%), Gaps = 43/336 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 K + + L+ + ++ + I I ++ A GL++VVG G S Sbjct: 12 FTKSTITWICVILGLFFLIMAAYLMGLVTSFYQNIMVTIGINMILAVGLNLVVGYAGQFS 71 Query: 68 LNCVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L AIGAY IL ++ + + + A+++ +I+G+P+L+ +GDYLAIA Sbjct: 72 LGHAGFMAIGAYVGAILSTQIPGPIGFYAGMAAGAVLAAIVALIVGVPTLRLKGDYLAIA 131 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL SEI + I+ ITNG AGI + Sbjct: 132 TLGASEIIRVIIQNL-KITNGAAGISGIPM-------------------------NVTWI 165 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 L L+ I+ ++ A +R+N+ A S+ K+ AF + + +A Sbjct: 166 TLFIFIVLTTLFIVNYIHSSPGRATIAVRENEIAAESVGVKTTKYKIIAFVIGAVTASIA 225 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G +A I+P F F +I V+ IV+ GG+ S++ A L + + + Sbjct: 226 GTLYAGYFSVINPSQFTFQRSIDVLIIVVFGGIGSVTGSFVAAIALGLLNSVLAPL---- 281 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + IA+ +++ + L+ Sbjct: 282 -----------GQLRMVVYGIAIIAIMVFKPSGLMG 306 >gi|225573612|ref|ZP_03782367.1| hypothetical protein RUMHYD_01806 [Blautia hydrogenotrophica DSM 10507] gi|225039030|gb|EEG49276.1| hypothetical protein RUMHYD_01806 [Blautia hydrogenotrophica DSM 10507] Length = 354 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 77/337 (22%), Positives = 137/337 (40%), Gaps = 24/337 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + K + I + +V +++ + + + + + YV+ A L++VVG LG L Sbjct: 7 KNTKQNLITYGIVIVAFVVVQCLIATGSISSLMQGLMVPLCTYVILAVSLNLVVGILGEL 66 Query: 67 SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL +GA+S +L + V + G+++G+P L+ +G Sbjct: 67 SLGHAGFMCVGAFSSAFFSMCTQDTITVASLRFFLALIVGVATAAVFGILIGIPVLRLKG 126 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +N++ + + + L + Sbjct: 127 DYLAIVTLAFGEIIKNLVNVLYIGKDKNGFHFSMKDMMSLNMEPDGKVIVNGPQGITGAP 186 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + + + + +S IIL L + A IRDN+ A S+ I KL AF VS+ Sbjct: 187 SDSTFLIGVILVLVSLFIILNLTDSRDGRAIMAIRDNRIAAESVGINITKYKLMAFTVSA 246 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAILIGVVEL 297 A G AG +A + ++ F N I+++ V+LGG+ ++ A IL + EL Sbjct: 247 ALAGAAGVLYAHNLSSLTATTNNFGYNMSIMILVFVVLGGIGNIRGSMIAAVILTLLPEL 306 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 G++ Y + I L +++L Sbjct: 307 LRGLSDY---------------RMLIYAIVLIVMMLF 328 >gi|311107130|ref|YP_003979983.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310761819|gb|ADP17268.1| inner-membrane translocator 41 [Achromobacter xylosoxidans A8] Length = 345 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 72/322 (22%), Positives = 131/322 (40%), Gaps = 17/322 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + L L + + Y + + I V A GL+I+ G GL+SL +GA Sbjct: 24 AWLVLLAASLVMFPFVADAYWLYLACLVAINVASATGLNILTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L R G + L + +++ G+++G+PSL+ +G YLAIAT+ S I I Sbjct: 84 YTVAVLEQRLGTPVLLNLVAGGLVAMLGGLLVGIPSLRVKGLYLAIATIAASFIAHFIFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W+ R + +Y++++ + L Sbjct: 144 NWQFTGGTTGMQVPPAR----------------VLGVDLDTSFKIYWLIVPVTALMVLGA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT I A+ IRD + L ++ KL +F +SS + G+AG +A ++P Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIRLLRYKLLSFGLSSFYAGVAGGMWAYFFRVVTP 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++ +I+GGM ++ + V EL + + + Sbjct: 248 ESFPLIMSIFFLAAIIVGGMGTILGSILGAIFMTMVPELLK-LIVGWLPVGGDALRLISP 306 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 T + + + ++ H L Sbjct: 307 VRTIVFGLLIVGFLIFEPHGLA 328 >gi|154245652|ref|YP_001416610.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154159737|gb|ABS66953.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 348 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 131/324 (40%), Gaps = 19/324 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A+ L + ++ I +L + A + + G +G LSL + +G Sbjct: 26 IALAVLSGAAALLPLVTADSFLIHSAIMVLFFAYMATSWNFLCGYVGQLSLGHAMFSGVG 85 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y V+L + YG+S W+ + V +++ A +++G P+ + +G Y A+ T+ +EI + + Sbjct: 86 GYVSVLLSTTYGVSPWIGMLVGGVVAAALSVLIGYPTFRLKGPYFALTTIAFAEIVRIWV 145 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 R+ V + F + + YY++L M L+ Sbjct: 146 ENTDSFLG--------FRIKGAEGLVVPGVGGDSFWAFQFSGKTAYYYIILAMLALAILA 197 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + R+ + + IR ++ A +L + +AFA+S+ + G+F+A I+ Sbjct: 198 TMVMERSKLGYCLKAIRGDRDAAEALGISPTRYTQAAFAISAFMTALGGSFYAQFFRYIN 257 Query: 258 PD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ +I + + I+GG + +L+ + E+ G F Sbjct: 258 PERNMGLELSIDMALMSIIGGQGTPFGPLVGALLLMPLGEISRGY----------LGGQF 307 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 H + + L + +L L+ Sbjct: 308 LGLHLVIYGVVLMITVLYFPKGLI 331 >gi|114568058|ref|YP_755212.1| inner-membrane translocator [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338993|gb|ABI69841.1| inner-membrane translocator [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 322 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 134/335 (40%), Gaps = 41/335 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + I L+ L+ + + +Y + I ++ A L+++ G G LSL Sbjct: 9 RSFLIEVLVLAGIFTLVQYLIISGLLNEYYQINLSSMCINIILAVSLNLINGFTGQLSLG 68 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 A+GAY+ V++ + Y L + + + +G G+I+G+P+L+ +GDYLAIATL Sbjct: 69 HAGFMAVGAYAAVVVTTIYSQPFILGLLAACLAAGLAGLIIGVPTLRLKGDYLAIATLGF 128 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 EI + IL G AGI R L Sbjct: 129 GEIIRVILQN-IDFIGGPAGILGIPRYSTWP-------------------------WLFA 162 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + II+ L ++ A ++R+++ A + K+ AF + + F G+AGA + Sbjct: 163 LTVFTIVIIVNLINSSYGRAIISVREDEVASELMGINTTNYKVLAFVIGALFAGLAGALY 222 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A I P F F ++ ++ +V+LGG+ S + A + + Sbjct: 223 AHYFYIIKPSTFNFLKSFDILVMVVLGGLGSTTGAVIAAIFVTMLTAALQTF-------- 274 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L + L +V++ R L+ + Sbjct: 275 -------PAIRMVLYAVTLVVVMVYRPQGLMGNKE 302 >gi|319654208|ref|ZP_08008297.1| hypothetical protein HMPREF1013_04917 [Bacillus sp. 2_A_57_CT2] gi|317394142|gb|EFV74891.1| hypothetical protein HMPREF1013_04917 [Bacillus sp. 2_A_57_CT2] Length = 325 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 130/310 (41%), Gaps = 19/310 (6%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + ILI ++ + I + S G LSL IGAY+ +L + L I Sbjct: 5 LINPYYLQVASFILINIILGVSIYITL-STGQLSLANAGFMGIGAYTSALLTLNFDLPII 63 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + I +++G G+++G+P+L+ +G YLAI TL E+ + I + W+ +T G G+ Sbjct: 64 VGILSGTLLAGLFGILIGIPTLRLQGVYLAIVTLGFGEVIRVIFVNWESMTKGAVGLSGI 123 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR---TAISNAW 210 + F + + L + ++ SII + RR + + A+ Sbjct: 124 PHMGRELLNTLKEFGFDPKILGLQNNQFVFLAIFLILLGVTISIITFFRRQNRSRVGRAF 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 I+ ++KA S+ I + K+ AFA + G AGA FA ISP F + + ++ Sbjct: 184 AAIKLDEKAAESMGINITYYKVLAFAQGALVAGFAGALFAHVLAYISPADFAYHRAVEIL 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + GG + L + E+ ++ Y + + + + Sbjct: 244 IFAVFGGSEVIWGPVFGALFLTVMPEVLRFISEY---------------RYMIYGLIIII 288 Query: 331 VILMRSHSLL 340 ++ +R L+ Sbjct: 289 MMAVRPQGLI 298 >gi|182416034|ref|YP_001821100.1| urea ABC transporter, permease protein UrtC [Opitutus terrae PB90-1] gi|177843248|gb|ACB77500.1| urea ABC transporter, permease protein UrtC [Opitutus terrae PB90-1] Length = 418 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 97/345 (28%), Gaps = 32/345 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L+A++ ++ L + ++ + L Y + A + ++ G GLLSL + + Sbjct: 57 IALVALLLIVVFPLLNAQGLISDFTLNLWAKYLCYALLAISVDLLWGYTGLLSLGQALFF 116 Query: 75 AIGAYSYVILGSR----------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 ++G Y + R + + + + S + + Sbjct: 117 SLGGYMMGMYLMRMIGDLGQYRKPIPDFLVFLGWTELPSFWKPFDQFPFAAAMVLLLPGV 176 Query: 125 ATLIM--------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 L + ++ ++ D L Sbjct: 177 VALGFGFLAFRARIKGVYFSILTQALTYGASLVLFRNDLLMGGNNGFTDYKFILGHDLRS 236 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 + +Y L WL RT R IRD + KL F Sbjct: 237 AATQRALYVATAVALVLVFLGCRWLSRTKFGLVQRAIRDGENRVLFSGYAAGHFKLFVFV 296 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 V++ + GA + I+P +++ + V +GG +L + + Sbjct: 297 VAALIAAVGGALYVPQVGIINPSEMTPDKSLEAVVWVAVGGRGTLVGPVVGAITINALKS 356 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ L+ LV+L ++ Sbjct: 357 WATR--------------AYPDLWLLLLGAMFILVVLFLPGGIVS 387 >gi|73539969|ref|YP_294489.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72117382|gb|AAZ59645.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 358 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 82/354 (23%), Positives = 145/354 (40%), Gaps = 23/354 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + V + F + S+ + ++ I LI+ + A GL+I+ G Sbjct: 18 QIFPIRQDR------IGFAVLMAVAFGVIPFVGSEYWFSAILIPFLIFSLAALGLNILTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GAY+ R L ++ + + G+ GLPSL+ +G Sbjct: 72 YAGQLSLGTAAFMAVGAYAAYNFQLRIEGMPVLLTFILAGLSAAVVGVAFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL L K+ +N + + + + Sbjct: 132 YLAVATLAAQFFVVWALTKFPWFSNNSSSGVI-------------TAQRLDLFGIAIDTP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +L + + A I L R+A AW ++RD A + ++ KL AFAVSS Sbjct: 179 VKKYLFVLALVTVLAFIAKNLVRSATGRAWMSVRDMDVAAEVIGIPLMRTKLLAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 + G+AGA +A + PD F + V+ ++I+GG+ S+ A ++ + Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRVLFMIIIGGVGSILGSFLGAAFILLLPIFLD 298 Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L + + H + + +++ H L RL S R Sbjct: 299 NVLPPLASLLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARLWQISKEKLR 352 >gi|42524746|ref|NP_970126.1| branched-chain amino acid ABC transporter, permease protein [Bdellovibrio bacteriovorus HD100] gi|39576956|emb|CAE78185.1| branched-chain amino acid ABC transporter, permease protein [Bdellovibrio bacteriovorus HD100] Length = 323 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 133/342 (38%), Gaps = 40/342 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + L + YI + + + + + L++V G G SL AIG Sbjct: 8 ALTLLCLAVLGLGLDFGVNAYIKLILLFATVNCLLSMSLNLVNGYTGQFSLGHAGFMAIG 67 Query: 78 AYSYVILGSRYGLSI--------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 AY +++G ++ + + + + G ++GLPSL+ +GDYLAI TL Sbjct: 68 AYFSAYASTKWGFLPESLQLLQSFVFVIGAGLAAAVAGFLVGLPSLRLKGDYLAIVTLGF 127 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 EI + L+ + G G+ F + Sbjct: 128 GEIIRVALLNMDFL-GGPRGLSGIPSFGSFP---------------------FAFMFASV 165 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + I + ++ + ++R+++ A ++ K+ AF +SS F G+AGA F Sbjct: 166 WLVICFFTIWRVMHSSHGRGFLSVREDEIAAEAMGINTTRMKVKAFVLSSFFAGVAGALF 225 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + I+P F F +++ + +V+LGGM S++ A I+ + E + Sbjct: 226 AHFTNFINPSSFTFLQSVNAVIMVVLGGMGSMTGSIVAAVIITVLPEALRPLQE------ 279 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + +AL L++++R L S+ + Sbjct: 280 ----LTGVDLRMVIYSLALILMMILRPKGLFGDMEFSDVWRK 317 >gi|163857609|ref|YP_001631907.1| branched chain amino acid ABC transporter permease [Bordetella petrii DSM 12804] gi|163261337|emb|CAP43639.1| Branched-chain amino acid ABC transporter, permease protein [Bordetella petrii] Length = 335 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 18/286 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + L Y + I Y + L++VVG GLLS+ V AIGAY Sbjct: 11 LAIGVAALATLPFWAGNPYQLHVATLIGTYWILIASLNLVVGYTGLLSIGHVGLLAIGAY 70 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 ++ IL Y S W+ + +A++ GACG ++GLPSL+ G Y A+AT+ + + + Sbjct: 71 TFAILTGAYDTSPWVAMAAAAVLCGACGFLLGLPSLRLPGFYFAMATMAFALMVTEFSLA 130 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 +T G AG+ VA +Y+++ + + + ++ Sbjct: 131 SDELTGGGAGLSVASFDAPFD------------------SPSGLYWLVAAVAGIVSWLVW 172 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R + A +RD+ + + KL+ F S G+AGA FA+ + I+P+ Sbjct: 173 NLARYSWGRAMIALRDSTVTAAATGIPVFRVKLAVFTFSGVTAGIAGALFASLQSYITPE 232 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 F F ++ +++GG + T +L + EL + + Sbjct: 233 TFVFELSLFFFVCIVIGGRGVIMGPFVGTIVLAALPELVAPLARWG 278 >gi|312200548|ref|YP_004020609.1| inner-membrane translocator [Frankia sp. EuI1c] gi|311231884|gb|ADP84739.1| inner-membrane translocator [Frankia sp. EuI1c] Length = 468 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 80/331 (24%), Positives = 144/331 (43%), Gaps = 35/331 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----- 85 S SM I IY + A GL++V+G G+L L + +AIGAY+ Sbjct: 139 PMFFSTAAQQSMVNDIGIYALLALGLNVVIGYAGMLDLGYIAFFAIGAYATAYFSYKHTS 198 Query: 86 ------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + L+ + + P++ +++ G+I+G P+L+ RGDYLAI TL EI Q ++ Sbjct: 199 PPLPVHAPFSLNPFFVFPIAFVLAALAGIILGAPTLRLRGDYLAIVTLGFGEIIQ-LIAN 257 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 TNG G + L + F ++ + YY+LL + + + Sbjct: 258 NSSWTNGPRGAFGVPHLS---------VHIGGFNYAWKLDPRPYYYLLLVIIVIVMLALG 308 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ I AW IR+++ A + + KL AFA+ ++ G AG FA+ + +P Sbjct: 309 RLERSRIGRAWAAIREDEIAAEATGVPTLRMKLLAFAIGASVSGFAGVLFASKQFF-NPG 367 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 +F + +V++IVI GGM + + + +L G+ D Sbjct: 368 VFSLQASFLVVTIVIFGGMGNRLGVVVGSVVLQGLAFYLR-------------DKVPATD 414 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + ++++ R ++ R ++ Sbjct: 415 RYIWFGAVVIVMMIFRPQGVVPSRRRGREIK 445 >gi|192290152|ref|YP_001990757.1| ABC transporter [Rhodopseudomonas palustris TIE-1] gi|192283901|gb|ACF00282.1| ABC transporter related [Rhodopseudomonas palustris TIE-1] Length = 621 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 116/307 (37%), Gaps = 24/307 (7%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-SIWLLI 96 + + ++L + + G I+ G GLLS Y +G + L + S+WL + Sbjct: 29 FSTDLLTRVLNWGLIGLGFDILFGLTGLLSFGQAAFYGVGGFVTAYLLVSGAVGSVWLAL 88 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPITNGKAGIYVADR 155 V +G G+++G +++ G Y + TL ++ I T G+ GI Sbjct: 89 LVGTASAGVFGLVVGWFAVRRIGIYFTMITLAFGQMAYFIENSPLSDYTGGENGIPGVPA 148 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 F + + + MY + + FL + + R+ + I++ Sbjct: 149 PTLG----------FGADAFRISAGLPMYVLFAVIFFLGYVLARRIVRSPVGAILLAIKE 198 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N L + KL+AF +++ + G+AG + + + PD F + ++ I+ Sbjct: 199 NTGRVAMLGHDVPAYKLTAFVIAALYAGLAGGLLGSFQSYMPPDAFSLETSGQLVVQTIV 258 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG +L A+ + + L+ F M ++ IA ++++ Sbjct: 259 GGAGTLIGPLVGAAV------------WLWLRDNLQLIPGFAMLWKLVLGIAFIVLVIGL 306 Query: 336 SHSLLRL 342 + Sbjct: 307 RRGVCGE 313 >gi|146341488|ref|YP_001206536.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146194294|emb|CAL78316.1| putative branched-chain amino acid ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 333 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 112/302 (37%), Gaps = 25/302 (8%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ + +LIY + G +++ G GLLS GAY I R+GL + +P++ Sbjct: 45 ALAVNVLIYGVVVMGYNLLFGYTGLLSFGHAAFSGAGAYLTGIAIGRWGLPWFAAVPLAI 104 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 S A ++G S + RG Y ++ TL ++++ + ++ +T G+ G Sbjct: 105 AASTALAALIGTISTRTRGIYFSMVTLALAQLVYYVALQASSLTGGENG----------L 154 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + + YY+L+ L+ + + + IR+N++ Sbjct: 155 RGFTVDRINLFGLPINFLDPVNKYYLLMAFAALALWVQSRILNSPFGAVIEAIRENEQRA 214 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + KL F +S A + G A + D + + +++ +V+LGG S Sbjct: 215 RACGYDVERCKLIVFMLSGAISAVGGCMSALHLSIVPLDSLHYQTSGMIVMMVLLGGARS 274 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A + + ++ ++ ++ + +L + Sbjct: 275 FFGPFIGAATFLILEDVVSLWTPHW---------------QIVVGAIFVVFVLFLPKGIW 319 Query: 341 RL 342 Sbjct: 320 GT 321 >gi|78223028|ref|YP_384775.1| inner-membrane translocator [Geobacter metallireducens GS-15] gi|78194283|gb|ABB32050.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Geobacter metallireducens GS-15] Length = 328 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 142/321 (44%), Gaps = 29/321 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + +L LFL Y+ ++ + + I+ + A L++++G G +SL + +GAY+ Sbjct: 16 ILFTILILFLPLAFKGGYLLNVFVFVGIHTLLAVALNLLLGYAGQISLGHAAFFGLGAYA 75 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 IL + +G + WL + V A G I+G P LK +G YLA+ATL I + Sbjct: 76 SGILTATHGQNPWLAMAVVAAAVGTLAFIIGFPILKLKGHYLAMATLGFGIIVYIAFNEA 135 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G +G L G + + + YY++ GM ++ + L Sbjct: 136 VELTGGPSGFSGIPNLSLGGFSFDTDFKN--------------YYLIWGMTLVTILLSLN 181 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + I + I D++ A + + F K+ FA+S+ +AG+ +A + +SP Sbjct: 182 LVNSRIGRGLKAIHDSEVAARVMGVNVRFLKVQIFALSAVISSIAGSLYAHTMTFVSPTS 241 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F+ ++ ++++VI+GG+ S+ A+L + E+ Y Sbjct: 242 FGFNFSVELVTMVIIGGLGSIYGSFLGAALLTFLPEILRAFQDY---------------D 286 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + + L + L L+R Sbjct: 287 IVVYGLLLIFMTLFMPGGLVR 307 >gi|51891961|ref|YP_074652.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51855650|dbj|BAD39808.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 349 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 72/338 (21%), Positives = 124/338 (36%), Gaps = 41/338 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L V ++L L Y + LI A GLS++ G G SL V Y Sbjct: 27 AALIVALYIVLSLLRQQGIIGTYWGMILDLALITTTSAIGLSLIYGFAGQFSLGHVAFYG 86 Query: 76 IGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 IG Y + Y L+ L + + + ++GLP L+ R DYL IATL I Sbjct: 87 IGGYVSAYITKAYGATTLNFVLGLAAGTLAAALIAFLIGLPILRLRSDYLGIATLGFGVI 146 Query: 133 FQNILIKWKPIT---NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + I+ G G+ RL + Sbjct: 147 VKVFMDNSDKISKLLGGSMGMTGIPRLTTFP-------------------------WVFW 181 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 L + L ++ A ++R+++ A + K+ AF + A G+AG + Sbjct: 182 SAVLVILLARNLVHSSHGRACISVREDEIAADIMGIDTTRFKMLAFVLGCAMAGLAGGLY 241 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + P F+F ++ V+ IV+LGG+ SL+ A ++ + E+ + Sbjct: 242 AHLYVYLHPKSFEFLKSFDVLLIVVLGGLGSLTGTVVAGMGVVFLQEVLRDV-------- 293 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F + + L +++++R L+ S Sbjct: 294 --LGQQFLEWRGVVYALVLIVLMILRPQGLMGGWEFSL 329 >gi|332284562|ref|YP_004416473.1| high-affinity branched-chain amino acid transport system permease protein [Pusillimonas sp. T7-7] gi|330428515|gb|AEC19849.1| high-affinity branched-chain amino acid transport system permease protein [Pusillimonas sp. T7-7] Length = 345 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 76/322 (23%), Positives = 136/322 (42%), Gaps = 17/322 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + L L L + Y + + I+ A GL+I+ G GL+SL +GA Sbjct: 24 AWMLVFGLALLLYPFLANDYWLYLACLVAIHAASATGLNILTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L RYG L + V+ +++ G+++G+PSL+ +G YLAI T+ S I I Sbjct: 84 YTVAVLEQRYGTPFLLNLIVAGVVAMLGGLVVGIPSLRVKGLYLAIVTIAASFIVHFIFG 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 T G G+ V + F S +Y++++ + L Sbjct: 144 NLA-FTGGSGGMTVPPPVLFGVALDTSFK---------------IYWLIVPVTILMVLGA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT + A+ IRD + L ++ KL +F +SS + G+AG +A ++P Sbjct: 188 ANLFRTRVGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++ +I+GGM S+ A + V E+ + + Sbjct: 248 ESFPLILSIFFLAAIIVGGMGSILGAILGAAFMTMVPEVLR-LVIGLLPIEGDTLRYVSP 306 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 T + + + + ++ L Sbjct: 307 VRTIVFGLLIVVFLIFEPQGLA 328 >gi|325293763|ref|YP_004279627.1| urea/amide ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325061616|gb|ADY65307.1| urea/amide ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 537 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 96/297 (32%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAYS ++ L S I+ ++ Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMIGAYSTFMVQELIRSHFPGLFDWSLAIALPAAFLVT 317 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + G+ S Sbjct: 318 ACVGLIMER--GVIRYLYGRPLETLLATWGISLILQQGVRSIFGPTNREVGSPSW-MSGS 374 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F ++ + +++ + ++++ L+R+A R + N++ S+ + Sbjct: 375 FSVGYLNFTWNRVWIVCFSLSVFFALLVLLKRSAFGLQMRAVTQNRRMASSMGIRTPWVD 434 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S G+AG A S+ S I +V+ GG+ +L L Sbjct: 435 AFTFALGSGVAGLAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALSL 492 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L+++ + L I R L L+ + Sbjct: 493 GVLNKFLEPTVGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAIE 536 >gi|224541726|ref|ZP_03682265.1| hypothetical protein CATMIT_00898 [Catenibacterium mitsuokai DSM 15897] gi|224525330|gb|EEF94435.1| hypothetical protein CATMIT_00898 [Catenibacterium mitsuokai DSM 15897] Length = 315 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 138/323 (42%), Gaps = 41/323 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L++V +L + + Y + I I ++ A L++ G LG L+L + Sbjct: 13 FILSIVIFAVLMIGTATSVINSYWQGVLILCGINIILAVSLNLAAGYLGQLTLGHAGFMS 72 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+ ++ L + + + A+ +G G+I+G+P L+ +GDYL I TL +EI + Sbjct: 73 VGAYTSALISIYLNLPFIVSLLIGAIAAGIIGLIIGIPVLRLKGDYLCIITLAFNEIIRV 132 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I+ ITNG G+ + ++ Sbjct: 133 IMNNL-DITNGAKGLIGIPMNTN-------------------------LVYVFIAMIITI 166 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ + ++ A +IR+++ A + + K+ AFAVS+ F G+AG +A Sbjct: 167 FVVYSIVKSRHGRAIISIREDETASELSGIDVGYYKVFAFAVSAIFAGLAGGLYAHYYTV 226 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I P F F++++ ++ +V+LGGM +L A +L + EL S Sbjct: 227 ILPKGFDFNKSVEILVMVVLGGMGNLKGSIIAAIVLTIIPELL---------------IS 271 Query: 316 FNMRHTTLMVIALFLVILMRSHS 338 F+ L I L ++++ Sbjct: 272 FSQYRMLLYAIVLIAAMILKGTG 294 >gi|88797768|ref|ZP_01113356.1| inner-membrane translocator [Reinekea sp. MED297] gi|88779445|gb|EAR10632.1| inner-membrane translocator [Reinekea sp. MED297] Length = 350 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 18/310 (5%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + Y+ + QI IYV+ G++++VG GL+SL +A+GAY+ VIL L Sbjct: 40 ADNYVLLLAGQIAIYVIAVTGVNVLVGYTGLMSLGHGAFFAVGAYTTVILHQYVEHLFPL 99 Query: 95 -LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIY 151 + VS +++ G + GLPSL+ +G YLA+ATL + I + + P T G+ GI Sbjct: 100 ITLLVSIVVAAGFGFLFGLPSLRVKGLYLAVATLSANFIILFFIRQDWAAPWTGGRQGIE 159 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + ++F + + + YY ++ +C L RT A Sbjct: 160 TPNAMFFGQEMLSNTQK---------------YYFIIPICLAMVLFAQNLFRTRFGRALI 204 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IRDN + L ++ KL +FA+S+A+ G AG+ +A I P+ F + +I ++ Sbjct: 205 GIRDNDHSAEILGISLYAYKLKSFAISAAYCGAAGSLWAYFFPAILPEDFSLNLSITLVV 264 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +I GGM T +++ + E+ ++ + + F+ + + + L Sbjct: 265 CLIAGGMGRTLGPVFGTLLILLIPEMLKIVSGWATGGDGRALIHFSSIRDIVFGLIIILF 324 Query: 332 ILMRSHSLLR 341 ++ L+ Sbjct: 325 LIFEPMGLVS 334 >gi|146339660|ref|YP_001204708.1| branched chain amino acid ABC transporter ATP-binding protein [Bradyrhizobium sp. ORS278] gi|146192466|emb|CAL76471.1| putative Branched-chain amino acid ABC tranpsorter, ATP binding protein [Bradyrhizobium sp. ORS278] Length = 583 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 90/310 (29%), Gaps = 29/310 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y+ ++ ++ + A + I+ G G L+ + IGAY+ I+ + YG Sbjct: 19 PLLLDTYLVNILVRACFVAIAAITVDIMWGYCGTLTFGQSAFFGIGAYALAIMFTEYGFG 78 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 W + + + + I++ + G Sbjct: 79 TWQIFAAIGAAVAVAAAVAAFTGWLSFYPGSTPLYASVISLVVPIVLVQILYSGGT---- 134 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 SF + + +A + L + R+ Sbjct: 135 -----------FTGSSSGLVGFESFDLEIETWLRLAGLGLLATAVLALVVMRSDTGRLLS 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RDN L ++ + + +AG F+A +P+ F+ ++ Sbjct: 184 ALRDNDARCTYLGIDTSRLRIVVLVLCAIVSALAGFFYAGFGAVAAPENASFTFGTNLVI 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V LGG ++ + Y + ++ +AL V Sbjct: 244 MVALGGRGTVIGPVIGALCIEVASAYLANSLPYVWE--------------LIVGVALIAV 289 Query: 332 ILMRSHSLLR 341 IL+ LL Sbjct: 290 ILVFPDGLLG 299 >gi|91789684|ref|YP_550636.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91698909|gb|ABE45738.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 349 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 17/324 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L L L + +Y + + I + GL+I+ G GL+SL +GA Sbjct: 24 VWMGVLALTLCAFPFVASEYWLYLACLVAINIASTSGLNILTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL R+GL + ++ G+++GLPSL+ +G YLAIAT+ I I Sbjct: 84 YTVAILQIRFGLPFVGNLLAGGCVAMLAGVLVGLPSLRVKGLYLAIATIAAGVIAHFIFS 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + +T G +G+ V RF + +Y+V++ + L Sbjct: 144 HFSSLTGGSSGLTVPPA---------------RFFGIELDNSFKLYWVIVPVMGLMLLGA 188 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L RT I A+ IRD + L +++ KL +FA+SS + G+AG FA +SP Sbjct: 189 VNLFRTRIGRAFIAIRDRDISAEVLGISLLRYKLLSFAISSFYAGVAGGLFAYFFRAVSP 248 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK--FDCSF 316 + F +I ++ VI+GGM S+ + V EL + + + Sbjct: 249 ESFPLLMSIFFLAAVIVGGMGSILGSILGAVFMTLVPELLKLIVGWLPLASFGGNAALIL 308 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 + T + + + L ++ H L Sbjct: 309 SPVRTIVFGLMIVLFLIFEPHGLA 332 >gi|332284757|ref|YP_004416668.1| putative branched-chain amino acid transport system protein [Pusillimonas sp. T7-7] gi|330428710|gb|AEC20044.1| putative branched-chain amino acid transport system protein [Pusillimonas sp. T7-7] Length = 612 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 117/323 (36%), Gaps = 22/323 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ + L + +ILI+ +F G ++ G GLLS Y G + Sbjct: 18 MIVGICLLAAPFVLPHLGMSADLLTRILIWGLFGLGFDLLFGYTGLLSFGQSAFYGTGGF 77 Query: 80 SYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 +L + + L + +I+ G+ +G +L+ G Y A++TL E+F + Sbjct: 78 VAAYLLTAGIVPHMLLALLCGVVIAALAGLAIGYLTLRRTGIYFAMSTLAFGEMFYFLEN 137 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G + ++ +P MY+ + F+ + Sbjct: 138 SLFKEYTGGENGIAGVPPPEIALGFTTINISSGWP---------MYWFVAVFFFIGYLVA 188 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + R+ + IR N K +L +I KL+ F +++A+ G+AG + + P Sbjct: 189 RRIVRSPFGAVLKAIRGNPKRAMALGHSIQGYKLTVFVIAAAYGGLAGGLLGVFQSYMPP 248 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 D F + ++ ++GG +L I + + E + + Sbjct: 249 DAFSLDTSAQLVIQTVMGGAGTLLGPLLGATIWLYLYEGLQQVA------------NIGA 296 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 ++ I +++ + H + Sbjct: 297 YWKLILGIVFVVLVTVFRHGVAG 319 >gi|213691482|ref|YP_002322068.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522943|gb|ACJ51690.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457555|dbj|BAJ68176.1| branched-chain amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 360 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 69/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + ++ + + YI + + I ++ L++ +G LG L+L C A Sbjct: 16 FIGVLAAFGVVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75 Query: 76 IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 IGAY + + + +++ G+++G+P+L+ GDYLAI T Sbjct: 76 IGAYVAALASKYMVAAGIGIDPTTRFLITTLLGGIVACVFGILIGIPALRLHGDYLAIIT 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ K L + + I YV Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIDRTANLYV 177 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++ ++ R+ A + IRD++ A + + K+ FA+S+ F G+AG Sbjct: 178 VFWIMVVTVVVLFMFSRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 237 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA ++P M + +I + +V+ GGM SL+ + L + EL Y Sbjct: 238 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 295 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L LV++ R + S Sbjct: 296 -------------RMLAYSVVLVLVMIFRPQGIFGSWELSL 323 >gi|171912705|ref|ZP_02928175.1| putative branched chain amino acid ABC transporter, permease protein [Verrucomicrobium spinosum DSM 4136] Length = 325 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 111/306 (36%), Gaps = 22/306 (7%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ + + I ++ A L++V G G SL +GAY + G S+ Sbjct: 31 DAYVLQIMLIAGINIILAVSLNLVNGHTGQFSLGHAGFMGVGAYMAAAVSVEMGPSL--- 87 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 ++ + + L A ++ ++ + G R Sbjct: 88 --MNLLGGPGPAPHAVTFIISLLVGGLCAAACGWMVGVPSLRLRGDYLAIVTLGFNEIIR 145 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + F T S F I + ++ + G+ + ++ + + + +RD Sbjct: 146 VIFQNT--ASNGPFGGALGMRGIPDYTTFFWVFGIAAICIYVVASMVNSTYGRGFLAVRD 203 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A S+ + K+ AF + + F G+AG +A I P F F +++ +I +VIL Sbjct: 204 DEVASESMGVNTVRYKVVAFVLGAFFAGLAGGLYAHLFGAIDPKGFGFLKSVDIIIMVIL 263 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S + A L + E Y + I L +++++R Sbjct: 264 GGMGSTLGVVVAAIGLTVLNEQLRDAEKY---------------RMIVFSILLIIMMIVR 308 Query: 336 SHSLLR 341 LL Sbjct: 309 PQGLLP 314 >gi|270308215|ref|YP_003330273.1| ABC-type branched-chain amino acid transport system, permease component [Dehalococcoides sp. VS] gi|270154107|gb|ACZ61945.1| ABC-type branched-chain amino acid transport system, permease component [Dehalococcoides sp. VS] Length = 350 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 76/323 (23%), Positives = 143/323 (44%), Gaps = 16/323 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ L+ LF Y + I I ++ A GL+I++G G LS+ A+GA Sbjct: 26 AMLIGFLILLFSLPFNISSYWLGIMNLIGITIVAAAGLNILMGYCGQLSVGHAGFIAVGA 85 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL S+ G+ + S +++G GM+ GLPSL+ +G YLAI+T+ I ++ Sbjct: 86 YTTAILASKLGVPFPFDMIASGIMAGLVGMLFGLPSLRVKGFYLAISTIAAQFIIIWVIN 145 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI + + + Y++++ + L+ + Sbjct: 146 HWSSLTGGFNGIVIPP---------------INLFNFDFTTQGSQYFIIMLVAVLAIFFM 190 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + RT I A+ IRDN A + + KL AF + G+AG+ A ++ Sbjct: 191 KNIARTRIGRAFVAIRDNDLAAEVMGINVFKYKLLAFFIGCFLAGVAGSLMAHWIGYLTA 250 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F S++I+ + IVI+GG+ + T + + + ++ ++ + F Sbjct: 251 ENFTLSDSILYVGIVIIGGLGTGVGPIFGTLFIRLLQQGVQYVSPLMGSAFPQLPSGFAA 310 Query: 319 -RHTTLMVIALFLVILMRSHSLL 340 + +A+ L +++ L Sbjct: 311 GLGPMVFGLAIVLFLVLEPRGLA 333 >gi|127513536|ref|YP_001094733.1| inner-membrane translocator [Shewanella loihica PV-4] gi|126638831|gb|ABO24474.1| inner-membrane translocator [Shewanella loihica PV-4] Length = 357 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 131/326 (40%), Gaps = 19/326 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V ++ Y ++ IQI + A GL+I+VG G +SL + GA Sbjct: 30 LVTCLVIALACAAPLVLDGYFLTLFIQISYLGIAALGLNILVGFTGQISLGHGAFFGFGA 89 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 ++ L + + + + IP++ ++ GM+ G+P+ + +G YLAIATL I Q+ Sbjct: 90 FASAWLNTSFNIPVVFCIPLAGFLTMGVGMMFGMPAARIKGLYLAIATLAAQFIIQDFFG 149 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + + G +G A F + Y++ L Sbjct: 150 RAEWFSGGSSGAMAAPVSLFGFDFDTDM---------------SFYFIALFALVFMYIWG 194 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ A+ +RD+ + + + +L +F +SS + G+ GA +A +S Sbjct: 195 CNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFYAGIGGALYAHYLGYVSS 254 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDC 314 + F +I +++VI+GG+ S+ ++ + E+ GM + +L Sbjct: 255 EGFTILMSIQFLAMVIIGGLGSIKGTLMGVVFMVLLPEVLEGMVGLMKYTDYGNLPMVTD 314 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLL 340 + + + L ++ L Sbjct: 315 GLAYIKEMAIGLVIILFLIFEPEGLA 340 >gi|262274115|ref|ZP_06051927.1| urea ABC transporter permease protein UrtB [Grimontia hollisae CIP 101886] gi|262221925|gb|EEY73238.1| urea ABC transporter permease protein UrtB [Grimontia hollisae CIP 101886] Length = 549 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 100/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ GL+I G +G++++ +GAY+ +L + + + +S Sbjct: 263 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMLGAYTTYVLQQLFPAQTGMALLLSIPC 322 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G+ + +L L + +L + + + + Sbjct: 323 AFMVSGLVGMAIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 376 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + Y+++ + S++ L+RT + R + N+ + Sbjct: 377 TPDFMSGMIEVTPMLALTASRMYIIVFCLVVFFSLLFILKRTPLGLQVRAVSQNRAMARA 436 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + ++ F + S G+AG + + + I +V+ GG+ +L Sbjct: 437 MGVRSEWVDMATFGLGSGIAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 494 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L ++ L+++ + L I R L Sbjct: 495 GTLAAGLSLGVFNKVLEPWAGAVLAK-------------ILVLVFIILFIQKRPKGLFPQ 541 Query: 343 RTPSNF 348 R Sbjct: 542 RGRMAE 547 >gi|260495471|ref|ZP_05815597.1| inner-membrane translocator ABC transporter [Fusobacterium sp. 3_1_33] gi|260197008|gb|EEW94529.1| inner-membrane translocator ABC transporter [Fusobacterium sp. 3_1_33] Length = 324 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 141/340 (41%), Gaps = 45/340 (13%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I +L +V +LF + + +Y + I ILI ++ A L+I VG LG ++L Sbjct: 9 YIITYVLLIVLYFILFSLISSGFISRYQVGILILILINIILAASLNITVGCLGQITLGHA 68 Query: 72 IAYAIGAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +IGAY+ +L + + + +++G G I+G+P+L+ GDYLAI TL Sbjct: 69 GFMSIGAYTAALLTKSGFLSGYQGYIVALIIGGLVAGVIGFIIGIPALRLTGDYLAIITL 128 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + +LI++ T G G+ R+ ++ Sbjct: 129 AFGEIIR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LI 162 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + S + + + A IR+++ A + + K AF +S+ F G+AG Sbjct: 163 YVITIFSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGG 222 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + + F ++ +I ++ +V+LGGM S + + +L + E+ Y Sbjct: 223 IYAHNLGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAVVLTILPEVLRSFAEY--- 279 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R LL + Sbjct: 280 ------------RMIVYPLILIIMMLFRPQGLLGRKEFQI 307 >gi|83312690|ref|YP_422954.1| ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magneticum AMB-1] gi|82947531|dbj|BAE52395.1| ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magneticum AMB-1] Length = 358 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 133/324 (41%), Gaps = 18/324 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +L Y+ ++ IQI Y + A GL+I+VG G +SL + GA+ Sbjct: 33 WCIAGILLAAASPLVLSNYLLALLIQIGFYGIAALGLNILVGCTGQISLGHAAFFGFGAF 92 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L + +G+ + L IP++ +++ G++ G+P+ + +G YLAIAT I ++ + Sbjct: 93 ASAWLNNTFGVPVLLAIPLAGVMTTLLGLLFGIPAGRLKGLYLAIATFASQFILEDFFAR 152 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G +G F F+ V+ + +L Sbjct: 153 ANWFTGGSSGAMANPISLFGYEVGGDKGFFYVVLVFVVVMYVLGTNLL------------ 200 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 RT A+ +RD+ + + + ++ +F +SS + G+ GA + +S + Sbjct: 201 ---RTRDGRAFVAVRDHYLSAEVMGINLTKYRILSFGISSFYAGVGGALYGHYLGYVSAE 257 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF---YYFNSLLKFDCSF 316 F +I + ++I+GGM S+ TA ++ + E ++ + + Sbjct: 258 GFTILLSIQFLGMIIIGGMGSVMGTLMGTAFMVLLPEATEAAVSTVKHFTGDIPALTSAL 317 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 + +A+ L ++ L+ Sbjct: 318 AYIKEATIGLAIVLFLIFEPDGLV 341 >gi|89067742|ref|ZP_01155196.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] gi|89046712|gb|EAR52767.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] Length = 651 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 98/311 (31%), Gaps = 26/311 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLI 96 IY + A GL+I G +G++++ +GAY+ + + + SI L + Sbjct: 362 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGFVVQQFVTNHTASILLAV 421 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ ++ A G+ + +++ + + TL+ + L + G + Sbjct: 422 PLAFAVTFAAGVALERLVIRW-LYHRPLETLLATFGVSIALQQLAKNIFGTQARPLTAP- 479 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V + + + RT + R + N Sbjct: 480 --------GWLDGAWVINDVVAISYIRIAIFALALLFLGLFLFIMNRTRLGLETRAVTQN 531 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + S+ + F + S G+AG S + V++G Sbjct: 532 PRMAASMGINPDRVNMLTFGLGSGIAGIAGVVIGLFAKVTSE--MGGDYIVQSFMTVVVG 589 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ ++ G + +N + + F + R Sbjct: 590 GVGNIWGTLAGATMIGGFQKGVEWLNPSNTLAAQTYMIVFIIIFIQF-----------RP 638 Query: 337 HSLLRLRTPSN 347 ++ L+ + Sbjct: 639 RGIIALKGRAA 649 >gi|134101166|ref|YP_001106827.1| amino acid ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133913789|emb|CAM03902.1| amino acid ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 339 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 118/323 (36%), Gaps = 27/323 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L + + +I S+G+ I Y + A + V G G +SL +GAY Sbjct: 1 MLALAALVIAFPSLAPDPFILSVGVVITSYAVLATSWNFVGGFTGYISLGHAAYSGLGAY 60 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L R G W+ + ++ + +G+ SL+ RG I ++ + I + Sbjct: 61 ATGLLIVRAGFDPWVALFAGGVLVALLAVPIGIASLRVRGASFVIVSIALVLITLLVFQS 120 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W T G G+ V RFF ++ + + ++V+ Sbjct: 121 WGDFTGGSDGLRVPRPFGPDVMRPEQHERFFYLHAALLAVALLCWWVI------------ 168 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP- 258 R+ + IR+++ SL KL AF VS+ F +AG +A + P Sbjct: 169 --DRSRFGAGLKAIREDEDKAQSLGVPTFAYKLVAFVVSAFFTALAGGLYALWFGFLDPV 226 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F ++ + +LGG+ SL ++ +E Sbjct: 227 FQFSILAGSYLVLMSLLGGIRSLFGPVLGAVVVGYAMEYFKA------------QYGDTQ 274 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 H M + L +V+L ++ Sbjct: 275 LHLVAMGVLLAVVVLFMPDGIIP 297 >gi|83941690|ref|ZP_00954152.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] gi|83847510|gb|EAP85385.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] Length = 358 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 77/344 (22%), Positives = 145/344 (42%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y L L + + + +++S+ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYLVL------FIAIAVIPFVINDYWVNSLFLPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ + + +S+ + + +S +++ G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKFMTAFPDVSMLVHVLLSGLVTAGVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N A ++ + + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAPERTFFGIEITGPNTQAW---------A 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L SA + L R ++ W IRD A + + AKL+AFAVSS FI Sbjct: 185 TYLFCLMFVIFSAYVARNLTRGSVGRKWMAIRDMDIAAEIIGVNPLRAKLTAFAVSSFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F ++ +V+ ++I+GG+ S+ A L+ + Sbjct: 245 GISGALFFAVYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVALKI 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + +F ++ + + ++ H L +L Sbjct: 305 VGVDWFGWPTDI---VAHLQLVIVGGLIIIFLIAEPHGLAQLWR 345 >gi|262283199|ref|ZP_06060966.1| branched-chain amino acid permease [Streptococcus sp. 2_1_36FAA] gi|262261451|gb|EEY80150.1| branched-chain amino acid permease [Streptococcus sp. 2_1_36FAA] Length = 317 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 78/340 (22%), Positives = 141/340 (41%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L + +L+ + G + + +I I ++ A GL+++VG G SL Sbjct: 6 KVNLLWLALILAGFVLITVLAGGGILNAFHLQILEEIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G+ + + + + A I+G + +G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVAIIGTKSPTYPAFFAAMILGAFIAGLVALGVGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +++ +TNG AGI + Sbjct: 126 GVSEIIRILIVNGGEVTNGAAGILSIPGFTSWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ L R+ + ++R+++ A S+ AK+ AF + +AGA Sbjct: 161 YFFVVITTLFTLNFLRSPLGRKTLSVREDEIAAESVGVNTTKAKVVAFVFGAITASIAGA 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I V+ IV+ GG+ S++ A +L + L Sbjct: 221 LKAGFIGAVVPKDYSFTNTINVLIIVVFGGLGSMTGTIIAAIVLGVLNMLLQ-------- 272 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F+ + +AL LV++ R LL Sbjct: 273 -------EFSSIRMIIYSLALILVMIFRPGGLLGTWELQL 305 >gi|297528882|ref|YP_003670157.1| inner-membrane translocator [Geobacillus sp. C56-T3] gi|297252134|gb|ADI25580.1| inner-membrane translocator [Geobacillus sp. C56-T3] Length = 324 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 140/344 (40%), Gaps = 42/344 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + + +LA + ++ + + + + + I VM A L +++G G Sbjct: 5 KRTRGFWVSVILAFAFFAVVEWLIASGTLNVFYVNTLFFMAINVMLAASLHLIIGITGQF 64 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S+ +A+GAY+ ++ + L + + + + + G+I+G+PSL+ +GDYLAIAT Sbjct: 65 SIGHAGFFAVGAYASAVMTMKLELPFAVGVLTAGIAAMLAGLIIGVPSLRLKGDYLAIAT 124 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + L+ + + + + Sbjct: 125 LGFGEIVRIALLNIDYVGGAS---------------------------GMTVTHMTTWPW 157 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + F++ +I + A +IR+++ A ++ + K++AFA+ S F G+AG Sbjct: 158 VFACLFVTILVIANFTNSTHGRACISIREDEIAADAMGINTTYYKVAAFAIGSFFAGIAG 217 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A +A I P F F ++ ++ V+LGG+ SLS A +L V Sbjct: 218 ALYAHHFYIIQPSNFGFLKSFDILIFVVLGGLGSLSGAVMAAVLLTIVSTFLQNY----- 272 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + I L LV+L R L+ + S+ + Sbjct: 273 ----------PETRMIIYSIVLILVMLYRPTGLMGTKELSSLFK 306 >gi|71905894|ref|YP_283481.1| inner-membrane translocator [Dechloromonas aromatica RCB] gi|71845515|gb|AAZ45011.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Dechloromonas aromatica RCB] Length = 358 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 75/345 (21%), Positives = 147/345 (42%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +F +R ++ + + ++ FL + S+ + ++ I LI+ + A GL+I+ G Sbjct: 18 QLFPIRQDR------IGVITLLVVAFLGVPFFASEYWFSAILIPFLIFALAALGLNILTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GAY+ R L+ ++ + + G++ GLPSL+ +G Sbjct: 72 YAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPILVSFALAGLTAAGVGILFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL L K+ ++N + ++ + + Sbjct: 132 YLAVATLAAQFFIVWCLTKFPWLSNNSSSGVISTQQLIFFGHE-------------LKTP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y ++L + + A + R+ AW +RD A + ++ KL AFAVSS Sbjct: 179 VEKYLLVLSIVVVMALAAKNMVRSTTGRAWMAVRDMDVAASVIGIKLMPTKLLAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 + G+AGA +A + PD F + ++ ++I+GG+ S+ A ++ + Sbjct: 239 YCGVAGAMYAFCYLGSVEPDGFSLEMSFKILFMIIIGGVGSIMGSFLGAAFILLLPIFLD 298 Query: 300 GMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ L + + T+ + +++ H L RL Sbjct: 299 IALPFFADLFGLPFSSATVSHIQITVFGALIMFFLIVEPHGLARL 343 >gi|196249268|ref|ZP_03147966.1| inner-membrane translocator [Geobacillus sp. G11MC16] gi|196211025|gb|EDY05786.1| inner-membrane translocator [Geobacillus sp. G11MC16] Length = 324 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 69/344 (20%), Positives = 141/344 (40%), Gaps = 42/344 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + + +LA + ++ + + + + + I V+ A L +++G G Sbjct: 5 KRTRGFWVSIILAFAFFAVVQWLITSGTLNIFYVNTLFFMAINVILAASLHLIIGITGQF 64 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S+ +A+GAY+ I+ + L + + V+ + + G+I+G+PSL+ +GDYLAIAT Sbjct: 65 SIGHAGFFAVGAYASAIMTMKLQLPFAVGVLVAGVAAMLAGLIIGVPSLRLKGDYLAIAT 124 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + +L+ + + + + Sbjct: 125 LGFGEIVRIVLLNIDYVGGAS---------------------------GMTVTHMTTWPW 157 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + ++ +I + A +IR+++ A ++ + K++AFA+ S F G+AG Sbjct: 158 VFACLLITIIVIANFTNSTHGRACISIREDEIAADAMGINTTYYKVAAFAIGSFFAGIAG 217 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A +A I P F F ++ ++ V+LGG+ SLS + +L V Sbjct: 218 ALYAHHFYIIQPSNFGFLKSFDILIFVVLGGLGSLSGATISAVLLTIVSTFLQNY----- 272 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L V+L R L+ + ++ L+ Sbjct: 273 ----------PETRMIIYSLVLIFVMLYRPTGLMGKKELTSLLK 306 >gi|212636244|ref|YP_002312769.1| branched-chain amino acid AbC transporter permease [Shewanella piezotolerans WP3] gi|212557728|gb|ACJ30182.1| Branched-chain amino acid ABC transporter, permease protein, putative [Shewanella piezotolerans WP3] Length = 357 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 131/326 (40%), Gaps = 19/326 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L+ Y ++ IQI + A GL+I+VG G +SL + GA Sbjct: 30 LMTIALIAIACGAPLVLDGYFLTLFIQISYLGIAALGLNILVGFTGQISLGHGAFFGFGA 89 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 ++ L + + + + L IP++ ++ A GM+ G+P+ + +G YLAIATL I ++ Sbjct: 90 FASAWLNTSFQIPVVLCIPLAGFLTMAVGMMFGMPAARIKGLYLAIATLAAQFIIEDFFA 149 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + + G +G A F YY+ L Sbjct: 150 RAEWFSGGSSGSMAAPVNLFGFDFDTDQ---------------SFYYIALFALVFMYIWG 194 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ A+ +RD+ + + + +L +F +SS + G+ GA +A +S Sbjct: 195 CNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFYAGIGGALYAHYLGYVSA 254 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDC 314 + F +I +++VI+GG+ S+ ++ + E+ + + ++ Sbjct: 255 EGFTILMSIQFLAMVIIGGLGSIKGTLMGVVFMVLLPEMLESIVALMKYTDWGNIPMVTD 314 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLL 340 + + + L ++ L Sbjct: 315 GLAYIKEMAIGLVIILFLIFEPEGLA 340 >gi|110347274|ref|YP_666091.1| inner-membrane translocator [Mesorhizobium sp. BNC1] gi|110287450|gb|ABG65508.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Chelativorans sp. BNC1] Length = 291 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 132/305 (43%), Gaps = 22/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y ++ I ++ A L++++G G+ S+ Y +GAY +L Y + L + Sbjct: 3 NYFANLVTVTGISMILAISLNLLIGYAGIFSMAHAAFYGVGAYVAALLALHYTAELTLAV 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ + A +++ LP+L+ RG+Y A+L + I + +W +T G +G+ Sbjct: 63 PLAMVTCAAASLLISLPALRVRGEYFVAASLGLQVIAFTVFEQWHSVTGGLSGLIGIPVA 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G ++ S + F + V LL RTA R IRD+ Sbjct: 123 ELFGYSLASPLAFMGVTIALVALVALAVICLL--------------RTAFGRDLRAIRDD 168 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + K A A+SSA +AG +A + ++P+ F + +++V+++VI+G Sbjct: 169 ETAAAAAGKNVAVIKSIAVAISSALCAVAGVLYAFNIAFVNPESFTLNLSVLVMAMVIIG 228 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G +++ A++ + + + L +A+ L+++ R Sbjct: 229 GAGTITGPIIGAALIQCLPAALSWLPLP--------PQNIGYLQQILYGLAMVLLMIYRP 280 Query: 337 HSLLR 341 L+ Sbjct: 281 AGLMG 285 >gi|167770772|ref|ZP_02442825.1| hypothetical protein ANACOL_02118 [Anaerotruncus colihominis DSM 17241] gi|167667367|gb|EDS11497.1| hypothetical protein ANACOL_02118 [Anaerotruncus colihominis DSM 17241] Length = 385 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 125/358 (34%), Gaps = 15/358 (4%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 ++ + +L + +LLF+ G Q + S+ + I + A ++++ G Sbjct: 1 MHMKKSTKRICSLVLIALAVVLLFILDGHKNEQGMLISILQKSAILAIVAVAMNLLNGFT 60 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI----------SGACGMIMGLP 113 GL SL +IGAY IL + +G + P Sbjct: 61 GLFSLGQAGFMSIGAYVTAILMIPVASLDGVYYMNGVAPGIRSMKEAMEAGPAWLQAAYP 120 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR----F 169 L L A + +K + G R F + ++ Sbjct: 121 FLALIAGGLIAAAFAALIGIPVLRLKSDYLAIATLGFSEIIRAVFSSPQMDTITNGSYGL 180 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + P+ ++ + + + + + ++++ L + A++ IR+++ A ++ + Sbjct: 181 NKVPTFPKLFGLPVLFTPFIIAAVCIALMVLLINSTYGRAFKAIREDEIAAEAMGVNLFK 240 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 K +F +SS F ++G A I F + ++ IV++GG+ S++ + Sbjct: 241 HKQLSFVISSFFTAISGGLLAMFMRSIEAKTFSITLTYDILLIVVIGGIGSVTGSVLSAF 300 Query: 290 ILIGVVE-LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 ++ E + + + + L +V+L L+ + S Sbjct: 301 LVTASKEWWLRFFDQPLIIGGWEISLFRTGFRMVVFSVLLMVVVLFYRRGLMGDKEFS 358 >gi|115523713|ref|YP_780624.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115517660|gb|ABJ05644.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 326 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 133/327 (40%), Gaps = 24/327 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ L + Y+ ++ I L+Y + +I+ G G +SL + + + Sbjct: 13 LITAAVLACLAASVPMFVKDVYVQNIMILTLMYAALSQAWNILGGYCGQISLGHALYFGL 72 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L +++G+ W + +IS M +G P+ + +G Y IAT++++EI + Sbjct: 73 GAYTTALLFTKFGVLPWFGMLGGGVISALIAMALGYPTFRLKGHYFVIATIVIAEIGLLL 132 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 W + + F ++ +Y L C ++ Sbjct: 133 FHNWDW-------------AGAALGIDIPMRQDSWANFQFPRSKLPYFYFALAFCCVAWF 179 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + WL + WR ++DN +A SL + +K+ A AVS+ + G+F+A I Sbjct: 180 VTWWLENSKWGFWWRAVKDNPEAAESLGVVVFNSKMGAAAVSAFLTAVGGSFYAMFVSYI 239 Query: 257 SPDMFKFSENIIVISI-VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P+ + +++++ +LGG+ +L AILI + EL + Sbjct: 240 DPESVMAFQFSLLMALPAVLGGIGTLWGPVLGAAILIPLTELTRSFIGGSGRGV------ 293 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L+ L R L+ L Sbjct: 294 ----DLIVYGTVIMLIALARPQGLIGL 316 >gi|260430946|ref|ZP_05784917.1| branched-chain amino acid ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] gi|260414774|gb|EEX08033.1| branched-chain amino acid ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] Length = 401 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 66/369 (17%), Positives = 132/369 (35%), Gaps = 36/369 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYID-------SMGIQILIYVMFAWGLSIVV 60 LNK D L ++ + LL L S + + + +I+ +FA G +I+ Sbjct: 4 LNKKDTSLLIVVAILTLLAPFILNPFPSDSAMAQFNAGYPDLMQRFVIFGIFAIGFNILF 63 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G LS +G+YS V + ++ I +S +++G +++G SL+ G Sbjct: 64 GLTGYLSFGHAAFLGVGSYSAVWMFKLLSYNVIPAIALSVVVAGLFSVLIGYISLRRSGI 123 Query: 121 YLAIATLIMSEIFQNILIKW-----KPITNGKAGIYVAD-----------RLYFLGTTVR 164 Y +I TL +++ + +TNG+ G+ V + Sbjct: 124 YFSILTLAFAQMSFALAYSVLSNPKFNLTNGETGLQVYADDPQILQGANAPDLPHLFGLP 183 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + ++ YY+ + + + + + R+ R ++ NQ+ Sbjct: 184 MRATYTMDVGAWSFDFNAGYYLCAVIMMVVFYLAIRIFRSPFGMMLRAVKSNQQRMNYTG 243 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 L+AF +S + G+AG AA + +++ + V+ + ILGG +L Sbjct: 244 LNSKPYTLAAFVISGMYAGLAGGLMAAMDPLAGAERMQWTASGEVVLMTILGGTGTLIGP 303 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLV 331 + + +N +S F + I LV Sbjct: 304 VLGAGFIKYFENIFSKINDNVLHSWFAFLPDGLEDAVVFIIHPFIGKGWHLTLGILFMLV 363 Query: 332 ILMRSHSLL 340 ++ L+ Sbjct: 364 VIYLPGGLV 372 >gi|39936358|ref|NP_948634.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] gi|39650213|emb|CAE28736.1| possible branched-chain amino acid ABC transporter, permease protein [Rhodopseudomonas palustris CGA009] Length = 407 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 128/349 (36%), Gaps = 14/349 (4%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ + LL ++ + T + + IY +FA G +I+ G G Sbjct: 1 MKHTSKLADIALLIGFAIVVALGPIIFTPIGAGYPDLLQKFAIYGIFAIGFNILFGLTGY 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LS +G+Y+ V + + + +S +++G + +G SL+ G Y +I Sbjct: 61 LSFGHAAFLGVGSYAAVWSFKLLSMDLLPAVAMSVVLAGLLALAIGFVSLRRSGIYFSIL 120 Query: 126 TLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL +++ N+ PITNG+ G+ V + + I + Sbjct: 121 TLAFAQMCYNMAYSVLTPITNGETGLRVLRQDPRYLDAAIGYVSPTPSLFGMQITGWTGF 180 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y+ + + + + + R+ R I+ NQ + LSAF +S F G+ Sbjct: 181 YICGAVLVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYSTRPYLLSAFVISGMFAGL 240 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA AA+ + +++ + V+ + ILGG +L T I+ + N Sbjct: 241 AGALLAATDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVLGTGIIKYFENIFSAYNEA 300 Query: 305 YFNSLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340 ++ F + + V++ ++ Sbjct: 301 QLKAMFTFVPDGLREPVVKTLGLFVGEGWQLTLGLLFMAVVIFLPGGVM 349 >gi|256026673|ref|ZP_05440507.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. D11] gi|289764670|ref|ZP_06524048.1| branched-chain amino acid transport system permease livM [Fusobacterium sp. D11] gi|289716225|gb|EFD80237.1| branched-chain amino acid transport system permease livM [Fusobacterium sp. D11] Length = 324 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 76/340 (22%), Positives = 141/340 (41%), Gaps = 45/340 (13%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I +L +V +LF + + +Y + I ILI V+ A L+I VG LG ++L Sbjct: 9 YIITYVLLIVLYFILFSLISSGFISRYQVGILILILINVILAASLNITVGCLGQITLGHA 68 Query: 72 IAYAIGAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +IGAY+ +L + + + +++G G I+G+P+L+ GDYLAI TL Sbjct: 69 GFMSIGAYTAALLTKSGFLSGYPGYIVALIIGGLVAGVIGFIIGIPALRLTGDYLAIITL 128 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + +LI++ T G G+ R+ ++ Sbjct: 129 AFGEIIR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LI 162 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + S + + + A IR+++ A + + K AF +S+ F G+AG Sbjct: 163 YVITIFSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGG 222 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + + F ++ +I ++ +V+LGGM S + + +L + E+ Y Sbjct: 223 IYAHNLGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAVVLTILPEVLRSFAEY--- 279 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R LL + Sbjct: 280 ------------RMIVYPLILIIMMLFRPQGLLGRKEFQI 307 >gi|326804267|ref|YP_004322085.1| branched-chain amino acid ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651704|gb|AEA01887.1| branched-chain amino acid ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 335 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 76/345 (22%), Positives = 138/345 (40%), Gaps = 43/345 (12%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F+ K + V+ +L+ A Y ++ + I I ++ + GL++VVG Sbjct: 9 FNQFFTKTTLAWIAVIVLGFVLMAASYMAGLVSAYTQNIIMNIAINIILSVGLNLVVGYA 68 Query: 64 GLLSLNCVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G SL AIGAY I+ + ++ +I+G+P+L+ RGDY Sbjct: 69 GQFSLGHAGFMAIGAYVGAIVSQEIPGQAGFLAGLLAGMAVTAVVALIVGIPTLRLRGDY 128 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAIATL +SEI + ++ + ITNG AGI R Sbjct: 129 LAIATLGVSEIIRITIMNLE-ITNGAAGISGVPRH------------------------- 162 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + + ++ +++ ++ A +R+++ A S+ K AF + + Sbjct: 163 VTWITMYVFVVITTLLVVNYIYSSPGRATIAVREDEIAAESVGIHTTTYKTLAFVIGAVT 222 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 +AG +A+ I+P F F ++I ++ IV+ GG+ S+S A+ +L + Sbjct: 223 ASIAGTLYASYFGVINPSQFTFQKSIDILVIVVFGGIGSISGSFVASILLGLLNTFLA-- 280 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 F L AL L+++ + L+ Sbjct: 281 -------------PFGQVRPILYAAALILIMIFKPSGLMGEYEFQ 312 >gi|283797882|ref|ZP_06347035.1| high-affinity branched-chain amino acid transport protein [Clostridium sp. M62/1] gi|291074572|gb|EFE11936.1| high-affinity branched-chain amino acid transport protein [Clostridium sp. M62/1] Length = 369 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 137/339 (40%), Gaps = 31/339 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + + + +L+ + + + + + YV+ A L++ VG LG LSL Sbjct: 17 NAVTYGIVLACFILVQILTATGGMTSLLKGILVPLCTYVILAVSLNLTVGILGELSLGHA 76 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG--------------MIMGLPSLKF 117 +GA+S + + + I G +++G+P L+ Sbjct: 77 GFMCVGAFSGAFFTNAMMKTFGIAKNDDMAILGLFIVAIVIGAAVAAVFGILIGIPVLRL 136 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 +GDYLAI TL EI +N++ + + + L + Sbjct: 137 KGDYLAIVTLAFGEIIKNLINALFVGIDSRGIHFSLKDAASLNLEEGGEVIIKGAQGISG 196 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + + + + + L+ I+ L + A IRDN+ A S+ I KL AF+V Sbjct: 197 TPKAATFTIGIILVLLTLFIVQNLIHSRTGRAIMAIRDNRIAAESVGINITKYKLLAFSV 256 Query: 238 SSAFIGMAGAFFAASRDR--ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 S+A G+AG +A + +P F ++ +I+++ V+LGG+ ++ A IL + Sbjct: 257 SAALAGVAGVLYAHNLATLAATPKAFGYNMSIMILVFVVLGGIGNIRGSIIAAVILTLLP 316 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 EL G++ Y + I L +++L+ Sbjct: 317 ELLRGLSSY---------------RMLIYAIVLIVMMLL 340 >gi|146338135|ref|YP_001203183.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146190941|emb|CAL74946.1| Putative Branched-chain amino acid ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 520 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 91/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ L S +I+ ++ Sbjct: 241 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEVIRTRYPALFDYSLLIAAPLAFLVA 300 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 I + + +L W + + A S Sbjct: 301 GAIGVLIER--TIIRFLYGRPLETLLATWGLSLILQQAVRSAFGPTNREVGNPSW-MSGA 357 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++L + A ++ LR TA+ R + N++ S+ Sbjct: 358 FELGQITITYNRLWILCFTMAVFAILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 417 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 418 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFTL 475 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + +++ + L I R L L+ + Sbjct: 476 GIANKFLEPVAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAVE 519 >gi|117924327|ref|YP_864944.1| inner-membrane translocator [Magnetococcus sp. MC-1] gi|117608083|gb|ABK43538.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Magnetococcus sp. MC-1] Length = 548 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 101/306 (33%), Gaps = 17/306 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ A GL+I G +G++++ +GAY+ ++ + + + S ++ Sbjct: 259 ISLGSVLLLAAVGLAITFGVMGVINMAHGELVMLGAYTTFVVQDLFRAYLPDWLDWSLLV 318 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++ I + + +L W + + + Sbjct: 319 AVPMAFLVSGLFGVAIER--GIIRFLYGRPLETLLATWGLSLMLQQLVRTLFGPTNQEVS 376 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 S + S ++ ++L + S+ L LR+T++ R + N++ S Sbjct: 377 NPSWMSGAIQTSQGLVLTYNRITIILFSLAVIGSLALVLRKTSLGLQMRAVTQNRRMAGS 436 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + + G+AG + + S I +V+ GG+ +L Sbjct: 437 MGIRTGWVDALTFGLGAGIAGIAGVALSQVDNV--SPNLGQSYIIDSFMVVVFGGVGNLW 494 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L + + + L+++ + L I R L L Sbjct: 495 GTLVGAFSLGVLNKFMEPLAGAVLGK-------------ILVLVGIILFIQKRPRGLFAL 541 Query: 343 RTPSNF 348 + + Sbjct: 542 KGRAVE 547 >gi|319763584|ref|YP_004127521.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330824150|ref|YP_004387453.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317118145|gb|ADV00634.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329309522|gb|AEB83937.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 324 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 126/324 (38%), Gaps = 28/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L L Y ++ I+ + GL+++ G G L+L A G Sbjct: 9 AGWGLLLAASLAFPWVAGNDYHLTVMSTAYIFAIATLGLNLITGYTGQLNLAHAGFMAAG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL +G W + +S ++ G ++G+ SL+ +G Y +I TL + I ++ Sbjct: 69 AYTVGILTVDHGWPFWGSLVMSGVVCMVLGYLIGVVSLRLKGHYFSIFTLCVGYIMFLVI 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G GI + + +YY++L LS Sbjct: 129 EKWEGLTHGTVGIMGIPAPE-------------AIGALSFESPLALYYLVLAFLVLSVWA 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + ++ + + IR++ + +L ++ K+ AF +S + G+AG +A I Sbjct: 176 MQRIVKSLLGRTFIAIRNSDELAEALGINLMRNKVLAFMLSVVYAGVAGGLYAGFVRFIG 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PDM ++ + GG+ ++ + + + + + Y Sbjct: 236 PDMAGVHHTFDMMIFAMAGGLGTVLGPLLGSIGMPWLTQYLQFLQEY------------- 282 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + L ++++ + ++ Sbjct: 283 --RFIVFGPILVMLVIFMPYGVVG 304 >gi|167772555|ref|ZP_02444608.1| hypothetical protein ANACOL_03933 [Anaerotruncus colihominis DSM 17241] gi|167665033|gb|EDS09163.1| hypothetical protein ANACOL_03933 [Anaerotruncus colihominis DSM 17241] Length = 324 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 68/325 (20%), Positives = 137/325 (42%), Gaps = 29/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A+ L+ + + Y+ + Q L+ ++ GL+ + G G ++L +G Sbjct: 7 AALCLLLIFLVVFPLSYDNAYVHILLSQTLVNIVIVMGLNFITGLTGQMNLGTAGIMGLG 66 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ + +R G+S W+ ++ ++ A G ++G PSL+ +G YL++ T+ SEI + IL Sbjct: 67 AYTAALFSTRLGVSPWIGFLLAIVMGLAIGWMLGYPSLRLKGVYLSLTTIGFSEIVRLIL 126 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 W +T G G+ + G + + + +YY+ L L A Sbjct: 127 TNWVELTGGTMGVQGIPHISLFGYALDTSRK--------------VYYLYLAAVVLLAFT 172 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + ++ IRDN +A + I K+ AF +++ F + GA +A ++ Sbjct: 173 AWRIVHSKWGRVFKAIRDNVEAVEACGIDIAKIKIQAFTLATVFGCLGGAMYAYLMGYLN 232 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + + ++++GG+ S+ TA++ + E + Y+ Sbjct: 233 PTTFTTDLSANYLIMMMIGGIGSVPGNILGTAMITLLPECLRFLGTNYW----------- 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 I L + + L+ L Sbjct: 282 ----LYFSIIALLFAIFLPNGLVSL 302 >gi|154243964|ref|YP_001414922.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154158049|gb|ABS65265.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 344 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 123/327 (37%), Gaps = 19/327 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L+ + + L L + Y+ +L + A + V G +G +SL Sbjct: 5 FTLILGLPLFVAALILPFVVADSYVVHSAAMVLYFAYMASSWNFVCGYVGQVSLGHAAFS 64 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 I Y+ V+L + GLS W+ + + +++ A + +G + + +G Y + ++ +EI + Sbjct: 65 GIAGYASVLLFTGLGLSPWIGMILGGLLAAAISVPVGYATFRLKGPYFTLTSIAFAEIMR 124 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 L L + F + ++ Y+++L M Sbjct: 125 IWLENTDEFLG--------IPLKGAQGLTVPPVGGTSFLAFQFDGKLPYYFIILAMLVGV 176 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + R+ + + IR N+ +L L+A A+S+ G+ GA++A Sbjct: 177 MAATHVMERSRLGFYLKAIRGNRDGAEALGIDPTRYCLTALALSAFLTGLGGAYYAQLFR 236 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I+P+ +I + + I+GG +L +L V E+ M + Sbjct: 237 YINPERNMGIDLSIDMAVMTIVGGQGTLLGPTLGALVLHPVGEMVRAMLGGHVLG----- 291 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340 H + + L L +L ++ Sbjct: 292 -----LHLIIYGVVLMLAVLYFPKGII 313 >gi|257877546|ref|ZP_05657199.1| branched-chain amino acid transport system/permease component [Enterococcus casseliflavus EC20] gi|325568963|ref|ZP_08145256.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Enterococcus casseliflavus ATCC 12755] gi|257811712|gb|EEV40532.1| branched-chain amino acid transport system/permease component [Enterococcus casseliflavus EC20] gi|325158001|gb|EGC70157.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Enterococcus casseliflavus ATCC 12755] Length = 328 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 75/341 (21%), Positives = 144/341 (42%), Gaps = 42/341 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 +Y+ I LA + LF + D++ + I I ++ A L++++G G SL Sbjct: 9 RYNLIWLALAAILYFGLFAAYNGGMINLFSDAIIVNIGINIILAVSLNLIIGFSGQFSLG 68 Query: 70 CVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I + + V ++SGA +++G+P+L+ +GDYLAIATL Sbjct: 69 HAGFMAIGAYAGAILSASNPTFGGFLTGLLVGMLVSGAVALVVGIPTLRLKGDYLAIATL 128 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++EI + +L+ + +TNG AGI+ + ++ Sbjct: 129 GVAEIIRILLVNLRGLTNGPAGIFGLPQFSNWQ-------------------------IV 163 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 LS ++ + A IR+++ A S+ K+ AF + + +AG Sbjct: 164 FLFAVLSILVVSNFIHSGPGRATLAIREDEIAAESMGVNTTKYKVIAFVMGAVMASIAGT 223 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A+ + + P + F ++I V+ IV+ GG+ S + + +L + G Sbjct: 224 LYASYQQSVFPRDYGFMKSIDVLIIVVFGGLGSTTGAVVSAVVLGILNMYLQGF------ 277 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + +AL ++++ + LL S Sbjct: 278 ---------SDLRMIIYALALIIIMIFKPSGLLGTWEFSVK 309 >gi|83310771|ref|YP_421035.1| ABC-type branched-chain amino acid transport system [Magnetospirillum magneticum AMB-1] gi|82945612|dbj|BAE50476.1| ABC-type branched-chain amino acid transport system [Magnetospirillum magneticum AMB-1] Length = 315 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 69/332 (20%), Positives = 130/332 (39%), Gaps = 30/332 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + ++ S Y +G+ + + GL++++G G +SL +A+GAY Sbjct: 11 LAALAIVITLAPLGFSNSYFYDVGVNAMFNAILCVGLNLLIGYAGQISLGHAGFFALGAY 70 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 IL RYG+ + +SA + G ++ P LK +G YLA+ATL + I +L Sbjct: 71 GSGILTERYGVPAIGALVLSASVVGILAFVVARPILKLKGHYLAMATLGIGIIIHIVLKT 130 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 IT G G+ + + T + Y+V + L+ + L Sbjct: 131 EAGITGGPDGMSLGNFKMLGFTIKGDQMW---------------YWVTGVLLVLAVWLSL 175 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + + A R + ++ + K+ F VS+ F + G+ FA I+PD Sbjct: 176 NLIESPVGRALRAVHGSEVGAEVVGVDTSSYKVLVFVVSAVFASVVGSLFAHKNGFITPD 235 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + F ++ ++++V+LGGM S+ IL + ++ + Y Sbjct: 236 ISSFFHSVELVTMVVLGGMASIYGALIGAVILTLLPQVLAAVEQY--------------- 280 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + ++ LL S Sbjct: 281 EAMILGAIMMGTMIFMPKGLLPSLLASLKRRE 312 >gi|86748682|ref|YP_485178.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86571710|gb|ABD06267.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 357 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 66/343 (19%), Positives = 144/343 (41%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF R ++ IL ++ + + Y S+ IQI I+ + A GL+I+VG Sbjct: 21 TIFPTRTSRNAAILGIVLISFA--------PLVLSGYWLSVLIQIGIFGIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +S+ + +GAY+ L + + ++ IP++ +I+ G++ GLP+ + +G Y Sbjct: 73 FTGQISIGHAAFFLLGAYTSAYLNNNLPIPVFFTIPLAGVITALVGLVFGLPAARLKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L IATL I + + + + G F F+ ++ + Sbjct: 133 LVIATLAAQYILIDFFSRAEWFSGGSVPASANPFSLFGYMLRGDKQYFYVVLVYLLVSYL 192 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + L R+ A +RD+ + + + + +F +++ F Sbjct: 193 LVT---------------NLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFF 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA +A + +S + F +I+ ++++I+GG+ S+S TA ++ + E + Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPEAMEWI 297 Query: 302 N----FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + L+ + + + + + ++ L Sbjct: 298 SMELKGGVIDRALQLNNNLTFLREIAIGLIIIAFLVFEPDGLA 340 >gi|27378772|ref|NP_770301.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium japonicum USDA 110] gi|27351921|dbj|BAC48926.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium japonicum USDA 110] Length = 873 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 117/333 (35%), Gaps = 34/333 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A V L+L A S+ QI IY ++ G++++VG GL+ + + + Sbjct: 41 AFVAALVLTALTAAWALLGAPISLITQIAIYTLYGAGVNLLVGYTGLVPFGASVFFGCAS 100 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ + + + ++ + S +++G L+ RG Y ++ TL S+I I Sbjct: 101 YAAAFFILGRYGNDLVSLLLATVFSALLALVVGAIILRRRGLYFSLLTLAFSQIAFEIAF 160 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 KW +T G+ G+ R F G + ++ + + ++ Sbjct: 161 KWTGVTGGENGLQGVYRTSFAGPW-------------------SFHVFVVAVTVICIWLM 201 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + + +RDN++ SL + + A ++ F+G G + + Sbjct: 202 WRIAHSPFGRVLQAVRDNEQRASSLGYNVHRFRHGALILTGTFVGFGGGLLTLMLEGVYA 261 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + + + +LGG+ + I + + + ++ Sbjct: 262 NNLSWQHAGDSLLMTVLGGVHHVLGPLWGAIAFILLEDRLSAITENWW------------ 309 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + L L L + L +R Sbjct: 310 ---LVFAPILMLFALTSPEGMQGLWQRLFGRQR 339 >gi|86358915|ref|YP_470807.1| urea or short-chain amide ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86283017|gb|ABC92080.1| probable urea or short-chain amide ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 538 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 95/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY+ ++ S L S + + Sbjct: 259 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYVVQETIASSFPSLDDYSLAFAVPAAFLFT 318 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 ++ + + +L W + I S Sbjct: 319 GLVGLVIER--SVIRYLYGRPLETLLATWGVSLILQQAIRSYFGPTNREVRNPSW-MSGA 375 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F ++ ++++ + ++++ L+R+A R + N++ S+ + Sbjct: 376 FDLGGLVITWNRLWIIVFSLAVFLTLLMLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 435 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S GMAG A S+ + I +V+ GG+ +L L Sbjct: 436 AFTFALGSGIAGMAGV--ALSQIDNVSPNLGQNYIIDSFMVVVFGGVGNLWGTLVGALSL 493 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 V + L+++ + L I R L L+ + Sbjct: 494 GVVNKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 537 >gi|237745224|ref|ZP_04575705.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. 7_1] gi|229432453|gb|EEO42665.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. 7_1] Length = 324 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 141/340 (41%), Gaps = 45/340 (13%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I +L +V +LF + + +Y + I ILI ++ A L+I VG LG ++L Sbjct: 9 YIITYVLLIVLYFILFSLISSGFISRYQVGILILILINIILAASLNITVGCLGQITLGHA 68 Query: 72 IAYAIGAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +IGAY+ +L + + + +++G G I+G+P+L+ GDYLAI TL Sbjct: 69 GFMSIGAYTAALLTKSGFLSGYPGYIVALIIGGLVAGVIGFIIGIPALRLTGDYLAIITL 128 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + +LI++ T G G+ R+ ++ Sbjct: 129 AFGEIIR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LI 162 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + S + + + A IR+++ A + + K AF +S+ F G+AG Sbjct: 163 YVITIFSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGG 222 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + + F ++ +I ++ +V+LGGM S + + +L + E+ Y Sbjct: 223 IYAHNLGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY--- 279 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R LL + Sbjct: 280 ------------RMIVYPLILIIMMLFRPQGLLGRKEFQI 307 >gi|253700661|ref|YP_003021850.1| inner-membrane translocator [Geobacter sp. M21] gi|251775511|gb|ACT18092.1| inner-membrane translocator [Geobacter sp. M21] Length = 320 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 130/320 (40%), Gaps = 29/320 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 L+ L S+ Y+ ++ + + + + A GL++++G G +SL + +GAY Sbjct: 9 FVFCLVVLLAPLPLSESYLTNVLVFVGVNSILALGLNLLLGFAGQISLGQAAFFGLGAYG 68 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L S Y + W+ + A+ A +G P L+ +G YLA+ATL + I + Sbjct: 69 SGVLTSVYAFNPWVAMVAVALAVAAFAFAIGFPVLRLKGHYLAMATLGVGVIANIAFNET 128 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G +G+ L + + ++ YY++ G + + L Sbjct: 129 IDLTGGPSGLSGIPNLAIGTFSFDTDLKN--------------YYLVWGFALVMILLSLN 174 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + R I D++ A + K+ F +S+ +AG+ + ISP Sbjct: 175 LVNSRFGRGLRAIHDSEVAARVMGVNARLMKVQVFTLSAFISAIAGSLYCHVMTFISPTS 234 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F ++ +++++++GG+ S+ +L + E+ + Y Sbjct: 235 FSFHTSVELLTMIVIGGLGSVYGSILGALLLTMLPEILRTFHDY---------------D 279 Query: 321 TTLMVIALFLVILMRSHSLL 340 + L ++ + L+ Sbjct: 280 IIVYGSLLVVMTIYMPGGLV 299 >gi|188591022|ref|YP_001795622.1| branched-chain amino acid ABC transporter permease [Cupriavidus taiwanensis LMG 19424] gi|170937916|emb|CAP62900.1| putative branched-chain amino acid transport system permease, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 358 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 80/345 (23%), Positives = 144/345 (41%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + V + F+ + S+ + ++ I LI+ + A GL+I+ G Sbjct: 18 QIFPIRQDR------IGFAVLMAVAFVAIPFVGSEYWFSAILIPFLIFSLAALGLNILTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GAY+ R L ++ + + G+ GLPSL+ +G Sbjct: 72 YAGQLSLGTAAFMAVGAYAAYNFQLRIEGMPVLLTFILAGLSAALVGVAFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL L K+ +N + + + L + Sbjct: 132 YLAVATLAAQFFVVWALTKFPWFSNNSSSGVITAQRLDLFGY-------------AIDTP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +L + + A L R+A AW ++RD A + ++ KL AFAVSS Sbjct: 179 VKKYLFVLAIVTVLALAAKNLVRSATGRAWMSVRDMDVAAEVIGIPLMRTKLLAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 + G+AGA +A + PD F + V+ ++I+GG+ S+ A ++ + Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRVLFMIIIGGVGSILGSFLGAAFILLLPIFLD 298 Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342 + + L + + H + + +++ H L RL Sbjct: 299 NVLPPLASLLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARL 343 >gi|297544137|ref|YP_003676439.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841912|gb|ADH60428.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 322 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 128/316 (40%), Gaps = 41/316 (12%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 ++ I I I ++ A L++VVG G S+ A+GAY+ I+ + Sbjct: 32 IISPFVMLNLIIIAINIILAVSLNLVVGFTGQFSIGHAGFMALGAYASAIMSLNFNAPFI 91 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + V A+++G G+I+G+P+L+ RGDYLAIATL ++EI + ++ + G G+ Sbjct: 92 VSLLVGAIVAGIGGIIIGIPTLRLRGDYLAIATLGLAEIIRGVITNIDYL-GGAYGLMGI 150 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + G ++ +I +++ A ++ Sbjct: 151 PQRTN-------------------------WLWAFGCMLVTVLVIKNFIQSSHGRACISV 185 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+N+ A ++ K+ AF + S F G+ GA A I P+ F F ++ ++ +V Sbjct: 186 RENEIASEAMGINTTKYKVIAFTMGSFFAGIGGALLAHYITFIEPNAFNFLKSFDILVMV 245 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG SL+ A +L + + V+L Sbjct: 246 VLGGQGSLTGSVVAAIVLTLISTFLQSLAELRLIIYAIILIL---------------VML 290 Query: 334 MRSHSLLRLRTPSNFL 349 R LL S L Sbjct: 291 FRPQGLLGTHELSFKL 306 >gi|310829095|ref|YP_003961452.1| branched-chain amino acid transporter permease livM [Eubacterium limosum KIST612] gi|308740829|gb|ADO38489.1| branched-chain amino acid transporter permease livM [Eubacterium limosum KIST612] Length = 335 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 141/349 (40%), Gaps = 50/349 (14%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L K + + +V +++ + Y + I I ++ A L+IV G LG ++ Sbjct: 5 LKKSYIVNAISMIVIFAVIYSLVTFKIVTNYFGGIVILTCIMIIMATSLNIVAGFLGEMA 64 Query: 68 LNCVIAYAIGAYSYVILGSRYGL---------SIWLLIPVSAMISGACGMIMGLPSLKFR 118 L AIGAY+ + + + + +G G+++G PSL+ R Sbjct: 65 LGHAGFMAIGAYTAASVSIAITNGNDSLPALLVLIIASLAGGVAAGIVGIVIGTPSLRLR 124 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYL I T+ +EI + + ++P T G G+ R Sbjct: 125 GDYLGIVTIGFAEIIRIFFVNFQP-TGGAQGLKGIPR----------------------- 160 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 I + + + +I L R+ A +IR+++ A + K+ AF +S Sbjct: 161 --IATLGYVYWIMIVVILLIFTLGRSKFGRAIMSIREDEIASEAAGIPTTKYKVMAFTIS 218 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 S F G+ G+ +A + + P+ F+F +I + IV+LGG+ S++ + +L + EL Sbjct: 219 SFFAGVGGSLYAHYQGYLDPNKFQFMFSIEIFVIVVLGGLGSVTGSILSAIVLTVLPELL 278 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + Y + +AL ++++ R +L S Sbjct: 279 RQFSEY---------------RLLVYSLALVIMMIFRPQGMLGRYEFSL 312 >gi|192973018|gb|ACF06918.1| branched chain amino acid ABC transporter permease protein [uncultured Roseobacter sp.] Length = 358 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 74/344 (21%), Positives = 141/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y L FL + + + +++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYAVLA------FAFLVIPFIINDYWANAVLVPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +SI + + +S I+ A + GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPEVSIMIHVVISGGITAAVVTVFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWLFNRVAWFYNYS---------ASGQINAPDRTVFGHLVTGPNTEAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y + L ++ + + R A+ W IRD A + + AKLSAFA+S FI Sbjct: 185 KYMICLVFLTVAGILARNMTRGALGRKWSAIRDMDIAAEIIGVNPLTAKLSAFAISGFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F + + ++F ++ +V+ ++I+GG+ S+ A ++ + L Sbjct: 245 GISGALFFSVYLGAAEVGEVFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFMVLLPVLLKN 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + ++ + + ++ H L +L Sbjct: 305 VLVGGLGWDTALA---AHLEFVIVGALIIVFLIAEPHGLAQLWR 345 >gi|329901850|ref|ZP_08272937.1| Branched-chain amino acid transport system permease protein livM [Oxalobacteraceae bacterium IMCC9480] gi|327548942|gb|EGF33559.1| Branched-chain amino acid transport system permease protein livM [Oxalobacteraceae bacterium IMCC9480] Length = 346 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 81/322 (25%), Positives = 138/322 (42%), Gaps = 16/322 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A LLL L + +Y + + + ++ GL+++ G GL+SL +GA Sbjct: 24 AWFGVLLLALVAFPFMANEYWLYLACLVGLNIVSTTGLNLLTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL RYG L + +++ G+++GLPSL+ +G YLAIAT+ + + Sbjct: 84 YTVAILQVRYGSPFLLNLLAGGIVAMLGGILVGLPSLRVKGLYLAIATIAAGFMTHFLFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W IT G G+ V R + + +Y+V+ + L Sbjct: 144 HWASITGGNGGMTVPPA---------------RLFGAELDTSFRLYWVIAPIMILMVFGA 188 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT I A+ IRD + L ++ KL +FA+SS + G+AG FA ++P Sbjct: 189 ANLFRTRIGRAFIAIRDRDISAAVLGIPLMPYKLMSFAISSFYAGVAGGLFAYFFRVVTP 248 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++ VI+GGM ++S + V EL + + + Sbjct: 249 ESFPLLMSIFFLAAVIVGGMGTISGSIFGAIFMTLVPELLK-LIVGWLPLGDNATLVLSP 307 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 T + + L ++ H L Sbjct: 308 VRTIVFGSMIVLFLIFEPHGLA 329 >gi|307689667|ref|ZP_07632113.1| inner-membrane translocator [Clostridium cellulovorans 743B] Length = 321 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 42/330 (12%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+Y LL F + + Y + LI ++ A L+++VG G L L +IGA Sbjct: 20 IVIYFLL-FGLIKSKIISNYYAGIINLTLINIILAVSLNLIVGFTGQLCLGHAGFMSIGA 78 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y ++ + G + + I A+++ ++G P+LK GDY AI TL EI + I++ Sbjct: 79 YVSAVITIKLGTPLVISIIAGAIVASIIAALIGYPTLKLTGDYFAITTLAFCEIIRIIIM 138 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G G+ ++L ++ +I Sbjct: 139 -NIDFVGGARGLTGIPLKSN-------------------------LLIILIFMTITIIVI 172 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + ++ A ++R+++ A S+ K+ AF +++ F G+AG +A I P Sbjct: 173 YNIIHSSQGRAMLSVREDEIAAESMGIHSFKYKILAFIIAAFFAGIAGGLYAHYIGYIQP 232 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +F F+++I ++ V+ GGM SLS AT +L + EL +N Y Sbjct: 233 TLFDFNKSIDYLTFVVFGGMGSLSGSVLATILLTFLPELLRDLNDY-------------- 278 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + +AL L+++ R LL + S Sbjct: 279 -RMIIYPLALILLMIFRPQGLLGNKEVSLK 307 >gi|260432031|ref|ZP_05786002.1| branched-chain amino acid ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415859|gb|EEX09118.1| branched-chain amino acid ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] Length = 358 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 77/344 (22%), Positives = 140/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y + L + F + + + +++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYVVLA------VAFGIIPFIINDYWANALLLPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ + ++ I+ G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPDVSMFIHVILAGGITAIVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDVFGIIITGPNAPAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L A I L R W IRD A + + AKLSAFAVSS F+ Sbjct: 185 TYLFCLIFLTACAIIARNLTRGTTGRTWMAIRDMDIAAEIIGVNPLRAKLSAFAVSSFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F ++ +V+ +VI+GG+ S+ A L+ + + Sbjct: 245 GVSGALFFAIYLGAVEVGEAFGIQKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVVLKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + ++ + L +++ H L +L Sbjct: 305 VGADMLGWPTDI---VAHLQLVIVGGLIILFLILEPHGLAQLWR 345 >gi|254503092|ref|ZP_05115243.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222439163|gb|EEE45842.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 320 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 124/320 (38%), Gaps = 26/320 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR---- 87 Y M I I IY + GL+I G GL + +A+GAY+ IL + Sbjct: 3 FLGLVNYALFMAIFIAIYALLVLGLNIQWGFAGLFNAGIAGFFAVGAYTSAILTTEAADG 62 Query: 88 ----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + L + + + + +G L+FR DYLAIA++ ++EI + ++ + Sbjct: 63 RIGGFDLHFVIGWIGAMIAAALVAWPIGKICLRFRSDYLAIASIGIAEIIRLVIKSEPAL 122 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 TNG GI R ++ ++ ++L + + ++ Sbjct: 123 TNGARGIPGIPRPMS--------------DIGYMESQVAYLIIVLAVLIAAYVLVERQFN 168 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 R IRDN+ A ++ + F +L AF +A +G+ GA FA I+P+ Sbjct: 169 APWGRMMRAIRDNEDAAKAMGKDVEFRRLEAFIFGAALMGLGGALFAHFNRSITPEAIDP 228 Query: 264 SE-NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 +V ++ILGG + A++ + + ++ Sbjct: 229 MVATFLVWIMLILGGSGNNRGAILGAAVVWIIWSVSEIATD---RLPHEYAIQAKYIRLF 285 Query: 323 LMVIALFLVILMRSHSLLRL 342 L+ + L LV+ R LL Sbjct: 286 LIGLMLQLVLRFRPEGLLPE 305 >gi|118592870|ref|ZP_01550259.1| ABC transporter, permease protein [Stappia aggregata IAM 12614] gi|118434640|gb|EAV41292.1| ABC transporter, permease protein [Stappia aggregata IAM 12614] Length = 331 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 130/314 (41%), Gaps = 22/314 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL------ 90 Y L Y + GL++ G GL ++ A+GAY+ +L + + + Sbjct: 7 SYGAFFLTMALSYAVICLGLNVQWGQTGLFNVGVAGFVAVGAYTSALLTTPFIVDRIGGF 66 Query: 91 --SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 I + +++G +GL +L+ R DYLAIAT + + Q +L+ +T G Sbjct: 67 GLPIVIGWLGGGLVAGLLSAALGLLTLRLRSDYLAIATFGAAVMIQLVLLNLVGLTGGPF 126 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 GI R F F + ++ V+ + ++ ++ L R+ Sbjct: 127 GIGFIPRP------------FGEFAENTDLFSFANLAVMAALVSVTYLVLEHLVRSPWGR 174 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 R IR+++ A L +L AFA+ +G+ GA A I+PD + + Sbjct: 175 VLRAIREDETAARGLGKNPESYRLQAFAIGGFVMGLGGAAQAHFIGFIAPDNYLPTLTFQ 234 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 V +++I+GG ++ ++ G+ + + F + + + L+ IAL Sbjct: 235 VWTMLIIGGSGNMRGAILGGVLVWGIWAVSGNIVSQLFPASEQ--ARASSLQIVLIGIAL 292 Query: 329 FLVILMRSHSLLRL 342 +V+L+R +L Sbjct: 293 CVVLLVRPRGILGE 306 >gi|90417952|ref|ZP_01225864.1| ABC type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337624|gb|EAS51275.1| ABC type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 576 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 108/320 (33%), Gaps = 39/320 (12%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + Y+ ++ I+ L + A + +V G G+L+ + IGAY+ ++ + Sbjct: 1 MATAPLYLDTYMTNVLIRALFLGVLALTVDLVWGYTGVLTFGQSAFFGIGAYACALVATH 60 Query: 88 YGL---SIWLLIPVSAMISGACGMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKP 142 +G L + + + + ++GL S Y +I TL + + I+ Sbjct: 61 WGFGPGWFALALVIGIVAAAVTAWLVGLLSFYHGASPLYSSIMTLALPIVLVQIIFAGGR 120 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 T +G+ Y+ T + + + A++ Sbjct: 121 FTGSSSGLSGFPTYYWSIDTW--------------------FVIAGILLVAVATVAWLFV 160 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ IR+N+ L + K+ F A +AG +AA + ++P++ Sbjct: 161 RSDYGCILVAIRENEDRCAYLGIPVSRIKIGLFVACGAIGAVAGFGYAAFTNVVAPELGG 220 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F + V LGG +L + G + + Sbjct: 221 FLLGTESLIWVALGGRGTLLGPILGAIGIDVTSSYLSGSLPFLWK--------------F 266 Query: 323 LMVIALFLVILMRSHSLLRL 342 ++ + LVI++ + L Sbjct: 267 IVGVVFVLVIILLPNGFASL 286 >gi|283850453|ref|ZP_06367741.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] gi|283574024|gb|EFC21996.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] Length = 346 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 119/322 (36%), Gaps = 20/322 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L L + I + Y ++V G G+L L + IGA Sbjct: 10 LLVLAGLAAFALPLVVKSPTYLQILILLFFYAYLTTAWNLVGGFAGVLPLGHSLFVGIGA 69 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL +YG+S W+ + +++ G+I+GLP+ + RG Y + T+ +E + ++ Sbjct: 70 YTSTILTLQYGISPWIGMLAGGLLAALFGVIIGLPTFRMRGAYFCLCTIAFAEGIRVMVE 129 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + ++ F + + + YY++L + L ++ Sbjct: 130 NIDNL---------GPLHINGPRGLLIPLKDASFWNYQFMSKEPYYYIILTLLVLVLALT 180 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRIS 257 + R+ I + +A +L + KL + A+S +AG F+A Sbjct: 181 WCISRSKIGYYLAAGGEEPEAAAALGINVANCKLLSMALSCFLTALAGTFYAQLMLYFYP 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + + + I ++GG +++ +L V E Sbjct: 241 KGLMGLDLSFEIAFIALIGGRGTIAGPVIGALVLRPVNEFTRIYLSDMLPG--------- 291 Query: 318 MRHTTLMVIALFLVILMRSHSL 339 H + + L LV+L + L Sbjct: 292 -LHLVIFGLILILVMLYKPQGL 312 >gi|157363983|ref|YP_001470750.1| inner-membrane translocator [Thermotoga lettingae TMO] gi|157314587|gb|ABV33686.1| inner-membrane translocator [Thermotoga lettingae TMO] Length = 322 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 117/323 (36%), Gaps = 24/323 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + L F L + I +L++ +I+ G G S + IGAY Sbjct: 6 LYVILTAFFLLPLIIPDVNFQHIMIMLLLFAGLGESWNIITGFAGQTSFGHAAFFGIGAY 65 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L ++G+S W+ + ++I+ ++ P K +G Y AIATL ++EI + + + Sbjct: 66 TSTVLFYKFGISPWVGMISGSIIAAVIAFLVSYPCFKLKGHYFAIATLAVAEIIKQLFVS 125 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W + F + +I ++ + LS + Sbjct: 126 WDYVEGATGISIPVVDNSFWLMQFHN-------------SKIPYILIVYALFCLSLFAAI 172 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + + IR++ +A +L KL A S+A + G +A I P Sbjct: 173 TIEKNKTGYYLKAIRESHEAAEALGINTTRYKLFAMITSAALTSLFGTLYAQYILYIDPF 232 Query: 260 M-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 M F ++ ++ + +LGG+ ++ +ILI + E + Sbjct: 233 MVFSLEISMKIVLLTVLGGLGNVYGPIIGASILIPLSEYTRNYLGGTGKGI--------- 283 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + + L+ ++ Sbjct: 284 -DLMIYGALIILIACFEPQGVIG 305 >gi|317405193|gb|EFV85532.1| high-affinity branched-chain amino acid transport system permease [Achromobacter xylosoxidans C54] Length = 345 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 71/310 (22%), Positives = 131/310 (42%), Gaps = 17/310 (5%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + Y + + I V A GL+I+ G GL+SL +GAY+ ++ R G Sbjct: 36 FPFVADAYWLYLACLVAINVASATGLNILTGYTGLVSLGQAAFMGLGAYTVAVMELRLGT 95 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + L + + +++ G+++G+PSL+ +G YLAI+T+ S I + W T G G+ Sbjct: 96 PVLLNLLGAGVVAMLGGLLVGIPSLRVKGLYLAISTIAASFIAHFVFANWA-FTGGTGGL 154 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V R + +Y++++ + L L RT I A+ Sbjct: 155 QVPPA---------------RLLGIDLDTSFKIYWLIVPLTALMVLGAANLFRTRIGRAF 199 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 IRD + L ++ KL +F +SS + G+AG +A ++P+ F +I + Sbjct: 200 IAIRDRDISAEVLGIHLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTPESFPLIMSIFFL 259 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +I+GGM S+ + V EL + + + T + + + Sbjct: 260 AAIIVGGMGSILGSILGAVFMTMVPELLK-LVVGWLPVGGDALRLISPVRTIVFGLLIVG 318 Query: 331 VILMRSHSLL 340 ++ H L Sbjct: 319 FLIFEPHGLA 328 >gi|288572907|ref|ZP_06391264.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568648|gb|EFC90205.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] Length = 350 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 106/320 (33%), Gaps = 7/320 (2%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 + Y + I IY + L+++ G G+ SL IGAY +L Sbjct: 25 WWAPENLDGYKIQILNLIAIYSILGLSLNLIYGFTGMFSLGTAGFMCIGAYVSSLLILPE 84 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + I ++ + +A A + + + + Sbjct: 85 MQKDMIFILEP--LNPILYGAHAPFVVAVLAGGVAAAIAGLIIGIPVLRLGGDYLGIATL 142 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G R+ + I + G F + ++ L + N Sbjct: 143 GFAEIIRVVANNIPTITN----GALGLKGIPAYANLWWNYGWMFFTLYVMYRLVNSNFGN 198 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A + IRD++ A ++ ++ +F V S F G+ GA A+ I P MF Sbjct: 199 ALKAIRDDELAAKAMGINTFKYRVISFTVGSFFAGIGGALMASLLTTIDPKMFMVIMTYN 258 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 V+ +V+ GG+ SLS ++ ++E + + + ++L Sbjct: 259 VLMVVVAGGLGSLSGSVIGAVVVTVLLEWLRFVENPITLGSFEIP-GVPGMRMVIFALSL 317 Query: 329 FLVILMRSHSLLRLRTPSNF 348 ++IL R ++ + S Sbjct: 318 IMIILYRPEGVMGNKELSWE 337 >gi|302342738|ref|YP_003807267.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075] gi|301639351|gb|ADK84673.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075] Length = 346 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 123/347 (35%), Gaps = 19/347 (5%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + KY + + A + ++ +GA Y+ S+ + + I V+ A L++V G +G Sbjct: 9 PMQKYSLNMAMAAALVGVVALAQVGAI--DLYVQSVLMFMAINVIMASSLNLVNGFMGEF 66 Query: 67 SLNCVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 S +GAY + + ++ + + A ++ L I Sbjct: 67 SCGHGGFMCVGAYVGSVLSMMLFTDSHLYGAALLPPQWAVALFPLVLLGGGAAAALAGVI 126 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 + + + L N V + G + +R V+ +M Sbjct: 127 VAVPSFKTRGDYLAIITLAVNYIVISAVHNLDIVGGPRGLTGMRPTIMAMGQVVDLPWMM 186 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 +L II + I ++ A ++ KL F VSS G+ Sbjct: 187 IWVLVGATGCLFIIRRYVNSTYGKGVIAISQDEIAAEIMSVNTNRLKLITFMVSSGLAGV 246 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA +A ++P F ++ + +V LGGM SLS A + ++E+ + Y Sbjct: 247 AGALYAHVVGYLNPGAFDILKSTEAMVMVYLGGMGSLSGSVIAAVLFTLLLEVLRPLQIY 306 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + ++ + L L++ R L+ + S+ R Sbjct: 307 KW---------------VIVPLILILLMQFRPEGLMGDKELSDIFPR 338 >gi|89093717|ref|ZP_01166664.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Oceanospirillum sp. MED92] gi|89082113|gb|EAR61338.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Oceanospirillum sp. MED92] Length = 533 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 98/297 (32%), Gaps = 21/297 (7%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ +I + V+ + ++G Sbjct: 258 AAIGLAITFGVMGVINMAHGEMIMLGAYTTYVVQLLMPDAIEYSLLVAVPAAFVVSGLVG 317 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + +L L + +L + + + + Sbjct: 318 ILIERGVIRFLHGRPL------ETLLATFGISLILQQLVRTVFSPLNRQVESPLWMSGSL 371 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + + + Y+L + +++ LR+T++ R + N+ ++ + Sbjct: 372 EINPVLSLTLNRLYILAFALLVFGLLLIILRKTSLGLNVRAVSQNRSMAKAMGIRTDWVD 431 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG + + S I +V+ GG+ +L A L Sbjct: 432 AMTFGLGSGIAGIAGVALSQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLWGTLVAAFSL 489 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + S L+++ + L I + L + + Sbjct: 490 GVANKFLEPVTGAVLAS-------------ILVLVFIILFIQKKPKGLFPQKGRAAE 533 >gi|160939123|ref|ZP_02086474.1| hypothetical protein CLOBOL_04017 [Clostridium bolteae ATCC BAA-613] gi|158438086|gb|EDP15846.1| hypothetical protein CLOBOL_04017 [Clostridium bolteae ATCC BAA-613] Length = 357 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V +++ + +G + + + IYV+ A L++ VG LG LSL Sbjct: 15 ITYGMVVAAYIIMQVLVGTGHISSLMKGLLVPFCIYVIMAVSLNLTVGILGELSLGHAGF 74 Query: 74 YAIGAYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +GA++ + L + + I + A+ + G+I+G+P L+ RGDYLAI TL Sbjct: 75 MCVGAFAGALFSKCMKGAIDPTLGMVIAILIGAVTAALFGVIIGIPVLRLRGDYLAIVTL 134 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI +N++ + L I + + + Sbjct: 135 AFGEIIKNLVNAVYLGRDASGFHISFKDSMSLKLGEGGEILIKGAQGITGTPQAATFTIG 194 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + ++ I++ L + A IRDN+ A S+ I KL AF++S+ G+AG Sbjct: 195 VILVLITLFIVMNLVNSRTGRAIMAIRDNRIAAESIGINITKYKLLAFSISAGLAGIAGV 254 Query: 248 FFAASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 +A + ++ P F ++ +I+++ V+LGG+ ++ AT IL + E+ G++ Y Sbjct: 255 LYAHNLTTLTALPKNFGYNMSIMILVYVVLGGIGNIRGSVIATVILYLLPEMLRGLSNY- 313 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + I L L +L Sbjct: 314 --------------RMLMYAIVLILAMLF 328 >gi|159185205|ref|NP_355365.2| ABC transporter, membrane spanning protein (urea/amide) [Agrobacterium tumefaciens str. C58] gi|159140469|gb|AAK88150.2| ABC transporter, membrane spanning protein (urea/amide) [Agrobacterium tumefaciens str. C58] Length = 537 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 95/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAYS ++ L S I+ ++ Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMIGAYSTFMVQEVIRSHFPGLFDWSLAIALPVAFLVT 317 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + G+ Sbjct: 318 GFVGLVMER--GVIRFLYGRPLETLLATWGISLMLQQGVRSIFGPTNREVGSPGW-MSGS 374 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F ++ + +++ + ++++ L+R+A R + N++ S+ + Sbjct: 375 FSVGYLNFTWNRVWIVCFSLSVFFALLVLLKRSAFGLQMRAVTQNRRMASSMGIRTPWVD 434 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S G+AG A S+ S I +V+ GG+ +L L Sbjct: 435 AFTFALGSGVAGLAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALSL 492 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L+++ + L I R L L+ + Sbjct: 493 GVLNKFLEPTVGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAIE 536 >gi|257867467|ref|ZP_05647120.1| branched-chain amino acid transport system/permease component [Enterococcus casseliflavus EC30] gi|257873796|ref|ZP_05653449.1| hydrophobic amino acid uptake family ABC transporter [Enterococcus casseliflavus EC10] gi|257801523|gb|EEV30453.1| branched-chain amino acid transport system/permease component [Enterococcus casseliflavus EC30] gi|257807960|gb|EEV36782.1| hydrophobic amino acid uptake family ABC transporter [Enterococcus casseliflavus EC10] Length = 325 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 75/341 (21%), Positives = 144/341 (42%), Gaps = 42/341 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 +Y+ I LA + LF + D++ + I I ++ A L++++G G SL Sbjct: 6 RYNLIWLALAAILYFGLFAAYNGGMINLFSDAIIVNIGINIILAVSLNLIIGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I + + V ++SGA +++G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAGAILSASNPTFGGFLTGLLVGMLVSGAVALVVGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++EI + +L+ + +TNG AGI+ + ++ Sbjct: 126 GVAEIIRILLVNLRGLTNGPAGIFGLPQFSNWQ-------------------------IV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 LS ++ + A IR+++ A S+ K+ AF + + +AG Sbjct: 161 FLFAVLSILVVSNFIHSGPGRATLAIREDEIAAESMGVNTTKYKVIAFVMGAVMASIAGT 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A+ + + P + F ++I V+ IV+ GG+ S + + +L + G Sbjct: 221 LYASYQQSVFPRDYGFMKSIDVLIIVVFGGLGSTTGAVVSAVVLGILNMYLQGF------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + +AL ++++ + LL S Sbjct: 275 ---------SDLRMIIYALALIIIMIFKPSGLLGTWEFSVK 306 >gi|291004015|ref|ZP_06561988.1| amino acid ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 351 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 120/326 (36%), Gaps = 27/326 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ ++ L + + +I S+G+ I Y + A + V G G +SL + Sbjct: 10 VIGLLALAALVIAFPSLAPDPFILSVGVVITSYAVLATSWNFVGGFTGYISLGHAAYSGL 69 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L R G W+ + ++ + +G+ SL+ RG I ++ + I + Sbjct: 70 GAYATGLLIVRAGFDPWVALFAGGVLVALLAVPIGIASLRVRGASFVIVSIALVLITLLV 129 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 W T G G+ V RFF ++ + + ++V+ Sbjct: 130 FQSWGDFTGGSDGLRVPRPFGPDVMRPEQHERFFYLHAALLAVALLCWWVI--------- 180 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 R+ + IR+++ SL KL AF VS+ F +AG +A + Sbjct: 181 -----DRSRFGAGLKAIREDEDKAQSLGVPTFAYKLVAFVVSAFFTALAGGLYALWFGFL 235 Query: 257 SP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P F ++ + +LGG+ SL ++ +E Sbjct: 236 DPVFQFSILAGSYLVLMSLLGGIRSLFGPVLGAVVVGYAMEYFKA------------QYG 283 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 H M + L +V+L ++ Sbjct: 284 DTQLHLVAMGVLLAVVVLFMPDGIIP 309 >gi|222055889|ref|YP_002538251.1| inner-membrane translocator [Geobacter sp. FRC-32] gi|221565178|gb|ACM21150.1| inner-membrane translocator [Geobacter sp. FRC-32] Length = 320 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 14/284 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + L + + Y+ ++ + + I M A L++++G G +SL + +GAYS Sbjct: 9 AAFVAIILVIPFLMKESYLINVMVFVGINTMLAVALNLLLGYAGQISLGHAAFFGLGAYS 68 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L + +G++ WL++ +A + G ++G P LK +G YLA+ATL I + + Sbjct: 69 SGVLTATHGMNPWLVMFAAAAVVGMLAFLIGFPILKLKGHYLAMATLGFGIILYIVFNET 128 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 IT G +G+ L T S ++ YY++ L + Sbjct: 129 VDITGGPSGLSGIPNLQLGQMTFDSDMKN--------------YYLIWVFALLVMLFAVN 174 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + I + R I D++ A + K+ FA+S+ +AG+ +A + ++P Sbjct: 175 LTNSRIGRSLRAIHDSEIAARVMGVNARLLKVQIFALSAVISSLAGSLYAHTMAFVAPAS 234 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 F F+ ++ ++++V++GG+ S+ A+L + E ++ Y Sbjct: 235 FGFNFSVELLTMVVIGGLGSVYGSFLGAALLTLLPEFLRFLHDY 278 >gi|326382667|ref|ZP_08204358.1| branched-chain amino acid abc transporter integral membrane subunit [Gordonia neofelifaecis NRRL B-59395] gi|326198786|gb|EGD55969.1| branched-chain amino acid abc transporter integral membrane subunit [Gordonia neofelifaecis NRRL B-59395] Length = 610 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 112/300 (37%), Gaps = 16/300 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + F I + GL++ +G G L+L YA GAY Sbjct: 18 ALVFAAAVFFAPMMGLDAANTRQVQLACILALVVSGLNLSLGYAGELALGQAAMYAAGAY 77 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L I + + + ++ G+I G+P L+ LA+ + + + +IL Sbjct: 78 TAGLLSQEGHTDIVVQLIAAGAVALIVGVITGIPGLRLGSWSLAMTSFFLILLVPDILAI 137 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + T G+ G+ + F G + + YYV+ G+ ++ Sbjct: 138 FGGKTGGRNGLSGMEPPTFFGQDIGTD----------------FYYVVAGVTIAWFVVMR 181 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + A+RT++ + S ++ KL +A+ + G+AGA FA + I+P+ Sbjct: 182 NLVVSRHGIAFRTLKQSPVLARSQGVSVFRMKLLGYALGAIPAGLAGALFANTDLFIAPE 241 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F F+ V++ ILGG S+ AI+ Y F + Sbjct: 242 AFGFTFATAVLAASILGGSASVYGAVLGAAIMQFGPNQSTAFQEYALVVYGGFLIVGGVL 301 >gi|150376327|ref|YP_001312923.1| inner-membrane translocator [Sinorhizobium medicae WSM419] gi|150030874|gb|ABR62990.1| inner-membrane translocator [Sinorhizobium medicae WSM419] Length = 537 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S L S I+ + Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLAIALPLAFLFT 317 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + Sbjct: 318 GTVGLVLER--GVIRFLYGRPLETLLATWGISLILQQSVRTIFGPTNREVG-NPFWMSGA 374 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + A+++ L++T + R + N++ S+ Sbjct: 375 FELGGLTITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSMGIRTPLVD 434 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S G+AG A S+ I +V+ GG+ +L L Sbjct: 435 ALTFALGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFSL 492 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L+++ + L I R L L+ + Sbjct: 493 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 536 >gi|303247751|ref|ZP_07334020.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] gi|302490835|gb|EFL50734.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] Length = 338 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 65/322 (20%), Positives = 122/322 (37%), Gaps = 20/322 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L+ L + + I + Y ++V G G+L L + IGA Sbjct: 10 LLGLAALVAFGLPLVVTSPTYLQILILLFFYAYLTTSWNLVGGFAGVLPLGHSVFVGIGA 69 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL +YG+S WL + V +++ G+IMGLP+ + RG Y + T+ +E + I+ Sbjct: 70 YTSTILTLQYGVSPWLGMLVGGVLAAIVGIIMGLPTFRLRGAYFCLCTIAFAEGIRVIVE 129 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + + F + + ++ YY++L M L + Sbjct: 130 NINYL---------GPLHINGPRGLLIPLTQGSFWNYQFMSKLPYYYIILVMLVLVLFLT 180 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRIS 257 + R+ I + +A +L + KL A A+S F +AG F+A Sbjct: 181 WGISRSKIGYYLAAGGEEPEAAGALGINVANYKLLAMALSCFFTALAGTFYAQLMLYFYP 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + + + I ++GG +++ +L + E L Sbjct: 241 KGLMGLDLSFEIAFIALIGGRGTIAGPVIGALVLRPLNEFTRIYLSDMLPGL-------- 292 Query: 318 MRHTTLMVIALFLVILMRSHSL 339 H + + L LV+L + L Sbjct: 293 --HLVIFGLILILVMLYKPQGL 312 >gi|187926697|ref|YP_001893042.1| ABC transporter related [Ralstonia pickettii 12J] gi|241666209|ref|YP_002984568.1| ABC transporter [Ralstonia pickettii 12D] gi|187728451|gb|ACD29615.1| ABC transporter related [Ralstonia pickettii 12J] gi|240868236|gb|ACS65896.1| ABC transporter related [Ralstonia pickettii 12D] Length = 608 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 113/299 (37%), Gaps = 15/299 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L +++ L + ++ ++ I +Y + A GL ++ G GL S +G Sbjct: 22 LLTALFVIVLALLPVLPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS L ++YG+S W+ + +I+ ++GL +++ G YL +AT+ + Sbjct: 82 AYSTAYLTTQYGVSPWIGLLAGLVITVVSAYLIGLITMRMSGHYLPLATIAWGLSLFFLF 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + I + + M+Y++ + ++ Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNLLGNPLQTGREMFYLIWAVVVVAVLA 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + A R ++ ++ + K+ F ++ ++G +A + ++ Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVCAAVLACLSGFLYAHLQRAVN 246 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P F + I + + ++GG+ + +L + + + + F+ Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGVLTILKDSLQSILPKLLGTNGNFEIIV 305 >gi|126724809|ref|ZP_01740652.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2150] gi|126705973|gb|EBA05063.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2150] Length = 358 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 76/344 (22%), Positives = 140/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F +R ++Y + + + + + ++ + LIY + A GL+I+ G Sbjct: 20 FPIRFDRYRFY------AVVFVAYCIIPFIINDYWASAIFVPFLIYAIAAIGLNILTGFC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+G YS ++ S ++I + + ++ +I+ G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGGYSVYKLMTSFPDVNIAIHVLLAGLITAGVGILFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGMINSPERTIFGYIVTGPSTEAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y + L L A + + R + W IRD A + + AKLSAFA+SS FI Sbjct: 185 KYLICLVFLTLCAVLARNMTRGTLGRKWMAIRDMDIAAEIIGVDPLKAKLSAFAISSFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA F A + D F +++ +V+ ++I+GG+ S+ A ++ + L Sbjct: 245 GIAGALFFAVYLGAAEAGDSFGITKSFLVLFMIIIGGLGSIFGSFAGAAFMVLMPVLLKN 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + ++ + + ++M H L +L Sbjct: 305 VLVGQLGWATDLA---AHLEFVIVGALIIIFLIMEPHGLAQLWR 345 >gi|113869589|ref|YP_728078.1| ABC-type transporter, ATPase and permease components [Ralstonia eutropha H16] gi|113528365|emb|CAJ94710.1| ABC-type transporter, ATPase and permease components [Ralstonia eutropha H16] Length = 613 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 62/335 (18%), Positives = 133/335 (39%), Gaps = 27/335 (8%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 RLN+ ++ VV LL A + ++ ++G I +Y + A GL ++ G G+ Sbjct: 21 RLNRNRVLVLAFIVVLVLL-----PALPTPEFWITLGNYIGLYSIVAIGLVLLTGVGGMT 75 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S +GAYS L +++GLS W + V +I+ A ++GL +++ G YL +AT Sbjct: 76 SFGQAAFVGLGAYSTAYLTTQFGLSPWFGLMVGLVITMASAYVIGLITMRMSGHYLPLAT 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + + + G+ L G ++S M+Y+ Sbjct: 136 IAWGLSLFFLFGNLEFL-GKYDGLNGIPVLSLFGIELQS--------------GRSMFYL 180 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + L+ + L + A R ++ ++ + K+ F V++ ++G Sbjct: 181 IWAVVLLAVLAMQNLLNSRPGRAIRALKGGGVMAEAMGVNTAWMKVVIFVVAAVLACVSG 240 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A + ++P F + I + + ++GG+ + IL + ++ G+ Sbjct: 241 FLYAHLQRAVNPTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGILTILKDVLQGVLPKLL 300 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + F + + L L++ + Sbjct: 301 GANGNF-------EIIVFGVLLVLLLQYARDGIWP 328 >gi|226360135|ref|YP_002777913.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226238620|dbj|BAH48968.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 329 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 122/310 (39%), Gaps = 6/310 (1%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +G + Y + A GL++ G GLL+ + +G Y I+ Y +W+ I V Sbjct: 15 IGPSAIFYALLAIGLNLHFGYAGLLNFGQIGFALLGGYGVGIMTVTYQQPLWVGILVGLA 74 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159 +G +++G+P+L+ R DYLAI T+ SEI + I IT G++ + Sbjct: 75 AAGLLAVVLGIPTLRLRADYLAIVTIAASEILRLIFRSTASDSITGSTNGLFGFADPFTT 134 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + S ++ F +++ V + + + L + + +R+++ A Sbjct: 135 LSPFDSGKQYNFLGVKFYGDDLWSMVVGWTLVLVLCGFVYLLTHSPWGRVLKAVREDEDA 194 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L + K+ A + G+ G F A I+PD + ++ +ILGG Sbjct: 195 ARALGKNVFVYKMQALVLGGMIGGLGGVFNALQTKSINPDFYSTAQTFFAFGALILGGAA 254 Query: 280 SLSKIAKATAILIGVV----ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 ++ + ++ L L + L+ I + ++++ R Sbjct: 255 TVFGPVVGAMLFWFLLAIPDALLRQAISGPEPLLPLTEQQVGAMRFVLLGIMIAVLMIFR 314 Query: 336 SHSLLRLRTP 345 +L + Sbjct: 315 PQGILGNKRE 324 >gi|307266491|ref|ZP_07548025.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1] gi|306918471|gb|EFN48711.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1] Length = 322 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 128/316 (40%), Gaps = 41/316 (12%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 ++ I I I ++ A L++VVG G S+ A+GAY+ I+ + Sbjct: 32 IISPFVMLNLIIIAINIILAVSLNLVVGFTGQFSIGHAGFMALGAYASAIMSLNFNAPFI 91 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + V A+++G G+I+G+P+L+ RGDYLAIATL ++EI + ++ + G G+ Sbjct: 92 VSLLVGAIMAGIGGIIIGIPTLRLRGDYLAIATLGLAEIIRGVITNIDYL-GGAYGLMGI 150 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + G ++ +I +++ A ++ Sbjct: 151 PQRTN-------------------------WLWAFGCMLVTVLVIKNFVQSSHGRACISV 185 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+N+ A ++ K+ AF + S F G+ GA A I P+ F F ++ ++ +V Sbjct: 186 RENEIAAEAMGINTTKYKVIAFTMGSFFAGIGGALLAHYITFIEPNAFNFLKSFDILVMV 245 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG SL+ A +L + + V+L Sbjct: 246 VLGGQGSLTGSVVAAIVLTLISTFLQSLAELRLIIYAIILIL---------------VML 290 Query: 334 MRSHSLLRLRTPSNFL 349 R LL S L Sbjct: 291 FRPQGLLGTHELSFKL 306 >gi|34557811|ref|NP_907626.1| ABC transporter permease [Wolinella succinogenes DSM 1740] gi|34483529|emb|CAE10526.1| ABC TRANSPORT SYSTEM PERMEASE PROTEIN [Wolinella succinogenes] Length = 318 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 109/316 (34%), Gaps = 7/316 (2%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 YI + I I+ + A +++ G G LSL A+GAY I+ L Sbjct: 7 NDYILRIMNNIFIFAILAVSYNLINGVTGQLSLEPNGFVAVGAYITSIMLLSPEAK--LD 64 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + A + + A L + F ++ + G + Sbjct: 65 MYQLADPHALVLWMSSSFIPALLASGVCAALLALLLSFPVFRVRGDYLAIVTLGFGFIIK 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + V + I +I Y + + +IL + + A + +RD Sbjct: 125 I----LAVNNPQITNGAIGLNEIPQITNIYWSGIIALAATILILQIVYSKFGRAMKAVRD 180 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A ++ K AF S+ G+ G AA ISPD+F F ++ I++L Sbjct: 181 DEDAAIAMGIDTFRIKTCAFTTSAFLEGIGGGLLAALLTTISPDLFDFMLTFQLLIIIVL 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S S I+IG E ++ ++ + + L +++L Sbjct: 241 GGLGSTSGAILGAIIVIGGGEWLRFLDQPLSFFGQDLG-TYPGLRMVIFSVILLILMLFA 299 Query: 336 SHSLLRLRTPSNFLER 351 ++ + R Sbjct: 300 REGIMGKKELWELFRR 315 >gi|217968845|ref|YP_002354079.1| inner-membrane translocator [Thauera sp. MZ1T] gi|217506172|gb|ACK53183.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 346 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 16/321 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + L + L + +Y + + I + GL+I+ G GL+SL IGA Sbjct: 24 AWLAILAVALIGFPFLADEYWLYLACLVAINIASTTGLNILTGYTGLVSLGQAAFMGIGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ L + G + L + ++ G+++GLPSL+ +G YLAIAT+ S + + Sbjct: 84 YTVAALEQKLGAPVLLNLLAGGFVAMLGGLVVGLPSLRVKGLYLAIATIAASVVLHFVFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G AGI + + S +Y++ + + L + Sbjct: 144 NWHAVTGGHAGITLVPAEILGLSFDTSFR---------------LYWLFVPITILMVAGA 188 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT I A+ IRD + L ++ KL +F +SS + G+AG +A ++P Sbjct: 189 ANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGMWAYFFRVVTP 248 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++ VI+GGM ++ + V E + + + Sbjct: 249 ESFPLILSIFFLAAVIVGGMGTILGAILGAVFMTMVPEALK-LVVGWLPLSADATLILSP 307 Query: 319 RHTTLMVIALFLVILMRSHSL 339 T + + + ++ L Sbjct: 308 VRTIVFGVLIVGFLVFEPLGL 328 >gi|110835371|ref|YP_694230.1| branched-chain amino acid ABC transporter permease [Alcanivorax borkumensis SK2] gi|110648482|emb|CAL17958.1| branched-chain amino acid ABC transporter, permease protein [Alcanivorax borkumensis SK2] Length = 558 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 97/301 (32%), Gaps = 29/301 (9%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----SRYGLSIWLLIPVSAMISGACG 107 A GL+I G +G++++ +GAY+ ++ + + S+ + IP + ++S G Sbjct: 282 AAIGLAITFGVMGVINMAHGELIMLGAYTTYVVQQLLPTSHEWSLLIAIPAAFLVSAFVG 341 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 +++ + + +L + + + V + Sbjct: 342 ILIERFV----------IRFLYGRPLETLLATFGVSLILQQAVRVIFSPLNRTVITPEWM 391 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + Y++ + +++ L++T + R + N+ SL Sbjct: 392 SGALEINPVFSLTYNRLYIIFFALAVFLALLTLLKKTRLGLQVRAVSQNRATARSLGIRS 451 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 F + S G+AG A + S I +V+ GG+ +L A Sbjct: 452 ERVNALTFGLGSGIAGVAGVALAQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLWGTLTA 509 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L +L M ++++ + L I + L R + Sbjct: 510 AFSLGIANKLLEPMAGAVLAK-------------IVVLVFIILFIQRKPRGLFPQRGRAA 556 Query: 348 F 348 Sbjct: 557 E 557 >gi|149200898|ref|ZP_01877873.1| inner-membrane translocator [Roseovarius sp. TM1035] gi|149145231|gb|EDM33257.1| inner-membrane translocator [Roseovarius sp. TM1035] Length = 358 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 80/344 (23%), Positives = 140/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F +R ++Y L+A F + + +++++ + LIY + A GL+I+VG Sbjct: 20 FPIRFDRYRYYAVLVA------AFAVVPFVINDYWVNAVFLPFLIYSIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +SI+ I ++ I+ ++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYASYKLMTAFPEVSIFFHIILAGGITSIVCVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N T F + Sbjct: 134 AVATLAAQFFLVWLFNRVGWFYNYS---------ASGQITAPERTVFGIAVTGANNPPWS 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L +A I L R W IRD A + + AKL+AFAVS F+ Sbjct: 185 AYLFCLVFTVAAAIIARNLTRGMAGRKWMAIRDMDIAAEIIGVNPLKAKLTAFAVSGFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F +++ +V+ +VI+GG+ S+ A L+ + L Sbjct: 245 GISGALFFAVYLGAVEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVLLKN 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L ++ + + ++ H L +L Sbjct: 305 ---TLVGGLGWPTDLAAHLEFIIVGALIIIFLIAEPHGLAQLWR 345 >gi|26987354|ref|NP_742779.1| inner-membrane translocator [Pseudomonas putida KT2440] gi|148545907|ref|YP_001266009.1| inner-membrane translocator [Pseudomonas putida F1] gi|24982006|gb|AAN66243.1|AE016252_11 branched-chain amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|148509965|gb|ABQ76825.1| inner-membrane translocator [Pseudomonas putida F1] Length = 339 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 121/337 (35%), Gaps = 30/337 (8%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 L + K L VV L+ L + ++ +ILI+ M A ++++G G Sbjct: 6 PLPVAKGRAPALLSLVVASLVALPLLLPSA------TLATEILIFAMAALACNLLLGYTG 59 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 LLS I + +GAY +L ++ + +A+ +++G +++ G Y + Sbjct: 60 LLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVM 119 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL S++ + T G G+ R I + Y Sbjct: 120 LTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRP---------NIEIAGHVLVDLADPRHFY 170 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + + L + L + R+ + IR+N+ ++ K+ F +S A G+ Sbjct: 171 VFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGI 230 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA +A + ++ + I+GG SL ++ + ++ + Sbjct: 231 AGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPR 290 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L+ + L LV++ L Sbjct: 291 W---------------LMLLGVILILVVVFMRGGLWG 312 >gi|307726403|ref|YP_003909616.1| inner-membrane translocator [Burkholderia sp. CCGE1003] gi|307586928|gb|ADN60325.1| inner-membrane translocator [Burkholderia sp. CCGE1003] Length = 369 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 68/340 (20%), Positives = 132/340 (38%), Gaps = 33/340 (9%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L L++Y +L L VV L L L G S+ ++L++ + A G ++++G GL Sbjct: 23 LALHRYRFLLLALLVVCILPLTLRSG---------SLATEVLVFALAALGCNLLLGHTGL 73 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LS I + +G+YS ++ ++ L + + + + +I A ++G S++ RG Y + Sbjct: 74 LSFGQGIFFGLGSYSAGLVLTKAALPVPVALLAAILIGAAAAALVGWFSIRQRGTYFVML 133 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++F + +T G G+ R + F + Y Sbjct: 134 TLAFGQLFYFLAYTTPDLTGGDNGLLDIPRPA---------LGLFGKELVALTSPWQYYG 184 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + + + +++ + + IRDN+ ++ + KL AF VS A G+A Sbjct: 185 FVAVLFLVVFWLMMRVSHSVFGRTLLAIRDNEARAAAVGYDVKRFKLMAFVVSGAVTGLA 244 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA A + + +++ + ++GG +L A + + + + Sbjct: 245 GALHALMTGIAPLSNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRW 304 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L+ I L V L L L Sbjct: 305 ---------------LLLLGIVLMAVSLYMQRGLWGLGER 329 >gi|84687013|ref|ZP_01014896.1| branched-chain amino acid ABC transporter, permease protein [Maritimibacter alkaliphilus HTCC2654] gi|84664987|gb|EAQ11468.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2654] Length = 365 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 72/322 (22%), Positives = 131/322 (40%), Gaps = 13/322 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L + + +Y + LI+ + GL + VG G +SL AIGAY+ Sbjct: 25 IAVLAGIMIVLPFLVGEYYLAEATNTLIWALAGMGLMVAVGHTGQVSLGHAAFLAIGAYA 84 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L + L P++ +I+G G I+ +P+++ G YLAIATL + I + ++I Sbjct: 85 DSALMNAGLP-FLLSFPIAGLITGIFGAIIAIPAVRMSGIYLAIATLAVFVIVEEMVIML 143 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +PIT G GI I+ F Y+++LG+ L A Sbjct: 144 EPITGGVGGIMAP------------SIQIFGISFDRYGALQNFYWLILGVVALVAWGYAN 191 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R+ ++ +RD++ + +L + K AF +S+ G+AGA + ++ Sbjct: 192 LMRSPTGRSFLAVRDSEVSARALGINVTRTKSLAFGLSTGVTGLAGALMGHYIGFYNYEL 251 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F +I ++ +V +GG+ + ++ V + + S Sbjct: 252 FSIFISINLLLVVTIGGLGFIQGAFLGAILITAVPQAIAIARDGLNANFGIDLGSVPGLD 311 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T + + L L I+ L Sbjct: 312 TMIFAVILILFIIFEPTGLYGR 333 >gi|313672659|ref|YP_004050770.1| amino acid/amide abc transporter membrane protein 2, haat family [Calditerrivibrio nitroreducens DSM 19672] gi|312939415|gb|ADR18607.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Calditerrivibrio nitroreducens DSM 19672] Length = 278 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 119/310 (38%), Gaps = 41/310 (13%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y+ + I ++ GL+++ G G LSL +IGAYS L + G Sbjct: 4 SFLFNDYVSQVATTTGINIIMVLGLNLITGVTGQLSLGHAAFMSIGAYSSAYLSTALGAP 63 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + G I+G+P L+ RGDYLAIATL EI + L+ G GIY Sbjct: 64 FTVALIFGTFTGALFGAILGIPILRLRGDYLAIATLGFGEIIRVFLLN-TDFLGGALGIY 122 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +L + + + L ++ A + Sbjct: 123 GIPASTNFWN-------------------------VLVLTIFTIFFMYRLEKSRHGMAIK 157 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +IR+++ A + I K+ +F + SAF + G +A I+P F F ++I + Sbjct: 158 SIREDEIASEMMGINISRYKIISFTIGSAFAALGGTLYAHFMTYINPMDFGFMKSIEQLC 217 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +++LGGM S+ T +L + E + Y + L L+ Sbjct: 218 MLVLGGMGSIFGAVVGTIVLSTIPEFLRFASEY---------------RMLTYGVVLILM 262 Query: 332 ILMRSHSLLR 341 ++ R L Sbjct: 263 MIFRPQGLFG 272 >gi|138896565|ref|YP_001127018.1| branched chain amino acid ABC transporter permease [Geobacillus thermodenitrificans NG80-2] gi|134268078|gb|ABO68273.1| Branched-chain amino acid ABC transporter (permease) [Geobacillus thermodenitrificans NG80-2] Length = 328 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 69/344 (20%), Positives = 141/344 (40%), Gaps = 42/344 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + + +LA + ++ + + + + + I V+ A L +++G G Sbjct: 9 KRTRGFWVSIILAFAFFAVVQWLITSGTLNIFYVNTLFFMAINVILAASLHLIIGITGQF 68 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S+ +A+GAY+ I+ + L + + V+ + + G+I+G+PSL+ +GDYLAIAT Sbjct: 69 SIGHAGFFAVGAYASAIMTMKLQLPFAVGVLVAGVAAMLAGLIIGVPSLRLKGDYLAIAT 128 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + +L+ + + + + Sbjct: 129 LGFGEIVRIVLLNIDYVGGAS---------------------------GMTVTHMTTWPW 161 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + ++ +I + A +IR+++ A ++ + K++AFA+ S F G+AG Sbjct: 162 VFACLLITIIVIANFTNSTHGRACISIREDEIAADAMGINTTYYKVAAFAIGSFFAGIAG 221 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A +A I P F F ++ ++ V+LGG+ SLS + +L V Sbjct: 222 ALYAHHFYIIQPSNFGFLKSFDILIFVVLGGLGSLSGATISAVLLTIVSTFLQNY----- 276 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L V+L R L+ + ++ L+ Sbjct: 277 ----------PETRMIIYSLVLIFVMLYRPTGLMGKKELTSLLK 310 >gi|260459127|ref|ZP_05807382.1| urea ABC transporter, permease protein UrtB [Mesorhizobium opportunistum WSM2075] gi|259034681|gb|EEW35937.1| urea ABC transporter, permease protein UrtB [Mesorhizobium opportunistum WSM2075] Length = 538 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 100/319 (31%), Gaps = 18/319 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 L + + I + ++ A GL+I G +G++++ +GAY+ ++ Sbjct: 237 LAFWDAGQNIWYGISLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQQVIR 296 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 S L S +I+ ++ + + + +L W + Sbjct: 297 TSFPGLFDWSLVIALPLAFLVAAIVGLAIER--GVIRFLYGRPLETLLATWGVSLILQQA 354 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + S F + ++L+ + ++ ++RT+ Sbjct: 355 VRSIFGPTNQEVGNPSW-MSGSFSVGQLAITWNRLWILVFALTVFGVLLYVMKRTSWGLQ 413 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + N++ S+ + FA+ S G+AG A S+ I Sbjct: 414 MRAVTANRRMAASMGIRTPWVDALTFALGSGIAGIAGV--ALSQIDNVSPNLGRGYIIDS 471 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +V+ GG+ +L L V + ++++ + Sbjct: 472 FMVVVFGGVGNLWGTLVGAFSLGIVNKFLEPYAGAVLGK-------------IVVLVLII 518 Query: 330 LVILMRSHSLLRLRTPSNF 348 L I R L L+ + Sbjct: 519 LFIQKRPRGLFALKGRAVE 537 >gi|150389846|ref|YP_001319895.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF] gi|149949708|gb|ABR48236.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF] Length = 298 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 118/313 (37%), Gaps = 41/313 (13%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y+ + I I +M GLS++ G GL S AIGAY + ++GL Sbjct: 1 MDWFYLKGILILSGINLMAVLGLSLLTGFTGLFSFGHAGFMAIGAYVTASMTVKFGLPFI 60 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + AM++ + +G +L +GDY IATL E + IL + G G Sbjct: 61 PALLIGAMVASLVSLFIGRWTLNLKGDYFCIATLGFGEAIRLILDNVQYF-GGARGWPGI 119 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L +L M + I++ L R+ + I Sbjct: 120 PLYTNLTN-------------------------VLVMNIIGVIILVNLIRSRHGRNMKAI 154 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+ + A + + KL++ A+S+A+ G+AG A I P MF+ ++ + IV Sbjct: 155 REEELASQIIGINVFKYKLTSLAISAAYAGIAGGMLAHYTGFIQPKMFQLIKSTELTIIV 214 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 I GG+ S+S +L + EL + ++ +++ Sbjct: 215 IFGGLGSISGSVIGAIVLTALPELLRTFAR---------------WRLVVYGASVIFIMI 259 Query: 334 MRSHSLLRLRTPS 346 R L+ + Sbjct: 260 TRPQGLMGGYEIT 272 >gi|192292086|ref|YP_001992691.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192285835|gb|ACF02216.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 407 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 128/349 (36%), Gaps = 14/349 (4%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ + LL ++ + T + + IY +FA G +I+ G G Sbjct: 1 MKHTSKLADIALLIGFAIVVALGPIIFTPIGAGYPDLLQKFAIYGIFAIGFNILFGLTGY 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LS +G+Y+ V + + + +S +++G + +G SL+ G Y +I Sbjct: 61 LSFGHAAFLGVGSYAAVWSFKLLSMDLLPAVAMSVVLAGLLALAIGFVSLRRSGIYFSIL 120 Query: 126 TLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL +++ N+ PITNG+ G+ V + + I + Sbjct: 121 TLAFAQMCYNMAYSVLTPITNGETGLRVLRQDPRYLDAAIGYVSPTPSLFGMQITGWTGF 180 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y+ + + + + + R+ R I+ NQ + LSAF +S F G+ Sbjct: 181 YICGAVLVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYSTRPYLLSAFVISGMFAGL 240 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA AA+ + +++ + V+ + ILGG +L T I+ + N Sbjct: 241 AGALLAATDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVLGTGIIKYFENIFSAYNEA 300 Query: 305 YFNSLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340 ++ F + + V++ ++ Sbjct: 301 QLKAMFTFVPDGLREPVVKTLSLFVGEGWQLTLGLLFMGVVIFLPGGVM 349 >gi|254488254|ref|ZP_05101459.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] gi|214045123|gb|EEB85761.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] Length = 358 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y L + + + +++S+ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYFVL------FVAIAVIPFMINDYWVNSLFLPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ S +S+ + + ++ +I+ A G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTSFPDVSMLIHVLLAGLITAAVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N A ++ + + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAPERTFLGVNITGANTQAW---------A 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L SA + L R ++ W IRD A + + AKL+AFA+SS FI Sbjct: 185 TYLFCLMFVIFSAYVARNLTRGSVGRKWMAIRDMDIAAEIIGVNPLRAKLTAFAISSFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F + + F ++ +V+ ++I+GG+ S+ A L+ + + Sbjct: 245 GISGALFFSIYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVVLKI 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + ++ + + ++ H L +L Sbjct: 305 VGVDWLGWPTDI---VAHLQLVIVGGLIIVFLIAEPHGLAQLWR 345 >gi|209515009|ref|ZP_03263878.1| inner-membrane translocator [Burkholderia sp. H160] gi|209504635|gb|EEA04622.1| inner-membrane translocator [Burkholderia sp. H160] Length = 321 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 132/335 (39%), Gaps = 26/335 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R ++ ++L L A+ LLL + ++G ++L+ + A ++ ++G G+L Sbjct: 5 RQTRHHRLLTLTAIWAVLLLAPYWMPPLGG--YTALGTRVLVLGLAAMSVNFLLGFTGVL 62 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S + +GAY + S L + ++ G G ++G + RG Y A+ T Sbjct: 63 SFGHAAYFGLGAYGAGLALKFVAPSTPLALLCGTLLGGIAGALLGAVCARRRGVYFAMVT 122 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + ++F I +W +T G G+ R+ + + YY Sbjct: 123 IAFGQVFYYIAFQWSSLTGGDDGLRGFSRMP---------LHLGITTIDILSNADAFYYF 173 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L L+ ++ ++ R+ IR+N++ L + AF +S F+G AG Sbjct: 174 VLFCLALTVGLMGFILRSPFGRTMIAIRENERRARFLGIPVDRHIWIAFTLSCFFMGFAG 233 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A +A + P FS++ + + ++GGM SL A+ + + + + Sbjct: 234 ALYALLNNFADPRGLHFSQSGDFVMMAVMGGMRSLWGPLLGAAVFVVLQDYLSSI----- 288 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + + ++L LL Sbjct: 289 ----------TVNWMSFVGMLFIAIVLFFPRGLLG 313 >gi|188582795|ref|YP_001926240.1| inner-membrane translocator [Methylobacterium populi BJ001] gi|179346293|gb|ACB81705.1| inner-membrane translocator [Methylobacterium populi BJ001] Length = 340 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 114/302 (37%), Gaps = 25/302 (8%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ + +LIY ++A G +++ G GLLS + GAY I YGL + ++ Sbjct: 52 ALAVNVLIYGLYAVGYNLLYGYTGLLSFGHAAFFGTGAYVTGIAIGTYGLHPLAAMALAV 111 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 +++ + +G S++ RG Y A+ TL ++++ + ++ T G+ G Sbjct: 112 VVASGLALALGALSIRSRGIYFAMVTLALAQLVYYVALQASSWTGGENG----------L 161 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 F S ++ + Y +L + ++I + + IR+N+ Sbjct: 162 RGFTVTTIDFGIVSLDILNPLTKYLFVLAFVGAALALISRILASPFGAVIEAIRENETRA 221 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + KL AF +S F G+AGA A + D + + + + ++GG + Sbjct: 222 RACGFDVERTKLLAFVLSGLFCGLAGALSAIHLSIVPLDSLAYHTSGTAVVMTLVGGAGT 281 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 ++ + ++ ++ + L +L L Sbjct: 282 FFGPFVGALTVLVLEDVLSLWTPHW---------------QLALGSVFILFVLFMPRGLW 326 Query: 341 RL 342 Sbjct: 327 GT 328 >gi|148258223|ref|YP_001242808.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146410396|gb|ABQ38902.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 520 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 91/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ L S +I+ ++ Sbjct: 241 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEVIRTRYPALFDYSLLIAAPLAFLVA 300 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 I + + +L W + + A S Sbjct: 301 GAIGVLIER--TIIRFLYGRPLETLLATWGLSLILQQAVRSAFGPTNREVGNPSW-MSGA 357 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++L + A ++ LR TA+ R + N++ S+ Sbjct: 358 FELGQITITYNRLWILCFTMAVFAILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 417 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 418 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFTL 475 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + +++ + L I R L L+ + Sbjct: 476 GIANKFLEPVAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAVE 519 >gi|319790905|ref|YP_004152545.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315593368|gb|ADU34434.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 644 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 129/335 (38%), Gaps = 33/335 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 L + + A V L+L + T + Y + I +LI +FA L ++G G+ Sbjct: 314 PLRRPSNAYLIAAAVLALMLAVLPFLTVNSPYTMVLMIDLLIAALFATSLHFIMGPAGMH 373 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S + +GAY +L L + + + V+ +++ ++ G +++ G YLA+ T Sbjct: 374 SFGHAAYFGLGAYGAALLVRSLHLPMEIALIVAPVVAALGALVYGWFAVRLSGVYLAMLT 433 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++I I +W T G G+ + + + Y++ Sbjct: 434 LAFAQITWAITYQWDSFTGGSNGLTGVWPSEW------------------LSNKQAYYWL 475 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 L + + + + A R RD+ ++ + + AF ++ G+AG Sbjct: 476 TLVLVGAGVWWLRRVLFSPFGYALRAGRDSVLRADAIGIDVKRMQWMAFVIAGTVAGLAG 535 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A +A S+ ISP+ +++ + +V+LGG+ +L+ + + Y+ Sbjct: 536 ALYAFSKGSISPESLSVGKSVDGLVMVLLGGIQTLAGPVVGAVTFTWLHDTVARNTDYW- 594 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I L LV+L + Sbjct: 595 -------------RAMLGAIILILVLLF-PQGIAG 615 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 100/306 (32%), Gaps = 17/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--IWLLI 96 + + + A GLS++ G +++ + +G Y L + G + W + Sbjct: 10 LLNGLAGASSLFLVAAGLSLIFGVTRIVNFAHGSFFMVGIYVAYTLVEKLGSTLGFWPAL 69 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++A+ G G ++ + L+ + L+ + ++ G + Sbjct: 70 LIAALAVGVLGALIEVLLLRRIYKAPELFQLLATFALVLVIKDAVLWLWGPDELLGPRAP 129 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + ++++ + + L L RT R + Sbjct: 130 ----------GLKGSIEILGRQFPSYDLFLIVVGPLVLGLVWLLLTRTRFGTLVRAATQD 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + + FA+ + G+ GA + +V++G Sbjct: 180 REMVSALGVNQAWLFTAVFALGALLAGLGGALQLPREPA--TLEMDLNTIGAAFVVVVVG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL A ++ E+ + + D SF+ + + + +V++ R Sbjct: 238 GMGSLPGAYVAALLIA---EIKAVCIWLGVVQIFGVDVSFSKLTLMVDFLVMAIVLVWRP 294 Query: 337 HSLLRL 342 L Sbjct: 295 WGLFGR 300 >gi|239621645|ref|ZP_04664676.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515520|gb|EEQ55387.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 362 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + ++ + + YI + + I ++ L++ +G LG L+L C A Sbjct: 16 FIGILAAFGIVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75 Query: 76 IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 IGAY + L + +++ G+++G+P+L+ GDYLAI T Sbjct: 76 IGAYVAALTSKYMVAAGIAIDPTARFLLTTLIGGVVACVFGILIGIPALRLHGDYLAIIT 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ K L + + I YV Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIERTANLYV 177 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++ ++ R+ A + IRD++ A + + K+ FA+S+ F G+AG Sbjct: 178 VFWIMVVTVVVLFMFGRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 237 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA ++P M + +I + +V+ GGM SL+ + L + EL Y Sbjct: 238 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 295 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L LV++ R + S Sbjct: 296 -------------RMLTYSVVLVLVMIFRPQGIFGSWEFSL 323 >gi|300813904|ref|ZP_07094208.1| amino acid or sugar ABC transport system, permease protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511967|gb|EFK39163.1| amino acid or sugar ABC transport system, permease protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 331 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 71/340 (20%), Positives = 142/340 (41%), Gaps = 45/340 (13%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + LL + ++ +Y ++ + I ++ A L+I VG+LG ++L Sbjct: 9 YILAFLLLIGLYGIILFLNRQGIVNRYSLTVLRMVAINIILATSLNITVGNLGQITLGHA 68 Query: 72 IAYAIGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +IGAYS + L + ++ G+I+GLP+L+ +GDYLAI TL Sbjct: 69 GFMSIGAYSAALFAKSAIVPGMAGYILSLFFGGFVAFIFGIIIGLPALRLKGDYLAIVTL 128 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + +LI++ T G G+ + ++ Sbjct: 129 AFGEIIR-VLIEYFNFTGGAQGLSGIPMMKSFD-------------------------II 162 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + +++ + T A +IR+++ A + + F K AF++S+ F G+AGA Sbjct: 163 YVIMIICVTLMYSVMTTRHGRAVLSIREDEIASEASGINVTFYKTFAFSLSAFFAGLAGA 222 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + I +F ++++ ++ +V+LGGM S + + +L + E+ Y Sbjct: 223 IYAQNIGVIDAKIFDYNKSFDILVMVVLGGMGSFTGSVISATVLTIIPEILRSFASY--- 279 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L ++++ R LL + S Sbjct: 280 ------------RMVIYSLVLIVMMIFRPVGLLGRKEFSL 307 >gi|254466730|ref|ZP_05080141.1| inner-membrane translocator [Rhodobacterales bacterium Y4I] gi|206687638|gb|EDZ48120.1| inner-membrane translocator [Rhodobacterales bacterium Y4I] Length = 358 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 74/344 (21%), Positives = 140/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y + L + F + + + +++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYVVLA------VAFGIIPFLINDYWANAILLPFLIYSIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAYS ++ + +S+++ + ++ I+ ++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYSCYKLMTAFPEVSMFIHVLLAGGITAGVCVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDTFGIIITGPNAPAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L + A + L R W IRD A + + AK++AFAVS FI Sbjct: 185 TYLFCLIFLTVCALVARNLTRGTQGRTWMAIRDMDIAAEIIGVNPLKAKMTAFAVSGFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F +++ +V+ +VILGG+ S+ A L+ + + Sbjct: 245 GISGALFFAVYLGAVEVGEAFGINKSFLVLFMVILGGLGSIFGSFAGAAFLVLLPVVLKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + F ++ + + ++ H + +L Sbjct: 305 VGVDILGWPTDIVAHF---QLVIVGALIIVFLIAEPHGMAQLWR 345 >gi|254469537|ref|ZP_05082942.1| ABC transporter permease protein [Pseudovibrio sp. JE062] gi|211961372|gb|EEA96567.1| ABC transporter permease protein [Pseudovibrio sp. JE062] Length = 526 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 100/320 (31%), Gaps = 18/320 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 L ++ + I + ++ A GL+I G +G++++ IGAYS ++ Sbjct: 225 LAFWETGQNIWYGLSLGSVLLLAAIGLAITFGVMGVINMAHGEIVMIGAYSTFVVQDLIR 284 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 S S I+ + ++ + + +L W + Sbjct: 285 TSFPEAFEYSLAIALPAAFFVSGVVGLALER--SVIRFLYGRPLETLLATWGVSLMLQQA 342 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 I F + +++L+ F+ A +++ L+RT Sbjct: 343 IRSIFGPTNQEVGNPDW-MSGAFELGGLTLIANRFWILVFALFVFAVLLVVLKRTHFGLQ 401 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + N+ S+ + FA+ S G+AG A S+ I Sbjct: 402 MRAVTQNRGMAASMGIRTPWVDAFTFALGSGIAGIAGV--ALSQISNVSPNLGQLYIIDS 459 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +V+ GG+ +L L + + +L A+ Sbjct: 460 FMVVVFGGVGNLWGTLVGAMSLGVANKFLEPYSGAVLAKILTLT-------------AII 506 Query: 330 LVILMRSHSLLRLRTPSNFL 349 L I + L L+ + + Sbjct: 507 LFIQKKPRGLFALKGRAVEV 526 >gi|254504634|ref|ZP_05116785.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222440705|gb|EEE47384.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 318 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 124/309 (40%), Gaps = 24/309 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 Y +G + + + GL I++G G +SL IGAY+ + G+ Sbjct: 23 FFPSGYYYRVGALVFVNALSVVGLVILIGYAGQISLGHAGFAGIGAYACALAPVHLGIPP 82 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 L I + A IS +++G P L+ +G YL +ATL + +L + +T G G+ V Sbjct: 83 VLAILLGAAISAVLALLIGRPILRLKGYYLGVATLGFGILVSMVLSNERGLTGGPDGMAV 142 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 L R + F Y I L L ++A A R Sbjct: 143 PS---------LGLRPLLRDMGLRLSGGEFWYIFNAAALLTGIWIALNLYQSATGRAMRA 193 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 + ++ A ++ + KL AF +S+ + + G+ A I+PD+ F ++ ++++ Sbjct: 194 LHGSETAAQTVGIDVSRFKLQAFIISAVYASVGGSLLALQNGFITPDVAGFMHSVEMVTM 253 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 +LGG+ S+ A+L + ++ + Y ++ + + LV+ Sbjct: 254 AVLGGVGSVLGATFGAAVLTLLPQILTVFHDY---------------EHLVLGLVMILVM 298 Query: 333 LMRSHSLLR 341 + LL Sbjct: 299 IFLPLGLLP 307 >gi|256828800|ref|YP_003157528.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256577976|gb|ACU89112.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 321 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 73/325 (22%), Positives = 131/325 (40%), Gaps = 29/325 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ + + + Y ++ I ++ M A GL ++VG G +SL Y + Sbjct: 7 MIWLAAFFGVLMLAPTLLPNNYYLTILILGCLHAMNAVGLCLLVGHAGQISLGHAGFYGL 66 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ L + GLS+ L + ++ +++GLPSLK +G YLA+ATL I + Sbjct: 67 GAYTTSYLSTTVGLSVGLSMLAGVGLTAIVAVLVGLPSLKLKGHYLAMATLGFGIILSIL 126 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + IT G +G RL G +R + ++ ++ + L Sbjct: 127 FTETVDITGGPSGFVGIPRLSLFGWELRKD--------------VTLFRLVAVILCLFVW 172 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L + + A R + +++A ++ I KL F +S+AF G AG +A I Sbjct: 173 LSFNLLHSRVGRALRALHTSERAAEAMGVDIANYKLLVFVLSAAFSGFAGVLYAHYLTFI 232 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P F F ++ +I +V+LGGM S+ + + E Sbjct: 233 APSSFGFMFSVELIVMVVLGGMISVPGAIVGAFFITVLPEFLRAFE-------------- 278 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 L L L ++ + Sbjct: 279 -NIEVLLFGAILVLCMMFLPDGMAG 302 >gi|83647207|ref|YP_435642.1| branched-chain amino acid ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83635250|gb|ABC31217.1| ABC-type branched-chain amino acid transport system, permease component [Hahella chejuensis KCTC 2396] Length = 417 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 93/340 (27%), Gaps = 33/340 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L A Y ++ + L Y + A + ++ G G+LSL +A+G Y+ + Sbjct: 37 LTMTPGSALHVSTYTVTLLGKYLCYALLALAVDLIWGYCGILSLGHGAFFALGGYAMGMY 96 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 R + LP D A L+++ + + + Sbjct: 97 LMRQVGDRGVYGDPLLPDFMVFLNWKELPWYWHGFDNFGFAMLMVALAPGLLAFVFGWLA 156 Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + D + + F ++ Sbjct: 157 FRSRVTGVYLSIITQALTYALMLAFFRNDMGFGGNNGLTDFKDLLGFNLQSDATRCGLFI 216 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 L + + + + +RD + L + KL F VSS G+A Sbjct: 217 ASAVALMLGYVLCRRIVNSKLGRVLVAVRDAEARTRFLGYRVDKYKLFVFVVSSVLAGIA 276 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA + I+P F +I +I V +GG +L + G Sbjct: 277 GALYVPQVGIINPGEFSPINSIEIIIWVAVGGRGALYGAVIGAIAVNYAKSYFTG----- 331 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +F + + L L+ L Sbjct: 332 ---------AFPELWLYCLGALFVVTTLFLPKGLVGLFER 362 >gi|227872325|ref|ZP_03990680.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] gi|227841832|gb|EEJ52107.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] Length = 352 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 138/343 (40%), Gaps = 24/343 (6%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M ++ K + + ++ ++ LFL + + + + + IY + A L++VV Sbjct: 1 MKNVQMKKIKDIFLNYGVILIVYFVVQLFLKSGSVSSLMKGLLVPLCIYSILAISLNLVV 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLP 113 G G LSL +GA+ L ++ + + A+ +G G ++G+P Sbjct: 61 GISGELSLGHAGFMCVGAFFSASCSMLLKGSSLPPMLIFFIALCIGAISAGFFGFLIGIP 120 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L+ +GDYLAI TL EI +NI+ + + + Sbjct: 121 VLRLKGDYLAIVTLAFGEIIKNIINALYFGVDKNGWHFSLKDGTAVALGEGGKWIIKGAQ 180 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + V + + LS I + A IRDN+ A S+ KL Sbjct: 181 GITGTPKYSNFTVGIILLLLSMLFIQHFIHSRTGRAVMAIRDNRIAAESIALPASKLKLL 240 Query: 234 AFAVSSAFIGMAGAFFAASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F +S+A G+AG +A + + P F ++++I+++ V+LGG+ ++ A +L Sbjct: 241 CFTISAAIAGIAGVLYAHNLSSLQALPKNFGYNQSIMILVFVVLGGIGNMRGSILAAVVL 300 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + EL +N Y + + L +++L Sbjct: 301 TLLPELLRSLNDY---------------RMLIYAVVLIVMMLF 328 >gi|91786264|ref|YP_547216.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91695489|gb|ABE42318.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 311 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 116/284 (40%), Gaps = 15/284 (5%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 + QKY+ + +I+ + A L +++G GLLS+ +GAY+ IL + Sbjct: 3 AIPLFIQQKYLLHVISLAMIFGIAALSLQLLLGFTGLLSMGQAAFLGVGAYTAGILAVKL 62 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + + ++SG +I+ +P + +G YL++ATL + + + + +T G Sbjct: 63 QYPFLVCFVAAGVVSGLISLIL-VPITRLKGVYLSVATLGFTIAIHLVFLNEEWLTGGSQ 121 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ + +YY+ L + S + L + Sbjct: 122 GLSSIPPPAIGSLAIGGEQ--------------GIYYLCLAVAIGSFAAFHLLVSSRFGR 167 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A + I+ ++ A + + K AF ++ F G AGA F ++P+ F F ++I Sbjct: 168 ALQAIKLDEDAARASGINVTLYKSQAFVTAAVFTGWAGALFTYHNQYLNPNDFTFWKSIE 227 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 ++ +V +GG+ SL+ + + E+ + Y Sbjct: 228 IVIMVAVGGIGSLAGAVFGAFAVTLLPEVLGDLENYRMIIFGSL 271 >gi|291563028|emb|CBL41844.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [butyrate-producing bacterium SS3/4] Length = 358 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 80/329 (24%), Positives = 145/329 (44%), Gaps = 23/329 (6%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V +++ + +G + + + IYV+ A L++ VG LG LSL Sbjct: 15 ITLGMVVAAWIIMEVLMGTGHVSSLLKGLLVPFCIYVIMAVSLNLTVGILGELSLGHAGF 74 Query: 74 YAIGAYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +GA+S + +S+ + I V A ++ G+++G+P L+ RGDYLAI TL Sbjct: 75 MCVGAFSGALFSKCMKGTIDPTVSLVIAIFVGAAVAAVFGILIGIPVLRLRGDYLAIVTL 134 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI +N++ + LG + + + + Sbjct: 135 AFGEIIKNLVNAIFLGRDADGFHISFKDSMSLGLKDGGEVLIKGPQGITGTPQAATFTIG 194 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + ++ I++ L + A +IRDN+ A S+ I KL AF++S+A G+AG Sbjct: 195 IILVLITLIIVMNLVNSRTGRAIMSIRDNRIAAESIGINITKYKLLAFSISAALAGVAGV 254 Query: 248 FFAASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 +A + ++ P F ++ +I+++ V+LGG+ S+ +T IL + EL G+N Y Sbjct: 255 LYAHNLTTLTALPKNFGYNMSIMILVYVVLGGIGSIRGSVISTVILYLLPELLRGLNNY- 313 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + I L L +L Sbjct: 314 --------------RMLIYAIVLILAMLF 328 >gi|71281258|ref|YP_270089.1| putative branched-chain amino acid ABC transporter permease [Colwellia psychrerythraea 34H] gi|71146998|gb|AAZ27471.1| putative branched-chain amino acid ABC transporter, permease protein [Colwellia psychrerythraea 34H] Length = 357 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 64/343 (18%), Positives = 135/343 (39%), Gaps = 27/343 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF + ++ I ++A+ + Y ++ IQI + A GL+I+VG Sbjct: 21 TIFETKTIRWVTIFTIIALCFA--------PLVVDGYFITLLIQISYLGIAALGLNILVG 72 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +SL + GA++ L + + ++L IP++ ++ GM+ G P+ + +G Y Sbjct: 73 YTGQISLGHGAFFGFGAFASAWLNTSLHIPVFLCIPLAGFLTMGVGMMFGAPAARIKGLY 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAIATL I ++ + + G +G F Sbjct: 133 LAIATLASQFIIEDFFARADWFSGGASGSMAEPVSLFGFAFDTDQ--------------- 177 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 YY+ L L R+ A+ +RD+ + + + +L +F +SS + Sbjct: 178 SFYYIALFSLVFMFIWGCNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFY 237 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG- 300 G+ GA +A +S + F +I ++++I+GG+ S+ ++ + E+ Sbjct: 238 AGIGGALYAHYLGYVSAEGFTIMMSIQFLAMIIIGGLGSIKGTLMGVIFMVFLPEVLESG 297 Query: 301 ---MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 M + ++ + + + ++ + Sbjct: 298 VGVMKMTDWGNIPMVVDGLAYIKEMAIGLVIIGFLIFEPEGIA 340 >gi|159184748|ref|NP_354418.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium tumefaciens str. C58] gi|159140036|gb|AAK87203.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium tumefaciens str. C58] Length = 590 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 119/326 (36%), Gaps = 22/326 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V L L + ++ I + + A GL ++ G G+ S GAY Sbjct: 10 AVAALFLVAIFPLLPVPPFWVTLANNIGLASLVAIGLVLLTGVGGMTSFGQAAFCGFGAY 69 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L S YG S WL +P+S ++ + +GL +++ G YL + T+ + + Sbjct: 70 TTAVLTSAYGFSPWLTLPLSLLVGAVVALPLGLMTVRLSGHYLPLGTIAWGLAIYYLFGR 129 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + + GI L ++ +YY++ A Sbjct: 130 IELL-GRYDGISGIPPLS--------------LGGEALMSSSSIYYIIWIFVIAVAIGAQ 174 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + + R +R +A + I AKL+ F ++ ++G +A + I+P Sbjct: 175 NLLDSRVGRGIRALRGGSQAAEAFGVNIERAKLTVFVFAAVVAALSGWLYAHMQRSINPT 234 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F I + + ++GG + ++++ + E+ + + + F Sbjct: 235 PFGLDMGITYMLMAVVGGSGRVVGAIFGASVVLVLKEVLQRVLPGLLGTSVNF------- 287 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTP 345 + + L L++ + L L Sbjct: 288 EMIVFGVLLVLILQLSRDGLWPLLER 313 >gi|293606117|ref|ZP_06688482.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292815572|gb|EFF74688.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 345 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 17/322 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L L L + Y + + I + A GL+I+ G GL+SL +GA Sbjct: 24 VWLALLAASLVLFPFVADAYWLYLACLVAINIASATGLNILTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ ++ R G + + + +++ G+++G+PSL+ +G YLAIAT+ S I I Sbjct: 84 YTVAVMELRPGTPVLVNLLGGGVVAMVGGLLVGIPSLRVKGLYLAIATIAASFIAHFIFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W+ RL + +Y++++ + L Sbjct: 144 NWQFTGGTTGLQVPPARL----------------LGVDLDTSFKIYWLIVPVTVLMVLGA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT I A+ IRD + L ++ KL +F +SS + G+AG +A ++P Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++ +I+GGM S+ + V EL + + + Sbjct: 248 ESFPLIMSIFFLAAIIVGGMGSILGAILGAIFMTMVPELLK-LIVGWLPVGGDALRLVSP 306 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 T + + + ++ H L Sbjct: 307 VRTIVFGLLIVGFLIFEPHGLA 328 >gi|315638172|ref|ZP_07893354.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] gi|315481708|gb|EFU72330.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] Length = 350 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 118/335 (35%), Gaps = 7/335 (2%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++ L F+F+ Y S+ QI I+++ A +++ G G SL A+G Sbjct: 10 LIFLFLALAFIFISPKIFSDYGMSIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAVG 69 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY ++ + + + L L F Sbjct: 70 AYVAALVLLSTEAKEEQFFYDG-INPFILALHSPSFIVALLAAGLCACLLSFILSFAVFR 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 ++ + G + +L L + I Y G+ ++ + Sbjct: 129 VRGDYLAIVTLGFGIIIKLLALSFPTFTN----GSRGINEIPAYSNIYWTGGIAIIAVML 184 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 IL + + A + IRD++ A ++ + K AF S+ G+ G A +S Sbjct: 185 ILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFGTSAFLEGVGGGLLACLLTTVS 244 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL--KFDCS 315 P+ F F ++ I++LGG+ S + + ++IG E ++ + L + Sbjct: 245 PEQFDFLLTFQLLIIIVLGGLGSTTGAILGSVLVIGGAEWLRFLDEFKIQMDLFGAEIQT 304 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + L LV+L ++ + + Sbjct: 305 GHGLRMVVFSLILILVMLFARRGIMGDKELVEIFK 339 >gi|119025088|ref|YP_908933.1| branched-chain amino acid ABC-type transport system permease components [Bifidobacterium adolescentis ATCC 15703] gi|118764672|dbj|BAF38851.1| branched-chain amino acid ABC-type transport system permease components [Bifidobacterium adolescentis ATCC 15703] Length = 489 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 28/305 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I L+ + + G+++V G+ GL S + +G + + + + +I Sbjct: 209 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAYVGTQMLHMPLIASAIFAIVI 268 Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 G I R + +I++ L G + Sbjct: 269 GALTGFIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 321 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 F + ++ L + + L+L +T + A R + DN Sbjct: 322 -----KSVPDSFQLGPITTDMPTLVSALIAICVIVGVTLFLYKTRLGRATRAVSDNAALA 376 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + + +S A ++G + IS + + +++ + V LGG+ + Sbjct: 377 AASGINVDQVVRVVWILSCAMAALSGVLLGVYLNGISWNT-GATLILLMFAAVTLGGLGT 435 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + ++ V ++ + N + L +V+L+R + Sbjct: 436 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 482 Query: 341 RLRTP 345 + Sbjct: 483 GKQQR 487 >gi|119717238|ref|YP_924203.1| inner-membrane translocator [Nocardioides sp. JS614] gi|119537899|gb|ABL82516.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Nocardioides sp. JS614] Length = 330 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 63/329 (19%), Positives = 132/329 (40%), Gaps = 8/329 (2%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 G+ +Q + G ++Y + A GL++ G GLL+ A+G Y+ + + +G Sbjct: 3 FGSILTQTLQQAFGPLAIVYCLAAIGLNVHFGYTGLLNFGQAAFMAVGGYAMASVVATWG 62 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IKWKPITNGK 147 LS+WL I V +++ +++G+P+L+ R DYLAI T+ +E+ + + + G+ Sbjct: 63 LSLWLGIVVGLVLTVVLALLLGVPTLRLRADYLAIVTIAAAEMLRQTVGSVTLLEYFGGQ 122 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ + + + + ++ V + LS ++ L R+ Sbjct: 123 DGLNSFVGDFRALNPYSGSVGIPGI-VEWRANDFWVMTVGWILVALSCLVVWALMRSPWG 181 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 + IR+++ A SL + K+ + + F AG + S+ + P + Sbjct: 182 RVLKAIREDEDAVRSLGKNVYSYKMQSLVIGGLFGTFAGYIYGLSKAAVIPTDYATDTTF 241 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGM-----NFYYFNSLLKFDCSFNMRHTT 322 +I++LGG + T I G++ + + Sbjct: 242 FAYTILLLGGAARVFGPVVGTVIFWGLINFLDQFFRQAAAHDVIPQAIMNQNQAGLMRFI 301 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ +AL L+++ R + R R Sbjct: 302 VLGLALMLLMIYRPQGIFGDRRELAIDGR 330 >gi|118589404|ref|ZP_01546810.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Stappia aggregata IAM 12614] gi|118438104|gb|EAV44739.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Stappia aggregata IAM 12614] Length = 540 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 88/297 (29%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY ++ S L S I+ + Sbjct: 261 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFVVQEFIRSSAPGLFEYSLFIALPLAFLTS 320 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + Sbjct: 321 GLVGVAIER--GVIRWLYGRPLETLLATWGISLVLQQAVRSIFGPTNREVGNPDW-MSGA 377 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + A ++L L++T R + N++ S+ + Sbjct: 378 FEIGQMTITYNRMWIIVFAMLVFAGLMLVLKKTPFGLYTRAVTQNRRMAASMGIRTPWID 437 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ I +V+ GG+ +L L Sbjct: 438 AFTFGLGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAMTL 495 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 V + +++ + L I R L L+ + Sbjct: 496 GVVNKFLEPYAGAVLGK-------------IFVLVFIILFIQKRPRGLFALKGRAVE 539 >gi|27376167|ref|NP_767696.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27349306|dbj|BAC46321.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 332 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 76/324 (23%), Positives = 130/324 (40%), Gaps = 30/324 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A+ ++ L + +Y + Q + + A GL++ +G G +SL IG Sbjct: 10 IALGLIVIAGLIIVPMNFNRYGLFILSQWAVMTIAAMGLNLTLGYAGQVSLAQGAFVGIG 69 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ I+ + + + I V+ ++S G ++G P+L+ + YLA TL S + + Sbjct: 70 AYAAAIMTTHGWP-LPVAILVAIVLSFGVGWVLGYPALRVQHHYLAFVTLAFSTLAFLVF 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +T G GI R +F + YYV LG + + Sbjct: 129 RNESWLTGGIYGISNIPRPHFF--------------GIATNKPLPFYYVCLGSLAIVSLA 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + WL R+ A+ +R+N SL L AFA+ SA G+AGA +A I Sbjct: 175 VWWLIRSPWGRAFMALRENPLRAQSLGIDTRRYTLMAFAIGSALGGVAGALYAPLTQYID 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F S ++ ++ +VI+GG I + + E YY Sbjct: 235 PVPFNLSLSLDLLMMVIVGGAGFYFGPFLGAMIAVLLPEWLRFTEGYY------------ 282 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 L IA+ L+++ +L Sbjct: 283 ---LMLYAIAVMLLLIWSPTGILG 303 >gi|254488248|ref|ZP_05101453.1| inner-membrane translocator [Roseobacter sp. GAI101] gi|214045117|gb|EEB85755.1| inner-membrane translocator [Roseobacter sp. GAI101] Length = 399 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 123/365 (33%), Gaps = 34/365 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKS------QKYIDSMGIQILIYVMFAWGLSIVVGSL 63 K +L ++A + FL + + +++I+ +FA G +I+ G Sbjct: 7 KDAGLLAIVAFLCIFAPFLLNPFPEGSAMAQFNAGYPDLMQRLVIFGIFAIGFNILFGLT 66 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G LS +G+Y+ + + +++ I VS +++G +++G SL+ G Y + Sbjct: 67 GYLSFGHAAFLGVGSYAAIWMMKLLTMNVVPAIFVSVLVAGLFSLLVGWISLRRSGIYFS 126 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVA---------------DRLYFLGTTVRSLIR 168 I TL +++ + G + Sbjct: 127 ILTLAFAQMSYALAYSVLTPITGGETGLQPKYTDPRILDGALPAGQSPRANLFGLDMKAT 186 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 +V YY+ L+ + + + R+ + R ++ NQ+ Sbjct: 187 TELRLGDWVFTFNAGYYIAAATMLLAFYLSIRIFRSPLGMMLRAVKSNQQRMNYTGLNSK 246 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 L+AF +S + G+AG A ++ + ++ + V+ + ILGG +L Sbjct: 247 PYTLAAFVISGMYAGLAGGLLVAMDTQVGAERMFWTASGEVVLMTILGGAGTLIGPVLGA 306 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLVILMR 335 + + + +N F + + +V++ Sbjct: 307 GFIKYMENIVSKINETVLEQWFAFLPDGLSDAMVAIVYPFVGKGWHLTLGLLFMMVVIFL 366 Query: 336 SHSLL 340 L+ Sbjct: 367 PGGLV 371 >gi|227546614|ref|ZP_03976663.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|312134008|ref|YP_004001347.1| livm [Bifidobacterium longum subsp. longum BBMN68] gi|317482075|ref|ZP_07941099.1| branched-chain amino acid transport system/permease component [Bifidobacterium sp. 12_1_47BFAA] gi|322689788|ref|YP_004209522.1| branched-chain amino acid ABC transporter permease [Bifidobacterium longum subsp. infantis 157F] gi|322691734|ref|YP_004221304.1| branched-chain amino acid ABC transporter permease [Bifidobacterium longum subsp. longum JCM 1217] gi|227212931|gb|EEI80810.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|291516322|emb|CBK69938.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Bifidobacterium longum subsp. longum F8] gi|311773312|gb|ADQ02800.1| LivM [Bifidobacterium longum subsp. longum BBMN68] gi|316916434|gb|EFV37832.1| branched-chain amino acid transport system/permease component [Bifidobacterium sp. 12_1_47BFAA] gi|320456590|dbj|BAJ67212.1| branched-chain amino acid ABC transporter permease component [Bifidobacterium longum subsp. longum JCM 1217] gi|320461124|dbj|BAJ71744.1| branched-chain amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis 157F] Length = 362 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + ++ + + YI + + I ++ L++ +G LG L+L C A Sbjct: 16 FIGILAAFGIVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75 Query: 76 IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 IGAY + L + +++ G+++G+P+L+ GDYLAI T Sbjct: 76 IGAYVAALTSKYMVAAGIAIDPTARFLLTTLIGGVVACVFGILIGIPALRLHGDYLAIIT 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ K L + + I YV Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIERTANLYV 177 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++ ++ R+ A + IRD++ A + + K+ FA+S+ F G+AG Sbjct: 178 VFWIMVVTVVVLFMFGRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 237 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA ++P M + +I + +V+ GGM SL+ + L + EL Y Sbjct: 238 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 295 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L LV++ R + S Sbjct: 296 -------------RMLAYSVVLVLVMIFRPQGIFGSWEFSL 323 >gi|113866318|ref|YP_724807.1| ABC transporter permease [Ralstonia eutropha H16] gi|113525094|emb|CAJ91439.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 358 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 142/345 (41%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + V + F+ + S+ + ++ I LI+ + A GL+I+ G Sbjct: 18 QIFPIRQDR------IGFAVLMAVAFVAIPFVGSEYWFSAILIPFLIFSLAALGLNILTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GAY+ R L ++ + + G+ GLPSL+ +G Sbjct: 72 YAGQLSLGTAAFMAVGAYAAYNFQLRVEGMPVLLTFVMAGLSAALVGVAFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL L K+ +N + + + + Sbjct: 132 YLAVATLAAQFFVVWALTKFPWFSNNSSSGVI-------------TAQRLDLFGFAIDTP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +L + + A L R+A AW ++RD A + ++ KL AFAVSS Sbjct: 179 LKKYLFVLAIVTVLALAAKNLVRSATGRAWMSVRDMDVAAEVIGIPLMRTKLLAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 + G+AGA +A + PD F + V+ ++I+GG+ S+ A ++ + Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRVLFMIIIGGVGSILGSFLGAAFILLLPIFLD 298 Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342 + L + + H + + +++ H L RL Sbjct: 299 NVLPSLAALLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARL 343 >gi|319783758|ref|YP_004143234.1| urea ABC transporter permease [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169646|gb|ADV13184.1| urea ABC transporter, permease protein UrtB [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 537 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 99/319 (31%), Gaps = 18/319 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 L + + + + ++ A GL+I G +G++++ +GAY+ ++ Sbjct: 236 LAFWDAGQNVWYGISLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQQVIR 295 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 S L S +I+ ++ + + + +L W + Sbjct: 296 TSFPDLFDWSLVIALPLAFLVAALVGLIIER--GVIRFLYGRPLETLLATWGVSLILQQA 353 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + S F + ++L+ + ++ ++RT Sbjct: 354 VRSIFGPTNQEVGNPSW-MSGSFNVGQLAITWNRLWILVFALAVFGILLYVMKRTPWGLQ 412 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + N++ S+ + FA+ S G+AG A S+ I Sbjct: 413 MRAVTANRRMAASMGIRTPWVDALTFALGSGIAGIAGV--ALSQIDNVSPNLGRGYIIDS 470 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +V+ GG+ +L L V + ++++ + Sbjct: 471 FMVVVFGGVGNLWGTLVGAFSLGIVNKFLEPYAGAVLGK-------------IVVLVLII 517 Query: 330 LVILMRSHSLLRLRTPSNF 348 L I R L L+ + Sbjct: 518 LFIQKRPRGLFALKGRAVE 536 >gi|326333440|ref|ZP_08199683.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Nocardioidaceae bacterium Broad-1] gi|325948745|gb|EGD40842.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Nocardioidaceae bacterium Broad-1] Length = 446 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 97/309 (31%), Gaps = 14/309 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + + + LI + G S++ G+ GL + GA + + Sbjct: 150 QNLRAGIVFALILCLAGLGFSLIFGTTGLSNFAHGELLTFGAVMAWSFDQIFKTGGLASV 209 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V A + ++ + + + I I+ I Y Sbjct: 210 SVIVAGVIAVVLGGVGGYVQDKVLWGPLRRRGTGLIAMMIISIGLAIFLRYLFQYFYGSS 269 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + R + + +++ ++ LWL ++ + A R + DN Sbjct: 270 TRSLSQYNGQQREQHWYYLGLSLADREAVIVVIAIVTITAVCLWLAKSRMGKAMRAVSDN 329 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 S + +A+ + A +AG +A S + ++++ V LG Sbjct: 330 PALAASSGLRVDGVITNAWVIGGALTALAGVLYAMQLQVNSFMGMRILL--VILAAVTLG 387 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + ++ V EL + ++ + +++L+R Sbjct: 388 GLGTIWGALVGSMVIGLVYELGPLFGVPTSIKEIGP------------LLIMIVILLVRP 435 Query: 337 HSLLRLRTP 345 +L + Sbjct: 436 QGILGRKER 444 >gi|294339433|emb|CAZ87792.1| putative ABC-type branched-chain amino acid transport system, permease component [Thiomonas sp. 3As] Length = 354 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 77/339 (22%), Positives = 140/339 (41%), Gaps = 23/339 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ L L+ F+ + S + ++ + LI + A GL+++VG Sbjct: 18 QIFPIRQDR------LFIGAVLLIAFVAVPLLGSDYLLRALLVPSLILALAAIGLNVLVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY+ ++ G+ + + + ++ +I+ GM+ GLPSL+ RG Sbjct: 72 YCGQISLGTGAFMAVGAYAAFNLMVRLPGMPLLIALVLAGLIAALAGMVFGLPSLRIRGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL + +TNG + V + Sbjct: 132 YLAVATLAAQFFSDWVFAHVPWLTNGSSSGSVTAPQLQ-------------VFGFVIDSP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 I Y L + + A ++ L R W RD A + + + AKLSAFAVSS Sbjct: 179 IRKYLFCLAILSVLALLVKNLVRGRKGREWMATRDMDVAASVIGISPVRAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +G+AGA +A P F ++ ++ ++I+GG+ S+ A ++ + Sbjct: 239 IVGIAGALWAFVHLGSWEPAAFNIDLSLKLLFMIIIGGLGSVMGSLFGAAFIVLLPIFLN 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + L + + + L ++ H Sbjct: 299 RLLSFL--GLQASTSFISHLELMTFGVLIVLFLIAEPHG 335 >gi|288959300|ref|YP_003449641.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288911608|dbj|BAI73097.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 315 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 66/323 (20%), Positives = 122/323 (37%), Gaps = 30/323 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ + L A + + I + GL++++G G +SL + IGAY Sbjct: 12 LLALAAVIAVLPAFLPNNFYLDIAILAGFNAVVCVGLNLLIGYAGQISLGHAGFFGIGAY 71 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L YG L + A+ G ++ P L+ +G YLA+ATL + I +L Sbjct: 72 ASGVLVGSYGWPPVLALLAGAVFVGLLAFLVAKPILRLKGHYLAMATLGIGIIVSIVLRT 131 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 +T G G+ V FR + E Y+V+ + + L Sbjct: 132 ESGLTGGPDGMMVEP---------------FRIFGVELYGEKVWYWVVGLLLVGVVWLSL 176 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + + A R + ++ A + K+ F +S+ F +AG+ FA I+P Sbjct: 177 NLIDSPMGRALRAVHGSEVAAEVVGVDTARFKVLVFVLSAVFASVAGSLFAHYTGLITPA 236 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F ++I ++++V+ GGM S +L + + Y Sbjct: 237 KADFFKSIELVTMVVFGGMASTFGAVVGAVVLTLLPQALTVFQDY--------------- 281 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 ++ L ++ LL Sbjct: 282 QQIVLGGILMATMVFMPKGLLPT 304 >gi|291294540|ref|YP_003505938.1| inner-membrane translocator [Meiothermus ruber DSM 1279] gi|290469499|gb|ADD26918.1| inner-membrane translocator [Meiothermus ruber DSM 1279] Length = 358 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 126/316 (39%), Gaps = 21/316 (6%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + ++ + ILIY + GL+I G GL+S+ +GAY+ + Sbjct: 40 ILPLFLERSQVLVLNFILIYAIAVLGLNITTGYAGLISVGQAAFMGVGAYTVALSA--PS 97 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L WL IP+ + G I+G+PSL+ + YL +ATL EIF ++ + + G A Sbjct: 98 LPFWLTIPLGGFTAAIIGFIVGIPSLRVKHLYLVLATLAFQEIFVWVVGRSPALAQGAA- 156 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + F F + F YYV+L + L L R A Sbjct: 157 ------------IPVEMRNFLGLEIGFRNHNYFWYYVILFVLVLMVMAWRNLLRGKYGRA 204 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 +RDN +A ++ KL AFA+ + + G+AG A + + + F S ++ + Sbjct: 205 LIAVRDNDRAADAMGMDPGRTKLMAFALGAFYGGVAGGLLAYMQRAVVVEEFTLSRSVAL 264 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT------TL 323 +++ I+GG+ ++ A + + ++ + ++ + Sbjct: 265 LAMAIVGGLGTVVGSLLGPAFIEFLRLYVERLSEWMKSNAFIQSITPAGVDVASALLPLS 324 Query: 324 MVIALFLVILMRSHSL 339 + + L ++ L Sbjct: 325 FGLVIVLFLIFEPRGL 340 >gi|160941736|ref|ZP_02089063.1| hypothetical protein CLOBOL_06632 [Clostridium bolteae ATCC BAA-613] gi|158435233|gb|EDP13000.1| hypothetical protein CLOBOL_06632 [Clostridium bolteae ATCC BAA-613] Length = 328 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 124/287 (43%), Gaps = 14/287 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L++ FL Y + ++LI ++ GL+ + G G ++L +A+GA Sbjct: 12 FAVGALVIGAFLPIFIKNDYYMMVLNRVLINIIVVLGLNFITGLTGQMNLGTAGIFALGA 71 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 YS + L+ WL + + ++ G +G PSL+ RG YL++ T+ E+ + ++ Sbjct: 72 YSSALFTRYTNLTPWLGLIAAVIMGILIGRGLGYPSLRVRGVYLSLTTIGFGEVVRLLIS 131 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 T G GI ++S YY+ L ++ I Sbjct: 132 NTPKFTGGTQGIRNIRPYNIGSYQIQSQKEM--------------YYLFLVFTAIAFFIA 177 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + ++++RDN +A I K+ AF V+S F +AGA +A I+P Sbjct: 178 WRIAYSKWGRIFKSLRDNVEAVEMSGVDIASCKIKAFTVASIFGTVAGAMYAHYMGYINP 237 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 F + + ++++GG+ S+ +AI+ + E+ + YY Sbjct: 238 STFNLDLSTNYVVMLMVGGLGSVVGTIFGSAIVTILPEMLRFLGNYY 284 >gi|169350915|ref|ZP_02867853.1| hypothetical protein CLOSPI_01691 [Clostridium spiroforme DSM 1552] gi|169291977|gb|EDS74110.1| hypothetical protein CLOSPI_01691 [Clostridium spiroforme DSM 1552] Length = 311 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 69/329 (20%), Positives = 139/329 (42%), Gaps = 41/329 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + K I + ++ +L + + Y + + I ++ A L++ G LG L Sbjct: 3 KQFKKVGISFIGTILLYFILTFLISSGIISNYWLGIIMIAGINIILASSLNLATGYLGQL 62 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 +L ++GAY + L + + A+I+ G+I+G+P+L+ +GDYL I T Sbjct: 63 TLGHAGFMSVGAYVSALCSIHLELPFIASLLMGAIIAAIIGIIIGIPTLRLKGDYLCIIT 122 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L +EI + I++ ITNG G+ R + + Sbjct: 123 LAFNEIIRVIMVNL-SITNGSKGLVGIPRSTN-------------------------FAI 156 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + ++ +I + ++ A +IR+++ A + K+ AFA+S+ F G+AG Sbjct: 157 VFFSAAVTVFVIYSIVKSRHGRAIISIREDETASELSGIPTTYYKILAFAISAFFAGLAG 216 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A ISP +F +++++ ++ IV+LGGM + A ++ + E + Y Sbjct: 217 GLYAHYITVISPKVFDYNKSVEILVIVVLGGMGNWKGSIIAAIVMTILPEYLRAFSQY-- 274 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMR 335 L L + ++++ Sbjct: 275 -------------RMLLYAAILIIAMILK 290 >gi|159043951|ref|YP_001532745.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12] gi|157911711|gb|ABV93144.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12] Length = 402 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 127/368 (34%), Gaps = 35/368 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGAT-------KSQKYIDSMGIQILIYVMFAWGLSIVV 60 L K D +L L+ +L L + + + +I+ +FA G +I+ Sbjct: 4 LEKKDTVLLLIVAGLTMLAPFLLNPFPEGSGMAQFNAGYPDLMQRFVIFGIFAIGFNILF 63 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G LS +G+Y+ + + +++ I ++ +++G +++G SL+ G Sbjct: 64 GLTGYLSFGHAAFLGVGSYAAIWMMKLLTMNVIPAIIMAIVLAGLFSLLVGWISLRRSGI 123 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVA---------------DRLYFLGTTVRS 165 Y +I TL +++ + G + Sbjct: 124 YFSILTLAFAQMSYALAYSVLTPITGGETGLQPKVNDPRLLDPALAEGATPSANLFGLTM 183 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 + ++ YY+ + +S + + + R+ R ++ NQ+ Sbjct: 184 KSSYELNVGGWLFTFNAGYYLAAVIMLISFYVAIRIFRSPFGMMLRAVKSNQQRMNYTGL 243 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 L+AF +S + G+AG A ++ P+ ++ + V+ + ILGG +L Sbjct: 244 NSKPYTLAAFVISGMYAGLAGGLMVAMDTQVGPERMFWTASGEVVLMTILGGAGTLIGPV 303 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVI 332 ++ + + +N + F + I LV+ Sbjct: 304 LGAGMIKYMENIISKINETILHQWFAFLPDGMEDALVAMVYPFIGKGWHLTLGIIFMLVV 363 Query: 333 LMRSHSLL 340 + L+ Sbjct: 364 IFLPGGLV 371 >gi|150016638|ref|YP_001308892.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] gi|149903103|gb|ABR33936.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] Length = 352 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 45/349 (12%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A++ + L LF+ Y + IY + L+++ G GL SL A+G Sbjct: 10 IALIAIVFLLLFVANNSLDSYKIRILNLCAIYTVLGLSLNLINGFTGLFSLGHAGFVAVG 69 Query: 78 AYSYVILGS-------------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 AY+ +L + + + ++ ++S +++G P+L+ + Sbjct: 70 AYTTALLTMSEKVKNQNFFMEPLMAPFNHISVPFIVALLIAGLLSAFIAVLIGAPALRLK 129 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL +EI + ++ + +TNG G+ + Sbjct: 130 GDYLAIVTLGFAEIIRIVITNIQGLTNGALGLRGIPHMTN-------------------- 169 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 Y G+ ++ I+L L ++ A ++IR+++ A S+ ++ K+ FA+ Sbjct: 170 -----LYWSFGVAIVTIIILLSLINSSYGRALKSIREDEIAAESMGISLFKHKVIGFAIG 224 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + F G+ G I P+MFKFS ++ I+++GGM S++ + I+ + E Sbjct: 225 AFFAGVGGGLLGNLMGTIDPNMFKFSLTFNILLIIVIGGMGSVTGTVISAFIVTILGEAL 284 Query: 299 CGMNFYYFNSLLKFDCS-FNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 ++ L F S + I L +++L H ++ + S Sbjct: 285 RFLDMEKQFDLGIFSFSGIPGLRMVIFSILLMIIVLFFRHGIMGTKEFS 333 >gi|110632838|ref|YP_673046.1| inner-membrane translocator [Mesorhizobium sp. BNC1] gi|110283822|gb|ABG61881.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Chelativorans sp. BNC1] Length = 346 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 73/333 (21%), Positives = 129/333 (38%), Gaps = 30/333 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L L + Y + + +YV+ GL+I++G G + IGA Sbjct: 11 LIYGGLAAALLAVPLLTNGYTQYVVNLVTVYVVLGVGLNILLGYAGQFAFANAAFMGIGA 70 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y IL S+ GL W+ IP + +++ G +P+++ YLA+ T +E+ + I Sbjct: 71 YITAILSSQLGLPFWVCIPAAGVVTALIGTACAVPAMRMASIYLALVTFAFAELMVWVFI 130 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 WK +TNG GI V+ F ++ + + Sbjct: 131 NWKGVTNGSNGIGVSAPDLFGYVFRGDQRLYYLLLPCCLT---------------MLWLA 175 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + ++ I ++ IR+++ + K+ AF +S+ F G+ GA FA + + P Sbjct: 176 SRILKSYIGRSFVIIRESEIVARCNGIDVSRTKMIAFGLSAFFGGVGGALFAYTVGLVLP 235 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F + +I I+IV+LGGM SL+ +L + E F Sbjct: 236 QSFGLFQLVIHIAIVVLGGMASLAGAIIGALLLTTLPEFLR---------------DFQS 280 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + AL +V + + T L R Sbjct: 281 LQEVMFGTALVIVAIFMPRGIAGALTRFGILPR 313 >gi|220925175|ref|YP_002500477.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060] gi|219949782|gb|ACL60174.1| ABC transporter related [Methylobacterium nodulans ORS 2060] Length = 586 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 108/306 (35%), Gaps = 22/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + ++ + + GL ++ G G++S + IGAY+ +L R GL WL + Sbjct: 24 PFWLTLLTYAGLSAIVVIGLVVLTGIAGIMSFGQAMFVGIGAYASALLSLRLGLPPWLTL 83 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + +G + +G +L+ G YL + T+ + F L G+ L Sbjct: 84 PAAVAAAGLAALCVGAITLRLSGHYLPLGTIAWTIAFFYALGNTDAF-GRFDGLAGLPPL 142 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +++++ L + L R A R ++ Sbjct: 143 TLF--------------GTPITSGPSLFWLVWLSLALCILLTRRLLRARAGRAIRALKGG 188 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 A + ++ AF ++ G++G + + I+P F + +I + + +LG Sbjct: 189 AVAAEAFGIDTGRTRIVAFTYAAMLAGLSGWLYVQVQRAINPTPFGLNASIEYLLMTVLG 248 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G S+ ++ + + + + F + + L++ Sbjct: 249 GAGSVWGGVFGATLVTVLKDQLQNVLPLLLGTQGNF-------EAIVFGLLFVLILQRAP 301 Query: 337 HSLLRL 342 L L Sbjct: 302 DGLWPL 307 >gi|157376266|ref|YP_001474866.1| inner-membrane translocator [Shewanella sediminis HAW-EB3] gi|157318640|gb|ABV37738.1| inner-membrane translocator [Shewanella sediminis HAW-EB3] Length = 357 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 131/326 (40%), Gaps = 19/326 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V + L Y ++ IQI + A GL+I+VG G +SL + GA Sbjct: 30 LVAILAIAAACLAPLVLDGYFLTLFIQISYLGIAALGLNILVGFTGQISLGHGAFFGFGA 89 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 ++ L + + + + L IP++ ++ A GM+ G+P+ + +G YLAIATL I ++ Sbjct: 90 FASAWLNTSFNIPVALCIPMAGFLTMAVGMMFGMPAARIKGLYLAIATLAAQFIIEDFFA 149 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + + G +G A YY+ L Sbjct: 150 RAEWFSGGSSGSMAAPVNLLGFEFDTDQ---------------SFYYIALFALVFMYIWG 194 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ A+ +RD+ + + + +L +F +SS + G+ GA +A +S Sbjct: 195 CNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFYAGIGGALYAHYLGYVSA 254 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG----MNFYYFNSLLKFDC 314 + F +I ++++I+GG+ S+ ++ + E+ M + + ++ Sbjct: 255 EGFTIFMSIQFLAMIIIGGLGSIKGTLMGVIFMVLLPEMLETGVGLMKYTDWGNIPMVTD 314 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLL 340 + + + L ++ L Sbjct: 315 GLAYIKEMAIGLVIILFLIFEPEGLA 340 >gi|313672857|ref|YP_004050968.1| amino acid/amide abc transporter membrane protein 2, haat family [Calditerrivibrio nitroreducens DSM 19672] gi|312939613|gb|ADR18805.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Calditerrivibrio nitroreducens DSM 19672] Length = 313 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 70/327 (21%), Positives = 133/327 (40%), Gaps = 29/327 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L + + + + ++ S+ I ++I + A L+I+ G G++SL Y Sbjct: 4 LNLFYLSFLAIAIVLFYIFVDNQFYKSILIYVMINAINASMLNILFGYTGVISLGQAAFY 63 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY+ IL +G + L I + +I+ ++G P+LK G YLA+ATL I Sbjct: 64 GIGAYTTGILTVHFGYNPLLTILIGIVIASFVAFVVGYPTLKLHGHYLAMATLGFGMIMY 123 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + ++ T G +G+ +L G ++ + +F Y + F+ Sbjct: 124 ILFNEFSDYTGGPSGLVGIPKLSLFGFSLDNEDKF--------------YVFISIFFFIF 169 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + ++ ++ +S + I++++ A S + KL F V +A + G+ FA Sbjct: 170 SILLELFDKSYMSYKLKFIKESEFASKSFGVNVSRVKLIVFVVVAAITSLTGSVFALYSG 229 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISP F +I + + +GG+ S+ +L EL Y Sbjct: 230 FISPISFNLKYSIDIFIMATVGGLGSIVGGTLGATMLTAFPELITNFEDY---------- 279 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + I L ++I+ + Sbjct: 280 -----EMIVYGILLLIIIMFFPQGIAG 301 >gi|218887838|ref|YP_002437159.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758792|gb|ACL09691.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 330 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 31/321 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + + + + Y + + I +Y + A L+I++G GL + YA+GAY Sbjct: 10 AGIAVVVAVLPLLLDPYWTDVFVSIGLYSVLALSLNIILGQAGLFHMGHAAFYAVGAYVT 69 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN-ILIKW 140 I + +G+ + +P + + + M++ P + RGDYL I T+ + EI + ++ Sbjct: 70 AIANTMWGVPVLWAMPFAGLAAALFAMVVARPIIHLRGDYLLIVTIGIVEIVRIALINNV 129 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G GI+ R G + + F YY++ S + Sbjct: 130 FGLTGGANGIFGISRPMLFGFKIAKPVHF--------------YYLVWAYVACSILLFRR 175 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + A I+++ A I KL AF + + + GM G +AA ISP+ Sbjct: 176 LENSRFGRALNYIKEDDTAAEGSGVNIASYKLWAFVLGAFWAGMTGTIYAAKMTIISPES 235 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F E++++ +IVILGG S + +LIG+ E F Sbjct: 236 FSFWESVVLFAIVILGG-GSNRGVLLGAFLLIGLPEFFR---------------EFASAR 279 Query: 321 TTLMVIALFLVILMRSHSLLR 341 +A+ ++++ R +L Sbjct: 280 MLAFGLAMVVMMIFRPQGMLP 300 >gi|39937081|ref|NP_949357.1| putative branched-chain amino acid ABC transport system permease LivM [Rhodopseudomonas palustris CGA009] gi|39650939|emb|CAE29462.1| putative branched-chain amino acid ABC transport system permease protein livm (liv-I protein m) [Rhodopseudomonas palustris CGA009] Length = 315 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 142/340 (41%), Gaps = 35/340 (10%) Query: 3 IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62 + + IL LAVV +L LF Y + + + + A GL+I++G Sbjct: 1 MMPNLFGRRSVILIALAVVMAVLPLLFP-----SSYYFRVASLVWVSALAAIGLNILMGK 55 Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL + IGAY+ I + GL+ L + V A++S ++G P L+ +G YL Sbjct: 56 AGQVSLGHAGFFGIGAYAVAIGPAHLGLNALLAVLVGALLSALLAFLVGRPILRLKGHYL 115 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AIATL + + ++ T G G+ V F S Sbjct: 116 AIATLGLGVLVAMVITTESGWTGGPDGMPVPKLSLFGWRISGSNTW-------------- 161 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y++ G+ + L L T A+R + D++ A + + KL AF +++ + Sbjct: 162 -YWITAGLLLIGTWFALNLDDTPTGRAFRALHDSEIAARTAGVHVERFKLQAFVIAAVYA 220 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 +AG+ A ++PD F ++ ++++V+LGG+ S+ A+L+ + +L Sbjct: 221 SIAGSALAMMNGFVNPDQAGFLHSVELVTMVVLGGLGSIVGSIVGAAVLVVLPQLLTVFQ 280 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 Y L+ + + + ++ ++ + Sbjct: 281 DY---------------EHFLLGLIIIVSMIFMRDGMVPM 305 >gi|291287421|ref|YP_003504237.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809] gi|290884581|gb|ADD68281.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809] Length = 315 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 136/323 (42%), Gaps = 31/323 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L L L ++ IY + A + IV+G G+ + + + +GAY Sbjct: 10 IILFTCLALFPLVDNPRWLTVITTFCIYSVVALSVDIVLGRAGMFDMGHALFFGLGAYIT 69 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKW 140 IL +G ++ + IP +I +++ P + RGDYL +AT+ M+ +F+ L Sbjct: 70 AILNVHFGYNVLVAIPFVIIIPAIIAIVISSPIVHLRGDYLLVATVGMNIVFEQALKNNL 129 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G GI+ + F F+ + +YY+ + + II Sbjct: 130 FGLTGGPNGIFGVNAEVFGF---------------FLDEPLPIYYIAFALLLFTLLIIRN 174 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L ++ + A ++++ A S+ F ++ AF++ +A G+AG F+ +SP+ Sbjct: 175 LEKSKVGRALHYVQEDSLASESIGINARFYRVFAFSLGAAIAGLAGFVFSIQYAAVSPEA 234 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F ++I +IV++GG S+ I T I+ + E+ F Sbjct: 235 FNFMTSVIFFAIVLVGGKASIPGILAGTFIMFVLPEVFR---------------EFATAR 279 Query: 321 TTLMVIALFLVILMRSHSLLRLR 343 + A+ L +++R + + Sbjct: 280 YFVFGFAMILSMILRPEGMFPAK 302 >gi|170692535|ref|ZP_02883697.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|170142191|gb|EDT10357.1| inner-membrane translocator [Burkholderia graminis C4D1M] Length = 360 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 66/338 (19%), Positives = 132/338 (39%), Gaps = 33/338 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L++Y +L L VV L L L G S+ ++L++ + A G ++++G GLLS Sbjct: 26 LHRYRFLLLALLVVCILPLTLRSG---------SLATEVLVFALAALGCNLLLGHTGLLS 76 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 I + +G+YS ++ ++ L + + + + ++ A ++G S++ RG Y + TL Sbjct: 77 FGQGIFFGLGSYSAGLVLTKAALPVPVALLAALVVGAAAAALVGWFSIRQRGTYFVMLTL 136 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++F + +T G G+ R +R F + Y + Sbjct: 137 AFGQLFYFLAYTTPELTGGDNGLLDIPRPA---------LRLFGHELIALTSPWQYYGFV 187 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + +++ + + IRDN+ ++ + KL AF +S A G+AGA Sbjct: 188 AVLFLIVFWLLMRVSHSVFGRTLLAIRDNEARAAAVGYDVKRFKLMAFVISGAVTGLAGA 247 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + + +++ + ++GG +L A + + + + Sbjct: 248 LHALMTGIAPLSNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRW-- 305 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L+ I L V L L L Sbjct: 306 -------------LLLLGIVLMAVSLYMQRGLWGLGER 330 >gi|22537720|ref|NP_688571.1| branched-chain amino acid ABC transporter permease [Streptococcus agalactiae 2603V/R] gi|76787286|ref|YP_330200.1| hydrophobic amino acid uptake ABC transporter permease LivM [Streptococcus agalactiae A909] gi|76799158|ref|ZP_00781341.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] gi|22534609|gb|AAN00444.1|AE014263_23 branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76562343|gb|ABA44927.1| hydrophobic amino acid uptake (HAAT) family ABC transporter, permease protein LivM [Streptococcus agalactiae A909] gi|76585488|gb|EAO62063.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] Length = 317 Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 78/335 (23%), Positives = 140/335 (41%), Gaps = 42/335 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + V+ LL+ + + Y + I I V+ A GL+++VG G SL Sbjct: 11 WLAIVVLDYLLISVLISMGIFNLYHIQIIETIGINVILAVGLNLIVGCSGQFSLGHAGFM 70 Query: 75 AIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 AIGAY+ I+G + + I V +++G + +G+P+L+ +GDYLAIATL ++EI Sbjct: 71 AIGAYAVAIIGVKMPTYVGFLIAILVGTLVAGGIALGVGIPTLRLKGDYLAIATLGVAEI 130 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +L+ ITNG AGI + ++ G+ Sbjct: 131 IRILLVNGGDITNGAAGIMGIPPFT-------------------------TWSLVYGVAV 165 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 +S + + R+ + IR+++ A S+ K+ F + +AG+ A Sbjct: 166 VSLILAMNFLRSPLGRNTIAIREDEIAAESMGVDTTKVKVIVFVFGAILASIAGSLQAGY 225 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + P F F ++ V+ IV+LGG+ S++ A +L + L Sbjct: 226 VGTVMPKDFSFMMSVNVLIIVVLGGLGSMTGTVLAAILLGLLNMLLQDY----------- 274 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL L+++ R LL + + Sbjct: 275 ----ASVRMIIYALALILIMIFRPSGLLGTKELTL 305 >gi|292655064|ref|YP_003534961.1| putative branched-chain amino acids ABC transporter permease [Haloferax volcanii DS2] gi|291371552|gb|ADE03779.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] Length = 393 Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 126/338 (37%), Gaps = 3/338 (0%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 I +L V+P + + + S+ ILI+ +FA G +++G GLLS Sbjct: 35 GITAILVAVFPYIFARAPVVSGVLQGYQSLATLILIWGIFAIGFDLLLGYTGLLSFGHAA 94 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 + AY+ I+ +++ + + ++G SL+ G Y +I TL +++ Sbjct: 95 FWGGAAYAAGIVAKNVSGDPIVMVVSGTLFAVLLAWVLGFLSLRRSGIYFSILTLAFAQM 154 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 F + G + + ++ ++Y + Sbjct: 155 FYYMAASPLAFL--TNGENGLTGVEVGSFLGVIHLEADIPSVGGMLLGTWLYAFVGAFFV 212 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + ++ + + +R IR+N++ + + KL AF +S AF G+AG+ F Sbjct: 213 GAVAVAYRILNSPYGMVFRAIRENEQRAEFVGFNVWRYKLMAFIISGAFAGIAGSLFTIH 272 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLK 311 + ++E+ ++ + +LGG S+ + + + + + + + Sbjct: 273 GAYVPLQSLFWTESGDIVVMTVLGGAGSMFGPVLGVGLYLYIENIVSTIQALTIPFTGIV 332 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 F L+ + +V+ + L + T L Sbjct: 333 LVRDFGFYWHLLLGLVFVVVVWVVPDGLWGILTRLREL 370 >gi|284042128|ref|YP_003392468.1| inner-membrane translocator [Conexibacter woesei DSM 14684] gi|283946349|gb|ADB49093.1| inner-membrane translocator [Conexibacter woesei DSM 14684] Length = 325 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 133/326 (40%), Gaps = 7/326 (2%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 + L G + +G+ IY +F GL + VG G+++ AIGAY+ Sbjct: 5 AVPFALSFGGLTEVSFWTGVGVLAGIYALFTLGLQLNVGFSGIVNFGQAGFMAIGAYAMA 64 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 IL G + + ++ + + A +++G+ SL+ R DY +IATL +E + Sbjct: 65 ILVVDAGFAFFPAALLAILCAVAFALVVGMSSLRLRADYFSIATLAAAEAIRMFAQNATS 124 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G GIY D ++ + + + V+ + ++ L+ Sbjct: 125 LTGGNQGIYGYD-STWVDISRTIEGWLGDLGVGDGGGLVPLLLVVWAFVLVLVVVLRHLQ 183 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ R IR+++ A +L +L + A+S+A +AG F A + ++P F+ Sbjct: 184 RSPWGRVLRAIREDEDAARALGKNATSYRLQSLAISAALAAVAGIFLALNLSFVNPQAFE 243 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 I + +ILGG+ S +A ++ ++E +N D Sbjct: 244 PQATFIGYAALILGGLASYWGVAFGAVVMWTLLEASRFINLPLE------DTQIASLRFI 297 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNF 348 ++ + L L++ R + R Sbjct: 298 VVGLLLILLMAFRPQGIFGNRKEMVL 323 >gi|138895172|ref|YP_001125625.1| branched chain amino acid ABC transporter permease [Geobacillus thermodenitrificans NG80-2] gi|196248246|ref|ZP_03146947.1| inner-membrane translocator [Geobacillus sp. G11MC16] gi|134266685|gb|ABO66880.1| Branched-chain amino acid ABC transporter (permease) [Geobacillus thermodenitrificans NG80-2] gi|196211971|gb|EDY06729.1| inner-membrane translocator [Geobacillus sp. G11MC16] Length = 345 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 124/306 (40%), Gaps = 28/306 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y M I+++ +GL++ G G LSL +A+GAY+ IL + GL W Sbjct: 27 NGYYLHMMTMSFIWMIAVYGLNLFAGYTGYLSLAHAGFFAVGAYTLGILTVKVGLPFWGA 86 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +S + G+ +GL +L+ + + AI TL + I ++ KW +T G G Sbjct: 87 FALSCAFTSLLGLAIGLVALRTKEHFFAIYTLCVGYIIYLVIDKWDSLTGGVRGFIGIPA 146 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + YY++L F ++ L + + IR+ Sbjct: 147 PSD-------------IGPLSFQTPVAQYYLVLFFLFAVIFVMYRLVYSLTGRTYIAIRN 193 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + + KL++F +S F +AGA +A+ + PD+ + ++ +++ Sbjct: 194 SEELALTLGISTMKNKLASFVLSVFFTSLAGALYASFIRFLGPDIAYVTVMFDFLTYLLV 253 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ +L+ T ++ + + + Y + L L+I+ Sbjct: 254 GGIGTLAGPVVGTLLITFLSQQLQFLQDY---------------RMLIFGPVLTLLIIFY 298 Query: 336 SHSLLR 341 H + Sbjct: 299 PHGIAG 304 >gi|332530486|ref|ZP_08406427.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332040055|gb|EGI76440.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 606 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 101/334 (30%), Gaps = 29/334 (8%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + ++ + + L G Y+ ++ I+ + + A + I+ G G L+ Sbjct: 21 ARAASLHHVVLLAAMGAVLLVAGPWMFDTYLLNILIKAFFFAIAAITVDILWGYTGYLTF 80 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + IGAY+ + + G + + G + + Sbjct: 81 GQSAFFGIGAYAAGLTFTHAG----FSASTALLAMGTTLLGCAAVAGLVGWLSFYRGASP 136 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 ++++ L G + +F Y+ Sbjct: 137 FFATVISLVLPIVLTQ-----------LLLSGGSFTGSSSGLTGYPTFDGSIEAWYWAAG 185 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + ++ I L R+ IRDN+ L K + G+AG Sbjct: 186 SLLTVAGVIGWVLVRSDAGRMLLAIRDNEARCTYLGINTSRVKTTLLIAMGVMAGIAGFG 245 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 +++ ++P++ F+ +I V LGG +L + ++ Sbjct: 246 YSSFSGVVAPELTGFALGTELIIWVALGGRGTLWGPLASGVLVNVATAYLSS-------- 297 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 S ++ A +VI++ L+ L Sbjct: 298 ------SMPFAWQLILGAAFVVVIVLFPQGLIPL 325 >gi|57168886|ref|ZP_00368016.1| branched chain amino acid ABC transporter, permease protein [Campylobacter coli RM2228] gi|57019722|gb|EAL56408.1| branched chain amino acid ABC transporter, permease protein [Campylobacter coli RM2228] Length = 346 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 77/359 (21%), Positives = 131/359 (36%), Gaps = 47/359 (13%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L + + F+ L Y + QI IY+ A +++ G G SL Sbjct: 6 ISALVYIVLAIAFIMLAPQFFDGYGIGILNQIAIYITLAVSYNLINGVTGQFSLEPNGFI 65 Query: 75 AIGAYSYV--------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 A+GAY+ I+ + + S L + V+ + +I+ Sbjct: 66 AVGAYAAALVLLSSEQKLDLFSLEDPNPIILALHTNSFILALLVAGFSACVLSLILAFAV 125 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + RGDYLAI TL I Q + I + TNG G+ L Sbjct: 126 FRVRGDYLAIVTLGFGIIIQKLAINFPSWTNGSMGLNGIPLLSN---------------- 169 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 Y G+ +S +IL L + A + IRD++ A ++ + K A Sbjct: 170 ---------LYWTGGVAIISVILILNLVYSKFGRAMQAIRDDEDAASAMGVNTFWTKTLA 220 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F S+ G+ G +SP+ F F +++ I++LGG+ S + ++IG Sbjct: 221 FGTSAFLEGVGGGLLVCLLASVSPEQFGFEFTFMLLIIIVLGGLGSTTGAILGAILIIGG 280 Query: 295 VELCCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 E ++ L S + L LV+L + R ++F +R Sbjct: 281 REWLRFLDEMQIKIDFLGIDMGSMPGLRMVGFSLILILVMLFARREIFGDRELNSFFKR 339 >gi|197118568|ref|YP_002138995.1| branched-chain amino acid ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197087928|gb|ACH39199.1| branched-chain amino acid ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 320 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 130/320 (40%), Gaps = 29/320 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 L+ L S Y+ ++ + + + + A GL++++G G +SL + +GAY Sbjct: 9 FVFCLVVLLAPLPLSGSYLTNVLVFVGVNSILALGLNLLLGFAGQISLGQAAFFGLGAYG 68 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L S Y + W+ + V A+ A +G P L+ +G YLA+ATL + I + Sbjct: 69 SGVLTSAYAFNPWVAMVVVALAVAAFAFAIGFPVLRLKGHYLAMATLGVGVIANIAFNET 128 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G +G+ L T + ++ YY++ G + + L Sbjct: 129 VDLTGGPSGLSGIPNLAIGSFTFDTDLKN--------------YYLVWGFALVMILLALN 174 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + R I D++ A + K+ F +S+ +AG+ + ISP Sbjct: 175 LVNSRFGRGLRAIHDSEVAARVMGVNARLMKVQVFTLSAFISAIAGSLYCHVMTFISPTS 234 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F+ ++ +++++++GG+ S+ +L + E+ Y Sbjct: 235 FGFNTSVELLTMIVIGGLGSVYGSILGALLLTMLPEILRTFQDY---------------D 279 Query: 321 TTLMVIALFLVILMRSHSLL 340 + L ++ + L+ Sbjct: 280 IIVYGSLLIVMTIYMPGGLV 299 >gi|49474236|ref|YP_032278.1| high-affinity branched-chain amino acid transporter, permease protein [Bartonella quintana str. Toulouse] gi|49239740|emb|CAF26122.1| High-affinity branched-chain amino acid transporter, permease protein [Bartonella quintana str. Toulouse] Length = 352 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 116/339 (34%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K + L+ FLF Y + I I + A L+++ G G+ S Sbjct: 1 MTKSASTFLSCISILVLIGFLFYADNHFNDYTLRVINLIAINAILAISLNLIYGFTGMFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY IL ++ + I+ + + L A + Sbjct: 61 LGHAGFMAIGAYVCAILLLSPEQK--EMMWILEPIAEPLHYLQLPFFVAVVISGLCAAVI 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + + + G R+ T + + Y L Sbjct: 119 GLLVALPILRLGGDYLGIATLGFAEIIRIVITNATSLTNGSLGIKGIPQNATLWWNYGWL 178 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ R+ N R IRD++ A ++ F + +F V + F G+ GA Sbjct: 179 AFTVTFIVLLL----RSNAGNVLRAIRDDEIAAKTMGINAFFYRSFSFTVGAFFAGIGGA 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I P MF F ++ IV+ GG+ S++ ++ I+ ++E + + Sbjct: 235 LTAALISTIDPKMFNFLLTFNILMIVVAGGLGSITGSVISSVIVTAMLEWLRIIESPFDL 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + + L ++IL LL R S Sbjct: 295 GFIYIP-EIPGLRMVVFSLLLLVIILFWRKGLLGQREFS 332 >gi|56696726|ref|YP_167087.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56678463|gb|AAV95129.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 365 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 131/325 (40%), Gaps = 13/325 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + LL + + +LI+ + GL ++ G G SL A G Sbjct: 22 LGLYMILLAIVVAAPWLLDAFYLGELTNVLIWAIAGMGLMVLTGHTGQASLGHAAFLAFG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ VIL + P++ +I+G G + +P+L+ G YLAI TL +S + +I+ Sbjct: 82 CYANVILLEAGVP-FIIAFPLAGVITGLIGATVAIPALRLHGIYLAIFTLALSILVDDII 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + +P T G +G YVA I F + Y+++L + + A Sbjct: 141 VLSEPWTGGVSGKYVA------------GIDLFGLTIDRWGTPMLFYWLVLAVTVIVALG 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ + ++ +RD++ + ++ I AK +F +S G AGAF + Sbjct: 189 YINLLRSPLGRSFIAVRDSEVSAQAMGVDIARAKTISFGLSCMVTGWAGAFMGLFAGAFN 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + F +I ++ ++++GG+ S+ ++ + + Y + Sbjct: 249 NETFSVVISIELLMMIVIGGLGSIHGAFFGAIVIGFLPQFLSIAKEYVGAVFGGSTVAIP 308 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + + L IL+ + Sbjct: 309 GLEFGIFGMILIAFILLEPMGIYGR 333 >gi|121603907|ref|YP_981236.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120592876|gb|ABM36315.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 524 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 93/310 (30%), Gaps = 17/310 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I S I ++ A GL+I G +G++++ IGAY+ ++ + + Sbjct: 231 IFSGISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQKYLPGAFDW 290 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + ++ + + +L W + + Sbjct: 291 YLLAAVPVAFLASALMGAVLER--SVIRFLYGRPLETLLATWGISLMLQQLVRSIFGAQN 348 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +G + + ++ + + + RT + R + N+ Sbjct: 349 VGVENPVWMSGGVQVLGNLSLPYNRLVIIGFAIAVLLGMGWLIGRTRLGLFVRGVTQNRP 408 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + AFA+ S G+AG A S+ + +V+LGG+ Sbjct: 409 IASCMGVNTARIDTYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDAFMVVVLGGV 466 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L+ A L + + G +++ + + I R Sbjct: 467 GQLAGTVYAAMGLGILNKFLEGWTGAVLAK-------------IAVLVIIIIFIQKRPQG 513 Query: 339 LLRLRTPSNF 348 + ++ S Sbjct: 514 IFAMKGRSAE 523 >gi|260223447|emb|CBA34023.1| hypothetical protein Csp_B21960 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 496 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 93/310 (30%), Gaps = 17/310 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I S I ++ A GL+I G +G++++ IGAY+ ++ + + Sbjct: 203 IFSGISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQVLFQKYLPGAFDW 262 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + ++ + + +L W + Sbjct: 263 YLLAAVPVAFMTSALVGAALER--SVIRFLYGRPLETLLATWGISLMLMQLVRTLFGAQN 320 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +G S + + ++ + + + +T + R + N+ Sbjct: 321 VGVENPSWMSGGVQLLGNLSLPYNRLIIVAFAVAVLVGVWFLIEKTRLGLFVRGVTQNRP 380 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + AFA+ S G+AG A S+ + +V+LGG+ Sbjct: 381 IASCMGVNTARIDTYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGV 438 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L+ A L + + G +++ + + I R Sbjct: 439 GQLAGTVYAAMGLGILNKFLEGWTGAVLAK-------------IAVLVFIIVFIQKRPQG 485 Query: 339 LLRLRTPSNF 348 + ++ S Sbjct: 486 IFAMKGRSAE 495 >gi|269792251|ref|YP_003317155.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099886|gb|ACZ18873.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] Length = 347 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 57/335 (17%), Positives = 118/335 (35%), Gaps = 7/335 (2%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K ++ A + L LFL+ Y + I I + A L+++ G G+ SL Sbjct: 5 KKRDLILNGACLALLGLFLWWADGHLDGYKIQVLNLIAINAILAVSLNLIYGFTGMFSLG 64 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 A+GAY+ +L + I + + + + A + Sbjct: 65 HAGFMAVGAYTCALLILPPIQKEMIYILDPLIWPLSVMQAPFFVA--VLAGGIMAALFGL 122 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + + G R+ F + I + G Sbjct: 123 VIAMPVLRLGGDYLGIASLGFAEIIRVVFTNAKSVTN----GALGIKGIPPYANLWWNWG 178 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 ++ +++ L R+ N + IRD++ A ++ ++++F + + F G+ GA Sbjct: 179 WFLITLYVVVSLLRSNFGNCLKAIRDDEVASRAMGIDTFRYRVTSFTIGAFFAGVGGALM 238 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + I P MF F V+ IV+ GG+ S++ + ++ ++E + Sbjct: 239 GSLITTIDPKMFTFLLTFNVLMIVVAGGLGSVTGSVLGSVVITILLEWLRFVENPIDLGP 298 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + +AL +IL R ++ R Sbjct: 299 IHIP-GIPGMRMVIFSLALLFIILFRREGMMGQRE 332 >gi|119899733|ref|YP_934946.1| putative branched-chain amino acid transport permease [Azoarcus sp. BH72] gi|119672146|emb|CAL96060.1| putative branched-chain amino acid transport permease [Azoarcus sp. BH72] Length = 355 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 143/343 (41%), Gaps = 22/343 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + + F + +Q ++ ++ I +LI+ + A GL+I+ G Sbjct: 18 QIFPIRQDR------IGFAAILVFFFGVVPLVANQYWLQAILIPVLIFSLAAIGLNILTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GA+ R + + I + + + A G+ GLPSL+ +G Sbjct: 72 YAGQLSLGSAAFMAVGAFGAYNFMLRIDGMPFLVGIVLGGLCAAAVGVAFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL L+K+ +N + + + + Sbjct: 132 YLAVATLAAQFFIVWALVKFPWFSNHASSGVITAQRVEILGYAFD-------------SP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y + L + + A + L R+ +W +RD A + + AKL+AFAVSS Sbjct: 179 VSKYLLTLAVVAVLALLAKNLVRSTTGRSWMAVRDMDVAAEVIGIRPMHAKLTAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 + G+AGA +A + P+ F + ++ ++I+GG+ S+ A ++ + Sbjct: 239 YCGVAGALYAYTYLGTVEPEGFSLDLSFKILFMIIIGGVGSIMGSFFGAAFIVLMPIFLN 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + + + +++ H L RL Sbjct: 299 VVMHSVFGGAMPAGMG-SNLELIIFGGLIIFFLIVEPHGLARL 340 >gi|154245447|ref|YP_001416405.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154159532|gb|ABS66748.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 336 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 134/317 (42%), Gaps = 24/317 (7%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 L Y+ ++ I L+Y + +I+ G G +SL + + IGAY+ +L Y Sbjct: 37 LPLGIRDVYLQNVLILTLLYAAVSQSWNILGGYCGQISLGHALYFGIGAYAASVLYVNYD 96 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + W + V ++S A + +G + + +G Y AIATL+++EI ++ W G G Sbjct: 97 IVPWFGMVVGGLLSAALAVALGFMTFRLKGHYFAIATLVIAEIGLVLVHNW-DFVGGALG 155 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 I + F ++ +Y+ LG+ + + + + Sbjct: 156 IQWPFGTDSF------------WTLQFARDKVPYFYIALGLLVVVWLVTYLIENSRWGFW 203 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 WR ++D+ +A SL + +KL+A AVS+ F + G F+AA I P+ ++ Sbjct: 204 WRAVKDDPEAAESLGVEVFRSKLAAAAVSAFFTAVGGGFYAAFVSYIDPESVMSFRFSLL 263 Query: 270 ISI-VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 ++ +LGG+ +L AILI + E+ S + + + Sbjct: 264 FALPAVLGGIGTLWGAPLGAAILIPLTEITRSY----------LGGSGSGLDLIIYGALI 313 Query: 329 FLVILMRSHSLLRLRTP 345 +V L + LL L T Sbjct: 314 MVVALAKPEGLLSLFTR 330 >gi|326775493|ref|ZP_08234758.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|326655826|gb|EGE40672.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 386 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 16/336 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V L L + ++ G+ + + A GL+++ G+ G LS+ A+GAY Sbjct: 36 AVLIGSLLLLVLPFYLDRFWLQAGLFAMAAAIGAIGLNMLTGATGQLSMGHAFFLAVGAY 95 Query: 80 SY-----------VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 Y + GL WL ++ +++GA G I + + RG YL IATL Sbjct: 96 GYSVLAGESGTENGHALTGLGLPTWLAAILAVLLAGAAGGIFSPIAGRLRGAYLGIATLA 155 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + I Q++L +T G G V F T S + P + + L Sbjct: 156 LIFIGQHVLFNAGSLTGGYNGRNVPPLSVFGFTFDDSELVVAAVPFGSSEKLWYAGLLAL 215 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + L A +L R A IRD++ A + + + F +SS + G+AG Sbjct: 216 LLSALFARGVLRGR---PGRAMNAIRDHRIAAGVMGVPVARYRAGVFVLSSMYAGLAGVL 272 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY--YF 306 A R P+ F ++ ++++++GG+ S++ A + + ++ + + Sbjct: 273 LALVFQRTVPEYFGMILSLEYLAMIVIGGLGSVAGAVVGAAFVSLLPQVFTHYSDFLPLV 332 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + L A+ V+L L RL Sbjct: 333 SAPGTGGLAPGEASRYLYGAAVVAVVLFLPGGLARL 368 >gi|237737372|ref|ZP_04567853.1| branched-chain amino acid transporter permease livM [Fusobacterium mortiferum ATCC 9817] gi|229421234|gb|EEO36281.1| branched-chain amino acid transporter permease livM [Fusobacterium mortiferum ATCC 9817] Length = 325 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 74/340 (21%), Positives = 140/340 (41%), Gaps = 45/340 (13%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + +L ++ LL + + +Y ++ I I I ++ A L+I VG LG +++ Sbjct: 9 YALTLILVIIGYFLLTGLISSGMISRYQTTVMIFICINIILAVSLNITVGCLGQITIGHA 68 Query: 72 IAYAIGAYSYVILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 ++GAY+ + + + V +++G G+++G+P+L+ GDYLAI TL Sbjct: 69 GFMSVGAYTAALFAKTGIVEGLPGYIIALIVGGIVAGIVGIVIGIPALRLNGDYLAIITL 128 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + +L+++ T G G+ R G V+ Sbjct: 129 AFGEIIR-VLVEYFDFTGGAQGLRGIPRFNKFG-------------------------VI 162 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + L ++ L + A IRD++ A + + K AF VS+ F G+AG Sbjct: 163 YIIMVLCVMMMFSLMTSRHGRAILAIRDDEIASGASGINTTYYKTFAFTVSAIFAGVAGG 222 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + + F F+ +I ++ +V+LGGM S + + L + E+ + Y Sbjct: 223 IYAHNLGILGARQFDFNYSINILVMVVLGGMGSFTGSFLSAIALTILPEVLREFSDY--- 279 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L L ++ R LL + Sbjct: 280 ------------RMIVYSLLLILTMIFRPTGLLGRKEFQI 307 >gi|212702449|ref|ZP_03310577.1| hypothetical protein DESPIG_00466 [Desulfovibrio piger ATCC 29098] gi|212674110|gb|EEB34593.1| hypothetical protein DESPIG_00466 [Desulfovibrio piger ATCC 29098] Length = 344 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 58/332 (17%), Positives = 108/332 (32%), Gaps = 7/332 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +A++ L L Y + I I + A L+++ G GL SL Sbjct: 8 LLNIALIVIFGLALTQAEAYMGDYQIYILKLIFINAILALSLNLIYGFTGLFSLGHAGFM 67 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AIGAY + + I + + ++ L Sbjct: 68 AIGAYVGALCTLLPEQKEIMWILDPIIWPFSVLHTPFWVAVI--AGGLVAMIFAFIIAVP 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + G R+ + T + + Y + + Sbjct: 126 VLRLGDDYLGIATLGFAEIIRVVIVNATSITNGSLGIKGIPGEATLLTCYIWTVI----T 181 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ L + N R IRDN+ A + + K+ +F V + F G+ GA + Sbjct: 182 LVVLSRLIFSNFGNVLRCIRDNEIAAGVMGINVFRYKVLSFCVGAFFAGVGGALLGSHLS 241 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I P MF F V+ V+ GG+ SL+ I+ ++E + + + Sbjct: 242 TIDPKMFNFLLTFNVLMFVVAGGLGSLTGSLLGATIVTILLEWLRAIEEPMDFGVFEIP- 300 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + L +IL R ++ R + Sbjct: 301 GIPGMRMVVFSLILLAIILFRREGIMGTREIT 332 >gi|254438351|ref|ZP_05051845.1| ABC transporter, ATP-binding protein [Octadecabacter antarcticus 307] gi|198253797|gb|EDY78111.1| ABC transporter, ATP-binding protein [Octadecabacter antarcticus 307] Length = 603 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 112/335 (33%), Gaps = 26/335 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 +L++ ++ + L + Y+ + +I+ + L ++ G GLL Sbjct: 4 KLHRRSGLVFPILATLIALAI----SGSLDPYLAFVATSWIIFGLLGLSLDVIWGRGGLL 59 Query: 67 SLNCVIAYAIGAYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 SL Y +G Y ++ +G+++ +P +A+ +G R L Sbjct: 60 SLAQTAFYGLGGYFGAVIAINMAPSFGMTLVWALPAAAVFGALIAAALGYIIFYSRMGEL 119 Query: 123 AIATLIMSEIFQNILIKWKP-------ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 L + + G G+ + ++ ++ Sbjct: 120 QSTILSYTFTLLLWSVTQTFKLDVGEATIGGDNGLSNIPGIILGFGAEAGKLKPNGAFAT 179 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 V+ +Y+ WL R+ IR + + L I ++ F Sbjct: 180 VVVVSAAVYF-----------FTHWLMRSNFGKVVDCIRIDIEKTELLGYDIRKIQVLNF 228 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 A S A G+AGA FA + ++P +F E +++ V++GG+ +L+ ++ + Sbjct: 229 AYSGAIAGIAGALFALWANYLNPSIFSVQEALLIPIYVLVGGLGTLAGPFLGAIVIGALS 288 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 G +L+ + L Sbjct: 289 FWLGGGAAGGQTTLILGAILILLVLFLQNGFLGAL 323 >gi|121607887|ref|YP_995694.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121552527|gb|ABM56676.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 357 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 120/306 (39%), Gaps = 20/306 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +++ I +L + A +++ G +G +S + +G Y V+L + GLS W+ Sbjct: 31 DEFLIHSLIMVLYFAYLASAWNLMCGYVGQVSFGHSVFSGVGGYCSVLLLTGIGLSPWIG 90 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + + + + + +G +++ RG Y A+ ++ +EI + L + Sbjct: 91 MLLGGLAAASLALAIGSCTMRLRGPYFALTSIAFAEIIRIWLENTDIVFGIH-------- 142 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + + YY+++GM L +I + R+ + + IR Sbjct: 143 -LKGAEGLSVPLLGTSWAMFQFESKQPYYYIIVGMLVLVMTITWLMERSRLGVCLKAIRG 201 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVI 274 ++ A SL L+A A+S+ + G+F+A I+P+ +I + + I Sbjct: 202 DRDAAESLGIDPTRYTLTALALSAFMTALGGSFYAQFIRFINPERNMGTELSIDMALMSI 261 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG ++ L + E+ F H L + L + +L Sbjct: 262 IGGQGTVFGPLVGALFLAPLAEITRSY----------LGGQFAGLHLVLYGLVLIMAVLY 311 Query: 335 RSHSLL 340 LL Sbjct: 312 LPKGLL 317 >gi|253584208|ref|ZP_04861406.1| branched-chain amino acid transport system permease livM [Fusobacterium varium ATCC 27725] gi|251834780|gb|EES63343.1| branched-chain amino acid transport system permease livM [Fusobacterium varium ATCC 27725] Length = 323 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 71/336 (21%), Positives = 139/336 (41%), Gaps = 45/336 (13%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L + +L +GA +Y ++ I I ++ A L++ VG LG +++ + Sbjct: 13 FILLTILYFILTGMIGAGFISRYQTNILTLICINIILAVSLNVTVGCLGQITIGHAGFMS 72 Query: 76 IGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +GAY+ + L + + +++ G+I+G+P+L+ GDYLAI TL E Sbjct: 73 VGAYAAALFAKSGIVEGIPGYILALIIGGIVAAIIGIIIGIPALRLNGDYLAIITLAFGE 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + +LI++ T G G+ R G V+ + Sbjct: 133 IIR-VLIEYFSFTGGAQGLRGIPRFNKFG-------------------------VIYIIM 166 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 S ++ + + A +IR+++ A + + K AF +S+AF G+AG +A Sbjct: 167 AASVMMMFSVMTSRHGRAILSIREDEIASGASGINTTYYKTFAFTISAAFAGVAGGVYAH 226 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + F ++ +I ++ +V+LGGM S + + L + E+ G + Y Sbjct: 227 YLGILGARQFDYNYSINILVMVVLGGMGSFTGSILSAIALTILPEVLRGFSDY------- 279 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L + ++ R LL + Sbjct: 280 --------RMIVYSLLLIMTMIFRPTGLLGRKEFQI 307 >gi|163793664|ref|ZP_02187639.1| ABC transporter ATP-binding/permease protein [alpha proteobacterium BAL199] gi|159181466|gb|EDP65981.1| ABC transporter ATP-binding/permease protein [alpha proteobacterium BAL199] Length = 573 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 129/335 (38%), Gaps = 22/335 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 R ++ D + A + + + Y + + IY + A G +V G LGL Sbjct: 2 TRFDRRDGVYLAAAALGIGGVVIA-----GDAYALRIASLVGIYAIAAIGYQLVFGRLGL 56 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LSL + +GAY+ +L GL + + + + ++ ++ LP + Y+A+A Sbjct: 57 LSLAQGAFFGLGAYASALLTVSAGLPVPVGLAAAVVVPALAAAVIALPIARLESHYVALA 116 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++++ + T G GIY + T+ L ++ V+ ++ Sbjct: 117 TLGLAQLALLAATNLE-FTGGANGIYGVPPIVTNSITIGPLDVGSVTIAALVVPGGWVTL 175 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA-FFSLNTTIIFAKLSAFAVSSAFIGM 244 + + L+A ++ +A DN +L A+L FAV+ G+ Sbjct: 176 ISVWFGVLAALLVARAVTRGDRSAVLATLDNAPHAAAALGLNGTTARLVLFAVAGGLGGL 235 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG A +SP + F + +++I ++GG S A+LI + E+ + Sbjct: 236 AGGLQAHGLGVVSPAVVGFEVMVTILAIAVIGGRGSPVGAVLGAALLIPLPEVFRFLEGS 295 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 Y + L I++ L Sbjct: 296 Y---------------LIAYGVVLLAAIILMPRGL 315 >gi|114567620|ref|YP_754774.1| branched-chain amino acid ABC transporter permease [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338555|gb|ABI69403.1| branched-chain amino acid ABC transporter, permease protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 298 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 130/316 (41%), Gaps = 41/316 (12%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + I + I ++ A GL+++ G G LS+ +IGAY+ IL ++G S + Sbjct: 13 DPYYLRIMILLGINIILALGLNLITGVTGQLSMGHAGFMSIGAYTSAILSMQFGFSYLMA 72 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + A ++ G ++G+P+L+ GDYLA+ T+ +EI + + ++P Sbjct: 73 LLTGAAVAAFFGFLIGIPTLRLEGDYLAMVTIGFAEIIRVFFLNFEPGGRAV-------- 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 I + + + + + ++ L ++ + A+ IR+ Sbjct: 125 ------------------GLSGIPQHTNFITVWLIALIIIALNTRLLKSRMGRAFYAIRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ A S K+ AF S G+ G ++ I+P F F ++I ++++VIL Sbjct: 167 NEIAAASTGIDTTRLKILAFTAGSFLGGLGGGLYSHYMYYINPQDFGFMKSIELLNMVIL 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ + IL E+ + Y L ++++ R Sbjct: 227 GGMGSIPGTILGSFILTLAPEMLRIVAEY---------------RLLFYGALLVILMIFR 271 Query: 336 SHSLLRLRTPSNFLER 351 + +L + +R Sbjct: 272 PNGILGDVRIYDLKKR 287 >gi|160895529|ref|YP_001561111.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160361113|gb|ABX32726.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 361 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 73/338 (21%), Positives = 133/338 (39%), Gaps = 24/338 (7%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + + AV + L L Y+ + ++ +I +FA L ++VG G Sbjct: 23 PAEMPQRACRWQACAVPLACVALLALAGPWWSDYLSGLVVKTMILAIFALSLQLLVGGTG 82 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L+SL +GAY+ V+ G S+ ++ + + SG +++GL SL+ RG Y + Sbjct: 83 LVSLGHAAFMGLGAYAAVLSAGNEGGSLPAMLGWALLASGGYALLVGLLSLRTRGIYFIM 142 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL ++ I G GIY+ R + Y Sbjct: 143 VTLAF-AQMAYFVVHDTGIGGGSDGIYLMARPALGAIDME--------------IPRVQY 187 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 YV+L L + + LR++ A IR N++ + T KL+AF ++ G+ Sbjct: 188 YVVLAALVLVYAFLAGLRQSRFGAALAGIRVNEQRMRAAGFTTYGYKLAAFVLAGMLAGV 247 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG A ++P++ + + V+ +VILGG+ SL T I + E+ Sbjct: 248 AGFLLAVRDAVVNPELLSWHHSGEVLLMVILGGLGSLRGAVLGTVAFIALKEVLST---- 303 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + +A+ +++ + L+ L Sbjct: 304 -----HAIVGPMADHWQLSLGLAIIVLVALLPKGLMGL 336 >gi|282882311|ref|ZP_06290942.1| high-affinity branched-chain amino acid transport system permease protein BraE [Peptoniphilus lacrimalis 315-B] gi|281297861|gb|EFA90326.1| high-affinity branched-chain amino acid transport system permease protein BraE [Peptoniphilus lacrimalis 315-B] Length = 331 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 70/340 (20%), Positives = 142/340 (41%), Gaps = 45/340 (13%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + LL + ++ +Y ++ + I ++ A L+I VG+LG ++L Sbjct: 9 YILAFLLLIGLYGIILFLNRQGIVNRYSLTVLRMVAINIILATSLNITVGNLGQITLGHA 68 Query: 72 IAYAIGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +IGAYS + L + ++ G+I+GLP+L+ +GDYLAI TL Sbjct: 69 GFMSIGAYSAALFAKSAIVPGMAGYILSLFFGGFVAFIFGIIIGLPALRLKGDYLAIVTL 128 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + +LI++ T G G+ + ++ Sbjct: 129 AFGEIIR-VLIEYFNFTGGAQGLSGIPMMKSFD-------------------------II 162 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + +++ + + A +IR+++ A + + F K AF++S+ F G+AGA Sbjct: 163 YVIMIICVTLMYSVMTSRHGRAVLSIREDEIASEASGINVTFYKTFAFSLSAFFAGLAGA 222 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + I +F ++++ ++ +V+LGGM S + + +L + E+ Y Sbjct: 223 IYAQNIGVIDAKIFDYNKSFDILVMVVLGGMGSFTGSIISATVLTIIPEILRSFASY--- 279 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L ++++ R LL + S Sbjct: 280 ------------RMVIYSLVLIVMMMFRPVGLLGRKEFSL 307 >gi|170740369|ref|YP_001769024.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168194643|gb|ACA16590.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 344 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 128/318 (40%), Gaps = 24/318 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 Y+ ++ I L+Y A +I+ G G +SL + + IGAY +L YGL Sbjct: 41 PYGIRDVYLQNVLILTLMYAALAQSWNILGGYCGQISLGHALYFGIGAYFTSVLFVTYGL 100 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W + + S +++G P + G Y +IAT++++EI ++ W + Sbjct: 101 LPWAGMLAGGVASALVALLLGYPCFRLAGHYFSIATIVIAEIGLLLVHNWDFVGGAMGIQ 160 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + + + F ++ + LG+ + + + W Sbjct: 161 WPFNPDSW-------------WSLQFARDKVPYAHFALGLLAAVWLVTYLIEGSRWGYWW 207 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++D+ +A SL + +K++A AVS+ F + G F+AA I P+ ++ Sbjct: 208 RAVKDDAEAARSLGVEVFRSKMAAAAVSAFFTAVGGGFYAAYVSYIDPESVMSFRFSLLF 267 Query: 271 SI-VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++ +LGG+ +L AILI + E+ S N L + Sbjct: 268 ALPAVLGGIGTLWGPLVGAAILIPLTEISRSY----------LGGSGNGLDLMLYGALVM 317 Query: 330 LVILMRSHSLLRLRTPSN 347 +V L R +L L S Sbjct: 318 VVALARPEGVLSLFARSR 335 >gi|262066269|ref|ZP_06025881.1| ABC transporter, permease protein LivM, hydrophobic amino acid uptake family [Fusobacterium periodonticum ATCC 33693] gi|291380039|gb|EFE87557.1| ABC transporter, permease protein LivM, hydrophobic amino acid uptake family [Fusobacterium periodonticum ATCC 33693] Length = 326 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 138/335 (41%), Gaps = 45/335 (13%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + ++ +LF + + +Y + I ILI V+ A L+I VG LG ++L +I Sbjct: 14 AVLLILYFILFSLINSGFISRYQIGIIILILINVILAASLNITVGCLGQITLGHAGFMSI 73 Query: 77 GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 GAY+ +L + + +++G G I+G+P+L+ GDYLAI TL EI Sbjct: 74 GAYTAALLTKSGILSGYPGYIVALIAGGIVAGIIGFIIGIPALRLTGDYLAIITLAFGEI 133 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +LI++ T G G+ R I + ++ + Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPR-------------------------INNFTLIYFITI 167 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S + + + A IR+++ A + + K AF +S+ F G+AG +A + Sbjct: 168 FSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + F ++ +I ++ +V+LGGM S + + +L + E+ Y Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R LL Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307 >gi|170016905|ref|YP_001727824.1| ABC-type branched-chain amino acid transport system, permease component [Leuconostoc citreum KM20] gi|169803762|gb|ACA82380.1| ABC-type branched-chain amino acid transport system, permease component [Leuconostoc citreum KM20] Length = 326 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 85/340 (25%), Positives = 138/340 (40%), Gaps = 43/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 KY LL + +L+ L +Y + + I I ++ A GL++V+G G SL Sbjct: 7 KYTLTWALLITMLFVLIELLTVFDIIGQYGITTIVLIGINLIAAVGLNLVIGMSGQFSLG 66 Query: 70 CVIAYAIGAYSYVILGSRYG--LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ ++ + L + V +ISG + +G+P+L+ RGDYLAIATL Sbjct: 67 HAGFMAIGAYATALMTTALPSIYGFILSLLVGGLISGLVALAVGIPTLRLRGDYLAIATL 126 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + I+I IT G AGI+ + Sbjct: 127 GVSEIIRIIIINM-KITRGPAGIFGIPAFVNWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + I++ R+ A +RDN A SL K+ AF + +AG Sbjct: 161 FVLSVIVIIIVVNFVRSTSGQAIIAVRDNDIAAESLGINTTKYKVMAFVAGAILAAIAGG 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A+ +SP + F ++I ++ IV+LGG+ S+S IL + + Sbjct: 221 LRASFIQSVSPQDYTFMQSITILIIVVLGGIGSISGTVVTAIILGVLDVVLQNF------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +V++ R LL S Sbjct: 275 ---------GTLRMVIYALVLIIVMIFRPKGLLGTTEFSL 305 >gi|317487018|ref|ZP_07945826.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] gi|316921700|gb|EFV42978.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] Length = 347 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 113/333 (33%), Gaps = 7/333 (2%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 +L LA + L LFL T Y + I + + A L+++ G G+ SL Sbjct: 8 LLLNLAAIGLLALFLVWAETNLDGYKVQILNLIAVNAILALSLNLIYGFTGMFSLGHAGF 67 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 AIGAY + + I + +I A + Sbjct: 68 MAIGAYVSALCVLPAAQKEMMWILEDII--WPFSVIHTPFWFSVVAGGFVAAIFGLFIAI 125 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + + G R+ + T + F + Y LL + Sbjct: 126 PVLRLGGDYLGIATLGFAEIIRVLIVNLTPITNGSLGIKGIPFHASLLVNYGWLLVTLYC 185 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 ++ + N ++ IRD++ A + K+ +F + + F G+ GA Sbjct: 186 MVKLL----GSNFGNIFKAIRDDEIAAKVMGIDTFRTKVLSFCLGAFFAGVGGALLGNLL 241 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I P MF F V+ IV+ GG+ SL+ +A++ ++E + Sbjct: 242 TTIDPKMFTFLLTFNVLMIVVAGGLGSLTGSILGSAVITVLLEWLRAVEDPITLGGFAIP 301 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + L +IL R ++ +R + Sbjct: 302 -GIPGMRMVVFSLVLLCIILYRREGIMGMREIT 333 >gi|94986781|ref|YP_594714.1| branched chain amino acid ABC transporter, permease protein [Lawsonia intracellularis PHE/MN1-00] gi|94731030|emb|CAJ54393.1| branched chain amino acid ABC transporter, permease protein [Lawsonia intracellularis PHE/MN1-00] Length = 328 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 77/321 (23%), Positives = 139/321 (43%), Gaps = 31/321 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L + + + Y + + +YV+ A L++++G G+ + YA+GAY Sbjct: 10 LLLGVCIAILPLFLNNYWIDVASNVGLYVLLALSLNVILGQTGIFHMGHSAFYAVGAYFT 69 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-W 140 I + Y + I L+P++ + +I+ P L RGDYL I ++ + EI + L Sbjct: 70 AICNTYYQIPILWLLPLAGFTTAFFALIIVRPILSLRGDYLLIVSIGIVEIVRIALTNDI 129 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 IT G GI+ R +R+ +F YY++ G+ L+ + W Sbjct: 130 CGITGGANGIFGISRPTIGDIVIRTTTQF--------------YYLIWGIVLLTMLLFSW 175 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + A+ +I++++ A II K AF V + + G+AG FA+ ISP Sbjct: 176 LFSSRYGRAFNSIKEDEVAAEGSGINIIHYKWLAFVVGAFWAGIAGNLFASKMTVISPTS 235 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F E++I+ IVIL G S + T +I + E+ + Sbjct: 236 FTIWESVIIFVIVILSG-GSQLGVILGTCFVIALPEIFRSLAD---------------AR 279 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + +A+ +++++R LL Sbjct: 280 MLIFGLAMMIMMIVRPQGLLP 300 >gi|187921210|ref|YP_001890242.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] gi|187719648|gb|ACD20871.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 351 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 68/338 (20%), Positives = 132/338 (39%), Gaps = 33/338 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L++Y +L L VV L L L G S+ ++L++ + A G ++++G GLLS Sbjct: 25 LHRYRFLLLTLLVVCILPLTLRSG---------SLATEVLVFALAALGCNLLLGHTGLLS 75 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 I + +G+Y ++ ++ GL + + + SA+I A ++G S++ RG Y + TL Sbjct: 76 FGQGIFFGLGSYCAGLVLTKTGLPVSMALLASAVIGAAAAALVGWFSIRQRGTYFVMLTL 135 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++F + +T G G+ R + F + Y + Sbjct: 136 AFGQLFYFLAYTTPDLTGGDNGLLDIPRPA---------LGLFGKALVPLTSPWQYYGFV 186 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + +++ + + IRDN+ ++ + KL AF +S A G+AGA Sbjct: 187 AVLFLVVFWLLMRVSHSVFGRTLLAIRDNEARAAAVGYDVKRFKLMAFVISGAVTGLAGA 246 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + + +++ + ++GG +L A + + + + Sbjct: 247 LHALMTGIAPLSNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRW-- 304 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L+ I L V L L L Sbjct: 305 -------------LLLLGIVLIAVSLYMQRGLWGLGER 329 >gi|190894958|ref|YP_001985251.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700619|gb|ACE94701.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 328 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 123/310 (39%), Gaps = 25/310 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y+ I LI+++ A GL+++VG GLLSL + IGAY+ +L YG Sbjct: 31 PFVASTYVVHALIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAYASGLLAVTYGTP 90 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 ++ + + + +GA + +G+P+L+ R + TL I Q I W +T G G+ Sbjct: 91 FYVNVAAAGLAAGAIALPLGIPALRLRSTSFVMCTLGFVIIGQAIAKNWISLTRGDMGLS 150 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + S V YY+ L + L+ + + R+ Sbjct: 151 SIPKP----------HFALGPLSFTVSGTTAFYYLALTVGILATLAVWMIVRSPAGRNMI 200 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IR+N+ S+ KL F +S+ F G+ G+ +A +SP F+ + ++ Sbjct: 201 AIRENETLAESVGIPTWRYKLIVFMLSAVFAGVGGSLYAHYLTVVSPLTFQMYYSTTMLI 260 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 IV+ GG ++S + + + +G+ E + L ++ Sbjct: 261 IVLGGGAGTISGVVFGSLLFVGLTEALR---------------VTPELRMIAYGLCLLVL 305 Query: 332 ILMRSHSLLR 341 + Sbjct: 306 VFWFRKGFAP 315 >gi|326402989|ref|YP_004283070.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|325049850|dbj|BAJ80188.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 328 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 126/325 (38%), Gaps = 26/325 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + A + L L + + ++LIY M A GL++++G G LS + + Sbjct: 22 ISAAIIWLALLFVPIWLPAVGGFTDLASRVLIYAMAATGLNLLLGYTGGLSFGHAAYFGL 81 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY + S+ L + ++ G G+++G +K +G Y ++ T+ ++F + Sbjct: 82 GAYGTGLFIIHVIPSMPLALIAGTLLGGIGGILVGPMVMKRKGIYFSMITIAFGQMFYFL 141 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++W +T G+ G T S + + + YYV+L + + Sbjct: 142 AVRWNTVTGGEDG-----------LTGFSRVPLHLGGETINLGPARFYYVVLALFAVVML 190 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + R+ + +A+ R+N L + AFA+S+ +AG+ A Sbjct: 191 VVWQILRSPMGHAFVATRENTTRLRFLGVAVDKQVWVAFAISAFITALAGSLNAMLTAFA 250 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SPD ++ + + I +LGGM S I I + + Sbjct: 251 SPDDLQWQLSGSFVVICVLGGMRSFWGPFLGAVIYIVAQDYLSSV--------------- 295 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 T + + L +L LL Sbjct: 296 TQNWMTYIGLIFVLSVLFFPQGLLG 320 >gi|188995188|ref|YP_001929440.1| probable ABC transporter membrane protein [Porphyromonas gingivalis ATCC 33277] gi|188594868|dbj|BAG33843.1| probable ABC transporter membrane protein [Porphyromonas gingivalis ATCC 33277] Length = 300 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 21/294 (7%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y+ + + I IY + A LS+V G G +SL Y +GAY+ ++ +G L IP Sbjct: 3 YLLHLFVLICIYTILAQSLSLVAGYSGQVSLAHAGFYGLGAYTTALMSIHWGTPAMLNIP 62 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 V+ ++SG I+ + K DY I TL + + +I+ W+ +T+G GI Sbjct: 63 VAMLLSGGLAWIVARVAAKTVDDYYIIITLGIQVVIYSIMNNWQSVTHGPLGIPGIPA-- 120 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 F + + + + + L + L + + +++ Sbjct: 121 -----------FAIVSGVELESKFAYCLLGVTLASLVWGALHRLMHSPFGRVLIALSEDE 169 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 SL + AK +F +S +AG +A I P F E+I ++SIVI+GG Sbjct: 170 VYTKSLGKDVAGAKTVSFVISGMLASIAGVLYAHYISYIDPSSFTVDESIFILSIVIIGG 229 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 M +L I A A L+ + E + +AL LV Sbjct: 230 MRNLWHIFYAAAFLVLLPEALRFVGMP--------SSVAANMRQIFYGLALILV 275 >gi|297530143|ref|YP_003671418.1| inner-membrane translocator [Geobacillus sp. C56-T3] gi|297253395|gb|ADI26841.1| inner-membrane translocator [Geobacillus sp. C56-T3] Length = 346 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 129/324 (39%), Gaps = 28/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + L L + Y M I+++ +GL++ G G LSL +AIG Sbjct: 9 LWIAVLAALALAFPLLVTNSYYLHMMTISFIWMIAVYGLNLFAGYTGYLSLAHAGFFAIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL + G+ WL ++ + + G ++GL +L+ + + AI TL + I I+ Sbjct: 69 AYALGILTVKAGVPFWLAFVLACLFTTLLGAVIGLVALRTKEHFFAIYTLCVGYIIYLII 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW +T G G + YY++L Sbjct: 129 DKWDSLTGGVRGFIGIPAPAD-------------IGPLSFQTPVAQYYLVLCFLVAVIFT 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + + IR++++ +L + + KL++F +S F +AGA +A+ + Sbjct: 176 MYRLVYSLTGRTYIAIRNSEELALTLGISTMKNKLASFVLSVFFTSLAGALYASFIRFLG 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD+ S ++ +++GG+ +L+ T ++ + + + Y Sbjct: 236 PDIAYVSVMFDFLTYLLVGGIGTLAGPVVGTLLITFLSQQLQFLQDY------------- 282 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + L L+I+ H + Sbjct: 283 --RMLIFGPVLTLLIIFYPHGIAG 304 >gi|294783606|ref|ZP_06748930.1| branched-chain amino acid transport system permease protein LivM [Fusobacterium sp. 1_1_41FAA] gi|294480484|gb|EFG28261.1| branched-chain amino acid transport system permease protein LivM [Fusobacterium sp. 1_1_41FAA] Length = 326 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 73/335 (21%), Positives = 139/335 (41%), Gaps = 45/335 (13%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + ++ +LF + + +Y + I ILI V+ A L+I VG LG ++L +I Sbjct: 14 AVLLILYFILFSLINSGFISRYQIGIIILILINVILAASLNITVGCLGQITLGHAGFMSI 73 Query: 77 GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 GAY+ +L + + V +++G G I+G+P+L+ GDYLAI TL EI Sbjct: 74 GAYTAALLTKSGFLSGYPGYIVALIVGGIVAGIIGFIIGIPALRLTGDYLAIITLAFGEI 133 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +LI++ T G G+ ++ + ++ + Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIP-------------------------KVNNFTLIYFITI 167 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S + + + A IR+++ A + + K AF +S+ F G+AG +A + Sbjct: 168 FSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + F ++ +I ++ +V+LGGM S + + +L + E+ Y Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R LL Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307 >gi|326402537|ref|YP_004282618.1| branched-chain amino acid ABC transporter permease [Acidiphilium multivorum AIU301] gi|325049398|dbj|BAJ79736.1| branched-chain amino acid ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 308 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 132/323 (40%), Gaps = 30/323 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + + S+ IY + A I++G G+ + + + IGAY Sbjct: 11 IAVWILGLFLPLALNSAWVSVAAIFAIYGIVALSEDIILGRAGMFDMGHAVYFGIGAYVT 70 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKW 140 IL + I+L IP + +++ A G ++ P ++ RGDYL +A++ + IF + Sbjct: 71 AILNVTFDWPIFLTIPFAILLAAAFGALLAAPLIRLRGDYLLVASIGFNAIFVLAMQNNL 130 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G GI G + S MY++ + + ++ Sbjct: 131 FGLTGGSDGITGIGVPSLFGLPIESQS--------------AMYWLDWVVLGIVLVLMRN 176 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + A R ++ ++ A ++ K AFA+ + G+AG FA +SP Sbjct: 177 LDGSEFGRALRYLKQDELAATTIGVNPRKVKTLAFAIGAGLAGLAGTLFAVQLSTVSPSS 236 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 FKF+E++ + +IVI+GG S+ + TA++ + ++ Y Sbjct: 237 FKFTESVTLFAIVIVGGQGSIPGVLLGTALMFVLPQVFRDFAQY---------------R 281 Query: 321 TTLMVIALFLVILMRSHSLLRLR 343 + A+ LV+++R L R Sbjct: 282 YLVFGFAMILVMVLRPQGLWPRR 304 >gi|56698116|ref|YP_168488.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56679853|gb|AAV96519.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 358 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 78/344 (22%), Positives = 142/344 (41%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y + L + F + + + +++ I LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYVVLA------VAFGIIPFIINDYWANALLIPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ + ++ I+ A G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVILAGGITAAVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDTFGIIITGPNAPAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L A I L R + W IRD A + + AK++AFAVSS FI Sbjct: 185 TYLFCLVFLTACALIARNLTRGTMGRTWMAIRDMDIAAEIIGVNPLKAKMTAFAVSSFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F ++ +V+ +VI+GG+ S+ A L+ + + Sbjct: 245 GISGALFFALYLGAVEVGEAFGIQKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVVLKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + ++ + + ++M H L +L Sbjct: 305 VGADMLGWPTDI---VAHLQLVIVGGLIVVFLIMEPHGLAQLWR 345 >gi|323700225|ref|ZP_08112137.1| inner-membrane translocator [Desulfovibrio sp. ND132] gi|323460157|gb|EGB16022.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132] Length = 364 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 124/339 (36%), Gaps = 28/339 (8%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----- 88 YI ++ + I +M + L++V G++G + +GAY +L Sbjct: 25 ILDNYIQAVIMFGGINIMMSTSLNLVNGNMGEFTCGHAAFMCVGAYVASLLSVLCFGNKF 84 Query: 89 ----------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 ++I + ++ +++ LPS K R DYLAI T+ ++ + + + Sbjct: 85 GDPLLPAAASYFVFPVIILMGGAVAALSSILVALPSFKTRDDYLAIITIAVNYMVISAIE 144 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 I + + D ++ + + S + ++ ++ +I Sbjct: 145 NMDWIGGSRGFQGMKDTVWAMVDSTPSW-------LAGDNDFPWVLLFVILFTAFDIWVI 197 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + ++ A ++ K F +S+ G AG FA ++P Sbjct: 198 RRFITSTYGKGVNAVCQDETAAEIMSVNTNKIKTVNFMISAGLAGCAGGLFAHVVGYVNP 257 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG------MNFYYFNSLLKF 312 F ++ + +V LGGM SLS + + ++E+ + + Sbjct: 258 QSFNILKSTEAMVMVYLGGMGSLSGAVISAVVFTFLLEVLRSQALIDFLLAPATFVFPDW 317 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + S + L+ + L L++ R ++ + S+ + Sbjct: 318 EPSAGVIKWVLIPLLLVLIMQFRPEGIMGNKELSDVFPK 356 >gi|89902149|ref|YP_524620.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89346886|gb|ABD71089.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 526 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 95/306 (31%), Gaps = 17/306 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I ++ A GL+I G +G++++ IGAY+ ++ + + + + Sbjct: 237 ISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQALFQKYLPGAFDWYLLA 296 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 S + ++ + + +L W + + +G Sbjct: 297 SVPVAFLASALMGAALER--SVIRFLYGRPLETLLATWGISLMLQQLVRSFFGAQNVGVE 354 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 S + + ++ F+ ++ + RT + R + N+ Sbjct: 355 NPSWMSGGVQVLGNLSLPFNRLVIVGFAVFVLLAVAWLIGRTRLGLFVRGVTQNRPIAAC 414 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + AFA+ S G+AG A S+ + +V+LGG+ L+ Sbjct: 415 MGVNTARIDTYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGVGQLA 472 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L + + G +++ + + I R + + Sbjct: 473 GTVYAAMGLGILNKFLEGWTGAVLAK-------------IAVLVFIIIFIQKRPQGIFAM 519 Query: 343 RTPSNF 348 + S Sbjct: 520 KGRSAE 525 >gi|160901753|ref|YP_001567334.1| inner-membrane translocator [Petrotoga mobilis SJ95] gi|160359397|gb|ABX31011.1| inner-membrane translocator [Petrotoga mobilis SJ95] Length = 357 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 121/339 (35%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L+ K + + + L L K+ Y+ + + I ++FA L+ + G G+ S Sbjct: 5 LSFKTKFFLTILFILAIFLLLLTANNKASDYLILILNLMAINIIFAVSLTFINGITGIFS 64 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L V AIGAY IL + + I LP++ G L A Sbjct: 65 LGHVGFIAIGAYVSSILTLSPAQKEISFLIKPLIYPLNVIQIPFLPAIIIAG--LVAAAF 122 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ + + G+ R+ T + I + + Sbjct: 123 GYLVAAPSLRLIGDYLAIATLGLGEVVRIVANNTWSITN----GALGLKSIPQYSNLWWT 178 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G ++ I L +++ A + IR++ A S+ + ++ F + S F G+ GA Sbjct: 179 WGFALITVVFISSLIKSSYGRALKAIREDPIAAKSMGINVFSHQVVTFVIGSFFAGVGGA 238 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A I P F F + ++ +V++GG+ S+S ++ +E + Sbjct: 239 LWAHLITTIDPKSFMFQKTFEILIMVVIGGLGSISGAIIGASLYTVGLEFLRVLEEPISI 298 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + ++ + L + +L ++ + Sbjct: 299 GPIYIP-GIPGMRMVVLSLILIITMLFWRRGIMGRNEIT 336 >gi|111018006|ref|YP_700978.1| ABC branched chain amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110817536|gb|ABG92820.1| ABC branched chain amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 329 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 122/310 (39%), Gaps = 6/310 (1%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +G + Y + A GL++ G GLL+ + +G Y I+ Y +W+ I V Sbjct: 15 IGPSAIFYALLAIGLNLHFGYAGLLNFGQIGFALLGGYGVGIMTVTYQQPLWVGILVGLA 74 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159 +G +++G+P+L+ R DYLAI T+ SEI + I IT G++ + Sbjct: 75 AAGLLAVVLGIPTLRLRADYLAIVTIAASEILRLIFRSTASDSITGSTNGLFGFADPFTT 134 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + S ++ F +++ V + + + L + + +R+++ A Sbjct: 135 LSPFDSGKQYNFLGVKFYGDDLWSMVVGWTLVLVLCGFVFLLTHSPWGRVLKAVREDEDA 194 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L + K+ A + G+ G F A I+PD + ++ +ILGG Sbjct: 195 ARALGKNVFVYKMQALVLGGMIGGLGGVFNALQTKSINPDFYSTAQTFFAFGALILGGAA 254 Query: 280 SLSKIAKATAILIGVV----ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 ++ + ++ L L + L+ I + ++++ R Sbjct: 255 TVFGPVVGAMLFWFLLAIPDALLRQAISGPEPLLPLTEQQVGAMRFVLLGIMIAVLMVFR 314 Query: 336 SHSLLRLRTP 345 +L + Sbjct: 315 PQGILGNKRE 324 >gi|322411204|gb|EFY02112.1| branched-chain amino acid transport system permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 317 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 78/343 (22%), Positives = 140/343 (40%), Gaps = 42/343 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + NK L+ + L+L L +G Y + + I I ++ A G ++V+G G Sbjct: 3 KENKALLAWILILALVYLILTLLIGTVTLGPYYVQILMGIGIAIIMAMGTNLVLGFSGQF 62 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L A+GAY+ IL +L + V +++G +I+G P+L+ +GDYLAI Sbjct: 63 PLGQAGFMAVGAYATAILTKYMPTYLGFYLSMLVGVLVAGLIAVIVGFPTLRLKGDYLAI 122 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 ATL ++EI + +I +TNG AG + + + Sbjct: 123 ATLGVAEIIRIAIINGGELTNGAAG-------------------------LTGVLQYTSW 157 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 V+ + A ++L R+A +R+++ A S+ K+ FA+++ M Sbjct: 158 PVVYAFVVVIAIVMLNFIRSATGRKVIAVREDEIAAESMGVNTTKIKVITFALAAMTASM 217 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+ + + P F +I + I +LGG+ S++ A +L + Sbjct: 218 AGSLYVGYIGTVVPKDFTIMRSIDYLIIAVLGGLGSMTGTIVAAIVLGLLNMYLQNF--- 274 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL R Sbjct: 275 ------------SDVRMIIYSLALILVMVFRPGGLLGTREFRL 305 >gi|254510519|ref|ZP_05122586.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] gi|221534230|gb|EEE37218.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] Length = 358 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 144/344 (41%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y + L + F + + + +++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRYRYYVVLA------VAFGIIPFIINDYWANALLLPFLIYAIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ + ++ I+ G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPDISMFIHVILAGGITAIVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDVFGIVITGPNAPAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L + A + L R + W IRD A + + AKL+AFAVSS F+ Sbjct: 185 TYLFCLIFVTVCAIVARNLTRGSTGRKWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA F A ++F ++ +V+ +VI+GG+ S+ A L+ + + Sbjct: 245 GVAGALFFAVYLGAVEVGEVFGIQKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVVLKL 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + ++ + + +++ H L +L Sbjct: 305 IGVDLLGWPTDI---VAHLNLVVVGALIIMFLILEPHGLAQLWR 345 >gi|149916234|ref|ZP_01904755.1| inner-membrane translocator [Roseobacter sp. AzwK-3b] gi|149809894|gb|EDM69745.1| inner-membrane translocator [Roseobacter sp. AzwK-3b] Length = 329 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 114/328 (34%), Gaps = 22/328 (6%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +I+ L V+ L + + + I ++ ++ G SL V Sbjct: 1 MRIVRRLVVILLAACALLALPHGLSFSQQEILVFLTINILLVSSYRLLT-LTGEWSLAHV 59 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + +GAY+ + G+ + + I + + +++ P + +G Y I + E Sbjct: 60 VIMGVGAYASALYSKELGVWVPVSILLGGATAALLAVLLSFPLFRMKGFYFLIGSFAAGE 119 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + + +++ G GI + + + F + YY+ + Sbjct: 120 IIRLLWKRFRDPFGGPKGIKGIEPMPDFSIGIYDFDFFE---------PVSYYYLSAFVV 170 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + ++ + R+ + + + K + + + AFA++S F G+ G A Sbjct: 171 AVCLWLLWRIERSPVGLTFHAVHWQDKLAEASGVNLRAYRTLAFAIASGFAGIGGGLMAH 230 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 I+P+ F + V++ I+GG + +L + E+ Sbjct: 231 YVGTINPNSFDVDLMVYVLTWAIVGGTGTFYGPILGCVVLTVLNEIVLR----------- 279 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSL 339 + F + + + L IL L Sbjct: 280 -ELGFEQMRPLIYGLIMILSILFLPKGL 306 >gi|154486423|ref|ZP_02027830.1| hypothetical protein BIFADO_00237 [Bifidobacterium adolescentis L2-32] gi|154084286|gb|EDN83331.1| hypothetical protein BIFADO_00237 [Bifidobacterium adolescentis L2-32] Length = 454 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 28/305 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I L+ + + G+++V G+ GL S + +G + + + + +I Sbjct: 174 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAYVGTQMLHMPLIASAIFAIVI 233 Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 G I R + +I++ L G + Sbjct: 234 GALTGFIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 286 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 F + ++ L + + L+L +T + A R + DN Sbjct: 287 -----KSVPDSFQLGPITTDMPTLVSALIAICVIVGVTLFLYKTRLGRATRAVSDNAALA 341 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + + +S A ++G + IS + + +++ + V LGG+ + Sbjct: 342 AASGINVDQVVRVVWILSCAMAALSGVLLGVYLNGISWNT-GATLILLMFAAVTLGGLGT 400 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + ++ V ++ + N + L +V+L+R + Sbjct: 401 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 447 Query: 341 RLRTP 345 + Sbjct: 448 GKQQR 452 >gi|148259375|ref|YP_001233502.1| inner-membrane translocator [Acidiphilium cryptum JF-5] gi|146401056|gb|ABQ29583.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidiphilium cryptum JF-5] Length = 308 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 132/323 (40%), Gaps = 30/323 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + + S+ IY + A I++G G+ + + + IGAY Sbjct: 11 IAVWILGLFLPVVLNSAWVSVAAIFAIYGIVALSEDIILGRAGMFDMGHAVYFGIGAYVT 70 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKW 140 IL + I+L IP + +++ A G ++ P ++ RGDYL +A++ + IF + Sbjct: 71 AILNVTFDWPIFLTIPFAILLAAAFGALLAAPLIRLRGDYLLVASIGFNAIFVLAMQNNL 130 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G GI G + S MY++ + + ++ Sbjct: 131 FGLTGGSDGITGIGVPSLFGLPIESQS--------------AMYWLDWVVLGIVLVLMRN 176 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + A R ++ ++ A ++ K AFA+ + G+AG FA +SP Sbjct: 177 LDGSEFGRALRYLKQDELAATTIGVNPRKVKTLAFAIGAGLAGLAGTLFAVQLSTVSPSS 236 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 FKF+E++ + +IVI+GG S+ + TA++ + ++ Y Sbjct: 237 FKFTESVTLFAIVIVGGQGSIPGVLLGTALMFVLPQVFRDFAQY---------------R 281 Query: 321 TTLMVIALFLVILMRSHSLLRLR 343 + A+ LV+++R L R Sbjct: 282 YLVFGFAMILVMVLRPQGLWPRR 304 >gi|260427755|ref|ZP_05781734.1| ABC branched-chain amino acid family transporter, fused ATPase and inner membrane subunit [Citreicella sp. SE45] gi|260422247|gb|EEX15498.1| ABC branched-chain amino acid family transporter, fused ATPase and inner membrane subunit [Citreicella sp. SE45] Length = 609 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 119/322 (36%), Gaps = 45/322 (13%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--------- 91 + I ++ G+ I G+ G+LS + A+GAY +L + Sbjct: 36 RVLSVFFISLIAVVGIGIYSGNSGVLSFGHLSFMAVGAYVSALLTLPAAMKAATLPKLPA 95 Query: 92 --------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 ++ I V+ +++ A +++GL + G IATL + I ++I W+ + Sbjct: 96 WLAATELGLFPAILVAIVVTCAFALVVGLAVGRLDGSAATIATLGLLIITHGVIIGWRDV 155 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 T G + R +V G C + + R Sbjct: 156 TRGSGTFFGVPRET-------------------------SLWVAAGWCVAALVVARLYRD 190 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 + R R+N A ++ + +L ++ +S+A + ++GA A SP F F Sbjct: 191 SVSGLRLRASRENAIAAGAVGVDMKRERLISWILSAAVMAVSGALIAHFLGAFSPKKFYF 250 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + +++++I+GGMT+++ + V E+ + F + Sbjct: 251 VDTFQLLAMLIVGGMTTVTGAVTGAVTITVVTEVLRRFESGFDIGAFTVPQVFGTTQ--I 308 Query: 324 MVIALFLVILMR-SHSLLRLRT 344 + + L + R + L L+ Sbjct: 309 GIALIILFAMFRKAEGLAGLKE 330 >gi|296135328|ref|YP_003642570.1| inner-membrane translocator [Thiomonas intermedia K12] gi|295795450|gb|ADG30240.1| inner-membrane translocator [Thiomonas intermedia K12] Length = 354 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 77/339 (22%), Positives = 140/339 (41%), Gaps = 23/339 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ L L+ F+ + S + ++ + LI + A GL+++VG Sbjct: 18 QIFPIRQDR------LFIGAVLLIAFVAVPLLGSDYLLRALLVPFLILALAAIGLNVLVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY+ ++ G+ + + + ++ +I+ GM+ GLPSL+ RG Sbjct: 72 YCGQISLGTGAFMAVGAYAAFNLMVRLPGMPLLIALVLAGLIAALAGMVFGLPSLRIRGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL + +TNG + V + Sbjct: 132 YLAVATLAAQFFSDWVFAHVPWLTNGSSSGSVTAPQLQ-------------VFGFVIDSP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 I Y L + + A ++ L R W RD A + + + AKLSAFAVSS Sbjct: 179 IRKYLFCLAILSVLALLVKNLVRGRKGREWMATRDMDVAASVIGISPVRAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +G+AGA +A P F ++ ++ ++I+GG+ S+ A ++ + Sbjct: 239 IVGIAGALWAFVHLGSWEPAAFNIDLSLKLLFMIIIGGLGSVMGSLFGAAFIVLLPIFLN 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + L + + + L ++ H Sbjct: 299 RLLSFL--GLQASTSFISHLELMTFGVLIVLFLIAEPHG 335 >gi|25011670|ref|NP_736065.1| hypothetical protein gbs1630 [Streptococcus agalactiae NEM316] gi|77408315|ref|ZP_00785057.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77414835|ref|ZP_00790951.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|24413210|emb|CAD47289.1| Unknown [Streptococcus agalactiae NEM316] gi|77159112|gb|EAO70307.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|77173078|gb|EAO76205.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|319745544|gb|EFV97846.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 317 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 78/335 (23%), Positives = 140/335 (41%), Gaps = 42/335 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + V+ LL+ + + Y + I I V+ A GL+++VG G SL Sbjct: 11 WLAIVVLGYLLISVLISMGIFNLYHIQIIETIGINVILAVGLNLIVGCSGQFSLGHAGFM 70 Query: 75 AIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 AIGAY+ I+G + + I V +++G + +G+P+L+ +GDYLAIATL ++EI Sbjct: 71 AIGAYAVAIIGVKMPTYVGFLIAILVGTLVAGGIALGVGIPTLRLKGDYLAIATLGVAEI 130 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +L+ ITNG AGI + ++ G+ Sbjct: 131 IRILLVNGGDITNGAAGIMGIPPFT-------------------------TWSLVYGVAV 165 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 +S + + R+ + IR+++ A S+ K+ F + +AG+ A Sbjct: 166 VSLILAMNFLRSPLGRNTIAIREDEIAAESMGVDTTKVKVIVFVFGAILASIAGSLQAGY 225 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + P F F ++ V+ IV+LGG+ S++ A +L + L Sbjct: 226 VGTVMPKDFSFMMSVNVLIIVVLGGLGSMTGTVLAAILLGLLNMLLQDY----------- 274 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL L+++ R LL + + Sbjct: 275 ----ASVRMIIYALALILIMIFRPSGLLGTKELTL 305 >gi|325970448|ref|YP_004246639.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy] gi|324025686|gb|ADY12445.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp. Buddy] Length = 379 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 119/357 (33%), Gaps = 17/357 (4%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +++ + + + + L+ + S+ + +I + A ++++ G GL Sbjct: 2 IKIKRNNIYTIVTLALLLAFLYWLSANRLQHGMLVSVLQKGVILALVAVSMNLLNGFTGL 61 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGL----------SIWLLIPVSAMISGACGMIMGLPSL 115 SL +IGAY+ IL + + + S + + P + Sbjct: 62 FSLGQAGFMSIGAYTTAILLIPVQNLDGVYYMNGVHPAIRAFKTMVASSPELVRIVFPFV 121 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 L A + +K + G+ R F + + Sbjct: 122 ALLLGGLLAAFAAAFVGIAVLRLKSDYLAIATLGLSEIVRAIFSSPQFDQVTNGSYGLNK 181 Query: 176 FVIYEIFMYYVL------LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + ++ + + I+ L +++ A++ IR+++ A ++ + Sbjct: 182 IPNFPPMLWGAIPSLITPFIVVAFCIVFIMLLIKSSYGRAFKAIREDEIAAEAMGINLFK 241 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 K +F +SS F +AG A I F + ++ IV++GG+ S++ + Sbjct: 242 HKEMSFVISSFFSAVAGGLLAMYMRSIEAKTFSITLTYDILLIVVIGGIGSVTGSVISAF 301 Query: 290 ILIGVVE-LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++ E + + + I L +V+L+ L+ Sbjct: 302 LVTAAKEWWLRFFDQPLTIGTFEVPLFRTGFRMVIFSILLMIVVLIYRKGLMGTNEF 358 >gi|301059360|ref|ZP_07200287.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] gi|300446589|gb|EFK10427.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] Length = 349 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 71/344 (20%), Positives = 138/344 (40%), Gaps = 24/344 (6%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ L+L L + Y M + I ++ A GL+++VG G +SL +A Sbjct: 18 VVVFWFITLMLCLAFFPFFVKNYYVYMANYMAINIIVAVGLNLLVGYTGQISLGHAGFFA 77 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY V+ ++ L L +P +++ G ++G+P+L+ G YL+IATL Sbjct: 78 IGAYGTVVFMAKAHLPFLLALPAGGLVAALFGFLLGIPALRLEGPYLSIATLGFGLTITQ 137 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ + + G+ G++ YY+L+ + L Sbjct: 138 VIGR-VEVFGGRQGLHTPPLTIGPWHLESDRD---------------FYYLLVFITLLLV 181 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + + +T + A+ IRD A ++ + + K AFAVS+ + G+AG +A Sbjct: 182 LVARNIIKTKVGRAFIAIRDADIAAETMGVNLTYYKTLAFAVSAFYAGIAGGLYAFVLRF 241 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I P+MF +II + +V++GG+ S+ +L + + + S Sbjct: 242 IEPEMFGLMMSIIFLGMVVVGGLGSIFGGIAGACLLSWLDLELRNILSIPYLGHWLEALS 301 Query: 316 --------FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L++L + + R Sbjct: 302 KDYFSITGVSNIQFIIYGFIMVLIMLFEPLGIYGFWIRTKIYWR 345 >gi|257469881|ref|ZP_05633973.1| branched chain amino acid ABC transporter permease [Fusobacterium ulcerans ATCC 49185] gi|317064110|ref|ZP_07928595.1| branched-chain amino acid transport system permease livM [Fusobacterium ulcerans ATCC 49185] gi|313689786|gb|EFS26621.1| branched-chain amino acid transport system permease livM [Fusobacterium ulcerans ATCC 49185] Length = 323 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 72/336 (21%), Positives = 140/336 (41%), Gaps = 45/336 (13%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L V +L +GA +Y ++ I I ++ A L++ VG LG +++ + Sbjct: 13 FILLAVLYFILTGMIGAGFISRYQTNILTLICINIILAVSLNVTVGCLGQITIGHAGFMS 72 Query: 76 IGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +GAY+ + L + + +++G G+I+G+P+L+ GDYLAI TL E Sbjct: 73 VGAYAAALFAKSGIVEGIPGYILALIIGGIVAGIIGIIIGIPALRLNGDYLAIITLAFGE 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + +LI++ T G G+ R G V+ + Sbjct: 133 IIR-VLIEYFSFTGGAQGLRGIPRFNKFG-------------------------VIYIIM 166 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 +S ++ + + A +IR+++ A + + K AF +S+ F G+AG +A Sbjct: 167 VVSVMMMFSVMTSRHGRAVLSIREDEIASGASGINTTYYKTFAFTISAVFAGVAGGVYAH 226 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + F ++ +I ++ +V+LGGM S + + L + E+ G + Y Sbjct: 227 YLGILGARQFDYNYSINILVMVVLGGMGSFTGSILSAIALTILPEVLRGFSDY------- 279 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L + ++ R LL + Sbjct: 280 --------RMIVYSLLLIMTMIFRPTGLLGRKEFQI 307 >gi|306819906|ref|ZP_07453559.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552063|gb|EFM40001.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 326 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 45/342 (13%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K I L V +++ + + + YI + I + I ++ A L+I G LG ++L Sbjct: 7 KNFIINILGVSVLFIVINILIQSGMINSYISGILILVCINIVLAISLNITAGCLGQMALG 66 Query: 70 CVIAYAIGAYSYVILGS----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 +IGAY+ + L + + +++ G+++G+P+L+ RGDYLAI Sbjct: 67 HAGFMSIGAYTAALFTKSNLIPGVGGYVLALILGGLVAMIIGVVIGIPALRLRGDYLAIL 126 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL EI + +LI++ T G G+ + Sbjct: 127 TLAFCEIIR-VLIEFFKFTGGAKGLTGIKLNKN-------------------------FA 160 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++ + L ++ ++ A +IR+++ A S + F K AFA S+ F G+A Sbjct: 161 IIYIIMLLCVFMMYTFMKSRHGRAILSIREDEIASESSGINLTFYKTLAFAYSAFFAGVA 220 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G +A + F F+++I ++ IV+LGG+ S + A +L + E+ G N Y Sbjct: 221 GGMYAHYIGILGAKNFDFNKSIDILVIVVLGGLGSFTGSAIGAIVLTILPEMLRGFNDY- 279 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L L+++ R LL + S Sbjct: 280 --------------RMFIYAVMLILMMMFRPSGLLGTKEFSL 307 >gi|311742278|ref|ZP_07716087.1| ABC superfamily ATP binding cassette transporter, permease protein [Aeromicrobium marinum DSM 15272] gi|311313906|gb|EFQ83814.1| ABC superfamily ATP binding cassette transporter, permease protein [Aeromicrobium marinum DSM 15272] Length = 331 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 62/329 (18%), Positives = 126/329 (38%), Gaps = 7/329 (2%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 G+ + ++G +++ + A GL+I G GLL+ A+GAY + + Sbjct: 3 FGSILNAALSSALGPDAIVFALAAIGLNIHFGYTGLLNFGQAGFMAVGAYGLAVSVVTFD 62 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + W + ++ + +++G+P+L+ R DYLAIAT+ +EI + + + Sbjct: 63 IPFWWAMCIAMLAPVLLALVLGVPTLRLRADYLAIATIATAEILRLVFGSVEMSDTLGGS 122 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + SF +++ V + LS ++ L R+ Sbjct: 123 NGLTGYASTFQDLNPYTTGLDLGIVSFRRGDLWSLTVGWILVALSCLLVWLLMRSPWGRL 182 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R+IR+++ A SL + K+ A + F GMAG F A + + P F + Sbjct: 183 LRSIREDEDAVRSLGKNVFAYKMQALVLGGVFGGMAGIFLALKQASVIPTGFSTNVTFFA 242 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMN-------FYYFNSLLKFDCSFNMRHTT 322 + +++GG + + I ++ L + ++ Sbjct: 243 YTALLIGGAARVLGPVIGSIIFWFLMAGIGAFFSQATSGLDPLIPDFLMTNTQASLVRLV 302 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351 L+ + L L+++ R + R R Sbjct: 303 LVGLGLMLLMIYRPQGIFGDRKELAIDAR 331 >gi|163736139|ref|ZP_02143558.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107] gi|163741331|ref|ZP_02148723.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161385684|gb|EDQ10061.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161390009|gb|EDQ14359.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107] Length = 400 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 63/369 (17%), Positives = 127/369 (34%), Gaps = 36/369 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKS-------QKYIDSMGIQILIYVMFAWGLSIVV 60 LNK DK L L+ + L L + + + +I+ +FA G +I+ Sbjct: 4 LNKKDKTLLLVVAILTLFAPFILNPFPTGSALAQFNAGYPDLMQRFVIFGIFAIGFNILF 63 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G LS +G+YS V + +++ I +S +++G +++G SL+ G Sbjct: 64 GLTGYLSFGHAAFLGVGSYSAVWMFKLLSMNVVPAIVLSVIVAGLFALVIGYVSLRRSGI 123 Query: 121 YLAIATLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVR 164 Y +I TL +++ N+ P G + + Sbjct: 124 YFSILTLAFAQMSFNLAYSVLTPITNGETGLQLTLDDPRVLGVSATADGSIPVTSLFGLE 183 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 F + YY+ + + + + + R+ + ++ NQ+ Sbjct: 184 MRSTFEMVVGPWAFQFNAGYYLCALILLAAFYLSIRIFRSPFGLMLKAVKSNQQRMNYTG 243 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 L+AF +S + G+AG A+ + +++ + V+ + ILGG +L Sbjct: 244 LNTRPYTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGP 303 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLV 331 + + +N +S F + I LV Sbjct: 304 VLGAGFIKYFENIFSKINDNVLHSWFSFMPDGIEDAMVFIVHPFIGKGWHLTLGILFMLV 363 Query: 332 ILMRSHSLL 340 ++ L+ Sbjct: 364 VIFLPGGLV 372 >gi|92114433|ref|YP_574361.1| inner-membrane translocator [Chromohalobacter salexigens DSM 3043] gi|91797523|gb|ABE59662.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Chromohalobacter salexigens DSM 3043] Length = 551 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 97/304 (31%), Gaps = 21/304 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+I G +G++++ +GAY+ ++ L + ++ Sbjct: 268 LSAGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWMIQQLLPGQPGLALLLAIPG 327 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 G+ + +L L + +L + + + Sbjct: 328 GFLVAAAFGILIERSVIRFLKGRPL------ETLLATFGISLILQQLVRTVFSPLNRRVA 381 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ + + + VLL + A++ +R T + R + N+ S Sbjct: 382 SPDWLQGAWQINEALSLTLNRLGVLLFCLVVFAALWALMRYTRLGLEVRAVTQNRAMARS 441 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + + G+AG A S+ S + +V+ GG+ +L Sbjct: 442 MGVRAARVDMLTFGLGAGVAGLAGV--ALSQITNVGPNLGQSYIVDSFLVVVFGGVGNLW 499 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L + ++ +++I + L I R L Sbjct: 500 GTLVAGMSLGVINQVLQPWVGAVLAK-------------VIVLIGVILFIQKRPQGLFAP 546 Query: 343 RTPS 346 + + Sbjct: 547 KGRT 550 >gi|311108381|ref|YP_003981234.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310763070|gb|ADP18519.1| inner-membrane translocator 55 [Achromobacter xylosoxidans A8] Length = 338 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 64/322 (19%), Positives = 122/322 (37%), Gaps = 29/322 (9%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 Y + + I +M L++++G G +S+ + +GAY L ++YG Sbjct: 29 FPLVAPNSYAVGLAVTFSINLMLIASLNLLMGYCGQISMCQAGFFGLGAYVSGALSAKYG 88 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + IP + ++ +++ LP L+ RG YLA+ATL + I + ++ T G G Sbjct: 89 VPALASIPAALAVASTAALLIALPVLRLRGHYLAMATLGFNAILSVLFVELVDFTGGPNG 148 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + + G + RF +Y+ L L L R+ I A Sbjct: 149 LSGVEPITVAGYAFDTDRRF--------------FYLAWAAGLLLMWGFLNLTRSRIGRA 194 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 ++ ++ SL K++ F + +A +AG F+ SP+ F FS ++++ Sbjct: 195 MISVAGSEVGAASLGINTYALKVAIFVLCAAVAALAGTFYVHFNQFASPETFSFSASVLL 254 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +V +GG + V EL + L + + Sbjct: 255 LVMVAVGGWGKYWGPLFGALVYTAVPELLRAF---------------HDVELLLFGLGMI 299 Query: 330 LVILMRSHSLLRLRTPSNFLER 351 LV++ L + R Sbjct: 300 LVLMFFPGGLAGMAQRLCRRPR 321 >gi|157364790|ref|YP_001471557.1| inner-membrane translocator [Thermotoga lettingae TMO] gi|157315394|gb|ABV34493.1| inner-membrane translocator [Thermotoga lettingae TMO] Length = 349 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 63/341 (18%), Positives = 118/341 (34%), Gaps = 7/341 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + +A V+ LF+ YI + IYV+ L+++ G G S Sbjct: 1 MYRKSSFWLSVATVFAFFLFIAYAQGNFDAYILRIMNVAAIYVILGVSLNLINGFTGQFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY+ +L L + + I L A Sbjct: 61 LGHAGFMAIGAYTSALLYMSPELK--AMNFFIKPLIWPLNQIQIPFFPALLIGGLLAAGA 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + +K + G R+ F + + + Sbjct: 119 GFLVGAPCMRVKGDYLAIVTYGFSEIIRVLFNNLQSVTN----GPLGLKGLPTYTNLWWS 174 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G+ + + L ++ A + IRD+++A ++ + F K+ AF V + F G+AG Sbjct: 175 WGLAIFTIFFVKRLIDSSYGRALKAIRDDEEAAEAMGVNLFFHKVLAFVVGAFFAGIAGG 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + I P+ F ++ IV+LGG+ S++ + ++ ++E + Sbjct: 235 LLGSLVMTIDPNAFNIMLTFQIVLIVLLGGLGSITGTVISGVLIAFLMEWLRIVETPMTL 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + MR +I + V+ R H +L R S Sbjct: 295 FGITIPGIAGMRMLIFSIILMIAVLFFR-HGILGDREFSWE 334 >gi|114770347|ref|ZP_01447885.1| branched-chain amino acid ABC transporter, permease protein [alpha proteobacterium HTCC2255] gi|114549184|gb|EAU52067.1| branched-chain amino acid ABC transporter, permease protein [alpha proteobacterium HTCC2255] Length = 400 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 132/371 (35%), Gaps = 31/371 (8%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLS 57 M S + + ++A++ P +L F + ++ + + IY + A G + Sbjct: 1 MKSISNADTRTLYFVAIIAILAPFILNPFPTDSGLAQFNAGYPDLMQRFAIYGILAIGFN 60 Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I+ G G LS +G+YS V + ++I I +S +++G +++G SL+ Sbjct: 61 ILFGLTGYLSFGHAAFLGVGSYSAVWMFKLLSMNIIPAIILSVIVAGLFSLLIGFISLRR 120 Query: 118 RGDYLAIATLIMSEIFQNILIK-WKPITNGKAG--------------IYVADRLYFLGTT 162 G Y +I TL +++ + P+TNG+ G + Sbjct: 121 SGIYFSILTLAFAQMSFALAYSVLTPLTNGETGLQITLNDPRIFAAENVSGNLPVTSLFG 180 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + ++ YY+ ++ + + + R+ R ++ NQ Sbjct: 181 MEMRDTWTLNLGAWDFQFNIGYYICAIFLLIAFYLSIRIFRSPFGMMLRAVKTNQTRLNY 240 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L+AF +S + G+AG A+ + +++ + ++ + ILGG +L Sbjct: 241 TGINTRPYTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEIVLMTILGGTGTLL 300 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALF 329 + + +N + + + I Sbjct: 301 GPVMGAGFIKYFENIFSKINDTVLHGWFAWMPDGLENVIVWILHLFTGKGWHLTLGIMFM 360 Query: 330 LVILMRSHSLL 340 L+++ L+ Sbjct: 361 LIVIFLPGGLM 371 >gi|27383042|ref|NP_774571.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27356216|dbj|BAC53196.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 383 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 78/340 (22%), Positives = 133/340 (39%), Gaps = 35/340 (10%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 LL L + Y+ S + + IY L I+ G G SL AIGAY+ Sbjct: 27 ILLALLLVAPYVLSSYLMSQLVFVCIYATVGVALLILTGFTGQASLGHAAFLAIGAYTAA 86 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +Y + + + +++G G ++G P+L+ +G YL IAT+ + I + IL +W+ Sbjct: 87 Y-LQKYNVPFPVYFLAAGLLTGIIGAMVGFPALRLQGIYLVIATISFALIVEEILARWES 145 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG G+ + + Y++ L + L+ L L Sbjct: 146 VTNGNEGMR--------------VKTLSLLGVAVPRDSPTFYFLCLAVLVLTIVGTLNLL 191 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ A+ IRD++ A S+ + K+ +FA+S+A G AG FA ISP+MF Sbjct: 192 RSPTGRAFVAIRDSETAARSMGVNVALYKVKSFAISAAITGFAGVLFAHKLSFISPEMFT 251 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM--------------------N 302 +I I ++++GG SL ++ + + Sbjct: 252 LQLSIEFIIVILIGGSFSLHGAVLGAIFIVMIDPFLTYLKDDMPGIIAGIAAAFGAGTQG 311 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 S + S N + I + L +L L Sbjct: 312 AANVQSKVAAFASLNGLKGAIYGIIIVLFVLFEPLGLYGR 351 >gi|324997164|ref|ZP_08118276.1| ABC transporter permease protein [Pseudonocardia sp. P1] Length = 331 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 119/322 (36%), Gaps = 6/322 (1%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 +G + + +G + + + A GL+I G GLL+ + +GAY I + +G Sbjct: 4 VGQLLTVGFSQLIGPSAIFFALLALGLNIHFGYTGLLNFGQIGFALVGAYGMGISVANFG 63 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN-GKA 148 +WL + + A +I+G+P+L+ R DYLAI T+ +EI + + G Sbjct: 64 APLWLGVIIGMACGVALALILGIPTLRLRADYLAIVTIAAAEILRLVTRSTSQTDFTGGT 123 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 F + + +++ V + L + L R+ Sbjct: 124 QGLTGFADAFAAANPFTQPSYDILGLEVRGPDLWAILVGWTIVGLCVLLTWLLVRSPWGR 183 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 + IR+++ A +L + K+ A ++ F + G FFA + ++PD + + Sbjct: 184 VLKAIREDEDAARALGKNVFAYKMQALSLGGVFGALGGIFFALATQSLTPDFYSPPQTFF 243 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS-----LLKFDCSFNMRHTTL 323 + +ILGG + + ++ + L Sbjct: 244 AYAALILGGAGRVFGPVIGAMLFWFLLSIADAFLRQATAGENPLLPFISSQDVGAIRFVL 303 Query: 324 MVIALFLVILMRSHSLLRLRTP 345 + L L+++ R + R Sbjct: 304 VGAFLGLMMVYRPQGIFGRRRE 325 >gi|262038956|ref|ZP_06012294.1| high-affinity branched-chain amino acid transport system permease protein LivM [Leptotrichia goodfellowii F0264] gi|261747010|gb|EEY34511.1| high-affinity branched-chain amino acid transport system permease protein LivM [Leptotrichia goodfellowii F0264] Length = 347 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 72/345 (20%), Positives = 141/345 (40%), Gaps = 48/345 (13%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + L +V +L L + Y + I ILI ++F++ L+I VG +G LSL Sbjct: 24 RNYSLSFLFIIVLYFILRLSFDPSDPFNYTGGIYINILIAILFSFSLNIAVGIMGQLSLG 83 Query: 70 CVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 A+GAY+ +L L + + +I+G G +G +L+ RGDYL Sbjct: 84 HAGFIAVGAYTGAVLSKALLPYNLPPILQLTITGVAGGIIAGLFGFFVGGSTLRLRGDYL 143 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + ++ + G G+ + Sbjct: 144 AIITLAFGEIIKYVIQNMDFL-GGATGLKNIPNIVTFDN--------------------- 181 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 + + +S I+ + + ++IR+N+ A ++ I KL FA+S+ F Sbjct: 182 ----VYLISIISMLIMGMIMISRKGREIQSIRENEIAAENIGIHINKVKLYGFALSAFFA 237 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+ G+ +A + ++PD F F +I ++ +V+ GG+ S++ + +L + E + Sbjct: 238 GVGGSLYAHNVGVLTPDKFGFMFSIEILVMVVFGGLGSITGSILSAVLLTLLNEQLRQAS 297 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 Y + + L ++++ R + + + Sbjct: 298 EY---------------RYLVYAVILIILMIYRPDGVFGKKEITI 327 >gi|223984823|ref|ZP_03634932.1| hypothetical protein HOLDEFILI_02230 [Holdemania filiformis DSM 12042] gi|223963197|gb|EEF67600.1| hypothetical protein HOLDEFILI_02230 [Holdemania filiformis DSM 12042] Length = 320 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 76/342 (22%), Positives = 144/342 (42%), Gaps = 45/342 (13%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 LNK + +L L+ L + ++ + I I ++ A L++++G G S Sbjct: 5 LNKKNACWLVLIAGSYGLISLLISVGVINNVYLTVLMTIGINIILAISLNLIIGVTGQFS 64 Query: 68 LNCVIAYAIGAYSYVILGSRYGLS---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L IGAY + ++ S I L + + +ISGA +I+ +P+L+ RGDYLAI Sbjct: 65 LGHAGFMIIGAYCAGVAVKQFSASLGGILLGMLIGIVISGAVALIVAIPTLRLRGDYLAI 124 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 ATL EI + I++ K ++ ++ + Sbjct: 125 ATLGFGEIIRIIILNMKITNGAA---------------------------GLILPKLIDW 157 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 V+ + IIL R+A A ++R+++ A ++ K+ AF + + + Sbjct: 158 QVIFAAVVICTIIILNFCRSAQGRACISVREDEIAAEAMGINTTKYKIMAFVLGAMIASV 217 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA +A + I P+MF F+++I ++ +V+ GGM S + A ++ + + Sbjct: 218 AGALYAGAFYVIKPEMFTFNKSIDILVLVVFGGMGSFTGSFIAAGVIGVLNTVLQ----- 272 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 F+ L + L +++ R LL + + Sbjct: 273 ----------QFSDIRMILYGLMLVGIMIFRPSGLLGTKEFT 304 >gi|224150808|ref|XP_002337013.1| predicted protein [Populus trichocarpa] gi|222837832|gb|EEE76197.1| predicted protein [Populus trichocarpa] Length = 579 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 111/264 (42%), Gaps = 14/264 (5%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G GLLS AY +G + L + Sbjct: 34 FVMKLMCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGYAIKGWGFTPELAMLAGTA 93 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 G+I G +++ +G Y ++ TL ++++ + ++ T G+ G+ R Sbjct: 94 GGALLGLIFGWLAIRRQGIYFSMITLALAQMLFFVCLQAP-FTGGEDGLQGVPR------ 146 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYYV L + L+ +I+ + + I++N+ Sbjct: 147 -------GKLFGLIDLTSDLTMYYVTLVIVVLAFLLIVRTIHSPFGQVLKAIKENEPRAT 199 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+A G+AG+ + ++ + VI + ++GG+ +L Sbjct: 200 SLGYDVARFKLLAFVISAALTGLAGSLKTVVLGFATLSDVHWTTSGHVILMTLMGGLGTL 259 Query: 282 SKIAKATAILIGVVELCCGMNFYY 305 S +A+++ + + Sbjct: 260 SGPILGSAVVVMLENKIGEFGSFL 283 >gi|73540690|ref|YP_295210.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72118103|gb|AAZ60366.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 553 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 89/298 (29%), Gaps = 31/298 (10%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIM 110 I G +G++++ IGAY+ ++ + + ++ ++ + Sbjct: 279 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFRTYAPGAFDWYLPAALPASFLAAGIVGFV 338 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 + + TL+ + +L++ G + VA+ + G Sbjct: 339 LERLVLRHLYGRPLETLLATFGVSLLLMQAVRTLFGAQNVEVANPAWMSGGVEWMP---- 394 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 ++ ++L + A L RT + R N+ + Sbjct: 395 -----GLVIPYNRIVIILFALAVVAVAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKV 449 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 AFA + G+ G A S+ + I +V+LGG+ L+ Sbjct: 450 DSYAFAFGAGIAGLGGC--ALSQIGNVGPDLGQAYIIDSFMVVVLGGVGQLAGTIVGAFG 507 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 L + + +++ + L I R L L+ S Sbjct: 508 LGIINKFIEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 552 >gi|84499419|ref|ZP_00997707.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] gi|84392563|gb|EAQ04774.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] Length = 400 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 134/361 (37%), Gaps = 32/361 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 I+ +L + P LL F + ++ + + +I+ +FA G +I+ G G LS Sbjct: 12 LIIVAILTMAAPFLLNPFPTESGMAQFNAGYPDLMQKFVIFGIFAIGFNILFGLTGYLSF 71 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +G+Y+ V + G ++ I +S ++SG +++G+ +L+ G Y +I TL Sbjct: 72 GHAAFLGVGSYACVWMFKLLGYNVLPGILLSIVVSGLFALLIGVITLRRSGIYFSILTLA 131 Query: 129 MSEIFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS-------- 175 +++ + +TNG+ G+ V + R F S Sbjct: 132 FAQMSFALAYSVLSNPKFNLTNGETGLQVYADDPQWFHSDRLPDLPHLFGLSMRATHRME 191 Query: 176 ---FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + YY+ + L + + + R+ R ++ NQ+ L Sbjct: 192 LGAWEFQFNVGYYMCAVIMLLCFYLAIRIFRSPFGLMLRAVKSNQQRMNYTGLNSRPYTL 251 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 +AF +S + G+AG +A + +++ + V+ + ILGG +L ++ Sbjct: 252 AAFVISGMYAGLAGGLLSAVDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGLIK 311 Query: 293 GVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSHSL 339 + +N + F + + LV++ L Sbjct: 312 YFENIFSKINESVLHGWFGFLPDGLEDFVITLVYPFVGKGWHLTLGVIFMLVVIFLPGGL 371 Query: 340 L 340 + Sbjct: 372 V 372 >gi|222081729|ref|YP_002541094.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726408|gb|ACM29497.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 353 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 64/330 (19%), Positives = 134/330 (40%), Gaps = 15/330 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + LLLF+ + S ++ S+ I L+ + L++++G GL+SL +IG Sbjct: 24 AVIAGLLLLFVAVPLGASDYWLSSIIIPTLVMGLAGISLNLLMGYAGLVSLGSAAFMSIG 83 Query: 78 AYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 A++ ++ L + +++ VS +++ A G++ GLP+L+ +G YL +TL F+ + Sbjct: 84 AFTAYNLILRAPFLPLPVVLLVSGLVAAAAGVVFGLPALRIKGFYLGASTLGAQFFFEWV 143 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + +N + ++ F + Y + + + Sbjct: 144 FSNFTWFSNDSQSLTISAPRL-------------AFLGRDLQSPAGRYLLAISVATALIG 190 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDR 255 + + ++ + W IRD A + I KL A+A+SS F+G+ G + A Sbjct: 191 LAFLIVKSRLGREWMAIRDMDTAASVIGIRIARRKLQAYAISSFFLGVTGVLWGFAYLGT 250 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 F ++ V+ IV++GG ++ A ++ L + S L + Sbjct: 251 SDAHTFNLDKSFQVLFIVLIGGTATIFGNFLGAAFIVLTPILLDRIVLAANLSFLGDQGA 310 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + + L+++ L L Sbjct: 311 LTNLQRVIFGVIIILILIKEPDGLAALIRR 340 >gi|110680050|ref|YP_683057.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] gi|109456166|gb|ABG32371.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] Length = 399 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 56/378 (14%), Positives = 128/378 (33%), Gaps = 36/378 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKS------QKYIDSMGIQILIYVMFAWGLSIVVGSL 63 K +L ++A + F+ + + +++I+ +FA G +I+ G Sbjct: 7 KDTTLLLIVACLTMFAPFILNPFPEGSAMAQFNAGYPDLMQRLVIFGIFAIGFNILFGLT 66 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G LS +G+Y+ + + +++ I VS +I+G +++G SL+ G Y + Sbjct: 67 GYLSFGHAAFLGVGSYAAIWMMKLLTMNVIPAIMVSVLIAGLFSLLVGWISLRRSGIYFS 126 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVA---------------DRLYFLGTTVRSLIR 168 I TL +++ ++ G + Sbjct: 127 ILTLAFAQMSYSLAYSVLTPITGGETGLQPKVNDPRILDSALEPGQNPRANLFGLEMNQS 186 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 + +V YY+ + L+ + + + R+ R ++ NQ+ Sbjct: 187 YELAMGGWVFTFNAGYYIAALVMLLAFYLSIRIFRSPFGMMLRAVKSNQQRLNYTGLNAK 246 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 L+AF +S + G+AG A ++ + ++ + V+ + ILGG +L Sbjct: 247 PYTLAAFVISGMYAGLAGGLLVAMDTQVGAERMFWTASGEVVLMTILGGAGTLIGPVLGA 306 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMR 335 + + + +N F + + +V++ Sbjct: 307 GFIKYMENIVSKINKTVLEQWFAFMPDGIEDFIITIVYPFVGKGWHLTLGLLFMMVVIFL 366 Query: 336 SHSLL--RLRTPSNFLER 351 L+ + F + Sbjct: 367 PGGLVQGGQKVAGLFRRK 384 >gi|84516517|ref|ZP_01003876.1| branched-chain amino acid ABC transporter, permease protein [Loktanella vestfoldensis SKA53] gi|84509553|gb|EAQ06011.1| branched-chain amino acid ABC transporter, permease protein [Loktanella vestfoldensis SKA53] Length = 398 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 111/333 (33%), Gaps = 28/333 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + +I+ + A G +I+ G G LS +G+Y+ + ++I Sbjct: 39 NAGYPDLMQRFVIFGILAIGFNILFGLTGYLSFGHAAFLGVGSYAAIWSMKLVTMNIIPS 98 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + +++G +++G SL+ G Y +I TL +++ ++ G Sbjct: 99 IIFAVIVAGVFSLVVGYISLRRSGIYFSILTLAFAQMSYSLAYSVLTPITGGETGLQIKS 158 Query: 156 LYFLGTT---------------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + + + YYV + +S + Sbjct: 159 TDTPLLDKALEAGEIGRANLFGYGMGSSYQLELAGWQFTFNLGYYVAAVVMLISFYFAIR 218 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + R+ R ++ NQ+ + L+AF +S + G+AG A ++ P+ Sbjct: 219 IFRSPFGMMLRAVKSNQQRMNYAGLSPKPYTLAAFVISGMYAGLAGGLLVAMDTQVGPER 278 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 ++ + ++ +VILGG +L + + +N F Sbjct: 279 MFWTASGEIVIMVILGGAGTLLGPVLGAGFIKYFENIISKINESILQGWFAFLPDGLQDF 338 Query: 321 TTL-------------MVIALFLVILMRSHSLL 340 + I LV++ L+ Sbjct: 339 MVAVVYPFIGKGWHLTLGIMFMLVVIFLPGGLI 371 >gi|313122404|ref|YP_004038291.1| branched-chain amino acid ABC-type transport system, permease component [Halogeometricum borinquense DSM 11551] gi|312296748|gb|ADQ69344.1| branched-chain amino acid ABC-type transport system, permease component [Halogeometricum borinquense DSM 11551] Length = 656 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 129/324 (39%), Gaps = 15/324 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 AVV L + Y ++ +LI+ +FA L +V+G GL+SL + Y +GA Sbjct: 319 AVVTALAVVPLFAELTGITYAVTLLEDMLIWALFALSLDLVLGYAGLVSLGHALFYGVGA 378 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ V+ S+++ + V+ ++ A ++G S++ G + A+ TL +++F N + Sbjct: 379 YAAVLSLMHVTPSVFVALAVAIIVCAAIAWVIGYLSIRVSGVFFAMITLAFAQLFYNAVF 438 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K+K V G + F + + YY L+ + + Sbjct: 439 KFKWTGGSDGLFGVDTFYGLAGVGIDLSAFELAFGPVILDGGLVRYYFLVLVVVGGYLLA 498 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R + IR++++ + + K AF VS G+AG FAA+ ++P Sbjct: 499 RRLIRAPFGTVLQAIRESEERASFVGYDVTAYKRRAFVVSGGLAGLAGGLFAANNGYVAP 558 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + VI + +LGGM +L + + ++ + Sbjct: 559 SFLHWIHSGEVIVMTVLGGMGTLYGPMLGAGVFVAFEDILSSYIDQW------------- 605 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 ++ L ++ L+ L Sbjct: 606 --QLVIGTLFVLFVIFVPRGLVSL 627 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 105/304 (34%), Gaps = 27/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97 + + ++YV+ A GLSI+ G + +++ +A+GAY ++ I G W+ + Sbjct: 11 VLNGLTVGMVYVLLAAGLSIIFGVMDVINFAHGELFALGAYFAFAIAAPLGGAGFWVALV 70 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + ++ GM + +++ + ++++ I+ GKA Sbjct: 71 AAPLLVAVVGMGIERLAVRRLYGRDPLYHILLTFGLVLIINDLITAVWGKAAKPFPIPAA 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 Y ++ Y +++ L+ L L RT R ++ Sbjct: 131 LDQP----------VTLLGFTYSLYNYGIVIFGAMLAIGTWLLLNRTKFGMIIRAGSQDR 180 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + +L + F +A G+AG A ++ S I IV+LGG Sbjct: 181 EMVRNLGINVDTYYTLTFGFGAALAGVAGIVLGAFQNV--SPTMGNSVIIPAFVIVVLGG 238 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S + V L + ++ + + V+L+R + Sbjct: 239 LGSFRGAVVGGLFVGVVQTLARTYTPFLEG--------------LIVFLLMIAVLLVRPN 284 Query: 338 SLLR 341 L Sbjct: 285 GLFG 288 >gi|18181869|emb|CAD20766.1| integral membrane protein [Rhizobium leguminosarum bv. viciae] Length = 331 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 122/311 (39%), Gaps = 25/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 +YI I LI+++ A GL+++VG GLLSL + IGAY+ +L YG Sbjct: 31 PFIGSRYITHSLIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAYTAGLLAVTYGTP 90 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 ++ + + +SG + +G+P+L+ R + TL I Q I W +T G G+ Sbjct: 91 FYVNLIAAGAVSGPVALPLGIPALRLRSTSFVMCTLGFVIIGQAIAKNWVSLTRGDMGLS 150 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + YF S V YY+ L + L+ + + R+ Sbjct: 151 SIPKPYFEL----------GPLSFTVSGTTNFYYLALIIGTLATFAVWAIVRSPAGRNMV 200 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IR+N+ SL KL F +S+ F G+ G +A +SP F+ + ++ Sbjct: 201 AIRENETLAESLGVPTWHYKLIVFMISAVFAGVGGCLYAYYLTVVSPLTFQMYYSTTMLI 260 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 IV+ GG +S + + +G+ E + L ++ Sbjct: 261 IVLGGGAGMISGTVFGSLLFVGLTEALR---------------ITPELRMIAYGVCLLVL 305 Query: 332 ILMRSHSLLRL 342 + L Sbjct: 306 VFWFKKGCAPL 316 >gi|56420196|ref|YP_147514.1| branched-chain amino acid ABC transporter permease [Geobacillus kaustophilus HTA426] gi|261419897|ref|YP_003253579.1| inner-membrane translocator [Geobacillus sp. Y412MC61] gi|319766712|ref|YP_004132213.1| inner-membrane translocator [Geobacillus sp. Y412MC52] gi|56380038|dbj|BAD75946.1| branched-chain amino acid ABC transporter (permease) [Geobacillus kaustophilus HTA426] gi|261376354|gb|ACX79097.1| inner-membrane translocator [Geobacillus sp. Y412MC61] gi|317111578|gb|ADU94070.1| inner-membrane translocator [Geobacillus sp. Y412MC52] Length = 345 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 129/324 (39%), Gaps = 28/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + L L + Y M I+++ +GL++ G G LSL +AIG Sbjct: 9 LWIAVLAALALAFPLLVTNSYYLHMMTISFIWMIAVYGLNLFAGYTGYLSLAHAGFFAIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL + G+ WL ++ + + G ++GL +L+ + + AI TL + I I+ Sbjct: 69 AYALGILTVKAGVPFWLAFVLACLFTTLLGAVIGLVALRTKEHFFAIYTLCVGYIIYLII 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW +T G G + YY++L Sbjct: 129 DKWDSLTGGVRGFIGIPAPAD-------------IGPLSFQTPVAQYYLVLCFLVAVIFT 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + + IR++++ +L + + KL++F +S F +AGA +A+ + Sbjct: 176 MYRLVYSLTGRTYIAIRNSEELALTLGISTMKNKLASFVLSVFFTSLAGALYASFIRFLG 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD+ S ++ +++GG+ +L+ T ++ + + + Y Sbjct: 236 PDIAYVSVMFDFLTYLLVGGIGTLAGPVVGTLLITFLSQQLQFLQDY------------- 282 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + L L+I+ H + Sbjct: 283 --RMLIFGPVLTLLIIFYPHGIAG 304 >gi|310778219|ref|YP_003966552.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Ilyobacter polytropus DSM 2926] gi|309747542|gb|ADO82204.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Ilyobacter polytropus DSM 2926] Length = 330 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 71/329 (21%), Positives = 137/329 (41%), Gaps = 41/329 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ +V + FL + Y + I + I ++ A L++V+G G L+L + Sbjct: 12 GIVVMVIYSIFFLLIQTGALNPYYGQILIVLGINIILAVSLNLVIGFTGQLALGHAGFMS 71 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IG Y+ I+ Y L ++ + + ++S G ++G+P L+ +GDYLAI TL EI + Sbjct: 72 IGGYTAAIMSLNYNLPFFISLVIGGLVSAVIGFLIGMPILRLKGDYLAITTLGFGEIIRV 131 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ + G G+ + + + + Sbjct: 132 AVVNMDFL-GGPRGLAGIPKKTNFT-------------------------WVYFITLFTV 165 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 II + R+ A +IR+++ A S+ K+ AF ++S F G+AG +A Sbjct: 166 IIIYNIIRSPYGRAMLSIREDEIASESMGINTTKFKMMAFVIASFFAGIAGGLYAHQFMF 225 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + P F F ++ +++ V+ GGM SLS AT +L + E+ Y Sbjct: 226 LDPKSFDFLKSFEILTFVVFGGMGSLSGSLMATTVLTYLPEVLRTFAEY----------- 274 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + +L +++L R ++ + Sbjct: 275 ----RMIIYAASLVMLMLFRPQGIMGNKE 299 >gi|260890490|ref|ZP_05901753.1| hypothetical protein GCWU000323_01660 [Leptotrichia hofstadii F0254] gi|260859732|gb|EEX74232.1| high affinity branched-chain amino acid ABC transporter, permease protein [Leptotrichia hofstadii F0254] Length = 336 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 75/353 (21%), Positives = 137/353 (38%), Gaps = 48/353 (13%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ F+ K + + + ++L + Y + I ILI+V+FA L+I V Sbjct: 1 MNYFNKLNVKNYVVTFISIIALYIVLSFTFDPNDAFSYTKGIYINILIFVLFAVSLNITV 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLP 113 G +G L+L AIG YS + L + L+ +++ G ++G Sbjct: 61 GLMGQLNLGQAGFIAIGGYSAAFISKILVNYNLPPFLQLILVSLFGGLVAAVFGFLVGGS 120 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 +L+ RGDYLAI TL EI + I+ + + L F T +I Sbjct: 121 TLRLRGDYLAIITLAFGEIVKYIIQNLDFLGGATGLNNIPTILDFSNTYFIVVISIIVIA 180 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + +IR+++ A ++ + KL Sbjct: 181 MAMT--------------------------SRKGKEILSIREDEIAAENIGIGLNRVKLY 214 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 FA S+ F G+ G+ FA + ++PD F F +I ++ +V+LGG+ S++ A IL Sbjct: 215 GFAFSAFFAGVGGSLFAHNIGILTPDKFGFLFSIEILVMVVLGGLGSITGAIIAATILTL 274 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + E + + + I L +++ R + + + Sbjct: 275 LNERLRDV---------------SQFRYLVYAIILISLMIFRPKGIFGTKEFT 312 >gi|146342436|ref|YP_001207484.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146195242|emb|CAL79267.1| Putative branched-chain amino acid ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 332 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 69/327 (21%), Positives = 119/327 (36%), Gaps = 30/327 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 + L + +Y + Q + + A GL++ +G G +SL +GAY IL Sbjct: 17 IAGLIIIPMNFNRYGLYILSQWAVMTIAAMGLNLTLGYAGQVSLAQGAFVGMGAYGAAIL 76 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + + + + +I G ++G P+L+ + YLA TL S + + +T Sbjct: 77 TTHGWP-LIAALGLVIVICFIVGWLLGYPALRVQHHYLAFVTLAFSTLMFLVFRNETWLT 135 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 NG GI R + YY+ LG L + WL R+ Sbjct: 136 NGIYGISNIPRPEVF--------------GFPTRKPLPFYYLCLGSLALVTLAMWWLIRS 181 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A+ +R+N SL L AFA+ S G+AG +A + P F Sbjct: 182 PWGRAFMALRENPIRAQSLGIDTRRYTLMAFAIGSVLGGIAGVLYAPLTQYVDPVPFNLQ 241 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 ++ ++ +VI+GG + I + + E YY L Sbjct: 242 LSLDLLMMVIVGGAGFMLGPFLGAMIAVLLPEWLRVAEGYY---------------LMLY 286 Query: 325 VIALFLVILMRSHSLLRLRTPSNFLER 351 IA+ +++ +L + R Sbjct: 287 AIAVIALLIYSPTGILGILDRYLSSRR 313 >gi|218516129|ref|ZP_03512969.1| amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 369 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 107/260 (41%), Positives = 154/260 (59%), Gaps = 4/260 (1%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + K L V+YP+++ +GA S K++D+ GIQILIYVM AWGL+IVVG GLL L Sbjct: 105 RHFLKFALLALVLYPVVIVALVGAQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 V YA+GAYSY +L S +GLS W+L+P+S ++ G+I+G P L+ RGDYLAI TL Sbjct: 165 GYVAFYAVGAYSYALLSSYFGLSFWVLLPLSGTLAALWGVILGFPVLRLRGDYLAIVTLA 224 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184 EI + +LI W +T G GI + G + F P S Y+IF++ Sbjct: 225 FGEIIRLVLINWTDVTKGTFGISSIPKATLFGIPFDATAGGFAKLFHLPMSSAYYKIFLF 284 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++L +C L+A + + LRR I AW +R+++ A SL + KL+AFA + F + Sbjct: 285 YLILALCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFRRL 344 Query: 245 AGAFFAASRDRISPDMFKFS 264 +FFAA + +SP+ F F Sbjct: 345 RSSFFAARQGFVSPESFIFL 364 >gi|302342447|ref|YP_003806976.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075] gi|301639060|gb|ADK84382.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075] Length = 350 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 62/329 (18%), Positives = 123/329 (37%), Gaps = 19/329 (5%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ F + + Y + I I+V+ A GL+++ G G +SL Sbjct: 23 RVAMAAFAVLLLAFPFFSDWLSGLTNLYWLGIMTHICIFVLGAQGLNLLTGFTGQISLGH 82 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 A+GA++ +L G + L I +++ A GMI G+PSL+ RG YLAIATL Sbjct: 83 GAFMAVGAFTAGVLHMDLGWNFLLAILAGGLMAAALGMIFGVPSLRLRGLYLAIATLAAQ 142 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 I +L + + YY+ L Sbjct: 143 IIIIWLLRGVFE-------------------AGAVEVSDATLFGFSFDTDQRKYYLCLFF 183 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L + L RT A+ +RD + + + ++ +F +SS +G+AG +A Sbjct: 184 AALGTLYLKNLMRTRTGRAFVAVRDRYLSAEVIGVNLFKYRILSFGISSFMVGLAGGLWA 243 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + ++ + F + ++ ++ +I+GG+ ++ L + L Sbjct: 244 FTENAVTDEAFGVALSVKYLAYIIVGGLGQVTGAIFGVTFLELLHWLLEVPTDALSRIFP 303 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + + + + ++ L Sbjct: 304 NIFEKLASLREIVFGLIVIVFLIFEPDGL 332 >gi|148260058|ref|YP_001234185.1| inner-membrane translocator [Acidiphilium cryptum JF-5] gi|146401739|gb|ABQ30266.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidiphilium cryptum JF-5] Length = 328 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 126/325 (38%), Gaps = 26/325 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + A + L L + + ++L+Y M A GL++++G G LS + + Sbjct: 22 ISAAIIWLALLFVPIWLPAVGGFTDLASRVLVYAMAATGLNLLLGYTGGLSFGHAAYFGL 81 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY + S+ L + ++ G G+++G +K +G Y ++ T+ ++F + Sbjct: 82 GAYGTGLFIIHVIPSMPLALIAGTLLGGIGGILVGPMVMKRKGIYFSMITIAFGQMFYFL 141 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++W +T G+ G T S + + + YYV+L + + Sbjct: 142 AVRWNTVTGGEDG-----------LTGFSRVPLHLGGETINLGPARFYYVVLALFAVVML 190 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + R+ + +A+ R+N L + AFA+S+ +AG+ A Sbjct: 191 VVWQILRSPMGHAFVATRENTTRLRFLGVAVDKQVWVAFAISAFITALAGSLNAMLTAFA 250 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SPD ++ + + I +LGGM S I I + + Sbjct: 251 SPDDLQWQLSGSFVVICVLGGMRSFWGPFLGAVIYIVAQDYLSSV--------------- 295 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 T + + L +L LL Sbjct: 296 TQNWMTYIGLIFVLSVLFFPQGLLG 320 >gi|121281862|gb|ABM53495.1| putative permease protein LivM [uncultured bacterium CBNPD1 BAC clone 67] Length = 315 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 68/325 (20%), Positives = 128/325 (39%), Gaps = 31/325 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 VV L+ L Y + + I+ + A GL++++G G +SL +G Sbjct: 10 AIVVGLGLVLAILPLLFPSNYYFRVAAIVNIFALAAVGLNLLMGYAGQVSLGHAGFIGLG 69 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS I + +GL + A++S ++G P L+ +G YLA+ATL + L Sbjct: 70 AYSVAIGATHFGLHGLAAAGIGAVLSAVVAFLVGRPILRLKGHYLAVATLGFGLLIAMAL 129 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 T G G+ V F YY+ G+ L + Sbjct: 130 TNEASWTGGPDGMGVPRIEVFGTRLRGPDTW---------------YYISAGVLLLGVIL 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L + A R I D++ A + KL F +S+ + +AG+ A I+ Sbjct: 175 ALNLIESPTGRAMRAIHDSEIASRVAGIDVASYKLKIFVLSAVYASVAGSLLAFLNGHIT 234 Query: 258 PDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 PD F ++ ++++V+LGG+ S+ A+L+ + + + Y Sbjct: 235 PDGTAGFLRSVELVTMVVLGGLGSVIGAITGAAVLVILPQALTIFHDY------------ 282 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 ++ + + + +++ ++ Sbjct: 283 ---EHLMLGLMIMVSMILLPRGIIP 304 >gi|291615145|ref|YP_003525302.1| inner-membrane translocator [Sideroxydans lithotrophicus ES-1] gi|291585257|gb|ADE12915.1| inner-membrane translocator [Sideroxydans lithotrophicus ES-1] Length = 365 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 102/349 (29%), Positives = 157/349 (44%), Gaps = 8/349 (2%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +RLN++ LAV L F+ + L+Y+M A GL+IVVG GL Sbjct: 1 MRLNRFLTRHFALAVALLALPFIIDALFGHG--WVRITDFALLYIMLALGLNIVVGYAGL 58 Query: 66 LSLNCVIAYAIGAYSYVILGSR---YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 L L + YA+GAY+Y +LGS I++++P+ A+I+ G+++G P+LK RGDYL Sbjct: 59 LDLGYIAFYAVGAYTYALLGSPQFGLHWPIYVVLPLGALIACVFGVLLGAPTLKLRGDYL 118 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI + L N G + L S + + V Sbjct: 119 AIVTLGFGEIIRIFLNNLNAPVNITNGPQGITGIDPLQVGGFSFGSSYEWMGIRVDDVHL 178 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY+ L L + L + I AW IR+++ A ++ KL AFA+ + F Sbjct: 179 HYYLFLAFTLLVIFVSRRLENSRIGRAWVAIREDEVAASAMGINTRNIKLLAFAMGATFG 238 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G++G FA + +SP+ F E+I+V+ +V+LGGM ++ + +L+ + EL Sbjct: 239 GISGGLFAGFQGFVSPESFSLMESIMVLCMVVLGGMGNVGGVVLGGVLLVALPELFRNAA 298 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIAL--FLVILMRSHSLLRLRTPSNFL 349 +LL LM L LV+L R L Sbjct: 299 GPVQQALLGKVVLDPESLRMLMF-GLALILVMLWRPAGLWPSTQRRREF 346 >gi|296327741|ref|ZP_06870280.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155088|gb|EFG95866.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 326 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 138/335 (41%), Gaps = 45/335 (13%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L V +LF + + +Y + I ILI V+ A L++ VG LG ++L +I Sbjct: 14 VLLTVLYFILFSLISSGFISRYQVGILILILINVILAASLNVTVGCLGQITLGHAGFMSI 73 Query: 77 GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 GAY+ +L + + + +++G G I+G+P+L+ GDYLAI TL EI Sbjct: 74 GAYTAALLTKSGLLSGYPGYVVALIIGGLVAGIIGFIIGIPALRLTGDYLAIITLAFGEI 133 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +LI++ T G G+ R+ ++ + Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LIYFITI 167 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S + + + A IR+++ A + + K AF +S+ F G+AG +A + Sbjct: 168 FSVIFMYSVMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + F ++ +I ++ +V+LGGM S + + +L + E+ Y Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R LL Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307 >gi|126731167|ref|ZP_01746975.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] gi|126708469|gb|EBA07527.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] Length = 643 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 110/321 (34%), Gaps = 26/321 (8%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--- 86 + A+++ IY + A GL+I G +G++++ +GAY+ ++ Sbjct: 344 VAASQTADLALDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQFVP 403 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 Y +S+ + +P++ I+ A G+ M +++ + + TL+ + L + G Sbjct: 404 NYTVSLVVALPLAFAITFAAGVAMERLVIRW-LYHRPLETLLATFGISIALQQLAKNIFG 462 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + + + + + + ++ L++T + Sbjct: 463 TQARPLTSPA---------WLDGNLAFNEVISISYIRIAIFVLALLFLGLLLFILKKTRL 513 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R + N S+ K+ F + S G+AG S + Sbjct: 514 GLEVRAVTQNPGMAASMGINPDRIKMMTFGLGSGIAGIAGVAIGLYAKVTSEMGSDYIVQ 573 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + +V + ++ ++ + + F+ S + T M++ Sbjct: 574 SFMTVVVGG--VGNVWGTLAGAGLIGILQ-----------KGIEWFNPSNTLAAQTYMIL 620 Query: 327 ALFLVILMRSHSLLRLRTPSN 347 + L I R ++ L+ + Sbjct: 621 FIILFIQFRPKGIVALKGRAA 641 >gi|326796852|ref|YP_004314672.1| Monosaccharide-transporting ATPase [Marinomonas mediterranea MMB-1] gi|326547616|gb|ADZ92836.1| Monosaccharide-transporting ATPase [Marinomonas mediterranea MMB-1] Length = 599 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 50/332 (15%), Positives = 110/332 (33%), Gaps = 31/332 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ + L + ++ I +Y + GL ++ G G+ S + A Sbjct: 5 ILIILVACVALLAPLVLPSFQITLLNYIGLYALVVLGLVLLTGVGGMTSFGQAAFVGLSA 64 Query: 79 YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 Y+ S S W + +++ A +I+G +L+ G YL + T+ Sbjct: 65 YTTTYLTTTAALPDWLSWTNGSPWFGLVFGLLLTAAIALILGALTLRLSGHYLPLGTIAW 124 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 G G+ L F + +YV+ Sbjct: 125 GISLYYFFGTMTS-MGGHTGVSDIPPLTFFRLILDQGEEM--------------FYVIWV 169 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + I L + A R ++ Q ++ +K+ AF +S+ F ++G + Sbjct: 170 ILAAAMFITHNLLSSREGRAIRALKGGQLMAEAMGVNTFRSKMIAFVISALFAALSGWLY 229 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A ++ I+P F I + + ++GG++S+ L + + + S Sbjct: 230 AHTQRFINPSPFGLHMGIDYLFMALIGGVSSVWGALLGAGTLTIMKQWLEDLLPLILGSD 289 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + + L++ L Sbjct: 290 -------GQYESIVFGLLIVLLMQRSPSGLWP 314 >gi|227820497|ref|YP_002824468.1| branched-chain amino acid ABC transporter [Sinorhizobium fredii NGR234] gi|227339496|gb|ACP23715.1| putative branched-chain amino acid ABC transporter [Sinorhizobium fredii NGR234] Length = 323 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 122/328 (37%), Gaps = 30/328 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA + L L L Y + L+Y + A GL++ +G G +SL IG Sbjct: 6 LATLVAGLAILILLPLTQSNYGVFVLCSWLVYSISAMGLNLTLGYAGQVSLAQASFMGIG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY ++ + + ++ G ++G P+L+ + +LA TL + + +L Sbjct: 66 AYVTALMTMAGVPWP-AAMIAAMVLCFVIGFLLGYPALRVQHHFLAFITLAFNALVVLVL 124 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + +T G GI R + Y+ +L + L A Sbjct: 125 RNEEWLTGGTYGIVGIPRPE--------------VLGLPTQTPLAFYFFVLALFVLMAVA 170 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + R+ ++ +R+N SL I L AFA+ S++ G+AG+ A I Sbjct: 171 LYGIIRSPWGRTFKALRENPIRANSLGVDIRKTTLLAFAIGSSYGGLAGSLLAQLTQFID 230 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + ++ V+ +VI+GG +++ E YY Sbjct: 231 PHSFGLTISLKVLLMVIVGGAGFFFGPILGALLIVLAPEFLRFTEGYY------------ 278 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + ++++ LL L Sbjct: 279 ---LMIYATLVIVLMVFCPTGLLGLVER 303 >gi|55379694|ref|YP_137544.1| branched-chain amino acid ABC transporter permease [Haloarcula marismortui ATCC 43049] gi|55232419|gb|AAV47838.1| branched-chain amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 363 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 129/332 (38%), Gaps = 15/332 (4%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + +I +L V + +F FL Y + +LIY +FA G I++G GLLS Sbjct: 32 RDREISTVLLTVVGVAVFPFLFNNFLDGY-TQLATLMLIYGIFAVGFDILLGYTGLLSFG 90 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + + AY+ I + S L++ + I+G SL+ G Y A L + Sbjct: 91 HAVFFGGAAYAAGIFSASVSSSPLLVLLAGTAFAVLLAWIVGFLSLRRGGIYF--AILTL 148 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + + P+ G + I ++ + +Y + Sbjct: 149 TFGQMSFYLAASPLAFLTNGENGFTSVDIGSLLGVIDIHGGVPFPLSMLVDNMLYVFVAV 208 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 M LS ++ + + +R IR+N++ + + KL AF +S+AF G+AG+ F Sbjct: 209 MTVLSVAMANRILHSPYGTVFRAIRENERRAEFVGLDVWRYKLMAFIISAAFAGIAGSLF 268 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + + ++E+ ++ + +LGG+ SL + + + + G Sbjct: 269 TIEGNYVPLQSLYWTESGRIVIMTVLGGVGSLFGPLFGAGLYLYIENIVSGFE------- 321 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + ++ + + +++ + + Sbjct: 322 -----TLGPFWHLILGVVFVVAVILFPNGIWG 348 >gi|23012896|ref|ZP_00052878.1| COG4177: ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 356 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 64/324 (19%), Positives = 131/324 (40%), Gaps = 18/324 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +L Y+ ++ IQI Y + A GL+I+VG G +SL + GA+ Sbjct: 31 WCMAGILLAAAAPLVLSNYLMALLIQIGFYGIAALGLNILVGCTGQISLGHAAFFGFGAF 90 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L + +G+ + L IP++ +++ G++ G+P+ + +G YLAIAT I ++ + Sbjct: 91 ASAWLNNTFGIPVLLAIPLAGVMTTLLGLLFGIPAGRLKGLYLAIATFASQFILEDFFAR 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G +G F F+ VI + Sbjct: 151 ANWFTGGSSGAMANPISLFGYEVGGDKGFFYVVLVFVVI---------------MYGLGT 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ A+ +RD+ + + + ++ +F +SS + G+ GA + +S + Sbjct: 196 NLLRSRDGRAFVAVRDHYLSAEVMGINLTKYRILSFGISSFYAGVGGALYGHYLGYVSAE 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF---YYFNSLLKFDCSF 316 F +I + ++I+GGM S+ T ++ + E ++ + + Sbjct: 256 GFTILLSIQFLGMIIIGGMGSVMGTLMGTTFMVLLPEATEAAVSTVKHFTGDIPALTSAL 315 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 + +A+ L ++ L+ Sbjct: 316 AYIKEASIGLAIVLFLIFEPDGLV 339 >gi|288553812|ref|YP_003425747.1| ABC transporter permease [Bacillus pseudofirmus OF4] gi|288544972|gb|ADC48855.1| ABC transporter permease protein [Bacillus pseudofirmus OF4] Length = 341 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 126/328 (38%), Gaps = 31/328 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++ + + M QI I+ +FA I++G G++S + + IG Sbjct: 12 LTLLVLAIGLAIFPFVSDSRTALIMLTQIFIFAVFAMSYDILLGYTGIVSFGHAMFFGIG 71 Query: 78 AYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY+ I + + ++ I ++ + +G ++G+ +L+ + + A+ TL +S +F Sbjct: 72 AYTVAICLKMFGSTMPAFFVAIVLTLIFTGVVSYLVGILTLRLKSHFFAMLTLAVSSLFL 131 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 KW+ +T G G F + Y + L + + Sbjct: 132 VTAEKWRSLTMGNDGFTFVVPELFRDR-------------------VSFYLIALVLLVGT 172 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + ++ + + IR+N+ SL ++ K+ A V+ G+AG +A S Sbjct: 173 YIFLDRFTQSPMGKVLQAIRENEPRVESLGFKVMHYKVIANVVAGMVAGLAGILYAMSLR 232 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++ + ++ V+ I I+GG+ +L AI+ + ++ Sbjct: 233 FVNTAVLSVELSLDVLLITIIGGVGTLFGSVVGAAIIELARHGLMDLAKVHW-------- 284 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 R L I LV++ ++ Sbjct: 285 -IFERWVILFGIIFILVVMFFPKGIVGT 311 >gi|227824482|ref|ZP_03989314.1| inner-membrane translocator [Acidaminococcus sp. D21] gi|226904981|gb|EEH90899.1| inner-membrane translocator [Acidaminococcus sp. D21] Length = 315 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 131/332 (39%), Gaps = 41/332 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L++ L + + + I+I ++ A L+++ G G S+ +A Sbjct: 12 LGFCAALFAVLYVLLEMEIIGAFWELNLVLIIINIILATSLNMINGYTGQFSIGHAGFFA 71 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY I+ + G + + + + +G G ++GLP+L+ GDYLAIATL + EI + Sbjct: 72 VGAYMGAIMTVKLGYDMPVALIAGTLSAGLLGFLVGLPTLRLNGDYLAIATLGLGEIIRI 131 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ + + G +G+ RL + + Sbjct: 132 CILNIEYV-GGASGLMGIPRLTTFP-------------------------LAFWIMIAIL 165 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I + +A A IR+N+ A ++ K+ AF + ++F G AG F+ Sbjct: 166 FFIKNFKNSAYGRACLAIRENEIAADTMGIDTTCYKVMAFTLGASFAGTAGVLFSHYFFI 225 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P F F + ++++V+LGG+ S++ +L + Sbjct: 226 AHPASFTFMRSFDILTMVVLGGLGSMTGSITGAIVLTFISAALS---------------D 270 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F + IA+ +++L R L + S Sbjct: 271 FPEWRMLIYSIAMIVLMLYRPQGLFGDKELSL 302 >gi|254304399|ref|ZP_04971757.1| branched chain amino acid ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324591|gb|EDK89841.1| branched chain amino acid ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 326 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 45/335 (13%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L +V +LF + + +Y + I ILI V+ A L++ VG LG ++L +I Sbjct: 14 VLLIVLYFILFSLINSGFISRYQVGILILILINVILAASLNVTVGCLGQITLGHAGFMSI 73 Query: 77 GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 GAY+ +L + + V +++GA G I+G+P+L+ GDYLAI TL EI Sbjct: 74 GAYTAALLTKSGFLSGYPGYIVALIVGGLVAGAIGFIIGIPALRLTGDYLAIITLAFGEI 133 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +LI++ T G G+ R+ ++ + Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LIYFITI 167 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S + + + A IR+++ A + + K AF +S+ F G+AG +A + Sbjct: 168 FSVIFMYAIMTSRHGRAILAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + F ++ +I ++ +V+LGGM S + + +L + E+ Y Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R LL Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307 >gi|257453185|ref|ZP_05618484.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R] gi|257467351|ref|ZP_05631662.1| branched chain amino acid ABC transporter permease [Fusobacterium gonidiaformans ATCC 25563] gi|315918481|ref|ZP_07914721.1| branched-chain amino acid transport system permease livM [Fusobacterium gonidiaformans ATCC 25563] gi|317059719|ref|ZP_07924204.1| branched-chain amino acid transport system permease livM [Fusobacterium sp. 3_1_5R] gi|313685395|gb|EFS22230.1| branched-chain amino acid transport system permease livM [Fusobacterium sp. 3_1_5R] gi|313692356|gb|EFS29191.1| branched-chain amino acid transport system permease livM [Fusobacterium gonidiaformans ATCC 25563] Length = 329 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 73/342 (21%), Positives = 142/342 (41%), Gaps = 45/342 (13%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I LL + L + L + ++ +Y S+ I I I ++ A L+I VG LG +++ Sbjct: 9 YIISFLLLFLIYLGMTLMIHSSIFSRYQLSVIILICINIILAVSLNITVGCLGQITIGHA 68 Query: 72 IAYAIGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 ++GAY+ + +L + + +++G G+++G+P+L+ GDYLAI TL Sbjct: 69 GFMSVGAYTAALFSKSALVSGVPGFFLALLLGGIVAGVVGIVIGVPALRLNGDYLAIITL 128 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + +LI++ T G G+ + ++ Sbjct: 129 AFGEIIR-VLIEYFDFTGGPQGLRGIPKFNNFD-------------------------II 162 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + S ++ L + A IR+++ A + + K AF +S+ F G+AG Sbjct: 163 YWIMVFSVILMFSLMTSRHGRAVLAIREDEIASCASGINTTYYKTFAFTLSAIFAGIAGG 222 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + + F ++ +I ++ +V+LGGM S + A +L + E+ + Y Sbjct: 223 IYAHNLGVLGAKQFDYNYSINILVMVVLGGMGSFTGSILAAIVLTLLPEMLREFSDY--- 279 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + + L +++ R LL L Sbjct: 280 ------------RMIVYAVILIFMMIFRPKGLLGREEFQLSL 309 >gi|269964419|ref|ZP_06178661.1| putative high-affinity branched-chain amino acid transport permease protein [Vibrio alginolyticus 40B] gi|269830916|gb|EEZ85133.1| putative high-affinity branched-chain amino acid transport permease protein [Vibrio alginolyticus 40B] Length = 355 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 126/322 (39%), Gaps = 17/322 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + ++ + Y ++ IQI + A GL+I+VG G +SL + GA+ Sbjct: 31 LAIAGVIAMLAAPLVLDIYFLNLFIQIAYLGIAALGLNILVGFTGQISLGHGAFFGFGAF 90 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L +++ + + IP++ ++ GM+ GLP+ + +G YLAIATL I ++ + Sbjct: 91 ASAWLNNQFNIPVVFAIPLAGYLTMIVGMLFGLPAARIKGLYLAIATLAAQFILEDFFAR 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + G G F +Y+ L Sbjct: 151 ADWFSGGSYGASANPINLFGFEFTTDE---------------SFFYIALFALIFMYMWAS 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ A+ ++RD+ + + + +L +F V + + G+ GA + +S + Sbjct: 196 NLIRSRDGRAFVSVRDHYLSAEIMGINLTKYRLLSFGVCAFYAGIGGALYGHYLGFVSAE 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG--MNFYYFNSLLKFDCSFN 317 F +I ++++I+GG+ S+ T ++ + E+ F F Sbjct: 256 GFTIMMSIQFLAMIIIGGLGSVKGTLMGTIFIVLLPEVLEFGVTGLSAFGDTTAFTDGLA 315 Query: 318 MRHTTLMVIALFLVILMRSHSL 339 + + + L ++ L Sbjct: 316 YFKEMAIGLVIMLFLIFEPQGL 337 >gi|116695946|ref|YP_841522.1| ABC transporter permease [Ralstonia eutropha H16] gi|113530445|emb|CAJ96792.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 403 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 66/325 (20%), Positives = 136/325 (41%), Gaps = 20/325 (6%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + ++ M +L+Y GL++ G G+ + + IGAY+ +L + Sbjct: 96 LALVALFHESHFVLLMLCAVLLYTTACLGLTVQFGFSGVSNFAGAAFFGIGAYTTAVLAT 155 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 G+ L+I +S + + G ++ P L+ RG Y A+ T+ I ++ + G Sbjct: 156 HTGIPHVLVIVLSGLAAAVIGSVLVAPVLRTRGHYAALVTIAF-GILFKTFLEVNDVLGG 214 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G+ V F S+ F V + + L +C + +++ L R+ + Sbjct: 215 PQGLQVPGMTLFGFAFNESVTLF----GVDVSFYASYALLSLLICAGTFAVVKALERSWV 270 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A +R ++ A + I K+ AF + + F G+AG+ + ++P+ F F+++ Sbjct: 271 GLAMDVVRTDETAAAAFGLHIARWKVIAFMLGNFFAGIAGSVYGMVTAFVAPNNFTFADS 330 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 ++++SIVILGG+ ++ + A I++ + E + Y Sbjct: 331 LLMLSIVILGGLGNVVGLVPAAIIVLVLPEKLQFIQEY---------------RFLFYAA 375 Query: 327 ALFLVILMRSHSLLRLRTPSNFLER 351 + ++L R L+ +T F Sbjct: 376 LVIAILLFRPDGLMPRKTRLFFPRE 400 >gi|254476094|ref|ZP_05089480.1| inner-membrane translocator [Ruegeria sp. R11] gi|214030337|gb|EEB71172.1| inner-membrane translocator [Ruegeria sp. R11] Length = 358 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 137/344 (39%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++ + FL + + + +++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRIRYYAVMA------FAFLVIPFFINDYWANAILLPFLIYSIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ + ++ I+ + GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVLLAGGITALVCVAFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDVFGIIITGPNAPAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L A + L R + +W IRD A + + AKLSAF VS FI Sbjct: 185 TYMFSLIFLTFCALVARNLTRGTVGRSWMAIRDMDIAAEIIGVNPLKAKLSAFGVSGFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F +++ +V+ +VILGG+ S+ A L+ + + Sbjct: 245 GISGALFFAVYLGAVEVGEAFGINKSFLVLFMVILGGLGSIFGSFAGAAFLVLLPVILKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + F ++ + + ++ H + +L Sbjct: 305 VGVDVLGWPTDIVAHF---QLVIVGALIIVFLIAEPHGMAQLWR 345 >gi|28901005|ref|NP_800660.1| putative high-affinity branched-chain amino acid transport permease [Vibrio parahaemolyticus RIMD 2210633] gi|153836692|ref|ZP_01989359.1| ABC-type branched-chain amino acid transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|260366216|ref|ZP_05778676.1| inner-membrane translocator [Vibrio parahaemolyticus K5030] gi|260879857|ref|ZP_05892212.1| inner-membrane translocator [Vibrio parahaemolyticus AN-5034] gi|260894532|ref|ZP_05903028.1| inner-membrane translocator [Vibrio parahaemolyticus Peru-466] gi|260903069|ref|ZP_05911464.1| inner-membrane translocator [Vibrio parahaemolyticus AQ4037] gi|28809518|dbj|BAC62493.1| putative high-affinity branched-chain amino acid transport permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|149750041|gb|EDM60786.1| ABC-type branched-chain amino acid transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|308086450|gb|EFO36145.1| inner-membrane translocator [Vibrio parahaemolyticus Peru-466] gi|308092152|gb|EFO41847.1| inner-membrane translocator [Vibrio parahaemolyticus AN-5034] gi|308108396|gb|EFO45936.1| inner-membrane translocator [Vibrio parahaemolyticus AQ4037] gi|308114878|gb|EFO52418.1| inner-membrane translocator [Vibrio parahaemolyticus K5030] gi|328470907|gb|EGF41818.1| putative high-affinity branched-chain amino acid transport permease [Vibrio parahaemolyticus 10329] Length = 355 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 62/322 (19%), Positives = 129/322 (40%), Gaps = 17/322 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + ++ + Y ++ IQI + A GL+I+VG G +SL + GA+ Sbjct: 31 LAIAGVIAMLAAPLVLDIYFLNLFIQIAYLGIAALGLNILVGFTGQISLGHGAFFGFGAF 90 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L +++ + + IP++ ++ GM+ GLP+ + +G YLAIATL I ++ + Sbjct: 91 ASAWLNNQFNIPVVFAIPLAGYLTMIVGMLFGLPAARIKGLYLAIATLAAQFILEDFFAR 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + + G G + F +YV L Sbjct: 151 AEWFSGGSYGASASPINLFGFEFSTDE---------------SFFYVALFALIFMYLWAS 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ A+ ++RD+ + + + +L +F V + + G+ GA + +S + Sbjct: 196 NLIRSRDGRAFVSVRDHYLSAEIMGINLTKYRLLSFGVCAFYAGIGGALYGHYLGFVSAE 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG--MNFYYFNSLLKFDCSFN 317 F +I ++++I+GG+ S+ T ++ + E+ F+ F Sbjct: 256 GFTIMMSIQFLAMIIIGGLGSVKGTLMGTIFIVLLPEVLEFGVTGLAAFSDNTSFIDGLA 315 Query: 318 MRHTTLMVIALFLVILMRSHSL 339 + + + L ++ L Sbjct: 316 YFKEMAIGLVIMLFLIFEPQGL 337 >gi|304392929|ref|ZP_07374860.1| inner-membrane translocator [Ahrensia sp. R2A130] gi|303294927|gb|EFL89296.1| inner-membrane translocator [Ahrensia sp. R2A130] Length = 534 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 98/319 (30%), Gaps = 18/319 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 L + + I + ++ A GL+I G +G++++ +GAY+ + Sbjct: 233 LAIWANAQNIWYGISLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFAVQEFIR 292 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + L S I+ ++ L + + +L W + Sbjct: 293 ATAPELFGWSLAIALPLAFLVSGTVGLIMERGL--IRFLYGRPLETLLATWGVSLILQQT 350 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + F + ++ + + A++ + RT+ Sbjct: 351 VRSIFGPTNREVGNPDW-MSGAFELGQLSITWNRLWIFVFAMAVFAALFFIINRTSFGLD 409 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + N++ ++ + FA+ S G+AG A S+ S I Sbjct: 410 MRAVTQNRRMAGAMGIRTSWVDAMTFALGSGIAGIAGV--ALSQIGNVSPNLGQSYIIDS 467 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +V+ GG+ +L L + + +++IA+ Sbjct: 468 FLVVVFGGVGNLWGTLVGAMSLGIINKFLEPYAGAVLGK-------------VIVLIAII 514 Query: 330 LVILMRSHSLLRLRTPSNF 348 L I R L L+ + Sbjct: 515 LFIQKRPRGLFALKGRAVE 533 >gi|94309898|ref|YP_583108.1| inner-membrane translocator [Cupriavidus metallidurans CH34] gi|93353750|gb|ABF07839.1| Putative branched-chain amino acid permease protein (ABC superfamily) [Cupriavidus metallidurans CH34] Length = 545 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 80/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + + Sbjct: 271 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFRACAPNAFDWYLVAAVPASFLAAGAVGFA 330 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + + + + Sbjct: 331 LER--IVLRHLYGRPLETLLATFGVSLLMMQAVRTIFGAQNVEVANPAWMSGGIEALAGL 388 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++L + L RT + R N+ + AFA Sbjct: 389 VIPYNRIIIILFALGVVTVAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 448 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I +V+LGG+ L+ L + + Sbjct: 449 GAGIAGLGGC--ALSQIGNVGPDLGQAYIIDSFMVVVLGGVGQLAGTIVGAFGLGIINKF 506 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R L L+ S Sbjct: 507 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 544 >gi|158423383|ref|YP_001524675.1| ABC transporter permease protein precursor [Azorhizobium caulinodans ORS 571] gi|158330272|dbj|BAF87757.1| ABC transporter permease protein precursor [Azorhizobium caulinodans ORS 571] Length = 603 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 91/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S L S I+ + Sbjct: 324 AAIGLAITFGVMGVINMAHGEMVMLGAYTTYVVQDIIRTSYPGLFGWSLAIALPLAFLFT 383 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + S Sbjct: 384 GLVGIIIER--TVIRFLYGRALETLLATWGISLMLQQAVRSIFGPTNKEVGAPSW-MSGA 440 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + ++++ L+RT++ R + N++ ++ Sbjct: 441 FDVGQLSITYNRLWIIVFALLVFFALLVVLKRTSLGLYVRAVTQNRRMAAAMGIRTGRID 500 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ I +V+ GG+ +L L Sbjct: 501 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGALTL 558 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +L +++ + L I R L L+ + Sbjct: 559 GVANKLLEPFAGAVLGK-------------IALLVFIILFIQKRPRGLFALKGRAVE 602 >gi|217969037|ref|YP_002354271.1| inner-membrane translocator [Thauera sp. MZ1T] gi|217506364|gb|ACK53375.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 314 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 70/322 (21%), Positives = 125/322 (38%), Gaps = 26/322 (8%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------ 86 Y M I I IY + A GL+I G GL + +A+GAY+ IL S Sbjct: 4 LGLANYAVFMAILIGIYALLALGLNIQWGFTGLFNAGIAGFFAVGAYTSAILTSLPATGR 63 Query: 87 --RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 Y L + + + + +G L+FR DYLAIAT+ ++EI + ++ +T Sbjct: 64 LGGYELPLVVGWLAAMAAAALIAWPIGKICLRFRSDYLAIATIGIAEIIRLVIRTEGWLT 123 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G+ R + + S I ++ + ++ ++ + Sbjct: 124 GGVRGVTGVPRPFGDLDYMPSQ--------------IAYLAIVATLVLIAYLLVERQVKA 169 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-F 263 R IRDN+ A ++ + +L AF SA +G+AGA F I+P+ Sbjct: 170 PWGRMMRAIRDNELAAAAMGKQVEARRLQAFVFGSALMGLAGALFVHFNRSITPEAIDPM 229 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 ++ ++ILGG + A++ + + + + + Sbjct: 230 IATFLIWIMLILGGSGNNRGAILGAAVIWIIWSVSELLTDRLPTEV---AVQAKYARVFI 286 Query: 324 MVIALFLVILMRSHSLLRLRTP 345 + + L LV+ R +L R Sbjct: 287 IGLTLQLVLRFRPEGILPERQA 308 >gi|220904340|ref|YP_002479652.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868639|gb|ACL48974.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 346 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 109/332 (32%), Gaps = 6/332 (1%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + V+ L ++ T Y + I I + A L+++ G GL SL Sbjct: 8 LLSILVMVLLGCAVWQAETFLGDYQIYIAKLIFINAILALSLNLIYGFTGLFSLGHAGFI 67 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAY + ++ + I + + Sbjct: 68 AVGAYVSALCILPPEQK--EMMWILEPIMWPFSELFTPFWASVLAGGVVATIFAFFIAVP 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + G R+ + T + + Y +L + Sbjct: 126 VLRLGDDYLGIATLGFAEIIRVLIVNATPITNGSLGIKGIPGHATLLACYGWVLF----T 181 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ L + N R IRDN+ A + + + K+ +F + + F G+ GA + Sbjct: 182 LIVLARLVFSNYGNVLRCIRDNEIAARVMGINVFWNKVLSFCIGAFFAGVGGALLGSHLS 241 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I P MF F V+ V+ GG+ SL+ ++ ++E + L Sbjct: 242 TIDPKMFNFLLTFNVLMFVVAGGLGSLTGSLLGATVITILLEWLRAIEEPMDIFGLFELP 301 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + L +IL R ++ R + Sbjct: 302 GIPGMRMVVFSMVLLAIILYRREGIMGTRELT 333 >gi|163757659|ref|ZP_02164748.1| branched-chain amino acid ABC transporter, permease protein, putative [Hoeflea phototrophica DFL-43] gi|162285161|gb|EDQ35443.1| branched-chain amino acid ABC transporter, permease protein, putative [Hoeflea phototrophica DFL-43] Length = 404 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 58/367 (15%), Positives = 121/367 (32%), Gaps = 34/367 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKY------IDSMGIQILIYVMFAWGLSIVVG 61 K +L +A + FL + + +I+ +FA G +I+ G Sbjct: 5 QKKDFALLMFVAALTAFAPFLLNPFPVDSALAQFNAGYPDLMQRFVIFGIFAVGFNILFG 64 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G LS +G+Y+ + +++ I ++ +++G + +G SL+ G Y Sbjct: 65 LTGYLSFGHAAFLGVGSYAAIWSMKLMTMNVIPAIILAVIVAGLFSLFVGWISLRRSGIY 124 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA---------------DRLYFLGTTVRSL 166 +I TL +++ + G + + Sbjct: 125 FSILTLAFAQMSFALAYSVLTPITGGETGLQPKVADPRIFDAALGDGELPAANLFGLTMK 184 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + ++ YYV + L+ + + + R+ R I+ NQ Sbjct: 185 SSYELNIGGWLFTFNAGYYVAAIVMLLAFYMAIRIFRSPFGMMLRAIKTNQTRMNYTGLN 244 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 L+AF +S + G+AG A ++ P+ ++ + V+ + ILGG +L Sbjct: 245 PKPYTLAAFVISGMYAGLAGGLMVAMDTQVGPERMFWTASGEVVLMTILGGAGTLIGPVL 304 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVIL 333 ++ + + +N F + I LV++ Sbjct: 305 GAGMIKYMENIISKINEGVLYEWFAFLPESLQDLLVTIIYPFIGKGWHLTLGIVFMLVVI 364 Query: 334 MRSHSLL 340 LL Sbjct: 365 FLPGGLL 371 >gi|241766622|ref|ZP_04764473.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241363110|gb|EER58728.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 345 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 132/322 (40%), Gaps = 17/322 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L L + Y + + I V + GL+I+ G GL+SL +GA Sbjct: 24 VWLAVAAALLVLFPFMASDYWLYLACLVSINVASSAGLNILTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL S+ G L I ++ G+++G+PSL+ +G YLAIAT+ S I + Sbjct: 84 YTVAILQSQVGSPFLLNILAGGFVAMLGGIVVGVPSLRVKGLYLAIATIAASFIAHFLFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 T G G+ V + +Y++++ + L Sbjct: 144 NL-KFTGGTGGLSVPPA---------------SIFGVLLDTSFRLYWLIVPVTVLMLLGA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT I A+ IRD + L ++ KL +F +SS + G+AG +A ++P Sbjct: 188 ANLLRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++ +I+GGM S+ + V EL + F + + + Sbjct: 248 ESFPLLMSIFFLAAIIVGGMGSILGGILGAVFMTMVPELLK-LVFDLLPNNTELTVFLSP 306 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 T + + + ++ H L Sbjct: 307 VRTIIFGLLIIGFLVFEPHGLA 328 >gi|78043757|ref|YP_361043.1| high affinity branched-chain amino acid ABC transporter permease [Carboxydothermus hydrogenoformans Z-2901] gi|77995872|gb|ABB14771.1| high affinity branched-chain amino acid ABC transporter, permease protein [Carboxydothermus hydrogenoformans Z-2901] Length = 322 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 126/319 (39%), Gaps = 41/319 (12%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 A ++ I I I ++ A L++VVG G S+ A+GAY+ I+ + Sbjct: 29 SAGILSPFVMLNLIIIAINIILAVSLNLVVGFTGQFSIGHAGFMALGAYASAIMTLNFNA 88 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + V A+++G G+I+G+P+L+ +GDYLAIATL ++EI + ++ + Sbjct: 89 PFIVSLLVGAIVAGIGGIIIGIPTLRLKGDYLAIATLGLAEIIRGVITNIDYLGGA---- 144 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 I + + G ++ +I +++ A Sbjct: 145 ----------------------YGLMGITQRTNWLWAFGCMLVTVMVIKNFVQSSHGRAC 182 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 ++R+++ A + K+ AF + S F G+ GA A I P+ F F ++ ++ Sbjct: 183 ISVREDEIAAEVMGINTTKYKVIAFTMGSFFAGIGGALLAHYITFIEPNAFNFLKSFDIL 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +V+LGG SL+ A +L + + Sbjct: 243 VMVVLGGQGSLTGSVVAAIVLTLISTFLQSLAELRLIIYAIILIL--------------- 287 Query: 331 VILMRSHSLLRLRTPSNFL 349 V+L R LL S L Sbjct: 288 VMLFRPQGLLGTHELSFKL 306 >gi|254428030|ref|ZP_05041737.1| amino acid or sugar ABC transport system, permease protein [Alcanivorax sp. DG881] gi|196194199|gb|EDX89158.1| amino acid or sugar ABC transport system, permease protein [Alcanivorax sp. DG881] Length = 551 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 93/297 (31%), Gaps = 21/297 (7%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S + ++ + +G Sbjct: 275 AAIGLAITFGVMGVINMAHGELIMLGAYTTYVVQQLLPSSHEWSLLIAVPAAFLVSAFVG 334 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + +F +L L + +L + + + V + Sbjct: 335 VLIERFVIRFLYGRPL------ETLLATFGVSLILQQAVRVIFSPLNRTVITPEWMSGAL 388 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + Y++ + +++ L++T + R + N+ L Sbjct: 389 EINPVFSLTYNRLYIIFFALAVFLALLTLLKKTRLGLQVRAVSQNRATARGLGIRSERVN 448 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A + S I +V+ GG+ +L A L Sbjct: 449 ALTFGLGSGIAGVAGVALAQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLWGTLTAAFSL 506 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +L M ++++ + L I + L R + Sbjct: 507 GIANKLLEPMAGAVLAK-------------IVVLVFIILFIQRKPRGLFPQRGRAAE 550 >gi|134300765|ref|YP_001114261.1| inner-membrane translocator [Desulfotomaculum reducens MI-1] gi|134053465|gb|ABO51436.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Desulfotomaculum reducens MI-1] Length = 356 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 118/335 (35%), Gaps = 7/335 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 K + L ++ + L+ G + + I+V+ +++V+G G+ SL Sbjct: 5 RMKPVLTLGLILLCSIALYFGQNYLDSFKIRVLNLAAIFVILGVSMNLVLGFTGMFSLGH 64 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +GAY IL +I I I + A Sbjct: 65 AGFMCVGAYVSAILTMSPESK--EMIYFMEPIISPLDKIHWPVFPAIIMAGIVAAFFGFL 122 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F + ++ + G ++ I I +V G Sbjct: 123 IGFPALRLRDDYLAIATLGF----GEIIRIIVTNTITITNGSLGLKNIPSIKSLWVYWGF 178 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + I+ L ++ A++ IRDN+ A ++ I KL +F+V + F G+AGA Sbjct: 179 AIATIWILKRLINSSWGYAFKAIRDNEIAAEAMGIDIFKHKLLSFSVGAFFAGVAGALMG 238 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + P MF+F ++ I++LGG+ SL+ A ++ ++E+ + L Sbjct: 239 HLITSVDPTMFRFLFTFQILLIIVLGGLGSLTGSVIAGVVVTIMMEVLRFVEQPMNFLGL 298 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + L LVIL L+ R Sbjct: 299 AIP-GIPGMRMVIFSLLLLLVILYYRQGLMGTREF 332 >gi|157415273|ref|YP_001482529.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|157386237|gb|ABV52552.1| branched-chain amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747915|gb|ADN91185.1| High affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni M1] Length = 349 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 135/355 (38%), Gaps = 47/355 (13%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + ++F+F+ Y ++ QI I+++ A +++ G G SL AIG Sbjct: 9 LIFLIASIVFIFVSPYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 68 Query: 78 AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 AY+ + + + + S L + V+ + S +I+ + Sbjct: 69 AYAAALVLLSADAKNDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRV 128 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL I + I + ITNG G+ + Sbjct: 129 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 168 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 Y G+ ++ +IL + + A + IRD++ A ++ + K AF+ Sbjct: 169 -----TIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFST 223 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+ G+ G A +SP F F ++ I++LGG+ S + ++IG E Sbjct: 224 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEW 283 Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ SL S + I L LV+L ++ S+ + Sbjct: 284 LRFLDELNIKIDSLNLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 338 >gi|91780165|ref|YP_555372.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692825|gb|ABE36022.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia xenovorans LB400] Length = 607 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 77/324 (23%), Positives = 129/324 (39%), Gaps = 29/324 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ ++ L Y+ IY + A L++V G++G +SL IGA Sbjct: 312 VLIAAVVSAFALPLIAPSPYLLQTLTNGWIYGLLALSLTLVAGTVGQISLGHAALLLIGA 371 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y +L G S + IP++ I+ G ++ PS + RG Y++IATL + EI +++ Sbjct: 372 YGSALLSVNLGWSPAVTIPLAGAITALIGTLLVYPSFRLRGHYVSIATLGIGEIVGLVVL 431 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI L G V S +Y+ L + + A + Sbjct: 432 NWDSLTRGPVGITGIPPLALFGWQVTSAR--------------AVYWFALAVLVVLALLQ 477 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L R+ + WR IR++ A + K AFA G+ G A I+ Sbjct: 478 VRLLRSHLGRTWRAIREDDVAARAYGVRPNRYKAIAFACGGFAAGIGGGIAAHLYSYINY 537 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F +I+ +++VILGG+ S++ LI + EL Y Sbjct: 538 QTFDSQVSILALTMVILGGLGSVAGAVVGAVALISLPELFRFAADY-------------- 583 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + L L++ R L Sbjct: 584 -RMLIYGVVLLLLVRFRPQGLFGT 606 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 102/309 (33%), Gaps = 25/309 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +G + + +R GL + + + Sbjct: 6 DYTINGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGGFIGWLCLTRLGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GM++ L+ IA L+ + +L + I G Sbjct: 66 LATVAGCALLGMLIERIGLRPLQGAARIAPLLATIGISFVLDQLAQIVFGPDPRP----- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 V S + + F + +A + ++LR T + A R + Sbjct: 121 ------VPSTLPEWSFTIGGATLGSLDLLIAATGIGAAAVLYVFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVNVHAVNRAVFAIACGLGGLSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFVLLLLFLV-------------WRP 280 Query: 337 HSLLRLRTP 345 + L Sbjct: 281 NGLFSANRR 289 >gi|225548146|ref|ZP_03769431.1| hypothetical protein RUMHYD_00125 [Blautia hydrogenotrophica DSM 10507] gi|225040677|gb|EEG50923.1| hypothetical protein RUMHYD_00125 [Blautia hydrogenotrophica DSM 10507] Length = 342 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 118/338 (34%), Gaps = 28/338 (8%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R+ + K L+ + LL+ + Y+ + + + ++ L++V G GL Sbjct: 3 RVKGWMKREYLIFIGLYLLVLILNYTGVINNYLLQVIMLAGVNIIVTLSLNLVNGVTGLF 62 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S+ A+GAY ++ + ++S + L Sbjct: 63 SIGHAGFMAVGAYVAAVIST-------------TLMSALEISSKDFLANGILLLALIGGG 109 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L+ + I + I + + +R + I +I + Sbjct: 110 LVAAGGGFLIARPTLKVKGDYLAIVTLGFGEIIRSVIRLIDYVGGARGMIGIPKITNFTW 169 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + L+ ++ + IR+N+ A ++ T K AF S+ + G+ G Sbjct: 170 VFLVVLLAVYSSRNFIKSTYGRSCLAIRENEIAAEAMGTDARKYKTIAFTFSAFWAGIGG 229 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA ISPD F +S++ ++ + GG+ +++ A ++ + EL ++ Sbjct: 230 GLFAHLLMFISPDTFAYSKSTDLLVYLYAGGVGTITGAAAGAFLMTLLPELLRFLDD--- 286 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + L VI+ R + + R Sbjct: 287 ------------WRLVIYALVLLYVIIWRPYGISGGRE 312 >gi|323498861|ref|ZP_08103844.1| urea ABC transporter, permease protein UrtB [Vibrio sinaloensis DSM 21326] gi|323315973|gb|EGA69001.1| urea ABC transporter, permease protein UrtB [Vibrio sinaloensis DSM 21326] Length = 541 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 99/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ GL+I G +G++++ +GAY+ ++ + + +S + Sbjct: 256 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMLGAYTTYVMQQLLPAHTGVALILSIPM 315 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G+ + +L L + +L + + + + Sbjct: 316 AFLVSGLVGILIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 369 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + Y++L + ++++ L++T + R + N+ + Sbjct: 370 TPDWMAGALEINPMLSLTYNRLYIILFCAMVFMALVMILKKTPLGLQVRAVSQNRPMARA 429 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + + G+AG + + + I +V+ GG+ +L Sbjct: 430 MGIRSERVDAMTFGLGAGVAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 487 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L ++ L+++ + L I R L Sbjct: 488 GTLVAGLGLGLFNKILEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 534 Query: 343 RTPSNF 348 R + Sbjct: 535 RGRAAE 540 >gi|297530318|ref|YP_003671593.1| inner-membrane translocator [Geobacillus sp. C56-T3] gi|297253570|gb|ADI27016.1| inner-membrane translocator [Geobacillus sp. C56-T3] Length = 328 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 132/324 (40%), Gaps = 29/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + +L L + ++ +ILI +FA L+++V GL+SL + IG Sbjct: 5 MFISAAAILLLAAAPFLFSLFYLNLLAEILILAIFALSLNVLVAYTGLVSLGHAAFFGIG 64 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L + + + S +I+ I+GL ++ G Y + TL S++ + + Sbjct: 65 AYASALLSKEWSPQFLVTMLASFLIAAIAAAIIGLFCVRVNGFYFLMLTLAFSQMIYSFV 124 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + +T G G+ F + +F+YYV+L + + + Sbjct: 125 HQSTTLTGGSNGLSGLPSPVFGTLDLSH--------------PVFLYYVILFVFIVMYIV 170 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + ++ + IR+N+ ++ K +AF ++ A G++GA ++ +S Sbjct: 171 LSLMVKSPFGHVLIGIRENEMRMKAIGYNTTLYKYAAFIIAGAIGGVSGALYSTFNGFVS 230 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ ++ + V+ +V++GG ++ A ++ + + Sbjct: 231 PNDVYWTMSGSVLIMVLIGGAGTMIGPVLGAAFIVVLETIVSSY---------------T 275 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 T ++ + L ++ ++ Sbjct: 276 TMWTLIIGVIFILFVVFIPQGIVG 299 >gi|83747811|ref|ZP_00944845.1| LivG [Ralstonia solanacearum UW551] gi|83725583|gb|EAP72727.1| LivG [Ralstonia solanacearum UW551] Length = 608 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 113/299 (37%), Gaps = 15/299 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V +++ L + ++ ++ I +Y + A GL ++ G GL S +G Sbjct: 22 LLTVAFVIVLALLPVLPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS L ++YGLS W+ + I+ A ++GL +++ G YL +AT+ + Sbjct: 82 AYSTAYLTTQYGLSPWIGLLAGLAITMASAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + I + M+Y++ + ++ Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNLLGKPLQSGREMFYLIWAVVVVAVLA 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + A R ++ ++ + K+ F ++ ++G +A + ++ Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVAAAILACISGFLYAHLQRAVN 246 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P F + I + + ++GG+ + +L + + + S F+ Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQSLLPKLLGSTGNFEIIV 305 >gi|46201433|ref|ZP_00208100.1| COG4177: ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 363 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 117/320 (36%), Gaps = 26/320 (8%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 ++ L + ++ I+I + A L ++VG GL+SL + +G Y I Sbjct: 19 FPVWGPLAFSAKYAFLLQKLTGIMILAILAMSLDLLVGVAGLVSLGHAAFFGLGGYMLAI 78 Query: 84 LGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 L +Y ++W+ +P + + A ++G +++ G Y + TL ++ Sbjct: 79 LSPQYEAANVWVALPATMAVVAAASAVVGFLAIRTAGIYFIMVTLAFGQMGYYFF-NDSK 137 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + G G Y+ + + F + + ++ +LG +++ + Sbjct: 138 LAGGSDGAYIYVKPS---------VEAFGLTLINLENKQAFFFTVLGALVAVYALLRVVL 188 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + I N+ L KL AF ++ A G+AG A +SP M Sbjct: 189 ASPFGRVLAAIGVNEGRVRGLGFNPTAYKLVAFTIAGALAGLAGFLAATQYGFVSPAMLG 248 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + ++ V+ +VILGGM +L IL + ++ Sbjct: 249 WHQSGHVLVMVILGGMGTLFGPVLGAFILELAHFGLEAVTEHW---------------LL 293 Query: 323 LMVIALFLVILMRSHSLLRL 342 M + ++L + L Sbjct: 294 PMGALVIAIVLALPKGVAGL 313 >gi|170745143|ref|YP_001766600.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] gi|170658744|gb|ACB27798.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] Length = 342 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 112/320 (35%), Gaps = 25/320 (7%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L FL ++ + IL+ ++A G +++ G GLLS GAY Sbjct: 38 VALTLAFLVVFPWIAPYQALAVNILVLGLYALGFNLLFGYTGLLSFGHAAFLGGGAYGCG 97 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 I RYGL L + +++ MG+ +++ RG Y A+ TL +S + + Sbjct: 98 IAIVRYGLHPVLGLAAGTLLATGIAAAMGVLAIRTRGIYFAMTTLALSMCVYYAFYQAEA 157 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 T G+ G+ + ++ + YY L + ++ + L Sbjct: 158 FTGGENGLRGINVPALALPGFS----------LNLLDPVVKYYAALAVVGVAVWLFSRLL 207 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + A IR+N+ + + KL AF +S A G+AG A + + Sbjct: 208 SSPFGAALEAIRENEGRAQACGYDVRRMKLVAFVISGALCGLAGGLQAIHLSIVPIETMH 267 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 +S + + + +LGGM + A + + + ++ Sbjct: 268 YSTSGQAVMMALLGGMGTFFGPFVGAATYALLQDGLATVTSHW---------------QL 312 Query: 323 LMVIALFLVILMRSHSLLRL 342 + +L + Sbjct: 313 FVGAIFIAFVLFLPLGIWGE 332 >gi|23466261|ref|NP_696864.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium longum NCC2705] gi|23327009|gb|AAN25500.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium longum NCC2705] Length = 358 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + ++ + + YI + + I ++ L++ +G LG L+L C A Sbjct: 12 FIGILAAFGIVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 71 Query: 76 IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 IGAY + L + +++ G+++G+P+L+ GDYLAI T Sbjct: 72 IGAYVAALTSKYMVAAGIAIDPTARFLLTTLIGGVVACVFGILIGIPALRLHGDYLAIIT 131 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ K L + + I YV Sbjct: 132 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIERTANLYV 173 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++ ++ R+ A + IRD++ A + + K+ FA+S+ F G+AG Sbjct: 174 VFWIMVVTVVVLFMFGRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 233 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA ++P M + +I + +V+ GGM SL+ + L + EL Y Sbjct: 234 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 291 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L LV++ R + S Sbjct: 292 -------------RMLAYSVVLVLVMIFRPQGIFGSWEFSL 319 >gi|163850715|ref|YP_001638758.1| inner-membrane translocator [Methylobacterium extorquens PA1] gi|218529437|ref|YP_002420253.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4] gi|254560340|ref|YP_003067435.1| ABC transporter permease [Methylobacterium extorquens DM4] gi|163662320|gb|ABY29687.1| inner-membrane translocator [Methylobacterium extorquens PA1] gi|218521740|gb|ACK82325.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4] gi|254267618|emb|CAX23464.1| ABC transporter, permease [Methylobacterium extorquens DM4] Length = 337 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 114/302 (37%), Gaps = 25/302 (8%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ + +LIY ++A G +++ G GLLS + GAY I +GL L + ++ Sbjct: 49 ALAVNVLIYGLYAVGYNLLYGYTGLLSFGHAAFFGTGAYLTGIGIGAFGLHPLLAMALAV 108 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + + +++G S++ RG Y A+ TL ++++ + ++ T G+ G Sbjct: 109 VAASGLALVIGTVSIRSRGIYFAMVTLALAQLVYYVALQASSWTGGENG----------L 158 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 S ++ + Y +L + ++I + + IR+N+ Sbjct: 159 RGFTVSAIDLGIVSLDILNPLTKYLFVLAFVGAALALISRILASPFGAVIEAIRENETRA 218 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + KL AF +S F G+AGA A + D + + + + ++GG + Sbjct: 219 RACGFDVERTKLLAFVLSGLFCGLAGALSAIHLSIVPLDSLAYHTSGTAVVMTLVGGAGT 278 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 ++ + ++ ++ + L +L L Sbjct: 279 FFGPFVGALTVLVLEDVLSLWTPHW---------------QLALGSVFILFVLFLPRGLW 323 Query: 341 RL 342 Sbjct: 324 GT 325 >gi|171741642|ref|ZP_02917449.1| hypothetical protein BIFDEN_00728 [Bifidobacterium dentium ATCC 27678] gi|171277256|gb|EDT44917.1| hypothetical protein BIFDEN_00728 [Bifidobacterium dentium ATCC 27678] Length = 443 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 97/305 (31%), Gaps = 28/305 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I L+ + + G+++V G+ GL S + +G + + + + +I Sbjct: 163 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAYVGTQMLHMPVVASAIFAIVI 222 Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 G+I R + +I++ L G + Sbjct: 223 GAITGLIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 275 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 F + ++ L + + L+L +T + A R + DN Sbjct: 276 -----KSVPDSFQLGPITTDMPTLLSALIAICVIIGVTLFLYKTRLGRATRAVSDNAALA 330 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + + +S + ++G + IS + + +++ + V LGG+ + Sbjct: 331 AASGINVDQVVRVVWILSCSMAALSGVLLGIYLNGISWNT-GATLILLMFAAVTLGGLGT 389 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + ++ V ++ + N + L +V+L+R + Sbjct: 390 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 436 Query: 341 RLRTP 345 + Sbjct: 437 GKQQR 441 >gi|86747820|ref|YP_484316.1| inner-membrane translocator, ABC transporter related [Rhodopseudomonas palustris HaA2] gi|86570848|gb|ABD05405.1| inner-membrane translocator, ABC transporter related [Rhodopseudomonas palustris HaA2] Length = 583 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 113/321 (35%), Gaps = 23/321 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + ++ L + + + + + GL ++ G +GL S AY Sbjct: 4 LSIAVIGLLCIVPIAFPTSYLTPLNYVGLNAIICVGLVLLAGVVGLASFGQAAFVGTSAY 63 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L ++ G S W +P + +++ + + +++ G YL + TL + Sbjct: 64 TAALLSTKLGWSAWETLPAALLVTATSALGLSWLTIRLSGHYLVLGTLAWGTALYYLFGN 123 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + G GI + G + +Y+++ ++ + Sbjct: 124 VAFL-GGYNGISGIHPVTLFGISFGDTR--------------AVYWLIWACVAIAMMLTA 168 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + A R +R A S + K AF +++ F G+ G A ++P Sbjct: 169 NLLDSRTGRALRVVRHTIMAA-SFGIDVSKLKTKAFVLAAVFAGVTGWLTAHYLGVVNPG 227 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F + +I + +V++GG + L+ A++ + F+ S Sbjct: 228 PFNANSSIDYMFMVVVGGSSHLAGALVGPAVVEFLRNWLRETLPNLIGGSSSFELS---- 283 Query: 320 HTTLMVIALFLVILMRSHSLL 340 + + + L++ ++ Sbjct: 284 ---VFGLMMVLLLQGAGGGIM 301 >gi|284992220|ref|YP_003410774.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160] gi|284065465|gb|ADB76403.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160] Length = 415 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 73/341 (21%), Positives = 138/341 (40%), Gaps = 15/341 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ LL FL + ++ G + + A GL+++VG+ G LSL A+GA Sbjct: 35 VLIAALLGFLLVFPLYFDEFWLRTGFAVFGAAIGAIGLNLLVGTTGQLSLAHAFFLAVGA 94 Query: 79 YSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 SY + GL + + V +++G G++ + + RG YL +A+ Sbjct: 95 VSYSYISGESGGLGTRAGIEGLGLPPVVGMVVGVLLAGLAGLVFSPIAARLRGIYLGVAS 154 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L + I +++ W P+T G G A G T + ++Y+ Sbjct: 155 LGLVFIGVHVINTWTPVTGGFNG-RAAPEFSLFGFTFGNSDPQLWVLGVPFREAERLWYL 213 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 L + + L R+ A +T+RD++ A + + K F VSS + G++G Sbjct: 214 GLVLALAAYVFARNLLRSRPGRALQTLRDSEVAASVMGVNVQAYKARVFLVSSMYAGLSG 273 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--Y 304 +A S I+P+ F +I +++++LGG+ S+ A + + L Sbjct: 274 VLYALSIGSIAPESFTLVVSIQYLAMIVLGGLGSVGGAALGALFVTALPLLFQQYADVLP 333 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++ + S L A+ L++L L + Sbjct: 334 LVSAPGQGGISAGFAARFLYGAAIILIVLFEPAGLAGIAQR 374 >gi|207724434|ref|YP_002254831.1| amino-acid composite atp-binding transmembrane protein [Ralstonia solanacearum MolK2] gi|206589655|emb|CAQ36616.1| amino-acid composite atp-binding transmembrane protein [Ralstonia solanacearum MolK2] Length = 608 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 114/299 (38%), Gaps = 15/299 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V +++ L + ++ ++ I +Y + A GL ++ G GL S +G Sbjct: 22 LLTVAFVIVLALLPVLPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS + ++YGLS W+ + I+ A ++GL +++ G YL +AT+ + Sbjct: 82 AYSTAYVTTQYGLSPWIGLLAGLAITMASAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + I + M+Y++ + ++ Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNLLGKPLQSGREMFYLIWAVVVVAVLA 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + A R ++ ++ + K+ F V++ ++G +A + ++ Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVVAAILACISGFLYAHLQRAVN 246 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P F + I + + ++GG+ + +L + + + S F+ Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQSLLPKLLGSTGNFEIIV 305 >gi|315932145|gb|EFV11088.1| branched-chain amino acid transport system / permease component family protein [Campylobacter jejuni subsp. jejuni 327] Length = 349 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 135/355 (38%), Gaps = 47/355 (13%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + ++F+F+ Y ++ QI I+++ A +++ G G SL AIG Sbjct: 9 LIFLIASIVFIFVSPYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 68 Query: 78 AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 AY+ + + + + S L + V+ + S +I+ + Sbjct: 69 AYAAALVLLSADAKNDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRV 128 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL I + I + ITNG G+ + Sbjct: 129 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 168 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 Y G+ ++ +IL + + A + IRD++ A ++ + K AF+ Sbjct: 169 -----TIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFST 223 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+ G+ G A +SP F F ++ I++LGG+ S + ++IG E Sbjct: 224 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEW 283 Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ SL S + I L LV+L ++ S+ + Sbjct: 284 LRFLDELNIKIDSLNLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 338 >gi|192292915|ref|YP_001993520.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192286664|gb|ACF03045.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 314 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 136/325 (41%), Gaps = 30/325 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ ++ L Y + + + + A GL+I++G G +SL + IG Sbjct: 10 VILIALAVVMAVLPLLFPSSYYFRVASLVWVSALAAIGLNILMGKAGQVSLGHAGFFGIG 69 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ I + GL+ L + V A++S ++G P L+ +G YLAIATL + + ++ Sbjct: 70 AYAVAIGPAHLGLNALLAVLVGALLSALLAFLVGRPILRLKGHYLAIATLGLGVLVAMVI 129 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 T G G+ V F S Y++ G+ + Sbjct: 130 TTESGWTGGPDGMPVPKLSLFGWRISGSNTW---------------YWITAGLLLIGTWF 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L T A+R + D++ A + + KL AF +++ + +AG+ A ++ Sbjct: 175 ALNLDDTPTGRAFRALHDSEIAARTAGVHVERFKLQAFVIAAVYASIAGSALAMMNGFVN 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD F ++ ++++V+LGG+ S+ A+L+ + +L Y Sbjct: 235 PDQAGFLHSVELVTMVVLGGLGSIVGSIVGAAVLVVLPQLLTVFQDY------------- 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 L+ + + + ++ ++ + Sbjct: 282 --EHFLLSLIIIVSMIFMRDGMVPM 304 >gi|13475974|ref|NP_107544.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14026734|dbj|BAB53330.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 327 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 134/323 (41%), Gaps = 23/323 (7%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------YG 89 Y LI+ + GL++ G GL ++ AIGAY+ +L + +G Sbjct: 7 YGAFFLTTALIFSLVTLGLNLQWGLTGLFNVGLAGFVAIGAYTSALLTTPDDAARLGGFG 66 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L I + + ++ G + G+ +L+ R DYLAI T ++ + Q + + + +T G G Sbjct: 67 LPILVGWLGAMVVGGIAAALTGMATLRLRSDYLAITTFGVAVVVQLVALNAQKLTGGPFG 126 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 I R F + +++ + V+ + ++ + L R+ Sbjct: 127 IGFIPRP------------FGSLAETPLLFNLSNLAVVCAVTLIAYLALEHLSRSPWGRV 174 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + +R++++A SL + F ++ AFAV A + +AGA A I+PD + V Sbjct: 175 LKALREDERAAISLGKSARFYRVQAFAVGGAIMALAGALQAHFTGFIAPDNYLPILTFQV 234 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++I+GG S + ++ G+ + F + + + L Sbjct: 235 WVMLIVGGSGSNFGAVIGSILVWGIWAGSGTLTSVLFAPEQQ--ARAASLQIVAIGVMLC 292 Query: 330 LVILMRSHSLLRLR-TPSNFLER 351 +++L+R + L R F +R Sbjct: 293 VILLIRPNGLFGDRPRRPRFGKR 315 >gi|171911822|ref|ZP_02927292.1| inner-membrane translocator [Verrucomicrobium spinosum DSM 4136] Length = 584 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 109/334 (32%), Gaps = 53/334 (15%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----------------- 85 I ++ A GL+I G +G++++ +GAY+ ++ Sbjct: 275 LSTGSILLVVAIGLAITFGLMGVINMAHGELLVVGAYTTYVVQCIFGAGLTLAPFSQSSL 334 Query: 86 -----------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + + + +P S +++ G+ + ++F + L+ + Sbjct: 335 TFTIPGMHATGATFSVYFLVALPCSFLMAALVGIGLERGIIRFLYKRPLES-LLATWGVS 393 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ + + G + + + G+ V + I F + + + + + + Sbjct: 394 IVMQQLLRLIFGPQNVALESPAWLSGSWVVNDIAFNWNRLFVIGFAVIIIVLTWAVL--- 450 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +T + R++ N+ + + F S G+AGAF + + Sbjct: 451 -------NKTPLGLLIRSVMQNRDMAACMGVRTERVNMLTFGFGSGLAGLAGAFISQIDN 503 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + V++GG+ ++ + + V + + Sbjct: 504 VGPYTGQNYI--VDSFMTVVVGGVGNMIGTVISALGIGVVDQSLQQI------------L 549 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L++ + L + R + R+ S Sbjct: 550 GNPVLGKILVLGTIILFLQWRPQGIFVTRSRSLE 583 >gi|91779097|ref|YP_554305.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691757|gb|ABE34955.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 328 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 77/308 (25%), Positives = 129/308 (41%), Gaps = 31/308 (10%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y+ + I++Y + A L+IV+G LG L+ + IGAY+ + GL Sbjct: 32 FVNDYVQFIVNTIVVYCIVAVALNIVLGYLGQLAFANAAFFGIGAYTAGLSMVHLGLPFV 91 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +P++ + G G+++GLP+L+ RG YLAI TL E+ + + I + +T G G V Sbjct: 92 VAVPLAGIAGGLAGLLVGLPALRVRGYYLAIVTLAFVELMRWVWIHAEKVTFGSGGFDVP 151 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + YYV L + L R+ A+ + Sbjct: 152 P----------------ISLFGMTLGGRGKYYVFLFVTVAVLWTTSLLLRSRYGRAFVAV 195 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 RDN+ A SL + K+ AFA S G+AGA FA R+SPD F S+ ++ +IV Sbjct: 196 RDNEAAAASLGIEVNRTKIIAFAWSGLVAGLAGALFAELNGRLSPDSFDISQMLMEFTIV 255 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++GG SL+ I+ + + + + + L V+ Sbjct: 256 MIGGPGSLAGSVIGAIIITALPNVLSNL---------------PGLNEVAFSVLLIAVLF 300 Query: 334 MRSHSLLR 341 + + Sbjct: 301 LIPKGIGG 308 >gi|227823939|ref|YP_002827912.1| putative branched-chain amino acid transport system / permease component [Sinorhizobium fredii NGR234] gi|227342941|gb|ACP27159.1| putative branched-chain amino acid transport system / permease component [Sinorhizobium fredii NGR234] Length = 328 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 70/322 (21%), Positives = 129/322 (40%), Gaps = 25/322 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + L++ +Y+ I LI+++ A GL+++VG GLLSL + IGAY Sbjct: 19 LAAILVVVALAAPFIGSRYVTHSLIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAY 78 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L YG ++ + +++GAC + +G+P+L+ R + TL I Q I Sbjct: 79 AAGLLAVHYGTPFYVNAAAAGLLAGACALPLGIPALRLRATSFVMCTLGFVIIGQAIAKN 138 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T G G+ + S V YY+ L + L+ + Sbjct: 139 WISVTRGDMGLSAIPKP----------HFALGPLSFTVSGTTSFYYMALAIGALATLAVW 188 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + R+ IR+N+ SL KL F +S+AF G+ G+ +A +SP Sbjct: 189 MIVRSPAGRNMIAIRENETLAESLGVPTWRYKLLVFIISAAFAGVGGSLYAHYLTVVSPL 248 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F+ + ++ IV+ GG ++S + + + +G+ E Sbjct: 249 TFQMYYSTTMLIIVLGGGAGTISGVVFGSLLFVGLTEALR---------------ITPEL 293 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 + L +++ Sbjct: 294 RMIAYGLCLLVLVFWFKKGFAP 315 >gi|254473749|ref|ZP_05087144.1| permease protein, haat family [Pseudovibrio sp. JE062] gi|211957135|gb|EEA92340.1| permease protein, haat family [Pseudovibrio sp. JE062] Length = 326 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 127/315 (40%), Gaps = 26/315 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88 Y M I I IY + A GL+I G GL + +A+GAY+ +L + + Sbjct: 8 NYAVFMAIFIGIYSLLALGLNIQWGFSGLFNAGIAGFFAVGAYTSALLTAPESSVHLGGF 67 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L + + + + +GA +G L+FR DYLAIAT+ ++EI + ++ +T G Sbjct: 68 QLPVVIGWIGAMIAAGAIAWPIGKVCLRFRSDYLAIATIGVAEIIRLVVKSEGWMTGGAR 127 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ R + S++ ++ ++L + + I Sbjct: 128 GVNKIPRPF--------------GDLSYLYSQLAYLALVLAIVAVVYWAIERQISAPWGR 173 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENI 267 R IRDN+ A ++ I +L AF +A +G+ GA FA I+P+ Sbjct: 174 MMRGIRDNEDAATAMGKDIKARRLEAFIFGAAVMGLGGALFAHFNRSITPEAIDPMIATF 233 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ ++ILGG + A++ + + ++ ++ + Sbjct: 234 LIWIMLILGGSGNNRGALLGVAVVWIIWSASEFVTD---QLPTEYAIKAKYMRVFIIGLL 290 Query: 328 LFLVILMRSHSLLRL 342 L LV+ R +L Sbjct: 291 LQLVLRFRPEGILPE 305 >gi|57242112|ref|ZP_00370052.1| branched chain amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] gi|57017304|gb|EAL54085.1| branched chain amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] Length = 350 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 118/335 (35%), Gaps = 7/335 (2%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++ L F+F+ Y S+ QI I+++ A +++ G G SL A+G Sbjct: 10 LIFLFLALAFIFISPKIFSDYGMSIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAVG 69 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY ++ + + + L L F Sbjct: 70 AYVAALVLLSAEAKEEQFFYDG-INPFILALHFPSFIVALLAAGLCACLLSFILSFAVFR 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 ++ + G + +L L + I Y G+ ++ + Sbjct: 129 VRGDYLAIVTLGFGIIIKLLALSFPTFTN----GSRGINEIPAYSNIYWTGGIAIIAVML 184 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 IL + + A + IRD++ A ++ + K AF S+ G+ G A +S Sbjct: 185 ILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFGTSAFLEGVGGGLLACLLTTVS 244 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL--KFDCS 315 P+ F F ++ I++LGG+ S + + ++IG E ++ + L + Sbjct: 245 PEQFDFLLTFQLLIIIVLGGLGSTTGAILGSILVIGGAEWLRFLDEFKIQMDLFGAEIQT 304 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + L LV+L ++ + + Sbjct: 305 GHGLRMVVFSLILILVMLFARRGIMGDKELVEIFK 339 >gi|76803454|ref|YP_327723.1| branched-chain/neutral amino acids ABC transporter permease [Natronomonas pharaonis DSM 2160] gi|76559269|emb|CAI50877.1| ABC-type transport system permease protein II (probable substrates branched-chain/neutral amino acids) 2 [Natronomonas pharaonis DSM 2160] Length = 353 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 127/327 (38%), Gaps = 26/327 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + + + +L+++ A +++ G G L + IG Sbjct: 27 IVWIPIVAFLFVVPWIGVGNFELRILVGVLMWIGLAQSWNMIGGYAGYLDFGHGAYFGIG 86 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 A++ I S Y L + ++ ++ +G+P+L+ +G Y AIAT +E + + Sbjct: 87 AFATGIAMSVYALPFLPALVLAGVVGAVFAYFIGVPTLRLKGAYFAIATWAFAEAMRQLA 146 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + IT G +G T+ S + F P + I++YYV+ G+C + Sbjct: 147 L-LLDITGGTSG-----------LTLPSTMDAFGIPLPDIPRIIYIYYVMFGLCVGIMLL 194 Query: 198 IL-WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 R + +RDN+ A SL K + +S A + G +A + Sbjct: 195 TYVLFERHEFGYKVKAVRDNEDAAESLGIDSTRIKRQVYVLSCATAALLGGAYAFYITFV 254 Query: 257 S-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++ ++ + ++GG+ ++ ++ + L Sbjct: 255 HPQEVLDSMITAQMVIMALVGGIGTVLGPVVGGTLIFLLDRLSALF------------FG 302 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + + +LM + + +VIL + ++ L Sbjct: 303 SDTLYISLMGLLIMIVILFAPNGIVGL 329 >gi|300693614|ref|YP_003749587.1| ABC transporter, permease protein (n-ter) and ATP-binding protein (c-ter) [Ralstonia solanacearum PSI07] gi|299075651|emb|CBJ34948.1| ABC transporter, permease protein (N-ter) and ATP-binding protein (C-ter) [Ralstonia solanacearum PSI07] Length = 608 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 111/299 (37%), Gaps = 15/299 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L +++ L + ++ ++ I +Y + A GL ++ G GL S +G Sbjct: 22 LLTAAFVIVLALLPVLPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS L ++YGLS WL + I+ ++GL +++ G YL +AT+ + Sbjct: 82 AYSTAYLTTQYGLSPWLGLLAGLAITMVSAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + I + M+Y++ + ++ Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNLLGKPLQTGREMFYLIWAVVVVAVLA 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + A R ++ ++ + K+ F ++ ++G +A + ++ Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVAAAILACISGFLYAHLQRAVN 246 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P F + I + + ++GG+ + +L + + + S F+ Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQSLLPKLLGSTGNFEIIV 305 >gi|323529385|ref|YP_004231537.1| inner-membrane translocator [Burkholderia sp. CCGE1001] gi|323386387|gb|ADX58477.1| inner-membrane translocator [Burkholderia sp. CCGE1001] Length = 356 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 122/327 (37%), Gaps = 27/327 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ LL+ L AT S+ ++L++ + A G ++++G GLLS I + +G+ Sbjct: 30 FLLLALLVVCILPATLRSG---SLATEVLVFALAALGCNLLLGHTGLLSFGQGIFFGLGS 86 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 YS ++ ++ L + + + + + +G S++ RG Y + TL ++F + Sbjct: 87 YSAGLVLTKAALPVPVALLAAIAVGAVAAAFVGWFSIRQRGTYFVMLTLAFGQLFYFLAY 146 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G G+ R + F + Y + + + ++ Sbjct: 147 TTPDLTGGDNGLLDIPRPA---------LGLFGKELIVLTSPWQYYGFVAVLFLVVFWLL 197 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + + IRDN+ ++ + KL AF +S G+AGA A Sbjct: 198 MRVSHSVFGRTLLAIRDNEARAAAVGYDVKRFKLMAFVISGGVTGLAGALHALMTGIAPL 257 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + +++ + ++GG +L A + + + + Sbjct: 258 SNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRW------------- 304 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 L+ I L V L L L Sbjct: 305 --LLLLGIVLMAVSLYMQRGLWGLGER 329 >gi|224371920|ref|YP_002606086.1| LivM5 [Desulfobacterium autotrophicum HRM2] gi|223694639|gb|ACN17922.1| LivM5 [Desulfobacterium autotrophicum HRM2] Length = 290 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 68/309 (22%), Positives = 123/309 (39%), Gaps = 20/309 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + I I+IY +FA L++ +G GL + + +AIGAY+ +L L + Sbjct: 2 DYLYHILILIMIYSIFAISLNLELGFAGLYNFGHIAFFAIGAYTSALLSLGGMPIP-LAV 60 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + SG G I+ +L GDY IATL+ +E+ Q +L+ + IT G G+ R Sbjct: 61 VLALVASGVAGAILARFTLGLSGDYFGIATLVFAEMIQLLLLNERDITRGPMGLPGIPRP 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++G+ I+ V + L ++ + A + +R++ Sbjct: 121 AWMGSGHEG--------------LIWFLAVAVIGTVLVFFLVRRISNAPFGRALKVVRED 166 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L K A + S G AG +A ISP F +E I V+ V++G Sbjct: 167 EFVAQALGKNTFILKTKAMVMGSVLAGFAGVLWAHYITYISPSDFTLNETIFVLLCVVVG 226 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G + +++ E + +F + L ++L R Sbjct: 227 GKGTNVGPLVGAFVIVFFGEFVRFL-----PIPSEFSRFVAPLQGMVYGALLIFMMLKRP 281 Query: 337 HSLLRLRTP 345 L+ Sbjct: 282 QGLISESRR 290 >gi|295696246|ref|YP_003589484.1| inner-membrane translocator [Bacillus tusciae DSM 2912] gi|295411848|gb|ADG06340.1| inner-membrane translocator [Bacillus tusciae DSM 2912] Length = 346 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 117/291 (40%), Gaps = 14/291 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + + + + + + + +Y M GLS+++G GL+SL + IGAY Sbjct: 24 ALIAVVVAICPWIVGPFWTQIMLLTGLYAMCILGLSLLIGHAGLVSLAQAAFWGIGAYVS 83 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 L ++G L + ++G ++G + + G YL + TL I I ++ Sbjct: 84 AFLSLKHGFPTTLTLVAGLAVAGIVAFLLGWLTRRLAGHYLTLVTLGAGMIMNLIFVEES 143 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 T G +G+ L + S ++ YY++ G+ L +I L Sbjct: 144 QWTGGASGLSEIPHLSVGSWVIDSDLQM--------------YYLVWGILALLLVLIWNL 189 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + + RD+ A + + K+ AF S ++G +A ISP++F Sbjct: 190 LHSPWGHTLQATRDSSTAASATGVDVGRFKVQAFVASGVLAALSGGLYAHYMTFISPELF 249 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 F ++I+ + + ++GG S+ +L + E + + + + Sbjct: 250 SFKQSILFLLMAVVGGPLSIWGPIVGAMLLTVLTEALRSIMPMFGTNTVGP 300 >gi|294678946|ref|YP_003579561.1| branched-chain amino acid ABC transporter permease LivM [Rhodobacter capsulatus SB 1003] gi|294477766|gb|ADE87154.1| branched-chain amino acid ABC transporter, permease protein LivM-3 [Rhodobacter capsulatus SB 1003] Length = 358 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F +RL++ L + + + +++ + LIY + A GL+I+VG Sbjct: 20 FPIRLDRMGYFAALAT------AYCVVPFFIDDYWANAVFVPFLIYAIAAIGLNILVGYA 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + + I + + ++ I+ G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYAVYKLMTAFPEVPILIHVLLAGGITACVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + K N T F F + Sbjct: 134 AVATLAAQFFLVWLFNKVPWFYNYS---------ASGQITAPDRTMFGVFITGAQTTAAA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L + L A + L R I W IRD A + + AK++AFAVSS FI Sbjct: 185 KYLFCLVLLTLVALMARNLTRGTIGRKWMAIRDMDIAAEIIGVNPLSAKVTAFAVSSFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA + + + F +++ +V+ +VI+GG+ S+ A L+ + Sbjct: 245 GIAGALLFSVYLGAAEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVFLKN 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + L ++ + + +++ H L +L Sbjct: 305 V---LVGGLGWPTDVAAHLELMIVGALIVVFLIVEPHGLAQLWR 345 >gi|23335565|ref|ZP_00120800.1| COG4177: ABC-type branched-chain amino acid transport system, permease component [Bifidobacterium longum DJO10A] gi|189440755|ref|YP_001955836.1| branched-chain amino acid ABC transporter permease [Bifidobacterium longum DJO10A] gi|189429190|gb|ACD99338.1| ABC-type branched-chain amino acid transport system permease component [Bifidobacterium longum DJO10A] Length = 362 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + ++ + + YI + + I ++ L++ +G LG L+L C A Sbjct: 16 FIGILAAFGIVMALCESGLAGSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75 Query: 76 IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 IGAY + L + +++ G+++G+P+L+ GDYLAI T Sbjct: 76 IGAYVAALTSKYMVAAGIAIDPTARFLLTTLIGGVVACVFGILIGIPALRLHGDYLAIIT 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ K L + + I YV Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIERTANLYV 177 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++ ++ R+ A + IRD++ A + + K+ FA+S+ F G+AG Sbjct: 178 VFWIMVVTVVVLFMFGRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 237 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA ++P M + +I + +V+ GGM SL+ + L + EL Y Sbjct: 238 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 295 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L LV++ R + S Sbjct: 296 -------------RMLAYSVVLVLVMIFRPQGIFGSWEFSL 323 >gi|311105886|ref|YP_003978739.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310760575|gb|ADP16024.1| inner-membrane translocator 34 [Achromobacter xylosoxidans A8] Length = 606 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 104/312 (33%), Gaps = 18/312 (5%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R ++ +L L + L+ G Y+ ++ I+ L + + A + ++ G G L Sbjct: 20 RTSRSRSLLGLAGLC---LVLTAAGPWLFDTYMLNVLIKALFFAVAAVTVDVLWGYTGYL 76 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + + +GAY+ + + YG S + + GA ++ + + Sbjct: 77 TFGQSAFFGVGAYAAGLAFTHYGFSPAIAALAALAAVGAAALLALVTGWLSFYRGASPFF 136 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + I++ ++ G +F + Y + Sbjct: 137 ATVISLVLPIVLMQLVLSGGT---------------FTGSSSGLTGYETFDLSLEAWYVI 181 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 G + A + + R+ +RDN+ L +++ A G+AG Sbjct: 182 AAGGLSVVALLAWVVVRSDGGRILVALRDNEARCSYLGLNTAHWRIALLVACGAVAGLAG 241 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + A ++P++ F +I V LGG ++ ++ G + + Sbjct: 242 FGYGAFSGVVAPELTGFVFGTELIIWVALGGRGTIWGPVLGAILINVAGSYLSGNIPFVW 301 Query: 307 NSLLKFDCSFNM 318 LL + Sbjct: 302 QLLLGVTFVLVI 313 >gi|227485097|ref|ZP_03915413.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus lactolyticus ATCC 51172] gi|227236930|gb|EEI86945.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus lactolyticus ATCC 51172] Length = 324 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 80/348 (22%), Positives = 145/348 (41%), Gaps = 45/348 (12%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 S K I L +++ +++ +G +Y ++ I I I ++ + L++ VG L Sbjct: 1 MSTNKKKTYLITTALVILFFVIIQGLIGGGIINRYWQNILILICINIIMSTSLNLTVGVL 60 Query: 64 GLLSLNCVIAYAIGAYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G ++L AIGAY+ + L +L + ++ +++ G+++GLP L+ G Sbjct: 61 GQINLGHAGFMAIGAYAAALFLKSGLVGGFLGYFLSLIIAGVVATVFGILIGLPVLRLTG 120 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI + ++ T G G+ + G Sbjct: 121 DYLAIVTLAFGEIIRVLIENL-SFTGGAQGLAGIPTTHDFGK------------------ 161 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 Y+++ R A +IRDN+ A S I K AFA+S+ Sbjct: 162 ----YFLVAAFLVTMIFTYASCRH---GRAVLSIRDNELAAESCGINITKYKTFAFALSA 214 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 F G+AGA +A S ++ ++F ++++ + +V+LGGM S++ +T L + E+ Sbjct: 215 LFAGVAGALYAQSFGVLAANIFNYNKSFDYLVMVVLGGMGSMTGAIFSTIGLTILPEVLK 274 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 M + + L V++ R LL + S Sbjct: 275 PMAE---------------WRMVIYAVILIAVMIYRPQGLLGRKEFSL 307 >gi|330467490|ref|YP_004405233.1| inner-membrane translocator [Verrucosispora maris AB-18-032] gi|328810461|gb|AEB44633.1| inner-membrane translocator [Verrucosispora maris AB-18-032] Length = 368 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 123/310 (39%), Gaps = 19/310 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---- 91 Y + + Y+ GL+I+ G G LSL A GAY+ + S + Sbjct: 50 DSYRNFQLATVAAYLCATAGLTILTGLCGQLSLGHGALMATGAYTVALCQSAFFDRGVTS 109 Query: 92 ---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + L + + ++ G+++G+ + + RG YLA TL ++ + + + + + NG+ Sbjct: 110 GAVLLLSLVAAVAVTVTVGLVVGVAAARLRGPYLAGLTLAVAVVVPALTVTFDGLFNGEQ 169 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ V G + + ++ G L ++ L R+ Sbjct: 170 GLPVPVAPAPAGLGLYFPHERW------------QLWMAAGATLLCLVVLANLVRSRYGR 217 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 +R +RD++ A + ++ AF VS+A G+ GA A +SP F + ++ Sbjct: 218 LFRAVRDDEVAARLAGIHVARTQVIAFVVSAAGAGLGGALLAVLAQSVSPGAFGLNLSLF 277 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 ++ V++GG+ L+ +L+ + +L + + S + L Sbjct: 278 LLMAVVIGGLGRLAGAVWGAFLLVVLPDLTHSLTNLFTLSPATAQRLEGNLPLAIFGATL 337 Query: 329 FLVILMRSHS 338 +V++ Sbjct: 338 IVVMIAAPGG 347 >gi|327193241|gb|EGE60147.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 328 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 123/310 (39%), Gaps = 25/310 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y+ I LI+++ A GL+++VG GLLSL + IGAY+ +L YG Sbjct: 31 PFVASTYVVHALIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAYASGLLAVTYGTP 90 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 ++ + + + +GA + +G+P+L+ R + TL I Q I W +T G G+ Sbjct: 91 FYVNVAAAGLAAGAIALPLGIPALRLRSTSFVMCTLGFVIIGQAIAKNWILLTRGDMGLS 150 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + S V YY+ L + L+ + + R+ Sbjct: 151 SIPKP----------HFALGPLSFTVSGTTAFYYLALTVGILATLAVWMIVRSPAGRNMI 200 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IR+N+ S+ KL F +S+ F G+ G+ +A +SP F+ + ++ Sbjct: 201 AIRENETLAESVGIPTWRYKLIVFMLSAVFAGVGGSLYAHYLTVVSPLTFQMYYSTTMLI 260 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 IV+ GG ++S + + + +G+ E + L ++ Sbjct: 261 IVLGGGAGTISGVVFGSLLFVGLTEALR---------------VTPELRMIAYGLCLLVL 305 Query: 332 ILMRSHSLLR 341 + Sbjct: 306 VFWFRKGFAP 315 >gi|332799750|ref|YP_004461249.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp. Re1] gi|332697485|gb|AEE91942.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter sp. Re1] Length = 324 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 135/320 (42%), Gaps = 29/320 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 Y + Q LI ++ GL+ + G G ++L YA+GAYS +L + G+ Sbjct: 20 PVIDKNAYHHMLLNQTLINIIVVMGLNFITGLTGQMNLGTAGIYAMGAYSSALLSIKLGV 79 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S WL I + +I G +G PSL+ +G YL++ T+ SEI + IL W T G G+ Sbjct: 80 SAWLGIAFALLIGYIIGHALGYPSLRVKGVYLSLTTIGFSEIVRLILTNWANFTGGAQGL 139 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + G + + +YY+ L + L L + A+ Sbjct: 140 QNIPCISLFGFKFDNAFK--------------IYYLYLFITVLLCITAKRLVASKWGRAF 185 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 ++I+D+ +A + I K+ AF +++ + + GA +A I+P F +I + Sbjct: 186 KSIKDSAEAAEACGINIADIKIKAFTLATLYGCLGGAMYAHLIGYINPMGFTQDISINYL 245 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++++GG+ S+ + + EL + YY+ + + + Sbjct: 246 VMLMIGGIGSVEGNIIGAITVTILPELLRFLKDYYW---------------LIFSVITLI 290 Query: 331 VILMRSHSLLRLRTPSNFLE 350 ++ + ++ L P ++ Sbjct: 291 FAILLPNGIITLIKPLERVK 310 >gi|171057770|ref|YP_001790119.1| urea ABC transporter permease UrtB [Leptothrix cholodnii SP-6] gi|170775215|gb|ACB33354.1| urea ABC transporter, permease protein UrtB [Leptothrix cholodnii SP-6] Length = 528 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 99/310 (31%), Gaps = 17/310 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I ++ A GL+I G +G++++ IGAY+ ++ + + + L Sbjct: 235 LFTGISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATWLVQNLFRQHLPGLFDW 294 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + ++ + + +L W G+ Sbjct: 295 YIAFAIPASFLAAALVGAALER--SVIRWLYGRPLETLLATWGISLVLMQGVRSLFGAQN 352 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + S + + ++ + A + L + RT + R + N++ Sbjct: 353 VQVENPSWLSGGVVALDNLTLPYNRLAIIAFAFMVLAGVALLIARTRLGLFVRGVTQNRR 412 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + AF++ + G+AG A S+ S + +V+ GG+ Sbjct: 413 MAACMGVNTARIDTYAFSLGAGIAGLAGC--ALSQVGNVGPDLGQSYIVDAFMVVVTGGV 470 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L+ A L + + G + ++++ + + I R Sbjct: 471 GQLAGTVYAGLGLGVLNKFLEGYSGAVLAK-------------IMVLVCIVVFIQKRPQG 517 Query: 339 LLRLRTPSNF 348 + ++ S Sbjct: 518 MFAMKGRSAE 527 >gi|316935583|ref|YP_004110565.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315603297|gb|ADU45832.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 314 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 135/325 (41%), Gaps = 30/325 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 ++ ++ L Y + + + + A GL+I++G G +SL + IG Sbjct: 10 AILIALAVVMAVLPLLFPSSYYFRVAALVWVSALAAIGLNILMGKAGQVSLGHAGFFGIG 69 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ I + +GL L + V A++S ++G P L+ +G YLAIATL + + ++ Sbjct: 70 AYAVAIGPAHFGLHALLAVLVGALLSAMLAFLVGRPILRLKGHYLAIATLGLGVLVAMVI 129 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 T G G+ V F S Y++ G+ + Sbjct: 130 TTESGWTGGPDGMPVPKLSLFGWRVSGSTTW---------------YWITAGLLLIGTWF 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L T A+R + D++ A + + KL AF +++ + +AG+ A ++ Sbjct: 175 ALNLDDTPTGRAFRALHDSEIAARTAGVHVERFKLQAFVIAAVYASIAGSALAMMNGFVN 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD F ++ ++++V+LGG+ S+ A+L+ + +L Y Sbjct: 235 PDQAGFLHSVELVTMVVLGGLGSIVGSIVGAAVLVVLPQLLTVFQDY------------- 281 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 L+ + + + ++ ++ + Sbjct: 282 --EHFLLGLIIIVSMIFMRDGMVPM 304 >gi|146342685|ref|YP_001207733.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146195491|emb|CAL79516.1| putative branched-chain amino acid ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 343 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 132/322 (40%), Gaps = 22/322 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + L + LG ++ + + I + A L+++ G G ++ +G Sbjct: 5 VIAAVILAVLAILGTLLLGRFGAYLMHAVAIAAIGALSLNLLTGFCGQINFAQAGLLGVG 64 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ + G+ L +PV+ + + M++GLP+L+ RG Y AIATL I + + Sbjct: 65 AYTAGLAGNAGWD--VLALPVAGLAAVVTAMLIGLPALRLRGLYFAIATLAAQFILEYLF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +PIT+G +G+ + + + V + + ++ + Sbjct: 123 KFAEPITHGVSGLLIRP---------------MTVLGQPIQTDQGYAIVAIVLLLVTFLV 167 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + WLRRT + A+ +R+N+ + + K+ AF +S F G+AG + Sbjct: 168 MQWLRRTDLGRAFLVVRENEVVAKGMGINVARTKMLAFMISGFFAGVAGGLIGFTARLAH 227 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F S ++ ++++I+GG+ S+S + + E + ++ + Sbjct: 228 PESFGMSMSVDYVAMIIVGGLGSMSGAVLGAGFITLLPEAIQRLGE-----IVHISDLLS 282 Query: 318 MRHTTLMVIALFLVILMRSHSL 339 + + + ++ L Sbjct: 283 ALREMAFGLLIIVFLIFEGRGL 304 >gi|27376560|ref|NP_768089.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27349701|dbj|BAC46714.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 535 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 91/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ L S +I+ ++ Sbjct: 256 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEVIRTRYPGLFDYSLLIAVPLAFLVA 315 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 +I + + +L W + + S Sbjct: 316 GAIGVLIER--SIIRFLYGRPLETLLATWGLSLVLQQAVRTMFGPTNREVGNPSW-MSGA 372 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++L + A ++ LR TA+ R + N++ S+ Sbjct: 373 FELGQITITYNRLWILCFTLAVFAILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 432 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 433 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFTL 490 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + +++ + L I R L L+ + Sbjct: 491 GIANKFLEPVAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAVE 534 >gi|322390028|ref|ZP_08063566.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus parasanguinis ATCC 903] gi|321143282|gb|EFX38722.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus parasanguinis ATCC 903] Length = 315 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L V L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNLVWLGLLVAGFALIQVLVAAGVLNLFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAYS ILG S + + + + A+I+G +I+G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYSAAILGSKSPTYGAFFGAMVLGALIAGVVALIVGVPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +++ +TNG AGI ++ Sbjct: 126 GVSEIIRILIVNGGTLTNGAAGILGLPAFTTWQ-------------------------LV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YLFVVITTIFTINFLRSPIGRSTLSVREDEIAAESVGINTTKVKVIAFVFGAITAAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I V+ IV+ GG+ S+S A +L + + Sbjct: 221 LQAGFIGSVVPKDYSFTNTINVLIIVVFGGLGSMSGTVVAAIVLGILNMVLQ-------- 272 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F+ + +AL LV++ R LL S Sbjct: 273 -------DFSSVRMIIYSLALILVMIFRPGGLLGTWEFSL 305 >gi|126738255|ref|ZP_01753976.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] gi|126720752|gb|EBA17457.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] Length = 358 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 142/344 (41%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ +++ + + + F + + + +++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRFRYYVVMA------VAFGLIPFLINDYWANAILLPFLIYSIAAIGLNILVGYA 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ + ++ I+G ++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVILAGGITGLVCVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDTFGIIITGPNASAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L A + L R + +W IRD A + + +KL+AFAVS FI Sbjct: 185 TYLFCLIFLTFCALVARNLTRGTVGRSWMAIRDMDIAAEIIGVNPLKSKLTAFAVSGFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F +++ +V+ +VI+GG+ S+ A L+ + L Sbjct: 245 GVSGALFFAIYLGAVEVGEAFGITKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVLLKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + F ++ + +++ H L +L Sbjct: 305 VGVDVLGWPTDIVAHF---QLVIVGALIMFFLIVEPHGLAQLWR 345 >gi|116493835|ref|YP_805569.1| amino acid ABC transporter permease [Lactobacillus casei ATCC 334] gi|191637085|ref|YP_001986251.1| Branched-chain amino acid ABC transporter, permease protein [Lactobacillus casei BL23] gi|227533083|ref|ZP_03963132.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301065411|ref|YP_003787434.1| putative amino acid ABC transporter permease [Lactobacillus casei str. Zhang] gi|116103985|gb|ABJ69127.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Lactobacillus casei ATCC 334] gi|190711387|emb|CAQ65393.1| Branched-chain amino acid ABC transporter, permease protein [Lactobacillus casei BL23] gi|227189264|gb|EEI69331.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300437818|gb|ADK17584.1| Predicted amino acid ABC-type transport system, permease component [Lactobacillus casei str. Zhang] Length = 316 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 78/344 (22%), Positives = 144/344 (41%), Gaps = 43/344 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + I + +L+ + +I++ + I I ++ A GL++++G G SL Sbjct: 6 RSKLIWLATMIAGFVLIDIGELTGVINGFIENALVTIGINIILAVGLNLIIGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ L +L + V +++ +I+G+P+L+ RGDYLAIAT+ Sbjct: 66 HAGFMAIGAYATAIITQNISTPLGFYLAMLVGMIVAIIAALIVGIPTLRLRGDYLAIATM 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EI + I+ ITNG AG++ L T + Sbjct: 126 GAAEIIRVIINNL-KITNGPAGMFNIPPLASWPT-------------------------V 159 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++ I++ + A IRD+ A S+ KL+AF + +A + G+ Sbjct: 160 YILMCVTTVIVVNFIHSRAGRAVMAIRDDDIAAESIGINPTKWKLAAFVLGAATAAIGGS 219 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A+ I+P F +I ++ IV+LGG+ S++ A +L + + Sbjct: 220 LHASYLQTIAPGDFGIMNSIALLIIVVLGGVGSITGTFVAAVVLGIIDTVLQNF------ 273 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +AL L+++ + LL S +R Sbjct: 274 ---------GTLRMVIYALALILLMVFKPAGLLGHYELSFKRKR 308 >gi|114707991|ref|ZP_01440882.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Fulvimarina pelagi HTCC2506] gi|114536532|gb|EAU39665.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion [Fulvimarina pelagi HTCC2506] Length = 568 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 89/294 (30%), Gaps = 18/294 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ L S I+ ++ Sbjct: 289 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQELIRNHAPELFAWSLAIALPLAFLVS 348 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 L + + +L + + + Sbjct: 349 GLVGLGMERGL--IRFLYGRPLETLLATFGVSLILQQAVRTIFGPTNREVGNPDW-MSGA 405 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + A ++L L +T + R + N++ ++ + Sbjct: 406 FEVGLMSVTWNRLWIIVFALVVFAGLLLVLNKTVLGLQMRAVTQNRQMASAMGIRTPWVD 465 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S G+AG A S+ I +V+ GG+ +L L Sbjct: 466 AMTFALGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAMSL 523 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + ++++ + L I R L + Sbjct: 524 GVINKFLEPYAGAVLGK-------------IVVLVIIILFIQKRPRGLFAQKGR 564 >gi|91787502|ref|YP_548454.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91696727|gb|ABE43556.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 368 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 126/332 (37%), Gaps = 15/332 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A+V L+ + + Y M +++I +FA L ++ G GL+SL + I Sbjct: 17 VALVLGLIALVAFPFAGTDFY-TQMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAFFGIA 75 Query: 78 AYSYVILGSRYGLS-IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 Y+ L + +W +PV+ + SG +++G ++ G Y + T+ +++ + Sbjct: 76 GYALAFLTPQGEPVSLWWTLPVAVLASGLAALVIGFFVVRTHGIYFIMVTMAFAQMVFYL 135 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 K + L + F + + + +YY L + Sbjct: 136 FFDNKVLGGSDG----------LYINFKPSAELFGWTPFDLDGKRTLYYFTLATLLAVYA 185 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L + A IR N+ ++ KL+AF ++ + G+AG + A I Sbjct: 186 FLRRLLWSPFGRALAGIRVNEHRMRAMGYGTFGYKLAAFTLAGSLAGLAGYLWGAQTGYI 245 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM---NFYYFNSLLKFD 313 +P++ F + I +VILGGM + + ++ + + + L Sbjct: 246 NPELMGFHMSAHAIMMVILGGMGNFAGAIVGAFAFEYLLHVFKDLPTVDAGGVVGLGGGS 305 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + M + + V++ LL L Sbjct: 306 VNLGKHWQLWMGLFIVAVVVFAPRGLLGLVER 337 >gi|163739379|ref|ZP_02146790.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107] gi|163743626|ref|ZP_02151002.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161383097|gb|EDQ07490.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161387449|gb|EDQ11807.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107] Length = 358 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 141/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++ + L L FL + + + +++ + LIY + A GL+I+VG Sbjct: 20 FPIKFDRIRYYVVLA------LAFLVVPFVVNDYWANAILLPFLIYSIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ + ++ I+ + GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPEMSMFIHVLLAGGITALVCIGFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N A ++ F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAP---------ERDVFGIIITGPNAPAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L A + L R + +W IRD A + + AKLSAF VS FI Sbjct: 185 TYMFSLIFLAFCALVARNLTRGTVGRSWMAIRDMDIAAEIIGVNPLKAKLSAFGVSGFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F + + F +++ +V+ +VI+GG+ S+ A L+ + + Sbjct: 245 GVSGALFFSVYLGAVEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVVLKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + ++ + + ++ H + +L Sbjct: 305 VGVDVLGWPTDI---VAHIQLVIVGALIVIFLIAEPHGIAQLWR 345 >gi|90019876|ref|YP_525703.1| Fis family transcriptional regulator [Saccharophagus degradans 2-40] gi|89949476|gb|ABD79491.1| inner-membrane translocator [Saccharophagus degradans 2-40] Length = 537 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 99/319 (31%), Gaps = 22/319 (6%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 L + + + ++ A GL+I G +G++++ +GAY+ + + Sbjct: 240 LAFFGFTENVVFGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMIMLGAYTTFAVQQFFP 299 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 I + ++ + +G+ + +L L + L+ I+ Sbjct: 300 GLIEYSLFIAIPAAFLVSGSVGVVIERTVIRHLYGRPL-------DTLLATFGISLLLQQ 352 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + + + + Y+ + F+ + L L++T + Sbjct: 353 AVRVYHSNNVPVITPEWMSGSWVVNGALSFTYNRIYIFIFALFVLGMLALLLKKTLLGLQ 412 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + N+ S+ F + S G+AG + + F I Sbjct: 413 MRAVTQNRAMANSMGIRSSHVDALTFGLGSGIAGIAGVAISQITNVGPNLGQGFI--IDS 470 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +V+ GG+ +L A L V + +++I + Sbjct: 471 FMVVVFGGVGNLLGTFFAAMGLGVVTKFLEPEVGAVVGK-------------IMVLIFII 517 Query: 330 LVILMRSHSLLRLRTPSNF 348 L I R L L+ Sbjct: 518 LFIQWRPRGLFALKGRFVE 536 >gi|317401155|gb|EFV81804.1| hypothetical protein HMPREF0005_01226 [Achromobacter xylosoxidans C54] Length = 302 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 134/312 (42%), Gaps = 30/312 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y+ + ++++V+ A GL IV+G G +L+ Y +G Y+ ++ + + Sbjct: 21 PFVASGYVIYVVNLLMVFVVLALGLHIVIGETGQFALSHAAFYGVGIYTAGLINNLWHPP 80 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 ++ I +++ G ++G +L+ R YLA++T E Q + + W+ +TNG G Sbjct: 81 FFVSILAGGLLAAVLGYLIGALALRMRDIYLALSTFAFGEAMQWVFLNWQSVTNGSNGFR 140 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 ++ F ++ +I Y ++ + L + + L R+ + +A+R Sbjct: 141 ISPATLFGYE---------------LVSDIKAYPFVVAIAALLLWVTVALSRSQLGSAFR 185 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R++ A ++ + K +AF +S+A+ G+AG + I P+ F I++++ Sbjct: 186 AVRESDVAAQAMGVNVNAIKRTAFTLSAAYAGIAGGMYTTFASFIHPESLGFQTTILILT 245 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V++GG+ S+ + EL + + + L Sbjct: 246 MVVVGGIGSVRGAIAGAIGFGLISELLRQALSF---------------QEIIYGVILMGF 290 Query: 332 ILMRSHSLLRLR 343 ++ L R Sbjct: 291 MMFAPKGLFAGR 302 >gi|119468886|ref|ZP_01611911.1| putative branched-chain amino acid ABC transporter, permease protein [Alteromonadales bacterium TW-7] gi|119447538|gb|EAW28805.1| putative branched-chain amino acid ABC transporter, permease protein [Alteromonadales bacterium TW-7] Length = 357 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 129/325 (39%), Gaps = 19/325 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V + L Y ++ IQI + A GL+I+VG G +SL + GA+ Sbjct: 31 VAIIAIALLCCAPFLVDAYFLTLFIQISYLGIAALGLNILVGYTGQISLGHGAFFGFGAF 90 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L +G+ + L IP++ ++ GM+ GLP+ + +G YLAIATL I ++ + Sbjct: 91 ASAWLNMSFGIPVLLCIPIAGFLTMLVGMLFGLPASRIKGLYLAIATLAAQFILEDFFAR 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + T G AG F +Y+ L Sbjct: 151 AQWFTGGSAGSSADPVSIFGFVFNTDQ---------------SFFYIALFALVFMYIWGC 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ A+ +RD+ + + + +L +F VSS + G+ GA +A +S + Sbjct: 196 NLMRSREGRAFIAVRDHYLSAEIMGIKLNKYRLLSFGVSSFYAGIGGALYAHYLGYVSAE 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG----MNFYYFNSLLKFDCS 315 F +I ++++I+GG+ S+ ++ + E+ M + ++ Sbjct: 256 GFTLFMSIQFLAMIIIGGLGSIKGTLMGVVFMVFLPEMLESGVGLMKMTDWGNIPMVVDG 315 Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340 + + + L ++ + Sbjct: 316 LAYIKEMAIGLVIILFLIFEPEGMA 340 >gi|154244595|ref|YP_001415553.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154158680|gb|ABS65896.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 347 Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 127/347 (36%), Gaps = 35/347 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L++F + Y+ + I I + A L++++G G LSL V + IG Sbjct: 4 FIAPLFLVVFALVPLGLKDPYLLNALIITGILTICAMSLNLLLGFTGQLSLGHVAFFGIG 63 Query: 78 AYSYVILG-------------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 AY + + G S + ++ ++G CG ++G S + RG Y I Sbjct: 64 AYVSALTALGFDVSLPFGLRVTHEGGSPLMGFVLAVGLTGLCGYLIGRLSFRVRGAYFVI 123 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 T+ +E+ + + + W +T G + + + + ++ Y Sbjct: 124 VTISFAEVVRLVALNWVELTQGPLALTAIPNMV---------LPVPGLGDVALRSKMQNY 174 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++L + +S II L + A R +++N+ SL A +S+A G Sbjct: 175 YLVLAVAAVSYLIIARLVASRFGRAMRGLKENESLALSLGINATRTLTVAATISAAMAGA 234 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+ +A I PD+F FS + ++ +V+ GG +L+ + + Sbjct: 235 AGSLYAHYIRIIDPDVFLFSYTVTMVIMVVSGGKGTLAGPLVGGILFGLLPVALR----- 289 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + L ++ + ++ R Sbjct: 290 --------PVMAPEAQWIVYGAILIAILFLMPRGIVPALESLALRRR 328 >gi|218780943|ref|YP_002432261.1| branched-chain amino acid ABC transporter permease [Desulfatibacillum alkenivorans AK-01] gi|218762327|gb|ACL04793.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 353 Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 67/324 (20%), Positives = 119/324 (36%), Gaps = 28/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V+ + L L YI + I I+ + A ++ G G ++ + + + Sbjct: 26 VTVMVFAIALLALPLVTQDYYILRIMILTSIFAILAASWDLLSGFTGQMNFGHALFFGVA 85 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY +L R GL + IP+ AM + G+I+G+P L+ +G YLA+ TL I ++ Sbjct: 86 AYVTALLNLRLGLPPYFSIPLGAMGAVLTGLIVGIPCLRLKGSYLALTTLAFPIILMGLV 145 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + IT G+ G+ +L YYV + + + Sbjct: 146 FAFPGITGGELGLSGLTKLTGSRVMD--------------------YYVTTSLMLILGGV 185 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + IR+++ A + KL AF +S F G+AG +A Sbjct: 186 MWKITDSNTGVILHAIREDEVAARAAGINTTRYKLLAFCLSGFFAGIAGGLYAHFMRLAG 245 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P + + VI + GGM S+ IL +E+ L S Sbjct: 246 PSTLEIGLSFQVIIWSVFGGMVSIYGPIAGVYILNPFMEVLRIF--------LDNFPSLP 297 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + + L + L+ Sbjct: 298 EMRMFIFAALVLLTLRFMPEGLIP 321 >gi|312868272|ref|ZP_07728472.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus parasanguinis F0405] gi|311096017|gb|EFQ54261.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus parasanguinis F0405] Length = 315 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L V L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNIVWLGLLVAGFALIQVLVAAGVLNLFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAYS ILG S + + + + A+I+G +I+G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYSAAILGSKSPTYGAFFGAMVLGALIAGIVALIVGVPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +++ +TNG AGI ++ Sbjct: 126 GVSEIIRILIVNGGTLTNGAAGILGLPAFTTWQ-------------------------LV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YLFVVITTIFTINFLRSPIGRSTLSVREDEIAAESVGINTTKVKVIAFVFGAITAAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I V+ IV+ GG+ S+S A +L + + Sbjct: 221 LQAGFIGSVVPKDYSFTNTINVLIIVVFGGLGSMSGTVVAAIVLGILNMVLQ-------- 272 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F+ + +AL LV++ R LL S Sbjct: 273 -------DFSSVRMIIYSLALILVMIFRPGGLLGTWEFSL 305 >gi|296876043|ref|ZP_06900099.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus parasanguinis ATCC 15912] gi|296432954|gb|EFH18745.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus parasanguinis ATCC 15912] Length = 315 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L V L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNLVWLGLLVAGFALIQVLVAAGVLNLFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAYS ILG S + + + + A+I+G +I+G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYSAAILGSKSPTYGAFFGAMVLGALIAGIVALIVGVPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +++ +TNG AGI ++ Sbjct: 126 GVSEIIRILIVNGGTLTNGAAGILGLPAFTTWQ-------------------------LV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YLFVVITTIFTINFLRSPIGRSTLSVREDEIAAESVGINTTKVKVIAFVFGAITAAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I V+ IV+ GG+ S+S A +L + + Sbjct: 221 LQAGFIGSVVPKDYSFTNTINVLIIVVFGGLGSMSGTVVAAIVLGILNMVLQ-------- 272 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F+ + +AL LV++ R LL S Sbjct: 273 -------DFSSVRMIIYSLALILVMIFRPGGLLGTWEFSL 305 >gi|110678081|ref|YP_681088.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] gi|109454197|gb|ABG30402.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] Length = 358 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 79/344 (22%), Positives = 149/344 (43%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F +R ++Y L + + + + +++S+ + LIY + A GL+I+VG Sbjct: 20 FPIRFDRYRYYAVL------FIAIVIIPFVINDYWVNSIFMPFLIYSIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ + +S +I+ G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVLLSGVITAGVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWMFNRVSWFYNYS---------ASGQINAPERDTFGIIITGPNTDAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L SA I L R ++ W IRD A + + AKL+AFAVSS F+ Sbjct: 185 AYVFCLIFTIASAIIARNLTRGSMGRQWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A ++F +++ +V+ ++I+GG+ S+ A L+ + L Sbjct: 245 GISGALFFAIYLGAVEVGEVFGITKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVLLKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + +F + ++ + + +++ H L +L Sbjct: 305 IGVDWFGWPTDI---VAHLNLVIVGALIIVFLIVEPHGLAQLWR 345 >gi|291287778|ref|YP_003504594.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809] gi|290884938|gb|ADD68638.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809] Length = 314 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 120/324 (37%), Gaps = 29/324 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V + +G +Y + ++I + ++++G G++S+ Y IGA Sbjct: 8 LFVLCAAALIGIGFGVDNEYYLGVATLMMINALNTAAFNVLLGYGGVISMGQAAFYGIGA 67 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y +L YG+ + + ++ ++ I+G P LK G YLA+ATL I + Sbjct: 68 YVAAVLSVNYGVPPAVTLLIAPAMAFVVAWIVGYPVLKLHGHYLAMATLGFGMIVYIFMN 127 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 ++ IT G +G L FLG + + F Y + + + Sbjct: 128 EFSGITGGPSGFMGIGNLSFLGFELATEKSF--------------YIFMSTFFLICVLLY 173 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 ++ + + I++++ A S + KL FA +A + G + ISP Sbjct: 174 EVFDKSFLHYKLKFIKNSESACRSYGINVTRTKLMVFASVAAITALNGVLYTYYTHFISP 233 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F F +I ++ + +GG+ +S L + E+ + Sbjct: 234 VSFSFKYSISLVCMATVGGLGYISGGIVGAVFLGFIPEVFATFEDF-------------- 279 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + L +VI+ + Sbjct: 280 -EMIIYGGLLAVVIMFFPGGIAGT 302 >gi|197294994|ref|YP_002153535.1| putative amino-acid transport system protein [Burkholderia cenocepacia J2315] gi|195944473|emb|CAR57075.1| putative amino-acid transport system component [Burkholderia cenocepacia J2315] Length = 347 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 117/298 (39%), Gaps = 12/298 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++ L S S+ ++L++ + A G ++++G GLLS I + +G+Y+ Sbjct: 32 LAVVAACVLPLVLSSG---SLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYTA 88 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 ++ +R S+ + +A+ ++G S++ RG Y + TL ++F + Sbjct: 89 GLVLTRGVASVTAALVAAAVFGAIAAALVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTP 148 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ R + F P + Y + + ++L + Sbjct: 149 DVTGGDNGLLDIPRPA---------LSAFGHPLVSLDSPWRYYGFVAVLFVAVFWLLLRV 199 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ IRDN+ + + KL+AF +S A G+AGA A Sbjct: 200 SRSVFGRTLLAIRDNEARAAAAGYDVKRFKLAAFVISGAVTGLAGALHALMTGIAPLSNI 259 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + +++ + ++GG +L A + + + + L + ++ Sbjct: 260 DYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRWLLLLGLVLIAVSLF 317 >gi|158321521|ref|YP_001514028.1| inner-membrane translocator [Alkaliphilus oremlandii OhILAs] gi|158141720|gb|ABW20032.1| inner-membrane translocator [Alkaliphilus oremlandii OhILAs] Length = 351 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 132/330 (40%), Gaps = 45/330 (13%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----- 90 Y + IY + ++++ G GL SL A+GAY+ +L Sbjct: 28 DSYKIRVLNLCAIYAVLGLSMNLINGFTGLFSLGHAGFMAVGAYTTALLTMTPQSKEATF 87 Query: 91 --------------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 ++ + + ++S ++G P+L+ +GDYLAIATL SEI + + Sbjct: 88 FLVPIVEPLAKIQLPFFVALIIGGLLSAMVAFLIGAPTLRLKGDYLAIATLGCSEIIRIV 147 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + ITNG G+ + GM + Sbjct: 148 FTQTQNITNGPTGLKSIPNTTN-------------------------LWWSFGMMVFTIL 182 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 I++ L ++ ++ IRD++ A S+ + K+ +F + + F G+ G I Sbjct: 183 IMVALINSSYGKVFKAIRDDEIAAESMGINLFKHKVLSFVIGAFFAGVGGGLLGNLLGTI 242 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P+MF+F+ V+ I++LGGM S++ ++ I+ +E ++ +K Sbjct: 243 NPNMFRFTLTFNVLLIIVLGGMGSITGTVISSFIVTAGLEYLRFLDESINLGFIK-MEGV 301 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + L +V++ + L+ + S Sbjct: 302 AGIRMVVFSTLLMIVVIFFRNGLMGNKEFS 331 >gi|260425357|ref|ZP_05779337.1| inner-membrane translocator [Citreicella sp. SE45] gi|260423297|gb|EEX16547.1| inner-membrane translocator [Citreicella sp. SE45] Length = 358 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 82/329 (24%), Positives = 144/329 (43%), Gaps = 13/329 (3%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L V ++ T S+ ++ I ILIY + A GL+++ G G LSL Sbjct: 26 AVLLAVILAFAWVIFPLTASEFTFQTLLIPILIYSLAALGLNLLTGYAGQLSLGTAAFMG 85 Query: 76 IGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ ++ L+ + I S + S G+ G+PSL+ +G YLAIATL Sbjct: 86 VGAYACYKMVTLMPWLNPIVAILFSGVFSAGVGVAFGIPSLRIKGFYLAIATLAAQFFLV 145 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + KW + N V +L F + + I Y+V+LG+ L Sbjct: 146 WLFEKWGWLYNYN---------ASGAIQVPNLEIFGVYVAGPQASSIVQYFVVLGVVTLL 196 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASR 253 + + L R + W+ RD A + ++ +KL+AFAVSS +G+AGA F R Sbjct: 197 TVVCINLTRGNLGRTWKATRDMDIAAELIGINLMRSKLTAFAVSSYVVGVAGALFVFMWR 256 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 P++F + ++ I I+GG+ S+ +++G+ L + + Sbjct: 257 GAAEPNLFDIPLSFRILFIAIIGGLGSVLGNYLGAILIVGLPVLLNTLPEAL--GIPISS 314 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + ++ + +++ H L RL Sbjct: 315 ATVEHLNIMIVGSLIVFFLIIEPHGLARL 343 >gi|223938439|ref|ZP_03630332.1| inner-membrane translocator [bacterium Ellin514] gi|223892858|gb|EEF59326.1| inner-membrane translocator [bacterium Ellin514] Length = 325 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 120/329 (36%), Gaps = 25/329 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L L + L + + Y + + I V+ A L++V G G SL A Sbjct: 7 IVLLTAIALSAVVALFSNQIDPYFLLVVTNVGINVILAVSLNLVNGYTGQFSLGHAGFMA 66 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY+ + G ++ + + + A + L + + I S + Sbjct: 67 VGAYTASAITLFMGPRLFTALGSQGIPAVAGLFLFALIAGGLVAALAGLIVGIPSLRLKG 126 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + G + R++ I ++ G+ ++ Sbjct: 127 DYLAIVTLGFG----------EIIRVIFRNIEVLGGALGLNGIPSYTNFFWTFGVVAITT 176 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +++ + + + + D++ A ++ K+ AF V + F G+AG FA S Sbjct: 177 YVVVSMVNSTYGRGFLAVHDDEVAAEAMGINTTRYKIIAFVVGAFFAGVAGGLFAHSTRS 236 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I P F F ++I ++ +VILGGM + + A +L + E + Y Sbjct: 237 IDPRGFDFMKSIEIVVMVILGGMGNTVGVIIAAVLLTLLPEFLRPIAEY----------- 285 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + L +++L R L +R Sbjct: 286 ----RMMIYSLLLIVLMLARPQGLFTIRR 310 >gi|114707754|ref|ZP_01440648.1| ABC transporter ATP-binding/permease protein [Fulvimarina pelagi HTCC2506] gi|114536743|gb|EAU39873.1| ABC transporter ATP-binding/permease protein [Fulvimarina pelagi HTCC2506] Length = 584 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 105/326 (32%), Gaps = 39/326 (11%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L + + +Y+ ++ I+ L + A + +V G G+L+ + IGAY+ Sbjct: 3 LIALTTVMIAPYFLDRYLVNVLIRALFLAVLAITVDLVWGFAGILTFGQSAFFGIGAYAC 62 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLP-----SLKFRGDYLAIATLIMSEIFQNI 136 ++ + YG + + A + L Y +I TL + + I Sbjct: 63 ALVATHYGFGPYWFFGAFLIGLAAAALTAWLVGVLSFYHGASPLYSSIITLALPIVLVQI 122 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + T +GI Y+ T + + M + Sbjct: 123 IFAGGRFTGSSSGISGFPTYYWAVETW--------------------FVIAGVMLVVIGC 162 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 R+ + IR+N+ L + K++ F + AG +AA + + Sbjct: 163 FAWLFVRSDLGRILVAIRENEDRCAYLGIPVSRIKIALFTACGSIGAAAGFGYAAFTNVV 222 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P++ F + V LGG +L + G + + Sbjct: 223 APELGGFLLGTESLIWVALGGRGTLIGPIFGAIGIDVTSSYLSGTLPFLWK--------- 273 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + +VI++ + L Sbjct: 274 -----FIVGVLFVIVIVLLPNGFASL 294 >gi|163736020|ref|ZP_02143445.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] gi|161390687|gb|EDQ15031.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] Length = 358 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F +R ++Y + L + + + + +++S+ + LIY + A GL+I+VG Sbjct: 20 FPIRFDRYRYYVVL------FIAIVVIPFMVNDYWVNSIFMPFLIYSIAAIGLNILVGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +S+++ + ++ I+ A G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPDVSMFIHVLLAGAITAAVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWMFNRVSWFYNYS---------ASGQINAPERDTFGIIITGPNTDAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L A I L R A+ W IRD A + + AKL+AFAVSS F+ Sbjct: 185 AYVFCLIFTIACAVIARNLTRGAMGRQWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A ++F +++ +V+ ++I+GG+ S+ A L+ + L Sbjct: 245 GISGALFFAIYLGAVEVGEVFGITKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVLLKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + +F + ++ + L +++ H L +L Sbjct: 305 IGVDWFGWPTDI---VAHLNLVVVGALIILFLIVEPHGLAQLWR 345 >gi|115523026|ref|YP_779937.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115516973|gb|ABJ04957.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 314 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 81/346 (23%), Positives = 143/346 (41%), Gaps = 35/346 (10%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 RL + IL LA+V +L F Y + + + A GL+I++G G Sbjct: 3 TRLGRRPVILLSLALVIAVLPLAFP-----SSYYFRVASLVWVSAFAAIGLNILMGKAGQ 57 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 +SL + IGAY+ IL + GL + V A +S ++G P L+ +G YLAIA Sbjct: 58 VSLGHAGFFGIGAYAVAILPTHVGLHSLAAVLVGAALSALLAFLVGRPILRLKGHYLAIA 117 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL + + ++ T G G+ VA + F S + Y+ Sbjct: 118 TLGLGVLIAMVITTESGFTGGPDGMPVAKLVLFGWRASGSDVW---------------YW 162 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + GM L I L L T A+R + D++ A + KL AF +++ + +A Sbjct: 163 ITGGMLLLGTWIALNLDDTPTGRAFRALHDSETAARVAGIHVNRFKLQAFVIAAVYGSLA 222 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G+ A ++PD F ++ ++++V+LGG+ S+ A+LI + +L Y Sbjct: 223 GSALAMMNGFVNPDQAGFLHSVELVTMVVLGGLGSIVGSIVGAAVLIVLPQLLTVFQEY- 281 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + + L ++ ++ + R Sbjct: 282 --------------EHFMLGLLIILSMIFMRDGMVPMVRKLLARAR 313 >gi|91788847|ref|YP_549799.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91698072|gb|ABE44901.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 340 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 120/322 (37%), Gaps = 15/322 (4%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 ++ M +++I +FA L ++ G GL+SL + I Y+ L + Sbjct: 29 FPFAGTEFYTQMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAFFGIAGYALAFLTPQGEP 88 Query: 91 S-IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 +W +PV+ + SG +++G ++ G Y + T+ +++ + K + Sbjct: 89 VSLWWTLPVAVLASGLAALVIGFFVVRTHGIYFIMVTMAFAQMVFYLFFDNKVLGGSDG- 147 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 L + F + + + +YY LG+ + + L + A Sbjct: 148 ---------LYINFKPSAELFGWTPFDLDGKRTLYYFTLGVLLAVYAFLRRLLWSPFGRA 198 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 IR N+ ++ KL+AF ++ + G+AG + A I+P++ F + Sbjct: 199 LAGIRVNEHRMRAMGYGTFGYKLAAFTLAGSLAGLAGYLWGAQTGYINPELMGFHMSAHA 258 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 I +VILGGM + + ++ + + + M + + Sbjct: 259 IMMVILGGMGNFAGAIVGAFAFEYLLHVFKDLPTLEVLGSVNLG----KHWQLWMGLFIV 314 Query: 330 LVILMRSHSLLRLRTPSNFLER 351 V++ LL L + Sbjct: 315 AVVVFAPRGLLGLAQKFMKRKE 336 >gi|239905226|ref|YP_002951965.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239795090|dbj|BAH74079.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 345 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 137/358 (38%), Gaps = 45/358 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + I+ L V L FL+L Y + I I ++ A L+++ G GL S Sbjct: 1 MRRGQTIILNLVAVLALGGFLWLAEGNFDGYKIQILNLIAINIILALSLNLIYGFTGLFS 60 Query: 68 LNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGM 108 L AIGAY I + + +++ A G Sbjct: 61 LGHAGFMAIGAYICSILIMTPDQKDMLFLLEPAYDWVQNAHAPFLVAVLAGGLVAAAIGA 120 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 ++G P L+ DYL IATL +EI + + + +TNG G Sbjct: 121 LVGFPLLRLGDDYLGIATLGFAEIIRVLANNFPRLTNGALGFKGIP-------------- 166 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 + + G C ++ +I+ L ++ N + IRD++ A ++ + Sbjct: 167 -----------DYANLWWNFGWCLVTLYVIVRLLKSNTGNVLKAIRDDEAAARAMGVNVF 215 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 KL +F V + F G+ GA A+ I P MF F+ ++ IV+ GG+ SLS A Sbjct: 216 RYKLLSFTVGAFFAGIGGALLASLLTTIDPKMFLFTLTFNILMIVVAGGLGSLSGTVMAG 275 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + ++E + + + +AL ++IL R L+ +R Sbjct: 276 IGITVLLEWLRVVENPVDIFGYELP-GVPGMRMVVFSLALIMIILFRREGLMGMRELH 332 >gi|325847035|ref|ZP_08169861.1| branched-chain amino acid ABC transporter, permease protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481007|gb|EGC84052.1| branched-chain amino acid ABC transporter, permease protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 322 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 71/336 (21%), Positives = 140/336 (41%), Gaps = 45/336 (13%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L ++ ++ + + Y S+ + I ++ + L+I VG+LG ++L + Sbjct: 13 FVLILISFAIIQILISVGIIDSYWQSIIFLLCINIILSISLNITVGNLGQITLGHAGFMS 72 Query: 76 IGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IGAYS I + ++ + + + + + +G+P L+ GDYLAI TL E Sbjct: 73 IGAYSAAIFLKTGLVQGIFGFFIALIIGGLFAFLFSLAIGVPVLRLNGDYLAIVTLAFGE 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + ++ IT G G+ I + ++ + Sbjct: 133 IIRVVVENL-SITGGAQGMAGIP-------------------------TIDSFGLIFFVT 166 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 LS + + + A I+DN+ A S +K+ AF +S+ F G+AGA +A Sbjct: 167 VLSVVFMYSIMTSRFGRAVLAIKDNELAAESCGINTTKSKIFAFTLSALFAGVAGAIYAQ 226 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + I+ ++F ++++ ++ +V+LGGM S + +T +L V E+ Y Sbjct: 227 TTGVIAANVFNYNKSFDILVMVVLGGMGSFTGSIISTIVLTVVPEILRAFAEY------- 279 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +V++ R L+ S Sbjct: 280 --------RMIIYSVILVIVMIFRPQGLMGREEFSI 307 >gi|319946504|ref|ZP_08020740.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus australis ATCC 700641] gi|319747335|gb|EFV99592.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus australis ATCC 700641] Length = 315 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 82/340 (24%), Positives = 145/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L + L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNLVWLGLLIAGFALIQVLVAAGVLNLFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAYS ILG S + + + + A+I+G +I+G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYSAAILGSKSPTYGAFFGAMVLGALIAGLVALIVGVPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +++ +TNG AGI ++ Sbjct: 126 GVSEIIRILIVNGGTLTNGAAGILGLPAFTTWQ-------------------------LV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YLFVVITTIFTINFLRSPIGRSTLSVREDEIAAESVGINTTKVKVIAFVFGAITAAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F+ I V+ IV+ GG+ S+S A +L + + Sbjct: 221 LQAGFIGSVVPKDYSFTNTINVLIIVVFGGLGSMSGTVVAAIVLGILNMVLQ-------- 272 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F+ + +AL LV++ R LL S Sbjct: 273 -------DFSSVRMIIYSLALILVMIFRPGGLLGTWEFSL 305 >gi|222081679|ref|YP_002541044.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726358|gb|ACM29447.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 328 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 123/311 (39%), Gaps = 25/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 +Y+ I LI+++ A GL+++VG GLLSL + IGAY+ +L YG Sbjct: 31 PFIGSRYVTHALIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAYTAGLLAVTYGTP 90 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 ++ + +++GA + +G+P+L+ R + TL I Q I W +T G G+ Sbjct: 91 FYVNAVAAGLVAGALALPLGIPALRLRSTSFVMCTLGFVIIGQAIAKNWISVTRGDMGLS 150 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + S V YY+ L + L+ ++ + R+ Sbjct: 151 GIPKP----------HFALGPWSFTVSGTTNFYYLALAVGALATLVVWAIVRSPAGRNMI 200 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IR+N+ S+ KL F +S+ F G+ G+ +A +SP F+ + ++ Sbjct: 201 AIRENETLAESVGIPTWRYKLIVFMISAVFAGVGGSLYAHYLTVVSPLTFQMYYSTTMLI 260 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 IV+ GG +S + + +G+ E + L ++ Sbjct: 261 IVLGGGAGMISGTVFGSLLFVGLTEALR---------------VTPELRMIAYGLCLLVL 305 Query: 332 ILMRSHSLLRL 342 + L Sbjct: 306 VFWFKKGFAPL 316 >gi|110680748|ref|YP_683755.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] gi|109456864|gb|ABG33069.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] Length = 342 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 115/338 (34%), Gaps = 9/338 (2%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + + ++ L +F L + M Q LI V F GL I VG+ G++ Sbjct: 6 KQKRLSAWSTPILLIAILAVFTLLVTLLGDNSLARMAAQTLIRVTFVVGLWIFVGNSGIV 65 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S A+GAY L R + L + ++ A + Sbjct: 66 SFGHAGYMAVGAYCSAWLTLRPQMKGMFLPDLWPFLATAEWSVFPAAV--------VSGL 117 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L + + + A S + +V Sbjct: 118 LAAFIALLSGAAILRLSGIAASIATFAFLAIVYTVYSSWEGVTGATSSVVGLTRYADQWV 177 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 LG + W +A A R R+++ A + + +L A VS+ F G+AG Sbjct: 178 TLGWASATILAAAWYANSASGLALRASREDEVAADASGINMYRHRLIALVVSAFFAGVAG 237 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A F S ++P+ F I ++++++GG+ SL+ +L ++E M Sbjct: 238 ALFGHSLGVLNPNSFYLGVTFITLAMLVVGGIGSLTGAVMGVLVLSIIIEALVRMERGME 297 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 F ++ + + LV+++R L R Sbjct: 298 IGEATFALPTG-AQEIIIGVIMILVLILRPTGLTGGRE 334 >gi|259416385|ref|ZP_05740305.1| inner-membrane translocator [Silicibacter sp. TrichCH4B] gi|259347824|gb|EEW59601.1| inner-membrane translocator [Silicibacter sp. TrichCH4B] Length = 399 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 125/369 (33%), Gaps = 36/369 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYID-------SMGIQILIYVMFAWGLSIVV 60 L+K D L L+ + L + + + + +I+ +FA G +I+ Sbjct: 4 LDKRDTTLLLIVAGLTIFAPFLLNPFPTDSGLAQFNAGYPDLMQRFVIFGIFAIGFNILF 63 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G LS +G+YS V + +++ I +S +ISG +++G SL+ G Sbjct: 64 GLTGYLSFGHAAFLGVGSYSAVWMFKLLSMNVLPAIILSVIISGLFALVIGFISLRRSGI 123 Query: 121 YLAIATLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVR 164 Y +I TL +++ ++ P G + + Sbjct: 124 YFSILTLAFAQMSFSLAYSVLTPITNGETGLQLTLDDPRVLGVSATADGSIPVTNLFGME 183 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + + YY+ + + + + + R+ R ++ NQ+ Sbjct: 184 MRSTYHLIVGPWDFQFNMGYYLCALVMIAAFYLSIRIFRSPFGMMLRAVKSNQQRMNYTG 243 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 L+AF +S + G+AG A+ + +++ + V+ + ILGG +L Sbjct: 244 LNSKPYTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGP 303 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLV 331 + + +N + F + I LV Sbjct: 304 VLGAGFIKYFENIFSKINDNVLHGWFSFLPDGLEDFVVFIIHPFIGKGWHLTLGILFMLV 363 Query: 332 ILMRSHSLL 340 ++ L+ Sbjct: 364 VIYLPGGLV 372 >gi|289523480|ref|ZP_06440334.1| high affinity branched-chain amino acid ABC transporter, permease protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503172|gb|EFD24336.1| high affinity branched-chain amino acid ABC transporter, permease protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 348 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 121/339 (35%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 ++ ++ + V +FL+ Y + I I + A GL+++ G G+ S Sbjct: 2 MSSRRNLILNILAVLCFGMFLWWAEGHLSGYQIQIMNLIAINTILALGLNLIYGFGGMFS 61 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY+ +L +I + + ++ + A Sbjct: 62 LGHAGFMAIGAYTCALLILPPLQK--EMIFILQPLRWPFSVLHAPFLVAVVLGGAMAAVF 119 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + + + G R+ + + Y L Sbjct: 120 GILVGIPILRLGGDYLGIATLGFAEIVRVVANNIPSITNGALGLKGIPPYANIWWNYGFL 179 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + + + + N + IRD++ A ++ + K+ FA+ + G+ GA Sbjct: 180 LVVLYSMV----RVVNSNYGNVLKAIRDDEMAAKAMGIDVFRYKIQVFAMGTFLAGIGGA 235 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A+ I P M+ F+ V+ +V+ GG+ S++ A+AI+ ++E + Sbjct: 236 LQASFITTIDPRMYMFTMTFNVLMMVVAGGLGSITGTCIASAIITILLEWLRIVESPMDF 295 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + +AL +IL R ++ ++ + Sbjct: 296 GPVHIP-GIPGMRMVIFSLALIFIILFRREGIMGMKELT 333 >gi|119716072|ref|YP_923037.1| inner-membrane translocator [Nocardioides sp. JS614] gi|119536733|gb|ABL81350.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Nocardioides sp. JS614] Length = 350 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 70/325 (21%), Positives = 139/325 (42%), Gaps = 29/325 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + A L++ FL +Q Y + IL++ +FA GL++++G GLLS + Sbjct: 9 VIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLSFGHAAMFG 68 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY L G+ + ++ +S + S G+++GL S + GDYLA+ TL + +IF Sbjct: 69 AGAYISARLLLDTGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITLGVGQIFYL 128 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L K +T G G+ F G + +Y +L + ++ Sbjct: 129 YLNNAKEVTGGATGLPGIPAGNFFGWD--------------LALIENIYLFILVVTIVTT 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + + R+ + A+ IR+++ + + K+ F + S G+AG Sbjct: 175 AFAWLIGRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGF 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + P F ++I+++ +V++GGM + + + ++IG E + Y Sbjct: 235 VGPATFNVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADY----------- 283 Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340 + + + +V+L + L+ Sbjct: 284 ----RSMIFGALILIVLLWKPGGLV 304 >gi|326333808|ref|ZP_08200041.1| sugar ABC transport system [Nocardioidaceae bacterium Broad-1] gi|325948390|gb|EGD40497.1| sugar ABC transport system [Nocardioidaceae bacterium Broad-1] Length = 339 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 15/283 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+A L L L A +I S+G+ I Y A + V G G +SL + Sbjct: 4 LVAAAVGLALILAFPALAPDPFILSVGVVIASYAALAVAWNFVGGLTGYISLGHAAYSGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y +L + G++ WL + V+A++ G + +G+ SL+ RG I ++ + I + Sbjct: 64 GGYGTALLITEAGVNPWLSMVVAAVLVGVAAVPIGIASLRVRGASFVIVSIALVLILLLV 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 W +T G G+ V RF +Y+ +G+ ++ + Sbjct: 124 AQSWAGVTGGSNGLRVPRPFGTDVLRPEQHERF--------------FYLFVGLTLIALA 169 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + R+ + + IR+++ +L KL F VS+ F MAG +A + Sbjct: 170 LWWVIDRSRLGTGLKAIREDEDKAQALGVPTFAYKLVVFVVSAFFTAMAGGMYALWFGSL 229 Query: 257 SP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 P F ++ + +LGG+ SL I+ VE Sbjct: 230 DPIFQFSILTGSYLVLMSLLGGVRSLLGPVVGAVIVGYAVEFF 272 >gi|317122615|ref|YP_004102618.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter marianensis DSM 12885] gi|315592595|gb|ADU51891.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter marianensis DSM 12885] Length = 346 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 119/305 (39%), Gaps = 27/305 (8%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y + ++L++ +FA L +++G GL+SL + G Y+ +L GL+ W + Sbjct: 36 YGLGLLTEMLVFGVFAMSLDLLIGHAGLVSLGHAAFFGAGGYAAGLLARHLGLTSWPGLV 95 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + L+ G Y + TL + ++ ++ W+P+T G G+ R Sbjct: 96 AGILAGVLLAALFAPVVLRASGAYFLMLTLALGQLLYGMVWLWRPVTGGDDGLPGLPRPE 155 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + YY L ++A + WL + R IRDN+ Sbjct: 156 LP------------LLGGILWDNVAFYYFTLVCTGVAALSMAWLVTSPFGLTLRGIRDNE 203 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 SL K + + +++ + G+AG +A +SP ++ + + +VILGG Sbjct: 204 LRLESLGYHTWLYKYAIYVIAAGYAGLAGTLYAYYAGYVSPHNLSWALSGEAMVMVILGG 263 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 +L A A+++ + + + ++ + L +L H Sbjct: 264 AGTLWGPALGAALVLVLKYVVSSFTDRWLA---------------ILGLTFVLTVLFAPH 308 Query: 338 SLLRL 342 L L Sbjct: 309 GLAGL 313 >gi|239629298|ref|ZP_04672329.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527984|gb|EEQ66985.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 312 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 78/344 (22%), Positives = 144/344 (41%), Gaps = 43/344 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + I + +L+ + +I++ + I I ++ A GL++++G G SL Sbjct: 2 RSKLIWLATMIAGFVLIDIGELTGVINGFIENALVTIGINIILAVGLNLIIGFSGQFSLG 61 Query: 70 CVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ L +L + V +++ +I+G+P+L+ RGDYLAIAT+ Sbjct: 62 HAGFMAIGAYATAIITQNISTPLGFYLAMLVGMIVAIIAALIVGIPTLRLRGDYLAIATM 121 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EI + I+ ITNG AG++ L T + Sbjct: 122 GAAEIIRVIINNL-KITNGPAGMFNIPPLASWPT-------------------------V 155 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++ I++ + A IRD+ A S+ KL+AF + +A + G+ Sbjct: 156 YILMCVTTVIVVNFIHSRAGRAVMAIRDDDIAAESIGINPTKWKLAAFVLGAATAAIGGS 215 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A+ I+P F +I ++ IV+LGG+ S++ A +L + + Sbjct: 216 LHASYLQTIAPGDFGIMNSIALLIIVVLGGVGSITGTFVAAVVLGIIDTVLQNF------ 269 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +AL L+++ + LL S +R Sbjct: 270 ---------GTLRMVIYALALILLMVFKPAGLLGHYELSFKRKR 304 >gi|91224787|ref|ZP_01260047.1| putative high-affinity branched-chain amino acid transport permease protein [Vibrio alginolyticus 12G01] gi|91190333|gb|EAS76602.1| putative high-affinity branched-chain amino acid transport permease protein [Vibrio alginolyticus 12G01] Length = 355 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 126/322 (39%), Gaps = 17/322 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + ++ + Y ++ IQI + A GL+I+VG G +SL + GA+ Sbjct: 31 LAIAGVIAMLAAPLVLDIYFLNLFIQIAYLGIAALGLNILVGFTGQISLGHGAFFGFGAF 90 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L +++ + + IP++ ++ GM+ GLP+ + +G YLAIATL I ++ + Sbjct: 91 ASAWLNNQFNIPVVFAIPLAGYLTMIVGMLFGLPAARIKGLYLAIATLAAQFILEDFFAR 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + G G F +Y+ L Sbjct: 151 ADWFSGGSYGASANPINLFGFAFTTDE---------------SFFYIALFALIFMYMWAS 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ A+ ++RD+ + + + +L +F V + + G+ GA + +S + Sbjct: 196 NLIRSRDGRAFVSVRDHYLSAEIMGINLTKYRLLSFGVCAFYAGIGGALYGHYLGFVSAE 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG--MNFYYFNSLLKFDCSFN 317 F +I ++++I+GG+ S+ T ++ + E+ F F Sbjct: 256 GFTIMMSIQFLAMIIIGGLGSVKGTLMGTIFIVLLPEVLEFGVTGLSAFGDTTAFTDGLA 315 Query: 318 MRHTTLMVIALFLVILMRSHSL 339 + + + L ++ L Sbjct: 316 YFKEMAIGLVIMLFLIFEPQGL 337 >gi|302344562|ref|YP_003809091.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075] gi|301641175|gb|ADK86497.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075] Length = 368 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 130/362 (35%), Gaps = 45/362 (12%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 L++ + L L+L Q ++ M IY A +++ G G Sbjct: 15 PRSLSRRRDVALTLLAGLAGAAALWLVERHGQPFVVHMLTLAAIYATLAVSYNLINGVAG 74 Query: 65 LLSLNCVIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGA 105 SL A GAY +L L + + ++ ++ A Sbjct: 75 QFSLEPNAFVACGAYVTALLTMTPDEKAMTFILEPLIWPFADICLPLPAALLIAGCLTVA 134 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 MG P + RGDYLAI TL E+ + + + +TNG G+ +R Sbjct: 135 LAFAMGFPVFRVRGDYLAIVTLGFGEVIRVVAENAQGLTNGPLGLKGIERQTN------- 187 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 + G+ ++ ++ L ++ A + +R+++ A ++ Sbjct: 188 ------------------LWWSWGLLAVTLIVVGRLVNSSYGRAMKAVREDESAAAAMGV 229 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + + K+ AF S+ F G+AG A I+P F F ++ I++ GG+ S + Sbjct: 230 NVFWHKMLAFCTSAFFEGVAGGLLAHLLTAINPRQFDFLFTFTLLIIIVAGGLGSTTGAV 289 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ E ++ + L+ + + + + L +++ ++ Sbjct: 290 LGAFLVTFGAEYLRFVDQSFTIPLIDYAVPATPGLRMVIFSLLLVGLMIFARRGIMGRAE 349 Query: 345 PS 346 S Sbjct: 350 FS 351 >gi|254462914|ref|ZP_05076330.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2083] gi|206679503|gb|EDZ43990.1| inner-membrane translocator [Rhodobacteraceae bacterium HTCC2083] Length = 402 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 119/346 (34%), Gaps = 30/346 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + +I+ +FA G +I+ G G LS +G+YS V + +++ Sbjct: 39 NAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGVGSYSAVWMFKLLSMNVIPA 98 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK---------------- 139 I +S +++G +++G SL+ G Y +I TL +++ N+ Sbjct: 99 IALSVVVAGLFSLLIGYVSLRRSGIYFSILTLAFAQMSFNLAYSVLTPITNGETGLQLTL 158 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 P G + + + ++ YY+ ++ + + Sbjct: 159 NDPRVLGISQTADGSIPVTGLFGLEMRSTYTMDVGAWAFQFNVGYYLCAVALLVAFYLAI 218 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + R+ R ++ NQ+ L+AF +S + G+AG A+ + Sbjct: 219 RIFRSPFGLMLRAVKSNQQRMNYTGLNTRPYTLAAFVISGMYAGLAGGLMASMDPLAGAE 278 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS---- 315 +++ + V+ + ILGG +L + + +N + F Sbjct: 279 RMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYFENIFSKINDNVLHGWFSFMPDGLEN 338 Query: 316 ---------FNMRHTTLMVIALFLVILMRSHSLL-RLRTPSNFLER 351 + + +V++ L+ + + +R Sbjct: 339 FVITIIHPFIGKGWHLTLGLLFMMVVIFLPGGLVEGGQRIAALFKR 384 >gi|91780288|ref|YP_555495.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692948|gb|ABE36145.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 328 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 67/307 (21%), Positives = 130/307 (42%), Gaps = 27/307 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y+ +G+ L Y + A ++V G +G SL IGAY+ IL +R+G +W Sbjct: 24 DQYLIHLGVLTLFYAVLATSFNLVTGYVGEFSLGHTAFLGIGAYTAAILSTRFGFPMWCT 83 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P++ ++S G+ +G +L+ +G + I TL SE + + W +TNG GI + Sbjct: 84 VPLAGLVSMIGGLAIGAITLRLQGPFFVIVTLAFSEALRLVADNWVAVTNGPMGIAGVPQ 143 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 ++ V +Y++LG+ ++ + +++ A T+R+ Sbjct: 144 PEWITR------------LGNVHATQVFFYIVLGIAIVALYLAYRFVYSSVGRAAVTVRE 191 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ S+ + AF + + G+AG F+A + D+F F +I +V++ Sbjct: 192 NRYVAQSVGIWPFAMAMQAFVLGATLAGVAGGFYAHYISFVGSDVFGFPFMATMIIMVLV 251 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG +L ++ + E TL + + L++L Sbjct: 252 GGKGTLLGPLAGALLVTLLQEYLR---------------EAQELRLTLFGLFVILIVLFL 296 Query: 336 SHSLLRL 342 L+ L Sbjct: 297 PRGLMGL 303 >gi|90421640|ref|YP_530010.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90103654|gb|ABD85691.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 327 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 64/311 (20%), Positives = 118/311 (37%), Gaps = 29/311 (9%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 F+ Y+ ++ +IY +F GL+ +G G S IG Y IL +Y Sbjct: 30 FVAVLIYGGYLLTVMQLAMIYGIFCLGLNFFMGYTGQASFGQNAFACIGGYGSAILSVQY 89 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L + S ++G +++G P+L+ RG YLA+AT + I +I ++W +T G Sbjct: 90 NWEPGLALLASMAVAGVAALLIGYPTLRLRGHYLAMATFALGLITYDITVQWTSLTQGYM 149 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G L TV +++ + I LR + Sbjct: 150 GYAGIPPLGVGSFTVEDERMKLICLGLLLLF--------------AFWISQRLRDSRFGR 195 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 R I ++ +L I KL AF +++ + AG+ FA + ISP++F I+ Sbjct: 196 GLRAIAGSEDGASALGIRISRFKLIAFVIAALYASAAGSLFAHTVGFISPEVFGPQMVIV 255 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 +++ +GG+ ++ + + EL + L Sbjct: 256 TFTMLYVGGVGTMIGPVIGAIVASLLPELFRS---------------TGRFQDIAYALVL 300 Query: 329 FLVILMRSHSL 339 ++++ L Sbjct: 301 LVMLIYAPKGL 311 >gi|315927979|gb|EFV07301.1| branched-chain amino acid transport system / permease component family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 349 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83 Y ++ QI I+++ A +++ G G SL AIGAY+ + Sbjct: 23 PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 82 Query: 84 ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + + S L + V+ + S +I+ + RGDYLAI TL Sbjct: 83 NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 142 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + I + ITNG G+ + Y G+ Sbjct: 143 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 177 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ +IL + + A + IRD++ A ++ + K AF+ S+ G+ G A Sbjct: 178 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 237 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309 +SP F F ++ I++LGG+ S + ++IG E ++ SL Sbjct: 238 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 297 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 S + I L LV+L ++ S+ + Sbjct: 298 NLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 338 >gi|84501717|ref|ZP_00999889.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] gi|84390338|gb|EAQ02897.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] Length = 364 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 125/322 (38%), Gaps = 14/322 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + LL + Y + LI+ + GL + VG G +SL AIGAY+ Sbjct: 25 IAVLLAIMVALPFLVGDYYLAEAANTLIWALAGMGLMVAVGHTGQVSLGHAAFLAIGAYA 84 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L + + PV+ +I+G G I+ +P+++ G YLAIATL + I + ++I Sbjct: 85 DSALMNAGLP-FLVSFPVAGLITGLFGAIIAVPAVRMSGIYLAIATLAVFVIVEEMVILL 143 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +PIT G GI + Y++ L + + Sbjct: 144 EPITGGVGGIMAP------------SVTILGISFDRYAALPNFYWLCLAVVAVVTWGYAN 191 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R+ ++ +RD++ + +L + + AF +SS G+AGA + ++ Sbjct: 192 LMRSPTGRSFLAVRDSEVSARALGINVTRTRALAFGLSSGVTGLAGALMGHYIGFFNYEL 251 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F +I ++ +V +GG+ + ++ V +L + + Sbjct: 252 FSIFISINLLLVVTIGGLGFIQGAFLGAILITAVPQLISILRDNLVGIGIDLS-GIPGLD 310 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T + + L I+ L Sbjct: 311 TMIFSLILIGFIIYEPTGLYGR 332 >gi|239927016|ref|ZP_04683969.1| branched-chain amino acid ABC transport permease [Streptomyces ghanaensis ATCC 14672] gi|291435363|ref|ZP_06574753.1| branched-chain amino acid ABC transport permease [Streptomyces ghanaensis ATCC 14672] gi|291338258|gb|EFE65214.1| branched-chain amino acid ABC transport permease [Streptomyces ghanaensis ATCC 14672] Length = 381 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 130/347 (37%), Gaps = 13/347 (3%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 L + + LLAV L + +G+ + + A GL+++ G Sbjct: 3 DRLPGVLTRRRASIPLLAVALCL------PPFYLDAFWLRIGLFSMAAAIGAIGLALLSG 56 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL--PSLKFRG 119 + G LSL A+GAY Y L G + + + A + + +G Sbjct: 57 TAGQLSLGHAFFLAVGAYGYAYLAGEPGPGLPPALAAPLAVLLAGAAGGLFSPVAGRVKG 116 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 YL IATL + + ++L+ +T G G L G T + Sbjct: 117 IYLGIATLALVFLGHHVLLTADSVTGGFNGRS-VPPLTLGGFTFGADDPHLTVLGVPFGA 175 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 E ++++ LG+ + L R+ A +RD++ A + + + +AF VSS Sbjct: 176 EERLWFLGLGLFAFTWFTARGLLRSRPGRALAALRDSETAAAVMGVDVARHRSAAFVVSS 235 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 + G+AG F A + R+ PD F + ++ ++++++GG+ S++ + + L Sbjct: 236 MYAGLAGVFLALAFRRVVPDYFSLALSVDYLAMIVIGGLGSVAGATAGAVFVTALPLLMT 295 Query: 300 GMNFYY----FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L A+ LV+L L L Sbjct: 296 RYADRLPLVAAPGSTDGAVGPTEAARYLYGAAIVLVLLYAPDGLHGL 342 >gi|298293202|ref|YP_003695141.1| ABC transporter [Starkeya novella DSM 506] gi|296929713|gb|ADH90522.1| ABC transporter related protein [Starkeya novella DSM 506] Length = 609 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 103/313 (32%), Gaps = 29/313 (9%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 F+G Y ++ + L+Y A + ++ G LG+L+ + +A GAY+ ++ + Sbjct: 22 FVGPYVLDTYSVNVLTRSLLYAAVALTVDLLWGFLGILTFGQSVFFACGAYAAGLVFTH- 80 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 ++ + +++ + A A ++ + + +G Sbjct: 81 MDFTEGNALLALGLGVGGALLVAAVIGWLAFWHGASALYASVITLVLPIVATQLLYSGGT 140 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 + L + S+ +F F++ + Y+ + ++ Sbjct: 141 FTGSSSGLSGFMSFDLSMEAWFWLAGGFLVVVTTLAYIFV--------------KSDAGR 186 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 +R+N++ L K+ + +A +AG +A ++P++ F Sbjct: 187 LLIAVRENEQRCKYLGLDTSRLKILVYLACAAIGAVAGYIYAGYAMVVAPELAGFVFGTE 246 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 ++ LGG +L I+ + + ++ Sbjct: 247 LVIWTALGGRGTLLGPVFGALIV--------------DYESAQLAGDYPFVWQLIIGSLF 292 Query: 329 FLVILMRSHSLLR 341 LVI+ LL Sbjct: 293 VLVIIAFPRGLLP 305 >gi|209515366|ref|ZP_03264232.1| ABC transporter related [Burkholderia sp. H160] gi|209504086|gb|EEA04076.1| ABC transporter related [Burkholderia sp. H160] Length = 883 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 115/333 (34%), Gaps = 34/333 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L+L + QI IY ++A G + ++G LGL+ + + Sbjct: 30 VIVMALVLIAGSALALAIGLPIDRITQIAIYTLYAAGTNFLIGYLGLVPFGASFFFGCAS 89 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ I + +G + + + S +++G L+ +G Y ++ TL S+I I Sbjct: 90 YALAIASAAWGGNEITGVLIGMGFSLLLALVIGALILRRKGLYFSLLTLACSQIAFEIAY 149 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 KW +T G+ G+ R F + + L + + ++ Sbjct: 150 KWTSVTGGENGMQNVARPLFPSA-------------------LSFHAFTLVVVLAATWLL 190 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + +RDN++ SL + +L A ++ IG+AG A + Sbjct: 191 WRIAHAPFGRLMQALRDNEQRVTSLGYDVYTTRLIALIIAGGVIGVAGGLMALLLQGVYA 250 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +S + + +LGG+ + I + + + ++ Sbjct: 251 NNLNWSHAGDPVLMAVLGGIHQFLGPLWGAVVFIVLEDRLSAITENWW------------ 298 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + ++ L+ + R Sbjct: 299 ---LFFAPVIIIMALLSPEGIQGFWQRFGKRPR 328 >gi|119716343|ref|YP_923308.1| inner-membrane translocator [Nocardioides sp. JS614] gi|119537004|gb|ABL81621.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Nocardioides sp. JS614] Length = 376 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 66/330 (20%), Positives = 116/330 (35%), Gaps = 20/330 (6%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + LLA V L + IY + L++++G G +SL Sbjct: 33 RGTVWALLAWVVLAYPVNALSPFHVGVADIDIASLAAIYAIGGLSLNVLLGYCGQISLGH 92 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 IGA++ + + GLS WL + +A+ G +++G SL+ G Y A+ TL Sbjct: 93 QAFVGIGAFASAYIVTNLGLSFWLAVAAAAVFGGLQAVLLGAVSLRLTGLYFALVTLAYG 152 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 Q L IT G+ G F Y++ LG Sbjct: 153 TFAQETLFGITAITGGEGGKPAPRPELF-------------------ASGYRFYFLCLGF 193 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L + L + A +R+N + S + L AFAVS F G+AG+ A Sbjct: 194 LALVLWLDWRLTSSKAGRAMAALRENPRVAASYGIAVRSYILLAFAVSGIFAGIAGSLIA 253 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + I F F ++ + + ++GG+ + + + + E + Sbjct: 254 HHDEVIVGSSFDFRLALLFVLMTVVGGLRNRVGVVIGSVFFALLEEGALVSMLHLGGFFE 313 Query: 311 KFDCSFNMRHTTLMV-IALFLVILMRSHSL 339 + ++ I L L + + + Sbjct: 314 GTLGLPTEFVSLVVGPILLVLTLTLYPGGI 343 >gi|258405259|ref|YP_003198001.1| inner-membrane translocator [Desulfohalobium retbaense DSM 5692] gi|257797486|gb|ACV68423.1| inner-membrane translocator [Desulfohalobium retbaense DSM 5692] Length = 298 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 37/307 (12%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-SIWLL 95 YI + + +YV+ A L+I VG G +SL + IGAY +L Y + LL Sbjct: 3 AYILHLAVLGGMYVLLAASLNIPVGLSGQVSLGHGAFFGIGAYISGLLAMHYTIVPFPLL 62 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + ++ + S A +++ P+LK + +YLA+ TL IF+ L T G G+Y Sbjct: 63 LVLAGLGSAAVAVLLSPPALKLKDEYLAVVTLGFGLIFELGLKNLA-FTGGTDGLYGLPN 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 G + + G L + LR+ I++ Sbjct: 122 FGMQGADF--------------------LWWVWGAVTLCLFVTSRLRKGQFGRNLTAIKE 161 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + K+ FA+S+ F G+AG+ +A I+P +F +I+++ +V+L Sbjct: 162 SERTARTLGIAPLPLKVGCFALSALFAGIAGSLYAHYITFINPGVFGLHTSILLLCMVVL 221 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM ++ +L + EL Y + L ++++ R Sbjct: 222 GGMGTVLGPLAGGILLFLLPELLQEFADY---------------QDLVYGGLLIVILIFR 266 Query: 336 SHSLLRL 342 LL Sbjct: 267 PQGLLGR 273 >gi|170738253|ref|YP_001779513.1| ABC transporter related [Burkholderia cenocepacia MC0-3] gi|169820441|gb|ACA95023.1| ABC transporter related [Burkholderia cenocepacia MC0-3] Length = 616 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 105/336 (31%), Gaps = 29/336 (8%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + L VV + L G Y+ ++ IQ + + A + ++ G G L Sbjct: 21 RAPRAHAWRGLAIVVAVAAVLLVAGPFVFGSYLLNVLIQAFFFSIVAVTVDLLWGYTGYL 80 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + + IGAY+ ++ + G S + A + + + Sbjct: 81 TFGQSAFFGIGAYAAGLVFTHGGFSAPHALFAIGAALAATAAVAAVFGWLSFYRGASPFF 140 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + I++ ++ G+ +F + Y + Sbjct: 141 ATVMSLVLPIVLTQSLLSGGE---------------WTGSSSGLTGFETFDLSLGQWYGI 185 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + A + R+ IRDN+ L K+ ++ G+AG Sbjct: 186 AGAALLVVAVLAWVFVRSDGGRLLVAIRDNEARCAYLGINTSIVKIVLLVATAMIAGLAG 245 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + A ++P++ F ++ V LGG +L + ++ G Sbjct: 246 FGYGAFSGVVAPELSGFLLGTQLVVWVALGGRGTLWGPVLGSVLINVATAYLSG------ 299 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 S ++ A +VI++ L+ L Sbjct: 300 --------SMPFAWQLILGAAFVVVIVLLPKGLVPL 327 >gi|126464303|ref|YP_001045416.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] gi|126106114|gb|ABN78644.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] Length = 331 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 128/330 (38%), Gaps = 29/330 (8%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 +L + L L A + Y+ + I+ A +++G G LSL Sbjct: 6 LLRVTVAAVALFLVAVTLALRLDDYLLYVVTLGAIFATLAVSFDVLLGYTGYLSLAHGAL 65 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 + +GAY+ IL + +G W +P + +++GA G ++ L + + RG Y A+ TL + I Sbjct: 66 FGVGAYACGILTAHHGWPFWAALPAAGLVAGAAGAVIALLAFRTRGLYFAVLTLGIGLIG 125 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + +T G G + + ++ F+ L Sbjct: 126 HQLFLVLAGLTGGVGGFVGIPSPGRPDWVPLDQNGWNALLALALLLATFLAAQLFV---- 181 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 R+ + A +R++ +L + A+L+AF S+ F G AGA FAA Sbjct: 182 ---------RSRLGAACLAVREDLTLAQALGIRVGQARLAAFVFSAIFTGFAGALFAAIS 232 Query: 254 DRISPDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P+ F ++++V++GGM +L A+L + E + Y Sbjct: 233 NFVAPESFTVLGAGFQLVALVVVGGMGTLWGPILGAALLTALPEALRVASGY-------- 284 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L + ++ L L Sbjct: 285 -------SLIAYGVLLLVFVIFAPRGLASL 307 >gi|254477598|ref|ZP_05090984.1| inner-membrane translocator [Ruegeria sp. R11] gi|214031841|gb|EEB72676.1| inner-membrane translocator [Ruegeria sp. R11] Length = 327 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 110/310 (35%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 AV+ LL + ++ ++ ++ I + GL+I +G GL+SL + IG Sbjct: 10 AVILLLLAIPLWAHMAEEPFLITLATKVAILALAGVGLNIALGIGGLVSLGHAAFFGIGG 69 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL + L + ++ L ++ + + I Sbjct: 70 YAMGILAAHAQNYEPLAEWPMLIEGTNQMPVIWLVAVVASALAALVIGALSLRTSGVYFI 129 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + G S+ FP + + + + + + Sbjct: 130 MITLAFGQMLYYFAISWTAYGGEDGLSIWVRNEFPGLNTLVPLEFFLICYVILCAALWFA 189 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R A R + ++ T +L+AF +S A G+AGA FA +SP Sbjct: 190 ARLARAPFGLALSAARQCEARVETVGITPYQLRLTAFVISGAITGLAGALFADLNRFVSP 249 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 M + + ++ VI+GG+ L A+ I + L G++ Y+ L + Sbjct: 250 TMLSWHTSGEIMIFVIIGGVGRLFGPVIGAALFILLEHLLGGISDYWQIYLGGLLLIIVL 309 Query: 319 RHTTLMVIAL 328 ++ A+ Sbjct: 310 YARGGVIGAI 319 >gi|163736524|ref|ZP_02143943.1| hypothetical protein RGBS107_15371 [Phaeobacter gallaeciensis BS107] gi|161390394|gb|EDQ14744.1| hypothetical protein RGBS107_15371 [Phaeobacter gallaeciensis BS107] Length = 327 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 111/314 (35%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L AV+ LL + ++ ++ ++ I + GL+I +G GL+SL + Sbjct: 6 LLNAAVILLLLAIPLWAHMTEEPFLITLATKVAILALAGVGLNIALGIGGLVSLGHAAFF 65 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y+ IL + L + ++ L ++ + + Sbjct: 66 GIGGYAMGILAAHAQNYEPLAEWPLLIEGTNQMPVIWLVAVVASALAALVIGALSLRTSG 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + G S+ FP + + + + + + Sbjct: 126 VYFIMITLAFGQMLYYFAISWSAYGGEDGLSIWVRNEFPGMNTLAPLQFFLICYAILCAA 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L R A R + ++ T +L+AF +S A G+AGA FA Sbjct: 186 LWFAARLARAPFGLALSAARQCEARVETVGITPYQLRLTAFVISGAITGLAGALFADLNR 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP M + + ++ VI+GG+ L A+ I + L G++ Y+ L Sbjct: 246 FVSPTMLSWHTSGEIMIFVIIGGVGRLFGPVIGAALFILLEHLLGGISDYWQIYLGGLLL 305 Query: 315 SFNMRHTTLMVIAL 328 + ++ A+ Sbjct: 306 IIVLYARGGVIGAI 319 >gi|159037419|ref|YP_001536672.1| inner-membrane translocator [Salinispora arenicola CNS-205] gi|157916254|gb|ABV97681.1| inner-membrane translocator [Salinispora arenicola CNS-205] Length = 338 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 121/321 (37%), Gaps = 29/321 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L++ L + ++ + IL + +FA + +++G GLLS + + AY Sbjct: 33 ALLVVGLAVALWLPNGLYPAVAVDILCWALFAVAVDLLLGFTGLLSFGHAAFWGVSAYVT 92 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 ++ GL + A + + +G +++ G Y A+ TL +++ + +W+ Sbjct: 93 GLVAIHLGLPFPAAVLAGAFAAAVLAVPIGYLAVRRTGIYFAMVTLAFAQLVYYVANEWR 152 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G+ G+ R + + + YY +L + L + + Sbjct: 153 SVTQGENGLQGVPRE---------------LFGLDLTDDYYFYYAILPIVLLGLAGAWRI 197 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + IRDN +L + KL+ F +S G+ G FA S +S ++ Sbjct: 198 VHSPFGRVLVGIRDNPARARALGYPVHRYKLTIFVLSGFVAGLGGGLFAVSHRFVSLEVL 257 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 ++ + + +V+LGG+ +L I++ + + F Sbjct: 258 HWTTSGKAVIVVVLGGIGTLWGGVLGAGIVVRLEDWLSFSGFEAIG-------------- 303 Query: 322 TLMVIALFLVILMRSHSLLRL 342 + LV+L+ + Sbjct: 304 LVTGGLFVLVVLLFRRGIWGT 324 >gi|170701815|ref|ZP_02892747.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|170133265|gb|EDT01661.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] Length = 603 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 33/324 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V ++ L + Y+ +Y + A L++V G++G +SL IGA Sbjct: 312 VLVVLIVAAAVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L S G S + IP + +I+ G ++ P+ + RG Y++IATL + E+ +++ Sbjct: 372 YASALLSSDLGWSPAVTIPCAGVITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI L + Y+ + + A + Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQ 473 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L R+ + R +R++ A + K AFAV G++G A I+ Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F +I+ +++VILGG+ ++ LIG+ EL Y Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIAGAIALIGLPELFRWAADY-------------- 579 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + L L++ R LL Sbjct: 580 -RMLIYGVVLLLLVRFRPQGLLGT 602 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 106/305 (34%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R GL + + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRLGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVVIGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +A + +LR T + A R + Sbjct: 126 PDWH-----------LRIAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280 Query: 337 HSLLR 341 + L Sbjct: 281 NGLFS 285 >gi|83950606|ref|ZP_00959339.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83838505|gb|EAP77801.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 358 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++Y L+ + F F+ + +++++ + LIY + A GL+I+ G Sbjct: 20 FPIKFDRYRYYAVLI------IGFAFIPFVINDYWVNAIFLPFLIYSIAAIGLNILTGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + +SI + + ++ I+ G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPEVSILIHVLLAGGITAGVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERTMFGVPVTGPETAAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L + A I L R + W IRD A + + AKLSAFAVSS F+ Sbjct: 185 AYLFCLVLTVFCALIARNLTRGMMGRKWMAIRDMDIAAEIIGVNPLMAKLSAFAVSSFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA F A + F +++ +V+ +VI+GG+ S+ A L+ + + Sbjct: 245 GVAGALFFAVYLGAVEVGEAFGITKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVVLKL 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + ++ + L +++ H L +L Sbjct: 305 VGVDLLGWPTDL---VAHLQLIIVGALIVLFLIVEPHGLAQLWR 345 >gi|319792784|ref|YP_004154424.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315595247|gb|ADU36313.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 345 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 74/322 (22%), Positives = 133/322 (41%), Gaps = 17/322 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L L + Y + + I V A GL+I+ G GL+SL +GA Sbjct: 24 MWLAIGAALLVLFPFMASDYWLYLACLVAINVASATGLNILTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ I+ +R G L I +++ G+I+G+PSL+ +G YLAIAT+ S I + Sbjct: 84 YTVAIMQTRLGTPFLLNIAAGGVVAMLGGLIVGIPSLRVKGLYLAIATIAASFITHFLFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G GI + + +Y+V++ + L Sbjct: 144 NL-KLTGGTTGISLPPAQ---------------LFGLPLDTSFRLYWVIVPVMLLMVLGA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT + A+ IRD + L ++ KL +F +SS + G+AG +A ++P Sbjct: 188 ANLFRTRVGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++ +I+GGM ++ + V EL + ++ + Sbjct: 248 ESFPLLMSIFFLAAIIVGGMGTILGGIFGAVFMTMVPELLKLIVD-LLPGGVEMTVFLSP 306 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 T + + + ++ H L Sbjct: 307 VRTVVFGLLIVGFLVFEPHGLA 328 >gi|225174721|ref|ZP_03728719.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1] gi|225169848|gb|EEG78644.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1] Length = 358 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 122/305 (40%), Gaps = 35/305 (11%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 Y+ + I+ ++A ++ G G +S + + + AY+ +L G+ + + Sbjct: 43 DSSYLLRVITLTSIFTIYAASWDLLGGFTGQISFGHALFFGVAAYTSALLNLHLGMPVLI 102 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 IP+ A+ + G+++GLP L+ +G Y ++A+L I I+ + +T G+ GI Sbjct: 103 TIPLGALAAVLSGLVLGLPGLRLKGPYFSLASLAFPIIMMGIVFTFPQLTGGELGISGIT 162 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 RL + YY+ L + + + + + I + IR Sbjct: 163 RL--------------------AETRLAEYYLSLIIMLIIVLAMWKIVTSKIGLIFHAIR 202 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 +++ + K+ AF +S F G+AG +A + P + ++ +I VI Sbjct: 203 EDEITVRASGINTSLYKMLAFIISGLFAGVAGGMYAHFMRVVGPSTLELIMSLQIIVWVI 262 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 GG+ ++ A IL ++E + Y + + + LV+ + Sbjct: 263 FGGIATIYGSAVGVFILFPLMEYLRVVPEY---------------RMLIFALIVILVLRI 307 Query: 335 RSHSL 339 + Sbjct: 308 MPEGI 312 >gi|90417899|ref|ZP_01225811.1| putative permease protein, ABC-type branched chain amino acid transporter transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337571|gb|EAS51222.1| putative permease protein, ABC-type branched chain amino acid transporter transporter [Aurantimonas manganoxydans SI85-9A1] Length = 353 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 65/309 (21%), Positives = 130/309 (42%), Gaps = 16/309 (5%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y+ S I I IY + A GL+++ G G +SL + GA++ + S+ Sbjct: 44 PLVFGGYVLSQMILIGIYGIAALGLNVLTGMTGQISLGHGAFFGFGAFASAWIASKGIP- 102 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + IP++ +++ A GMI G+P+ + +G YLAIATL I ++ + T G G Sbjct: 103 VLIAIPLAGLMTTAVGMIFGIPAARLKGLYLAIATLASQFILEDFFGRAAWFTGGPYG-- 160 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 SL + + +Y++L + + L RT A Sbjct: 161 -------------SLAETATLFGFPLNTDERYFYLVLFWVVICFLAVANLARTRDGRALV 207 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RD+ + + + ++ +F +SS F G+ GA + +S + F +I ++ Sbjct: 208 AVRDHYLSAEIMGINLTRYRIMSFGISSFFAGIGGALYGHYLGFVSGEGFTILLSIEFLA 267 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 ++I+GG+ S+S A ++ + ++ + + A+ L Sbjct: 268 MIIIGGLGSVSGSLLGAAFILLLPQVMEIFANGLADVFPAIAQGTAYIKQMSVGAAIILF 327 Query: 332 ILMRSHSLL 340 +++ L+ Sbjct: 328 LVLEPEGLV 336 >gi|269793004|ref|YP_003317908.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100639|gb|ACZ19626.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] Length = 293 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 83/306 (27%), Positives = 137/306 (44%), Gaps = 32/306 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y S+ I I + A GL+++VG G +SL + IGAY+ +L + WL Sbjct: 2 NDYAVSVATIIAIQAIGALGLNVIVGYAGQISLGHAAFFGIGAYACAMLTTNGLS-FWLA 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +PV ISG+ G ++GLPS++ + D+LAI T+ ++ I + I + + P G GI R Sbjct: 61 LPVVLAISGSVGALLGLPSIRLKEDFLAITTIGINFIVEAIFL-YTPFFGGALGIGGIPR 119 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + FLG ++ + ++ L S LW RR+ + IR+ Sbjct: 120 VVFLGEKLKG---------------VGFLWLCLAFLGASVLGCLWFRRSWLGLGCFAIRE 164 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A S+ + KLSAF V + ++GA +A ISP F F +++ +S+V+L Sbjct: 165 DETAAASMGIWPMKFKLSAFVVGAKLAALSGALYAHYMRFISPGDFGFPVSVMFLSMVVL 224 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM +L +L + E+ + Y L L +I + Sbjct: 225 GGMGTLWGPVVGAVVLGILPEVFRPIMEY---------------RMLLYGALLLGMIRFQ 269 Query: 336 SHSLLR 341 LL Sbjct: 270 PGGLLG 275 >gi|170289454|ref|YP_001739692.1| inner-membrane translocator [Thermotoga sp. RQ2] gi|170176957|gb|ACB10009.1| inner-membrane translocator [Thermotoga sp. RQ2] Length = 358 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 62/361 (17%), Positives = 129/361 (35%), Gaps = 47/361 (13%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 +L+ + + + + L L+L Y + I IY + A L+++ G G+ Sbjct: 6 KLSARTNFILTVVFLIFVALLLYLADRYMDSYKLRVVRLIAIYGIMAVSLNLINGITGIF 65 Query: 67 SLNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACG 107 SL IGAY+ + + + +++ Sbjct: 66 SLGHAGFILIGAYTASLLTLSPEQKAMSFIIEPIVPWLANAHTDFFTATVAGGVLAAVFA 125 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 +G P L+ GDYLAIA+L +E+ + I + ITNG G+ Sbjct: 126 FFIGWPVLRLSGDYLAIASLGFAEVIRIIALNAISITNGPLGLKGIP------------- 172 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 E + G F++ + L ++ A + IR+++ A ++ + Sbjct: 173 ------------EYSNIWWCYGWLFVTVLFMASLVNSSYGRALKAIREDRIAAEAMGINV 220 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIA 285 +L +F + + F G++G+ +A I P V+ +++LGG+ S+S Sbjct: 221 FKHQLLSFVIGAFFAGVSGSLYAHWLTTIDPRTTTLGPMLTFYVLIMIVLGGLGSISGSL 280 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 A+ + E + + + ++ LV++ ++ Sbjct: 281 IGAALFAILFEWLRDLEEPFTFFGIHVP-GIKGMRILVISAIFILVMIFWQRGIMGREEL 339 Query: 346 S 346 + Sbjct: 340 T 340 >gi|330505117|ref|YP_004381986.1| ABC transporter-like protein [Pseudomonas mendocina NK-01] gi|328919403|gb|AEB60234.1| ABC transporter related protein [Pseudomonas mendocina NK-01] Length = 599 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 118/337 (35%), Gaps = 31/337 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L+ L + Y ++ I +Y + GL ++ G G+ S +GAY Sbjct: 6 LILALVAVLAVAPAVLPPYYVTLLNYIGLYTLVVLGLVLLTGVGGMTSFGQAAFVGLGAY 65 Query: 80 SYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + + S WL + V ++ +++G +LK G YL + T+ Sbjct: 66 TSAYLTTVQDLPSWLAWASASPWLTLLVGLALTAIVALVLGALTLKLSGHYLPLGTIAWG 125 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + + + G G+ + G + + +YY++ + Sbjct: 126 LSLYYLFGTLESL-GGHTGVSGLPSISLFGWALDKGEK--------------IYYLIWAI 170 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + I L + A R ++ Q S+ K+ F +S+ F ++G +A Sbjct: 171 LLGAMLITQNLLDSREGRAIRALKGGQLMAESMGVNTFRTKMVIFLISALFAALSGWLYA 230 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 ++ ++P F I + + ++GG+ S+ +L + + + + Sbjct: 231 HTQRFVNPTPFGLHMGIEYLFMALIGGVASVWGALLGAGVLTMLKQWLQDLLPQLLGN-- 288 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + IA+ L++ L L T Sbjct: 289 -----TGNYEVIVFGIAIVLLMQRAPGGLWPLLTRLL 320 >gi|283455041|ref|YP_003359605.1| branched-chain amino acid AbC transporter permease [Bifidobacterium dentium Bd1] gi|283101675|gb|ADB08781.1| branched-chain amino acid ABC transport system permease component [Bifidobacterium dentium Bd1] Length = 469 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 97/305 (31%), Gaps = 28/305 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I L+ + + G+++V G+ GL S + +G + + + + +I Sbjct: 189 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAYVGTQMLHMPVVASAIFAIVI 248 Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 G+I R + +I++ L G + Sbjct: 249 GAITGLIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 301 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 F + ++ L + + L+L +T + A R + DN Sbjct: 302 -----KSVPDSFQLGPITTDMPTLLSALIAICVIIGVTLFLYKTRLGRATRAVSDNAALA 356 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + + +S + ++G + IS + + +++ + V LGG+ + Sbjct: 357 AASGINVDQVVRVVWILSCSMAALSGVLLGIYLNGISWNT-GATLILLMFAAVTLGGLGT 415 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + ++ V ++ + N + L +V+L+R + Sbjct: 416 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 462 Query: 341 RLRTP 345 + Sbjct: 463 GKQQR 467 >gi|239820626|ref|YP_002947811.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239805479|gb|ACS22545.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 341 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 61/318 (19%), Positives = 113/318 (35%), Gaps = 24/318 (7%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y ++ I+ + GL+++ G G +L AIGAY+ IL + W Sbjct: 21 TDNDYHLTVMSSAYIFALATLGLNLITGYTGQFNLAHAGFMAIGAYTVGILTVDHQWPFW 80 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 +S ++ G+ +GL SL+ +G + AI T+ M I + KW+ +T+G GI Sbjct: 81 AAFCLSGLVPVVLGLPIGLLSLRLKGHFFAIFTMCMGYILFLGIEKWESLTHGAVGIIGI 140 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T +YY++LG L ++ + + + + I Sbjct: 141 PVPEALPTPFGD---------VSFDSPRALYYLVLGFLTLGLWVMHRIVGSLLGRTFVAI 191 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+ SL ++ KL AF +S + G AG +A +SPD+ + + Sbjct: 192 RNGDDLAESLGINLMRNKLLAFLLSVFYAGTAGGLYAGFVRFLSPDLAGVERTFDMTMYM 251 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 I L + L ++ + L ++++ Sbjct: 252 ---------------LIGGAGTLLGPLLGALGVPWLAQYLQFLQDYRFIVFGPLLIVLVI 296 Query: 334 MRSHSLLRLRTPSNFLER 351 ++ R Sbjct: 297 FLPDGIVGWVRGQWLRRR 314 >gi|116249072|ref|YP_764913.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253722|emb|CAK12115.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 328 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 72/311 (23%), Positives = 123/311 (39%), Gaps = 25/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 +YI I LI+++ A GL+++VG GLLSL + IGAY+ +L YG Sbjct: 31 PFIGSRYITHSLIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAYTAGLLAVTYGTP 90 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 ++ + + +SGA + +G+P+L+ R + TL I Q I W +T G G+ Sbjct: 91 FYVNLIAAGAVSGALALPLGIPALRLRSTSFVMCTLGFVIIGQAIAKNWVSLTRGDMGLS 150 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + YF S V YY+ L + L+ + + R+ Sbjct: 151 SIPKPYFEL----------GPLSFTVSGTTNFYYLALIIGTLATFAVWAIVRSPAGRNMV 200 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IR+N+ SL KL F +S+ F G+ G +A +SP F+ + ++ Sbjct: 201 AIRENETLAESLGVPTWHYKLIVFMISAVFAGVGGCLYAYYLTVVSPLTFQMYYSTTMLI 260 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 IV+ GG +S + + +G+ E + L ++ Sbjct: 261 IVLGGGAGMISGTVFGSLLFVGLTEALR---------------ITPELRMIAYGVCLLVL 305 Query: 332 ILMRSHSLLRL 342 + L Sbjct: 306 VFWFKKGCAPL 316 >gi|307265576|ref|ZP_07547130.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1] gi|306919374|gb|EFN49594.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1] Length = 331 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 135/323 (41%), Gaps = 30/323 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V L+ L + + LIY + A GL++++G G +SL A+GAY Sbjct: 10 IVLILIATLIPPILNLPGSLQYLLDLSLIYAIVAIGLNLLMGYAGQISLGHGAFLAVGAY 69 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L + ++ + +S +I+G G+++GLP+LK +YLAIATL I Sbjct: 70 TSAYLTLTLHVPFFIALILSGLITGIVGILLGLPALKLERNYLAIATLGFGVAVTQIFAI 129 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W T G +GI F + YY++L + + + Sbjct: 130 WTNFTGGFSGIKPLRPELFGFKF---------------NSYLSYYYIILILTIVLVILTW 174 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + RT + + +RD++ A ++ + + K AF +S+ + G+AG+ +A ++P Sbjct: 175 NIIRTKVGRSLMAMRDSEIAAKAMGINVSYYKTLAFGLSAFYTGIAGSLYAHLLGFMTPY 234 Query: 260 MF--KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + ++ ++++++GG+ ++S I+ + ++ + Sbjct: 235 DYAFSIGMSLNFLAMIVIGGIGTISGSIIGAIIMTWLPQITSNL-------------PIK 281 Query: 318 MRHTTLMVIALFLVILMRSHSLL 340 + + V++ + + Sbjct: 282 SLSQIITGAIIIAVVIFYPNGIA 304 >gi|304438255|ref|ZP_07398196.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368621|gb|EFM22305.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 316 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 126/327 (38%), Gaps = 41/327 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + A++ ++ A + I I ++ A L+++ G G SL Sbjct: 11 MLVFALIIYAVIMGLTSAGMLNAFWQLNLIFAGINIILAASLNLINGYTGQFSLGHAGFM 70 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AIGAY V+L + + L + +G G ++GLP+L+ RGDYLAIATL + EI + Sbjct: 71 AIGAYVGVVLTTNFHLPFAAALLAGGAAAGLLGALIGLPTLRLRGDYLAIATLGLGEIVR 130 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I+I + G AG L + + + Sbjct: 131 IIIINVPYV-GGAAGFKGIPHLTNFT-------------------------WVFFLMLAT 164 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 II + A IR+N+ A S+ K+ AF + + F G+AG F + Sbjct: 165 LCIIKNFVNSRHGRACLAIRENEIAAESMGINTTKYKVLAFTIGAFFAGVAGCLFGHNMY 224 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP F F ++ ++ +V++GG+ S++ ++ + Sbjct: 225 ILSPASFTFMQSFNILIMVVMGGLGSMTGSIAGALVVTFLSAALASF------------- 271 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + +AL L++ R L Sbjct: 272 --PNARMIIYALALILLMFYRPQGLFG 296 >gi|86151141|ref|ZP_01069357.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315124507|ref|YP_004066511.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85842311|gb|EAQ59557.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315018229|gb|ADT66322.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 350 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83 Y ++ QI I+++ A +++ G G SL AIGAY+ + Sbjct: 24 PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 83 Query: 84 ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + + S L + V+ + S +I+ + RGDYLAI TL Sbjct: 84 NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + I + ITNG G+ + Y G+ Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ +IL + + A + IRD++ A ++ + K AF+ S+ G+ G A Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309 +SP F F ++ I++LGG+ S + ++IG E ++ SL Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 S + I L LV+L ++ S+ + Sbjct: 299 NLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339 >gi|77406653|ref|ZP_00783696.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77411403|ref|ZP_00787750.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77162576|gb|EAO73540.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77174725|gb|EAO77551.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 317 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 78/335 (23%), Positives = 140/335 (41%), Gaps = 42/335 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + V+ LL+ + + Y + I I V+ A GL+++VG G SL Sbjct: 11 WLAIVVLGYLLISVLISMGIFNLYHIQIIETIGINVILAVGLNLIVGCSGQFSLGHAGFM 70 Query: 75 AIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 AIGAY+ I+G + + I V +++G + +G+P+L+ +GDYLAIATL ++EI Sbjct: 71 AIGAYAVAIIGVKMPTYVGFLIAILVGTLVAGGIALGVGIPTLRLKGDYLAIATLGVAEI 130 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +L+ ITNG AGI + ++ G+ Sbjct: 131 IRILLVNGGDITNGAAGIMGIPPFT-------------------------TWSLVYGVAV 165 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 +S + + R+ + IR+++ A S+ K+ F + +AG+ A Sbjct: 166 VSLILAMNFLRSPLGRNTIAIREDEIAAESMGVDTTKVKVIVFIFGAILASIAGSLQAGY 225 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + P F F ++ V+ IV+LGG+ S++ A +L + L Sbjct: 226 VGTVMPKDFSFMMSVNVLIIVVLGGLGSMTGTVLAAILLGLLNMLLQDY----------- 274 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL L+++ R LL + + Sbjct: 275 ----ASVRMIIYALALILIMIFRPSGLLGTKELTL 305 >gi|27378466|ref|NP_769995.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351614|dbj|BAC48620.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 348 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 59/338 (17%), Positives = 123/338 (36%), Gaps = 35/338 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + + + Y+ + I I+V+ A L++++G G LSL + + I Sbjct: 3 IALTILAVAALASVPLWLRDPYLLNALITTGIFVIGAMSLNLLLGFTGQLSLGHIAFFGI 62 Query: 77 GAYSYVILG-------------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 GAY + + ++ +I+G CG +GL S + RG Y Sbjct: 63 GAYVSALTSLGFDIGLPGDLRLVHTPWPPIVGFVLAILIAGLCGYFVGLLSFRVRGAYFV 122 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 I T+ +E+ + + + W +T G + + + + ++ Sbjct: 123 IVTISFAEVVRLVALNWVELTQGPLALTNIPSIA---------LPLPGLSELTLRTKMQN 173 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 YY++L + ++ +I L + A R + +N+ S+ + A +S+A G Sbjct: 174 YYLVLVVALIAYLLIARLVHSHFGRAMRGLMENETLAVSVGIDVTKTLTLAAVISAAIAG 233 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 AG+ +A I P++F F + ++ +VI GG SL+ I + Sbjct: 234 AAGSLYAHYIRIIDPEVFAFINTVTMVIMVISGGKGSLAGPVVGGLIFGLLPVALR---- 289 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L ++ + ++ Sbjct: 290 ---------PIMAPEAQWIAYGGVLIAILFVLPRGIVP 318 >gi|99081354|ref|YP_613508.1| inner-membrane translocator [Ruegeria sp. TM1040] gi|99037634|gb|ABF64246.1| inner-membrane translocator [Ruegeria sp. TM1040] Length = 399 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 127/363 (34%), Gaps = 32/363 (8%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLL 66 K I+ +L + P +L F + ++ + + +I+ +FA G +I+ G G L Sbjct: 10 KLLMIVAVLTMFAPFILNPFPVDSAMAQFNAGYPDLMQRFVIFGVFAIGFNILFGLTGYL 69 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S +G+Y+ V + +++ I +S ++SG +++G SL+ G Y +I T Sbjct: 70 SFGHAAFLGVGSYAAVWMFKLLSMNVLPAIVLSVLVSGLFSLVIGFVSLRRSGIYFSILT 129 Query: 127 LIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 L +++ + P G + + + Sbjct: 130 LAFAQMMFALAYSVLTPITGGETGLQLALDDPRILGASQTAEGNIPVPSLFGLEMRDSAE 189 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 + F YY + S + + + R+ R ++ NQ+ Sbjct: 190 LVIGGWSFTFNFGYYFCALVMLASFYLAIRIFRSPFGMMLRAVKSNQQRMNYTGLNSRPY 249 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 L+AF +S + G+AG A+ + +++ + V+ + ILGG +L Sbjct: 250 MLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGF 309 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLVILMRSH 337 + + +N +S F + I LV++ Sbjct: 310 IKYFENIFSKINDNVLHSWFSFLPDGLEDFVVFIIHPFIGKGWHLTLGILFMLVVIYLPG 369 Query: 338 SLL 340 L+ Sbjct: 370 GLV 372 >gi|212697512|ref|ZP_03305640.1| hypothetical protein ANHYDRO_02082 [Anaerococcus hydrogenalis DSM 7454] gi|212675511|gb|EEB35118.1| hypothetical protein ANHYDRO_02082 [Anaerococcus hydrogenalis DSM 7454] Length = 330 Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 71/334 (21%), Positives = 139/334 (41%), Gaps = 45/334 (13%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++ ++ + + Y S+ + I ++ + L+I VG+LG ++L +IG Sbjct: 25 LVLISFAIIQILISVGIIDSYWQSIIFLLCINIILSVSLNITVGNLGQITLGHAGFMSIG 84 Query: 78 AYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 AYS I + L ++ + + + + + +G+P L+ GDYLAI TL EI Sbjct: 85 AYSAAIFLKTGLVQGILGFFIALIIGGLFAFLFSLAIGVPVLRLNGDYLAIVTLAFGEII 144 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + ++ IT G G+ I + ++ + L Sbjct: 145 RVVVENL-SITGGAQGMSGIP-------------------------TIDSFGLIFFVTVL 178 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 S + + + A I+DN+ A S +K+ AF +S+ F G+AGA +A + Sbjct: 179 SVVFMYSIMTSRFGRAVLAIKDNELAAESCGINTTKSKIFAFTLSALFAGVAGAIYAQTT 238 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I+ ++F ++++ ++ +V+LGGM + +T +L V E+ Y Sbjct: 239 GVIAANVFNYNKSFDILVMVVLGGMGFFTGSIISTIVLTVVPEILRAFAEY--------- 289 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +V++ R L+ S Sbjct: 290 ------RMIIYSVILVIVMIFRPQGLMGREEFSI 317 >gi|282856337|ref|ZP_06265617.1| inner-membrane translocator [Pyramidobacter piscolens W5455] gi|282585840|gb|EFB91128.1| inner-membrane translocator [Pyramidobacter piscolens W5455] Length = 308 Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 40/309 (12%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y++ + + + I ++ A G+S++ G G+ +L A+GAY+ IL Y + Sbjct: 24 DYYMEGILMLLCINMIAAMGVSLLTGFTGIFTLGHAAYMAMGAYTAAILIMNYDVPWLPS 83 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +++ A ++G+P++K GDY AIA+L + E + ++ W+ +T G GI D Sbjct: 84 VLAGGVLAAALAWVVGVPTMKLTGDYYAIASLGLCEAIRLVIENWQSVTRGARGIPGIDP 143 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 V + A + L + +R RD Sbjct: 144 YTTR-------------------------AVAVWFFAALALFMFNLIYSRWGRYFRACRD 178 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 A L +L + +S+ + G+AGA I P MF ++ + S+V+ Sbjct: 179 GVTAASLLGFNTPSIRLVSLLISAFYCGIAGALLGGYLSFIQPAMFDMMKSTELTSLVVF 238 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+S AT I+ + EL ++ Y + L +V+++R Sbjct: 239 GGLGSMSGTLLATCIITLITELFRPISQY---------------RMLIYGAVLVMVMVLR 283 Query: 336 SHSLLRLRT 344 LL R Sbjct: 284 PDGLLGSRE 292 >gi|163743233|ref|ZP_02150614.1| ABC transporter permease protein [Phaeobacter gallaeciensis 2.10] gi|161383421|gb|EDQ07809.1| ABC transporter permease protein [Phaeobacter gallaeciensis 2.10] Length = 327 Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 113/314 (35%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L AV+ LL + ++ ++ ++ I + GL+I +G GL+SL + Sbjct: 6 LLNAAVILLLLAIPLWAHMTEEPFLITLATKVAILALAGVGLNIALGIGGLVSLGHAAFF 65 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y+ IL + L + ++ L ++ + + Sbjct: 66 GIGGYAMGILAAHAQNYEPLAEWPLLIEGTNQMPVIWLVAVVASALAALVIGALSLRTSG 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + G S+ FP + + + + + ++ Sbjct: 126 VYFIMITLAFGQMLYYFAISWSAYGGEDGLSIWVRNEFPGMNTLAPLQFFLICYAILCVA 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L R A R + ++ T +L+AF +S A G+AGA FA Sbjct: 186 LWFAARLARAPFGLALSAARQCEARVETVGITPYQLRLTAFVISGAITGLAGALFADLNR 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP MF + + ++ VI+GG+ L A+ I + L G++ Y+ L Sbjct: 246 FVSPTMFSWHTSGEIMIFVIIGGVGRLFGPVIGAALFILLEHLLGGISDYWQIYLGGLLL 305 Query: 315 SFNMRHTTLMVIAL 328 + ++ A+ Sbjct: 306 IIVLYARGGVIGAI 319 >gi|255262527|ref|ZP_05341869.1| inner-membrane translocator [Thalassiobium sp. R2A62] gi|255104862|gb|EET47536.1| inner-membrane translocator [Thalassiobium sp. R2A62] Length = 401 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 135/385 (35%), Gaps = 45/385 (11%) Query: 10 KYDKILCLLAVVYPLLLFLFLGAT------KSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 K ++L ++AV+ L + + + + +I+ +FA G +I+ G Sbjct: 7 KDARLLLIVAVMVALAPIILNPFPEDSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLT 66 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G LS G+Y+ + + +++ I +S +++G + +G SL+ G Y + Sbjct: 67 GYLSFGHAAFLGAGSYAGMWMMKLLSINVIPAIILSTVVAGVIALAIGWISLRRSGIYFS 126 Query: 124 IATLIMSEIFQNIL----------------------IKWKPITNGKAGIYVADRLYFLGT 161 I TL +++ + I + + G + + G Sbjct: 127 ILTLAFAQMAFALAASVLTPITGGETGLQTNLNDPRIFPEFLGGGSSVDGNIPKPSLFGI 186 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + S F + + YY+ M ++ I + + R+ + ++ NQ Sbjct: 187 EMSSS--FKVPVGGWEWTFNWGYYLCGVMMLVAFYIAIRIFRSPFGLMLKAVKSNQHRMS 244 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 L+ F +S + G+AG AA ++ + +++ + V+ + ILGG+ +L Sbjct: 245 YTGLNTRPYMLTCFVISGMYAGLAGGLMAAMDPQVGAERMQWTASGEVVLMTILGGIGTL 304 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIAL 328 ++ + +N + F + + Sbjct: 305 IGPVLGAGLIKYFENIFSKINSSLLHEWFAFLPDGLENFIVAIIYPFIGKGWHLTLGLMF 364 Query: 329 FLVILMRSHSL--LRLRTPSNFLER 351 VI+ L L R F ++ Sbjct: 365 MAVIIFLPGGLVELGKRLSKRFGKK 389 >gi|86152506|ref|ZP_01070711.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843391|gb|EAQ60601.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 350 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83 Y ++ QI I+++ A +++ G G SL AIGAY+ + Sbjct: 24 PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 83 Query: 84 ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + + S L + V+ + S +I+ + RGDYLAI TL Sbjct: 84 NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + I + ITNG G+ + Y G+ Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ +IL + + A + IRD++ A ++ + K AF+ S+ G+ G A Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309 +SP F F ++ I++LGG+ S + ++IG E ++ SL Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 S + I L LV+L ++ S+ + Sbjct: 299 NIDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339 >gi|27378727|ref|NP_770256.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351876|dbj|BAC48881.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 337 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 70/321 (21%), Positives = 124/321 (38%), Gaps = 25/321 (7%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L + Y I LI+++ A GL+++ G GLLSL + IGAY+ Sbjct: 30 LALGALACVAPLFLGNYPLHAIIIALIFLLPAHGLNLLQGYTGLLSLAQAAFFGIGAYTS 89 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L +G +L + +++GA +G+P+L+ R + TL I Q I W Sbjct: 90 ALLAVHFGTPFYLNFLAAGLVTGAIAAPLGIPALRLRTTSFVMCTLGFVIIGQAIAKNWI 149 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ + YF S V + YY+ L + L+ + + Sbjct: 150 SLTRGDMGLAGIPKPYFAL----------GPASFTVSGTVAFYYLTLVIAALATLAVYLI 199 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ IR+N+ S+ KL F +S+AF G+ G+ +A +SP F Sbjct: 200 VRSPAGRNMIAIRENETLAESVGIPTWHYKLVVFMISAAFAGLGGSLYAHYLTVVSPLTF 259 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + + ++ IV+ GG ++S + + + +G+ E Sbjct: 260 QMYYSTTMLIIVLGGGAGTISGVIFGSLLFVGLTEALR---------------VAPELRM 304 Query: 322 TLMVIALFLVILMRSHSLLRL 342 L ++ L Sbjct: 305 IAYGFFLLGLVFWFPSGFAPL 325 >gi|21225463|ref|NP_631242.1| branched amino acid transport system permease [Streptomyces coelicolor A3(2)] gi|9716223|emb|CAC01584.1| putative branched amino acid transport system permease [Streptomyces coelicolor A3(2)] Length = 349 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 130/337 (38%), Gaps = 25/337 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 AV LLL + T+ Y S+ + + + A GL +VG G +SL +A+G Sbjct: 17 AVFVVLLLAVPAVFTRVPFYTMSVAVLMCLQATAALGLVPLVGRAGQISLGQAAFFAVGG 76 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL R+ ++ L + ++ A ++GL + +G YLA+ATL + ++ Sbjct: 77 YTSAILTGRWHVNALLALTAGVALAMAVAYVVGLFIFRAQGQYLALATLSFGLVVSSLAN 136 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + +T G+ L G + + + +YY++ G+ ++ + Sbjct: 137 QLP-LTGASNGLAGIPSLAPFGVELDTD--------------LSVYYLVAGVLLVAVLSV 181 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +A + D+ A + + + A A+++ +AG+ +A + Sbjct: 182 DALLRSPAGDALSALGDSPVATEAAGVSAAALRRGALALAAGLASIAGSLYAHWSSFMDS 241 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 ++ ++ I +GG+ + +++ E + F + Sbjct: 242 GQAGLLNSVQLLVIASVGGLRTPWGAPLGALVIVTFSEASKDLIPKV------FPSATGN 295 Query: 319 RHTTLMVIALFLVILMRSHSLLR----LRTPSNFLER 351 + IAL V+L + R S + Sbjct: 296 FDIIVYGIALIAVLLFLPRGVGGVTAVRRERSVRKRQ 332 >gi|260584959|ref|ZP_05852703.1| branched-chain amino acid ABC transporter permease [Granulicatella elegans ATCC 700633] gi|260157389|gb|EEW92461.1| branched-chain amino acid ABC transporter permease [Granulicatella elegans ATCC 700633] Length = 324 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 83/341 (24%), Positives = 143/341 (41%), Gaps = 43/341 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R ++ + I AVV LLL + + Y +S I I+I ++FA GL++++G G Sbjct: 6 RFHQKNLIWLASAVVIYLLLQVLVQVGVINFYYESTFINIMINIIFAVGLNLILGVAGQF 65 Query: 67 SLNCVIAYAIGAYSYVIL--GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 SL AIGAYS I+ ++ + V +IS ++GLP+L+ +GDYLAI Sbjct: 66 SLGHAGFIAIGAYSAAIIGKAVSGLAGLFAGMVVGVVISIVIAYLVGLPTLRLKGDYLAI 125 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 ATL ++EI + + + ITNG AGI + Sbjct: 126 ATLGVAEIIR-VALNNMKITNGAAGISGVPLTT-------------------------TW 159 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 ++ L+ ++L ++ A + ++ A S+ + K+ AF + +A + Sbjct: 160 TIVYIALVLTTILVLNYANSSAGRATYAVLQDEIAAESMGVNVTRYKMLAFIIGAATASI 219 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G A ++P F F ++I V+ IV+ GG+ S + A +L + Sbjct: 220 GGTLTATYLGTVTPSDFTFMKSIDVLIIVVFGGIGSFTGSFVAAILLGIINTFLQ----- 274 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + +AL L+++ R LL Sbjct: 275 ----------PFGQLRMIIYAVALILIMIFRPGGLLGTWEF 305 >gi|309781874|ref|ZP_07676607.1| branched-chain amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308919515|gb|EFP65179.1| branched-chain amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 543 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 269 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRNYFPNAFDWYLPAALPAAFLAAAVVGFA 328 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 329 LER--LVLRHLYGRPLETLLATFGISLLLMQAVRSIFGAQNVEVANPSWMSGGIALYPGL 386 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + +LL + A L RT + R N+ + AFA Sbjct: 387 VLPYNRLVILLFALAVVAIAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 446 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L + + Sbjct: 447 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 504 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++++ + L I R L L+ S Sbjct: 505 IEPFYGAVLAK-------------IIVLVLIVLFIQKRPQGLFALKGRSAE 542 >gi|238927652|ref|ZP_04659412.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas flueggei ATCC 43531] gi|238884577|gb|EEQ48215.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas flueggei ATCC 43531] Length = 316 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 41/333 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + A++ ++ A + I I ++ A L+++ G G SL Sbjct: 11 MLVFALIIYAVIMGLTSAGMLNAFWQLNLIFAGINIILAASLNLINGYTGQFSLGHAGFM 70 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AIGAY V+L + + L + +G G ++GLP+L+ RGDYLAIATL + EI + Sbjct: 71 AIGAYVGVVLTTNFHLPFAAALLAGGAAAGLLGALIGLPTLRLRGDYLAIATLGLGEIVR 130 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I+I + G AG L + + + Sbjct: 131 IIIINVPYV-GGAAGFKGIPHLTNFT-------------------------WVFFLMLAT 164 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 II + A IR+N+ A S+ K+ AF + + F G+AG F + Sbjct: 165 LCIIKNFVNSRHGRACLAIRENEIAAESMGINTTKYKVLAFTIGAFFAGVAGCLFGHNMY 224 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP F F ++ ++ +V++GG+ S++ ++ + Sbjct: 225 ILSPASFTFMQSFNILIMVVMGGLGSMTGSIAGALVVTFLSAALASF------------- 271 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL L++ R L + Sbjct: 272 --PNARMIIYALALILLMFYRPQGLFGYVEITA 302 >gi|222152612|ref|YP_002561787.1| branched-chain amino acid ABC transporter permease [Streptococcus uberis 0140J] gi|222113423|emb|CAR41102.1| branched-chain amino acid transport system permease protein [Streptococcus uberis 0140J] Length = 317 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 71/340 (20%), Positives = 136/340 (40%), Gaps = 42/340 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + +K + + LLL +G Y + + I I ++ A G ++V+G G Sbjct: 3 KNSKSIMAWFGIIALVYLLLSFLIGKDIIGPYYVQILMGIGISIIMAMGTNLVLGFSGQF 62 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L AIGAY+ I + +L + + +I+G G+++G P+L+ +GDYLAI Sbjct: 63 PLGQAGFMAIGAYTTAIFTNSMPTYLGFYLSMVLGVLIAGLVGVLVGFPTLRLKGDYLAI 122 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 ATL ++EI + ++ +TNG AG+ R Sbjct: 123 ATLGVAEIIRIAIVNGGDLTNGAAGLTGVLRYTSWP------------------------ 158 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 V+ L + + R++ ++R+++ A S+ K+ FA ++ + Sbjct: 159 -VVYAFVILIIILTMNFLRSSSGRQVISVREDEIAAESMGVNTTKMKVMTFAFAAMTASI 217 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+ + + P F +I + I +LGG+ S++ A +L + Sbjct: 218 AGSLYVGYIGTVVPKDFTLMRSIDYLIIAVLGGLGSMTGTIVAAIVLGALNMYLQSF--- 274 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + +AL LV++ + LL + Sbjct: 275 ------------SDVRMIIYSLALILVMVFKPSGLLGTKE 302 >gi|222100407|ref|YP_002534975.1| Branched chain amino acid ABC transporter, permease protein [Thermotoga neapolitana DSM 4359] gi|221572797|gb|ACM23609.1| Branched chain amino acid ABC transporter, permease protein [Thermotoga neapolitana DSM 4359] Length = 359 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 115/342 (33%), Gaps = 9/342 (2%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 RL+ + + V ++ L+L Y + I IY + A L+++ G G+ Sbjct: 7 RLSTRTNFILTVIFVLFMVFLLYLANRYMDSYKLRVVRLIAIYGIMAVSLNLINGITGIF 66 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 SL IGAY+ +L + + I + A Sbjct: 67 SLGHAGFILIGAYTASLLTLSPEQK--AMSFIIEPIVPWLANVHTDFLTATLAGGALAAL 124 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + + + G R+ + ++ I E + Sbjct: 125 FAFLIGWPVLRLSGDYLAIASLGFAEVIRI----VALNAISITNGPLGLKGIPEYSNIWW 180 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 G F++ L ++ A + +R+++ A ++ + +L +F + + F G++G Sbjct: 181 CYGWLFVTVLFTASLVNSSYGRALKAVREDRIAAEAMGINVFKHQLLSFVIGAFFAGVSG 240 Query: 247 AFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 + +A I P V+ +++LGG+ S+S A+ + E + Sbjct: 241 SLYAHWLTTIDPRITTLGPMLTFYVLIMIVLGGLGSISGSLIGAALFAILFEWLRDLEEP 300 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + M ++ LV++ ++ + Sbjct: 301 FTFFGIHVPGIKGM-RILVISAIFILVMIFWQRGIMGREELT 341 >gi|192361121|ref|YP_001981732.1| Branched-chain amino acid transport system / permease domain-containing protein [Cellvibrio japonicus Ueda107] gi|190687286|gb|ACE84964.1| Branched-chain amino acid transport system / permease component domain protein [Cellvibrio japonicus Ueda107] Length = 584 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 91/295 (30%), Gaps = 21/295 (7%) Query: 53 AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112 A GLSI G +G++++ IGAY ++ + I + ++ + ++G+ Sbjct: 309 AIGLSITFGVMGVINMAHGELMMIGAYVTWVVQQLFPNQIAYSLMIAIPSAFIVAGLVGI 368 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 + +L L + +L + + + + + Sbjct: 369 AIERGVIRFLYGRPL------ETLLATFGLSLILQQAARSIFSPLNRAVELPAWMSGSLE 422 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + + Y+ + + +++ L++T++ R + N+ ++ + Sbjct: 423 INPVLSITYNRLYIFIFGLLVFFALLAILKKTSLGLKVRAVSQNRAMARAVGVRASWVDA 482 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 F + S G+AG + + + I +V+ GG+ +L L Sbjct: 483 MTFGLGSGIAGIAGVALSQLTNV--GPNLGQAYIIDSFMVVVFGGVGNLWGTLVGAMGLG 540 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +L I R L + + Sbjct: 541 IINKFLEPYAGAVLAKVLVLVLLIL-------------FIQKRPKGLFPQKGRAA 582 >gi|295697593|ref|YP_003590831.1| inner-membrane translocator [Bacillus tusciae DSM 2912] gi|295413195|gb|ADG07687.1| inner-membrane translocator [Bacillus tusciae DSM 2912] Length = 343 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 147/336 (43%), Gaps = 31/336 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + +L +++ LL +++ ++ I +L+Y++ G+ ++ G+ GL Sbjct: 6 QQRNRNLLKWVSLAALLLAAAIWPWWVDDRFLLNVMINVLLYMVLGMGMHLIFGTAGLPF 65 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L Y IGAY+ +L +R W +P S ++ G P L+ RG+Y + +L Sbjct: 66 LGYAGFYGIGAYTAALLMTRGVS-FWAALPASVAAVCLVALLFGAPILRLRGEYFMLGSL 124 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + EI ++ I IT G GI + + + YY+L Sbjct: 125 ALGEII-HLTINNLDITGGPNGIVGIPKPRWF--------------GGTLSQPADFYYLL 169 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + +S +++ +L+++ + +W +R+++ A ++ KL F + SA+ G+AGA Sbjct: 170 LVVVLVSIALLTYLQKSTVGRSWLALREDELAAEAVGVPTYRRKLQLFVLGSAWAGVAGA 229 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F AA ++P F ++ +I I+I+GGM SL + T ++IG+ E + Sbjct: 230 FLAARMGIVTPGSFTLMNSVQMIGIIIVGGMGSLPGVVLGTVLMIGLPEFVRALAD---- 285 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + +A+ V+ R + + Sbjct: 286 -----------WRLVIFGVAIMAVLRFRPRGIWPTK 310 >gi|16119752|ref|NP_396458.1| ABC transporter, membrane spanning protein (branched chain amino acid) [Agrobacterium tumefaciens str. C58] gi|15162344|gb|AAK90899.1| ABC transporter, membrane spanning protein (branched chain amino acid) [Agrobacterium tumefaciens str. C58] Length = 364 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 129/328 (39%), Gaps = 16/328 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 VV + +L + + +++ + L + GL+++ G G +SL A+GA+ Sbjct: 21 VVVLAIAYLVVPFVGTSYLFEAILLPFLALSLAGVGLNLLTGYAGQVSLGSAAFMAVGAF 80 Query: 80 SYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + R + I ++ + + G++ GLPSL+ RG YLA++TL Q L Sbjct: 81 AAYNFDLRVDGLPLTVSIVLAGLSAAIIGIVFGLPSLRLRGFYLAVSTLAAQFFVQWALT 140 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K+ ++N A + + Y L + Sbjct: 141 KFSWLSNESASGVIDAPAL-------------SLAGISFEGPVGRYLFALTTVTALTFLA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRIS 257 L + + +RDN+ A + ++ KL AFA+SS IG+AG +A A + Sbjct: 188 YRLVSSQTGRNFIAVRDNETAARIIGVPVLRTKLLAFAISSFIIGVAGVIWAFAYLRTVE 247 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + ++ IVI+GG+ S+ A+++ + + + + Sbjct: 248 PAGFNLDRSFQILFIVIIGGLASIRGAFFGAALIVVFPLVLSRLGSLLLGDVFDSGV-LD 306 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345 M ++ + L +++ L+ L Sbjct: 307 MTQRIVIGALIILFLILEPDGLVSLWDR 334 >gi|134291966|ref|YP_001115735.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134135155|gb|ABO59480.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia vietnamiensis G4] Length = 347 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 115/295 (38%), Gaps = 9/295 (3%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L GA S+ ++L++ + A G ++++G GLLS I + +G+Y+ ++ Sbjct: 32 LAVAVAGALPLALDSGSLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYAAGVV 91 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + S+ + +A + A ++G S++ RG Y + TL ++F + +T Sbjct: 92 LTHGVESVTAALVAAAALGAAAAALVGWFSIRQRGTYFVMLTLAFGQLFYFVAYTTPDVT 151 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G+ R + F P + Y + + ++L + R+ Sbjct: 152 GGDNGLLDIPRPA---------LSVFGHPLVPLDSPWRYYGFVAVVFVAVFWLLLRVSRS 202 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 IRDN+ + + KL AF +S A G+AGA A + Sbjct: 203 VFGRTLLAIRDNEARAAAAGYDVRRFKLVAFVISGAVTGLAGALHALMTGIAPLSNIDYH 262 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + +++ + ++GG +L A + + + + L + ++ Sbjct: 263 TSEMILVMTVIGGTGNLFASVLGAAAYVLFADWLSTLWPRWLLLLGLVLIAVSLF 317 >gi|294102414|ref|YP_003554272.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261] gi|293617394|gb|ADE57548.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261] Length = 348 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 114/337 (33%), Gaps = 7/337 (2%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L + L LFL+ Y + + + + A L+++ G G+ SL Sbjct: 4 KTRNFILNLCGIGVLGLFLYWAQGNLDGYKIQVLNLVAVNAILALSLNLIYGFTGMFSLG 63 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 AIGAY IL + + I +I + L + + Sbjct: 64 HAGFMAIGAYVCAILILSPAQK--QALWILEPIIWPFSVIGAPFVVAVFIGGLIASFFGL 121 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + + G R+ T + + Y LL Sbjct: 122 LIAIPVLRLGGDYLGIATLGFAEIIRVVLTNLTPITNGALGIKGIPSYANIWWNYGWLLF 181 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ + N + IRD++ A ++ ++ +F + + F G+ GA Sbjct: 182 ----TLYFMVKFLNSNFGNVLKAIRDDEIAAKNMGIDTFRYRVISFTIGAFFAGIGGALM 237 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + I P MF F V+ I + GG+ SLS + I+ ++E + Sbjct: 238 GSLITTIDPKMFIFLLTFNVLMITVAGGLGSLSGSILGSFIITILLEWLRFVENPLTIGS 297 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + +AL +IL R ++ +R + Sbjct: 298 FEIP-GIPGMRMVIFSLALIFIILFRREGIMGMREIT 333 >gi|118588902|ref|ZP_01546309.1| possible branched-chain amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] gi|118438231|gb|EAV44865.1| possible branched-chain amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] Length = 358 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 113/315 (35%), Gaps = 15/315 (4%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + I+ +FA G +I+ G G LS +G+Y+ V G++ + ++ Sbjct: 17 DLLQKFAIFGLFATGFNILFGLTGYLSFGHAAFLGVGSYTAVWTFKLLGMNPIPAVIMAI 76 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPITNGKAG-IYVADRLYF 158 + SG + +G SL+ G Y +I TL +++ N+ PITNG+ G + Sbjct: 77 IASGIFALAIGYVSLRRSGIYFSILTLAFAQMSYNLAYSVLTPITNGETGLRVLRSDPRL 136 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +Y + + I + R+ R ++ NQ Sbjct: 137 FDGNGGQEGPLIANLFGVEMTGWGGFYFCAIILLIGFFIAQRIFRSPFGIMLRAVKTNQN 196 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L+AF +S + G+AGA + + +++ + V+ + ILGG Sbjct: 197 RMTYTGLNPRPYTLAAFVISGMYAGLAGALMCITDPLAGAERMQWTASGEVVLMTILGGA 256 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF-------------NMRHTTLMV 325 +L A++ + N + + F F + Sbjct: 257 GTLLGPIFGAALIKYFENIFSAFNEQTLHEIFSFLPDFIEGPVISVAGLFVGEGWHLTLG 316 Query: 326 IALFLVILMRSHSLL 340 + L+++ L+ Sbjct: 317 VLFMLIVIFLPGGLM 331 >gi|229590870|ref|YP_002872989.1| putative branched-chain amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229362736|emb|CAY49646.1| putative branched-chain amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] Length = 355 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 132/337 (39%), Gaps = 16/337 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + F L + + ++ + +L+ + GL+++ G G LSL A+ Sbjct: 27 IGLWLLLGFAFFALPWLGNDYWFSAILVPLLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ + GL + + + +I+ ++ GLPSL+ +G YL +ATL + + Sbjct: 87 GAFAAYNLHLRVPGLPLLVSFALGGVIAALVAVLFGLPSLRIKGFYLLVATLAAQFVVEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L ++ TN A + Y + L + Sbjct: 147 VLTRFSWFTNDNASGVITSPPL-------------LVAGLDFSSPRGRYVLTLTLVAALF 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + L R+ + W +RD A + ++ KL AFA+S ++G+AG+ +A A Sbjct: 194 WLGKNLVRSELGRNWMAVRDMDTAAAVIGIRLLKTKLLAFAISGFYLGVAGSLWAFAYLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F S + V+ I+I+GG+ S+ A ++ L + L+ Sbjct: 254 TVEPHGFDLSRSFQVLFIIIIGGLGSVLGNFLGAAFIVLFPILLGNLFALLPAGLMDAGQ 313 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 N++ L + ++ L RL R Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARLWQRFRQRAR 349 >gi|283956414|ref|ZP_06373894.1| LOW QUALITY PROTEIN: branched-chain amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792134|gb|EFC30923.1| LOW QUALITY PROTEIN: branched-chain amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] Length = 350 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 126/341 (36%), Gaps = 47/341 (13%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83 Y ++ QI I+++ A +++ G G SL AIGAY+ + Sbjct: 24 PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 83 Query: 84 ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + + S L + V+ + S +I+ + RGDYLAI TL Sbjct: 84 NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + I + ITNG G+ + Y G+ Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ +IL + + A + IRD++ A ++ + K AF S+ G+ G A Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFGTSAFLEGVGGGLLAC 238 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309 +SP F F ++ I++LGG+ S + ++IG E ++ SL Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 S + I L LV+L ++ S+ + Sbjct: 299 NLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339 >gi|254474368|ref|ZP_05087754.1| inner-membrane translocator [Ruegeria sp. R11] gi|214028611|gb|EEB69446.1| inner-membrane translocator [Ruegeria sp. R11] Length = 400 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 119/357 (33%), Gaps = 29/357 (8%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 L L A + + + +I+ +FA G +I+ G G LS Sbjct: 16 AFLTLFAPFILNPFPEGSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGHAA 75 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 +G+Y+ V + +++ I +S +++G +++G SL+ G Y +I TL +++ Sbjct: 76 FLGVGSYAAVWMFKLLSMNVIPAIILSVIVAGLFSLLIGFVSLRRSGIYFSILTLAFAQM 135 Query: 133 FQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 + P G + + + F S+ Sbjct: 136 MFALAYSVLTPITGGETGLQLALDDPRILGSSQTPEGNIPVPGLFGMEMRDSFDLELGSW 195 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 V YY + S + + + R+ R ++ NQ+ L+AF Sbjct: 196 VFTFNIGYYFCALVLIASFYLAIRIFRSPFGMMLRAVKSNQQRMNYTGLNTRPYTLAAFV 255 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S + G+AG A+ + +++ + V+ + ILGG +L + Sbjct: 256 ISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYFEN 315 Query: 297 LCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSHSLL 340 + +N + F + I +V++ L+ Sbjct: 316 IFSKINATILHEWFAFLPDGLEDFIVAILYPFIGKGWHLTLGILFMMVVIFLPGGLV 372 >gi|241663462|ref|YP_002981822.1| urea ABC transporter permease protein UrtB [Ralstonia pickettii 12D] gi|240865489|gb|ACS63150.1| urea ABC transporter, permease protein UrtB [Ralstonia pickettii 12D] Length = 543 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 269 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRNYFPNAFDWYLPAALPAAFLAAAVVGFA 328 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 329 LER--LVLRHLYGRPLETLLATFGISLLLMQAVRSIFGAQNVEVANPSWMSGGIALYPGL 386 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + +LL + A L RT + R N+ + AFA Sbjct: 387 VLPYNRLVILLFALAVVAIAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 446 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L + + Sbjct: 447 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 504 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++++ + L I R L L+ S Sbjct: 505 IEPFYGAVLAK-------------IIVLVLIVLFIQKRPQGLFALKGRSAE 542 >gi|121612562|ref|YP_001000695.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87249165|gb|EAQ72126.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 350 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 135/355 (38%), Gaps = 47/355 (13%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + ++F+F+ Y ++ QI I+++ A +++ G G SL AIG Sbjct: 10 LIFLIASIVFIFVSPYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 69 Query: 78 AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 AY+ + + + + S L + V+ + S +I+ + Sbjct: 70 AYAAALVLLSADAKNDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRV 129 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL I + I + ITNG G+ + Sbjct: 130 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 169 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 Y G+ ++ +IL + + A + IRD++ A ++ + K AF+ Sbjct: 170 -----TIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFST 224 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+ G+ G A +SP F F ++ I++LGG+ S + ++IG E Sbjct: 225 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEW 284 Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ SL S + I L LV+L ++ S+ + Sbjct: 285 LRFLDELNIKIDSLNLDIQSMPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339 >gi|254440285|ref|ZP_05053779.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] gi|198255731|gb|EDY80045.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] Length = 358 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 82/344 (23%), Positives = 141/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F + ++Y L +L + + + +++ + LIY + A GL+I+ G Sbjct: 20 FPIAFDRYRYWAILA------FAYLVIPFLINDYWANAILVPFLIYAIAAIGLNILTGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAYS ++ S +SI + + ++ I+ G GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYSCYKLMTSFPDVSILIHVILAGGITAIVGAAFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + K N A ++ + F + Sbjct: 134 AVATLAAQFFLVWLFNKVSWFYNYSASGQISAP---------ERLVFGAAVTGPNTEPWV 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y V L + A I L R + +W IRD A + + AKL+AFAVSS FI Sbjct: 185 QYMVCLVFVTICAIIARNLTRGTLGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F + D F ++ +V+ ++ILGG+ S+ A L+ + L Sbjct: 245 GISGALFFSVYLGAVEVGDAFGIQKSFLVLFMIILGGLGSIFGSFAGAAFLVLLPVLLKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + ++ + ++ H L +L Sbjct: 305 VGVDLLGWPTDL---VSHLRLVIIGALIMFFLIKEPHGLAQLWR 345 >gi|126741261|ref|ZP_01756940.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] gi|126717666|gb|EBA14389.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] Length = 400 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 128/363 (35%), Gaps = 32/363 (8%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + I+ +L + P +L F + ++ + + +I+ +FA G +I+ G G L Sbjct: 10 RMLMIVAILTLCAPFILNPFPTDSALAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYL 69 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S +G+YS V + +++ I +S +I+G +++G SL+ G Y +I T Sbjct: 70 SFGHAAFLGVGSYSAVWMFKLLSMNVVPAIMLSVVIAGIFALLIGYVSLRRSGIYFSILT 129 Query: 127 LIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 L +++ N+ P G + + F Sbjct: 130 LAFAQMSFNLAYSVLTPITNGETGLQLTLEDPRVLGVSATADGSIPVTNLFGLEMRSTFE 189 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 + YY+ + S + + + R+ R ++ NQ+ Sbjct: 190 MAVGPWAFQFNAGYYLCALILLASFYLSIRIFRSPFGMMLRAVKSNQQRMNYTGLNSRPY 249 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 L+AF +S + G+AG A+ + +++ + V+ + ILGG +L Sbjct: 250 TLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGF 309 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSH 337 + + +N +S F + I LV++ Sbjct: 310 IKYFENIFSKINDNVLHSWFSFMPDGMEDFVVFVIHPFIGKGWHLTLGILFMLVVIFLPG 369 Query: 338 SLL 340 L+ Sbjct: 370 GLV 372 >gi|148243965|ref|YP_001220204.1| inner-membrane translocator [Acidiphilium cryptum JF-5] gi|146400528|gb|ABQ29062.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidiphilium cryptum JF-5] Length = 328 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 126/325 (38%), Gaps = 26/325 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + A + L L + + ++L+Y M A GL++++G G LS + + Sbjct: 22 ISAAIIWLALLFVPIWLPAIGGFTDLASRVLVYAMAATGLNLLLGYTGGLSFGHAAYFGL 81 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY + S+ L + ++ G G+++G +K +G Y A+ T+ ++F + Sbjct: 82 GAYGTGLFIIHVIPSMPLALIAGTLLGGIGGILVGPMVMKRKGIYFAMITIAFGQMFYFL 141 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++W +T G+ G T S + + + YYV+L + + Sbjct: 142 AVRWNTVTGGEDG-----------LTGFSRVPLHLGGEAINLGPARFYYVVLALFAVVML 190 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + R+ + +A+ R+N L + AFA+S+ +AG+ A Sbjct: 191 VVWQILRSPMGHAFVATRENTTRLRFLGVAVDKQVWVAFAISAFITALAGSLNAMLTAFA 250 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SPD ++ + + I +LGGM S I I + + Sbjct: 251 SPDDLQWQLSGSFVVICVLGGMRSFWGPFLGAVIYIAAQDYLSSV--------------- 295 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + + L +L LL Sbjct: 296 TQNWMSFIGLIFVLSVLFFPQGLLG 320 >gi|306823908|ref|ZP_07457282.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|309802403|ref|ZP_07696510.1| branched-chain amino acid ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|304552906|gb|EFM40819.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|308221003|gb|EFO77308.1| branched-chain amino acid ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 469 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 97/305 (31%), Gaps = 28/305 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I L+ + + G+++V G+ GL S + +G + + + + +I Sbjct: 189 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAYVGTQMLHMPVVASAIFAIVI 248 Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 G+I R + +I++ L G + Sbjct: 249 GAITGLIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 301 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 F + ++ L + + L+L +T + A R + DN Sbjct: 302 -----KSVPDSFQLGPITTDMPTLLSALIAICVIIGVTLFLYKTRLGRATRAVSDNAALA 356 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + + +S + ++G + IS + + +++ + V LGG+ + Sbjct: 357 AASGINVDQVVRVVWILSCSMAALSGVLLGIYLNGISWNT-GATLILLMFAAVTLGGLGT 415 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + ++ V ++ + N + L +V+L+R + Sbjct: 416 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 462 Query: 341 RLRTP 345 + Sbjct: 463 GKQQR 467 >gi|91787289|ref|YP_548241.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91696514|gb|ABE43343.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Polaromonas sp. JS666] Length = 524 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 93/310 (30%), Gaps = 17/310 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I S I ++ A GL+I G +G++++ IGAY+ ++ + + Sbjct: 231 IFSGISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQKYLPGAFDW 290 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + ++ + + +L W + + Sbjct: 291 YLLAAVPVAFLASALMGAALER--SVIRFLYGRPLETLLATWGISLMLQQLVRSIFGAQN 348 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +G + + ++ + + + RT + R + N+ Sbjct: 349 VGVENPVWMSGGVQVLGNLSLPYNRLVIIGFAIAVLLGMAWLISRTRLGLFVRGVTQNRP 408 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + AFA+ S G+AG A S+ + +V+LGG+ Sbjct: 409 IASCMGVNTARVDTYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGV 466 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L+ A L + + G +++ + + I R Sbjct: 467 GQLAGTVYAAMGLGILNKFLEGWTGAVLAK-------------IAVLVFIIIFIQKRPQG 513 Query: 339 LLRLRTPSNF 348 + ++ S Sbjct: 514 IFAMKGRSAE 523 >gi|254227653|ref|ZP_04921084.1| amino acid or sugar ABC transport systems, permease protein, putative [Vibrio sp. Ex25] gi|262395701|ref|YP_003287554.1| branched-chain amino acid transport system permease protein livM [Vibrio sp. Ex25] gi|151939695|gb|EDN58522.1| amino acid or sugar ABC transport systems, permease protein, putative [Vibrio sp. Ex25] gi|262339295|gb|ACY53089.1| branched-chain amino acid transport system permease protein livM [Vibrio sp. Ex25] Length = 355 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 128/322 (39%), Gaps = 17/322 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + ++ + Y ++ IQI + A GL+I+VG G +SL + GA+ Sbjct: 31 LAIAGVIAMLAAPLVLDIYFLNLFIQIAYLGIAALGLNILVGFTGQISLGHGAFFGFGAF 90 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L +++ + + IP++ ++ GM+ GLP+ + +G YLAIATL I ++ + Sbjct: 91 ASAWLNNQFNIPVVFAIPLAGYLTMIVGMLFGLPAARIKGLYLAIATLAAQFILEDFFAR 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + G G F +Y+ L Sbjct: 151 ADWFSGGSYGAGANPINLFGFEFTTDE---------------SFFYIALFALIFMYMWAS 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ A+ ++RD+ + + + +L +F V + + G+ GA + +S + Sbjct: 196 NLIRSRDGRAFVSVRDHYLSAEIMGINLTKYRLLSFGVCAFYAGIGGALYGHYLGFVSAE 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG--MNFYYFNSLLKFDCSFN 317 F +I ++++I+GG+ S+ T ++ + E+ F++ F Sbjct: 256 GFTIMMSIQFLAMIIIGGLGSVKGTLMGTIFIVLLPEVLEFGVTGLAAFSNNTSFVDGLA 315 Query: 318 MRHTTLMVIALFLVILMRSHSL 339 + + + L ++ L Sbjct: 316 YFKEMAIGLVIMLFLIFEPQGL 337 >gi|86150505|ref|ZP_01068730.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596131|ref|ZP_01099368.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562632|ref|YP_002344411.1| branched-chain amino-acid ABC transporter permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839100|gb|EAQ56364.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190972|gb|EAQ94944.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360338|emb|CAL35134.1| branched-chain amino-acid ABC transport system permease protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926246|gb|ADC28598.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315058459|gb|ADT72788.1| Branched-chain amino acid transport system permease protein livM [Campylobacter jejuni subsp. jejuni S3] gi|315930766|gb|EFV09770.1| branched-chain amino acid transport system / permease component family protein [Campylobacter jejuni subsp. jejuni 305] Length = 350 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83 Y ++ QI I+++ A +++ G G SL AIGAY+ + Sbjct: 24 PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 83 Query: 84 ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + + S L + V+ + S +I+ + RGDYLAI TL Sbjct: 84 NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + I + ITNG G+ + Y G+ Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ +IL + + A + IRD++ A ++ + K AF+ S+ G+ G A Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309 +SP F F ++ I++LGG+ S + ++IG E ++ SL Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 S + I L LV+L ++ S+ + Sbjct: 299 NLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339 >gi|153952098|ref|YP_001397905.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939544|gb|ABS44285.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. doylei 269.97] Length = 350 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83 Y ++ QI I+++ A +++ G G SL AIGAY+ + Sbjct: 24 PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAATLVLLSADAK 83 Query: 84 ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + + S L + V+ + S +I+ + RGDYLAI TL Sbjct: 84 NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + I + ITNG G+ + Y G+ Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ +IL + + A + IRD++ A ++ + K AF+ S+ G+ G A Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309 +SP F F ++ I++LGG+ S + ++IG E ++ SL Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 S + I L LV+L ++ S+ + Sbjct: 299 NLDIQSTPGFRMVVFSIVLILVMLFARKGIMGYDELSDVIR 339 >gi|294341705|emb|CAZ90124.1| putative High-affinity branched-chain amino acid transport protein, ATP binding component [Thiomonas sp. 3As] Length = 592 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 109/321 (33%), Gaps = 22/321 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + +L L + Y M + + V+ GL ++ G GL S +GAY+ Sbjct: 7 LIAFILALCIAPFMLHGYPMLMLNYVGLSVIVVLGLVLLTGVGGLTSFGQAAFVGMGAYA 66 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L + + WL + +++ +++G +L+ G YL ++TL Sbjct: 67 AAWLTTTQDWNPWLTLLAGLLLTTVAAVVLGWVTLRMSGHYLPLSTLAWGIAIYLTFGNS 126 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + + G+ GI L G + +F ++ + + Sbjct: 127 QTL-GGQTGITGIPPLSLFGWQLTESWQFH--------------ILIWAVVLSIIWTVHN 171 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + A R ++ ++ K+ F +++ + +AG +A + ++P Sbjct: 172 MLDSREGRAMRALKGGTLMAEAMGVNTTRFKIILFVLAAQYACVAGWIYAYMQRFVNPTP 231 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + I + + ++GG+ L + + E F+ Sbjct: 232 FSLGQGIEYLFMGVVGGIAELWGGVVGSFLYALPREWLHSHLPSLLGRSGSFEG------ 285 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + + + +++ L Sbjct: 286 -IIFGVLMIIILQRAPEGLWP 305 >gi|113867096|ref|YP_725585.1| ABC-type transporter, permease component [Ralstonia eutropha H16] gi|113525872|emb|CAJ92217.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 547 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ S + + + Sbjct: 273 ITYGLIGVINMAHGEFLMIGAYATYVVQSLFRAYAPGAFDWYLPAALPASFLAAALVGFV 332 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + + + Sbjct: 333 LER--LVLRHLYGRPLETLLATFGVSLLLMQAVRTLFGAQNVEVANPAWMSGGIEWMPGL 390 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++L + A L RT + R N+ + AFA Sbjct: 391 VIPYNRIVIILFALAVVAVAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 450 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I +V+LGG+ L+ L + + Sbjct: 451 GAGIAGLGGC--ALSQIGNVGPDLGQAYIIDSFMVVVLGGVGQLAGTIVGAFGLGIINKF 508 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R L L+ S Sbjct: 509 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 546 >gi|86607099|ref|YP_475862.1| hydrophobic amino acid ABC transporter permease [Synechococcus sp. JA-3-3Ab] gi|86555641|gb|ABD00599.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Synechococcus sp. JA-3-3Ab] Length = 319 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 128/318 (40%), Gaps = 26/318 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88 Y + + IY + GL+I G G+ ++ +A+GAY+ I + + Sbjct: 3 SYAIFFLVLVGIYGVLVLGLNIQWGYAGMFNIGVGAFFAVGAYASAIATTPPTPEHLGGF 62 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L W+ ++ + +GA ++GL +LK R DYLAIAT+ ++EI IL +TNG Sbjct: 63 DLPFWVGFAMAVVAAGAIAFLIGLITLKLRSDYLAIATIGIAEIISQILKNEGWLTNGVR 122 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 GI R + + + + + ++ R+ Sbjct: 123 GITRIPRPFRGWIPGQDTLLYLGLVLLVLAVVYWL--------------SERAYRSPWGR 168 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE-NI 267 R IR+++ A + ++ +L AF + S +G+AGA +A + ISP+ F+ Sbjct: 169 VLRAIREDEPAALAAGKDVLQFRLQAFVLGSMLMGLAGALYAHFVNFISPEAFQPEFATF 228 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 IV ++I GG + ++ GV + + +++ Sbjct: 229 IVWVMLIAGGSGNNRGALLGALVIWGVWSGSEWLTNRLPPQWATRAGPLRILLIGILLQV 288 Query: 328 LFLVILMRSHSLLRLRTP 345 + L RS LL R P Sbjct: 289 ILLT---RSQGLLPERPP 303 >gi|107028473|ref|YP_625568.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|116686468|ref|YP_839715.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|105897637|gb|ABF80595.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia AU 1054] gi|116652183|gb|ABK12822.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia HI2424] Length = 347 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 124/313 (39%), Gaps = 12/313 (3%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 RL + +L ++ L S S+ ++L++ + A G ++++G GLL Sbjct: 17 RLRPWRGLLQRPEGWLAVVAACVLPLVLSSG---SLATEVLVFALAALGCNLLLGYTGLL 73 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S I + +G+Y+ ++ +R S+ + + +A++ ++G S++ RG Y + T Sbjct: 74 SFGQGIFFGLGSYAAGLVLTRGVASVSVALLAAAVLGAVAAALVGWFSIRQRGTYFVMLT 133 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++F + +T G G+ R + F P + Y Sbjct: 134 LAFGQLFYFLAYTTPDVTGGDNGLLDIPRPA---------LAAFGHPLVALDSPWRYYGF 184 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++L + R+ IRDN+ + + KL+AF +S A G+AG Sbjct: 185 VAVLFVAVFWLLLRVSRSVFGRTLLAIRDNEARAAAAGYDVKRFKLAAFVISGAVTGLAG 244 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A A + + +++ + ++GG +L A + + + + Sbjct: 245 ALHALMTGIAPLSNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRWL 304 Query: 307 NSLLKFDCSFNMR 319 L + ++ Sbjct: 305 LLLGLVLIAVSLF 317 >gi|119025089|ref|YP_908934.1| branched-chain amino acid transport system permease protein [Bifidobacterium adolescentis ATCC 15703] gi|154486424|ref|ZP_02027831.1| hypothetical protein BIFADO_00238 [Bifidobacterium adolescentis L2-32] gi|118764673|dbj|BAF38852.1| branched-chain amino acid transport system permease protein [Bifidobacterium adolescentis ATCC 15703] gi|154084287|gb|EDN83332.1| hypothetical protein BIFADO_00238 [Bifidobacterium adolescentis L2-32] Length = 327 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 122/313 (38%), Gaps = 8/313 (2%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + YV+ A GL+I G GL+++ +GAY + I G +++ + + Sbjct: 15 IAPTTAAYVLAAIGLNIHFGMTGLMNMGQAGFMLLGAYGFAI-TQSMGCNLFASVCAALA 73 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159 ++ +++G+P+LK DYLA+ TL +EI + I T G AGI D Sbjct: 74 LAVIYALLLGIPTLKLGPDYLAMVTLAAAEIIRIIGRSTAMTNFTGGSAGISPQDFTEKF 133 Query: 160 ----GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 S S+ + ++ V + ++A + + + IR+ Sbjct: 134 ESLSPLPDGSTTFLLWTYSNNIANSWWLRIVAWVLVVIAALLCWRWFHSPWGRMLKGIRE 193 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A SL + K+ + + F +AG F + PD + V +I++L Sbjct: 194 DENAIRSLGKPVTRYKMESLILGGLFGAIAGIIFVLP-RSVQPDSLGRTVTFYVWTILLL 252 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ + +L ++ + L ++ +AL +++ R Sbjct: 253 GGAATILGPVLGSCVLWVLLTFVKEVMRNTVPETLISSNQIEALGWVIVGVALMCLVIFR 312 Query: 336 SHSLLRLRTPSNF 348 LL R F Sbjct: 313 PQGLLGDRKELAF 325 >gi|146277041|ref|YP_001167200.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025] gi|145555282|gb|ABP69895.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025] Length = 642 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 101/321 (31%), Gaps = 26/321 (8%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGS 86 +G ++ IY + A GL+I G + ++++ +GAY+ + + Sbjct: 343 VGLMQAADLALDAVSLASIYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWIA 402 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 Y +SI + +P++ ++ A G+ M + + TL+ + L + G Sbjct: 403 DYTISILVALPLAFAVTFAAGVAMERLVI-RHLYRRPLETLLATFGISIALQQLAKNIFG 461 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + + + V + + ++ ++RT + Sbjct: 462 TQARPLTAP---------GWLDGALSFNDVVSISYIRIAIFVLALIFLGVFLIIMKRTRL 512 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R + N S+ + F + S G+AG S + Sbjct: 513 GLEVRAVTQNPSMAASMGINPDRINMLTFGLGSGIAGVAGVAIGLFAKVTSELGQDYIVQ 572 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 V++GG+ ++ A++ G + +N + + + Sbjct: 573 S--FMTVVVGGVGNIWGTLAGAAMIGGAQKGIEWLNPSNTLAAQTYMILLIIIFIQF--- 627 Query: 327 ALFLVILMRSHSLLRLRTPSN 347 R ++ LR + Sbjct: 628 --------RPRGIIALRGRAA 640 >gi|320335001|ref|YP_004171712.1| ABC transporter integral membrane subunit [Deinococcus maricopensis DSM 21211] gi|319756290|gb|ADV68047.1| ABC-type transporter, integral membrane subunit [Deinococcus maricopensis DSM 21211] Length = 541 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 5/302 (1%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 ++GL+ GL + A + + WL + +S + G+++G Sbjct: 201 ISFGLASFGLVAGLTLTGRALLVLNAAKAQGLATGLDAGFFWLFLALSIFAAAVMGVLIG 260 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 LP L+ +GDYLAI TL + E+ + + TNG G + F Sbjct: 261 LPVLRLKGDYLAIITLGLGEVIRVLANNLTLYTNGSQGTPPIKSASVPWLDALAGRLGFS 320 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + F+Y+++L + L + + L R+ I AW IRD++ A ++ ++ K Sbjct: 321 PDQYPL---FFLYFLVLIIISLIILVNIRLDRSRIGRAWIAIRDDEVAAQAMGIPLMRTK 377 Query: 232 LSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 L AFA ++F G+ G FAA I+P+ F +++I V+S+VILGGM S+ + A+ Sbjct: 378 LIAFATGASFAGIMGMIFAAKQAATITPESFVLNQSIGVLSMVILGGMGSIPGVILGAAV 437 Query: 291 LIGV-VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + + + + + N + + + + L + +L R LL + + L Sbjct: 438 VTLLNLSILPSLGEATANMNIPQQVNPAQLQRLVFGVILVVAMLFRPEGLLPNQRQAMQL 497 Query: 350 ER 351 Sbjct: 498 HE 499 Score = 52.9 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 37/78 (47%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + V LL + A + + IQI I+ A GL+IVVG GLL L Sbjct: 70 RWRTQPWAKVLVGAACLLLVLPWAGRDNTSLFDTAIQIGIFAALALGLNIVVGLAGLLDL 129 Query: 69 NCVIAYAIGAYSYVILGS 86 V +A+GAY + I GS Sbjct: 130 GYVAFFAVGAYMWGIFGS 147 >gi|328545194|ref|YP_004305303.1| Hydrophobic amino acid ABC transporter (HAAT) family, permease [polymorphum gilvum SL003B-26A1] gi|326414936|gb|ADZ71999.1| Hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Polymorphum gilvum SL003B-26A1] Length = 320 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 26/315 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88 Y MG+ I IY + A GL+I G GL ++ +A+GAY+ IL S + Sbjct: 8 NYALFMGVFIGIYALLALGLNIQWGYSGLFNVGIAGFFAVGAYTSAILTSPHAAGRIGGF 67 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L ++ + + +G +G L+FR DYLAIAT+ ++EI + ++ +TN Sbjct: 68 ELPFFVGWLGAMLAAGLIAWPIGKICLRFRSDYLAIATIGVAEIIRLVIKSEPALTNAAR 127 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 GI R + V S + ++L + ++ ++ Sbjct: 128 GITGIPRPFGDLPYVESQM--------------AYLAIVLVVLAVAYVMLERQFNAPWGR 173 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENI 267 R IRDN+ A ++ I + +L AF +A +G+ GA FA I+P+ Sbjct: 174 MMRAIRDNENAAQAMGKDIAYRRLEAFVFGAALMGLGGALFAHFNRSITPEAIDPMIATF 233 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 +V ++ILGG + ++ + + ++ L+ + Sbjct: 234 LVWIMLILGGSGNNRGAILGALVVWTIWSVSEIATD---RLPHEYAIKAKYIRVFLIGLM 290 Query: 328 LFLVILMRSHSLLRL 342 L V+ R LL Sbjct: 291 LQFVLRFRPEGLLPE 305 >gi|322417902|ref|YP_004197125.1| inner-membrane translocator [Geobacter sp. M18] gi|320124289|gb|ADW11849.1| inner-membrane translocator [Geobacter sp. M18] Length = 334 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 119/326 (36%), Gaps = 34/326 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L L ++ + + ++++ A ++ G G L+ + IG Sbjct: 9 AILAIIVAALLILPLVVHDTFVLRVVTEGIMWIGLAIAFDVIAGYTGYLNFGHGAFFGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL + L W +P + + +I G+P+L+ +G Y AIAT +S Q + Sbjct: 69 AYTIGILMMQAHLPFWAALPAGGVAAAIVALIAGIPTLRLKGAYFAIATWALSRAIQQLA 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + IT G G+ +F+ + F Y + + + Sbjct: 129 LNME-ITGGPDGMR---------------------LDAFLNPQFFYYLMFFTVGGTFLLL 166 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R + IR++++ +L K+ +F +S+ G+ G +A I Sbjct: 167 WYLLERAPFGLKLKAIREDEEGAKALGLNPTKLKMQSFILSALPTGILGGIYAYWITFID 226 Query: 258 PDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P + + +V+ GGM +L A ++ L F Sbjct: 227 PSSTLGDMVSDQAVVMVVFGGMGTLFGPALGAILIFAFKTLFWAYL-----------SDF 275 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 + + ++ + + ++ + L Sbjct: 276 QLLYLIILGALIAISVIFIPNGLWGT 301 >gi|114766073|ref|ZP_01445082.1| branched-chain amino acid ABC transporter, permease protein [Pelagibaca bermudensis HTCC2601] gi|114541628|gb|EAU44669.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. HTCC2601] Length = 400 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 60/378 (15%), Positives = 126/378 (33%), Gaps = 36/378 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKS------QKYIDSMGIQILIYVMFAWGLSIVVGSL 63 + + ++AV+ F+ + + +I+ + A G +I+ G Sbjct: 7 RDLTLFLIVAVMALFAPFILNPFPTDSGMAQFNAGYPDLMQRFVIFGILAIGFNILFGLT 66 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G LS +G+Y+ V + +++ I +S ++SG +++G SL+ G Y + Sbjct: 67 GYLSFGHAAFLGVGSYAAVWMFKLLSMNVIPAILLSMIVSGLFAVVIGYVSLRRSGIYFS 126 Query: 124 IATLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLI 167 I TL +++ N+ P G + + Sbjct: 127 ILTLAFAQMSYNLAYSVLTPITNGETGLQITLDDPRILGVSATADGGIPVTNLFGLEMRS 186 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + YYV + +S I + + R+ R I+ NQ + Sbjct: 187 FETLNIGPWAFQFSVGYYVAAVIMLISFYIAIRIFRSPFGMMLRAIKSNQNRLYYTGLNA 246 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 L+AF +S + G+AG A + +++ + V+ + ILGG +L Sbjct: 247 RPYTLAAFVISGMYAGLAGGLLACMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLG 306 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILM 334 + + +N + + F + + L+++ Sbjct: 307 AGFIKYFENIFSKINDQVVHGWVSFLPDGLEDLVVALIHPFVGKGWHLTLGLMFMLIVIF 366 Query: 335 RSHSLL-RLRTPSNFLER 351 L+ + S L R Sbjct: 367 LPGGLVEGGQRISRRLRR 384 >gi|300697939|ref|YP_003748600.1| branched-chain amino acid ABC transporter permease [Ralstonia solanacearum CFBP2957] gi|299074663|emb|CBJ54220.1| putative ABC-type branched-chain amino acid transport system, permease component [Ralstonia solanacearum CFBP2957] Length = 322 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 119/303 (39%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++G ++L+ + A ++ ++G G+LS + +GAY S L + Sbjct: 36 YTALGTRVLVLGLAAMSVNFLLGFTGVLSFGHAAYFGLGAYGAGFALKFLAPSTPLALVC 95 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ G G ++G S++ RG Y A+ T+ ++F I +W +T G G+ R+ Sbjct: 96 GTLLGGIAGALLGALSVRRRGVYFAMVTIAFGQVFYYIAFQWSSLTGGDDGLRGFSRMP- 154 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + YY +L L+ ++ ++ R+ + IR+N++ Sbjct: 155 --------LDLGFTTLDILSNADAFYYFVLACLALATGLMAFVLRSPFGHTLIAIRENER 206 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + AF +S F+G AGA +A + P +S++ + + ++GGM Sbjct: 207 RARFLGIPVNRHIWIAFTLSCFFMGFAGALYALLNNFADPRGLHYSQSGDFVMMAVMGGM 266 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S + + + + + + + + + ++L Sbjct: 267 RSFWGPLLGAVVFVVLQDYLSSL---------------TVNWMSFVGMLFVAIVLFFPRG 311 Query: 339 LLR 341 LL Sbjct: 312 LLG 314 >gi|73541025|ref|YP_295545.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72118438|gb|AAZ60701.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 363 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 127/329 (38%), Gaps = 26/329 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L L S K+ + +++I +FA L +++G GL+SL + Sbjct: 18 FAWLVAFALLASLPLLLTADSHKFYIELLSKVMIMAIFALSLQLLIGYTGLVSLGHAAYF 77 Query: 75 AIGAYSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 A AY+ IL + WLL+ + + A +++G+ L+ RG Y + TL +++ Sbjct: 78 AAAAYATAILAPEAGPGNGWLLLAGALGAAAALAVLVGMLVLRTRGVYFIMVTLAFAQMV 137 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + I G G Y+ R F V Y+++ + Sbjct: 138 YFVFHD-TKIAGGSDGTYIYFRPEFPVP---------GTQQLTVNDPSHFYWMVWAAMGV 187 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++ L R+ +A IR N++ + +L AF G+AG +A Sbjct: 188 TVVVLTLLLRSRFGHALVGIRHNEQRMRAAGYATYRYQLGAFVAGGMLAGLAGFLYAIQF 247 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ++P++ + ++ + +VILGG+ SL+ + + E M ++ Sbjct: 248 GFVNPEIASWHQSGNAMLMVILGGVGSLAGAVLGAFSFVLLAEWFSTMTRHW-------- 299 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 LM + + + + L+ L Sbjct: 300 -------QLLMGGFIIVAVALLPRGLVSL 321 >gi|114766292|ref|ZP_01445279.1| branched-chain amino acid ABC transporter, permease protein [Pelagibaca bermudensis HTCC2601] gi|114541493|gb|EAU44538.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. HTCC2601] Length = 358 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 13/329 (3%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L V ++ S+ ++ I ILIY + A GL+I+ G G LSL Sbjct: 26 AFLLAVILAFAWVIFPLMASEFAFQTLLIPILIYSLAALGLNILTGYAGQLSLGTAAFMG 85 Query: 76 IGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ ++ L+ + I S + S G+ G+PSL+ +G YLAIATL Sbjct: 86 VGAYACYKMVTLMPWLNPVVAILFSGVFSAGVGVAFGIPSLRIKGFYLAIATLAAQFFLV 145 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + KW + N V +L F + + YYV+L + L Sbjct: 146 WLFEKWGWLYNYN---------ASGAIQVPNLEMFGVYVAGPQASSTVQYYVVLAIVTLL 196 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASR 253 + + L R + W+ RD A + ++ +KL+AFAVSS +G+AGA F R Sbjct: 197 TLLCINLTRGNLGRTWKATRDMDIAAELIGINLMRSKLTAFAVSSYVVGVAGALFVFMWR 256 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 P++F + ++ I I+GG+ S+ +++G+ + + + Sbjct: 257 GAAEPNLFDIPLSFRILFIAIIGGLGSILGNYLGAILIVGLPVVLNTLPEAL--GIPISS 314 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + ++ + +++ H L RL Sbjct: 315 ATVEHLNIMIVGSLIIFFLIIEPHGLARL 343 >gi|84684359|ref|ZP_01012260.1| ABC branched amino acid transporter family, inner membrane subunit [Maritimibacter alkaliphilus HTCC2654] gi|84667338|gb|EAQ13807.1| ABC branched amino acid transporter family, inner membrane subunit [Rhodobacterales bacterium HTCC2654] Length = 358 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 78/342 (22%), Positives = 141/342 (41%), Gaps = 21/342 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F ++ ++ + + + + + + + +++ + LIY + A GL+++ G Sbjct: 20 FPIKFDRIAYYVLIA------VALIVVPFVINDYWANAVLLPFLIYAIAALGLNVLTGYA 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ S ++I+ I +S I+ GM+ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYASYKLMTSFPDVNIFFHIILSGGITALVGMLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + + N +V F + Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQISVPERAVFGIKVTGPQTEAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L FLSA I+ L R + W IRD A + + AKLSAFAVSS F+ Sbjct: 185 TYLFCLVFVFLSAWIVRNLTRGSTGRKWMAIRDMDIAAEIIGVNPLTAKLSAFAVSSFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA F + + F ++ +V+ ++I+GG+ S+ A ++ + L Sbjct: 245 GVAGALFFSVYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFMVLMPVLLKN 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + +++ H L L Sbjct: 305 TLVGGLGWATDLA---AHLEFMIVGGLILFFLIVEPHGLAAL 343 >gi|163855434|ref|YP_001629732.1| high-affinity branched-chain amino acid transport system permease protein [Bordetella petrii DSM 12804] gi|163259162|emb|CAP41462.1| high-affinity branched-chain amino acid transport system permease protein [Bordetella petrii] Length = 350 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 126/321 (39%), Gaps = 15/321 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + LF+ + I ++ +LI V+ GL I G G ++L +GAY+ Sbjct: 27 LVLFALFMMAMPLLFEPRIVAIVTTMLITVVVVLGLQINTGLAGQINLGQAAFMGVGAYT 86 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 IL S+ G IW +PV + + G I G+ +++ +G YLA+ T+ +F +++ Sbjct: 87 TAILASKAGWPIWAALPVGGVAAAVFGFIFGMSAVRIKGFYLALTTIAAQILFHFLVLNL 146 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 G + LG S +YY+ L + L Sbjct: 147 PASWLGGSAGITVQPAEILGFRFDSDR--------------SIYYLCLAVAALMLFGAYS 192 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + R+ A+ +RD+ A + ++ K AF + + + G+ G +A ++ D Sbjct: 193 VARSRHGRAFLAVRDDDVASGMMGINVVRTKAVAFLLGAFYAGIGGGLWAYYVRFVAVDQ 252 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F +I +I+++I+GG+ S++ ++ E+ + Sbjct: 253 FTLFHSIWLIAMIIVGGVGSITGALIGVLVIKLSQEIISSAGSTIVELVPFLGGDIVFAA 312 Query: 321 TTLMVIALFL-VILMRSHSLL 340 + + A+ ++ L+ Sbjct: 313 MNIFLGAMIAGFLIFEPRGLM 333 >gi|159042935|ref|YP_001531729.1| high-affinity branched-chain amino acid transport system permease livM [Dinoroseobacter shibae DFL 12] gi|157910695|gb|ABV92128.1| high-affinity branched-chain amino acid transport system permease protein livM [Dinoroseobacter shibae DFL 12] Length = 358 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 78/342 (22%), Positives = 140/342 (40%), Gaps = 21/342 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F + ++ L L V + + + ++ + LI+ + A GL+I+ G Sbjct: 20 FPIAFDRMRYYLVLAVAV------GIIPFVINDYWASAVMVPFLIWAIAAIGLNILTGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ + L+I + + + +I+ A G++ GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + K N F + Sbjct: 134 AVATLAAQFFLVWLFNKVPWFYNYS---------ASGQINAPERTMFGYAITGPNADAAP 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y L F+ A + L R I +W IRD A + + AKL+AFAVSS F+ Sbjct: 185 KYLFCLAFLFVLAWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA F + + F +++ +V+ ++I+GG+ S+ A ++ + L Sbjct: 245 GVAGALFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPVLLKN 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F ++ + +++ H L RL Sbjct: 305 VMVGSLGWDTAIAAHF---EFVVLGGLIIFFLIVEPHGLARL 343 >gi|327441688|dbj|BAK18053.1| ABC-type branched-chain amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 341 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 121/328 (36%), Gaps = 31/328 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + + L + + + Q I+ + A I++G G++S + + IG Sbjct: 13 LVYAVVVGVMAVLPFVLDSRTMTILLTQFCIFAILAMSYDILLGYTGIISFGHAMFFGIG 72 Query: 78 AYSYVILGSRYGL---SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY+ I+ S YG I V ++S +I G +L+ + + A+ TL +S +F Sbjct: 73 AYTTAIMLSDYGPSIGIFAASIVVGIVLSAIISVISGALTLRLKSHFYAMFTLAVSGLFL 132 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + KW+ +T G G F ++ Y+++L + Sbjct: 133 VLAEKWRTVTKGNDGFTFRAPELFRER-------------------LYFYFLVLICLVVI 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ + + IR+N++ SL + K+ A ++ + +AG+ +A S Sbjct: 174 FILLKRIVASPFGKVLVAIRENEQRTRSLGFKTLGYKIIASVIAGSVASLAGSLYAISLR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++ + + + + I+GG+ +L ++ G+ D Sbjct: 234 FVNTSVLTMDITLDALMMTIIGGVGTLIGPIIGAGVIEFAQHYLSGLAR---------DY 284 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 R I L ++ ++ Sbjct: 285 PIFERWIIFFGILYILAVIFFPRGIVGT 312 >gi|229493044|ref|ZP_04386839.1| ABC amino acid transporter, ATP-binding [Rhodococcus erythropolis SK121] gi|229320074|gb|EEN85900.1| ABC amino acid transporter, ATP-binding [Rhodococcus erythropolis SK121] Length = 616 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 113/275 (41%), Gaps = 15/275 (5%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 I + GL++ +G G L+L YA GAY+ ++ I L + S ++ Sbjct: 42 LACILALVVSGLNLSLGFAGELALGQAAMYAAGAYTAGLMSQAGHTDILLQLAASGAVAL 101 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 A G++ G+P L+ LA+ + + + ++L + T G+ G+ + F G+ + Sbjct: 102 AVGILTGVPGLRLGNWSLAMTSFFLVLLVPDVLAIFGGKTGGRNGLTGMEPPTFFGSELD 161 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + Y V++ + L +++ L + A+RT++ + S Sbjct: 162 TQQY---------------YMVVVVVTVLWFAVMRNLVVSRHGIAFRTLKQSPVLASSQG 206 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 ++ KL +A+ + G+AGA FA + ISP+ F F+ V++ ILGG S+ Sbjct: 207 VSVFRMKLLGYAIGAFPAGLAGALFANTDLFISPEAFGFTFATAVLAASILGGAASVYGA 266 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 AI+ Y F + Sbjct: 267 VVGAAIMQLGPNQSTAFQEYSLIFYGGFLIIGGVL 301 >gi|170735069|ref|YP_001774183.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|169821107|gb|ACA95688.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 347 Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 119/298 (39%), Gaps = 12/298 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++ L S S+ ++L++ + A G ++++G GLLS I + +G+Y+ Sbjct: 32 LAVVAACVLPLVLSSG---SLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYAA 88 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 ++ +R S+ + + +A++ ++G S++ RG Y + TL ++F + Sbjct: 89 GLVLTRGVASVSVALLAAAVLGAVAAALVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTP 148 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ R + F P + Y + + ++L + Sbjct: 149 DVTGGDNGLLDIPRPA---------LAAFGHPIVALDSPWRYYGFVAVLFVAVFWLLLRV 199 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ IRDN+ + + KL+AF +S A G+AGA A Sbjct: 200 SRSVFGRTLLAIRDNEARAAAAGYDVKRFKLAAFVISGAVTGLAGALHALMTGIAPLSNI 259 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + +++ + ++GG +L A + + + + L + ++ Sbjct: 260 DYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRWLLLLGLVLIAVSLF 317 >gi|260426778|ref|ZP_05780757.1| inner-membrane translocator [Citreicella sp. SE45] gi|260421270|gb|EEX14521.1| inner-membrane translocator [Citreicella sp. SE45] Length = 400 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 62/369 (16%), Positives = 125/369 (33%), Gaps = 36/369 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYID-------SMGIQILIYVMFAWGLSIVV 60 L K D L L+ V L L + + + + +I+ + A G +I+ Sbjct: 4 LGKKDVTLFLIVAVMALFAPFILNPFPTDSGLAQFNAGYPDLMQRFVIFGILAIGFNILF 63 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G LS +G+Y+ V + +++ I +S ++SG +++G SL+ G Sbjct: 64 GLTGYLSFGHAAFLGVGSYAAVWMFKLLSMNVLPAIVLSMVVSGLFAVVIGYVSLRRSGI 123 Query: 121 YLAIATLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVR 164 Y +I TL +++ N+ P G++ + Sbjct: 124 YFSILTLAFAQMSYNLAYSVLTPVTNGETGLQITLDDPRVLGQSATADGGIPVTNLFGLE 183 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + YYV + +S + + + R+ R IR NQ + Sbjct: 184 MRSFETLEIGPWAFQFSVGYYVAAVIMLISFYLAIRIFRSPFGMTLRAIRSNQNRLYYTG 243 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 L+AF +S + G+AG A + +++ + V+ + ILGG +L Sbjct: 244 LNARPYTLAAFVISGMYAGLAGGLLACMDPLAGAERMQWTASGEVVLMTILGGAGTLIGP 303 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLV 331 + + +N + + F + + L+ Sbjct: 304 VLGAGFIKYFENIFSKINDQVVHGWVSFLPDGLEDFVVALIHPFVGKGWHLTLGLMFMLI 363 Query: 332 ILMRSHSLL 340 ++ L+ Sbjct: 364 VIFLPGGLV 372 >gi|296137411|ref|YP_003644653.1| ABC transporter related protein [Thiomonas intermedia K12] gi|295797533|gb|ADG32323.1| ABC transporter related protein [Thiomonas intermedia K12] Length = 592 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 111/321 (34%), Gaps = 22/321 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + +L L + Y M + + V+ GL ++ G GL S +GAY+ Sbjct: 7 LIAFILALCIAPFMLHGYPMLMLNYVGLSVIVVLGLVLLTGVGGLTSFGQAAFVGMGAYA 66 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L + + WL + +++ +++G +L+ G YL ++TL + Sbjct: 67 AAWLTTTQDWNPWLTLLAGLLLTTVAAVVLGWVTLRMSGHYLPLSTLAWGIAIYLMFGNS 126 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + + G+ GI L G + +F ++ G+ + Sbjct: 127 QTL-GGQTGITGIPPLSLFGWQLTESWQFH--------------ILIWGVVLSIIWTVHN 171 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + A R ++ ++ K+ F +++ + +AG +A + ++P Sbjct: 172 MLDSREGRAMRALKGGTLMAEAMGVNTTRFKIILFVLAAQYACVAGWIYAYMQRFVNPTP 231 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + I + + ++GG+ L + + E F+ Sbjct: 232 FSLGQGIEYLFMGVVGGIAELWGGVVGSFLYALPREWLHSHLPSLLGRSGSFEG------ 285 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + + + +++ L Sbjct: 286 -IIFGVLMIIILQRAPEGLWP 305 >gi|163792961|ref|ZP_02186937.1| hypothetical protein BAL199_24269 [alpha proteobacterium BAL199] gi|159181607|gb|EDP66119.1| hypothetical protein BAL199_24269 [alpha proteobacterium BAL199] Length = 540 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 93/297 (31%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY ++ S L VS +I+ + Sbjct: 261 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFMVQEVIRTSAPALFDVSLLIALPLAFLTA 320 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 I + + +L W + + S Sbjct: 321 GAVGVVIER--GIIRWLYGRPLETLLATWGLSLVLQQAVRSIFGPTNREVGAPSW-MSGA 377 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + +++ L+RTA R + N++ S+ + Sbjct: 378 FELGGLTLTYGRVWIIVFAIAVFILLLVVLKRTAFGLQMRAVTQNRRMASSMGIRTTWVD 437 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 438 ALTFGLGSGVAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALTL 495 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 V + L+++ + L I R + L+ + Sbjct: 496 GVVNKFLEPYAGAVLGK-------------ILVLVFIILFIQKRPRGMFALKGRAVE 539 >gi|281413035|ref|YP_003347114.1| inner-membrane translocator [Thermotoga naphthophila RKU-10] gi|281374138|gb|ADA67700.1| inner-membrane translocator [Thermotoga naphthophila RKU-10] Length = 358 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 130/361 (36%), Gaps = 47/361 (13%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 +L+ + + + + L L+L Y + I IY + A L+++ G G+ Sbjct: 6 KLSARTNFILTVVFLIFMALLLYLADRYMDSYKLRVVRLIAIYGIMAVSLNLINGITGIF 65 Query: 67 SLNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACG 107 SL IGAY+ + + + +++ Sbjct: 66 SLGHAGFILIGAYTASLLTLSPEQKAMSFIIEPIVPWLANVHTDFFTATVAGGVLAAVFA 125 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 ++G P L+ GDYLAIA+L +E+ + I + ITNG G+ Sbjct: 126 FLIGWPVLRLSGDYLAIASLGFAEVIRIIALNAIRITNGPLGLKGIP------------- 172 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 E + G F++ I L ++ A + IR+++ A ++ + Sbjct: 173 ------------EYSNIWWCYGWLFVTVLFIASLVNSSYGRALKAIREDRIAAEAMGINV 220 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIA 285 +L +F + + F G++G+ +A I P V+ +++LGG+ S+S Sbjct: 221 FKHQLLSFVIGAFFAGVSGSLYAHWLTTIDPRTTTLGPMLTFYVLIMIVLGGLGSISGSL 280 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 A+ + E + + + ++ LV++ ++ Sbjct: 281 IGAALFAILFEWLRDLEEPFTFFGIHVP-GIKGMRILVISAIFILVMIFWQRGIMGREEL 339 Query: 346 S 346 + Sbjct: 340 T 340 >gi|119382933|ref|YP_913989.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119372700|gb|ABL68293.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Paracoccus denitrificans PD1222] Length = 333 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 126/329 (38%), Gaps = 30/329 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ ++ L + F A + + ++ +I + A L+ ++G GL+SL + Sbjct: 28 LVAAFVILAALAVAPFALAAIGHDFWTDVILRAMILGIAAVSLNFIIGLGGLVSLGHAVF 87 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 IG YS IL + + + + S A + G+ +L+ RG + + TL +++ Sbjct: 88 LGIGGYSVGILADLGIDNGPAQLGAALLFSAAFAWLTGMIALRTRGVHFIMITLAFAQMV 147 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 ++ + ++ F + + +YYV+L + Sbjct: 148 YFTMMGLRQFGG---------------DDGLTINYSTTFGPLDLGDKDVLYYVVLAVLGA 192 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + +RR+ + + N++ ++ +L+A+ + G+AG A Sbjct: 193 AMLGFARVRRSDFGLLLKAAKGNERRVSAVGFNAYRYRLAAYVAAGTLCGLAGFLDANFT 252 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ++P + + +I IVI+GG+ S+S + + + E G+ Y+ Sbjct: 253 GFVTPSAMSWISSGELIFIVIVGGIASVSGPIAGALVFLLIEEWMGGLTVYWH------- 305 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L +IL + L+ L Sbjct: 306 --------FWFGLFLIAIILFARNGLVGL 326 >gi|302343145|ref|YP_003807674.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075] gi|301639758|gb|ADK85080.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075] Length = 349 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 137/341 (40%), Gaps = 24/341 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 L++ L + Y Q+ I V+ A GL+++VG G +SL +AIGA Sbjct: 21 FWFIALIVALGVFPLFGDSYQIYTVNQMAINVIVALGLNLLVGYTGQISLGHAGFFAIGA 80 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y +++ + GL + +P++ ++S G ++GLP+L+ G YLAIATL IL Sbjct: 81 YGTLVMMIKLGLPFVVALPLAGLLSALFGFLLGLPALRLEGPYLAIATLGFGLTITQILG 140 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + + + Y V++ + + A + Sbjct: 141 RIEYFGG----------------HMGIQAPPLEIFGWTATSDAARYAVIMPIAVIMALAM 184 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L +T + A+ IRD++ A + I + K AFAVS+ F G+AG A I+P Sbjct: 185 RNLIKTRVGRAFVAIRDSEIAAECIGVNITYYKTLAFAVSAFFTGIAGGLMAFVLGFINP 244 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY--------YFNSLL 310 F +++ +S+V++GG+ S+ ++ + + ++ + Sbjct: 245 HTFNLMTSVLFLSMVVVGGLGSILGSVMGAVLITYLGQELAQISELPVIGHALMELSQQF 304 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + L+++ L + R Sbjct: 305 LSINGLPNVQFVIFGLIMVLIVIFEPLGLYGFWIRTKIYWR 345 >gi|284165018|ref|YP_003403297.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] gi|284014673|gb|ADB60624.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] Length = 449 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 124/391 (31%), Gaps = 54/391 (13%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + V + L L + M I +Y M L++ G GL ++ Sbjct: 28 FVAFAAIYLVYAAIGLALGYSLDGIVNTLRRMTYLIAVYGMVTLALNLHWGYTGLFNIGV 87 Query: 71 VIAYAIGAYSYVILGSRYGL-----------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119 AIG Y ++L + + I + +G G+++ +P+L+ R Sbjct: 88 AGFMAIGLYVTMMLAKPVDPTGAAQYPGLGLPMPIAIAGGVVAAGLAGLVVAIPALRLRA 147 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DY AI T+ +EI + L G + T F Sbjct: 148 DYFAITTIAFAEIVRLGLTSGMAQQFSVLGAELGTGGGRGLTRNYGDPMNVIFELEAFSS 207 Query: 180 EI-----------------FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + VL+ + +I R+ + IR++++A S Sbjct: 208 FVDLTNALFGFGPTQARALVYSIVLVLVLIGFYWLIQRTSRSPFGRVLKAIREDEEAAQS 267 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L K+ F + A +G+AG + R ++P F+ + +I+GG S + Sbjct: 268 LGKNTNRFKIKVFVLGCALMGLAGILWRVRRTGVTPTAFRPHVTFYIWIALIIGGAGSNT 327 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCS--------------------------F 316 + + + V+ ++ + F Sbjct: 328 GSVLGSGLFVAVLFEGPRYVRRLIEEVITVGDAPNTFAGAVAPLLSANPAPFLRYTFDEF 387 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 LM +AL L++ R LL R + Sbjct: 388 LTLQFVLMGVALVLLMHRRPDGLLGHREETA 418 >gi|251781859|ref|YP_002996161.1| putative branched chain amino acid ABC transporter permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390488|dbj|BAH80947.1| putative branched chain amino acid ABC transporter, permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126673|gb|ADX23970.1| branched-chain amino acid transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 317 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 76/343 (22%), Positives = 139/343 (40%), Gaps = 42/343 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + +K + + L+L L +G Y + + I I ++ A G ++V+G G Sbjct: 3 KEHKALLAWIFILALVYLILTLLIGTDILGPYYVQILMGIGIAIIMAMGTNLVLGFSGQF 62 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L A+GAY+ IL +L + V +++G +I+G P+L+ +GDYLAI Sbjct: 63 PLGQAGFMAVGAYATAILTKYMPTYLGFYLSMLVGVLVAGLIAVIVGFPTLRLKGDYLAI 122 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 ATL ++EI + +I +TNG AG + + + Sbjct: 123 ATLGVAEIIRIAIINGGELTNGAAG-------------------------LTGVLQYTSW 157 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 V+ + A ++L R+A +R+++ A S+ K+ FA+++ M Sbjct: 158 PVVYAFVVVIAIVMLNFIRSATGRQVIAVREDEIAAESMGVNTTKIKVITFALAAMTASM 217 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+ + + P F +I + I +LGG+ S++ A +L + Sbjct: 218 AGSLYVGYIGTVVPKDFTIMRSIDYLIIAVLGGLGSMTGTIVAAIVLGLLNMYLQNF--- 274 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL R Sbjct: 275 ------------SDVRMIIYSLALILVMVFRPGGLLGTREFRL 305 >gi|205355775|ref|ZP_03222544.1| putative branched chain amino-acid ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346209|gb|EDZ32843.1| putative branched chain amino-acid ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 350 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 134/355 (37%), Gaps = 47/355 (13%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + ++F+F Y ++ QI I+++ A +++ G G SL AIG Sbjct: 10 LIFLIASIIFIFTSPYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 69 Query: 78 AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 AY + + + + S L + ++ + S +I+ + Sbjct: 70 AYVAALVLLSADAKNDQFFLDGPSSFILAIHSNSFILALIMAGICSSLLALILAFAVFRV 129 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL I + I + ITNG G+ + Sbjct: 130 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 169 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 Y G+ ++ +IL + + A + IRD++ A ++ + K AF+ Sbjct: 170 -----TIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFST 224 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+ G+ G A +SP F F ++ I++LGG+ S + ++IG E Sbjct: 225 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEW 284 Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ SL + S + I L LV+L ++ S+ + Sbjct: 285 LRFLDELNIKIDSLNLYIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339 >gi|254464476|ref|ZP_05077887.1| inner-membrane translocator [Rhodobacterales bacterium Y4I] gi|206685384|gb|EDZ45866.1| inner-membrane translocator [Rhodobacterales bacterium Y4I] Length = 401 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 126/366 (34%), Gaps = 35/366 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKS------QKYIDSMGIQILIYVMFAWGLSIVVGSL 63 + +L ++A++ F+ + + +I+ +FA G +I+ G Sbjct: 7 RDTSLLIIVAILTLFAPFILNPFPTGSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLT 66 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G LS +G+YS V + G+++ I +S +++G +++G SL+ G Y + Sbjct: 67 GYLSFGHAAFLGVGSYSAVWMFKLIGMNVIPAIVLSVIVAGLFALLIGFISLRRSGIYFS 126 Query: 124 IATLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLI 167 I TL +++ N+ P G + + Sbjct: 127 ILTLAFAQMSFNLAYSVLTPVTNGETGLQLTLEDPRILGVSATADGSIPVTNLFGLEMRS 186 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 F + YY+ + + + + + R+ R ++ NQ+ Sbjct: 187 TFELAVGPWAFQFNAGYYLCALIMLAAFYLAIRIFRSPFGMMLRAVKSNQQRMNYTGLNT 246 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 L+AF +S + G+AG A+ + +++ + V+ + ILGG +L Sbjct: 247 RPYTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLG 306 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILM 334 + + +N +S F + I LV++ Sbjct: 307 AGFIKYFENIFSKINDNVLHSWFSFLPDGMEDAVVFLIHPFIGKGWHLTLGILFMLVVIF 366 Query: 335 RSHSLL 340 L+ Sbjct: 367 LPGGLV 372 >gi|154248071|ref|YP_001419029.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154162156|gb|ABS69372.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 545 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 91/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S L S I+ + Sbjct: 266 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQDFIRHSAPGLFDWSLAIALPLAFLFT 325 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + S Sbjct: 326 GLVGILIER--TVIRFLYGRPLETLLATWGVSLILQQAVRSVFGPTNQEVGAPSW-MSGA 382 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + +++L L+RT + R + N++ ++ Sbjct: 383 FQVGQLSITYNRLWIIVFALLVFFALLLVLKRTPLGLYVRAVTQNRRMAAAMGIRTGRID 442 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ I +V+ GG+ +L L Sbjct: 443 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFTL 500 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +L L+++ + L I R L L+ + Sbjct: 501 GIANKLLEPFAGAVLGK-------------ILLLVFIILFIQKRPRGLFALKGRAVE 544 >gi|260437003|ref|ZP_05790819.1| high-affinity branched-chain amino acid transport system permeaseprotein BraE [Butyrivibrio crossotus DSM 2876] gi|292810312|gb|EFF69517.1| high-affinity branched-chain amino acid transport system permeaseprotein BraE [Butyrivibrio crossotus DSM 2876] Length = 361 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 65/320 (20%), Positives = 132/320 (41%), Gaps = 24/320 (7%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 ++ + + + ++I ++ + A L++VVG LG LSL +GA++ + Sbjct: 25 FVMNTLNNSGVLSNVMSGLLVRICVWSIMAVSLNLVVGILGELSLGHAGFMYVGAFTGSL 84 Query: 84 LGSRYGLS-------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + I + A+ + G+++G L+ +GDYLAI TL EI + I Sbjct: 85 FTQITADMISNDLLRFVIGILIGAVTAAIFGILIGSAVLRLQGDYLAIVTLAFGEIIKGI 144 Query: 137 LIKWKPITNGKAGIYVADRLYF--LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 L + K + + I I + + + + ++ Sbjct: 145 LGTVIVAFDSKGFHFSLNNTTDLIGKGVKSEDIIVKGSQGILKIQRSSTFLIGIILLIIT 204 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I++ L + A + +RDN+ A ++ I +L AF +S+A G+AG ++ + Sbjct: 205 VLIVMNLSDSRSGRAIKAVRDNRIATETVGINISKFRLLAFTISAALAGVAGVLYSHNLG 264 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F F+ +I V+ +V+LGGM ++ A +L + E +N Y Sbjct: 265 MLQPSKFDFNTSINVLVMVVLGGMGNIPGSIVAAIVLTILPEKMRFLNDY---------- 314 Query: 315 SFNMRHTTLMVIALFLVILM 334 + + L ++++ Sbjct: 315 -----RMIIYAVVLIVLMIF 329 >gi|218296917|ref|ZP_03497612.1| inner-membrane translocator [Thermus aquaticus Y51MC23] gi|218242797|gb|EED09332.1| inner-membrane translocator [Thermus aquaticus Y51MC23] Length = 356 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 116/306 (37%), Gaps = 35/306 (11%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + I+ ++A ++ G G +SL + + Y ILG GL WL Sbjct: 46 DPYWLRVLTLTAIFALYAASWDLLSGYTGQVSLGHAFFFGLSGYVSAILGRELGLPPWLT 105 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P+ A ++ G+ +GLPSL+ RG YL++ TL I ++ + IT G+ G+ R Sbjct: 106 VPLGASLAALAGVFVGLPSLRVRGPYLSLVTLAFPIIALGLVFVFPKITGGELGLSGLPR 165 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L YY+++ LS + L + I IR+ Sbjct: 166 LGQNRLQE--------------------YYIVVFTFLLSTLFLWKLGGSRIGLFLHAIRE 205 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + KL AF S+ F G+AG A + PD +I I + Sbjct: 206 DEVAVRMVGVNTVRYKLLAFGASAFFAGLAGGLHAHFLRVVGPDSLSVFNSIQPIVWSVF 265 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ T +L ++E + + LV+ Sbjct: 266 GGLATIYGPVAGTFLLFPLLEFLRVVEE---------------VRMVAFAFLILLVMRFL 310 Query: 336 SHSLLR 341 ++R Sbjct: 311 PQGVVR 316 >gi|167772146|ref|ZP_02444199.1| hypothetical protein ANACOL_03521 [Anaerotruncus colihominis DSM 17241] gi|167665944|gb|EDS10074.1| hypothetical protein ANACOL_03521 [Anaerotruncus colihominis DSM 17241] Length = 333 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 70/333 (21%), Positives = 141/333 (42%), Gaps = 29/333 (8%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K +IL +V L + KY+ ++ LIY + G+ +++G G++S Sbjct: 2 KKIRILRGTLLVTLALAAYLVLPNHLGKYMMTVMNSALIYFVVCLGIQVILGMGGMVSFA 61 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + +GAY+ I R GL I L + + +IS +++G+ L+ +G + +T+ + Sbjct: 62 AISFMGVGAYATAIFSMRAGLPILLSVAGAMVISALFALLIGMVLLRLKGTFFTFSTVAL 121 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 +I ++ W+ +T G GI G ++ + Y VLL Sbjct: 122 VQITYSVFNNWRAVTGGPDGIAGVPNFSIGGLQAKTSDQN--------------YLVLLT 167 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 L A +++ LR+T + A ++RDN+ A + + K++AF +++ F G+ GA Sbjct: 168 AAILCALVVVRLRKTNLGRALSSVRDNEIAAQVMGVNVYKTKVTAFVIAAIFAGLGGALM 227 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + + F F ++ + + +LGG+TS + T ++ + E + Y Sbjct: 228 THTNHFVGASSFTFDQSTTFVIMAMLGGVTSTPGVFVGTLLITMLPEWLKPLQEYI---- 283 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L+++ L L Sbjct: 284 -----------RLFYGLGVMLLMVFMPMGLAGL 305 >gi|51891939|ref|YP_074630.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51855628|dbj|BAD39786.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 341 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 15/280 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ + + LI + A GL+++ G G +S+ AIGA++ L ++ G+ W + Sbjct: 26 SWLVLLTNRALILAIAAIGLNLLTGFAGQISIGHAAFMAIGAFASYGLTAKVGIPFWGAL 85 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ +IS A G +G P+L+ +G YLAIATL IL WK ++ G G+ A Sbjct: 86 PLAGLISAAVGYALGFPALRLQGHYLAIATLGFGVAVPQILNLWKGLSGGWTGVKPAAPY 145 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++ + + + L + R A+ +RD+ Sbjct: 146 LYGLYFKEDRPYYYLILIALALLT---------------WVALNIARRRTGRAFIALRDS 190 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 A ++ ++ K +AFA+S+ + G+AG+ +A + I+P F + ++ + +I++LG Sbjct: 191 SVAAQAMGISLARYKTTAFALSAFYAGIAGSLWAHMMNYIAPHDFNLALSMELFTIIVLG 250 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 G+ S+ + + + + ++ S F Sbjct: 251 GLASVPGSIVGSLFMSLMPKAVERISLALQRSGAFDHSPF 290 >gi|75759905|ref|ZP_00739977.1| Branched-chain amino acid transport system permease protein livM [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492607|gb|EAO55751.1| Branched-chain amino acid transport system permease protein livM [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 340 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 128/334 (38%), Gaps = 31/334 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 22 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 81 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + + I + ++S I+GL SL+ + + A+ TL +S++F + Sbjct: 82 VALLFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + Sbjct: 142 EKWRGLTHGGDGFTFGVPEIFRDRF-------------------TFYYVSLVCLCFIFIL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 183 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVN 242 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + I+ + + Y Sbjct: 243 TTVFSIEMTLNALLMTMIGGVGTLIGAIAGSGIIESLKYYLSELATEY---------PIF 293 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R T ++ + +V+L+ L+ +R Sbjct: 294 ERWTIILGLLYIIVLLVFPKGLVGTVKKLKGFKR 327 >gi|323141504|ref|ZP_08076392.1| branched-chain amino acid ABC transporter, permease protein [Phascolarctobacterium sp. YIT 12067] gi|322414020|gb|EFY04851.1| branched-chain amino acid ABC transporter, permease protein [Phascolarctobacterium sp. YIT 12067] Length = 319 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 68/342 (19%), Positives = 133/342 (38%), Gaps = 41/342 (11%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K+D + V+ ++ L + + I I I ++ A L+++ G G S Sbjct: 4 IRKFDLKAIVACVIVFGIVQGLLFGEIIGPFWELNIILICINIILAVSLNLINGYTGQFS 63 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + A+GAY+ I+ + G+ + V+ + +G G ++GLP+L+ GDYLAIATL Sbjct: 64 IGHAGFMAVGAYTSAIMTVKLGMPFEAGLVVATLAAGLLGFLIGLPTLRLDGDYLAIATL 123 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + EI + ++ + G +G+ R+ T Sbjct: 124 GLGEIIRICILNIDYV-GGASGLMGIPRMTNFAYTF------------------------ 158 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + I + ++ IR+N+ A ++ K+ AF +AF G AGA Sbjct: 159 -WIMIAIIFFIKNFKNSSYGRCCLAIRENEIAADTMGINTTKYKVMAFTFGAAFAGTAGA 217 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F+ P F F + ++++V+LGG+ S++ +L + Sbjct: 218 LFSHYFFLAHPASFTFMRSFDILTMVVLGGLGSMTGAITGATLLTFISAYLSDY------ 271 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 + + + +++L R L + S + Sbjct: 272 ---------PEWRMIIYSVTMIILMLYRPQGLFGSKELSLKM 304 >gi|254250447|ref|ZP_04943766.1| ABC-type branched-chain amino acid transport system, permease component [Burkholderia cenocepacia PC184] gi|124879581|gb|EAY66937.1| ABC-type branched-chain amino acid transport system, permease component [Burkholderia cenocepacia PC184] Length = 347 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 119/298 (39%), Gaps = 12/298 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++ L S S+ ++L++ + A G ++++G GLLS I + +G+Y+ Sbjct: 32 LAVVAACVLPLVLSSG---SLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYAA 88 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 ++ +R S+ + + +A++ ++G S++ RG Y + TL ++F + Sbjct: 89 GLVLTRGVASVSVALLAAAVLGAVAAALVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTP 148 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ R + F P + Y + + ++L + Sbjct: 149 DVTGGDNGLLDIPRPA---------LAAFGHPLVALDSPWRYYGFVAVLFVAVFWLLLRV 199 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ IRDN+ + + KL+AF +S A G+AGA A Sbjct: 200 SRSVFGRTLLAIRDNEARAAAAGYDVKRFKLAAFVISGAVTGLAGALHALMTGIAPLSNI 259 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + +++ + ++GG +L A + + + + L + ++ Sbjct: 260 DYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRWLLLLGLVLIAVSLF 317 >gi|294676776|ref|YP_003577391.1| urea ABC transporter permease UrtA [Rhodobacter capsulatus SB 1003] gi|294475596|gb|ADE84984.1| urea ABC transporter, permease protein UrtA [Rhodobacter capsulatus SB 1003] Length = 658 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 100/325 (30%), Gaps = 26/325 (8%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 + L + A + IY + A GL+I G + ++++ +GAY+ + Sbjct: 355 VSLKVSAMQGADLTLDALSLASIYFLAAIGLAITFGVMRVINMAHGEFITMGAYT-GYVV 413 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT---LIMSEIFQNILIKWKP 142 ++ + I V+ ++ A G+ + +LA L+ S L + Sbjct: 414 QQFISDYTISIAVALPLAFAVTFAAGVAMERLVIRHLARRPLETLLASFGISIALQQLFK 473 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 G + + + V + + +L ++ Sbjct: 474 NIFGTQARPLTAP---------EWLDGALVLNDIVAISYIRIAIFVLALAFLGLFLLVMK 524 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 RT + R + N S+ + F + S G+AG S Sbjct: 525 RTRLGLEVRAVTQNPSMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLFAKVTSE--LG 582 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + V++GG+ ++ A++ G+ + +N + + F + Sbjct: 583 ADYIVQSFMTVVVGGVGNIWGTLAGAALVGGLQKGIEALNPANTLAAQTWMILFIIIFIQ 642 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 R ++ LR + Sbjct: 643 F-----------RPRGIIALRGRAA 656 >gi|188583092|ref|YP_001926537.1| inner-membrane translocator [Methylobacterium populi BJ001] gi|179346590|gb|ACB82002.1| inner-membrane translocator [Methylobacterium populi BJ001] Length = 347 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 128/315 (40%), Gaps = 16/315 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88 + T + + +++ I LI + GL++ +G G SL A+GAY+ +L Sbjct: 38 IPLTANDYWYNAILIPFLIMALAGLGLNLTMGYAGQASLGTGAFMAVGAYATYNLLLRLP 97 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L + + + +I+GA G+++GLPSL+ +G YL TL + + + + +N + Sbjct: 98 ELPLPVSLAGGGLIAGAVGLVVGLPSLRIKGFYLVAPTLAAQFLIEWVFNQVGWFSNDAS 157 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 ++ + + Y + L + + L + Sbjct: 158 SSAISAPRLVVLGH-------------DLSSPAGRYALTLTSVTVVTVLAWRLVHSQTGR 204 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENI 267 WR +RD + A + + KLSAF V +A G+AGA +A A + F + Sbjct: 205 NWRAVRDGETAAAVIGVPVARTKLSAFFVGAAVSGVAGALWAFAYLGTVDARSFDLDRSF 264 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + I+I+GG++SLS A ++ L ++ + L + L Sbjct: 265 QAMFIIIIGGLSSLSGSFIGAAFIVLTPILLAHLSNAFLGGSLD-GGQISNLQRILFGAL 323 Query: 328 LFLVILMRSHSLLRL 342 + ++ + L+ L Sbjct: 324 IIGFLIKEPNGLVAL 338 >gi|148270730|ref|YP_001245190.1| inner-membrane translocator [Thermotoga petrophila RKU-1] gi|147736274|gb|ABQ47614.1| inner-membrane translocator [Thermotoga petrophila RKU-1] Length = 356 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 130/361 (36%), Gaps = 47/361 (13%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 +L+ + + + + L L+L Y + I IY + A L+++ G G+ Sbjct: 4 KLSARTNFILTVVFLIFMALLLYLADRYMDSYKLRVVRLIAIYGIMAVSLNLINGITGIF 63 Query: 67 SLNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACG 107 SL IGAY+ + + + +++ Sbjct: 64 SLGHAGFILIGAYTASLLTLSPEQKAMSFIIEPIVPWLANVHTDFFTATVAGGVLAAVFA 123 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 ++G P L+ GDYLAIA+L +E+ + I + ITNG G+ Sbjct: 124 FLIGWPVLRLSGDYLAIASLGFAEVIRIIALNAIRITNGPLGLKGIP------------- 170 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 E + G F++ I L ++ A + IR+++ A ++ + Sbjct: 171 ------------EYSNIWWCYGWLFVTVLFIASLVNSSYGRALKAIREDRIAAEAMGINV 218 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIA 285 +L +F + + F G++G+ +A I P V+ +++LGG+ S+S Sbjct: 219 FKHQLLSFVIGAFFAGVSGSLYAHWLTTIDPRTTTLGPMLTFYVLIMIVLGGLGSISGSL 278 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 A+ + E + + + ++ LV++ ++ Sbjct: 279 IGAALFAILFEWLRDLEEPFTFFGIHVP-GIKGMRILVISAIFILVMIFWQRGIMGREEL 337 Query: 346 S 346 + Sbjct: 338 T 338 >gi|326389661|ref|ZP_08211227.1| inner-membrane translocator [Thermoanaerobacter ethanolicus JW 200] gi|325994376|gb|EGD52802.1| inner-membrane translocator [Thermoanaerobacter ethanolicus JW 200] Length = 331 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 136/323 (42%), Gaps = 30/323 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V L+ L + + LIY + A GL++++G G +SL A+GAY Sbjct: 10 IVLILIATLIPPILNLPGSLQYLLDLSLIYAIVAIGLNLLMGYAGQISLGHGAFLAVGAY 69 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L + ++ + +S +I+G G+++G+P+LK G+YLAIATL I Sbjct: 70 TSAYLTLTLHVPFFIALILSGLITGIVGILLGIPALKLEGNYLAIATLGFGVAVTQIFAI 129 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W T G +GI F + YY++L + + + Sbjct: 130 WTSFTGGFSGIKPLKPELFGFKF---------------NSYLSYYYIILILTIVLVILTW 174 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + RT + + +RD++ A ++ + + K AF +S+ + G+AG+ +A ++P Sbjct: 175 NIIRTKVGRSLMAMRDSEIAAKAMGINVSYYKTLAFGLSAFYTGIAGSLYAHLLGFMTPY 234 Query: 260 MF--KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + ++ ++++++GG+ ++S I+ + ++ + Sbjct: 235 DYAFSIGMSLNFLAMIVIGGIGTISGSIIGAIIMTWIPQITSNL-------------PIK 281 Query: 318 MRHTTLMVIALFLVILMRSHSLL 340 + + V++ + + Sbjct: 282 SLSQIITGAIIIAVVIFYPNGIA 304 >gi|254562767|ref|YP_003069862.1| branched-chain amino acid ABC transporter permease/ATP-binding protein [Methylobacterium extorquens DM4] gi|254270045|emb|CAX26031.1| putative branched-chain amino acid ABC transporter, permease/ATP-binding protein [Methylobacterium extorquens DM4] Length = 617 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 113/330 (34%), Gaps = 29/330 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ +L V L+ + +G + Y ++ + L+Y A + ++ G LG+L+ Sbjct: 5 RRLSLILLVALAALVAVAVGPSLLDTYSVNVLTRSLLYAAVALTVDLLWGFLGILTFGQS 64 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + +A GAY+ ++ + S + + G + + A A Sbjct: 65 VFFACGAYAAGLVFTHMDFSGSNALVALGLGIGGALLT-AAIVGWLAFWHGASALYASVI 123 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 ++ + + +G + L + S+ +F SF++ + +V + Sbjct: 124 TLVLPIVATQLLYSGGTFTGSSSGLSGFTSFDLSVEAWFWLAGSFLVVVTTLAFVFVM-- 181 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + IR+N++ L K+ + V +A +AG +A Sbjct: 182 ------------SDAGRLLVAIRENEQRCKYLGLDTSRLKIVVYLVCAAIAALAGYLYAG 229 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ++P++ F ++ LGG +L I+ + Sbjct: 230 YAMVVAPELASFVFGTELVIWTALGGRGTLLGPVFGALIV--------------DYESAQ 275 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 S+ ++ + LVI+ LL Sbjct: 276 LSGSYPFVWQLIIGVVFVLVIVAFPRGLLP 305 >gi|163731537|ref|ZP_02138984.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] gi|161394991|gb|EDQ19313.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] Length = 399 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 63/381 (16%), Positives = 135/381 (35%), Gaps = 37/381 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGAT-------KSQKYIDSMGIQILIYVMFAWGLSIVV 60 L K D L L+ + L + + +++I+ +FA G +I+ Sbjct: 4 LTKKDATLLLIVACLTMFAPFILNPFPEGSAMAQFNAGYPDLMQRLVIFGIFAIGFNILF 63 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G LS +G+Y+ + + +++ I +S +++G +++G SL+ G Sbjct: 64 GLTGYLSFGHAAFLGVGSYAAIWMMKLLTMNVIPAIMISVLVAGLFSLLVGWISLRRSGI 123 Query: 121 YLAIATLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS----- 174 Y +I TL +++ ++ PIT G+ G+ + V R Sbjct: 124 YFSILTLAFAQMSYSLAYSVLTPITGGETGLQPKINDPRIIDRVFGADGTERANFFGLEM 183 Query: 175 ---------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 S+V YY+ + L+ + + + R+ R ++ NQ+ Sbjct: 184 GASYEMTVGSWVFTFNAGYYIAAFVMLLAFYLSIRIFRSPFGMMLRAVKSNQQRLNYTGL 243 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 L+AF +S + G+AG A ++ + ++ + V+ + ILGG +L Sbjct: 244 NAKPYTLAAFVISGMYAGLAGGLLVAMDTQVGAERMFWTASGEVVLMTILGGAGTLIGPV 303 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVI 332 + + + +N F + + +V+ Sbjct: 304 LGAGFIKYMENIVSKINKTVLEQWFAFMPDGIEDFIITIVYPFVGKGWHLTLGLLFMMVV 363 Query: 333 LMRSHSLL--RLRTPSNFLER 351 + L+ + F + Sbjct: 364 IFLPGGLVQGGQKVAGLFRRK 384 >gi|299069074|emb|CBJ40326.1| ABC transporter, permease protein (N-ter) and ATP-binding protein (C-ter) [Ralstonia solanacearum CMR15] Length = 608 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 115/309 (37%), Gaps = 20/309 (6%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L++ + + LL L ++ ++ I +Y + A GL ++ G GL S Sbjct: 17 LSRNRLLTAAFVIGLALLPVLPTP-----EFWITLLNYIGLYSLVALGLVLLTGVGGLTS 71 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +GAYS L ++YGLS W+ + I+ ++GL +++ G YL +AT+ Sbjct: 72 FGQAAFVGLGAYSTAYLSTQYGLSPWIGLLAGLAITVVSAYVIGLITMRMSGHYLPLATI 131 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + + G+ L+ + M+Y++ Sbjct: 132 AWGLSLFFLFGNLEFL-GKYDGLNGIPVLH--------------LLGKPLQTGREMFYLI 176 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++ + L + A R ++ ++ + K+ F ++ ++G Sbjct: 177 WAVVVVAVLAVQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVAAAILACISGF 236 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + ++P F + I + + ++GG+ + +L + + + Sbjct: 237 LYAHLQRAVNPTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDTLQNLLPKLLG 296 Query: 308 SLLKFDCSF 316 S F+ Sbjct: 297 STGNFEIIV 305 >gi|111021853|ref|YP_704825.1| ABC amino acid transporter, ATP-binding [Rhodococcus jostii RHA1] gi|110821383|gb|ABG96667.1| ABC amino acid transporter, ATP-binding [Rhodococcus jostii RHA1] Length = 607 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 113/295 (38%), Gaps = 30/295 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + I + GL++ +G G L+L YA GAY+ ++ Sbjct: 27 PEFGLDFALSRQVQLACILALVVSGLNLGLGYAGELALGQAAMYAAGAYTAGLMSIAGYT 86 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I L + S +++ A G++ G+P L+ LA+ + + + +I+ + T G+ G+ Sbjct: 87 DIVLQLIASGVVALAVGIVTGIPGLRLGSWSLAMTSFFLVLLVPDIIAVFGDTTGGRNGL 146 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + G V S Y V++ + L +++ L + A+ Sbjct: 147 SGIEPATLFGEVVDSDR---------------FYMVVVIVAILWFAVMRNLVVSRHGIAF 191 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 RT++ + S+ ++ KL +A+ + G+AGA FA +SP+ F F+ V+ Sbjct: 192 RTLKQSPVLASSVGISVFRMKLLGYAIGAFPAGLAGALFANIDMYVSPEAFGFTFATAVL 251 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + ILGG TS+ A AI+ F Sbjct: 252 AACILGGATSVYGAAVGAAIMQLGPN---------------QSSEFQQYALVFYG 291 >gi|319784907|ref|YP_004144383.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170795|gb|ADV14333.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 326 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 127/316 (40%), Gaps = 22/316 (6%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL------- 90 Y LI+ + GL++ G GL ++ AIGAY+ +L + Sbjct: 6 YGAFFLTTALIFSLVTLGLNLQWGLTGLFNVGLAGFVAIGAYTSALLTTPDDAARLGGLG 65 Query: 91 -SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 I + + ++ G + G+ +L+ R DYLAI T ++ + Q + + + +T G G Sbjct: 66 LPIVVGWAGAMVVGGIAAALTGMATLRLRSDYLAITTFGVAVVVQLVALNAQKLTGGPFG 125 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 I R F + +++ + V+ + ++ + L R+ Sbjct: 126 IGFIPRP------------FGSLAETPLLFNLSNLAVVAAVTLVAYFALEHLSRSPWGRV 173 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + +R++++A SL + F ++ AFAV A + +AGA A I+PD + V Sbjct: 174 LKALREDERAAISLGKSARFYRVQAFAVGGAIMALAGALQAHFTGFIAPDNYLPILTFQV 233 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++I+GG S + ++ + + F + + + L Sbjct: 234 WVMLIVGGSGSNLGAVVGSILVWAIWAGSGTLTSILFP--PEQQARAAALQIAAIGVMLC 291 Query: 330 LVILMRSHSLLRLRTP 345 +++L+R + L R Sbjct: 292 VILLVRPNGLFGDRPR 307 >gi|299066355|emb|CBJ37539.1| putative high-affinity branched-chain amino acid transport system permease (livH or livM) [Ralstonia solanacearum CMR15] Length = 550 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 76/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 276 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFRNYFPAAFDWYLPAALPAAFLAAAVVGFV 335 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 336 LER--TVLRHLHGRPLETLLATFGVSLLLMQAVRSLFGAQNVEVANPSWMSGGIALYPGL 393 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + A L RT + R N+ + AFA Sbjct: 394 ILPYNRLVILAFALVVVALAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 453 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ I V+LGG+ L+ L + + Sbjct: 454 GAGIAGLGGC--ALSQIGNVGPDLGQGYIIDSFMAVVLGGVGQLAGTIVGAFGLGLINKC 511 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R L L+ S Sbjct: 512 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 549 >gi|171780212|ref|ZP_02921116.1| hypothetical protein STRINF_02000 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281560|gb|EDT46995.1| hypothetical protein STRINF_02000 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 317 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 134/340 (39%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L VV +L L Y + + I I ++ G ++V+G G +L Sbjct: 6 KLNLSWLALIVVLFGILELLAKTNILNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ + + + V +I+ ++ G+P+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYATAIITQQNPTYGGFYFSMLVGVVIAVLVALVFGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M+EI + +++ +TNG AG+ V+ Sbjct: 126 GMAEIIRIVIVNGGEVTNGAAGLTGILPYTSWP-------------------------VI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 +IL R++ +R+++ A ++ + K+ F + + +AG+ Sbjct: 161 FIFVAGITVLILNFLRSSTGRQVIAVREDEIAAEAMGVNVTKMKVMIFVMGAIISAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + P F ++I + I +LGG+ S++ A +L + + Sbjct: 221 LYVGYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTILAAIVLGILNMFLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL + + Sbjct: 275 ---------SNLRMIIYSLALILVMIFRPGGLLGTKEFTL 305 >gi|46581146|ref|YP_011954.1| high-affinity branched chain amino acid ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|46450567|gb|AAS97214.1| high-affinity branched chain amino acid ABC transporter, permease protein [Desulfovibrio vulgaris str. Hildenborough] gi|311234822|gb|ADP87676.1| inner-membrane translocator [Desulfovibrio vulgaris RCH1] Length = 358 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 137/364 (37%), Gaps = 38/364 (10%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + L ++ LL+ +Y +++ + I I ++FA L+IV G +G S Sbjct: 2 RNYTLNIVLAALCLLVVGLSQFGVLDQYSETVLMFIGINIIFAASLNIVNGYMGEFSCGH 61 Query: 71 VIAYAIGAYSYVILGSRYGLS-----------------IWLLIPVSAMISGACGMIMGLP 113 +GAY +L + ++I + ++ G+++ LP Sbjct: 62 AGFMCVGAYVSSLLSVTLFTNNKLLGAALLPPELAPLLFPVVIAIGGFVAAGFGLLVALP 121 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 S + RGDYLAI T+ + I +++ + I G G + ++ + + Sbjct: 122 SFRTRGDYLAIITIAANYIVISLIENLEFI-GGPRGFHGMKKVINGMRDLADIPWM---- 176 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 +L S ++ L + + ++ A ++ KL+ Sbjct: 177 ----------LIWVLLGTLFSLWLLRRLVTSTYGKGISAVCQDEVAAEIMSVDTNHIKLT 226 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF VSS G+AG +A ++P F ++ + +V LGGM SLS + + Sbjct: 227 AFMVSSGLAGVAGGLYAHIFGYVNPQAFNILKSTEGLVMVYLGGMASLSGSVMSAILFTL 286 Query: 294 VVELCCGMNFYYFNSLLKFDCSF------NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 ++E + + L + ++ + L L++ R ++ R S+ Sbjct: 287 LIESLRFVIPGLDSVLHSVGLLPDGYELSQIWKWVIIPLILILLMQFRPEGIMGNRELSD 346 Query: 348 FLER 351 + Sbjct: 347 VFPK 350 >gi|119357485|ref|YP_912129.1| ABC transporter related [Chlorobium phaeobacteroides DSM 266] gi|119354834|gb|ABL65705.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Chlorobium phaeobacteroides DSM 266] Length = 629 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 117/304 (38%), Gaps = 17/304 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + K+ + + +Y + GL VG LG ++L + +GAY Sbjct: 20 ILLFTGLALFPSIWQGKFALGLLTLMAVYGILLIGLDATVGYLGQVNLAQAALFGLGAYG 79 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L + + +++ + G+ + LP+L+ G A++TL + + +L + Sbjct: 80 A-ALAVQADAAFPVVLLAGITAALLPGVALALPTLRLEGPQFALSTLSFATLSVIVLNEA 138 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + ITNG G+ + F + Y++ L + ++ S Sbjct: 139 ESITNGALGLSITRPA----------------LFGFSLDATGFYWLCLIILAITWSASQS 182 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L ++ A +RD+ A +L + K AFA SA G+AGA A + + P Sbjct: 183 LLKSRFGLAIEALRDSPIATDALGIGTLRHKALAFAWGSALAGLAGALHALNFGYLQPAA 242 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + +I++ V+ GG S ++ + L F+ + F + Sbjct: 243 FGYDLMVILLLGVVFGGRRSQWGSFTGALVIAMLPNLLSNRTFFSSLAAAGFVIALIPVI 302 Query: 321 TTLM 324 TL+ Sbjct: 303 RTLL 306 >gi|260222166|emb|CBA31459.1| hypothetical protein Csp_F37640 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 323 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 31/328 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L V LL + A ++ ++ +I I+ + A L++++G GL+S Sbjct: 19 AALPVFLVLLALPQITAALHAEFYVTLATRIAIFALAASSLNLILGFGGLVSFGHAAFVG 78 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ IL + + + P + ++S ++G SL+ +G Y + TL +++ Sbjct: 79 AGAYTVGILMQQGTVPAAIAWPAAMLVSAGLACLIGFISLRTQGVYFIMITLAFAQMLYY 138 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + K G G+ +A R + + + +YY+ LG L Sbjct: 139 LAVSLKA-YGGDDGLPLAGRNTW---------------AGIAPDDTALYYLALGALTLCL 182 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 L + +R+N +L ++ +L+AF ++ A G+AG A Sbjct: 183 LFTQRLLNARFGQVLQGLRENPVRMQALGFPVLRTQLTAFTLAGAMAGLAGTLLANQGGF 242 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +SP M ++S++ +++ +VILGG+ L A + + E+ ++ Sbjct: 243 VSPSMMQWSQSGMLMVMVILGGVGHLYGGVLGAAAFLLLEEVLGHTTEHWQLG------- 295 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLR 343 + L V+L+ L LR Sbjct: 296 --------LGAMLLAVVLLAPRGLASLR 315 >gi|86609531|ref|YP_478293.1| hydrophobic amino acid ABC transporter permease [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558073|gb|ABD03030.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 319 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 74/322 (22%), Positives = 132/322 (40%), Gaps = 26/322 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88 Y I + IY + GL+I G G+ ++ +A+GAY+ I+ + + Sbjct: 3 SYGIFFLILVGIYGVLVLGLNIQWGYAGMFNIGVGAFFAVGAYASAIVTTPPSAEHLGGF 62 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L W+ ++ ++GA ++GL +LK R DYLAIAT+ ++EI IL +TNG Sbjct: 63 NLPFWVGFAIAVAVAGAIAFLIGLITLKLRSDYLAIATIGIAEIISQILRNEGWLTNGVR 122 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 GI R + + + + ++L + + R+ Sbjct: 123 GITRIPRPFRGWIPGQDTLLYLG--------------LVLVILAVVYWAAERAYRSPWGR 168 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE-NI 267 R IR+++ A + ++ +L AF + S +G+AGA +A + ISP+ F+ Sbjct: 169 VLRAIREDEPATLAAGKDVLQFRLQAFVLGSMLMGLAGALYAHFVNFISPEAFQPEFATF 228 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 IV ++I GG + ++ GV + + +++ Sbjct: 229 IVWVMLIAGGSGNNRGALLGALVIWGVWSGSEWLTNRLPPQWATRAGPLRILLIGILLQV 288 Query: 328 LFLVILMRSHSLLRLRTPSNFL 349 + L RS LL R P L Sbjct: 289 ILLT---RSQGLLPERPPKPVL 307 >gi|320547326|ref|ZP_08041617.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus equinus ATCC 9812] gi|320448024|gb|EFW88776.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus equinus ATCC 9812] Length = 317 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 70/340 (20%), Positives = 135/340 (39%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L VV +L L Y + + I I ++ G ++V+G G +L Sbjct: 6 KLNLSWLALIVVLFGILELLAKTNILNLYYLQILMGIGISILMGLGTNLVLGFSGQFTLG 65 Query: 70 CVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAYS I+ + + + V +I+ ++ G+P+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYSTAIITQQNPTYCGFYFSMLVGVVIAILVALVFGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M+EI + +++ +TNG AG+ V+ Sbjct: 126 GMAEIIRIMIVNGGELTNGAAGLTGILPYTSWH-------------------------VI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + +IL R++ +R+++ A ++ + K+ F + + +AG+ Sbjct: 161 FIFVAVITVLILNFLRSSTGRQVIAVREDEIAAEAMGVNVTKMKVMIFVMGAIISAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + P F ++I + I +LGG+ S++ A +L + + Sbjct: 221 LYVGYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTILAAIVLGILNMFLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL + + Sbjct: 275 ---------SNLRMIIYSLALILVMIFRPGGLLGTKEFTL 305 >gi|295111031|emb|CBL27781.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Synergistetes bacterium SGP1] Length = 299 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 124/309 (40%), Gaps = 40/309 (12%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y + + I ++ A G+S+ G G+ +L AIGAY+ IL Y + I Sbjct: 5 YASGVVTLLAINLIAALGVSLFTGFTGIFTLGHAGYMAIGAYTAAILTVEYEVHFAAAIL 64 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++S ++GLP+LK GDY AI +L + E + I+ W +T G G D Sbjct: 65 AGGVLSMVLAYLIGLPTLKLVGDYYAIVSLGLGEAIRLIIENWNSVTRGARGYPGIDNYT 124 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + V + + ++ +L + A++ RD+ Sbjct: 125 SMT-------------------------VAVSFFLVLCVLMFFLINSRYGRAFKACRDDY 159 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A L ++ + A+S+ + G+AGA A I P MF ++ ++SIV+ GG Sbjct: 160 VAASLLGFNTAHFRVLSLAISAFYCGVAGALLAGYMSFIQPVMFDQVKSTELVSIVVFGG 219 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S S T IL V EL ++ Y + L L++++R Sbjct: 220 LGSTSGCLIGTTILTLVTELFRPISQY---------------RMLVYGAVLVLIMVLRPE 264 Query: 338 SLLRLRTPS 346 ++ + Sbjct: 265 GIMGTNELT 273 >gi|160914595|ref|ZP_02076809.1| hypothetical protein EUBDOL_00602 [Eubacterium dolichum DSM 3991] gi|158433135|gb|EDP11424.1| hypothetical protein EUBDOL_00602 [Eubacterium dolichum DSM 3991] Length = 319 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 139/341 (40%), Gaps = 43/341 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +K + L + +++ + + Y + I I ++ A L++++G G S Sbjct: 5 FSKTNLCWLLTIIGIFVIMSIAMQTGIINAYYQTTIYTIGINIILAVSLNLIIGVTGQFS 64 Query: 68 LNCVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L IGAY+ I+ + + + L + A IS +I+ +P+L+ +GDYLAIA Sbjct: 65 LGHAGFMCIGAYAAAIVTKSNPTLMGLALGAIIGAAISAVVALIVAIPTLRLKGDYLAIA 124 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL SEI + +++ F I ++ + Sbjct: 125 TLGFSEIVRIVVLNMTITNGAA--------------------------GLFGIPKLTSWP 158 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 VL G LS +IL +A A +IR+++ A ++ K AF + + +A Sbjct: 159 VLFGCIVLSMIVILNFGLSAPGRACISIREDEIASEAMGINTTKYKTIAFVIGAMIAALA 218 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA +A + + PD+F +++++ ++ +V+ GGM S + A ++ + Sbjct: 219 GALYACNFYVVKPDLFTWTKSVDILILVVFGGMGSFTGSVLAAIVIGFINMFLQ------ 272 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 F + AL L+++ R + + + Sbjct: 273 ---------QFADIRMIIYGAALVLIMVFRPKGIFGTKEFT 304 >gi|160895480|ref|YP_001561062.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160361064|gb|ABX32677.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 345 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 75/331 (22%), Positives = 136/331 (41%), Gaps = 17/331 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L L + Y + + I V A GL+I+ G GL+SL +GA Sbjct: 24 IWLAMAGALLLLFPFMASDYWLYLACLVSINVAGATGLNILTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ I+ +R+G + + ++ G+++GLPSL+ +G YLAIAT+ S I + Sbjct: 84 YTVAIVQARWGTPVLFNLLAGGFVAMLGGIVVGLPSLRVKGLYLAIATIAASFIAHFLFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G AG+ + F S +Y+V++ + L Sbjct: 144 NL-RLTGGTAGLTLQPATVFGVALDTSFR---------------LYWVIVPVTLLMLLGA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT I A+ IRD + L ++ KL +F +SS + G+AG +A ++P Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++ +I+GGM S+ + V EL + + + Sbjct: 248 ESFPLLMSIFFLAAIIVGGMGSILGGILGAVFMTMVPELLKLIVD-LLPGGSELAVFLSP 306 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 T + + + + ++ L ++ Sbjct: 307 VRTMVFGLLIIVFLVFEPQGLAQMWRRLRRF 337 >gi|55377665|ref|YP_135515.1| high-affinity branched-chain amino acid transport protein [Haloarcula marismortui ATCC 43049] gi|55230390|gb|AAV45809.1| high-affinity branched-chain amino acid transport protein [Haloarcula marismortui ATCC 43049] Length = 460 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 68/383 (17%), Positives = 132/383 (34%), Gaps = 50/383 (13%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + + +V + + A + +I S+ + I Y + A L++ G GL ++ Sbjct: 56 FIASIWAVMLVLAIAVGGANWANLAAGFIGSVTVLIGGYAILALALNLQWGYTGLFNIGI 115 Query: 71 VIAYAIGAYSYVILGSRYGL----------SIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 A+GAY+ +L + +W+ + ++ G + LP+L+ + D Sbjct: 116 AGFMAVGAYTTAVLTAPTDPAAGAVPGLGLPLWVGLIGGMAMAAIIGGLAALPALRLKAD 175 Query: 121 YLAIATLIMSEIFQNI----------LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 YLAI T+ SEI + + L T G GI T + + + Sbjct: 176 YLAIVTVAFSEIIRLVVNWNGLAEVSLFGVPFGTGGATGISFKSANEVASTLINGVGQPL 235 Query: 171 RFPSSFVIYEIFMY------YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + V +LL + S ++ + + + IR+++ SL Sbjct: 236 VTAAEGVGVSGPNLANLTYGILLLLVVAASYWVLARITNSPFGRVLKAIREDETVTQSLG 295 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 K+ F + A +G+AG F +SP F+ + V + +I+GG S + Sbjct: 296 KDTRRFKIKTFMIGCALMGLAGVLFRGQAGYVSPQQFRPTITFYVFAALIIGGSGSNTGS 355 Query: 285 AKATAILIGVVELCCGMNFY------------------------YFNSLLKFDCSFNMRH 320 A G++ L + + Sbjct: 356 IIGAATFSGLLFYLPARLGENVSLGGTRAPSNIVDAIAGLGSLDPLPLLAYTISNVSTLR 415 Query: 321 TTLMVIALFLVILMRSHSLLRLR 343 L+ + L +I + LL R Sbjct: 416 FVLIGVVLIYIIQNQPDGLLGHR 438 >gi|221215295|ref|ZP_03588260.1| ABC branched chain amino acid family transporter, fused ATPase and permease [Burkholderia multivorans CGD1] gi|221164727|gb|EED97208.1| ABC branched chain amino acid family transporter, fused ATPase and permease [Burkholderia multivorans CGD1] Length = 597 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 109/326 (33%), Gaps = 29/326 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L L+ + + Y+ ++ I+ L + I+ G +G+L+ + + Sbjct: 15 ALIGCLLSLVVVAVAPFMLDTYLTNILIRTLFLAAVVMTVDILWGYVGILTFGQSAFFGL 74 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ ++ + +G + A+ GA ++ + + A Sbjct: 75 GAYACGLIFTHFGFGPGWALAALALAMGAAALLAAG-TGWLAFFHGASPLYASIITLALP 133 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ + I +G + L T L +F F++ ++L+ Sbjct: 134 IVLTQVIYSGGNFTGSSSGLSGFPTYYWELEVWFWIAGGFLVLTTTGGWLLV-------- 185 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 R+ IR+N++ L + K +S+ +AG +A + + Sbjct: 186 ------RSDFGRVLVAIRENEERCAYLGIPVSRIKTMLMILSAMVASVAGFGYAVFSNVV 239 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P++ F ++ LGG +L A + + G + + Sbjct: 240 APELAGFQLGTELLIWTALGGRATLLGPVFAAISIDTMSSWLSGALPFLWK--------- 290 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 L IA LVI++ L Sbjct: 291 -----LLTGIAFVLVIVLLPRGFAPL 311 >gi|313885447|ref|ZP_07819197.1| branched-chain amino acid ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619177|gb|EFR30616.1| branched-chain amino acid ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] Length = 322 Score = 99.2 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 84/344 (24%), Positives = 147/344 (42%), Gaps = 43/344 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R+N+ + I LL V +LF A Y + I++ +++A GL++V+G G Sbjct: 3 RMNRKNGIWFLLIVAAFAILFALTQANIINAYYRITLMTIMLNIIYAVGLNLVLGIAGQF 62 Query: 67 SLNCVIAYAIGAYSYVILGS---RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 SL AIGAY+ I L + I + +IS +++G+P+L+ +GDYLA Sbjct: 63 SLGHAGFIAIGAYAAAICTKAAANPWLGLLEGILLGVVISVIVALLVGIPTLRLKGDYLA 122 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 IATL ++EI + ++ W+ ITNG AGI + Sbjct: 123 IATLGVAEIIRVLINNWRSITNGPAGISGIP-------------------------TVTN 157 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 + V+ L+ ++L +++ A R I N+ A ++ + K+ AFA+ +A Sbjct: 158 WMVVFVALVLTTILVLNYNYSSVGRATRAIEQNEIAAEAMGVNVTKYKVMAFAMGAATAA 217 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 + G+ A ++P + F+ +I ++ IV+ GGM S + A Sbjct: 218 IGGSLQATFLGIVTPKDYTFNRSIDILIIVVFGGMGSFTGSFIAAI-------------- 263 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L F + + +AL L+++ R LL Sbjct: 264 -LLGLLNLFLQDYGQLRMIIYAVALILIMIFRPQGLLGTSEFKV 306 >gi|292654059|ref|YP_003533957.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] gi|291369834|gb|ADE02062.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] Length = 648 Score = 99.2 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 70/326 (21%), Positives = 127/326 (38%), Gaps = 15/326 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A V LL+ L Y ++ ILI+ +FA L +V+G GL+SL + Y +GA Sbjct: 303 AGVGALLVVPLLAEVTGVTYSVTLLEDILIWALFALSLDLVLGYAGLVSLGHTLFYGVGA 362 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ V+ S+++ + V+ + A +G S++ G + A+ TL +E+F N + Sbjct: 363 YASVLTLMHLSPSVFVALAVAVAVCAAIAWGVGYLSIRVSGVFFAMITLGFAELFYNAVF 422 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K+ V G V + YY LL + S + Sbjct: 423 KFDFTGGPDGLFGVDAFYGLAGLGVDPGEFAVPLGPFVHDGGVVQYYFLLAVVVGSYLLA 482 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R + ++IR++++ + + K AF VS G+AG FAA ++P Sbjct: 483 RRLIRAPFGSVLQSIRESEERASFIGYDVTAYKRRAFVVSGGLAGVAGGLFAADNGYVAP 542 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + VI + +LGGM +L + + ++ + Sbjct: 543 SFLHWINSGEVIVMTVLGGMGTLYGPMLGAGVFVAAEDVLSSYIDQW------------- 589 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRT 344 + + L ++ L+ L Sbjct: 590 --QLVTGVLFVLFVIFVPRGLVSLSR 613 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 105/297 (35%), Gaps = 27/297 (9%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIPVSAMISGA 105 ++YV+ A GLSI+ G + +++ +A+GAY ++ I G G W+ + V+ ++ G Sbjct: 1 MVYVLLAAGLSIIFGVMDVINFAHGEQFALGAYFAFAIAGPLGGAGFWVALVVAPLLVGV 60 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 GM + ++K + ++++ I+ GK+ Sbjct: 61 VGMGIERLTVKRLYGRDPLYHILLTFGLVLIVNDLITSAWGKSAQPFPIPPILDQP---- 116 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 Y ++ Y +++ L+ L L RT R ++++ +L Sbjct: 117 ------VALFGFNYSLYNYGIIVFGSALALGTWLLLNRTRFGMIIRAGSEDREMVRTLGI 170 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 I F +A G+AG A ++ S I IV+LGG+ S Sbjct: 171 DIDRYYTLTFGFGAALAGVAGIVLGAYQNV--SPTMGSSVIIPAFVIVVLGGLGSFRGAV 228 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + V + ++ + + V++++ L Sbjct: 229 VGGLFVGLVQTFARTYAPFLEG--------------LIVFLLMISVLVVKPTGLFGT 271 >gi|118431403|ref|NP_147858.2| ABC transporter, permease protein [Aeropyrum pernix K1] gi|116062727|dbj|BAA80295.2| ABC transporter, permease protein [Aeropyrum pernix K1] Length = 345 Score = 99.2 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 120/315 (38%), Gaps = 19/315 (6%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 KY ++ + ++I+ + A GL+I +G G +SL IGAY+ G++ Sbjct: 37 PFVIGKYYLNLLVVMMIFWIAAIGLNITLGLAGQISLAHAALMGIGAYTVANAALHLGVN 96 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 ++P++ + + G+I+ LPS + + YLA+A+L I + + + Sbjct: 97 SVAILPIAGLAAALLGIILSLPSFRLKEYYLAMASLAAQLILEYVYSRID---------- 146 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + +YY +L + + A + R+++ A + Sbjct: 147 -------PDQYTPVPPETKTLLGISLTEPTALYYFILAITVVMALAAANIGRSSLGRAMK 199 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RDN A ++ + K +AFA+ + G+AG +A I + F +I ++ Sbjct: 200 AVRDNDVASEAIGINVQLVKATAFAIGGFYAGVAGGLYAIYSSGIGWEGFTLVNSIELLG 259 Query: 272 IVILGGMTS-LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +V++GG + ++ + + + ++ + Sbjct: 260 MVLIGGPGRVVWGSLLGVLVMRTGWTMMESTITPLLAG-IGLSIIASSAKYIVLGFLIVA 318 Query: 331 VILMRSHSLLRLRTP 345 I+ L+ + Sbjct: 319 FIIAEPEGLIAVLRR 333 >gi|296453276|ref|YP_003660419.1| inner-membrane translocator [Bifidobacterium longum subsp. longum JDM301] gi|296182707|gb|ADG99588.1| inner-membrane translocator [Bifidobacterium longum subsp. longum JDM301] Length = 327 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 122/313 (38%), Gaps = 8/313 (2%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + YV+ A GL+I G GL+++ +GAY + I G +++ + + Sbjct: 15 IAPTTAAYVLAAIGLNIHFGMTGLMNMGQAGFMLLGAYGFAI-TQSMGCNLFASVCAALA 73 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159 ++ +++G+P+LK DYLA+ TL +EI + + T G AGI D Sbjct: 74 LAVIYALLLGIPTLKLGPDYLAMVTLAAAEIIRIVGRSTAMTNFTGGSAGISPQDFTEKF 133 Query: 160 ----GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 S S+ + ++ V + ++A + + + IR+ Sbjct: 134 EALSPLPDGSTTFLLWTYSNNIANSWWLRIVAWILVAIAAFLCWRWFHSPWGRMLKGIRE 193 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A SL + K+ + + F MAG F + PD + V +I++L Sbjct: 194 DENAIRSLGKPVTKYKMESLILGGLFGAMAGIIFVLP-RSVQPDSLGRTVTFYVWTILLL 252 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ + +L ++ + L ++ +AL +++ R Sbjct: 253 GGAATILGPVLGSCVLWVLLTFVKEVMRNTVPETLISSNQIEALGWVIVGVALMCLVIFR 312 Query: 336 SHSLLRLRTPSNF 348 LL R F Sbjct: 313 PQGLLGDRKELAF 325 >gi|167005616|ref|ZP_02271374.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 351 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 135/355 (38%), Gaps = 47/355 (13%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + ++F+F+ Y ++ QI I+++ A +++ G G SL AIG Sbjct: 11 LIFLIASIVFIFVSPYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 70 Query: 78 AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 AY+ + + + + S L + V+ + S +I+ + Sbjct: 71 AYAAALVLLSADAKNDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRV 130 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL I + I + ITNG G+ + Sbjct: 131 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 170 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 Y G+ ++ +IL + + A + IRD++ A ++ + K AF+ Sbjct: 171 -----TIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFST 225 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+ G+ G A +SP F F ++ I++LGG+ S + ++IG E Sbjct: 226 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEW 285 Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ SL S + I L LV+L ++ S+ + Sbjct: 286 LRFLDELNIKIDSLNLDIQSMPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 340 >gi|113867430|ref|YP_725919.1| ABC-type transporter, permease component [Ralstonia eutropha H16] gi|113526206|emb|CAJ92551.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 365 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 124/309 (40%), Gaps = 26/309 (8%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYGLSIW 93 S K+ + +++I +FA L +++G GL+SL +A+ AY+ IL + W Sbjct: 42 SNKFYIELLSKVMIMAIFALSLQLLIGYTGLVSLGHAAYFAMAAYATAILAPQAGPGNGW 101 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 LL+ + S +++G L+ RG Y + TL +++ + I G G Y+ Sbjct: 102 LLLAGALTASALLALVVGALVLRTRGVYFIMVTLAFAQMVYFVFHD-TNIAGGSDGTYIY 160 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 R F V Y+++ L+ +++ + R+ +A I Sbjct: 161 FRPEFPVP---------GEHLLTVNDPTHFYWLVWLGLVLTVAVLALVLRSRFGHALVGI 211 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R N++ + +L AF G+AG +A ++P++ + ++ + +V Sbjct: 212 RHNEQRMRAAGYATYRYQLGAFVAGGMLAGLAGFLYAIQFGFVNPEIASWHQSGNAMLMV 271 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ILGG+ SL+ + + E + ++ LM + + + Sbjct: 272 ILGGVGSLAGAVLGAFSFVLLAEWFSTLTKHW---------------QLLMGGFIIVAVA 316 Query: 334 MRSHSLLRL 342 + L+ L Sbjct: 317 LLPRGLVSL 325 >gi|256392503|ref|YP_003114067.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928] gi|256358729|gb|ACU72226.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928] Length = 329 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 119/323 (36%), Gaps = 26/323 (8%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 L FL + + Y S+ + L + A +SI+ G GL + + +GAY+ Sbjct: 22 AAVLAAFLLIAPSSFDGYGVSLLSKALALGVLAVSVSILAGYAGLPTSGQAAPFMVGAYA 81 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 ++G+ + + +++ GL +++ RG + TL + E+ +W Sbjct: 82 AGVMGTHGHTIGVVQLLCGTLVAAGFAAATGLVAVRTRGVAFLMTTLALGELTVTAAGEW 141 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T G G+Y + L + + +Y+ +L +++ W Sbjct: 142 RSLTGGTDGMYGIPPVKPLPGMAT------------LDSDRSVYWFVLVSTAAIVAVVWW 189 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + R+ + RD++ S + + A+ + A G G + +SPD Sbjct: 190 VLRSPVGKLLLACRDHEARMRSAGHPVTRYQWLAYVGAGALAGFGGVLMCSVNQYVSPDD 249 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F+ + +V+ V++GG TS +++ + G F Sbjct: 250 GSFANSALVLLAVVIGGATSPLGALLGAGLIVATRDWLAG--------------PFPGHG 295 Query: 321 TTLMVIALFLVILMRSHSLLRLR 343 L+ + + + + +R Sbjct: 296 PLLLGMMFIIAVYALPDGVAGIR 318 >gi|319792343|ref|YP_004153983.1| ABC transporter [Variovorax paradoxus EPS] gi|315594806|gb|ADU35872.1| ABC transporter related protein [Variovorax paradoxus EPS] Length = 595 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 115/323 (35%), Gaps = 22/323 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + +++ L L + + S+ I I + A GL ++ G G S I Sbjct: 8 MLWIAAVIVVLTLVPAVAGSFTVSLLNDIGIGALVALGLVLLTGVGGATSFGQAAFVGIA 67 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ L + G+S W+ + + +++G + +G+ +L+ G +L ++T+ + Sbjct: 68 AYATAWLTTTQGMSPWIGLLFALLLTGISALAIGMLTLRLGGHFLPLSTIAWGLSIAMLF 127 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + G+ L G + MYY++ + L+ Sbjct: 128 GNVDAL-GRHTGLSNIPALQVGGW--------------SLADPRSMYYLIWVVVGLACLF 172 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L ++ A R +R S+ +L+ F ++ F G+AG +A +S Sbjct: 173 SHNLLQSRPGRAIRGLRGGATLLASVGADAYRVRLTLFVTAALFAGLAGWLYAHMNRFVS 232 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F +I + + + GG+ L+ A+++ + + Sbjct: 233 PSPFDVRASIEYLLMAVAGGLGQLAGALVGAALVLVLKNGLQDVLPMLTQRA-------G 285 Query: 318 MRHTTLMVIALFLVILMRSHSLL 340 L++ L+ Sbjct: 286 QLEAVAFAALFILLLHFARGGLM 308 >gi|120601614|ref|YP_966014.1| inner-membrane translocator [Desulfovibrio vulgaris DP4] gi|120561843|gb|ABM27587.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Desulfovibrio vulgaris DP4] Length = 358 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 137/364 (37%), Gaps = 38/364 (10%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + L ++ LL+ +Y +++ + I I ++FA L+IV G +G S Sbjct: 2 RNYTLNIVLAALCLLVVGLSQFGVLDQYSETVLMFIGINIIFAASLNIVNGYMGEFSCGH 61 Query: 71 VIAYAIGAYSYVILGSRYGLS-----------------IWLLIPVSAMISGACGMIMGLP 113 +GAY +L + ++I + ++ G+++ LP Sbjct: 62 AGFMCVGAYVSSLLSVTLFTNNKVLGAALLPPELAPILFPVVIGIGGFVAAGFGLLVALP 121 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 S + RGDYLAI T+ + I +++ + I G G + ++ + + Sbjct: 122 SFRTRGDYLAIITIAANYIVISLIENLEFI-GGPRGFHGMKKVINGMRDLADIPWM---- 176 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 ++ S ++ L + + ++ A ++ KL+ Sbjct: 177 ----------LIWVILGTLFSLWLLRRLVTSTYGKGISAVCQDEVAAEIMSVDTNHIKLT 226 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF VSS G+AG +A ++P F ++ + +V LGGM SLS + + Sbjct: 227 AFMVSSGLAGVAGGLYAHIFGYVNPQAFNILKSTEGLVMVYLGGMASLSGSVMSAILFTL 286 Query: 294 VVELCCGMNFYYFNSLLKFDCSF------NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 ++E + + L + ++ + L L++ R ++ R S+ Sbjct: 287 LIESLRFVIPGLDSVLHSVGLLPDGYELSQIWKWVIIPLILILLMQFRPEGIMGNRELSD 346 Query: 348 FLER 351 + Sbjct: 347 VFPK 350 >gi|70729989|ref|YP_259728.1| branched-chain amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68344288|gb|AAY91894.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 349 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 128/318 (40%), Gaps = 16/318 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILG 85 F + + +++++ I L+ + GL+++ G G S+ A+GA+ +Y IL Sbjct: 31 FGVVPVLGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFMAVGAFATYGILL 90 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 L + L + +IS G + GLPS + +G YL ++TL + + +K+ N Sbjct: 91 RLPQLGLPLALLGGGLISALVGWLFGLPSSRIKGFYLMVSTLAAQFFLEWLFVKFPWFYN 150 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 + ++ L + + Y + L L + L R+ Sbjct: 151 YGSSGTISAPQLSLLGHDLNHPQG-------------RYLLTLVTVLLLTWVAQNLVRSQ 197 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFS 264 + W IRD A + + K AFAVSS ++G+AGA +A A S F + Sbjct: 198 VGRNWMAIRDMDTAAAVIGIPVARYKRQAFAVSSFYLGIAGALWAFAYLGTASASSFDIN 257 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + ++ I+I+GGM S++ A + + L + + Sbjct: 258 RSFQILFIIIIGGMGSVAGNFVGAAFISLLPILLSHAGQALLGGAVDAG-QLQNLQKIIF 316 Query: 325 VIALFLVILMRSHSLLRL 342 + + L ++ L+RL Sbjct: 317 GVLIILFLIKEPEGLIRL 334 >gi|17546759|ref|NP_520161.1| ABC transporter permease [Ralstonia solanacearum GMI1000] gi|17429058|emb|CAD15742.1| probable permease transporter transmembrane protein [Ralstonia solanacearum GMI1000] Length = 538 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 75/291 (25%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFRNHFPAAFDWYLPAALPAAFLAAAVVGFV 323 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 324 LER--MVLRHLYGRPLETLLATFGVSLLLMQAVRSVFGAQNVEVANPSWMSGGIALYPGL 381 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L RT + R N+ + AFA Sbjct: 382 ILPYNRLVILAFALVVVTLAWAVLNRTRLGLFVRATTQNRAMAACVGVRTWKVDSYAFAF 441 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ I V+LGG+ L+ L + + Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPDLGQGYIIDSFMAVVLGGVGQLAGTIVGAFGLGLINKC 499 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R L L+ S Sbjct: 500 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 537 >gi|148255134|ref|YP_001239719.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146407307|gb|ABQ35813.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 333 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 112/302 (37%), Gaps = 25/302 (8%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ + +LIY + G +++ G GLLS + GAY I R+GL + +P++ Sbjct: 45 ALAVNVLIYGVVVMGYNLLFGYTGLLSFGHAAFFGTGAYLTGIAIGRFGLPWFAAVPLAI 104 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 S A +G S + RG Y ++ TL ++++ + ++ T G+ G+ Sbjct: 105 AASTALAAAIGTISTRTRGIYFSMVTLALAQLVYYVALQASSWTGGENGLR--------- 155 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + + YYVL+ L+ + + IR+N++ Sbjct: 156 -GFTVDHVNLLGLQINFLDPVNKYYVLMAFAALAIWAQSRILNSPFGAVIEAIRENEQRA 214 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + KL F +S A + G A + D+ + + +++ +V+LGG S Sbjct: 215 RACGYDVERCKLIVFMLSGAISAIGGCMSALHLSIVPLDILHYQTSGMIVMMVLLGGARS 274 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+ + + ++ ++ ++ +L + Sbjct: 275 FFGPFIGAAVFLILEDVVSIWTPHW---------------QIVVGAIFVGFVLFLPKGIW 319 Query: 341 RL 342 Sbjct: 320 GT 321 >gi|320450029|ref|YP_004202125.1| branched-chain amino acid transport system permease LivM [Thermus scotoductus SA-01] gi|320150198|gb|ADW21576.1| branched-chain amino acid transport system permease protein LivM [Thermus scotoductus SA-01] Length = 355 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 124/307 (40%), Gaps = 21/307 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + + I + A GL ++VG G +SL +GAY+ YG +L Sbjct: 55 SPYPMYVATLVAIGALSALGLHLLVGGAGQISLGHAAFMGVGAYTA---SHLYGPLAFLG 111 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + I+ G+++GLPSL+ +G YLAIATL + + W+ +T G G + Sbjct: 112 ILLGGGIAALLGLVLGLPSLRIKGVYLAIATLAFQFLADYVFKNWEGVTGGIRGRTLPPA 171 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 F ++Y++L L T A+ +RD Sbjct: 172 ELFGLALDTPEK---------------LWYLVLFFTLPLFFYGKRLLMTRAGRAFMAVRD 216 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N + ++ KL AFA+S+ + G+AG A ++P+ F + +I +++VI+ Sbjct: 217 NDLSARVAGVDLVRVKLMAFALSAFYAGVAGGLLAQLYKAVTPEYFPLTVSIQYLAMVIV 276 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ ++ + E+ + ++ + + + +++ Sbjct: 277 GGAGTVLGAVLGAFFVLLIPEVLNSLVGALGP---QYAATLAAWRNVAFGLLILGFLILE 333 Query: 336 SHSLLRL 342 L+ L Sbjct: 334 PLGLVGL 340 >gi|147678684|ref|YP_001212899.1| branched-chain amino acid ABC-type transport system, permease components [Pelotomaculum thermopropionicum SI] gi|146274781|dbj|BAF60530.1| branched-chain amino acid ABC-type transport system, permease components [Pelotomaculum thermopropionicum SI] Length = 324 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 63/310 (20%), Positives = 119/310 (38%), Gaps = 20/310 (6%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + + + + A + + S G LSL C +IGAY+ IL YG+ ++ Sbjct: 3 LLNVYHLQIITFMAVNSILALSFYLPL-SAGQLSLGCAGFMSIGAYTAAILSLHYGMPVF 61 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 IP A + G+++G P+L+ G YLAIATL E+ + + + ITNG G+ Sbjct: 62 TTIPAGAAAAALAGVLLGFPALRLTGVYLAIATLGFGEVVRVLFLNL-KITNGALGMPEI 120 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY---YVLLGMCFLSASIILWLRRTAISNAW 210 L + + + + + + + +L + A Sbjct: 121 PNLNDYFSALYRSWGLQGGLAGLDLPRLAALTTVVFCYFVLAACVAFVLRQENSRTGRAM 180 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 ++ ++ A + + K+ AF + G+AGA A + I+P F + + ++ Sbjct: 181 AAVKADEVASGVMGIGATYIKMLAFVQGAFLAGLAGAISAHVTNFIAPGDFNYHRAVNIL 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 V+LGG + A+L + E M + + L Sbjct: 241 LFVVLGGSELVWGGLLGAAVLSVLPEFLRFMQDF---------------RWIIFGALLAA 285 Query: 331 VILMRSHSLL 340 +++ R L+ Sbjct: 286 MMVFRPQGLI 295 >gi|144899102|emb|CAM75966.1| inner-membrane translocator [Magnetospirillum gryphiswaldense MSR-1] Length = 319 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 118/309 (38%), Gaps = 30/309 (9%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + Y + + L + GL++++G G +SL +A+GAY I SR+G+ Sbjct: 27 GFANAYYYDVAVGALFNAIICVGLNLLIGYGGQISLGHGAFFALGAYGSAIATSRWGVPP 86 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + SA + G ++ P L+ +G YLA+ATL + I +L T G G+ V Sbjct: 87 LAAMVASATLVGLMAFVIARPILRLKGHYLAMATLGIGMIIYIVLKTEAQWTGGPDGMGV 146 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 Y++ + L+ + L L ++ + A R Sbjct: 147 DPLAVAGLALTTDRQW---------------YWLSAALLLLAVWLSLNLVQSPVGRALRA 191 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 + + K+ F VS+ F + G+ FA I+PD+ F +I ++++ Sbjct: 192 GHGAEIGAQVVGVDTSHYKVLMFVVSAVFASVVGSLFAHKNGFITPDIASFHRSIELVTM 251 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V+LGGM S+ IL + ++ + Y + + + Sbjct: 252 VVLGGMASIFGSVLGAFILTVLPQMLTAFDDY---------------EAMIFGAIMMGTM 296 Query: 333 LMRSHSLLR 341 + LL Sbjct: 297 IFLPKGLLP 305 >gi|73543049|ref|YP_297569.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72120462|gb|AAZ62725.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 342 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 125/298 (41%), Gaps = 15/298 (5%) Query: 46 ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105 +L + +FA ++++G GLLS + Y +G++ + + + A Sbjct: 49 VLCFALFACAFNLLIGYTGLLSFGHAAFFGGAGYISGEAMKVWGVTPEIGLILGTAGGAA 108 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 G ++G +++ +G Y ++ TL ++++ I ++ T G+ G+ R Sbjct: 109 IGYVVGSLAIRRQGIYFSMITLALAQMLFFICLQAP-FTGGEDGLQGIPR---------- 157 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 F + ++ +YYV L + + ++I+ + + I++N+ SL Sbjct: 158 ---GKLFGVLSLSDDLTLYYVALVIIVAAFALIVRTVHSPFGQILKAIKENEPRAISLGY 214 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + KL+AF +S+A G+AG+ A + +S + VI + ++GG+ +LS Sbjct: 215 DVDRFKLTAFVLSAALSGLAGSIKALVLGFETLTDVHWSMSGSVILMTLVGGLGTLSGPI 274 Query: 286 KATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +++ + + + + ++ S T ++ + +L ++ Sbjct: 275 VGAFVVVALENKLGDIGAFLASATGFQWFNSLGESVTMVIGAIFVICVLTFRRGIMGE 332 >gi|34763793|ref|ZP_00144707.1| Branched-chain amino acid transport system permease protein livM [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237742527|ref|ZP_04573008.1| branched chain amino acid ABC transporter [Fusobacterium sp. 4_1_13] gi|294784954|ref|ZP_06750242.1| branched-chain amino acid transport system permease protein LivM [Fusobacterium sp. 3_1_27] gi|27886431|gb|EAA23692.1| Branched-chain amino acid transport system permease protein livM [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430175|gb|EEO40387.1| branched chain amino acid ABC transporter [Fusobacterium sp. 4_1_13] gi|294486668|gb|EFG34030.1| branched-chain amino acid transport system permease protein LivM [Fusobacterium sp. 3_1_27] Length = 324 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 140/335 (41%), Gaps = 45/335 (13%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L ++ +LF + + +Y + I ILI V+ A L++ VG LG ++L +I Sbjct: 14 VLLIILYFILFSLINSGFISRYQVGILILILINVILAASLNVTVGCLGQITLGHAGFMSI 73 Query: 77 GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 GAY+ +L + + + +++G G I+G+P+L+ GDYLAI TL EI Sbjct: 74 GAYTAALLTKSGFLSGYPGYIVALIIGGVVAGFIGFIIGIPALRLTGDYLAIITLAFGEI 133 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +LI++ T G G+ R I + ++ + Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPR-------------------------INNFTLIYFITI 167 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S + + + A IR+++ A + + K AF +S+ F G+AG +A + Sbjct: 168 FSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + F ++ +I ++ +V+LGGM S + + +L + E+ Y Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R LL Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307 >gi|304392928|ref|ZP_07374859.1| urea ABC transporter, permease protein UrtC [Ahrensia sp. R2A130] gi|303294926|gb|EFL89295.1| urea ABC transporter, permease protein UrtC [Ahrensia sp. R2A130] Length = 388 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 102/356 (28%), Gaps = 33/356 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +A+ L F A Y ++ + L Y M A L++V G G+LSL + Sbjct: 23 LLAIAIAIANLGFPPDSALHVPDYAVALLGKFLCYAMLAVSLNLVWGYCGILSLGHSAFF 82 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+G Y+ + R + + LP + D A L+ + Sbjct: 83 ALGGYAMGMYLMRQIGTRGVYGNPVLPDFMVFLNYKELPWFWYGFDQFWFAALMAMFVPG 142 Query: 135 NILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + + + D + + F Sbjct: 143 LLAFVFGWLAFRSRVSGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFDIQ 202 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ L I + R+ RD + L KL + Sbjct: 203 TRETRAALFATSAIFLCLFLVITALVTRSRFGKLMIATRDAESRTRFLGYRPEKVKLFVW 262 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+ G+AGA + I+P F + +I V+ +GG ++ ++ G Sbjct: 263 TLSAVMAGIAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTIIGPVIGAFLVNGGK 322 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 G+ F ++ L L ++ +R Sbjct: 323 SWFTGL--------------FPEVWLFVLGALFVLTTLFLPKGVIGTLREGWIAKR 364 >gi|256783517|ref|ZP_05521948.1| branched amino acid transport system permease [Streptomyces lividans TK24] Length = 351 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 63/337 (18%), Positives = 131/337 (38%), Gaps = 25/337 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 AV LLL + T+ Y S+ + + + A GL +VG G +SL +A+G Sbjct: 19 AVFVVLLLTVPAVFTRVPFYTMSVAVLMCLQATAALGLVPLVGRAGQISLGQAAFFAVGG 78 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL R+ ++ L + A ++ A ++GL + +G YLA+ATL + ++ Sbjct: 79 YTSAILTGRWHVNALLALTAGAALAMAVAYVVGLFIFRAQGQYLALATLSFGLVVSSLAN 138 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + +T G+ L G + + + +YY++ G+ ++ + Sbjct: 139 QLP-LTGASNGLAGIPSLAPFGVELDTD--------------LSVYYLVAGVLLVAVLSV 183 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +A + D+ A + + + A A+++ +AG+ +A + Sbjct: 184 DALLRSPAGDALSALGDSPVATEAAGVSAAALRRGALALAAGLASVAGSLYAHWSSFMDS 243 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 ++ ++ I +GG+ + +++ E + F + Sbjct: 244 GQAGLLNSVQLLVIASVGGLRTPWGAPLGALVIVTFSEASKDLIPKV------FPSATGN 297 Query: 319 RHTTLMVIALFLVILMRSHSLLR----LRTPSNFLER 351 + IAL V+L + R S + Sbjct: 298 FDIIVYGIALIAVLLFLPRGVGGVTAVRRERSVRKRQ 334 >gi|126727103|ref|ZP_01742940.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2150] gi|126703531|gb|EBA02627.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2150] Length = 393 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 61/364 (16%), Positives = 129/364 (35%), Gaps = 31/364 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYID-------SMGIQILIYVMFAWGLSIVV 60 L+K + L L+ + + + + + + +I+ +FA G +I+ Sbjct: 4 LDKKNSALLLIVIALTVFAPFLMNPFPQSSGLAQFNAGYPDLMQRFVIFGIFAIGFNILF 63 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G LS +G+Y+ V + ++I I +S +++G +++G SL+ G Sbjct: 64 GLTGYLSFGHAAFLGVGSYAAVWMFKLLSMNIVPAIVLSVIVAGLFSLLIGFISLRRSGI 123 Query: 121 YLAIATLIMSEIFQNILIK-WKPITNGKAGIYVAD----------RLYFLGTTVRSLIRF 169 Y +I TL +++ + P+TNG+ G+ V + Sbjct: 124 YFSILTLAFAQMSFALAYSVLTPLTNGETGLQVYNDDPQILLGNGPTVTHLFGFEMNSTS 183 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + YYV M L+ + + + + R I+ NQ + Sbjct: 184 TLALGDWAFQFNMGYYVSAVMMVLAFYLSMRIFNSPFGLMLRAIKTNQTRLNYTGVSTRP 243 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 L+AF +S + G+AG A+ + +++ + V+ +VILGG +L Sbjct: 244 YTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMVILGGAGTLIGPILGAG 303 Query: 290 ILIGVVELCCGMNFYYFNSLLK-------------FDCSFNMRHTTLMVIALFLVILMRS 336 + + +N + + + L+++ Sbjct: 304 FIKYFENIFSKINENVLHGWFAALPDGLENAIVWVLHFFVGKGWHLTLGLLFMLIVIFLP 363 Query: 337 HSLL 340 L+ Sbjct: 364 GGLV 367 >gi|171741641|ref|ZP_02917448.1| hypothetical protein BIFDEN_00727 [Bifidobacterium dentium ATCC 27678] gi|283455042|ref|YP_003359606.1| branched-chain amino acid transporter permease [Bifidobacterium dentium Bd1] gi|306823907|ref|ZP_07457281.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|309802452|ref|ZP_07696559.1| branched-chain amino acid ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|171277255|gb|EDT44916.1| hypothetical protein BIFDEN_00727 [Bifidobacterium dentium ATCC 27678] gi|283101676|gb|ADB08782.1| branched-chain amino acid transport system permease protein [Bifidobacterium dentium Bd1] gi|304552905|gb|EFM40818.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|308221052|gb|EFO77357.1| branched-chain amino acid ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 327 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 123/313 (39%), Gaps = 8/313 (2%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + YV+ A GL+I G GL+++ +GAY + + G +++ + + Sbjct: 15 IAPTTAAYVLAAIGLNIHFGMTGLMNMGQAGFMLLGAYGFAV-TQSMGCNLFASVCAALA 73 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159 ++ +++G+P+LK DYLA+ TL +EI + I +T G AGI D Sbjct: 74 LAVIYALLLGIPTLKLGPDYLAMVTLAAAEIIRIIGRSTAMTNLTGGSAGISPQDFTEKF 133 Query: 160 ----GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 S S+ + ++ V + ++A + + + IR+ Sbjct: 134 EALSPLPDGSTTFLLWTYSNNIANSWWLRIVAWILVAIAAFLCWRWFHSPWGRMLKGIRE 193 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A SL + K+ + + F MAG F + PD + V +I++L Sbjct: 194 DENAIRSLGKPVTKYKMESLILGGLFGAMAGIIFVLP-RSVQPDSLGRTVTFYVWTILLL 252 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ + +L ++ + L ++ +AL +++ R Sbjct: 253 GGAATILGPVLGSCVLWVLLTFVKEVMRNTVPETLISSNQIEALGWVIVGVALMCLVIFR 312 Query: 336 SHSLLRLRTPSNF 348 LL R F Sbjct: 313 PQGLLGDRKELAF 325 >gi|251794594|ref|YP_003009325.1| urea ABC transporter permease UrtC [Paenibacillus sp. JDR-2] gi|247542220|gb|ACS99238.1| urea ABC transporter, permease protein UrtC [Paenibacillus sp. JDR-2] Length = 364 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 103/329 (31%), Gaps = 27/329 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------GSRY 88 + ++ + L + + A GL ++ G G+LSL I + +GAY+ + G Sbjct: 33 SDFRLNLLAKFLAFAIVALGLDLIWGYTGILSLGHGIFFGLGAYAMAMYLKLEASGGKLP 92 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI------FQNILIKWKP 142 W + + G + L ++ Sbjct: 93 DFMGWSGLSELPIFWKPFGSFGFAVLMGILIPAALALFLGYFTFRNRIRGVYFTILTQAL 152 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + + V + P + + +Y+V + + ++ Sbjct: 153 VIITTTLLVGQQAYTGGTNGVTGFGKILGEPIASPDTKRMLYWVTAAVLVAVFILCRYVV 212 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ R IRD + + ++ F +S+A G+AG F ISP M Sbjct: 213 KSRFGKVLRAIRDGENRVRFIGYNPAVYQMVVFTMSAAIAGIAGMLFVLHVGIISPSMMG 272 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 +I ++ V +GG +L A ++ +F ++ T Sbjct: 273 IVPSIEMVLWVAIGGRGTLIGAALGAVLMNWAKS--------------EFSTTYPQGWTY 318 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351 + LV++ + + L F ++ Sbjct: 319 FLGGVFILVVVFLPNGVAGLAAKLKFRKK 347 >gi|149909706|ref|ZP_01898358.1| putative ureashort-chain amide or branched-chain amino acid uptakeABC transporter permease protein, possibly fusion [Moritella sp. PE36] gi|149807220|gb|EDM67175.1| putative ureashort-chain amide or branched-chain amino acid uptakeABC transporter permease protein, possibly fusion [Moritella sp. PE36] Length = 405 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 99/306 (32%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + + GL+I G +G++++ +GAY+ ++ +I L + +S Sbjct: 120 LSLGSVLALAGLGLAITFGVMGVINMAHGELIMLGAYTTYVMQQLMPDNIGLSLVLSIPA 179 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G+ + +L L + +L + + + + Sbjct: 180 AFLVSGLVGIAIERGVIRFLYGRPL------ETLLATFGISLILQQAVRSVFSPLNRSVS 233 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + Y+++ + ++I L++T + R + N+ + Sbjct: 234 TPDWMSGMLEFNPMLALTYNRLYIIIFCLLVFCTLIFVLKKTPLGLQVRAVSQNRSMARA 293 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + + G+AG + + S I +V+ GG+ +L Sbjct: 294 MGVRSEWVDAMTFGLGAGVAGIAGVALSQLTNV--GPNMGQSYIIDSFMVVVFGGVGNLW 351 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L +L ++++ + L I R L Sbjct: 352 GTLVAGLTLGLFNKLLEPWAGAVLAK-------------IIVLVFIILFIQKRPRGLFPQ 398 Query: 343 RTPSNF 348 R + Sbjct: 399 RGRAAE 404 >gi|148926074|ref|ZP_01809760.1| putative branched-chain amino-acid ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845553|gb|EDK22645.1| putative branched-chain amino-acid ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 350 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83 Y ++ QI I+++ A +++ G G SL AIGAY+ + Sbjct: 24 PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 83 Query: 84 ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + + S L + V+ + S +I+ + RGDYLAI TL Sbjct: 84 NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + I + ITNG G+ + Y G+ Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ +IL + + A + IRD++ A ++ + K AF+ S+ G+ G A Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309 +SP F F ++ I++LGG+ S + ++IG E ++ SL Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 S + I L LV+L ++ S+ + Sbjct: 299 NLDIQSMPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339 >gi|312961233|ref|ZP_07775738.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311284891|gb|EFQ63467.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 355 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 132/337 (39%), Gaps = 16/337 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + F+ + + + ++ + +L+ + GL+++ G G LSL A+ Sbjct: 27 IGLWLLLGFAFVAMPWLGNDYWFSAILVPLLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ + GL + L + +I+ + GLPSL+ +G YL +ATL + + Sbjct: 87 GAFAAYNLQLRVPGLPLLLSFALGGVIAALVAVFFGLPSLRIKGFYLLVATLAAQFVVEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L ++ TN A + Y + L + Sbjct: 147 VLTRFSWFTNDNASGVITSPPL-------------LIAGLDFSSPRGRYVLTLAVVVALF 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254 + L R+ + W +RD A + ++ AKL AFA+S ++G+AG+ +A Sbjct: 194 WLGKNLVRSELGRNWMAVRDMDTAAAVIGIRLLKAKLLAFAISGFYLGVAGSLWAFTYLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F S + V+ I+I+GG+ S+ A ++ L + L+ Sbjct: 254 TVEPHGFDLSRSFQVLFIIIIGGLGSVLGNVLGAAFIVLFPILLGNLFALLPAGLMDAGQ 313 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 N++ L + ++ L RL R Sbjct: 314 LENIQKM-LFGALIITFLIKEPEGLARLWQRFRQRAR 349 >gi|261855702|ref|YP_003262985.1| urea ABC transporter permease [Halothiobacillus neapolitanus c2] gi|261836171|gb|ACX95938.1| urea ABC transporter, permease protein UrtB [Halothiobacillus neapolitanus c2] Length = 561 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 92/297 (30%), Gaps = 21/297 (7%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY+ +L + + ++ + I+G Sbjct: 285 AAIGLAITFGVMGVINMAHGEMMMIGAYTTWLLQQLMPNHLTAALFLAIPSAFLAAGIIG 344 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + +L L + +L + + + + + Sbjct: 345 MAIERGLIRFLYGRPL------ETLLATFGLSLMLQQAARIIFTPLNRAVALPDFMSNSW 398 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + Y+L+ + +++L L+R+ R + N+ + + Sbjct: 399 VVNPVFAITYNRLYILIFSLTVFFALLLLLKRSTFGLRIRAVAQNRAMARACGVRSNWID 458 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A + S + +V+LGG+ +L A + Sbjct: 459 ALTFGLGSGIAGIAGVALAQITNV--GPNLGQSYIVDSFMVVVLGGVGNLWGTLVAGMGI 516 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + + ++ + R L + + Sbjct: 517 GVLNKFLEPYSGAVLAKVVVLVLVILVIQK-------------RPRGLFPQKGRAAE 560 >gi|258645959|ref|ZP_05733428.1| amino acid ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260403328|gb|EEW96875.1| amino acid ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 320 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 57/309 (18%), Positives = 117/309 (37%), Gaps = 17/309 (5%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + + I ++ A + + + G+LSL + GAY+ IL ++Y + + Sbjct: 4 LLNGYFLQVLTFVCINIILAMTIYMTL-CTGILSLGNAGLMSFGAYTSAILTAQYHVPMP 62 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + I + +++ +++GLP+++ RG YLAIATL E+ + I + + + Sbjct: 63 VGIFLGGVMAVLVALVIGLPTIRLRGLYLAIATLGFGEVVRVIALNLEITHGALGYSGIP 122 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS-IILWLRRTAISNAWRT 212 L + ++L + + L + I A Sbjct: 123 SMGSVLSDYASDWGLLDALEIDSQTGGQLLVCLVLLVLTVLIISFWYRLEHSRIGRAMAA 182 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 ++ ++ A +++ K+ F S+ F G+AGA +A ISP F + + ++ Sbjct: 183 VKADEYAASLSGINVVYYKMMGFLFSAFFAGVAGALYAHVTFFISPTDFSWHRVVDMLLY 242 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 + GG + A+L V E + Y + + L ++ Sbjct: 243 TVFGGSNVMWGPVLGAAVLTIVPESLRSLAEY---------------RDIIYGVMLVALM 287 Query: 333 LMRSHSLLR 341 R +L Sbjct: 288 AFRPDGILS 296 >gi|218282090|ref|ZP_03488389.1| hypothetical protein EUBIFOR_00964 [Eubacterium biforme DSM 3989] gi|218216883|gb|EEC90421.1| hypothetical protein EUBIFOR_00964 [Eubacterium biforme DSM 3989] Length = 318 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 144/341 (42%), Gaps = 43/341 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 LNK + LL+VV ++L + + Y I I ++ A L++V+G G S Sbjct: 6 LNKANFAWLLLSVVSFVVLTILMKVGIIGSYYSITLYNIFINIILAVSLNLVIGVCGQFS 65 Query: 68 LNCVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L IGAY I+ + + + + ++S +I+ +P+L+ +GDYLAIA Sbjct: 66 LGHAGFMCIGAYCAGIMVKMMPNMTGLVIGVLIGFVLSTIVALIVSIPTLRLKGDYLAIA 125 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL +EI + ++ + ITNG AG+ +L Sbjct: 126 TLGFAEIVRILVQNME-ITNGAAGLNGIPKLTTFP------------------------- 159 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +L +S ++ +A A +IR+++ A ++ K+ AF + + +A Sbjct: 160 LLFVCAVISILVVCNFTHSAPGRACLSIREDEIASEAMGINTTKYKVIAFVIGALLASLA 219 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA FA + I PD F F+++I ++ +V+ GGM S++ A + + + + Sbjct: 220 GALFACNFYVIKPDQFTFNKSIDILVMVVFGGMGSMTSSVLAAVAIGIINVVLANFSE-- 277 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + +AL +++ + +L + S Sbjct: 278 -------------IRMIIYGLALVGIMIFKPTGILGTKELS 305 >gi|296269442|ref|YP_003652074.1| inner-membrane translocator [Thermobispora bispora DSM 43833] gi|296092229|gb|ADG88181.1| inner-membrane translocator [Thermobispora bispora DSM 43833] Length = 358 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 123/317 (38%), Gaps = 4/317 (1%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + L + + G+ + + A GL+++ G+ G LSL + A G Sbjct: 16 LIAWLAAVAVLVAVPFYLEAFWLQTGLFAMSAAIGAIGLNLLTGATGQLSLGHALFLAAG 75 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYSY++ GL + + +++G G + + + +G YL IATL + + Q++L Sbjct: 76 AYSYIVFAEDAGLPTPVAAACAVVLAGVIGGLFSPIAGRLKGAYLGIATLALIFVGQHVL 135 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 P+T G G V F ++Y+ L + +A+ Sbjct: 136 HNAGPVTGGSNGRRVPPMELFGLVFDDRPELV--LLDVPFGALERLWYLGLVLLAGAAAF 193 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + A IRD++ A + + + + F +SS + G+AG A ++ Sbjct: 194 ARGVLAGRPGIAMNAIRDHETAAGVMGVPVTRYRAAVFVLSSMYGGLAGVLLALVFRQVV 253 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCS 315 PD F ++ ++++++GG+ S++ + + +L S Sbjct: 254 PDNFGMLLSLDYLAMIVIGGLGSVAGSVLGAVFVSLLPQLLMRYGDVLPLVAEPGTGGFS 313 Query: 316 FNMRHTTLMVIALFLVI 332 L A+ V+ Sbjct: 314 PAEAARILYGAAVVAVV 330 >gi|57237903|ref|YP_179151.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni RM1221] gi|57166707|gb|AAW35486.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni RM1221] Length = 350 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 127/341 (37%), Gaps = 47/341 (13%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83 Y ++ QI I+++ A +++ G G SL AIGAY + Sbjct: 24 PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYVAALVLLSADAK 83 Query: 84 ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + + S L + ++ + S +I+ + RGDYLAI TL Sbjct: 84 NDQFFLDGPSSFILAIHSNSFILALIMAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + I + ITNG G+ + Y G+ Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ +IL + + A + IRD++ A ++ + K AF+ S+ G+ G A Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309 +SP F F ++ I++LGG+ S + ++IG E ++ SL Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + S + I L LV+L ++ S+ + Sbjct: 299 NLYIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339 >gi|72383796|ref|YP_293150.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72123139|gb|AAZ65293.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 343 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 131/322 (40%), Gaps = 15/322 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + + + + + ++++ + +FA ++++G GLLS + Y Sbjct: 5 LFIAAVIGIALVLPTFFYPVLLMKVMCFALFACAFNLLMGFTGLLSFGHAALFGSAGYVT 64 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + G+ + I + ++ S G++M +++ +G Y + TL ++++ + ++ Sbjct: 65 GYVARDLGIPVEGAILLGSLTSAFLGLLMASLAIRRKGIYFTMITLALAQMIYFLCLQ-T 123 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 P+T G+ G+ R + ++ MYY +LG+ + ++I + Sbjct: 124 PVTGGEDGMQGIPR-------------GRLLGIFDLANDMTMYYFVLGVFVAALALIARI 170 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + R +++N+ SL K+ AF +SSA G+AG+ A + Sbjct: 171 VHSPFGQILRAVKENEARAISLGYDADRYKIVAFVLSSALTGLAGSVKALVLGFETLVDV 230 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRH 320 + + +V+ + ++GG+ +LS +++ + + +++ + Sbjct: 231 HWGMSGMVVLMTLVGGVGTLSGPVVGAVVIMVLENKLGEIGEVLAKVTHIEWFQALGESV 290 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T + + + +L+ + Sbjct: 291 TIITGLTFIVCVLLFRKGITGE 312 >gi|148273747|ref|YP_001223308.1| putative branched-chain amino acid ABC transporter permease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831677|emb|CAN02646.1| putative branched-chain amino acid ABC transporter, permease component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 323 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 124/307 (40%), Gaps = 4/307 (1%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 Y + GL I G GLL+ AIG Y++ I Y +W + + + S Sbjct: 17 TTAAYALATVGLVIHFGFTGLLNFGQAGFMAIGGYAFAITAVMYDWPVWASLLAAIVAST 76 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT-NGKAGIYVADRLYFLGTTV 163 +I+G+P+L+ R DYL+I T+ +EI + + + G + F Sbjct: 77 VFALILGIPTLRLRADYLSIVTIAAAEIIRLSVKTPEFSDVTGGSEGINGAAAGFNELNP 136 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 RF ++ + ++ V G+ ++ ++ L R+ + +R+++ A +L Sbjct: 137 LPEGRFGAGVLTYSADQWWIRIVGWGLVGIACLLVFLLMRSPWGRVLKGVREDEDAVRAL 196 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + K+ A + F G+AG F + PD + + +I++LGG ++ Sbjct: 197 GKNVYSYKMQALVLGGVFGGLAGVVFILP-RSLQPDNYGTQLTFFLYTIMLLGGAATIFG 255 Query: 284 IAKATAILIGVVELCCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + I + L G+ + L ++ +AL L+++ R + Sbjct: 256 PVIGSIIFWVTLSLSDGLLSLAVSNDWLPISSTQQGPIRFIIVGVALMLLVIFRPQGIFG 315 Query: 342 LRTPSNF 348 + ++F Sbjct: 316 KKKETHF 322 >gi|145594349|ref|YP_001158646.1| inner-membrane translocator [Salinispora tropica CNB-440] gi|145303686|gb|ABP54268.1| inner-membrane translocator [Salinispora tropica CNB-440] Length = 337 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 122/329 (37%), Gaps = 29/329 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L+ L + ++ + IL + +FA + +++G GLLS + + AY Sbjct: 33 ALLVAGLAVALWLPNGLYPAVAVDILCWALFAVAVDLLLGFTGLLSFGHAAFWGVSAYVT 92 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 ++ GL + A+ + + +G +++ G Y A+ TL +++ + +W+ Sbjct: 93 GLVAIHLGLPFPAAVLAGALAAAVLAVPVGYLAVRRTGIYFAMVTLAFAQLVYYVANEWR 152 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G+ G+ R + + + YY +L + L + + Sbjct: 153 SVTQGENGLQGVPRE---------------LFGLDLTDDYYFYYAILPIVLLGLAGAWRI 197 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + IRDN +L + KL+ F +S G+ G FA S +S ++ Sbjct: 198 VHSPFGRVLVGIRDNPARARALGYPVHRYKLTVFVLSGFVAGLGGGLFAVSHRFVSLEVL 257 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 ++ + + +V+LGG+ +L I++ + + F Sbjct: 258 HWTTSGKAVIVVVLGGIGTLWGGVLGAGIVVRLEDWLSFSGFEAIG-------------- 303 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + +V+L+ + + Sbjct: 304 LVTGGIFVVVVLLFRRGIWGTASALARRR 332 >gi|326384258|ref|ZP_08205940.1| ABC transporter-like protein [Gordonia neofelifaecis NRRL B-59395] gi|326197123|gb|EGD54315.1| ABC transporter-like protein [Gordonia neofelifaecis NRRL B-59395] Length = 914 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 127/336 (37%), Gaps = 21/336 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + +I+ + + + L + + I +I+ M A +V G G + Sbjct: 318 RSPRPRRIVVPTLICVAVAVVALL---ITSGSLRLAVISSMIFGMIALSQLVVTGYAGQV 374 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 SL + GA++ GS G+ ++A+++ G+++GLP+L+ RG L +AT Sbjct: 375 SLAQLTLAGTGAFALSRFGSNMGIPFPFAPLLAALVAMVIGVVVGLPALRVRGLPLMVAT 434 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++ + + + G G + F + I + Sbjct: 435 LALAVFAEAFWFRNPSLNGGIDGAPIKPPSIFGID--------LGIGAGDGYPRIAFGIL 486 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 L + ++A + LRR+ + + +R N+++ S + KL AFA++S G+ G Sbjct: 487 CLVVLTITALAVAALRRSRLGASMLAVRANERSAASAGIDVGATKLLAFAIASFIAGLGG 546 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + A + + + I + +++ + G+TS++ A + Sbjct: 547 SLLAYQQTLAAAGTYAVFSGIALFAVIYIAGVTSITGSLLAGIM----------APGALM 596 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ F + L L ++ + Sbjct: 597 YFIMDRYLHFGDYYMLASGALLILTVVTSPDGIAGR 632 Score = 53.7 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 31/297 (10%), Positives = 78/297 (26%), Gaps = 7/297 (2%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ +Y L + S G+++ AY++ L L + Sbjct: 6 AYLLLGMGNGAVYAALGLALVMTYKSSGVVNFATGAVALYAAYTFAFLRHGQLLIPIPGL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G ++ L + + ++ + V L Sbjct: 66 DSTVDVGGPWAVMPALIVSVLLASIVGVIAELVVFRPMRTAPVLAKAVAAIGVMLVLQAL 125 Query: 157 YFLGTTVRSLIRFFRF-----PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 L + F + ++ + L+ L L+ T A Sbjct: 126 IALQVGPNTPTVAPIFKQKNLHIGDAVVPTDRLWLAAVIVCLAVCAGLVLKYTRFGIATE 185 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +++K + L+ +A+SSA + G A + + ++ Sbjct: 186 ASAESEKGALLTGLSPDRISLANWALSSATAAIGGIVIAPIVPL--NPIAYTMFIVPALA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 ++G + A ++ + + + L + + Sbjct: 244 AALVGDFAGIGITVAAGLVIGMLQSETTYLQSIWDAMPDAGMAEAVPLVLILAFLLI 300 >gi|126652406|ref|ZP_01724579.1| branched chain amino acid ABC transporter, permease [Bacillus sp. B14905] gi|126590827|gb|EAZ84941.1| branched chain amino acid ABC transporter, permease [Bacillus sp. B14905] Length = 338 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 121/337 (35%), Gaps = 31/337 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A +F L + + + QI I+ + A I++G G++S + + IG Sbjct: 10 IAFFLLFGIFFILPFVNDSRTLLILLTQIFIFGILAMSYDILLGYTGIVSFGHAMFFGIG 69 Query: 78 AYSYVIL---GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY+ ++ + L I + +++G ++GL +L+ + + A+ TL S +F Sbjct: 70 AYTTAVMLKQMENTMVIFVLSIVIGMLLAGLISFLVGLLTLRLKSHFFAMLTLAFSGLFL 129 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + KW+ +T G G F Y+ +LG L Sbjct: 130 VLAEKWRTVTYGNDGFTFRAPDMFRDRM-------------------TFYFFVLGSLVLI 170 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + +R+N++ SL + K+ A V+ AG+ +A S Sbjct: 171 FLALYRFVNSPTGRILIAVRENEQRTKSLGFNTLHYKVIASVVAGIVASFAGSLYAVSLR 230 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++ + + + + I+GG+ +L +A++ G+ D Sbjct: 231 FVNTSVMTMDITLDALLMTIIGGVGTLVGPLLGSAVIEYAQHTLSGLAR---------DY 281 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R I L ++ L+ + R Sbjct: 282 PIFERWIIFFGILYILAVIFFPKGLIGTLRLLIWKWR 318 >gi|225389093|ref|ZP_03758817.1| hypothetical protein CLOSTASPAR_02839 [Clostridium asparagiforme DSM 15981] gi|225044845|gb|EEG55091.1| hypothetical protein CLOSTASPAR_02839 [Clostridium asparagiforme DSM 15981] Length = 335 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 74/325 (22%), Positives = 142/325 (43%), Gaps = 25/325 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + + + + + +YV+ A L++ VG LG LSL +GA Sbjct: 1 MIACWVVVQIMMATGHMTSLMKGLLVPLCMYVILAVSLNLTVGILGELSLGHAGFMCVGA 60 Query: 79 YSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +S + L + + A+++ G+++G+P L+ RGDYLAI TL E Sbjct: 61 FSGAFFTKLTAEAIPNLQVRFILALIIGALVAALFGILIGIPVLRLRGDYLAIVTLAFGE 120 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I +I + GI++A + L + + + + + + Sbjct: 121 II-KNVINVLYVGADANGIHIAMKKADLNLQEGGQVIIEGAKGITGTPKAATFAIGIVLV 179 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ I+L L + A IRDN+ A S+ I KL AF++S++ G+AG +A Sbjct: 180 LLTLFIVLNLMNSRSGRAIMAIRDNRIAAESVGINITKYKLMAFSISASLAGVAGVLYAH 239 Query: 252 SRDR--ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + +P F ++ +I+++ V+LGG+ ++ A IL + EL G+N Y Sbjct: 240 NLSSLAATPKSFGYNMSIMILVYVVLGGIGNIRGSIIAAVILTLLPELLRGLNNY----- 294 Query: 310 LKFDCSFNMRHTTLMVIALFLVILM 334 + + L +++L Sbjct: 295 ----------RMLIYAVVLIVMMLF 309 >gi|15643894|ref|NP_228943.1| branched chain amino acid ABC transporter, permease protein [Thermotoga maritima MSB8] gi|4981684|gb|AAD36213.1|AE001771_6 branched chain amino acid ABC transporter, permease protein [Thermotoga maritima MSB8] Length = 359 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 64/367 (17%), Positives = 132/367 (35%), Gaps = 47/367 (12%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M +L+ + + + + L L+L Y + I IY + A L+++ Sbjct: 1 MMKMEKKLSARTNFILTVVFLIFMALLLYLADRYMDSYKLRVVRLIAIYGIMAVSLNLIN 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAM 101 G G+ SL IGAY+ + + + + Sbjct: 61 GITGIFSLGHAGFILIGAYTASLLTLSPEQKAMSFIIEPIVPWLANAHTDFFTATVAGGV 120 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 ++ ++G P L+ GDYLAIA+L +E+ + I + ITNG G+ Sbjct: 121 LAAVFAFLIGWPVLRLSGDYLAIASLGFAEVIRIIALNAISITNGPLGLKGIP------- 173 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 E + G F++ + L ++ A + IR+++ A Sbjct: 174 ------------------EYSNIWWCYGWLFVTVLFMASLVNSSYGRALKAIREDRIAAE 215 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMT 279 ++ + +L +F + + F G++G+ +A I P V+ +++LGG+ Sbjct: 216 AMGINVFKHQLLSFVIGAFFAGVSGSLYAHWLTTIDPRTTTLGPMLTFYVLIMIVLGGLG 275 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+S A+ + E + + + M ++ LV++ + Sbjct: 276 SISGSLIGAALFAILFEWLRDLEEPFTFFGIHVPGIKGM-RILVISAIFILVMIFWQRGI 334 Query: 340 LRLRTPS 346 + + Sbjct: 335 MGREELT 341 >gi|300313996|ref|YP_003778088.1| urea ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076781|gb|ADJ66180.1| ABC-type urea transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 538 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 86/291 (29%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ + + I +++ I+ Sbjct: 265 ITFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPGAIDAYLVVALPAAFIVAAAVGIA 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ + S + + Sbjct: 325 LER--LVIRWLYGRPLETLLCTWGISLMLMQGVRSIFGAQNVEVANPSWMSGGVTVLGSL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ ++ L L +T + R + N++ + + + F + Sbjct: 383 VLSYNRIVIVFFALFVVFAVWLILNKTRLGLFVRAVTQNRRMADCVGVSTGKIDMMTFGL 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 G+ G + + + +V+LGG+ L+ A L V + Sbjct: 443 GCGIAGLGGVALSQLGNV--GPDLGQGYIVDSFMVVVLGGVGQLAGTVIAAFGLGEVNKF 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 M +++ + + I R L L+ S Sbjct: 501 LEPMAGAVLAK-------------IAILVFIIVFIQKRPQGLFALKGRSVE 538 >gi|121603463|ref|YP_980792.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120592432|gb|ABM35871.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 355 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 121/326 (37%), Gaps = 16/326 (4%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + + + + ++ I L+ + GL+++ G G LSL A+GA++ G R Sbjct: 38 VIVPFVGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGAFAAYNFGLR 97 Query: 88 YGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 L + + + + ++ GLPSL+ +G YL ++TL L K+ +N Sbjct: 98 LPGLPLLACLFLGGVTAALVAVVFGLPSLRIKGFYLIVSTLAAQFFVSWALTKFGWFSND 157 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 A ++ + Y + L + + L R+ + Sbjct: 158 NASGVISAPPLT-------------IFGVDFSAPVGRYLLTLSVVAALFWLGKNLVRSEL 204 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSE 265 W +RD A + ++ KL AFA+S F+G+AG+ +A + P F + Sbjct: 205 GRNWMAVRDMDTAAAVIGIPLLKTKLLAFALSGFFLGIAGSLWAFTYLGTVEPHGFDLNR 264 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + V+ I+IL G+ S+ A ++ L + L+ + Sbjct: 265 SFQVLFIIILSGLGSILGNFLGAAFMVLFPLLLSNLAGALPVGLIDPG-QLENLQKFIFG 323 Query: 326 IALFLVILMRSHSLLRLRTPSNFLER 351 + ++ L RL R Sbjct: 324 ALIIAFLIKEPEGLARLWQRFRERVR 349 >gi|160937754|ref|ZP_02085114.1| hypothetical protein CLOBOL_02647 [Clostridium bolteae ATCC BAA-613] gi|158439399|gb|EDP17151.1| hypothetical protein CLOBOL_02647 [Clostridium bolteae ATCC BAA-613] Length = 337 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 126/326 (38%), Gaps = 25/326 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + +L + +++ ++ IL++ + G +++ G G +S + Y I Sbjct: 12 FIGLGIGVLAAVIFPQVVRIRFVWNLLSLILVWAIVGMGWNVIGGYCGQVSNGHSLFYGI 71 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ + S + +S W+ I + IS I+G P L+ +G AI+T+ ++E + I Sbjct: 72 GAYTVGLAVSYFKISPWISIWIGVGISMLIAFIVGKPLLRLKGHVFAISTMALAECTRII 131 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 I WK + + + YYV L Sbjct: 132 FINWKWCGGATGVYIYSKGVNEWAFMQFKN-------------PLNYYYVFLIFTVAVLV 178 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 +I L ++ RTI+ N+ A S+ K+ A+ +S+A + + G+ +A I Sbjct: 179 LIKCLDKSKFFYYLRTIKGNEMAAESVGINAASYKIRAYMLSAAIVSIGGSLYAQFILYI 238 Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P M + +++++ ++GG+ ++ +L + E Sbjct: 239 DPSMLMTLNVSMMIVLTAVMGGVGTVLGPVLGAIVLTSISEYSRVYLG-----------Q 287 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + L + L++L +L Sbjct: 288 YGGLDMILYGTLVILIVLFIPGGILS 313 >gi|90420354|ref|ZP_01228262.1| urea short-chain amide or branched-chain amino acid uptake, UrtA, ABC transporter permease [Aurantimonas manganoxydans SI85-9A1] gi|90335688|gb|EAS49438.1| urea short-chain amide or branched-chain amino acid uptake, UrtA, ABC transporter permease [Aurantimonas manganoxydans SI85-9A1] Length = 524 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 91/294 (30%), Gaps = 18/294 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S L P S I+ ++ Sbjct: 245 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEAIRGSAPWLFPWSLTIALPLAFLVS 304 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + L + + +L + + + Sbjct: 305 GFAGLVMERGL--IRFLYGRPLETLLATFGVSLILQQAVRTVFGPTNREVGNPDW-MSGA 361 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + +++ L RT + R + N+K ++ + Sbjct: 362 FDVGLMSVTWNRLWIIVFALVVFLALLAVLNRTPLGLQMRAVTQNRKMASAMGIRTPWVD 421 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FA+ S G+AG A S+ I +V+ GG+ +L L Sbjct: 422 AMTFALGSGIAGVAGV--ALSQIDNVSPSLGQGYIIDSFMVVVFGGVGNLWGTLVGAMSL 479 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + ++++ + L I R L + Sbjct: 480 GVLNKFLEPYAGAVLGK-------------IIVLVLIILFIQKRPRGLFAQKGR 520 >gi|269954918|ref|YP_003324707.1| inner-membrane translocator [Xylanimonas cellulosilytica DSM 15894] gi|269303599|gb|ACZ29149.1| inner-membrane translocator [Xylanimonas cellulosilytica DSM 15894] Length = 493 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 102/306 (33%), Gaps = 30/306 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 L+ + + GL++V G+ GL + +GA + + +GL +WL IPV+ +I Sbjct: 213 LRFGLLLALASIGLNLVFGTTGLSNFAHGEQVTLGAMFGYLSINVWGLPVWLAIPVTLVI 272 Query: 103 SGACGMIMGLPSLK---FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +GA G + + RG + A ++ + + + + G++ ++ Sbjct: 273 AGATGWVQDTALWQPLRRRGTPVMQAMIVTIGLSIALQFTIQMVIGGRSLRVLSGNPTP- 331 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + + I LWL RT I A R + DN Sbjct: 332 ------------LRIAGITLSQASWVSMAVATVCIVVIALWLTRTRIGQATRAVSDNPAL 379 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + +S+ ++G A S + +++ + V LGG+ Sbjct: 380 AAATGIDPNRIIRVVWIMSTTLAALSGILVAVSFGAFNW-SLGMQLLLLMFAAVTLGGLG 438 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + + ++ VVEL + + R + Sbjct: 439 TAFGALVGSILIGLVVELSNLVLPSDLRYASALVILILVLLV-------------RPQGI 485 Query: 340 LRLRTP 345 L R Sbjct: 486 LGRRER 491 >gi|114563008|ref|YP_750521.1| inner-membrane translocator [Shewanella frigidimarina NCIMB 400] gi|114334301|gb|ABI71683.1| inner-membrane translocator [Shewanella frigidimarina NCIMB 400] Length = 357 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 130/325 (40%), Gaps = 19/325 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + L L Y ++ IQI + A GL+I+VG G +SL + GA+ Sbjct: 31 IAVITIALLCLAPFVVDAYYLTLFIQISYLGIAALGLNILVGYTGQISLGHGAFFGFGAF 90 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L + +G+ + L IP++ ++ GMI GLP+ + +G YLAIATL I ++ + Sbjct: 91 ASAWLNTSFGIPVLLCIPLAGFLTMGVGMIFGLPASRIKGLYLAIATLAAQFILEDFFAR 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + G +G F +YV L Sbjct: 151 ADWFSGGSSGSSADPISLFGFVFDTDE---------------SFFYVALFALVFMYIWGC 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ A+ +RD+ + + + +L +F VSS + G+ GA +A +S + Sbjct: 196 NLMRSREGRAFIAVRDHYLSAEIMGIKLNKYRLLSFGVSSFYAGIGGALYAHYLGYVSAE 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG----MNFYYFNSLLKFDCS 315 F +I ++++I+GG+ S+ ++ + E+ M + ++ Sbjct: 256 GFTLFMSIQFLAMIIIGGLGSIKGTLMGVVFMVFLPEVLESGVGLMKMTDWGNIPAVVDG 315 Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340 + + + L ++ + Sbjct: 316 LAYIKEMAIGLVIILFLIFEPEGMA 340 >gi|84514630|ref|ZP_01001994.1| branched-chain amino acid ABC transporter, permease protein [Loktanella vestfoldensis SKA53] gi|84511681|gb|EAQ08134.1| branched-chain amino acid ABC transporter, permease protein [Loktanella vestfoldensis SKA53] Length = 358 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 79/344 (22%), Positives = 136/344 (39%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F + +++ L ++ F + + + +++ + LIY + A GL+I+ G Sbjct: 20 FPIAFDRWRYWAVL------VIAFCVVPFFVNAYWANAILVPFLIYAIAAIGLNILTGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ S +SI + I ++ I+ A G GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTSFPDVSIVIHIILAGGITAAVGAAFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + K N + Sbjct: 134 AVATLAAQFFLVWMFNKVSWFYNYS---------ASGQINAPERFVAGIAVTGPNTAPWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y + L + A I L R I +W IRD A + + AKL+AFAVSS FI Sbjct: 185 QYMICLVFLTICALIARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFI 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA F A + F ++ +V+ ++I+GG+ SL A L+ + Sbjct: 245 GISGALFFAVYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSLFGSFAGAAFLVLLPVALKV 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + ++ + ++ H L +L Sbjct: 305 IGVDLLGWPTDL---VAHLQLVIVGGLIMFFLIKEPHGLAQLWR 345 >gi|186684723|ref|YP_001867919.1| urea ABC transporter inner membrane protein UrtC [Nostoc punctiforme PCC 73102] gi|186467175|gb|ACC82976.1| urea ABC transporter, inner-membrane subunit UrtC [Nostoc punctiforme PCC 73102] Length = 385 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 100/349 (28%), Gaps = 27/349 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R ++ + VV L + + ++ ++ + L + A G+ ++ G GL Sbjct: 14 MRKKGGGLLIEVGVVVAIALFLIIVMPLVLSEFRLNLLGRFLSLAIVALGIDLIWGYTGL 73 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LSL I + +G Y+ + + L + L + Sbjct: 74 LSLGHGIFFGLGGYAIAMYLKLQVPTGELPDFMGLYGVTELPAFWKPFYSFPLTIALVVI 133 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF-------------FRF 172 + L+ + I +F F Sbjct: 134 IPGLLAGLLGYLVFRNRLKGVYFSILTQAGTIVFFNFFNGQQQFFNGTNGLIDFTTLFGA 193 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 S + Y + + + I WL IRD++ K+ Sbjct: 194 TVSDAKTQFVFYTLTVVFLAATYGICRWLTTGRFGRLLIAIRDDESRVRFSGYDPTDFKV 253 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 FAVS A G+AGAF+ +SP + +I ++ V +GG +L T ++ Sbjct: 254 LVFAVSGAIAGIAGAFYTIQSGSVSPRAMDIAFSIEMVIWVAVGGRATLIGAIVGTLLVN 313 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +V+ + ++ Sbjct: 314 YARTFLSE--------------QFAEIWLFFQGALFLIVVTVLPDGIVG 348 >gi|188591677|ref|YP_001796276.1| putative Branched-chain amino acid transport system, Inner-membrane component [Cupriavidus taiwanensis] gi|170939072|emb|CAP64088.1| putative Branched-chain amino acid transport system, Inner-membrane component [Cupriavidus taiwanensis LMG 19424] Length = 334 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 124/317 (39%), Gaps = 15/317 (4%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 L + + ++I+ + +FA ++++G GLLS + Y Sbjct: 1 MLGIALLLPNFVYPVLLMKIMCFALFACAFNLLMGFTGLLSFGHAALFGAAGYVTGYAAR 60 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 G+ + I + ++S G +M +++ +G Y + TL ++++ + ++ +T G Sbjct: 61 DLGIPMEGAIVLGMVVSAILGFLMASLAIRRKGIYFTMITLALAQMVYFVCLQAP-VTGG 119 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + G+ R + + MY+V+L + + ++I + ++ Sbjct: 120 EDGMQGIPR-------------GKLLGVLDLGDDTTMYFVVLAIFVAALALITRIVQSPF 166 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +++N+ SL KL AF +SS G+AG+ A + + + Sbjct: 167 GQILRAVKENEPRSISLGYDADRYKLMAFVLSSVLTGLAGSVKAIVLGFETLVDVHWGLS 226 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMV 325 +V+ + ++GG+ +L +++ + + + +++ + T + Sbjct: 227 GMVVLMTLVGGVGTLIGPIVGAVVIMVLENELGEIGEALATATHIEWFDALGESVTIVTG 286 Query: 326 IALFLVILMRSHSLLRL 342 + +L+ + Sbjct: 287 LTFIFCVLLFRKGIAGE 303 >gi|187929271|ref|YP_001899758.1| urea ABC transporter permease protein UrtB [Ralstonia pickettii 12J] gi|187726161|gb|ACD27326.1| urea ABC transporter, permease protein UrtB [Ralstonia pickettii 12J] Length = 543 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 269 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRTYFPSAFDWYLPAALPAAFLAAAIVGFA 328 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 329 LER--LVLRHLYGRPLETLLATFGISLLLMQAVRSIFGAQNVEVANPSWMSGGIALYPGL 386 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +LL + A L RT + R N+ + AFA Sbjct: 387 ILPYNRLVILLFALAVVAIAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 446 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L + + Sbjct: 447 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 504 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++++ + L I R L L+ S Sbjct: 505 IEPFYGAVLAK-------------IIVLVLIVLFIQKRPQGLFALKGRSAE 542 >gi|206895708|ref|YP_002247684.1| branched-chain amino acid ABC transporter, permease protein [Coprothermobacter proteolyticus DSM 5265] gi|206738325|gb|ACI17403.1| branched-chain amino acid ABC transporter, permease protein [Coprothermobacter proteolyticus DSM 5265] Length = 317 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 74/307 (24%), Positives = 135/307 (43%), Gaps = 29/307 (9%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 ++ I + +IY + A GL++++G G +SL IG Y+ IL RYG+ Sbjct: 21 FNARPSIVAYINLAIIYAVSAVGLNLLLGVAGQISLGHAAFMGIGGYTSAILMIRYGIPS 80 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + + +++G G+I+G P+L+ +G YLAIAT+ + +++ + + + G+ Sbjct: 81 IVSVLAGGLLAGLFGLIIGFPALRLKGFYLAIATMALGTAVTDVIKRMEIL-GADRGLTN 139 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 + G S + + ++ IF ++ L ++ A+R Sbjct: 140 VPPVTIFGYQFSSEFAKYYLYLAILLLTIF--------------LVNNLLKSKTGMAFRA 185 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 +RD++ A I + K+ AF +SS G+AGA + S + PDMF F +I ++I Sbjct: 186 MRDSEVAAKVFGINISYYKVLAFVISSFLAGVAGAMYGHSLSYLHPDMFGFGLSIEFLAI 245 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 I+GG+ +L +A+ + V L F L + L LV+ Sbjct: 246 TIIGGIGTLWGPVLGSALWVIVPRL--------------FGTKLEAMAGVLFGVILILVV 291 Query: 333 LMRSHSL 339 L L Sbjct: 292 LFLPRGL 298 >gi|327398220|ref|YP_004339089.1| ABC transporter integral membrane subunit [Hippea maritima DSM 10411] gi|327180849|gb|AEA33030.1| ABC-type transporter, integral membrane subunit [Hippea maritima DSM 10411] Length = 314 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 30/322 (9%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L + S+ LIY A IV+G G+ + I + +GAYS Sbjct: 11 VFFAALIIVPFIFNSNWTSVFTTFLIYSAVALSQDIVLGRAGMFDMGHAIFFGLGAYSTA 70 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKWK 141 IL YG I IPV+ ++ +++ P + RGDYL + T+ + +F L Sbjct: 71 ILNMVYGWPILATIPVAIILPVIASILLAAPIIHLRGDYLLVTTIGFNIVFIQALKNNVF 130 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 IT G GI+ + L G + S +Y++ + L+ II L Sbjct: 131 GITGGPNGIFGVEPLKLFGFSFSSQT--------------SIYFLAFFVLILTLIIIHNL 176 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + A + ++ A + F +L AF +S+A G+AG F +SPD F Sbjct: 177 ETSKPGRALHYLNEDSLASECIGINTRFYRLYAFGLSAAVAGLAGVVFTLQFSAVSPDAF 236 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F ++++ +IV++GG +S+ + T + V E+ Sbjct: 237 DFIQSVLFFTIVLVGGPSSIPGVLLGTFFMFVVPEMFRQFAE---------------ARY 281 Query: 322 TLMVIALFLVILMRSHSLLRLR 343 + IA+ L+++ R + ++ Sbjct: 282 LVFGIAMILIMIFRPKGIWPVK 303 >gi|300697314|ref|YP_003747975.1| ABC transporter permease/ATP-binding protein [Ralstonia solanacearum CFBP2957] gi|299074038|emb|CBJ53575.1| ABC transporter, permease protein (N-ter) and ATP-binding protein (C-ter) [Ralstonia solanacearum CFBP2957] Length = 608 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 113/299 (37%), Gaps = 15/299 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V +++ L + ++ ++ I +Y + A GL ++ G GL S +G Sbjct: 22 LLTVAFVIVLALLPVLPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS L ++YGLS WL + I+ A ++GL +++ G YL +AT+ + Sbjct: 82 AYSTAYLTTQYGLSPWLGLLAGLTITMASAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + I + M+Y++ + ++ Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNLLGKPLQSGREMFYLIWAVVVVAVLA 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + A R ++ ++ + K+ F ++ ++G +A + ++ Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVAAAILACISGFLYAHLQRAVN 246 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P F + I + + ++GG+ + +L + + + S F+ Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQSLLPQLLGSTGNFEIIV 305 >gi|284166156|ref|YP_003404435.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] gi|284015811|gb|ADB61762.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] Length = 652 Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 75/335 (22%), Positives = 137/335 (40%), Gaps = 15/335 (4%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L+ + LA V L L T Y ++ I+IL++ +FA L V+G GL+S Sbjct: 304 LDDRTRKWVGLAAVGLLALLPLGAGTFYSTYTVTLAIEILVWALFALSLDFVMGYTGLVS 363 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L + Y +GAY+ I+ S ++ I ++ +IS A ++G S++ G Y A+ TL Sbjct: 364 LGHALFYGLGAYAVAIVLLHVSQSAFVAIGLAIVISAAIAWVVGYLSIRVSGVYFAMITL 423 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +E+F N+L + + + ++ G + + + YY+ Sbjct: 424 GFAELFYNMLYRLEITGGSEGLFGISTYYGIAGVGIALDEIGLFLGPVALTGQSLFYYIA 483 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L S + + + + ++IR+N++ L K AF VS A G+AG Sbjct: 484 LAALIGSFLLTRRMLNSPFGSVLKSIRENEQRATFLGYETTRYKRRAFVVSGALAGLAGG 543 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F + +P + + VI +VILGGM +L + + G+ E+ + Sbjct: 544 LFTLNSGYAAPSFAYWLHSGEVIVMVILGGMGTLYGPIVGSTVFFGLEEILTDFTPRW-- 601 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ L ++ L+ L Sbjct: 602 -------------RLVLGTLFLLFVIFLPRGLVSL 623 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 105/303 (34%), Gaps = 27/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97 + ++YV+ A GLS++ G + +++ +A+GAY + ++ G + + + Sbjct: 9 LVDGLTIGVVYVLLAAGLSVIFGVMHVINFAHGELFALGAYFALALITPFGGTAFFAALF 68 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 V+ ++ G G+ + +++ + ++++ ++ + + + Sbjct: 69 VAPLLVGILGVAIERFTVRPLYGRNPLYHILLTFGLVLVINDLIYLIWEPGNVNLPTPAI 128 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 GT + ++ +V++ ++ S+ L T R ++ Sbjct: 129 LSGT----------IDVIGLNASVYNVFVIVFGAAMALSVWAMLEYTKYGLIIRAGSQDR 178 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + +L I F + +A +AG + S I IV+LGG Sbjct: 179 QMVRNLGIDIDRYYSLVFGMGAALAAVAGIILGGYQTV--SPEMGMSVIIPAFVIVVLGG 236 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S ++ + L ++ + + ++L+R Sbjct: 237 LGSFKGAVAGGLLVGIIQTLLRTYAPILEG--------------MVIFLLMISILLVRPR 282 Query: 338 SLL 340 L Sbjct: 283 GLF 285 >gi|116748303|ref|YP_844990.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116697367|gb|ABK16555.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 345 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 124/347 (35%), Gaps = 45/347 (12%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + ++ + +Y + + +++ A ++V G G+L L AIGA Sbjct: 13 AALLLAACVIYAFSRYGSEYHIRILNNMAVFIALAVSYNLVNGFCGILHLGPNGFIAIGA 72 Query: 79 YSYVILGSRY-------------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 Y+ +L + L + + +++G + + P + RG Sbjct: 73 YTAALLTMSPAEKQLNFIIEPLIWPLNVIQVPFALSLVAAGLVAGLFALAISFPVFRVRG 132 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL E+ + + ++ +TNG G+ Sbjct: 133 DYLAIVTLGFGEVVRVLCNAFQNVTNGPLGLKGLVPHTN--------------------- 171 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + G+ + ++ L ++ A + IR+++ A S+ L AF +S+ Sbjct: 172 ----LWWSWGVAIATIIVVNRLMNSSYGRAMKAIREDETAARSVGIDPFRHLLLAFVISA 227 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 G+AG A ISP +F F ++ ++++GG+ S + A+ E Sbjct: 228 FISGVAGGLLAHLITTISPTLFTFFLTFNLLIMIVVGGLGSTTGAVVGAALFAWGGEALR 287 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + ++ + L LVI+ ++ S Sbjct: 288 IVERPMDLGIVIIP-GIPGMRMVVFSFILMLVIIFARRGIMGQNEFS 333 >gi|242238064|ref|YP_002986245.1| inner-membrane translocator [Dickeya dadantii Ech703] gi|242130121|gb|ACS84423.1| inner-membrane translocator [Dickeya dadantii Ech703] Length = 347 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 77/365 (21%), Positives = 132/365 (36%), Gaps = 44/365 (12%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + L +A+ L L + YI + I I+++ A +++ G G Sbjct: 3 MPQTSPATFLGYIALFALTFLALAALESLFDDYIVRIFCNIFIFMLLAVSYNLINGVTGQ 62 Query: 66 LSLNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGAC 106 LSL AIGAY I + S + +S + + Sbjct: 63 LSLEPNGFVAIGAYITAILLLTADTKINMFEMAAPSPVILILHTSFLPALVISGICASVV 122 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 + + P + RGDYLAI TL I + I ITNG GI + Sbjct: 123 AVCLAFPVFRVRGDYLAIVTLGFGFIIKIFAINNPQITNGAIGINEIPQASH-------- 174 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + Y + ++ +IL L + A + +RD++ A ++ Sbjct: 175 ----------------ILYWCGFIALIAVVLILQLVYSKYGRAMKAVRDDEDAAIAMGIN 218 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 K AFA S+ F G+ G A+ ISPD+F F ++ I++LGG+ S + Sbjct: 219 TFKIKTCAFATSAFFEGIGGGLLASLLTIISPDLFDFMLTFQLLIIIVLGGLGSTTGAIL 278 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 T +++G E ++ F + + L +++L LL + Sbjct: 279 GTVVVVGSGEWLRFLDQPLTLFGQDFGAH-PGLRMVVFSLVLLVIMLFAREGLLGKQEIW 337 Query: 347 NFLER 351 + R Sbjct: 338 DMRRR 342 >gi|313902320|ref|ZP_07835724.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter subterraneus DSM 13965] gi|313467368|gb|EFR62878.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter subterraneus DSM 13965] Length = 342 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 30/310 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y +G ++ + L+ ++G G +L +A GAY+ IL +R + + +L Sbjct: 37 NGYYLEIGFNFFLWAVLGLSLNFILGGTGQYNLGHAAFFAAGAYTTAILNTRLDIPVLVL 96 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKWKPITNGKAGIYVAD 154 PV+A+++G + + P + RGDYL I T+ +EI + L +T G GI D Sbjct: 97 APVAALVAGVLAVAVARPIIHLRGDYLLIVTVGFAEIVRITLRNNVFGLTGGSNGILGID 156 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 R LG + + + ++ +F I + L + I AW IR Sbjct: 157 RPVILGFRLAQMSHLYYLSLVLLLLTLF--------------IAVRLENSRIGRAWSYIR 202 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 +++ A ++ K+ AFAV A G+AG +AA I+P+ F F E++++ +IVI Sbjct: 203 EDEVAAAAMGIDTGRYKVLAFAVGGALAGLAGNVYAAKMTVIAPESFSFWESVVMFAIVI 262 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 LGG S+ + T ++ + +L G+ Y + A+ L+++ Sbjct: 263 LGGTGSIPGVFLGTFGMVVLPQLFRGLADY---------------RMLVFGAAMVLLMIF 307 Query: 335 RSHSLLRLRT 344 R L R Sbjct: 308 RPEGLWPNRR 317 >gi|296453275|ref|YP_003660418.1| inner-membrane translocator [Bifidobacterium longum subsp. longum JDM301] gi|296182706|gb|ADG99587.1| inner-membrane translocator [Bifidobacterium longum subsp. longum JDM301] Length = 473 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 28/305 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I L+ + + G+++V G+ GL S + +G + + + + +I Sbjct: 193 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAFVGTQMLHMPLVASAIFAVII 252 Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 G I R + +I++ L G + Sbjct: 253 GALTGFIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 305 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 F + ++ L + + L+L +T + A R + DN Sbjct: 306 -----KSVPNSFQIGPITTDMPTLLSALIAICVIVGVTLFLYKTRLGRATRAVSDNAALA 360 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + + +S A ++G + IS + + +++ + V LGG+ + Sbjct: 361 AASGINVDQVVRVVWILSCAMAALSGVLLGVYLNGISWNT-GATLILLMFAAVTLGGLGT 419 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + ++ V ++ + N + L +V+L+R + Sbjct: 420 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 466 Query: 341 RLRTP 345 + Sbjct: 467 GKQQR 471 >gi|218674050|ref|ZP_03523719.1| amino acid ABC transporter, permease protein [Rhizobium etli GR56] Length = 201 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 108/187 (57%), Gaps = 2/187 (1%) Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + F+ P S Y+IF++Y++L +C L+A + + LRR I AW +R+++ A SL Sbjct: 3 GFAKLFQLPMSSAYYKIFLFYLILMLCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLG 62 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + KL+AFA + F G AG+FFAA + +SP+ F F E+ +V++IV+LGGM SL+ I Sbjct: 63 INTVTTKLTAFATGAMFGGFAGSFFAARQGFVSPESFIFLESAVVLAIVVLGGMGSLTGI 122 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 A A +++G E M+ + ++ D + + L +A+ +V+L + + R Sbjct: 123 AIAAIVMVGGTEALREMD--FLKAVFGPDFTPELYRMLLFGLAMVVVMLFKPRGFVGSRE 180 Query: 345 PSNFLER 351 P+ FL+ Sbjct: 181 PTAFLKE 187 >gi|163792464|ref|ZP_02186441.1| ABC-type transporter, permease component: HAAT family protein [alpha proteobacterium BAL199] gi|159182169|gb|EDP66678.1| ABC-type transporter, permease component: HAAT family protein [alpha proteobacterium BAL199] Length = 358 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 127/328 (38%), Gaps = 13/328 (3%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + + + + ++ ++ S+ I +LI + A GL+I+ G G +SL A Sbjct: 27 LFVIGVVVAAIVVVPLISNEYWLGSIMIPVLILSIAALGLNILTGYCGQVSLGTGAFMAA 86 Query: 77 GAYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY + + + L+I + + + + G+ GLPSL+ +G YLA+ TL Sbjct: 87 GAYMAYKIATNFTWMPIPLVIVLGGLCAASIGLAFGLPSLRIKGFYLAVTTLAAQFFLLW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + K N A F + Y +L + A Sbjct: 147 LFQKVPWFVNNSASGVPTAPP---------RSVFGELVTGAEATPEARYLFVLAFTVVLA 197 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254 I L R I W IRD A + + KLSAFA+SS + G++GA ++ + Sbjct: 198 VIAGNLVRGRIGRTWMAIRDMDIAAELIGIRPLHTKLSAFAISSFYCGVSGALWSFCYIN 257 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + F + +++ +VI+GG+ S+ + + + + L Sbjct: 258 TVESSAFDIFRSFMILFMVIVGGLGSVLGSFLGAFFIFLLPIALNNVVTTF--GLPIATE 315 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +++ H L RL Sbjct: 316 TISHIEFMAFGGLIVFFLIVEPHGLARL 343 >gi|331696418|ref|YP_004332657.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326951107|gb|AEA24804.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 373 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 127/324 (39%), Gaps = 33/324 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L+ LF + Y+ + L+Y + G +++VG G + L +A+GA Sbjct: 43 IVAIVALVVLFAVPFVANSYLVFVLSLTLVYAISTVGFNLLVGWSGQIGLAHAALFALGA 102 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y I + IP++ + + +I+G P+++ +G +LAIATL + +L+ Sbjct: 103 YGSAISVQHGVP-FLITIPLAGVAAALLAVIIGFPAVRLKGFFLAIATLALGMAIVELLV 161 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +PIT G AG+ + + Y+V+L + L+ + Sbjct: 162 FARPITGGGAGMN-----------------VDVWTLPGITGSASTYFVILVVAALTFFLT 204 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + +RD SL +++ +L AF +S +AG ++ + I P Sbjct: 205 RRALLGRFGRTLQAVRDLGPLTGSLGVSVLRYRLVAFGLSGFIAAVAGTLYSQLQTFIFP 264 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 MF + + ++ +V +GG SL A + ++E + Sbjct: 265 AMFHMNLLVPMLVMVFVGGAGSLWGPLVGAAFAVVIIEFFQDL---------------GD 309 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + L +VI + L L Sbjct: 310 QQAIAYGLVLMVVIALLPGGLTSL 333 >gi|256845864|ref|ZP_05551322.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. 3_1_36A2] gi|256719423|gb|EEU32978.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. 3_1_36A2] Length = 324 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 73/335 (21%), Positives = 138/335 (41%), Gaps = 45/335 (13%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L +V +LF + + +Y + I ILI V+ L++ VG LG ++L +I Sbjct: 14 VLLIVLYFILFSLINSGFISRYQVGILILILINVILVASLNVTVGCLGQITLGHAGFMSI 73 Query: 77 GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 GAY+ +L + + + +++G G I+G+P+L+ GDYLAI TL EI Sbjct: 74 GAYTAALLTKSGFLSGYPGYIVALIIGGLVAGLIGFIIGIPALRLTGDYLAIITLAFGEI 133 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +LI++ T G G+ R+ ++ + Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LIYFITI 167 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S + + + A IR+++ A + + K AF +S+ F G+AG +A + Sbjct: 168 FSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + F ++ +I ++ +V+LGGM S + + +L + E+ Y Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +++L R LL Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307 >gi|254452766|ref|ZP_05066203.1| permease protein, haat family [Octadecabacter antarcticus 238] gi|198267172|gb|EDY91442.1| permease protein, haat family [Octadecabacter antarcticus 238] Length = 380 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 68/340 (20%), Positives = 129/340 (37%), Gaps = 32/340 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------YG 89 Y S+ IY +FA GL++ G GL ++ V A+GAY+Y +L + +G Sbjct: 24 YFLSLLTVGGIYSIFALGLNVNWGFAGLFNVGIVGFAAVGAYTYALLTTAESTYHIGGFG 83 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + + + M S +GL ++ R DYLAIAT+ ++EI + IL ITNG G Sbjct: 84 LPLPFGMFAAMMTSAVIAGFIGLICIRLRADYLAIATIGIAEIIKLILKNETEITNGPRG 143 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSF-------------VIYEIFMYYVLLGMCFLSAS 196 I R + + R + ++ +L + ++ Sbjct: 144 INKIPRAWEHFSEERFYTSWPMSWFGTLENWEAFFDTLPNWYWQPLFAGTILLVMYVIYR 203 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ R + IR+N+ A + + ++ AF + +A +G+AG+ FA I Sbjct: 204 MLERARTSPWGRMMTAIRENEPAARAAGKDVTRRRIEAFIIGAAIMGLAGSLFAQHLRLI 263 Query: 257 SPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 P +V ++I+GG + ++ + + + Sbjct: 264 EPTNTFDPSKVTFLVWVMLIVGGSGNNRGAMLGAFLIWTLWSASELFITGAIDLIGNIFS 323 Query: 315 SF---------NMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + L+ I + +++ +L P Sbjct: 324 TLDPSILQTRAGFLRMMLIGILMQVILQRYPGGILPEVRP 363 >gi|149194943|ref|ZP_01872036.1| high affinity branched-chain amino acid ABC transporter, permease protein [Caminibacter mediatlanticus TB-2] gi|149134864|gb|EDM23347.1| high affinity branched-chain amino acid ABC transporter, permease protein [Caminibacter mediatlanticus TB-2] Length = 352 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 75/357 (21%), Positives = 136/357 (38%), Gaps = 47/357 (13%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L + + V L FL+ Y ++ I I+++ A +++ G G S Sbjct: 11 LTPKEYFSLIAIVTALFLAFLYFSPKIFSDYTLTVLGNIYIFIILAISYNLINGVTGQFS 70 Query: 68 LNCVIAYAIGAYSYVILGSR--------------------YGLSIWLLIPVSAMISGACG 107 L AIGAY IL Y +L + +S +++ Sbjct: 71 LEPNGFVAIGAYVTAILMLSPELKSEIYMLTNPLPFIKEAYIPIPFLALIISGVVASLVA 130 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + + P + RGDYLAI TL I + LI ++NG G+ Sbjct: 131 LTLAFPVFRVRGDYLAIVTLGFGFIIRIFLINTPSVSNGSMGLDSIP------------- 177 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 Y+++ + +S ++ + + A +++RD++ A ++ Sbjct: 178 ------------GFASYFLIGVVALISIILVYNIVYSRYGRAMKSVRDDEDAALAMGINT 225 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 K AF S+ F G+ G A+S ISPD F F ++ I++LGG+ S+S A Sbjct: 226 FKIKTMAFMTSAFFEGVGGGLLASSIGSISPDQFTFMLTFQLLIIIVLGGLGSMSGAIFA 285 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 T + IG +E+ ++ + L + + L L++L + + Sbjct: 286 TFLFIGGMEILRPLDDASWQ--LGPIHGIPGLRMVVFSLILLLLMLFARRGIFGDKE 340 >gi|317154667|ref|YP_004122715.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] gi|316944918|gb|ADU63969.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] Length = 356 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 117/341 (34%), Gaps = 6/341 (1%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + LL+ YI ++ + + I ++ + L++V G++G S + Sbjct: 8 FVLAASCLLMLAMAQYGLIDNYIQAVFMFVGINIIMSTSLNLVNGNMGEFSCGHAAFMCV 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY +L + + A ++ ++ I L + + Sbjct: 68 GAYVSSVLSVLCFGKLLGGPLLPASMAVFVFPLIIFIGGAVAALAGIIVALPSFKTRGDY 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L N + + G+ ++ + +M ++ + Sbjct: 128 LAIITIAVNYMIISAIENMPSIGGSRGFQGMKDTVWAMVDTFNGPWMLLWVILFTVFTVW 187 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 II + I ++ A ++ KL F +SS G+AG FA + Sbjct: 188 IIRRFISSTYGKGVNAICQDEIAAEIMSVNTDRMKLVTFMLSSGLAGIAGGLFAHIVGYV 247 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG------MNFYYFNSLL 310 +P F ++ + +V LGGM SLS + + G++E+ + Sbjct: 248 NPQSFNILKSTEAMVMVYLGGMGSLSGAVLSAILFTGLMEVLRSQSLIEFILSPVTFVFP 307 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ S + L+ + L L++ R ++ + S+ + Sbjct: 308 DWEPSAGVIKWVLIPLILVLLMQFRPEGIMGNKELSDVFPK 348 >gi|92113544|ref|YP_573472.1| inner-membrane translocator [Chromohalobacter salexigens DSM 3043] gi|91796634|gb|ABE58773.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Chromohalobacter salexigens DSM 3043] Length = 314 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 128/324 (39%), Gaps = 27/324 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88 Y+ S +Y + A GL++ G G ++ +A+GAY+ IL + + Sbjct: 8 SYLISFLTFAGVYAVLALGLNMQWGFTGQFNIGIAGFFAVGAYTSAILTTPSSPAYLGGF 67 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 G+ + + + + S G+++GL + + R DYLAIA++ ++E+ + + +TNG Sbjct: 68 GMPFLVGLAGAVIASTLLGLVVGLITARLRTDYLAIASIGIAEMVRLFVKNEDWLTNGVR 127 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 GI +R F + + + ++ ++ + Sbjct: 128 GIAGIERP---------------FADTVLDSPLTYLVIVALFVAGVYFLVERAYASPWGR 172 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE-NI 267 R IR+N+ A + +I +L AF + SA +G+ G +A +SP+ F Sbjct: 173 VLRAIRENEPATAAAGKSIAGFRLQAFVLGSAIMGLGGGLYAHFFGFLSPEAFMPLYGTF 232 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 +V ++I GG + ++ GV + L+ + Sbjct: 233 LVWVMLIAGGSGNNRGAILGAVLVWGVWSGTELLTGLLPAEH---ATQGAALRVLLIGVL 289 Query: 328 LFLVILMRSHSLLRLRTPSNFLER 351 L ++++ R +L + P + Sbjct: 290 LQVILVTRPEGVLPEKPPRLIARK 313 >gi|83747455|ref|ZP_00944494.1| LivM [Ralstonia solanacearum UW551] gi|207739603|ref|YP_002257996.1| transmembrane protein [Ralstonia solanacearum IPO1609] gi|83725912|gb|EAP73051.1| LivM [Ralstonia solanacearum UW551] gi|206592983|emb|CAQ59889.1| transmembrane protein [Ralstonia solanacearum IPO1609] Length = 322 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 123/325 (37%), Gaps = 24/325 (7%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 +L L ++G ++L+ + A ++ ++G G+LS + +GAY Sbjct: 18 ALWAVLLLAPYWMPLLGGYTALGTRVLVLGLAAMSVNFLLGFTGVLSFGHAAYFGLGAYG 77 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 S L + ++ G G ++G S++ RG Y A+ T+ ++F I +W Sbjct: 78 AGFALKFLAPSTPLALVCGTLLGGIAGALLGALSVRRRGVYFAMVTIAFGQVFYYIAFQW 137 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G G+ R+ + + YY +L L+ ++ + Sbjct: 138 SSLTGGDDGLRGFSRMP---------LDLGFTTLDILSNADAFYYFVLACLALATGLMAF 188 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + R+ + IR+N++ L + AF +S F+G AGA +A + P Sbjct: 189 VLRSPFGHTLIAIRENERRARFLGIPVNRHIWIAFTLSCFFMGFAGALYALLNNFADPRG 248 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 +S++ + + ++GGM S + + + + + + Sbjct: 249 LHYSQSGDFVMMAVMGGMRSFWGPLLGAVVFVVLQDYLSSL---------------TVNW 293 Query: 321 TTLMVIALFLVILMRSHSLLRLRTP 345 + + + ++L LL + Sbjct: 294 MSFVGMLFVAIVLFFPRGLLGVLRR 318 >gi|323341215|ref|ZP_08081462.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus ruminis ATCC 25644] gi|323091409|gb|EFZ34034.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus ruminis ATCC 25644] Length = 324 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 140/335 (41%), Gaps = 44/335 (13%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 LL VV +L+ + + ++M + I I ++ A GL++V+G G SL Sbjct: 14 WLLLMVVGFVLINFLVMIGVIDSFTENMLVTIGINIILAVGLNLVIGFSGQFSLGHAGFM 73 Query: 75 AIGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AIGAY+ I+ S + + V I+ +I+G+P + GDYLAIAT+ +E Sbjct: 74 AIGAYATGIMTLGGFDSFGGWIVSVLVGMAIAAVVAIIVGIPCFRLSGDYLAIATMGAAE 133 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + +L ITNG AG++ + ++ + Sbjct: 134 IVRIVLNNM-KITNGPAGLFNIPQYTTWP-------------------------LVYVLT 167 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ + + + A ++RDN+ A ++ KL+AF + + +AG+ A+ Sbjct: 168 CLTTIVTVNFIHSRGGRAVMSVRDNEIAAEAMGINTTRWKLAAFVLGAVTAAIAGSLSAS 227 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 I+P + +++ ++ IV+LGGM S++ A +L + + Sbjct: 228 YIQTIAPSNYGIMQSVSILIIVVLGGMGSMTGTFVAAVVLGILDTVLQSF---------- 277 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + I L L+++ + L+ S Sbjct: 278 -----GVLRMVIYAIVLILMMVFKPSGLMGTNELS 307 >gi|296161705|ref|ZP_06844508.1| inner-membrane translocator [Burkholderia sp. Ch1-1] gi|295888019|gb|EFG67834.1| inner-membrane translocator [Burkholderia sp. Ch1-1] Length = 355 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 73/336 (21%), Positives = 136/336 (40%), Gaps = 16/336 (4%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + LA V L+ F+ + + +++++ I L+ + GL++V G G LSL Sbjct: 19 QQRPLLKVWLAAVLVLIAFVVVPVFGNDYWLNAILIPFLVLSLAGLGLNLVTGYAGQLSL 78 Query: 69 NCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 ++GAY+ +L L + + + + +IS G + GLPSL+ +G YL ++TL Sbjct: 79 GSAAFMSVGAYATYNLLVRVPALPLAVDLLLGGLISAVVGALFGLPSLRIKGFYLIVSTL 138 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + I + +N ++ + Y + Sbjct: 139 AAQFFVEWIFTRVSWFSNDDTSGVLSAPRLTAFGWK-------------IDTPAARYLFV 185 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 LG+ + + L R+ + W +RD A + I KL AFA+SS G+AGA Sbjct: 186 LGVTSVLFILAARLVRSELGRRWMAVRDMDTAARVIGIPIGRTKLLAFALSSFVTGIAGA 245 Query: 248 FFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A A + P F + + V+ I+I+GGM+S+ A ++ + L Sbjct: 246 LWAFAYLGTVEPHGFDLNLSFQVLFIIIIGGMSSIGGNFLGAAFIVLLPILLSNAAGA-L 304 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ L + + ++ L RL Sbjct: 305 ATVGIEAGQLQNLQKILFGTLIIVFLIKEPDGLARL 340 >gi|313114518|ref|ZP_07800032.1| amino acid or sugar ABC transport system, permease protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310623141|gb|EFQ06582.1| amino acid or sugar ABC transport system, permease protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 386 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 112/334 (33%), Gaps = 23/334 (6%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + ++ + IY + A ++++ G GL SL +GAY+Y IL Sbjct: 33 FVPSMLLTVLRKGAIYALVAVSMNLLNGFTGLFSLGQAGFMLLGAYTYAILTIPAASQKS 92 Query: 94 LLIPVSAMISGA-----------CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + G ++ A + +K Sbjct: 93 IYQRYANGGIGFSIPELLSKPLGGFGLLLGVVFCLILAGFIAALFAFLIGLPVLKLKSDY 152 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL-----------LGMC 191 + G R + L F + F + Sbjct: 153 LAIATLGFAEIIRAAVVYEGFGPLTNGSNLLYGFTSFASFNLSLGGTTLHLETVMPFLFS 212 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + +IIL L + A++ IRD++ A ++ + K +F +SS F G++GA A Sbjct: 213 GICIAIILLLINSTYGRAFKAIRDDEIAAEAMGINLASHKRMSFIISSFFAGISGAMLAM 272 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE-LCCGMNFYYFNSLL 310 + + FK S ++ IV++GG+ S+S A+ + I E L ++ + Sbjct: 273 YQASVQATTFKSSMTYEILLIVVIGGIGSVSGSIIASFLFIASSEWLLRFLDNETWIGGF 332 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + + I + V+L ++ R Sbjct: 333 RVPLLRSGFRMVVFSIIIMAVVLFFRKGIMGDRE 366 >gi|259048102|ref|ZP_05738503.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] gi|259035163|gb|EEW36418.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] Length = 323 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 75/343 (21%), Positives = 136/343 (39%), Gaps = 43/343 (12%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R +K + L A+ LLF+ + Y +S I I+I +++A GL++++G G Sbjct: 6 RFHKKNIRWTLFALGMYALLFVLVQTGVINFYYESTFINIMINIIYAVGLNLILGVAGQF 65 Query: 67 SLNCVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 SL AIG+YS I ++ + V +IS ++GLP+L+ +GDYLAI Sbjct: 66 SLGHAGFIAIGSYSGAILGKMINGLPGLFAGMAVGVVISVIVAFLVGLPTLRLKGDYLAI 125 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 ATL ++EI + + K I + Sbjct: 126 ATLGVAEIIRVAVTNMKITNGAA--------------------------GISGIPLTNTW 159 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + ++ +IL ++ A + ++ A S+ + K+ AF + +A + Sbjct: 160 TITYIFLVVTTILILNYTFSSAGRATYGVLQDEIAAESMGVQVTKYKILAFVLGAATASI 219 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G A + ++P F F ++I V+ IV+ GG+ S + A +L + + Sbjct: 220 GGTLSATTLGAVTPGDFTFMKSIDVLIIVVFGGIGSFTGSFVAAVLLGIINLVLQ----- 274 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F + +AL L+++ R LL Sbjct: 275 ----------PFGQLRMIIYAVALILIMIFRPGGLLGTWEFKL 307 >gi|144901056|emb|CAM77920.1| Ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion protein [Magnetospirillum gryphiswaldense MSR-1] Length = 528 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 88/297 (29%), Gaps = 16/297 (5%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL++ G +G++++ +GAY+ + + + + +++ + Sbjct: 247 AAIGLAVTFGVMGVINMAHGEMIMLGAYTTFAVQQLFRALLPPDLVDLYLVAAIPAAFVV 306 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + I L + +L W + + + + + Sbjct: 307 TALVGMGLERGVIRFL-YGRPLETMLATWGISLVLQQVVRQIFGATNMEVANPAWMTGGW 365 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + ++ + + LR ++ R + N+ ++ Sbjct: 366 ELAGGFTLTYNRVIIIFFCLAVLGGLAALLRWSSFGLHMRAVTQNRPMAAAMGIPTGRVD 425 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ + + +V+ GG+ SL L Sbjct: 426 ALTFGLGSGIAGIAGV--ALSQIGNVSPNLGQAYIVDSFMVVVFGGVGSLWGTLVGAVSL 483 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 V + L+++ + L I R L L+ S Sbjct: 484 GVVNKFLEPYAGAMLGK-------------ILVLVFIILFIQKRPRGLFALKGRSVE 527 >gi|293603600|ref|ZP_06686021.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gi|292818036|gb|EFF77096.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 597 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 110/334 (32%), Gaps = 14/334 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ L L LG + ++ I +Y + A GL ++ G GL S +GA Sbjct: 5 IILVAFLALLALGPLALPPFYVTLLNYIGLYALVALGLVLLTGVGGLTSFGQAAFVGVGA 64 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L +R L ++ + + ++ +L YL A + + Sbjct: 65 YTTALLTTRADT---LPSWLAWLGASPWLTLLAGLALTLLIAYLLGAITLK---LSGHFL 118 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY-EIFMYYVLLGMCFLSASI 197 I G + + + LG + + +YY++ ++ Sbjct: 119 PLGTIAWGLSLYFAFGSVEGLGGHTGIPDIPAINLFGWTLNQGGSIYYLIWAFLLVAVWS 178 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L + A R ++ + S+ +++ F +++ +G +A + ++ Sbjct: 179 TQNLLDSREGRAIRALKGGRVMAESMGVNTARSRMVIFIIAALQACASGWLYAHMQRFVN 238 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F I + + ++GG + + + + F Sbjct: 239 PNPFGLQMGIEYLFMTVIGGAGQVWGALVGAGVFTVLKQWLQDWLPKLLGQTGNF----- 293 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L++ L + T +++ Sbjct: 294 --EVIVFGFGMVLLLHRARSGLWPVLTRWIRVKK 325 >gi|329924203|ref|ZP_08279390.1| urea ABC transporter, permease protein UrtC [Paenibacillus sp. HGF5] gi|328940813|gb|EGG37126.1| urea ABC transporter, permease protein UrtC [Paenibacillus sp. HGF5] Length = 362 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 94/333 (28%), Gaps = 27/333 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 +LL + L + + + + L + A GL ++ G G+LSL + + +GAY+ Sbjct: 21 AVLLLMCLAPLFTTPFRLGLLTKFLALAILAVGLDLIWGYGGILSLGHGVFFGLGAYAMA 80 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLP-------------SLKFRGDYLAIATLIM 129 + L + + Sbjct: 81 MYLKLDASGSALPDFMGWSGVASLPWFWEPFRSFPAALILGMLLPALLALILGFFTFRNR 140 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 ++ + + F + +I +Y++ L Sbjct: 141 IVGVYFTILTQALVMIVVTLFVGKQEWTGGTNGITGYSSVLGFNLNAPSTKIGLYFITLA 200 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + + RD + L K AFAVS G+AG F Sbjct: 201 ALAGAYILCRRIVNSRVGQVLEASRDGENRVRFLGFDPSRYKTFAFAVSGGLAGLAGMLF 260 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 ISP M +I ++ V LGG +L +L + Sbjct: 261 VLQVGIISPSMMGIVPSIEMVLWVALGGRGTLIGAIIGAVLL--------------NAAK 306 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ ++ +V+++ L L Sbjct: 307 TGISEAYPEGWLLVLGALFVIVVVLMPRGLTGL 339 >gi|312796327|ref|YP_004029249.1| branched-chain amino acid transport system permease protein livM [Burkholderia rhizoxinica HKI 454] gi|312168102|emb|CBW75105.1| Branched-chain amino acid transport system permease protein livM [Burkholderia rhizoxinica HKI 454] Length = 362 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 121/324 (37%), Gaps = 30/324 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ L+ Q ++ ++ +I I + A L +++G GL+S + + +GA Sbjct: 50 LIMAALIAVPLYAQATQQPFLLTLVTRIAILAIAAMSLDLILGVGGLVSFGHALFFGLGA 109 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L S WL + + +S ++ G +L+ RG + TL +++F + Sbjct: 110 YATGMLAQHGVSSGWLHLLCAVAVSVLVAVVTGAIALRTRGIAFIMITLAFAQMFYFFAV 169 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + +L +F + + + +Y V + + Sbjct: 170 GLREYGG---------------DDGFALAAGSQFGAVQLTDPLTLYVVSACLLMALLAFG 214 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 TA+ IR N++ +L K +A+ V++ +AG FA ++P Sbjct: 215 RHFLHTAMGMTLGGIRINERRMQALGIPTTRCKRAAYVVAAVLSSVAGMLFANLTQFVAP 274 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 ++ + +I +V++GG + ++ E M ++ Sbjct: 275 SYLSWTMSGDLIVMVVIGGAGTFIGAVLGAFAIVLAEEGLKAMTEHW------------- 321 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 +M + + +L+ H L L Sbjct: 322 --MLVMGPLIVVAVLVNRHGLAGL 343 >gi|126730461|ref|ZP_01746272.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] gi|126709194|gb|EBA08249.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] Length = 358 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 79/331 (23%), Positives = 144/331 (43%), Gaps = 13/331 (3%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L V L ++ T S+ ++ I +LIY + A GL+I+ G G LSL Sbjct: 26 AILLGVILLCAWVIFPLTASEFAFQTLLIPVLIYSLAALGLNILTGYAGQLSLGTAAFMG 85 Query: 76 IGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ ++ ++ + I +S + S G+ G+PSL+ +G YLAIATL Sbjct: 86 VGAYACYKLITLMPWMNPIVAILLSGVFSAGVGVAFGIPSLRIKGFYLAIATLAAQFFLV 145 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + KW + N V +L F + + I YYV+L + L Sbjct: 146 WLFEKWAWLYNYN---------ASGAIQVPNLEMFGVYVAGPQASSIVQYYVVLFIVCLL 196 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASR 253 + + L R + W+ RD A + ++ +KL+AFA+SS +G+AGA F R Sbjct: 197 TMLCINLTRGTLGRTWKATRDMDIAAELIGINLMRSKLTAFAISSYIVGVAGALFVFMWR 256 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 P++F + ++ I I+GG+ S+ +++G+ + + + Sbjct: 257 GAAEPNLFDIPLSFRILFIAIIGGLGSIMGNYLGAILIVGLPVVLNLLPNAL--GISIDS 314 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + ++ + +++ H L +L Sbjct: 315 ALVEHLNIMIVGSLIVFFLIVEPHGLAQLWR 345 >gi|145589383|ref|YP_001155980.1| inner-membrane translocator [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047789|gb|ABP34416.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 527 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 34/310 (10%), Positives = 83/310 (26%), Gaps = 17/310 (5%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + + ++ A GL+I G +G++++ +GAY+ ++ + + Sbjct: 234 NVIAGLSYGSVLLLCALGLAITYGLIGVINMAHGEFLMVGAYATYVVQGFFRQYAPGYLD 293 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + + + + + +L + Sbjct: 294 WYLLFALPVAFLSAALVGILIER--TVIKFLYGRPLETLLATFGVSLLMIQMTRTIFGAQ 351 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + ++ + + L L +T + R + N+ Sbjct: 352 NVEVANPIWMSGAMQVLPNLVVPYNRIIIFAFAIAVVIVTWLVLNKTRLGLFVRAVTQNR 411 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + + + AFA + G+ G A S+ S + +V+LGG Sbjct: 412 TMAACVGVKTVRVDMYAFAFGAGIAGLGGV--ALSQIGNVGPDLGQSYIVDSFMVVVLGG 469 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + L+ L +L + R Sbjct: 470 VGQLAGTIYGAFGLGITSKLLEPFIGAVLAKIAILIFIIIFIQR-------------RPQ 516 Query: 338 SLLRLRTPSN 347 L L+ S Sbjct: 517 GLFALKGRSV 526 >gi|120609478|ref|YP_969156.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120587942|gb|ABM31382.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax citrulli AAC00-1] Length = 354 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 23/344 (6%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 +++F + +++ + L + S + ++ + LI + A GL+I+V Sbjct: 17 LALFPVAQDRWALLALLAVAFVGV------PLVGSDYFFRAIAVPFLILSLAAIGLNILV 70 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG-MIMGLPSLKFRG 119 G G +SL A+GAY+ L R LL + + ++ G+PSL+ RG Sbjct: 71 GYCGQISLGTGAFMAVGAYAAYNLQVRIDGMPLLLALLGGGLCATVFGVLFGIPSLRIRG 130 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 YLA+ATL + K +TN ++ + + + Sbjct: 131 LYLAVATLAAQFFTDWFTNRVKWVTN-------------DSSSGSVSVGHLQILGLGIET 177 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + Y + LG + A + L R A+ W +RD A + ++AKLSAFAVSS Sbjct: 178 PVQKYLLCLGFVAVFALLAKNLVRGAVGREWMAMRDMDVAAAVIGIRPVYAKLSAFAVSS 237 Query: 240 AFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 +G+AG + P F + ++ +VI+GG+ S++ A ++ + L Sbjct: 238 FIVGVAGGLWGFVHLGSWEPAAFGIDRSFQLLFMVIIGGLGSIAGSFFGAAFIVLLPLLL 297 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ L + + + +++ H L RL Sbjct: 298 NYV--PHWLGLPLSTGTATHLEHMIFGALIVFFLIVEPHGLARL 339 >gi|299069701|emb|CBJ40977.1| putative ABC-type branched-chain amino acid transport system, permease component [Ralstonia solanacearum CMR15] Length = 322 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 120/307 (39%), Gaps = 24/307 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++G ++L+ + A ++ ++G G+LS + +GAY S L + Sbjct: 36 YTALGTRVLVLGLAAMSVNFLLGFTGVLSFGHAAYFGLGAYGAGFALKFLAPSTPLALVC 95 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ G G ++G S++ RG Y A+ T+ ++F I +W +T G G+ R+ Sbjct: 96 GTLLGGVAGALLGALSVRRRGVYFAMVTIAFGQVFYYIAFQWSALTGGDDGLRGFSRMP- 154 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + YY +L L+ ++ ++ R+ + IR+N++ Sbjct: 155 --------LDLGFTTLDILSNADAFYYFVLACLALATGLMAFILRSPFGHTLIAIRENER 206 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + AF +S F+G AGA +A + P +S++ + + ++GGM Sbjct: 207 RARFLGIPVNRHLWIAFTLSCFFMGFAGALYALLNNFADPRGLHYSQSGDFVMMAVMGGM 266 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S + + + + + + + + + ++L Sbjct: 267 RSFWGPLLGAVVFVVLQDYLSSL---------------TVNWMSFVGMLFVAIVLFFPRG 311 Query: 339 LLRLRTP 345 LL + Sbjct: 312 LLGVLRR 318 >gi|192292556|ref|YP_001993161.1| urea ABC transporter permease [Rhodopseudomonas palustris TIE-1] gi|192286305|gb|ACF02686.1| urea ABC transporter, permease protein UrtB [Rhodopseudomonas palustris TIE-1] Length = 537 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ L S +I+ ++ Sbjct: 258 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEAIRTRYPALFDYSLLIAVPLAFLVA 317 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + S Sbjct: 318 GAVGVLIER--TVIRFLYGRPLETLLATWGLSLILQQAVRTLFGPTNREVGNPSW-MSGA 374 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++L + A ++ LR T++ R + N++ S+ Sbjct: 375 FELGEMTITYNRLWILCFTLAVFALLLAMLRYTSLGLEMRAVTQNRRMAASMGIATSRVD 434 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 435 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 492 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + +++ + L I R L L+ + Sbjct: 493 GIANKFLEPVAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAVE 536 >gi|209546082|ref|YP_002277972.1| ABC transporter [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538939|gb|ACI58872.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 585 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 105/343 (30%), Gaps = 29/343 (8%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R + +++ LLA+ LL + G ++ ++ + +IY M A + ++ G G+ Sbjct: 1 MRDRQKLRLVLLLALALAALLLIVFGPMFLGRFSLNVLTRSMIYAMLAITVDLLWGYTGV 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L+ + +GAY+ ++ + G S L + ++ Sbjct: 61 LTFGQAAFFGVGAYATAMVLTHIGASPALFVVALVAAVLVPLVLGLAVGWLSFYHGSTPL 120 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + I++ + G + + + Sbjct: 121 YATVISLVVPIVVTQLVFSGGT---------------WTGSSSGLVGYDTLPLGLPGYFR 165 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + A + + R+ IRDN+ L K+ V + G+A Sbjct: 166 LSGACLLALAIVAIVFVRSDAGRLLVAIRDNEARVAYLGMNPARLKIVLTGVLAGVCGLA 225 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G +A + ++P+ F ++ LGG ++ + + G Sbjct: 226 GFLYANASGVVAPENTGFVFGTELVVWTALGGRGTIIGPMFGAIGIDYLSASLSG----- 280 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++ ++I++ L L T Sbjct: 281 ---------DLPFLWQLIVGALFVVMIILLPGGLASLVTRFLK 314 >gi|115525738|ref|YP_782649.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115519685|gb|ABJ07669.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 564 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 89/297 (29%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY ++ S L S +++ + Sbjct: 285 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFVVQETIRTSYPGLFDYSLLMAVPLAFLTA 344 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 +I + + +L W + + S Sbjct: 345 GLIGVLIER--SIIRFLYGRPLETLLATWGLSLILQQAVRTLFGPTNREVGNPSW-MSGA 401 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++L + ++ LR TA+ R + N++ S+ Sbjct: 402 FELGQLTITYNRLWILCFTLAVFVILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 461 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 462 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 519 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + M +++ + L I R L L+ + Sbjct: 520 GIANKFLEPMAGAVLAK-------------IAILVLIILFIQKRPRGLFALKGRAVE 563 >gi|207724971|ref|YP_002255368.1| transmembrane protein [Ralstonia solanacearum MolK2] gi|206590198|emb|CAQ37159.1| transmembrane protein [Ralstonia solanacearum MolK2] Length = 322 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 123/325 (37%), Gaps = 24/325 (7%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 +L + ++G ++L+ + A ++ ++G G+LS + +GAY Sbjct: 18 ALWAVLLVAPYWMPLLGGYTALGTRVLVLGLAAMSVNFLLGFTGVLSFGHAAYFGLGAYG 77 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 S L + ++ G G ++G S++ RG Y A+ T+ ++F I +W Sbjct: 78 AGFALKFLAPSTPLALVCGTLLGGIAGALLGALSVRRRGVYFAMVTIAFGQVFYYIAFQW 137 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G G+ R+ + + YY +L L+ ++ + Sbjct: 138 SSLTGGDDGLRGFSRMP---------LDLGFTTLDILSNADAFYYFVLACLALATGLMAF 188 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + R+ + IR+N++ L + AF +S F+G AGA +A + P Sbjct: 189 VLRSPFGHTLIAIRENERRARFLGIPVNRHIWIAFTLSCFFMGFAGALYALLNNFADPRG 248 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 +S++ + + ++GGM S + + + + + + Sbjct: 249 LHYSQSGDFVMMAVMGGMRSFWGPLLGAVVFVVLQDYLSSL---------------TVNW 293 Query: 321 TTLMVIALFLVILMRSHSLLRLRTP 345 + + + ++L LL + Sbjct: 294 MSFVGMLFVAIVLFFPRGLLGVLRR 318 >gi|163857891|ref|YP_001632189.1| branched-chain amino acid transport system, permease component [Bordetella petrii DSM 12804] gi|163261619|emb|CAP43921.1| branched-chain amino acid transport system, permease component [Bordetella petrii] Length = 350 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 117/306 (38%), Gaps = 18/306 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + ++++IY +FA L ++VG GL+SL + IGAY+ +L + + Sbjct: 25 DYYTGLAVKLMIYAIFALSLQLLVGGAGLVSLGHAAYFGIGAYAAALLSPESEAAGLAWL 84 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +A++ A ++ I + + + G GIY+ R Sbjct: 85 LGAAVLGAAAYALVTGALALRTRGVYFIMVTLAFSQMAYYVFHDTDLGGGSDGIYLYFRP 144 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + Y +L L+ + L R+ A IR N Sbjct: 145 ---------QLSLGGWQPFDLDQPGVYYLFVLACLALTWGFLAMLARSPFGAALAGIRIN 195 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + KL+A+ V +A G+AG +A ++P++ + ++ +V+ +VILG Sbjct: 196 EQRMRAAGYSTFPYKLAAYVVGAALAGLAGFLYALKDGFVTPELLAWEQSGLVLLMVILG 255 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM L A LI + EL + + +++ ++ + Sbjct: 256 GMGRLGGAVLGAAALILLQELFQS---------QAIFGDYAQHWHLPLGLSIIALVALLP 306 Query: 337 HSLLRL 342 L L Sbjct: 307 DGLAGL 312 >gi|288921964|ref|ZP_06416174.1| inner-membrane translocator [Frankia sp. EUN1f] gi|288346674|gb|EFC80993.1| inner-membrane translocator [Frankia sp. EUN1f] Length = 371 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 121/315 (38%), Gaps = 16/315 (5%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 +S Y + + + + GL+++ G G +SL + IGAY+ I Sbjct: 30 PQQSTPYDNLQITLVAAWAVVIAGLNLLTGYAGQISLGQAAFFGIGAYTTAITALHGWP- 88 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + L ++ ++ G ++ +P+++ RG LA+ T+ + + + + +T G G+ Sbjct: 89 VVLSFALAFLLPATVGALVAIPAVRLRGHALAMITISLPLVAVPLAKRLDGLTGGSQGLT 148 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 S + + + YYV+L + ++ R A Sbjct: 149 TPIGSAPTW--------------SGLADDQWAYYVVLTVAAALLALAHVAVRGRTGRALS 194 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IR ++ A + + K+ FA++S + G G + +SP+ F I ++ Sbjct: 195 LIRTSEVAAVTTGIPVRRYKMVVFALASGYGGAGGFLYVYCVRFVSPESLDFLLGITLLC 254 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +++GG+ S + A + V L +N +SL+ + IA Sbjct: 255 SLVVGGLRSSAGSVVAACFYVYVPNLVGDINPEK-SSLIYGAVLLLVLLFAPAGIAGAAR 313 Query: 332 ILMRSHSLLRLRTPS 346 L R LL + + Sbjct: 314 GLWRRRKLLARKLAT 328 >gi|332710880|ref|ZP_08430817.1| urea ABC transporter membrane protein [Lyngbya majuscula 3L] gi|332350433|gb|EGJ30036.1| urea ABC transporter membrane protein [Lyngbya majuscula 3L] Length = 388 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 105/352 (29%), Gaps = 34/352 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + I+ ++A+V L+F L + + + L + A G+ ++ G GLL Sbjct: 12 KQRRRKLIIEIVAIVAIALVFALLMPVILPDFRLKLLGRFLSLSIVAIGIDLIWGYTGLL 71 Query: 67 SLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMISGACGMI 109 SL I +A+G Y++ + G + W A +I Sbjct: 72 SLGHGIFFALGGYAFAMHLKLQLPEGEIPEFFTLYGVKELPFFWQPFYSFPFTLIAIVLI 131 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + + + + + L Sbjct: 132 PSIVAGLLGYLVFRNRIKGVYFSILTQAALLVLFNFFNGQQKLINGTNGLK---TDTETL 188 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 F S ++ Y + + L + WL IRD++ Sbjct: 189 FGMLVSSKQAQLAFYEISILCVVLIYLLCRWLTSGRFGRLLIAIRDDENRVRFSGYDPTG 248 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 K+ FAVS G+AGA + ++P + + +I ++ V +GG +L T Sbjct: 249 FKVLVFAVSGGIAGVAGALYTVQSGIVTPSYMEVAFSIEMVIWVAVGGRGTLIGAILGTL 308 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ L F +V+ + + ++ Sbjct: 309 LVRLGQTLLSE--------------QFPEVWLFFQGALFLIVVTVLPNGIVG 346 >gi|218531732|ref|YP_002422548.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4] gi|218524035|gb|ACK84620.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4] Length = 347 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 127/315 (40%), Gaps = 16/315 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88 + T + + +++ I LI + GL++ +G G SL A+GAY+ +L Sbjct: 38 IPLTATDYWYNAILIPFLIMALAGLGLNLTMGYAGQASLGTGAFMAVGAYATYNLLLRLP 97 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L + + + +I+GA G+++GLPSL+ +G YL TL + + + + +N + Sbjct: 98 ELPLPVSLAGGGLIAGAVGLVVGLPSLRIKGFYLIAPTLAAQFLIEWVFNQVGWFSNYAS 157 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 ++ + Y + L + + L + Sbjct: 158 SSAISTPRLVFLGY-------------DLSSPAGRYALTLTSVIVVTVLAWRLVGSQTGR 204 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENI 267 WR +RD + A + + AKLSAF V +A G+AGA +A A + F + Sbjct: 205 NWRAVRDGETAAAVIGVPVARAKLSAFFVGAAVSGVAGALWAFAYLGTVDARSFDLDRSF 264 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + I+I+GG++SLS A ++ L ++ + L + L Sbjct: 265 QAMFIIIIGGLSSLSGSFIGAAFIVLTPILLTHLSNAFLGGSLD-GGQLSNLQRILFGAL 323 Query: 328 LFLVILMRSHSLLRL 342 + ++ + L L Sbjct: 324 IIGFLIKEPNGLAAL 338 >gi|317405905|gb|EFV86187.1| branched-chain amino acid transport system [Achromobacter xylosoxidans C54] Length = 314 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 73/311 (23%), Positives = 135/311 (43%), Gaps = 20/311 (6%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYGLS 91 Y + ++I+IY +FA L ++VG GL+SL + IGAY+ +L S S Sbjct: 20 WSGSDYYTGLAVKIMIYAVFALSLQLLVGGAGLVSLGHAAFFGIGAYAAALLSPSSEAAS 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 +W L+P + + + A + G +L+ RG Y + TL +++ + + G GIY Sbjct: 80 LWWLLPAALLAAAAYAALTGALALRTRGVYFIMVTLAFAQMAYYVFHD-TKVGGGSDGIY 138 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + R + + Y+ +L L+ + LRR+ A Sbjct: 139 LYFRP---------RAEIGGWLPFDLDQGNAYYFFVLACLALTWGFLALLRRSPFGAALA 189 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IR N++ + + KL+A+ + +A G+AG FA ++P++ + ++ +V+ Sbjct: 190 GIRINEQRMRAAGYSTYPYKLAAYVIGAALAGLAGFLFALKDGFVTPELLAWEQSGLVLL 249 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +VILGGM SL TA L+ + EL + + + +A+ + Sbjct: 250 MVILGGMGSLGGAVLGTATLVLLQELFQSQALFG---------DYARHWHLPLGLAIIAL 300 Query: 332 ILMRSHSLLRL 342 + + L L Sbjct: 301 VALLPDGLAGL 311 >gi|33603543|ref|NP_891103.1| putative branched-chain amino acid transport system permease protein [Bordetella bronchiseptica RB50] gi|33577667|emb|CAE34932.1| putative branched-chain amino acid transport system permease protein [Bordetella bronchiseptica RB50] Length = 309 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 118/284 (41%), Gaps = 16/284 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 L+ + L A + +I +G++ Y + GL++ G G +SL + + AY Sbjct: 9 ALCALVLIALPALLNDPFITHLGVRAATYAIVVMGLTLFAGYTGQISLGHAAFFGLAAYL 68 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 ++ + + +PV+ G G ++G+ L+ G YLA+A++ ++ I Q I+ Sbjct: 69 SGMMAKAGVPYL-VSVPVATAAVGVLGCLVGMLVLRTSGHYLALASIAVAVIVQVIIKNS 127 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 IT G +G+ F G ++ S + YY +L F I+ Sbjct: 128 T-ITGGPSGLTAVPAPDFFGWSLTSD--------------LGYYYYVLLCMFAGFVILRR 172 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + +A + I +N+ A SL + K+ +F +S+ F AG F I PD Sbjct: 173 VIDSRTGDALQAIANNELAAQSLGIPVFRYKVLSFTISTLFAAFAGTLFVHYDGFIDPDR 232 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 +++ + + +GG+ ++ L + E Y Sbjct: 233 LGIHVSVLFLIMTFVGGIGNIYGSVIGAFALTIIEEYAQEFGQY 276 >gi|326315518|ref|YP_004233190.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372354|gb|ADX44623.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 354 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 23/344 (6%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 +++F + +++ + L + S + ++ + LI + A GL+I+V Sbjct: 17 LALFPIAQDRWALLALLAVAFVGV------PLVGSDYFFRAVAVPFLILSLAAIGLNILV 70 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG-MIMGLPSLKFRG 119 G G +SL A+GAY+ L R LL + + ++ G+PSL+ RG Sbjct: 71 GYCGQISLGTGAFMAVGAYAAYNLQVRIEGMPLLLALLGGGLCATVFGVLFGIPSLRIRG 130 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 YLA+ATL + K +TN ++ + + + Sbjct: 131 LYLAVATLAAQFFTDWFTNRVKWVTN-------------DSSSGSVSVGHLQILGFGIET 177 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + Y + LG + A + L R A+ W +RD A + ++AKLSAFAVSS Sbjct: 178 PVQKYLLCLGFVAVFALLAKNLVRGAVGREWMAMRDMDVAAAVIGIRPVYAKLSAFAVSS 237 Query: 240 AFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 +G+AG + P F + ++ +VI+GG+ S++ A ++ + L Sbjct: 238 FIVGVAGGLWGFVHLGSWEPAAFGIDRSFQLLFMVIIGGLGSIAGSFFGAAFIVLLPLLL 297 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ L + + + +++ H L RL Sbjct: 298 NYV--PHWLGLPLSTGTATHLEHMIFGALIVFFLIVEPHGLARL 339 >gi|94986941|ref|YP_594874.1| branched chain amino acid ABC transporter, permease protein [Lawsonia intracellularis PHE/MN1-00] gi|94731190|emb|CAJ54552.1| branched chain amino acid ABC transporter, permease protein [Lawsonia intracellularis PHE/MN1-00] Length = 347 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 114/333 (34%), Gaps = 7/333 (2%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + + ++LFL + Y + I I + A L++V G G+ SL Sbjct: 8 YIFNVLTIGVIVLFLLWAESTFNGYQIQLLNLIAINTILALSLNLVYGFTGMFSLGHAGF 67 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 AIGAY +L + I + ++ L A + Sbjct: 68 MAIGAYISALLILPAEQKEIMWILEPII--WPFSVLETPFWFSILAGGLVSAFFGLLIAL 125 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + + G R+ + + Y L Sbjct: 126 SVLRLGGDYLAIATLGFSEIIRVILINVASITNGSLGIKGIPSHTDLFVTYGWLFL---- 181 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++ L ++ N +++IRDN+ A + + K +F + + F G+ GA Sbjct: 182 TLFFLIKLLQSNFGNIFKSIRDNEIAAKVMGINTLHYKTLSFTIGAFFAGIGGALLGNLL 241 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I P MF F ++ IV+ GG+ S++ + I+ ++E + + + Sbjct: 242 TTIDPKMFTFLLTFNILMIVVAGGLGSITGSILGSIIITILLEWLRAVESPFNFGSYQIP 301 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + L +IL R ++ ++ S Sbjct: 302 -GIPGMRMVIFSLILLGIILYRREGIMGMKEIS 333 >gi|330822010|ref|YP_004350872.1| inner-membrane translocator [Burkholderia gladioli BSR3] gi|327374005|gb|AEA65360.1| inner-membrane translocator [Burkholderia gladioli BSR3] Length = 353 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 110/295 (37%), Gaps = 9/295 (3%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L A S+ ++L+Y + A G ++++G GLLS I + +G+Y+ I+ Sbjct: 42 LAIAVACALPLALNSGSLATEVLVYALAALGCNLLLGYTGLLSFGQGIFFGLGSYTVGIV 101 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 +R+ L + L + + I ++G S++ RG Y + TL ++F + +T Sbjct: 102 LTRFALPLPLALAAAVAIGALAAAVVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTPELT 161 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G+ R + + Y + + + ++ + + Sbjct: 162 GGDNGLLDIPRPA---------LSIAGHALLPLATPWQFYGFVAVLFVAAFWLLRRVTLS 212 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 IRDN+ ++ + KL AF +S A G+AGA A + Sbjct: 213 VFGRTLLAIRDNEARAAAVGYDVPRFKLLAFVLSGAVTGLAGALHALMTGIAPLSNIDYH 272 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + +++ ++GG L + + + + L + ++ Sbjct: 273 TSEMILVTTVIGGTGKLFASVLGAVFYVLFSDWLSTLWPRWLLLLGLVLIAVSLF 327 >gi|295696195|ref|YP_003589433.1| inner-membrane translocator [Bacillus tusciae DSM 2912] gi|295411797|gb|ADG06289.1| inner-membrane translocator [Bacillus tusciae DSM 2912] Length = 345 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 15/292 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + + L + Y+ S+ I + + + A GLS+ +G G +SL Y IGAY Sbjct: 17 AIVTVGIVLAVIPFAFGPYVLSVLIAVGLSSIVAVGLSLFIGYAGQISLGHAGFYGIGAY 76 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + IL R W I + I+G ++ P+L+ G YLA+ATL + I I+I+ Sbjct: 77 TSAILALRGVD-GWATILIGMAITGGVAWLVSRPTLRLEGHYLAMATLGLGMILNIIMIQ 135 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T G +G+ L + + +YY++ M L Sbjct: 136 WTSVTGGPSGLTGIPPLTVGSFVFDADWK--------------LYYLIWVMALLVIWGFR 181 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + + A + + +++ A SL K AF +S+ +AG+ +A +SP Sbjct: 182 NLVHSRVGRALKALAESEAAASSLGVPTARFKEMAFILSAMAASLAGSLYAFYLSFVSPS 241 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 F +I + + I GG+ S+ A++ + + + F S Sbjct: 242 TFDAIASIEFLIMAIAGGVRSVWGAPVGAAVVTILSQAMKSVVPALFPSAGG 293 >gi|158523021|ref|YP_001530891.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3] gi|158511847|gb|ABW68814.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3] Length = 370 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 73/342 (21%), Positives = 140/342 (40%), Gaps = 24/342 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + + + L F FL + Y + I I ++ GL+++VG G +S Sbjct: 31 FSSGAVVFWFVVLGCFLAAFPFLCKHYNYNYYIYVANYIAIQIIVVVGLNMLVGFTGQIS 90 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L YA+GAY + L + L + ++A+I+G G ++GLP+L+ G YLAIATL Sbjct: 91 LGHAGFYAVGAYGTITLMTEAHLPFLAALVLAALIAGLLGFLLGLPALRLEGPYLAIATL 150 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ K + + G+ G+ D + F Y++ Sbjct: 151 GFGLTITQVIGKIELL-GGRQGLNAPDLVVFGRELKTDQD---------------FYFLA 194 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + L + +T + A+ IRD A ++ ++F K AFAVS+ + G+AG Sbjct: 195 VPIAVLLVLFARNVIKTKVGRAFIAIRDADIAAETMGINLVFYKTLAFAVSAFYAGIAGG 254 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A I P++F +I+ +++ ++GG+ S+ +L V + + Sbjct: 255 LYAFVLGFIDPELFSLFLSIMFLTMAVVGGLGSIMGPIAGALVLGWVDLELRNILSIPYL 314 Query: 308 SLLKFDCS--------FNMRHTTLMVIALFLVILMRSHSLLR 341 S + + + L ++L + Sbjct: 315 GDWLRSLSSSYFSLTGVSNIQFIVFGVILVSIMLFEPLGIYG 356 >gi|294341741|emb|CAZ90166.1| putative Urea ABC transporter, permease protein UrtB precursor [Thiomonas sp. 3As] Length = 550 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 90/291 (30%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + G +G++++ IGAY+ ++ S + + + + + + ++ Sbjct: 276 VTYGLMGVINMAQGEFIMIGAYATYVMQSLFQHYLPGYVHYALIAAVPFSFVVAGGIGML 335 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L W + + + + + Sbjct: 336 IER--TIIRRLYGRPLETLLATWGISLVLIQAVRSLFGPQNVQVDNPPWMSGGFNLMANL 393 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I ++ + + L + RT + R + N+ + I + AF + Sbjct: 394 ILPYNRMVIIAFTVVVLLGMWLLISRTRLGLFVRAVTQNRPMASCVGVRIARVDMLAFGL 453 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+AG A S+ + +V+LGG+ L+ A L L Sbjct: 454 GTGIAGLAGC--ALSQIGNVSPEMGTGYIVDCFMVVVLGGVGQLTGTVAAAMSLGVANTL 511 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 G+ +++A+ L I R + L+ S Sbjct: 512 LEGVAGAVLAK-------------IAVLVAIILFIQKRPQGMFALKGRSVE 549 >gi|83950239|ref|ZP_00958972.1| ABC transporter permease protein [Roseovarius nubinhibens ISM] gi|83838138|gb|EAP77434.1| ABC transporter permease protein [Roseovarius nubinhibens ISM] Length = 329 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 109/315 (34%), Gaps = 29/315 (9%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + Y+ +G +IL Y + A L +++G ++S GAY+ +L Sbjct: 34 PVFAWATNDPYLVVIGTRILAYAIAAMALDLILGYGAMVSFGHAAYLGFGAYAVAVLSRH 93 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 I L + +S +I G SL+ RG Y + TL ++ + Sbjct: 94 GVTDITLHLLAGISLSAVFALITGWISLRTRGIYFIMITLAFGQMAYFFFVSLSSYGG-- 151 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 V R ++ + +YY L + ++ + + Sbjct: 152 ------------DDGVTLDARSTVLGQPWLENDQVLYYTALALLIGLFTLCARIVTSRFG 199 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 R+N +L +L+AF +S+ +AG A + ISP + + Sbjct: 200 RVLTGTRENTTRIEALGFAPFRYQLTAFVISACMTSVAGVMLANQAEFISPAFMSWHVSG 259 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 +I +V+LGG+ +L+ + + + EL ++ + Sbjct: 260 ELIVMVVLGGIGNLTGAIGGAFLALMLEELLNIFTEHW---------------KLFFGVI 304 Query: 328 LFLVILMRSHSLLRL 342 L LV+L + L Sbjct: 305 LVLVVLYSPDGISGL 319 >gi|292654119|ref|YP_003534017.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] gi|291369483|gb|ADE01711.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] Length = 358 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 131/338 (38%), Gaps = 23/338 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 L K + LLA + ++ G + + I +IY A +I+ G G Sbjct: 21 PLVKGVGLFGLLAALPTIIEIDVAGMELAALLSLKVLILTVIYAYTAQAWNIMSGYTGQF 80 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS--LKFRGDYLAI 124 S + +GAY+ L + ++ W+ + V +I+ G+++G S +G Y A+ Sbjct: 81 SFGHAAFFGVGAYATQALVVDFAVNPWVGMLVGGVIAAGYGLVIGALSFRFNLQGHYFAL 140 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 ATL +E+ + ++ + + R + + ++ Y Sbjct: 141 ATLAFAELLRFVVTNMSELRGANG---------YFKPFPRDYGAEYGLVAFQFQNDLPYY 191 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y+++G + + ++ + + + IR++++A S+ KL AVS+ F + Sbjct: 192 YLIVGFLLVVTLVSWVIKNSWVGLYFFAIREDERAAASVGVPSFRYKLIGVAVSAFFTAL 251 Query: 245 AGAFFAASRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 GA+++ + I +F +N+ ++ ++GG +L + I+ V E+ Sbjct: 252 GGAYWSMYFNTIRPDTVFALFKNVELLLPAVVGGPGTLLGPIVGSFIVTPVSEIARTTF- 310 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 N + L +++ ++ Sbjct: 311 ----------SDINGLDRIIYGAFLVAIVIYSPRGVVS 338 >gi|254454873|ref|ZP_05068310.1| inner-membrane translocator [Octadecabacter antarcticus 238] gi|198269279|gb|EDY93549.1| inner-membrane translocator [Octadecabacter antarcticus 238] Length = 397 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 136/358 (37%), Gaps = 29/358 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 I+ L ++ P LL F + ++ + + +I+ +FA G +++ G G LS Sbjct: 12 MLIVFGLVMLAPFLLNPFPEGSAMAQFNAGYPDLMQRFVIFGIFAVGFNLLFGLTGYLSF 71 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 IG+Y+ + L++ I V+ +++GA +++G SL+ G Y +I TL Sbjct: 72 GHAAFLGIGSYAAIWSMKLVTLNVIPGILVAIVVAGAFALVVGFVSLRRSGIYFSILTLA 131 Query: 129 M-SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM---- 183 +F PIT G+ G+ + + L + I + + + Sbjct: 132 FAQMMFAMAYSVLTPITGGETGLQIKNTDTPLFGGPETGIGRANLFGAEMGNSYELTLGN 191 Query: 184 --------YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 YY+ L+ + + + R+ R ++ NQ+ T LSAF Sbjct: 192 HLFTFNLGYYIAGFFLLLAFYLSIRIFRSPFGIMLRAVKSNQQRMNYTGLTPKRYTLSAF 251 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S + G+AG A ++ P+ ++ + V+ + ILGG +L ++ + Sbjct: 252 VISGMYAGLAGGLMVAMDTQVGPERMFWTASGEVVIMTILGGAGTLLGPVLGAGMIKYME 311 Query: 296 ELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSHSLL 340 + +N + F M I LV++ L+ Sbjct: 312 NIISKINKDILHEWFAFLPDGLEDVIVSMVYPFIGKGWHLTMGILFMLVVIFLPGGLV 369 >gi|332799564|ref|YP_004461063.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp. Re1] gi|332697299|gb|AEE91756.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter sp. Re1] Length = 354 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 77/356 (21%), Positives = 137/356 (38%), Gaps = 45/356 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 KY + ++ +FL T Y+ + I + A L++ G GL SL Sbjct: 7 KYRNAILTTVLIAAFFIFLSWTKTHLDAYVMRIFNLCAINSILALSLNLTNGFTGLFSLG 66 Query: 70 CVIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGACGMIM 110 AIGAY+ +L + + + ++ ++S G ++ Sbjct: 67 TAGFMAIGAYTSALLTMPPGIKTMNFFMQPINPMLLNINVHFFFALLIAGILSALVGFLI 126 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 G P LK +GDYLAIATL EI + + ITNG G+ + Sbjct: 127 GAPVLKLKGDYLAIATLGFGEIISVVFTNTQTITNGALGLKGIPQYTDQ----------- 175 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 Y G+ + + L ++ A++ IR+++ A ++ + Sbjct: 176 --------------YWSWGVAIVIILGLKSLVNSSYGRAFKAIREDEIAAQAMGINLFNH 221 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 K +F +S+ G+ GA A I P MF+F ++ +V+LGGM S++ + I Sbjct: 222 KTLSFTISAFIAGIGGALLANLNSTIDPTMFRFFFTYQILLMVVLGGMGSITGSVISACI 281 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + ++EL + + + + I L LV+L H ++ S Sbjct: 282 ITVLMELLRVVESPMDLGFISLP-GISGMRMVVFAILLILVVLFLRHGIMGENEIS 336 >gi|300088538|ref|YP_003759060.1| inner-membrane translocator [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528271|gb|ADJ26739.1| inner-membrane translocator [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 310 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 117/303 (38%), Gaps = 21/303 (6%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y + + I I+ + A L+ G GL + V + IGAYSY IL + L + Sbjct: 7 YALNALVYIGIFAIVAKSLNAEYGYTGLANFGKVAFFMIGAYSYAILIDVGVIWP-LALV 65 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ IS G+++ LP+++ R DYLAI TL EI + + NG GI + Sbjct: 66 LAGAISSLFGLLISLPAIRLREDYLAIVTLTFGEILRIFFKAEDWLANGVWGINIPSVFA 125 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 F + ++ G+ L + +L + R +RD++ Sbjct: 126 ---------------ADDFALRLWLNLALVAGVLLLCYLFMHYLTNSPFGRIMRALRDDE 170 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A ++ I K F + SA G+ GA FA I+PD F + +V+LGG Sbjct: 171 VAADAIGKNRIKYKSIVFMIGSAMAGLGGALFANFLGYITPDSFLPIITFTIWMMVMLGG 230 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 S + A + + Y + + + + L+++ R Sbjct: 231 PASNVGVIVGAAAVQLFERGTIILKDY-----ITLPIDPTNLQNIMFGVIIILILMYRPG 285 Query: 338 SLL 340 L Sbjct: 286 GLF 288 >gi|126734292|ref|ZP_01750039.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. CCS2] gi|126717158|gb|EBA14022.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. CCS2] Length = 358 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 21/344 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F L+L++ + + + +L + + + S+ + LIY + A GL+I+ G Sbjct: 20 FPLKLDRIGFWVTMA------VAWLVIPFVINDYWASSLLVPFLIYAIAAIGLNILTGYC 73 Query: 64 GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G +SL A+GAY+ ++ S ++I + I ++ I+ G GLPSL+ +G YL Sbjct: 74 GQVSLGTGGFMAVGAYACYKLMTSFPDVNIMIHIVLAGGITAMVGAAFGLPSLRIKGFYL 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ATL + K N A ++ + + Sbjct: 134 AVATLAAQFFLVWLFNKVSWFYNYSASGQISAP---------ERLVAGVAVTGPSTPAWA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 Y + L + A I L R + +W IRD A + + AKL+AFAVSS F+ Sbjct: 185 QYLICLFFVTVCAIIARNLTRGTLGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244 Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA F A + F ++ +V+ ++I+GG+ S+ A L+ + Sbjct: 245 GIAGALFFAVYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVALKW 304 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + F ++ + ++ H L +L Sbjct: 305 IGVDVMGWPTDLVAHF---QLVIVGALIMFFLIKEPHGLAQLWR 345 >gi|254502963|ref|ZP_05115114.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222439034|gb|EEE45713.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 326 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 116/315 (36%), Gaps = 22/315 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------LGSRY 88 Y+ I + GL++ G+ GL + V ++ GAY +I + Sbjct: 6 SYLVFFSTVAAILAIAVLGLNLQWGNTGLFNGGVVASFGAGAYGTLILGGTPQDGHLGGF 65 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L L + + +G ++G +L+ R DYLAIAT ++ F+N++ +T G Sbjct: 66 DLFYPLALLGGMIFAGVLAWVVGKLTLRLRHDYLAIATFGVAVAFENVMRNATAVTGGAQ 125 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 GI +R S Y + +L L + L + Sbjct: 126 GIRGFERP------------LQSLIGSGFTYNLVFLIAVLICLVLVYVFLERLTVSPFGR 173 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 R IR+++ A SL + +L+AF S IG+AG+ + +SP Sbjct: 174 LLRAIREDETAARSLGKSPDKVRLAAFVTGSVIIGLAGSLYGTFYAFVSPQDVLPILTFQ 233 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 + +++I+GG + ++ G + ++ L+ + + Sbjct: 234 IWAMLIVGGAGNNKGAMAGAFLIWGSWTFSGWALSRFAP--VEVQLYTGSIQFVLIGMVI 291 Query: 329 FLVILMRSHSLLRLR 343 ++L R L R Sbjct: 292 VGMLLWRPQGLFPER 306 >gi|154250146|ref|YP_001410971.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1] gi|154154082|gb|ABS61314.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1] Length = 353 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 114/343 (33%), Gaps = 9/343 (2%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ + + V ++ L + K Y + + IY + A L++V G G+ Sbjct: 1 MKSKAKRDLTLTVLFVIFAIILLQIANVKFDTYKKQILSLMAIYGIMAVSLNLVNGITGV 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 SL +GAY+ +L + I S + L A Sbjct: 61 FSLGHAGFILLGAYTSALLTIPPEQKAMIFIIAPP--SPFIVNLHTDFLTATIIGGLVAA 118 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 F + + + G R+ L + + + Sbjct: 119 FGAFIIGFPVLRLSGDYLAIASLGFSEVLRILALNLQSIT----NGSLGLKGLPNYTNIW 174 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 G F++ I+ L +++ A IRDN A ++ + L +F VS+ F G++ Sbjct: 175 WSWGWLFVTILFIVSLVKSSYGRALLAIRDNSIAAEAMGINVFKHTLLSFVVSAFFAGVS 234 Query: 246 GAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 GA +A I P F V+ +V+LGG+ S+S I ++E Sbjct: 235 GALYAHWLTTIDPRITTFGPILTYYVLIMVVLGGLGSISGSVIGAIIFAFLMEWLRAFEQ 294 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + F + ++ + + +++ + + Sbjct: 295 PFTLFGKDFP-AIQGMRMLVLSVLFVVTMIVWKRGIFGRAEIT 336 >gi|328542036|ref|YP_004302145.1| amino acid or sugar ABC transporter, permease [polymorphum gilvum SL003B-26A1] gi|326411786|gb|ADZ68849.1| Amino acid or sugar ABC transport system, permease protein [Polymorphum gilvum SL003B-26A1] Length = 543 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 107/305 (35%), Gaps = 34/305 (11%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMIS 103 A GL+I G +G++++ IGAY ++ + S+ + +P++ +++ Sbjct: 264 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFVVQEVIRGSAPGLFDYSLLIALPLAFLVA 323 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 GA G+ + ++F L+ + IL + G V + + G Sbjct: 324 GAVGIGIERGIIRFLYGRPLET-LLATWGLSLILQQAVRSLFGPTNREVGNPSFMSGA-- 380 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 F + ++++ + A +IL L++T+ + R + N++ S+ Sbjct: 381 --------FDIGQLTITYNRMWIVVFALVVFAGLILVLKKTSFGLSMRAVTQNRRMAASM 432 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + F + S G+AG A S+ I +V+ GG+ +L Sbjct: 433 GIRTPWIDAFTFGLGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWG 490 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 L V + L+++ + L I R L L+ Sbjct: 491 TLVGAITLGVVNKFLEPYAGAVLGK-------------ILVLVFIILFIQKRPRGLFALK 537 Query: 344 TPSNF 348 + Sbjct: 538 GRAVE 542 >gi|229190059|ref|ZP_04317065.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus ATCC 10876] gi|228593388|gb|EEK51201.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus ATCC 10876] Length = 333 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 128/334 (38%), Gaps = 31/334 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + + I + ++S I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + Sbjct: 135 EKWRGLTHGGDGFTFGVPEIFRDRF-------------------TFYYVSLVCLCFIFIL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + I+ + + Y Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLIGAIAGSGIIESLKYYLSELATEY---------PIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R T ++ + +V+L+ L+ +R Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKKLKSFKR 320 >gi|226364273|ref|YP_002782055.1| ABC transporter ATP-binding protein [Rhodococcus opacus B4] gi|226242762|dbj|BAH53110.1| putative ABC transporter ATP-binding protein [Rhodococcus opacus B4] Length = 845 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 64/322 (19%), Positives = 115/322 (35%), Gaps = 34/322 (10%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 LL L A Y +Y + +S++ G G+ S+ AIGAY+ Sbjct: 29 AAALLTIAVLSAGLVPGYQVYTVGLAAVYGLIVLSISLLAGWTGIWSIGHPAMVAIGAYA 88 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 S S + + + + G +G +F Y+A+ TL + + I+ W Sbjct: 89 TAYGSSHGWGSAFTSVV-AVALCAMLGGFLGFAGSRFSVLYVALLTLAFTLVTLEIIGAW 147 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 K +T G G+ V V + Y+ +G+ L+ ++ ++ Sbjct: 148 KSVTGGDQGVPVDAF------------------GDLVPSSDDVTYLAVGVLGLAITVSVF 189 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +RRT I + + A S+ FA+S+ G+AG A ISP+ Sbjct: 190 MRRTTIRMRMVAAKTHPLAGRSIGIAPELQSSLGFAISAGVAGLAGVLLALLSGFISPEG 249 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + +I+ +LGG S+ A L L + ++ Sbjct: 250 FSMVFAVNLIAATVLGGTGSVIGAVLGGAFLASAPTLSSSL---------------SIDQ 294 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 L+ L L +L + ++ Sbjct: 295 PYLIGGVLILTLLFLADGIVPT 316 >gi|332527106|ref|ZP_08403185.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] gi|332111536|gb|EGJ11518.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] Length = 354 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 79/344 (22%), Positives = 139/344 (40%), Gaps = 23/344 (6%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 + +F +R ++ L L + + + ++ I LI + A GL+I+V Sbjct: 17 LQVFPIRQDRVAIALLLAL------AIVVVPLVAPEYLFRAILIPFLILSLAALGLNILV 70 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRG 119 G G +SL A+GAY+ R + I + + S A G++ GLPSL+ +G Sbjct: 71 GYCGQISLGTGAFMAVGAYAAYNFQVRIDGMPVVASILLGGLCSTAVGVLFGLPSLRIKG 130 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 YLA+ATL ++ K +TNG V+ F + Sbjct: 131 LYLAVATLAAQFFVDWAALRLKFVTNGSTSGSVSVAELQ-------------FLGIPIES 177 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + Y L + A++ L R I W IRD A + ++AKLSAFAVSS Sbjct: 178 PVQKYLFCLAFVLVFATLAKNLVRGHIGREWMAIRDMDVAAAVIGIRPVYAKLSAFAVSS 237 Query: 240 AFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 +G+AGA + P F + + ++ ++I+GG+ S+ A ++ + Sbjct: 238 FIVGVAGALWGFVHLGSWEPAAFGVNRSFDLLFMIIIGGLGSIMGSFFGAAFIVVLPIAL 297 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + Y+ + + + +++ H + RL Sbjct: 298 DSL--PYWFGIPIDTALAAHLTFMIFGALIVFFLIVEPHGIARL 339 >gi|299132188|ref|ZP_07025383.1| ABC transporter related protein [Afipia sp. 1NLS2] gi|298592325|gb|EFI52525.1| ABC transporter related protein [Afipia sp. 1NLS2] Length = 622 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 120/334 (35%), Gaps = 26/334 (7%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K L L++ F+ + + +IL++ +F G I+ G GLLS Sbjct: 3 KQRPFLIETLTAIGLIIAPFILPHLG--FAPNTVNRILVWGLFGIGFDILFGFTGLLSFG 60 Query: 70 CVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 Y G + +L + + + + + A G ++GL +L+ G Y A+ T+ Sbjct: 61 QSALYGTGGFVAAYLLTIAGFPHVITALFIGMVAAAAVGYLVGLVALRSTGIYFAMITVA 120 Query: 129 MSEIFQNI-LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++E+F + T G+ G+ + +Y L Sbjct: 121 IAEVFFFVEFNPLSDWTGGENGLPGVPSPSLDLGFIHMHF----------TTGWSLYGFL 170 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 F+ + L + R+ + R IRDN ++ + KL+AF V++A+ G AG Sbjct: 171 AFWFFIGIVLGLRIVRSPVGAVLRAIRDNPLRAAAVGHNVHGYKLTAFVVAAAYAGFAGG 230 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + PD F F + ++ + +GG +L + + + + Sbjct: 231 LLGVMQAFMPPDAFMFDTSAQLVMMTAIGGTGTLFGPLLGATVWLFLQDFLQA------- 283 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + L++ L+ Sbjct: 284 -----ALGLGAAWKLVLGVIFVLLVCFLRRGLIG 312 >gi|312880169|ref|ZP_07739969.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] gi|310783460|gb|EFQ23858.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] Length = 294 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 74/307 (24%), Positives = 133/307 (43%), Gaps = 31/307 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y S+ I+I + A GL+++VG G +SL + IGAY+ +L + LS W Sbjct: 2 NEYTLSVATLIVIQAIAASGLNVIVGYAGQISLGHAAFFGIGAYTCALLTTSGNLSFWGA 61 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +PV +++ G+++GLPSL+ + D+LAI T+ ++ I + + + + P G GI R Sbjct: 62 LPVVLLVAAGVGVLLGLPSLRLKEDFLAITTIGINFIVEALFL-YTPFFGGALGIGGIPR 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + + L L+ + R A IR+ Sbjct: 121 V---------------VLFGIKLKGLGFLLLCLAFLALALLLCWAFTRCWSGLACFAIRE 165 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A S+ + + KL AF + + + GA +A IS F F +++++S+V+L Sbjct: 166 DETAAASMGISPVRFKLLAFVLGTVLAALGGALYAHFMRFISAGDFSFPVSVMLLSMVVL 225 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM +L +L + E+ + Y L L L+I + Sbjct: 226 GGMGTLWGPLVGAVVLGVLPEVFRPLTDY---------------RMFLYAALLLLMIRFQ 270 Query: 336 SHSLLRL 342 LL Sbjct: 271 PGGLLGE 277 >gi|304393396|ref|ZP_07375324.1| inner-membrane translocator [Ahrensia sp. R2A130] gi|303294403|gb|EFL88775.1| inner-membrane translocator [Ahrensia sp. R2A130] Length = 359 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 74/328 (22%), Positives = 135/328 (41%), Gaps = 13/328 (3%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + + + + + +++S+ I LI+ + GL+I+ G G LSL + Sbjct: 27 VGLAIIIFVAAVVIPVFGNDLFLNSIMIPFLIFTLATIGLNILTGYCGQLSLGTGAFMGV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAYS + +SI + I +S + A G++ GLPSL+ +G YLAI TL + Sbjct: 87 GAYSCYKLATIFPEVSILIHILLSGFFAAAVGVVFGLPSLRIKGLYLAITTLAAQFFLEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ + N + + L F + + Y ++LG+ + Sbjct: 147 AFVRVAWLYNYNDSGAIQNVPQKL---------FGIQITGAAAEPVTRYMLVLGIVIMFT 197 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + + R I +W IRD A + + AKLSAFA+SS G++GA Sbjct: 198 WLTSNVIRGRIGRSWMMIRDMDIAAELMGIKPLNAKLSAFAMSSYLCGVSGAMLVFFWLG 257 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + F + + ++ +VI+GGM SL A + + L + + Sbjct: 258 SVEAESFSINLSFQILFMVIIGGMGSLIGCFMGAAFIFVLPLLIRAVTRGVGLDISGAMI 317 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 T + + +++ H L RL Sbjct: 318 E--HISTMSIGALIIFFLIVEPHGLARL 343 >gi|206578612|ref|YP_002240186.1| branched-chain amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288936931|ref|YP_003440990.1| inner-membrane translocator [Klebsiella variicola At-22] gi|290510012|ref|ZP_06549382.1| branched-chain amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] gi|206567670|gb|ACI09446.1| branched-chain amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288891640|gb|ADC59958.1| inner-membrane translocator [Klebsiella variicola At-22] gi|289776728|gb|EFD84726.1| branched-chain amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] Length = 349 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 71/353 (20%), Positives = 128/353 (36%), Gaps = 44/353 (12%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA++ + L YI + I I+++ A +++ G G LSL A+G Sbjct: 15 LAIIVICIALLAGINVVFNDYIVRVISTIFIFMILAVSYNLINGVTGQLSLEPNGFVAVG 74 Query: 78 AYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 AY + + +S + + A + + +P + R Sbjct: 75 AYVTALLILSSDSKVDMFEMAAPSPWILSLHAGFLPALLISGLCAAALAVCLAVPVFRVR 134 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL I + + I ITNG G+ + Sbjct: 135 GDYLAIVTLGFGFIIKILAINNPQITNGAIGLNDIPQQPH-------------------- 174 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + + L+ +IL L + + IRD++ A ++ K AFA S Sbjct: 175 ----LLFWCGLFALLATGMILQLVWSKYGRMMKAIRDDEDAAIAMGVNTFRIKTCAFATS 230 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + F G+ G A+ ISP +F F ++ I++LGG+ S + T +++G E Sbjct: 231 AFFEGIGGGLLASLLTTISPGLFDFMLTFQLLIIIVLGGLGSTTGALLGTVLVVGSGEWL 290 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ ++ + + L +++L LL + R Sbjct: 291 RFLDQPLQFFGHDLG-AYPGLRMVVFSLLLLIIMLFAREGLLGKKEIWQMGRR 342 >gi|254423465|ref|ZP_05037183.1| amino acid or sugar ABC transport system, permease protein, putative [Synechococcus sp. PCC 7335] gi|196190954|gb|EDX85918.1| amino acid or sugar ABC transport system, permease protein, putative [Synechococcus sp. PCC 7335] Length = 400 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 91/326 (27%), Gaps = 29/326 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----- 85 + + + L + A G+ ++ G GLLSL I +AIG Y + Sbjct: 15 FPLILSNFRLGLLGRFLCLSIVALGIDLIWGFTGLLSLGHGIFFAIGGYVIAMNLQLQSL 74 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN---------- 135 S + + + + + P + + Sbjct: 75 SEGSIPDFFSLYGVSELPAFWRPFYSFPVTLIAIVVIPSIIAGLLGYLVFRNRIRGVYFS 134 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 IL + + + + + F + Y V + + L+ Sbjct: 135 ILTQAALVVFFNFFNGQQELINGTNGLKTNTTELFGQSVGGDGMQFTFYCVTVVLLALTY 194 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + WL IRD++ K+ FAVS G+AGA + Sbjct: 195 GLCRWLTSGRFGRMLIAIRDDENRVRFSGYDPTAFKVLVFAVSGGIAGVAGALYTVQSGI 254 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +SP + +I ++ V +GG SL + L S Sbjct: 255 VSPQYMSIAFSIEMVIWVAVGGRASLVGAIIGALAVNWGRALLSE--------------S 300 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + +V+ + ++ Sbjct: 301 YPEIWLFFQGALFLIVVTVLPDGIIG 326 >gi|171060111|ref|YP_001792460.1| inner-membrane translocator [Leptothrix cholodnii SP-6] gi|170777556|gb|ACB35695.1| inner-membrane translocator [Leptothrix cholodnii SP-6] Length = 354 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 75/343 (21%), Positives = 136/343 (39%), Gaps = 23/343 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + ++ L + A S+ ++ I LI + A GL+I+VG Sbjct: 18 QIFPIRQDR------IAVLLLLAFAALVVPAIASEYVFRAILIPFLILSLAALGLNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA-CGMIMGLPSLKFRGD 120 G +SL A+GAY+ R + + + G++ G+PSL+ +G Sbjct: 72 YCGQISLGTGAFMAVGAYAAYNFSVRIDGMPLIAALLLGGLCATGVGVLFGIPSLRIKGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL ++ + TN ++ + + Sbjct: 132 YLAMATLAAQFFTDWAFLRIRWFTN-------------DSSSGSVSVAGLNVLGIPIDTP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y L + A + L R I W +RD A + I+AKL+AFAVSS Sbjct: 179 VQKYLFCLAFLSVFALLAKNLVRGNIGREWMAMRDMDVAAAVIGIRPIYAKLTAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +G+AG + P F + ++ +VI+GG+ S+ A ++ + L Sbjct: 239 IVGVAGGLWGFVHLGSWEPAAFSIDRSFQLLFMVIIGGLGSIMGSFFGAAFIVLLPILLD 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 N Y+ + + + + + +++ H L RL Sbjct: 299 --NAPYWFGIPIDTATAAHLTSMIFGALIVFFLIVEPHGLARL 339 >gi|269792299|ref|YP_003317203.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099934|gb|ACZ18921.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] Length = 290 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 65/309 (21%), Positives = 130/309 (42%), Gaps = 40/309 (12%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y+ + I + I + A G+S++ G G+ SL A+GAY+ IL + + L Sbjct: 2 DQYLQGIIILLCINCIAAMGVSLLTGFTGIFSLGHAGYMAVGAYAVAILTVEHEIPWALA 61 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + + + ++G+P+LK GDY AIA++ + E + I+ W+ +T G G + Sbjct: 62 LIAAGLFAALLAFVVGVPTLKLMGDYYAIASIGLGEAIRLIIENWQSVTRGARGYPGIED 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 V +G+ L + + +L ++ ++ RD Sbjct: 122 FVSAP-------------------------VAVGIALLLGTFMFFLVQSNFGRGFKACRD 156 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A L ++ + +S + G+AG A I P MF +++ + ++V+ Sbjct: 157 DYLAASLLGFNTARYRVLSLTISGFYCGIAGGMLAGFMGFIQPVMFDINKSTELTAVVVF 216 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ SLS T ++ V EL ++ Y + + L L++++R Sbjct: 217 GGLGSLSGTLIGTTVITLVTELFRPISQY---------------RMLIYGLVLVLIMVLR 261 Query: 336 SHSLLRLRT 344 ++ R Sbjct: 262 PEGIMGQRE 270 >gi|170780970|ref|YP_001709302.1| putative integral membrane transport protein [Clavibacter michiganensis subsp. sepedonicus] gi|169155538|emb|CAQ00650.1| putative integral membrane transport protein [Clavibacter michiganensis subsp. sepedonicus] Length = 323 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 123/307 (40%), Gaps = 4/307 (1%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 Y + GL I G GLL+ AIG Y++ I Y +W + + + S Sbjct: 17 TTAAYALATVGLVIHFGFTGLLNFGQAGFMAIGGYAFAITAVMYEWPVWASLLAAIVAST 76 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQ-NILIKWKPITNGKAGIYVADRLYFLGTTV 163 +I+G+P+L+ R DYL+I T+ +EI + ++ G + F Sbjct: 77 VFALILGIPTLRLRADYLSIVTIAAAEIIRLSVKTPEFSSVTGGSEGINGAANGFNALNP 136 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 RF ++ + ++ V G+ ++ ++ L R+ + +R+++ A +L Sbjct: 137 LPEGRFGAGVLTYSSDQWWIRIVGWGLVGIACLLVFLLMRSPWGRVLKGVREDEDAVRAL 196 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + K+ A + F G+AG F + PD + + +I++LGG ++ Sbjct: 197 GKNVYSYKMQALVLGGVFGGLAGVVFILP-RSLQPDNYGTQLTFFLYTIMLLGGAATIFG 255 Query: 284 IAKATAILIGVVELCCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + I + L G+ L ++ +AL L+++ R + Sbjct: 256 PVIGSIIFWVTLSLSDGLLSLAVTNEWLPLSSTQQGPIRFIIVGVALMLLVIFRPQGIFG 315 Query: 342 LRTPSNF 348 + ++F Sbjct: 316 KKKETHF 322 >gi|71906547|ref|YP_284134.1| inner-membrane translocator:ABC transporter related [Dechloromonas aromatica RCB] gi|71846168|gb|AAZ45664.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Dechloromonas aromatica RCB] Length = 951 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 113/333 (33%), Gaps = 31/333 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L + + ++ ++ + + + A GL ++ G GL S +GA Sbjct: 361 LVLAVFLGAIAVAPLVLPEFYVTLLNYVGLSALVALGLVLLTGVGGLTSFGQAAFVGLGA 420 Query: 79 YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 YS + G S W + + +I+ +I+G +LK G YL + T+ Sbjct: 421 YSTAWLTTTADLPSWLAFTGGSPWAALLLGLVITATVAIILGSVTLKLSGHYLPLGTMAW 480 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + + G AG+ + G + + YY++ Sbjct: 481 GISLFFLFGNMEFL-GGHAGLSNLPAIKIFGFELLDNR--------------YYYYLVWA 525 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L + A R ++ ++ A++ F +++ AG + Sbjct: 526 FVLAALFTTKNLLDSREGRAIRALKGGMVMAEAMGVDTSRARMVIFVIAALHACAAGWLY 585 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A + ++P F I + + ++GG + ++ + + + F S Sbjct: 586 AHLQRFVNPTPFGLHIGIEYLFMAVVGGAGQVWGALVGAGVITVLKQWLQDILPKLFGSA 645 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F T + + + +V+ L L Sbjct: 646 GHF-------ETIVFGLMMIVVLHRAREGLWPL 671 Score = 44.1 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 76/278 (27%), Gaps = 22/278 (7%) Query: 50 VMFAWGLSIVVGSLGLLSLNCVIA------YAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103 + G ++ + G L A+ ++V+ ++ I Sbjct: 71 GVLTLGADVITATPGRRRLGQSALWNLVYPLAVAGLTWVLPLQELPH--LAKACLALAIV 128 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 G ++ + + + + LI+S +++ + G G A Sbjct: 129 VPMGPMLYRIAFQPVAEAPVLVLLIISVALHLLMVGLGLLIFGPEGSRTAPFSDAQ---- 184 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 ++ VLL L + L+ RT A R N+ + Sbjct: 185 --------IEIGSLMIGGHTIVVLLASLLLIVGLYLYFDRTLAGKALRATAINRNGARLM 236 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + A F ++ ++G A F + I+GG+ S Sbjct: 237 GISPALAGRQTFFFAALIGTLSGLLVAPLTTV--YYDSGFLIGLKGFVAAIIGGLASYPL 294 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 A I+ + + + L+ + Sbjct: 295 AAAGAIIVGLLESFSSFWASAFKDVLVFTLIIPVLIWL 332 >gi|328952955|ref|YP_004370289.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] gi|328453279|gb|AEB09108.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] Length = 346 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 127/356 (35%), Gaps = 45/356 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + L L L T + Y + I I++ A +++ G G L L Sbjct: 6 RRRNLFLTSGTAILLFLLLAGAQTWANDYHIRILNNIAIFITMAVSYNLINGVCGQLHLG 65 Query: 70 CVIAYAIGAYSYVILG-------------------SRYGLSIWLLIPVSAMISGACGMIM 110 +GAY+ +L +++ S + + +++ + Sbjct: 66 PNAFVTLGAYTAALLTLSPAEKQLSFLLSPLIWPLNQFSTSFPVALMAGGLVAVVFAFLT 125 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 G P L+ RGDYLAI TL E+ + + + +TNG G+ Sbjct: 126 GFPVLRVRGDYLAIVTLGFGEVVRVLANNLQSVTNGPLGLKGLPPFTN------------ 173 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 + G ++ +I + + A + IR+++ A ++ Sbjct: 174 -------------LWWTWGTAVMALVVITGIIHSGYGRAMQAIREDETAARAMGIDPFRH 220 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 L AF VS+ F+G+AG A ISP +F F ++ I++ GG+ S + A + Sbjct: 221 LLLAFLVSAFFLGVAGGLLAHLITTISPTLFTFFLTFNLLIIIVFGGLGSTTGAVLAAIV 280 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 L E + + +R + L +++ R LL + S Sbjct: 281 LTWGGEWLRVVEEPILIGCIHLPGIPGLRAVIFSFLLLVMILFFR-RGLLGRQEFS 335 >gi|222082220|ref|YP_002541585.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726899|gb|ACM29988.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 324 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 71/323 (21%), Positives = 120/323 (37%), Gaps = 30/323 (9%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 Y + L++ + A GL++ +G G +SL AIGAY + Sbjct: 18 VALPFTQSNYGILVLCSWLVFSIAAMGLNLTLGYAGQVSLAQAGFMAIGAYITALTTMAG 77 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L + S + G+++G P+L+ + +LA TL + + +L + +TNG Sbjct: 78 VPWP-LAMLASMLACFMIGLLLGYPALRVQHHFLAFITLAFNALVVLVLRNEEWLTNGTY 136 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 GI R I Y+ +L + L+A + + R+ Sbjct: 137 GIAGIARPVVF--------------GFATQRPIPFYFFVLALFILTAFALYGIIRSPWGR 182 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A++ +R+N SL I L AFA+ SAF G+AGA A I P F + ++ Sbjct: 183 AFKALRENPVRANSLGVDIRRITLLAFAIGSAFGGLAGALLAQLTQYIDPQSFGLTISLR 242 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 V+ +VI+GG ++I E YY L I + Sbjct: 243 VLLMVIVGGAGFFFGPILGALLIILAPEFFRFTEGYY---------------LMLYAILV 287 Query: 329 FLVILMRSHSLLRLRTPSNFLER 351 +++ L L + Sbjct: 288 IALMIFCPSGLFGLVERMKTRWK 310 >gi|89899029|ref|YP_521500.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89343766|gb|ABD67969.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 337 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 118/324 (36%), Gaps = 21/324 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 V + L L + +Y + +I+++ +FA L ++VGS GL+ + IG Sbjct: 6 FFFVAAAFVLLALWPLMAGQYGVDLVTKIMVFAIFALSLELLVGSTGLVCFGQAAFFGIG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ V+L + G L + + +++ A ++ I + + Sbjct: 66 AYATVLLTPQDGAPSLLWLLPACVLAAALYALLVGALSLRTKGVYFIMVTLAFAQMAYYV 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + P+ G GIY+ + LGT + + + Y L Sbjct: 126 VHDTPLGGGTDGIYLMAKPVVLGTLLD------------LDKPMAFYGFTLACLTAVFGF 173 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ A IR N++ + + KL+AF +S G+AG FA ++ Sbjct: 174 LTLLLRSRFGRALAGIRVNEQRMRATGFSTYPYKLAAFVISGGMAGLAGFLFAVKDGFVN 233 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P++ + + V+ ++ILGG+ L + E F Sbjct: 234 PELISWHLSGEVLIMIILGGLGHLRGALIGAFAFALLQEFFKS---------EAIFGEFA 284 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + +++ + + L+ Sbjct: 285 KHWHLGLGLSIIACVALLPRGLVG 308 >gi|309779705|ref|ZP_07674463.1| branched-chain amino acid ABC transporter, ATP binding protein [Ralstonia sp. 5_7_47FAA] gi|308921504|gb|EFP67143.1| branched-chain amino acid ABC transporter, ATP binding protein [Ralstonia sp. 5_7_47FAA] Length = 608 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 113/299 (37%), Gaps = 15/299 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + +++ + + + ++ ++ I +Y + A GL ++ G GL S +G Sbjct: 22 VLTALFVVVLVLIPIVPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS L ++YG+S W+ + +I+ ++GL +++ G YL +AT+ + Sbjct: 82 AYSTAYLTTQYGVSPWIGLWAGLVITVVSAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + I + M+Y++ + ++ Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNVLGKSLQTGREMFYLIWAVVVVAVLA 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + A R ++ ++ + K+ F ++ ++G +A + ++ Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVFAAVLACISGFLYAHLQRAVN 246 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P F + I + + ++GG+ + +L + + + S F+ Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQSILPKLLGSNGNFEIIV 305 >gi|254479276|ref|ZP_05092618.1| putative amino acid or sugar ABC transport system, permease protein [Carboxydibrachium pacificum DSM 12653] gi|214034782|gb|EEB75514.1| putative amino acid or sugar ABC transport system, permease protein [Carboxydibrachium pacificum DSM 12653] Length = 319 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 136/319 (42%), Gaps = 29/319 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 ++ LF + + LIY + A GL++++G G +SL A+GAY+ Sbjct: 1 MIAALFPPILNLPGSLQYLLDLSLIYAIVAIGLNLLMGYAGQISLGHGAFLAVGAYTSAY 60 Query: 84 LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 L L ++ + +S +++G G+ +G+P+L+ G+YLAIATL I W Sbjct: 61 LTLNLHLPFFIALILSGLVTGIVGIFLGIPALRLEGNYLAIATLGFGIAVTQIFAIWTSF 120 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 T G +GI F + YYV+L + + + + R Sbjct: 121 TGGFSGIRPPKPEIFGFKF---------------SSYLSYYYVILVVLIIVIILTQNIVR 165 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-- 261 T I + +RD++ A ++ + + K AF +S+ + G+AG+ +A ++P + Sbjct: 166 TKIGRSLMAMRDSEIAAKAMGINVSYYKTLAFGLSAFYTGIAGSLYAHLLGFMTPYDYAF 225 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 ++ ++++++GGM ++S I+ + +L ++ S Sbjct: 226 SIGMSLNFLAMIVIGGMGTISGSIIGAIIMTWLPQLTSNLS------------SIKSLSQ 273 Query: 322 TLMVIALFLVILMRSHSLL 340 + + V++ + + Sbjct: 274 IITGAIIIAVVMFYPNGIA 292 >gi|293607218|ref|ZP_06689559.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease [Achromobacter piechaudii ATCC 43553] gi|292814310|gb|EFF73450.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease [Achromobacter piechaudii ATCC 43553] Length = 543 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 87/291 (29%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY ++ + + + + + + ++ Sbjct: 270 ITFGLMGVINMAHGELLMIGAYVTYVVQTLFRAWLPAWLDWYVVAALPLAFVVTALVGMA 329 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ + S + + Sbjct: 330 LER--TVIRWLYGRPLETLLATWGISLMLMQGVRTLFGAQNVEVGNPSWMSGGITVLGGL 387 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ + + L T + R I N++ + + AF + Sbjct: 388 VLTYNRLVIIGFAFFVVFLVWVLLNHTRLGLFVRAITQNRRMADCVGVPTGRIDMLAFGL 447 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A S+ + +V+LGG+ L+ A L GV + Sbjct: 448 GSGIAGLAGV--ALSQLGNVGPDLGRGYIVDSFMVVVLGGVGQLAGTVIAALGLGGVNKF 505 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L + R L R S Sbjct: 506 LEPYAGAVMAK-------------ITILVLIVLFVQKRPQGLFAPRGRSVE 543 >gi|89902822|ref|YP_525293.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89347559|gb|ABD71762.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 345 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 72/310 (23%), Positives = 127/310 (40%), Gaps = 17/310 (5%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + Y + + I V A GL+I+ G GL+SL +GAY+ IL R G Sbjct: 36 FPFMASDYWLYLACLVSINVASATGLNILTGYTGLVSLGQAAFMGLGAYTVAILEIRVGS 95 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 L + ++ A G+++G+PSL+ +G YLAIAT+ S I + Sbjct: 96 PFLLNLLAGGFVAMAGGLVVGIPSLRVKGLYLAIATIAASFIAHFLFAN----------- 144 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 F G T + + +Y++++ + L L RT + A+ Sbjct: 145 -----TAFTGRTAGLTLPPASLFGVVLDTSFRLYWIIVPVTLLMLLGAANLFRTRVGRAF 199 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 IRD + L ++ KL +F +SS + G+AG +A ++P+ F S +I + Sbjct: 200 IAIRDRDISAEVLGIALLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTPESFPLSMSIFFL 259 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +I+GGM S+ + V EL + + + T + + + Sbjct: 260 AAIIVGGMGSILGGILGAIFMTMVPELLK-LAVGLLPGGSELTVFLSPVRTVVFGLLIIG 318 Query: 331 VILMRSHSLL 340 ++ H L Sbjct: 319 FLVFEPHGLA 328 >gi|83746319|ref|ZP_00943372.1| amide-urea transport system permease protein [Ralstonia solanacearum UW551] gi|207742757|ref|YP_002259149.1| permease transporter protein [Ralstonia solanacearum IPO1609] gi|83727069|gb|EAP74194.1| amide-urea transport system permease protein [Ralstonia solanacearum UW551] gi|206594151|emb|CAQ61078.1| permease transporter protein [Ralstonia solanacearum IPO1609] Length = 556 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 282 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRNHFPNAFDWYLPAALPAAFLAAAFVGFA 341 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 ++ + + +L + + + S + + Sbjct: 342 LER--SVLRHLYGRPLETLLATFGVSLLLMQAVRSLFGAQNVEVANPSWMSGGIALYPGL 399 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + A L RT + R N+ + AFA Sbjct: 400 ILPTNRLVILAFALVVVAMAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 459 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L + + Sbjct: 460 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 517 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R L L+ S Sbjct: 518 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 555 >gi|326318179|ref|YP_004235851.1| urea ABC transporter permease UrtB [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375015|gb|ADX47284.1| urea ABC transporter, permease protein UrtB [Acidovorax avenae subsp. avenae ATCC 19860] Length = 526 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 87/296 (29%), Gaps = 17/296 (5%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY+ ++ + + + + + Sbjct: 247 VALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQKYLPGAFDWYLVAAVPVAFLAS 306 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + +G + + Sbjct: 307 ALMGAVLER--GVIRFLYGRPLETLLATWGISLVLQQLVRSLFGAQNVGVENPAWMSGGV 364 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + ++ + + + RT + R + N+ + Sbjct: 365 QVLENLQLPWNRLVIVAFAFAVLGGVAFLIGRTRLGLFVRGVTQNRPIASCMGVNTARVD 424 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 AFA+ S G+AG A S+ + +V+LGG+ L+ A L Sbjct: 425 TYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVYAALGL 482 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +++ + + I R + ++ + Sbjct: 483 GVLNKFLESWTGAVLAK-------------IAVLVLIIVFIQKRPQGIFAVKGRTA 525 >gi|39936730|ref|NP_949006.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] gi|39650586|emb|CAE29109.1| putative ABC transporter system permease component, possible fused protein [Rhodopseudomonas palustris CGA009] Length = 537 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ L S +I+ ++ Sbjct: 258 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEAIRTRYPALFDYSLLIAVPLAFLVA 317 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + S Sbjct: 318 GAVGVLIER--TVIRFLYGRPLETLLATWGLSLILQQAVRTLFGPTNREVGNPSW-MSGA 374 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++L + A ++ LR T++ R + N++ S+ Sbjct: 375 FELGEMTITYNRLWILCFTLAVFALLLAMLRYTSLGLEMRAVTQNRRMAASMGIATSRVD 434 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 435 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 492 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + +++ + L I R L L+ + Sbjct: 493 GIANKFLEPVAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAVE 536 >gi|260459978|ref|ZP_05808231.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259034189|gb|EEW35447.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 326 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 132/320 (41%), Gaps = 22/320 (6%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------YG 89 Y LI+ + GL++ G GL ++ AIGAY+ +L + +G Sbjct: 6 YGAFFLTTALIFSLITLGLNLQWGLTGLFNVGLAGFVAIGAYTSALLTTPDDAARLGGFG 65 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L I + + ++ G + G+ +L+ R DYLAI T ++ + Q + + + +T G G Sbjct: 66 LPILVGWAGAMVVGGIAAALTGMATLRLRSDYLAITTFGVAVVVQLVALNAQKLTGGPFG 125 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 I R F + +++ + V+ + ++ + L R+ Sbjct: 126 IGFIPRP------------FGSLAETPLLFNLSNLAVVAAVTLIAYLALEHLSRSPWGRV 173 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + +R++++A SL + F ++ AFAV A + +AGA A I+PD + V Sbjct: 174 LKALREDERAAISLGKSARFYRVQAFAVGGAIMALAGALQAHFTGFIAPDNYLPILTFQV 233 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++I+GG S + ++ G+ + F + + + L Sbjct: 234 WVMLIVGGSGSNLGAVIGSILVWGIWAGSGTLTSVLFPPEQQ--ARAASLQIAAIGVMLC 291 Query: 330 LVILMRSHSLLRLRTPSNFL 349 +++L+R + LL R Sbjct: 292 VILLIRPNGLLGDRPRRLRF 311 >gi|166363361|ref|YP_001655634.1| urea transport system permease protein [Microcystis aeruginosa NIES-843] gi|166085734|dbj|BAG00442.1| urea transport system permease protein [Microcystis aeruginosa NIES-843] Length = 384 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 106/346 (30%), Gaps = 28/346 (8%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K I + +V +++F L + + + L + A G+ ++ G GLLSL Sbjct: 16 KKKLITEIAVIVGLVVIFAVLLPLALSAFRLRLLGRFLSLAIVALGIDLIWGYTGLLSLG 75 Query: 70 CVIAYAIGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 I +A+G Y+ + + + + ++ +P++ Sbjct: 76 HGIFFALGGYALAMYLNLQLPPGQMPEFFTLYGVTELPFIWQPFYSLPLTILALIIVPAI 135 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 I + ++ +IL + + + F Sbjct: 136 VAGLLGYLIFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDTQTIFGLLVG 195 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ Y + + + WL IRD++ + K+ F Sbjct: 196 SDAVQVAFYLLTIVCLLAIYLLCRWLTTGRFGRLLVAIRDDEVRVRFSGYDPTWFKVLVF 255 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 A+S A G+AGA + I+P+ + +I ++ V +GG +L T ++ Sbjct: 256 AISGAIAGVAGALYTVQTGIITPNSMDVAFSIEMVIWVAVGGRATLVGAVVGTLLVRLAQ 315 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +V+ + LL Sbjct: 316 TFLSE--------------QFPEVWVFFQGALFLIVVTVLPDGLLG 347 >gi|149187787|ref|ZP_01866083.1| ABC transporter, membrane spanning protein (ribose) [Vibrio shilonii AK1] gi|148838183|gb|EDL55124.1| ABC transporter, membrane spanning protein (ribose) [Vibrio shilonii AK1] Length = 662 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 109/316 (34%), Gaps = 13/316 (4%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L K + L A++ + S ++G+Q + G+ + + G + Sbjct: 9 LQKLASLGGLFALIIAFSI--TSPHFFSMDNAMTVGLQTSTITIIGIGVMLTI-LTGGID 65 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L+ A+ + + G+ + + + V + CG+I GL K R ATL Sbjct: 66 LSIGSVMALSGVTAAM-AVNAGMPVPVGMAVGVLTGAFCGLISGLCVSKLRLPPFI-ATL 123 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M + + + + ITN + + +LG + +I + Y + Sbjct: 124 GMMMMARGVAL---YITNAAPVSGMPESFSYLGNGALFRMVEIGENGFPIIKFAGIPYPV 180 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L M + A+ L + + I N++A K +A+ S G+AG Sbjct: 181 LVMLLVVAAFSFLLTKMRLGRYLYAIGSNEEAARLSGIDTQKVKTAAYVASGFLAGLAGV 240 Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302 A+ P+ +E + S V+ +GG+ ++ + I+ + Sbjct: 241 IIASRLVTAQPNGSVMAELDAIASAVVGGTSLMGGVGTVFGAVVGSFIIGVLRNGLNMNG 300 Query: 303 FYYFNSLLKFDCSFNM 318 +F + Sbjct: 301 VSFFVQQIVIGGVIIA 316 >gi|94310173|ref|YP_583383.1| inner-membrane translocator [Cupriavidus metallidurans CH34] gi|93354025|gb|ABF08114.1| putative branched-chain amino acid ABC transporter, permease protein [Cupriavidus metallidurans CH34] Length = 354 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 71/337 (21%), Positives = 136/337 (40%), Gaps = 26/337 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R + L + L L S KY + +++I +FA L +++G GL Sbjct: 13 IRRPAWMATAGWLVALAVLCAMPMLLTADSHKYYIELLSKVMIMAIFALSLQLLIGYTGL 72 Query: 66 LSLNCVIAYAIGAYSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +SL +A+ AY+ +L + WLL+ + + A +++G L+ RG Y + Sbjct: 73 VSLGHAAYFAMAAYATAMLAPESGPGNGWLLLFGAVGAAAALALVVGALVLRTRGIYFIM 132 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL +++ + I G G Y+ R F F V + Y Sbjct: 133 VTLAFAQMVYFVFHD-TKIAGGSDGTYIYFRPEFG---------LFSARPVTVNDPVQFY 182 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 +++L L+ + + L R+ +A IR N++ + +L AF V AF G+ Sbjct: 183 WLVLVALALTVAALTLLLRSRFGHALVGIRHNEQRMRAAGFGTYRYQLGAFVVGGAFAGL 242 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG +A ++P++ + ++ + +VILGG+ SL+ + + E + + Sbjct: 243 AGYLYAIQFGFVNPEIASWHQSGNAMLMVILGGVGSLAGAVLGAFSFVLLAEWFGTLTKH 302 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + LM + L + + L+ Sbjct: 303 W---------------QLLMGGFIILAVALLPRGLVS 324 >gi|139437971|ref|ZP_01771524.1| Hypothetical protein COLAER_00511 [Collinsella aerofaciens ATCC 25986] gi|133776168|gb|EBA39988.1| Hypothetical protein COLAER_00511 [Collinsella aerofaciens ATCC 25986] Length = 359 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 76/346 (21%), Positives = 145/346 (41%), Gaps = 27/346 (7%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + ++D + + VV ++F + I + I Y++ A L++VV Sbjct: 1 MKFLKDKQTRHDFVTYAMCVVAFAIVFFMQSNHMIPRMIAGQLVPITAYIVMAISLNLVV 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIMGLP 113 G G LSL ++GAY+ ++ + + + I V A+ + G ++G+P Sbjct: 61 GIAGDLSLGHAGFMSVGAYTGIVTAVALESTVPSDPMRLIISIVVGAIAAAILGFLIGIP 120 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD-----RLYFLGTTVRSLIR 168 L+ GDYLAI TL EI + ++ + + + + + L Sbjct: 121 VLRLSGDYLAIVTLAFGEIIKEVVTCLIVGVDSRGLHVIFNITGNSTIDDLHLLEDGTAI 180 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 + + + + ++ I+L L R+ A +RDN+ A S+ ++ Sbjct: 181 IKGAQGASGVSTYSTFLAGAILVMVALVIVLNLVRSRTGRAIIAVRDNKIAAESVGISVT 240 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 ++ AF VS+A G AGA F + ++S F F+ +I+++ V+LGG+ ++ A Sbjct: 241 QYRMIAFVVSAALAGAAGALFGGNFSQLSATKFDFNTSILILVFVVLGGLGNMRGSVIAA 300 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 A+L + EL + Y + I L LV++ Sbjct: 301 ALLTVLPELLRQFSDY---------------RMLIYAIVLILVMVF 331 >gi|159027922|emb|CAO87084.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 384 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 107/346 (30%), Gaps = 28/346 (8%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K I + +V +++F L + + + L + + A G+ ++ G GLLSL Sbjct: 16 KKKLITEIAVIVGLVVIFAVLLPLALSAFRLRLLGRFLSFAIVALGIDLIWGYTGLLSLG 75 Query: 70 CVIAYAIGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 I +A+G Y+ + + + + ++ +P++ Sbjct: 76 HGIFFALGGYALAMYLNLQLPPGQMPEFFTLYGVTELPFIWQPFYSLPLTILALIIVPAI 135 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 I + ++ +IL + + + F Sbjct: 136 VAGLLGYLIFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDTQTIFGLLVG 195 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ Y + + + WL IRD++ + K+ F Sbjct: 196 SDAVQVAFYLLTIVCLLAIYLLCRWLTTGRFGRLLVAIRDDEVRVRFSGYDPTWFKVLVF 255 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 A+S A G+AGA + I+P+ + +I ++ V +GG +L T ++ Sbjct: 256 AISGAIAGVAGALYTVQTGIITPNSMDVAFSIEMVIWVAVGGRATLVGAVIGTLLVRMAQ 315 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +V+ + +L Sbjct: 316 TFLSE--------------QFPEVWVFFQGSLFLIVVTVLPDGILG 347 >gi|152981502|ref|YP_001352470.1| ABC-type branched-chain amino acid transport system, permease component [Janthinobacterium sp. Marseille] gi|151281579|gb|ABR89989.1| ABC-type branched-chain amino acid transport system, permease component [Janthinobacterium sp. Marseille] Length = 346 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 130/338 (38%), Gaps = 36/338 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + +L L Y+ S+ + I+V+ A L++++G G LSL V + +G Sbjct: 5 ITFLVSVLALALLPLIWPDPYLLSVVASVGIFVIAAISLNLLLGYTGQLSLGHVAFFGLG 64 Query: 78 AYSYVILGSRYG--------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 AY+ +L + +W+ + G ++G + + RG Y Sbjct: 65 AYTTSLLSLGFDVTLWGMTEPLVVTAKPVWVSFACGIAFAAIAGWLLGKLAFRVRGAYFV 124 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 I T+ +++ + + + W +T G + L + ++ Sbjct: 125 IVTISFAQVMRMVSLNWVDLTEGPMALNNIPALTM---------WVPGEGVIDLASKLST 175 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y+++L + +S ++ + + I A +R+N+ S+ + A ++ G Sbjct: 176 YWLVLAVAVVSYLLVAAIVHSRIGRAMIALRENETLARSVGIRVTHYLGIATIFAAGIAG 235 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 AG +A + I PD+F F I+++ +VI+GG +L+ + + E+ G+ Sbjct: 236 AAGGLYAHTVRIIDPDVFMFMFTIMMVIMVIVGGKGTLAGPVVGGLLFGLLPEVLRGVVS 295 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + V++ ++ Sbjct: 296 -------------PEIQWMIYGVLMIAVLVFMPKGVVP 320 >gi|307132621|ref|YP_003884637.1| branched-chain amino-acid ABC transporter permease [Dickeya dadantii 3937] gi|306530150|gb|ADN00081.1| branched-chain amino-acid ABC transporter permease [Dickeya dadantii 3937] Length = 347 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 73/335 (21%), Positives = 122/335 (36%), Gaps = 44/335 (13%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84 YI + I I+++ A +++ G G LSL AIGAY +L Sbjct: 33 NDYIVRIFCNIFIFMILAVSYNLINGVTGQLSLEPNGFVAIGAYITALLLLSADAKTNMF 92 Query: 85 --------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 S + +S + + A + + P + RGDYLAI TL I + Sbjct: 93 EMTAPSPLILAVHASFLPALIISGVCAAAVAVCLSFPVFRVRGDYLAIVTLGFGFIIKIF 152 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 I TNG G+ ++ + Y + + Sbjct: 153 AINNPQFTNGAIGLNEIPQVSH------------------------ILYWCGFIALAAVL 188 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 IL L + A + +RD++ A ++ K AFA S+ F G+ G A+ I Sbjct: 189 FILQLVYSKYGRAMKAVRDDEDAAIAMGINTFRVKTCAFATSAFFEGIGGGLLASLLTII 248 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SPD+F F ++ I++LGG+ S + T I+IG E ++ Sbjct: 249 SPDLFDFMLTFQLLIIIVLGGLGSTTGAILGTIIVIGSGEWLRFLDQPLTLFGQDLGAH- 307 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L +++L LL + + R Sbjct: 308 PGLRMVVFSLVLLVIMLFAREGLLGKQEVWDIRRR 342 >gi|297162877|gb|ADI12589.1| inner-membrane translocator [Streptomyces bingchenggensis BCW-1] Length = 605 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 129/339 (38%), Gaps = 36/339 (10%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 +RL + + + + + + Y + G Q+LI+ + A L++V GS Sbjct: 302 PIRLRWWQALALIG-------VAAGVVPWVADDYQLTTGTQVLIFAILALSLTLVSGSAA 354 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +SL A+GAY+ +L +G + + + + G ++ P+ + G Y++I Sbjct: 355 QISLGQAGPMAVGAYTSALLVGEHGWPFLAGLFAAGLAAAVVGTVLMSPTWRLSGHYVSI 414 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 ATL + + ++ +T+G GI G +I Y Sbjct: 415 ATLGIGAVTVAAILNLDWLTHGPLGITAIPPPSLFGHQ--------------IITPTETY 460 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + L + ++ +++ L+++ + W + ++ A + K A+AV + G+ Sbjct: 461 LLDLTVLLVALGLVVRLQKSFLGTVWSAVGADETALGASGLRPADYKALAYAVGAFVAGL 520 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+ A + P MF +++ ++I++LGGM S +L+G E+ Sbjct: 521 AGSLLAHQYSYLDPTMFSPELSMLALTIIVLGGMNSPFGAVLGAVVLVGAPEVLRMAQDA 580 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + I R L R Sbjct: 581 RLLTYGVLLLLL---------------IRFRPQGLWARR 604 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 91/294 (30%), Gaps = 25/294 (8%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107 Y + A GLS++ G +++ +A G S L + +W I + G Sbjct: 14 TYALVAIGLSLIFGVSNVVNFAQGSVFAAGTMSGWWLIAEQHWPLWAAIAGVCAFTAVLG 73 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + + L +++ IA L+ + +L + G L L V Sbjct: 74 LAVNLLAVQPLAKVPPIAALLATYAVSVVLDNLSQVVFGPDTRRFPQALDTLNFHVGGFR 133 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + + + +L+ T A R + A + + Sbjct: 134 -----------FGTLDVVMFAVSVGCILLLGGFLKFTKYGQAIRATAQDSDAALQMGVPV 182 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + +F ++SA G+AG ISP + + + LGG+ SL Sbjct: 183 GRVRNLSFMLASALGGLAGVLVGMYNSNISPSS-GTAAGLTAFTAATLGGLGSLPGAVLG 241 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L V ++ ++ L LV+ +R LL Sbjct: 242 GLALGIVEAFGISYWGAGVDN-------------LIIFGVLLLVLWLRPGGLLG 282 >gi|86137311|ref|ZP_01055888.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] gi|85825646|gb|EAQ45844.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] Length = 390 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 126/359 (35%), Gaps = 32/359 (8%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 ++ +L + P +L F + ++ + + +I+ +FA G +I+ G G LS Sbjct: 4 VVAVLTLCAPFILNPFPTDSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGH 63 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G+YS V + +++ I +S +ISG +++G SL+ G Y +I TL + Sbjct: 64 AAFLGVGSYSAVWMFKLLSMNVVPAIMLSVVISGLFALLIGFVSLRRSGIYFSILTLAFA 123 Query: 131 EIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 ++ N+ P G + + F Sbjct: 124 QMSFNLAYSVLTPITNGETGLQLTLEDPRVLGVSATADGSIPVTNLFGMEMRSTFEMVVG 183 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + YY+ + + + + + R+ R ++ NQ+ L+A Sbjct: 184 PWAFQFNAGYYLCALILLAAFYLSIRIFRSPFGMMLRAVKSNQQRMNYTGLNTKPYTLAA 243 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F +S + G+AG A+ + +++ + V+ + ILGG +L + Sbjct: 244 FVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYF 303 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLVILMRSHSLL 340 + +N + F + I LV++ L+ Sbjct: 304 ENIFSKINDNVLHGWFSFMPDGLEDFVVFIIHPFIGKGWHLTLGILFMLVVVFLPGGLV 362 >gi|121603713|ref|YP_981042.1| ABC transporter-like protein [Polaromonas naphthalenivorans CJ2] gi|120592682|gb|ABM36121.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 588 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 117/334 (35%), Gaps = 28/334 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L + + L+ V+ + + + + I +Y + GL ++ G GL S Sbjct: 2 LARRYGLWALIVVLVGVAVLPL------PDFWITQLNYIGLYSLVCLGLVLLTGVAGLTS 55 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 IGAYS L GLS WL + + ++ AC +I+ L +L+ G YL +AT+ Sbjct: 56 FGQAAFVGIGAYSTAWLTLNTGLSPWLTLFIGLGLTAACALILALLTLRMSGHYLPLATM 115 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ + I+ V + + Sbjct: 116 AWGLSLYYLMGNLDAL---------------GKYDGLLGIQGLTLLGWEVGQGRGFFALT 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + L+A I+ L + A R++R ++ + + K+ F +++ ++G Sbjct: 161 WTIVVLAALAIVQLLDSRAGRAMRSLRSGTLMAEAMGVSTLRYKIIIFLIAALLASLSGW 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 FA + ++P F I + + ++GG+ + + + + + + Sbjct: 221 LFAHFQRTVNPSPFGLKMGIEYLFMTVVGGVGHVWGALTGALLTKLLEDQLQVLLPQWLG 280 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + I L L++ L Sbjct: 281 T-------SGSYEIIVFGIVLVLMLKFLPDGLWS 307 >gi|209884043|ref|YP_002287900.1| ABC transporter related [Oligotropha carboxidovorans OM5] gi|209872239|gb|ACI92035.1| ABC transporter related [Oligotropha carboxidovorans OM5] Length = 613 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 117/333 (35%), Gaps = 24/333 (7%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K L L+L F+ + + +IL++ +F G I+ G GLLS Sbjct: 3 KQRPYLVETLTAIGLILAPFILPHLG--FAPNTVNRILVWGLFGIGFDILFGFTGLLSFG 60 Query: 70 CVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 Y G + +L + + + + + A G ++GL +L+ G Y A+ T+ Sbjct: 61 QSALYGTGGFVAAYLLTIAGFPHVVTALFIGMIAAAAVGYLVGLIALRSTGIYFAMITVA 120 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 ++E+F + G +L + +Y L Sbjct: 121 IAEVFFFVEFNPLSEWTGGENGLPGVPSPSFDLGFTTLHFTSGWS---------LYGFLA 171 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 F+ L + R+ + R IRDN ++ + KL+AF +++A+ G AG Sbjct: 172 FWYFIGIVAALRIVRSPVGAVLRAIRDNPLRAVAVGHNVHGYKLTAFVIAAAYAGFAGGL 231 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + + PD F F + ++ + +GG +L + + + + Sbjct: 232 LGVMQAFMPPDAFMFHTSAELVMMTAIGGTGTLFGPLLGAGVWLFLQDFLQA-------- 283 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + L++ ++ Sbjct: 284 ----ALGLGAAWKLVLGVIFVLLVCFLRRGIIG 312 >gi|152968876|ref|YP_001333985.1| high-affinity branched-chain amino acid transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893284|ref|YP_002918018.1| ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|262042362|ref|ZP_06015524.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150953725|gb|ABR75755.1| high-affinity branched-chain amino acid transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545600|dbj|BAH61951.1| ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040270|gb|EEW41379.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 349 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 70/353 (19%), Positives = 127/353 (35%), Gaps = 44/353 (12%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++ + L YI + I I+++ A +++ G G LSL A+G Sbjct: 15 LVIIVICIALLAGINVVFNDYIVRVISTIFIFMILAVSYNLINGVTGQLSLEPNGFVAVG 74 Query: 78 AYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 AY + + +S + + A + + +P + R Sbjct: 75 AYVTALLILSSDSKVDMFEMAAPSPWILSLHAGFLPALLISGLCAAALAVCLAVPVFRVR 134 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL I + + I ITNG G+ + Sbjct: 135 GDYLAIVTLGFGFIIKILAINNPQITNGAIGLNDIPQQPH-------------------- 174 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + + L+ +IL L + + IRD++ A ++ K AFA S Sbjct: 175 ----LLFWCGLFALLATGMILQLVWSKYGRMMKAIRDDEDAAIAMGVNTFRIKTCAFATS 230 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + F G+ G A+ ISP +F F ++ I++LGG+ S + T +++G E Sbjct: 231 AFFEGIGGGLLASLLTTISPGLFDFMLTFQLLIIIVLGGLGSTTGALLGTVLVVGSGEWL 290 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ ++ + + L +++L LL + R Sbjct: 291 RFLDQPLQFFGHDLG-AYPGLRMVVFSLLLLIIMLFAREGLLGKKEIWQTGRR 342 >gi|299536150|ref|ZP_07049464.1| ABC transporter permease protein [Lysinibacillus fusiformis ZC1] gi|298728425|gb|EFI68986.1| ABC transporter permease protein [Lysinibacillus fusiformis ZC1] Length = 338 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 120/327 (36%), Gaps = 31/327 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A L++F+ L + + + QI I+ + A I++G G++S + + IG Sbjct: 10 FAFFLLLVIFIILPFVNDSRTLLILLTQIFIFGILAMSYDILLGYTGIVSFGHAMFFGIG 69 Query: 78 AYSYVILGSRYGL---SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY+ ++ + L I + +++G ++GL +L+ + + A+ TL S +F Sbjct: 70 AYTTAVMLKQMDHTLLIFVLSIVIGMVLAGFISFLVGLLTLRLKSHFFAMLTLAFSGLFL 129 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + KW+ +T G G F Y+ +L + Sbjct: 130 VLAEKWRSVTYGNDGFTFRAPDLFRDRM-------------------TFYFFVLASLVVI 170 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + +R+N++ SL + K+ A V+ AG+ +A S Sbjct: 171 FLALYRFVNSPTGRILIAVRENEQRTKSLGFNTLHYKVIASVVAGIVASFAGSLYAVSLR 230 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++ + + + + I+GG+ +L +A++ G+ D Sbjct: 231 FVNTSVMAMDITLDALLMTIIGGVGTLVGPLLGSAVIEYAQHALSGLAR---------DY 281 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 R I L ++ ++ Sbjct: 282 PIFERWIIFFGILYILAVIFFPKGIIG 308 >gi|301061441|ref|ZP_07202211.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] gi|300444480|gb|EFK08475.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] Length = 366 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 125/339 (36%), Gaps = 13/339 (3%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L LFL + I + +QI+I+ I++G G+LS + + +GAY Sbjct: 28 ICLLALFLLVPFLFPSFKIVDLAVQIIIFGTLVASFDILLGYTGILSFGHGMFFGMGAYC 87 Query: 81 YVILGSRYGL----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 +YG+ ++ L +A+ +G +++ L +L+ + + A+ TL ++E+ + Sbjct: 88 MAFFMGKYGMPSYTNLVLGFAAAAVFAGIVALLISLLTLRVKAIFFAMITLAIAELAIVL 147 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 K +T G+ GI F + + YY + C + Sbjct: 148 ATKLSGLTGGEDGISFMSP-----GIFSVAFSLGDFMGIDINGKTITYYFIFFSCTVLFL 202 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 +L + + + IRDN + +L + + + G +A + + Sbjct: 203 AMLRFTHSPLGRVLQAIRDNSQRAEALGNRTFVYQSISITFGCIMAALIGGLYALWMEYV 262 Query: 257 SPDMF--KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +P+ + + V+ +VI+GGM +L A L + + Sbjct: 263 NPESSLGVMTIMLDVLLMVIIGGMGTLYGGIIGAAFLKITQTFLPDLQHLAKDLFPNALL 322 Query: 315 SFNMR--HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 N+ L + LV++ ++ +R Sbjct: 323 LHNILERWLLLFGVLFILVVIFFPKGVIGSIRERTARKR 361 >gi|261405484|ref|YP_003241725.1| urea ABC transporter permease UrtC [Paenibacillus sp. Y412MC10] gi|261281947|gb|ACX63918.1| urea ABC transporter, permease protein UrtC [Paenibacillus sp. Y412MC10] Length = 362 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 94/333 (28%), Gaps = 27/333 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 +LL + L + + + + L + A GL ++ G G+LSL + + +GAY+ Sbjct: 21 AVLLLMCLAPLFTTPFRLGLLTKFLALAILAVGLDLIWGYGGILSLGHGVFFGLGAYAMA 80 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLP-------------SLKFRGDYLAIATLIM 129 + L + + Sbjct: 81 MYLKLDASGSALPDFMGWSGVASLPWFWEPFRSFPAALILGMLLPALLALILGFFTFRNR 140 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 ++ + + F + +I +Y++ L Sbjct: 141 IVGVYFTILTQALVMIVVTLFVGKQEWTGGTNGLTGYSSILGFNLNAPSTKIGLYFITLA 200 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + + RD + L K AFAVS G+AG F Sbjct: 201 ALAGAYILCRRIVNSRVGQVLEASRDGENRVRFLGFDPSRYKTFAFAVSGGLAGLAGMLF 260 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 ISP M +I ++ V LGG +L +L + Sbjct: 261 VLQVGIISPSMMGIVPSIEMVLWVALGGRGTLIGAIIGAVLL--------------NAAK 306 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ ++ +V+++ L L Sbjct: 307 TGISEAYPEGWLLVLGALFVIVVVLMPKGLTGL 339 >gi|298291375|ref|YP_003693314.1| urea ABC transporter permease UrtC [Starkeya novella DSM 506] gi|296927886|gb|ADH88695.1| urea ABC transporter, permease protein UrtC [Starkeya novella DSM 506] Length = 388 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 105/353 (29%), Gaps = 34/353 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + +L AV+ P+L A Y+ S+ + L Y + A + ++ G +G+LSL Sbjct: 19 FLGVLLAAAVLVPVLNLATSPESAVHVPTYVVSLLGKYLTYALLALSVDLIWGYVGILSL 78 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +A+G Y+ + R + + LP + D A ++ Sbjct: 79 GHGAFFALGGYAMGMYLMRQIGTRGVYGDPVLPDFMVFLNWKELPWFWYGFDLFPFAAIM 138 Query: 129 MSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRF 169 + + + + + D + + Sbjct: 139 VLLAPGILALVFGWFAFRSRVTGVYLSIITQAMTFALLLAFFRNDMGFGGNNGLTDFKDI 198 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 F ++ + L + +L R+ IRD + Sbjct: 199 LGFNIQSDGTRAVLFVLSALALGLGYVLCRFLVRSHFGKVLIAIRDAETRVRFTGYRAEN 258 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL AF VS+ G+AGA + I+P F + +I +I V +GG +L A Sbjct: 259 YKLVAFVVSAMLAGIAGALYVPQVGIINPSEFSPANSIEIIVWVAVGGRGTLVGAALGAV 318 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ ++ V L ++ Sbjct: 319 LVNYAKTYFTS-------------GFLAPYWLFMLGGLFVAVTLFLPKGIVGT 358 >gi|261855701|ref|YP_003262984.1| urea ABC transporter permease [Halothiobacillus neapolitanus c2] gi|261836170|gb|ACX95937.1| urea ABC transporter, permease protein UrtC [Halothiobacillus neapolitanus c2] Length = 383 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 98/350 (28%), Gaps = 33/350 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +L LL V L Y ++ + L Y + A + ++ G G+LSL Sbjct: 20 AIVLMLLWVSIGNLAVPASSPWHVSTYTVTILGKFLTYALLAVSIDLIWGYAGILSLGHG 79 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM-- 129 +A+G Y+ + R LP + D+ A L++ Sbjct: 80 AFFALGGYAMGMYLMREIGDRGQYGNPDLPDFMVFLNWHELPWYWYGFDHFWFAALMVLL 139 Query: 130 -----------------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 +I + + + + F Sbjct: 140 VPGILAGLFGWLAFRSKVSGVYFAIITQALTYALMLAFFRNEMGFGGNNGLTDFKDILGF 199 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 P + + ++ L I + R+ IRD + + + KL Sbjct: 200 PIAENGTRVGLFVASGIALILGYFIAQAIVRSRFGRVLVAIRDAEPRTRACGYPVARYKL 259 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 F +S+ +AGA + I+P F +I ++ V GG SL + Sbjct: 260 VVFVISAMLAAVAGALYVPQVGIINPGEFSPLSSIEAVAWVATGGRGSLFGPIIGAFAVN 319 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + ++ LV + L+ L Sbjct: 320 YSKTQLTSLAPDLWP--------------FVLGGLFILVTVFLPKGLISL 355 >gi|160896604|ref|YP_001562186.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160362188|gb|ABX33801.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 354 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 78/327 (23%), Positives = 133/327 (40%), Gaps = 17/327 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 V + FL + + S ++ I LI + A GL+I+VG G +SL A+G Sbjct: 28 AIVALLAVAFLVIPFSVSDYTFQAVLIPFLIMSLAALGLNILVGYCGQISLGTGAFMAVG 87 Query: 78 AYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY+ L R+ L + +++ G+I GLPSL+ RG YLA+ATL + Sbjct: 88 AYAAYNLQVRFEGMPLLVALIGGGVLAMVFGVIFGLPSLRIRGLYLAVATLAAQFFVDWL 147 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + +TN + V+ + Y + LG+ + Sbjct: 148 ASRAAWVTNNSSSGSVSAGPLSIMGWKIDTPMEK-------------YLLCLGILCVLGL 194 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDR 255 L R AI W +RD A + +AKLSAFAVSS +G+AGA + Sbjct: 195 AAKNLVRGAIGREWMAMRDMDVAASVIGIRPTYAKLSAFAVSSFIVGVAGALWGFVHLGA 254 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P F ++ ++ ++I+GG+ S+ A + + L + ++ L + Sbjct: 255 WEPAAFSLDRSLQLLFMIIIGGLGSVVGSIFGAAFFVLLPLLLTQV--PHWMGLPLSTAT 312 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + + +++ H L +L Sbjct: 313 ATYLEHMIFGALIVFFLIVEPHGLAKL 339 >gi|169334652|ref|ZP_02861845.1| hypothetical protein ANASTE_01055 [Anaerofustis stercorihominis DSM 17244] gi|169257390|gb|EDS71356.1| hypothetical protein ANASTE_01055 [Anaerofustis stercorihominis DSM 17244] Length = 335 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 137/323 (42%), Gaps = 42/323 (13%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L+ + +++ L + + +++ +++ I ++ GL+++ G G SL A Sbjct: 22 LLIFIAAYVIIKLLIVVGIISPFYETVVLKLCIDIILGLGLNLITGITGQFSLGHAGFMA 81 Query: 76 IGAYSYVILG---SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 IGAY+ ++ S + I L + + ++SG G ++G+P+L+ RGDYLAIATL + EI Sbjct: 82 IGAYTSALMTLRISSSPVMIILAVILGGILSGFLGFLIGIPTLRLRGDYLAIATLGLGEI 141 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + ++ G I + Sbjct: 142 IKIVIQNVDQTILG------------------------GAAGLSSIPLYSSFEFCFICMV 177 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I + +++ A ++R+++ A S+ + AK+ AF + + F G+AGA ++ Sbjct: 178 ICYFVITNVLKSSFGRACISVREDEIASESMGVNVTKAKILAFIIGTFFAGVAGALYSGY 237 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I P F F ++I ++ IV+LGG+ +++ A IL V Sbjct: 238 VGVIQPKNFGFMKSIDILMIVVLGGLGNINGTIIAAFILNIVSFALQDFAE--------- 288 Query: 313 DCSFNMRHTTLMVIALFLVILMR 335 L + L ++L++ Sbjct: 289 ------LRMILYSLLLIAIMLIK 305 >gi|331002335|ref|ZP_08325853.1| hypothetical protein HMPREF0491_00715 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410151|gb|EGG89585.1| hypothetical protein HMPREF0491_00715 [Lachnospiraceae oral taxon 107 str. F0167] Length = 319 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 81/332 (24%), Positives = 144/332 (43%), Gaps = 43/332 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 LNK + ++ +F + + + S+ + I + +M A L++V G LG LS Sbjct: 4 LNKKTIFNIAIMLLAYAAVFALINSGILSRQYKSLIVPICVNIMLAVSLNLVTGFLGELS 63 Query: 68 LNCVIAYAIGAYSYVILGSRYGL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 L +IGAY ++ G S + +++ G ++G+P L+ RGDYL Sbjct: 64 LGHAGFMSIGAYISALISINTGFLPPALSFLTALICGGIMAAVFGFLIGVPVLRLRGDYL 123 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 AI TL EI +++ I + IT G G+ V + Sbjct: 124 AIVTLAFGEIIKSV-INYLDITGGSKGLSKIP----------------------VYSDYN 160 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 + V+ + + +I L + A ++IRDN A S+ I K+SAF +++ F Sbjct: 161 NFTVVFIIMVICIVLISNLINSRDGRAIKSIRDNDIAAESIGIKISKYKVSAFVIAAGFA 220 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AGA +A + I P++F ++++I ++ V+LGGM ++ + IL + E G Sbjct: 221 GLAGALYAHNVGIIKPNIFDYNKSIEILVFVVLGGMGNIPGSIISAIILTVLPEFLRG-- 278 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + L I L L+++ Sbjct: 279 -------------ADNLRMLLYAIVLILMMIF 297 >gi|88705928|ref|ZP_01103637.1| ABC transporter permease protein [Congregibacter litoralis KT71] gi|88699999|gb|EAQ97109.1| ABC transporter permease protein [Congregibacter litoralis KT71] Length = 529 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 88/289 (30%), Gaps = 21/289 (7%) Query: 53 AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112 A GL+I G +G++++ +GAY+ +L + + ++ + I+GL Sbjct: 254 AVGLAITFGVMGVINMAHGELIMLGAYTTWVLQQWLPGQPGVALLLAIPFAFLVSAIVGL 313 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 + +L L + +L + + + + Sbjct: 314 IIERGVIRFLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVLTPEWLAGSWE 367 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 ++ + +LL + A ++ +R T + R + N+ +L Sbjct: 368 ITAGLSLTYNRMAILLFSLLVFAGLLTLMRYTRLGLQVRAVAQNRAMARALGVRSSRVDA 427 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 FA+ S G+AG + + S I +V+ GG+ +L A L Sbjct: 428 LTFALGSGVAGVAGVALSQLTNV--GPNLGQSYIIDSFLVVVFGGVGNLWGTLVAAFSLG 485 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + ++ R L Sbjct: 486 VANKVIEPLAGAVLAKIVLLVFLILFLQR-------------RPQGLFP 521 >gi|158425701|ref|YP_001526993.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158332590|dbj|BAF90075.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 327 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 69/327 (21%), Positives = 129/327 (39%), Gaps = 24/327 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL + L L Y ++ I +L+Y + +I+ G G LSL + + I Sbjct: 15 LLLALVIFALVALLPFGVKDVYTLNVLILLLLYAGLSQSWNILGGYCGQLSLGHALYFGI 74 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L +++G+ W + + +I+ M +G + G Y IAT++++EI + Sbjct: 75 GAYTSTLLYTKFGVLPWFGMALGGVIAALIAMGIGHACFRLAGHYYVIATIVIAEIGLLL 134 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 W R + F ++ +Y +L + Sbjct: 135 FHNWDWAGAATGIELPIGRDSW-------------LTFQFARDKLPYFYFVLVFAAVVWL 181 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + + WR ++DN +A SL + +K+ A AVS+ F + G+F+A I Sbjct: 182 VTWKIENSKWGYWWRAVKDNPEAAESLGVVVFNSKMMAAAVSAFFTAVGGSFYAQFLGYI 241 Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P+ F ++++ +LGG+ +L AILI + EL + Sbjct: 242 DPESVMTFQFSLLMALPAVLGGIGTLWGPVLGAAILIPLTELTRTYMGGSGKGI------ 295 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + L R L+ L Sbjct: 296 ----DLIVYGCLIMAIALARPDGLVGL 318 >gi|226304846|ref|YP_002764804.1| branched-chain amino acid ABC transporter permease/ATP-binding protein [Rhodococcus erythropolis PR4] gi|226183961|dbj|BAH32065.1| putative branched-chain amino acid ABC transporter permease/ATP-binding protein [Rhodococcus erythropolis PR4] Length = 616 Score = 97.2 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 111/275 (40%), Gaps = 15/275 (5%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 I + GL++ +G G L+L YA GAY+ ++ I + + + ++ Sbjct: 42 LACILALVVSGLNLSLGFAGELALGQAAMYAAGAYTAGLMSQAGHTDILVQLAAAGAVAL 101 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 G++ G+P L+ LA+ + + + ++L + T G+ G+ + G+ + Sbjct: 102 GVGILTGVPGLRLGNWSLAMTSFFLVLLVPDVLAIFGGKTGGRNGLTGMEPPTLFGSELD 161 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + Y V++ + L +++ L + A+RT++ + S Sbjct: 162 TQQY---------------YMVVVVVTVLWFAVMRNLVVSRHGIAFRTLKQSPVLASSQG 206 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 ++ KL +A+ + G+AGA FA + ISP+ F F+ V++ ILGG S+ Sbjct: 207 VSVFRMKLLGYAIGAFPAGLAGALFANTDLFISPEAFGFTFATAVLAASILGGAASVYGA 266 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 AI+ Y F + Sbjct: 267 VVGAAIMQLGPNQSTAFQEYSLIFYGGFLIIGGVL 301 >gi|152980537|ref|YP_001353497.1| ABC-type branched-chain amino acid transport system permease protein [Janthinobacterium sp. Marseille] gi|151280614|gb|ABR89024.1| ABC-type branched-chain amino acid transport system permease protein [Janthinobacterium sp. Marseille] Length = 538 Score = 97.2 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 87/291 (29%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ + + I +++ I+ Sbjct: 265 ITFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPEAIDAYLLVALPAAFIVAAAVGIA 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ + S + + Sbjct: 325 LER--LVIRWLYGRPLETLLCTWGISLILMQGVRSIFGAQNVEVANPSWMSGGVTVLGSL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ ++ L L +T + R + N++ + + + F + Sbjct: 383 VLSYNRIVIIFFALFVVLAVWLILNKTRLGLFVRAVMQNRRMAACVGVSTGKIDMMTFGL 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 G+ G A S+ + +V+LGG+ L+ A L V + Sbjct: 443 GCGIAGLGGV--ALSQLGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVIAAFGLGEVNKF 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + +++ + + I R L L+ S Sbjct: 501 LEPVAGAVLAK-------------IAILVFIIIFIQKRPQGLFALKGRSVE 538 >gi|330826792|ref|YP_004390095.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|329312164|gb|AEB86579.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 345 Score = 97.2 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 17/322 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + L L + Y M + I V + GL+I+ G GL+SL +GA Sbjct: 24 AWLIIAAALLLLFPFAASDYWLYMACLVAINVASSTGLNILTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL +R G L + +++ G+++G+PSL+ +G YLAIAT+ S I + Sbjct: 84 YTVAILQTRLGTPFLLNLLAGGVVAMLGGIVVGIPSLRVKGLYLAIATIAASFIAHFLFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 ++ IT G AGI + R + +Y++++ + L Sbjct: 144 NFQ-ITGGTAGISMPPA---------------RLLGMDLDTSFRLYWLIVPVTLLMLLGA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT I A+ IRD + L ++ KL +F +SS + G+AG +A ++P Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGIAGGLWAYFFRVVTP 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F S +I ++ +I+GGM S+ + V EL + + Sbjct: 248 ESFPLSMSIFFLAAIIVGGMGSILGGILGAVFMTMVPELLKLIVD-LLPGGAALAVFLSP 306 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 + + ++ L Sbjct: 307 VRLIVFGALIIGFLVFEPLGLA 328 >gi|159045237|ref|YP_001534031.1| putative high-affinity branched-chain amino acid transport system [Dinoroseobacter shibae DFL 12] gi|157912997|gb|ABV94430.1| putative high-affinity branched-chain amino acid transport system [Dinoroseobacter shibae DFL 12] Length = 367 Score = 97.2 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 108/366 (29%), Gaps = 36/366 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKS---QKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 +++ I + + + + YI S+ + L Y + A L +V G G Sbjct: 5 VDRRMGIFLTGLFILTVAIPAGNLWMEGQPVPSYIVSLLGKYLCYALLAVALDLVWGYTG 64 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +LSL +A+G Y+ + R + LP + D Sbjct: 65 ILSLGHGAFFALGGYAMGMHLMREIGDRGVYANPELPDFMVFLNYQELPWFWYGFDQFWF 124 Query: 125 ATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRS 165 A L++ + + + + + + + Sbjct: 125 ACLMVLLVPGALAFVFGWFAFRSRVTGVYLSIITQAMTYALMLAFFRNEMGFGGNNGLTD 184 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 F ++ + I + ++ + +RD++ L Sbjct: 185 FKDVLGFDLQSDATRAGLFVLSALALTAGLLISKAITKSKLGQILVCVRDSEARTRFLGY 244 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + KL + VS+ G+AGA + I+P F + +I ++ V LGG +L A Sbjct: 245 RVERYKLFVWVVSAMMAGVAGALYTPQVGIINPGEFSPANSIEIVIWVALGGRGTLVGAA 304 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++ L G F + V + +L + Sbjct: 305 IGAILVAAAKTLLTGW--------------FPEIWLFALGALFIFVTIFMPKGVLGVVEN 350 Query: 346 SNFLER 351 + ++ Sbjct: 351 TLKRKK 356 >gi|319794133|ref|YP_004155773.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315596596|gb|ADU37662.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 370 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 75/328 (22%), Positives = 135/328 (41%), Gaps = 16/328 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V ++ F + T S D++ I L + A GL+++ G G LSL A+GA+ Sbjct: 17 LVVLVIAFGIVPFTASGYVFDALLIPFLALSLAAVGLNLLTGYAGQLSLGTAAFMAVGAF 76 Query: 80 SYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + R L+ I ++ + + A G++ GLPSL+ RG YLA++TL Q L Sbjct: 77 AAYNFNLRVDGLPLLVSIGLAGLAATAVGLVFGLPSLRLRGFYLAVSTLAAQFFVQWALT 136 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K+ +N A + + V + Y L + + + Sbjct: 137 KFSWFSNDNASGVIDAPALEVAGIVFD-------------TPVGRYIFSLSIVTVLTLLA 183 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRIS 257 L RT + + +RDN+ A + ++ KL AFAVSS +G+AG + + Sbjct: 184 WRLVRTQTGHHFIAVRDNELAARVIGVPVLRTKLLAFAVSSFIVGVAGVLWGFVYLRTVE 243 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + ++ IVI+GG+ ++ A+++ L + + F + Sbjct: 244 PAGFNLDRSFQILFIVIIGGLATIRGAFFGAALIVVFPLLLSRVGSFLFGGWFDSGV-LD 302 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345 M ++ + + M L+ L Sbjct: 303 MSQRIVLGALIIFFLAMEPQGLVALWDR 330 >gi|227523642|ref|ZP_03953691.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus hilgardii ATCC 8290] gi|227089214|gb|EEI24526.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus hilgardii ATCC 8290] Length = 319 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 85/340 (25%), Positives = 153/340 (45%), Gaps = 43/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 KY+ I ++ + L+ + +I++M + I I ++ A GL++++G G SL Sbjct: 6 KYNIIWLIIMISGFYLMNTLILIGVINAFIENMLVTIGINIILATGLNLIIGFAGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ +L I + ++S +I+G+P+L+ RGDYLAIAT+ Sbjct: 66 HAGFMAIGAYATAIITQTATTPAGFYLSIVIGIVVSILVALIVGIPTLRLRGDYLAIATM 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EI + I+I IT G AGI+ +L T + Sbjct: 126 GAAEIIR-IIINNMKITGGAAGIFNIPQLASWPT-------------------------V 159 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 M ++ II+ + A ++R+++ A ++ + KL+AF + +A +AG+ Sbjct: 160 YTMVCVTTIIIVNFIHSRGGRAVTSVREDEIAAEAMGINVFKWKLAAFTLGAATAAVAGS 219 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A+ ISP+ F E+I ++ IV+LGG+ S++ A A+L + + Sbjct: 220 LHASFLQTISPNDFGIMESISILIIVVLGGVGSITGTFVAAAVLGVLDTVLQ-------- 271 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F + AL L+++ + LL S Sbjct: 272 -------DFGALRMVIYAAALILIMIFKPSGLLGTWELSI 304 >gi|330006820|ref|ZP_08305707.1| branched-chain amino acid ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|328535734|gb|EGF62177.1| branched-chain amino acid ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 349 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 70/353 (19%), Positives = 127/353 (35%), Gaps = 44/353 (12%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++ + L YI + I I+++ A +++ G G LSL A+G Sbjct: 15 LVIIVICIALLAGINVVFNDYIVRVISTIFIFMILAVSYNLINGVTGQLSLEPNGFVAVG 74 Query: 78 AYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 AY + + +S + + A + + +P + R Sbjct: 75 AYVTALLILSSDSKVDMFEMAAPSPWILSLHAGFLPALLISGLCAAALAVCLAVPVFRVR 134 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 GDYLAI TL I + + I ITNG G+ + Sbjct: 135 GDYLAIVTLGFGFIIKILAINNPQITNGAIGLNDIPQQPH-------------------- 174 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + + L+ +IL L + + IRD++ A ++ K AFA S Sbjct: 175 ----LLFWCGLFALLATGMILQLVWSKYGRMMKAIRDDEDAAIAMGVNTFRIKTCAFATS 230 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + F G+ G A+ ISP +F F ++ I++LGG+ S + T +++G E Sbjct: 231 AFFEGIGGGLLASLLTTISPGLFDFMLTFQLLIIIVLGGLGSTTGALLGTVLVVGSGEWL 290 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ ++ + + L +++L LL + R Sbjct: 291 RFLDQPLQFFGHDLG-AYPGLRMVVFSLLLLIIMLFAREGLLGKKEIWQMGRR 342 >gi|316933050|ref|YP_004108032.1| urea ABC transporter permease UrtB [Rhodopseudomonas palustris DX-1] gi|315600764|gb|ADU43299.1| urea ABC transporter, permease protein UrtB [Rhodopseudomonas palustris DX-1] Length = 537 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S L S +I+ ++ Sbjct: 258 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQETIRTSYPALFDYSLLIAVPLAFLVA 317 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + ++ + + +L W + + S Sbjct: 318 GATGVLIER--SVIRFLYGRPLETLLATWGLSLILQQAVRTIFGPTNREVGNPSW-MSGA 374 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++L + ++ LR TA+ R + N++ S+ Sbjct: 375 FELGQITITYNRLWILCFTLAVFVLLLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 434 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 435 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 492 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + +++ + L I R L L+ + Sbjct: 493 GIANKFLEPFAGAVLAK-------------IAILVLIILFIQKRPRGLFALKGRAVE 536 >gi|183602257|ref|ZP_02963624.1| branched-chain amino acid transport system permease protein [Bifidobacterium animalis subsp. lactis HN019] gi|219682620|ref|YP_002469003.1| branched-chain amino acid transport system permease protein [Bifidobacterium animalis subsp. lactis AD011] gi|241190195|ref|YP_002967589.1| branched-chain amino acid transport system permease [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195601|ref|YP_002969156.1| branched-chain amino acid transport system permease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218471|gb|EDT89115.1| branched-chain amino acid transport system permease protein [Bifidobacterium animalis subsp. lactis HN019] gi|219620270|gb|ACL28427.1| branched-chain amino acid transport system permease protein [Bifidobacterium animalis subsp. lactis AD011] gi|240248587|gb|ACS45527.1| branched-chain amino acid transport system permease protein [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250155|gb|ACS47094.1| branched-chain amino acid transport system permease protein [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177905|gb|ADC85151.1| LivM [Bifidobacterium animalis subsp. lactis BB-12] gi|295793182|gb|ADG32717.1| branched-chain amino acid transport system permease protein [Bifidobacterium animalis subsp. lactis V9] Length = 327 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 123/310 (39%), Gaps = 8/310 (2%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 Y + A GL+I G GL+++ +GAY + I G ++ + + +++ Sbjct: 18 TTAAYALAAIGLNIHFGMSGLMNMGQAGFMLLGAYGFAI-TQMNGCDLFTSVLTALVLAA 76 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI--LIKWKPITNGKAGIYVADRLYFL--- 159 G+++G+P+LK DYLA+ TL +EI + + +T G AGI + Sbjct: 77 IYGILLGIPTLKLGPDYLAMVTLAAAEIIRIVGRSTSLTWLTGGSAGIAPQNFTEKFENA 136 Query: 160 -GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S ++ + ++ V + ++ + + + IR+++ Sbjct: 137 SPLPNGSTKFLLWTYNNNIANSWWLRIVAWVLVAIALLLCWRWFHSPWGRVLKGIREDEN 196 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A SL ++ K+ A + F +AG F ++PD + +I++LGG Sbjct: 197 AIRSLGKSVTKYKMQALILGGLFGAIAGIVFILP-RSLNPDSLGRTVTFYTWTILLLGGA 255 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ + +L ++ + + ++ +AL L+++ R Sbjct: 256 ATIMGPVLGSCVLWVLLTAVKETMRVTIPTTVVSSNQIEALGWVIVGVALMLLVIFRPQG 315 Query: 339 LLRLRTPSNF 348 +L + F Sbjct: 316 ILGNKKELAF 325 >gi|222112622|ref|YP_002554886.1| inner-membrane translocator [Acidovorax ebreus TPSY] gi|221732066|gb|ACM34886.1| inner-membrane translocator [Acidovorax ebreus TPSY] Length = 335 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 115/283 (40%), Gaps = 9/283 (3%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 LL + A S+ ++LI+ + A G ++++G GLLS I + +G+Y+ Sbjct: 7 FLLALAIVVAMPLCMQSGSLASEVLIFGLAAMGCNLLLGYTGLLSFGQGIFFGLGSYTIA 66 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L +R+ L + L + + + A I+G ++ RG Y + TL +++F + Sbjct: 67 LLLTRWTLPMPLALLAAVAMGAAGAAIVGWVAIHQRGTYFVMLTLAFAQMFYFLAYTATG 126 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ R + + Y + + + ++ + Sbjct: 127 LTGGDNGLLDIPRPS---------LAVAGQTLWPLDSPWQYYGFVAVLFLAAFWLLRRVC 177 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + +RDN++ ++ + KL AF +S A G+AGA A + Sbjct: 178 DSVFGRTLLAVRDNEERAAAVGYDLRLLKLQAFVISGAVTGLAGALHAMMTGIAPLSNAE 237 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 + + +++ + ++GG +L A + + + + + Sbjct: 238 YHTSEMILVMTVIGGTGNLLASVLGAAFYVLLGDWLSTLWPRW 280 >gi|148989830|ref|ZP_01821124.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|147924772|gb|EDK75856.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] Length = 318 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 G S + + + V ++SGA +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSKSPTYGAFFGAMLVGTLLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|170692049|ref|ZP_02883213.1| urea ABC transporter, permease protein UrtB [Burkholderia graminis C4D1M] gi|170143333|gb|EDT11497.1| urea ABC transporter, permease protein UrtB [Burkholderia graminis C4D1M] Length = 548 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 81/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + +++ + Sbjct: 274 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRFAPGAFDWYPLLAVPASFVAAALVGIV 333 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 334 IER--LVLKHLYGRPLETLLTTFGISLILIQATRMLFGAQNVQVVNPSWMSGGVTVLPNL 391 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L F+ L +T + R + N++ + AFA Sbjct: 392 ILPYNRLVILAFALFVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 451 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L V + Sbjct: 452 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKA 509 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 510 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 547 >gi|118589403|ref|ZP_01546809.1| inner-membrane translocator [Stappia aggregata IAM 12614] gi|118438103|gb|EAV44738.1| inner-membrane translocator [Stappia aggregata IAM 12614] Length = 412 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 51/368 (13%), Positives = 105/368 (28%), Gaps = 40/368 (10%) Query: 1 MSIFSLR-LNKYDKILCLLAVVYPLLLFLFL------GATKSQKYIDSMGIQILIYVMFA 53 MS F R ++ I + +L+ Y ++ + L Y + A Sbjct: 2 MSSFLFRAMDARAGIFLAIMAAVIVLVPAGNLLMPEGSTFHVPNYAVTLMGKYLTYALLA 61 Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113 + +V G G+LSL +A+G Y+ + R + + LP Sbjct: 62 LAVDLVWGYCGILSLGHAAFFALGGYAMGMYLMRQIGTRGVYGDPILPDFMVFLNWGELP 121 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVAD 154 + D A L++ + + + + D Sbjct: 122 WYWYGFDMFWFAALMVLLVPGVLAFVFGWFAFRSRVTGVYLSIITQALTYALLLAFFRND 181 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + + F ++ + I + R+ + +R Sbjct: 182 MGFGGNNGLTDFKDILGFDIQADTTRAGLFAASGLALVVCFLICRAITRSKLGKVLVAVR 241 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 D + L + KL + +S+ G+AGA + I+P F + +I V+ V Sbjct: 242 DAESRTRFLGYRVEHYKLFVWTLSAMMAGIAGALYVPQVGIINPGEFAPANSIEVVIWVA 301 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG +L ++ F + + +V L Sbjct: 302 VGGRGTLVGAVLGAVLVNFAKTW--------------FTAALPDIWLFALGGLFVVVTLF 347 Query: 335 RSHSLLRL 342 ++ Sbjct: 348 LPKGIVGT 355 >gi|319782099|ref|YP_004141575.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167987|gb|ADV11525.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 344 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 130/326 (39%), Gaps = 27/326 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + V L L Y + I IY + A + +G G+ + + + I Sbjct: 30 AIGFVLGFALLALLPLIFGDTYARHILIMAFIYAIVASNWDLSLGYGGVFNFGHLALFGI 89 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y+Y +L W+ + S +I+ +++ +P L+ +G Y+ + T +++ + Sbjct: 90 GVYAYSLLTKLAEFDPWIALFASGVIATLAAILVTIPILRLKGIYIILVTFGFAQLVMQV 149 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 +I IT G G+ LY + + +Y+ L + S Sbjct: 150 IISQSAITGGTQGLVRIPGLYVFDHNMVRDGKS------------AYFYIALALLVASTL 197 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + R+ + +RDN++ S +I+ ++ A S+ F G+AGAF+AA + Sbjct: 198 FLRVFVRSRTGASIVALRDNEEYAISRGVSIVRQRMLTLAASAFFTGIAGAFYAAYQRNA 257 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 S D+F S I++S+V+LGG +++ A+ +L E F Sbjct: 258 SIDVFGMSLATIILSMVLLGGTSTIYGAIIASFVLTIFAEWMA---------------DF 302 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 + + + V+L L+ + Sbjct: 303 GAWRPMITAVLIIGVMLAYPSGLVGM 328 >gi|90422199|ref|YP_530569.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90104213|gb|ABD86250.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 314 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 133/325 (40%), Gaps = 30/325 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ + L Y + + + A GL+I++G G +SL + IG Sbjct: 10 VILIVLAAVIALLPLAFPSSYYLRVAALVWVSAFAAIGLNILMGKAGQVSLGHAGFFGIG 69 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL +++GL + + A +S ++G P L+ +G YLAIATL + ++ Sbjct: 70 AYAVAILPAQFGLPSLAALLIGAALSALLAFLVGRPILRLKGHYLAIATLGFGVLVAMVI 129 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 T G G+ VA F S Y++ G+ + I Sbjct: 130 TTESQWTGGPDGMAVAKLSLFGWRASGSATW---------------YWITGGLLLIGTWI 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L T A+R + D++ A + KL AF +++ + +AG+ A I+ Sbjct: 175 ALNLDDTPTGRAFRALHDSEIAARVTGVDVNRFKLQAFVIAAVYGSIAGSALAMMNGFIN 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD F ++ ++++V+LGG+ S+ A+LI + ++ Y Sbjct: 235 PDQAGFLHSVELVTMVVLGGLGSVVGSIVGAAVLIVLPQMLTVFQDYEN----------- 283 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 ++ + L ++ ++ + Sbjct: 284 ----LMLGAIIILSMIFMRDGMVPM 304 >gi|319780304|ref|YP_004139780.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166192|gb|ADV09730.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 349 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 107/315 (33%), Gaps = 9/315 (2%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y + + I + + LS+ G G+ SL V GAY IL Sbjct: 26 PHVLSDYFVRIILLIALNAILVLALSLSNGFTGVFSLGHVGFIGAGAYISGILSIPVQQK 85 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + LL + + + + L + + + Sbjct: 86 MALLPHLPGFLHAFSLPFLPATLVAGVLTALLAVVVGYPLMRLSGYFVSVATMG------ 139 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + + + + ++G ++ ++ L + A + Sbjct: 140 --FLIIVNVVLINASDFTRGARTFTGVPLETTLPWVMGWLAITVFVLARLVYSPFGRAMK 197 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RD+ A ++ ++ +L AF + + F G+ G+ +A SP+ F F+ + +I+ Sbjct: 198 AVRDDTIAASAVGIGVLRTRLIAFVIGAFFSGVGGSLYAHYLGSFSPNTFYFALTMSLIT 257 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +++LGGM SL+ + + E+ + + F ++ LV Sbjct: 258 MLVLGGMGSLTGAVVGVICVSLLSEVLRSVERGFTIGDFAVPALFGASQ-IVLGFIFILV 316 Query: 332 ILMRSHSLLRLRTPS 346 ++ R ++ R + Sbjct: 317 MIFRPKGIMGDRELT 331 >gi|90419446|ref|ZP_01227356.1| putative ABC transporter permease protein [Aurantimonas manganoxydans SI85-9A1] gi|90336383|gb|EAS50124.1| putative ABC transporter permease protein [Aurantimonas manganoxydans SI85-9A1] Length = 339 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 124/337 (36%), Gaps = 29/337 (8%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 RL+ L + L L L +++ +I+I+ + A L +++G Sbjct: 21 PSRLDGRGTALAAGLIFVTLALLPLLATAIDDQFLLVTATRIMIFALAALSLDLILGYGA 80 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L+S +GAYS IL + I + V+ ++ + G SL+ +G Y + Sbjct: 81 LVSFGHAAFIGLGAYSVAILAAHGIDDILVQAAVAILVCSLFAFVTGAISLRTKGVYFIM 140 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL ++ ++ + R F + + + + Sbjct: 141 ITLAFGQMAYFFMVSLSAYGG--------------DDGITLAARSTLFGAPVLKGNLTFF 186 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 YV+L L+ + + + R RDN+ ++ +L+A+ ++ A G+ Sbjct: 187 YVVLAALALAFVALRAVVGSRFGRVLRGTRDNRVRMQAIGFAPFPYQLTAYVIAGAIAGL 246 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG F A + +SP + + +I +V+LGGM +L + + + ++ + Sbjct: 247 AGVFLANQAEFVSPAYMSWQRSGELIVMVVLGGMGTLVGPIAGAVAFLLLEDWLAQISEH 306 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + I L L++L + Sbjct: 307 WKLG---------------LGIFLVLLVLFTRGGIAG 328 >gi|91789902|ref|YP_550854.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91699127|gb|ABE45956.1| amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 632 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 123/306 (40%), Gaps = 33/306 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ + I +L+ V+FA L ++G G+ S + +GAY +L L + + Sbjct: 343 SPYVTVLLIDLLVAVLFAASLHFIMGPAGMHSFGHAAYFGLGAYGAALLVRSLNLPMEVA 402 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + V+ ++ + G ++ G YLA+ TL ++I I +W T G G+ Sbjct: 403 LLVAPALAALGAFVYGWFCVRLSGVYLAMLTLAFAQITWAICYQWDAFTGGSNGLTGV-- 460 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 +P+ ++ + YY+ L + ++ + + A R RD Sbjct: 461 ----------------WPAGWLADKRIYYYLTLVLVVGGVLLMHRMLYSPFGYAMRAARD 504 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + ++ + + AF ++ +F G+AGA +A S+ ISP+ ++I + +V+L Sbjct: 505 SVLRSDAIGINVKRMQWVAFVMAGSFAGLAGALYAFSKGSISPESLHVGKSIDGLVMVLL 564 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ +L + + Y+ ++ + +++L+ Sbjct: 565 GGVQTLLGPVVGAVTFTWLHDTVARNTDYWRA---------------MLGAIILMLVLLF 609 Query: 336 SHSLLR 341 + Sbjct: 610 PQGIAG 615 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 94/303 (31%), Gaps = 13/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + A GLS++ G +++ + +G Y L + G ++ + Sbjct: 10 LLNGLAGASSLFLVAAGLSLIFGVTRIVNFAHGSFFMVGIYVAYSLVATLGSTLGFWPAL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + L R Y A + F L+ + + Sbjct: 70 LLAALAVGVLGALVEVLLLRRIYHAPELFQLLATFALGLVIKDGV--------LWFWGAE 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R+ + + ++++ + + L L +T R +++ Sbjct: 122 ELLGPRAPGLTGSVSILGRQFPSYDLFLIVAGPVVLGLLWLLLTKTRWGTLVRAATQDRE 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L + + FA+ + G+ GA + +V++GGM Sbjct: 182 MVSALGVNQAWLFTAVFALGALLAGLGGALQLPREPA--NLEMDLNIIGAAFVVVVVGGM 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A ++ + +C + + SF+ + + + V++ R Sbjct: 240 GSLPGAYVAALLIAELKAICIWLG---LVEIAGISISFSKLTLVVEFLVMAAVLVARPWG 296 Query: 339 LLR 341 L Sbjct: 297 LFG 299 >gi|55380262|ref|YP_138111.1| branched-chain amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] gi|55232987|gb|AAV48405.1| branched-chain amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 674 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 120/326 (36%), Gaps = 18/326 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L L +Y + +ILI+ +FA L IV+G GL+ L + Y +GA Sbjct: 334 VAVVALALAPVAILLMGNQYYLVVLNEILIWAIFALSLDIVMGYAGLVPLGHTMFYGVGA 393 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ ++ Y S+++++ + ++ I+G S++ G Y A+ TL +E+ + + Sbjct: 394 YTAALVMLHYSQSVFVVLLGAILLCAILAWIVGSLSIRVSGVYFAMITLAFAELLYSAVF 453 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K+ + + F + + YY+ L + LS Sbjct: 454 KFDFTGGSDGLLGFEAFIGLGSLGASLSNIEFGLLGYEIGQQFVFYYLALLIAVLSFLFA 513 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI-- 256 + + ++IR++++ + + K AF +S G+AG A S + Sbjct: 514 RRMMNAPFGSVLQSIRESEERAEFIGYDVNRYKRRAFVISGGMAGLAGGLLAVSPSTVIV 573 Query: 257 -SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + + VI I + GGM +L + + G E + Sbjct: 574 SPDQTLNWIHSGEVIVIALFGGMGTLYGPMIGSGVFFGAEEFLSSYTDQW---------- 623 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 ++ L +L ++ Sbjct: 624 -----RLIIGTMFILFVLFVPRGIVS 644 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 111/307 (36%), Gaps = 14/307 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG--LSIWLLI 96 + + ++YV+ A GLS++ G + +++ + +A+GAY + + + +G W+ I Sbjct: 10 LLNGLTLGMVYVLLAAGLSVIFGVMDVINFSHGELFALGAYFALSIIAPFGAGTGFWIAI 69 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V+ ++ G G + +++ + ++++ ++ + G +A Sbjct: 70 VVAPVVVGLIGAAIERTTVRPLYGRDPLYHILLTFGLVLVINDAIRLIWGTQQRQLAVPE 129 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 Y V ++ Y++++ L+ L RT R + Sbjct: 130 YLSQP----------ISILGVQVSVYNYFMIVFAALLAVVTWYLLNRTKYGMIIRAGSQD 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ ++ I F V +A +AG ++ S I +V+LG Sbjct: 180 REMVRNVGIDIDQYYTLVFGVGAALAAVAGIVLGGYQNV--NTGMGNSVIIPAFVVVVLG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S ++ V L + + + + + + V+L++ Sbjct: 238 GLGSFRGAVFGGLLVGVVQTLMRAYSGTVLATFGDTTLTVPNLEGLTVYLLMIAVLLVKP 297 Query: 337 HSLLRLR 343 L R Sbjct: 298 QGLFGTR 304 >gi|326793437|ref|YP_004311257.1| urea ABC transporter permease [Marinomonas mediterranea MMB-1] gi|326544201|gb|ADZ89421.1| urea ABC transporter, permease protein UrtB [Marinomonas mediterranea MMB-1] Length = 538 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 99/297 (33%), Gaps = 21/297 (7%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 + GL+I G +G++++ +GAY+ ++ I I V+ + +MG Sbjct: 263 ASIGLAITFGVMGVINMAHGEMIMLGAYTTYVVQLMMPNHIDYSIWVAIPAAFLVSGLMG 322 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + + + +L + + + + S + Sbjct: 323 VLIERL------VICRLHGRPLETLLATFGISLILQQLVRTIFSPLNRQVSTPSWMSGSL 376 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + + + Y+L + +++L L+++++ R + N+ ++ + Sbjct: 377 EINPVLSLTLNRLYILAFALLVFMALVLLLKKSSLGLNVRAVSQNRNMAKAMGVKTEWVD 436 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG + + S I +V+ GG+ +L A L Sbjct: 437 AMTFGLGSGIAGIAGVALSQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLMGTLVAAFTL 494 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + + L+++ + L I R L + + Sbjct: 495 GIANKFLE-------------PTTGAVLAAILVLVFIILFIQKRPKGLFPQKGRAAE 538 >gi|240140234|ref|YP_002964712.1| putative branched-chain amino acid transport system permease protein [Methylobacterium extorquens AM1] gi|240010209|gb|ACS41435.1| putative branched-chain amino acid transport system permease protein [Methylobacterium extorquens AM1] Length = 347 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 16/318 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILG 85 F+ + T + + +++ I LI + GL++ +G G SL A+GAY+ +L Sbjct: 35 FVAIPLTATDYWYNAILIPFLIMALAGLGLNLTMGYGGQASLGTGAFMAVGAYATYNLLL 94 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 L + + + +I+GA G+++GLPSL+ +G YL TL + + + + +N Sbjct: 95 RLPELPLPVSLAGGGLIAGAVGLVVGLPSLRIKGFYLIAPTLAAQFLIEWVFNQVGWFSN 154 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 + ++ + Y + L + + L + Sbjct: 155 YASSSAISAPRLVFLGY-------------DLSSPAGRYALTLTSVTVVTVLAWRLVGSQ 201 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFS 264 WR +RD + A + + AKLSAF V +A G+AGA +A A + F Sbjct: 202 TGRNWRAVRDGETAAAVIGVPVARAKLSAFFVGAAVSGVAGALWAFAYLGTVDARSFDLD 261 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + + I+I+GG++SLS A ++ L ++ + L + L Sbjct: 262 RSFQAMFIIIIGGLSSLSGSFIGAAFIVLTPILLTHLSNAFLGGSLD-GGQLSNLQRILF 320 Query: 325 VIALFLVILMRSHSLLRL 342 + ++ + L L Sbjct: 321 GALIIGFLIKEPNGLAAL 338 >gi|254488702|ref|ZP_05101907.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] gi|214045571|gb|EEB86209.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] Length = 644 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 102/311 (32%), Gaps = 26/311 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---ILGSRYGLSIWLLI 96 IY + A GL+I G +G++++ +GAY+ + Y +SI + + Sbjct: 355 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFVPDYTVSIIVAL 414 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ I+ A G++M + + + TL+ + L + G + Sbjct: 415 PLAFAITFAAGVVMERLVI-RHLYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSPA 473 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + S + + + I+ L+RT + R + N Sbjct: 474 ---------WLDGALVFSDVIQISYIRIAIFVLALLFLGLILFVLKRTRLGLEVRAVTQN 524 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 S+ + F + S G+AG S + + +V Sbjct: 525 PGMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLYAKVTSEMGADYIVQSFMTVVVGG- 583 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 + ++ +++ + + F+ S + T MV+ + L I R Sbjct: 584 -VGNVWGTLAGASLIGFLQ-----------KGIEWFNPSNTLAAQTYMVLFIILFIQFRP 631 Query: 337 HSLLRLRTPSN 347 ++ + + Sbjct: 632 KGIVAQKGRAA 642 >gi|299533769|ref|ZP_07047140.1| High-affinity branched-chain amino acidtransport system permease protein livM [Comamonas testosteroni S44] gi|298718185|gb|EFI59171.1| High-affinity branched-chain amino acidtransport system permease protein livM [Comamonas testosteroni S44] Length = 641 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 121/307 (39%), Gaps = 33/307 (10%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 Y + I + +FA L ++G G+ S + +GAY +L L + Sbjct: 345 GGSYATVLLADIFVAALFASSLHFILGPGGMHSFGHAAYFGLGAYGAALLVRTLDLPMEA 404 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 + + + + A ++ G ++ G YL + TL ++I I+ +W T G G+ Sbjct: 405 ALLLGPLAAAAGALLYGWFCVRLSGVYLTMLTLAFAQISWAIVFQWDDFTGGSNGLTGVW 464 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + Y++ LG+C L ++ L + + A R R Sbjct: 465 PPDW------------------ASQGPAFYWLALGICALGIYLLRRLLFSPLGYALRASR 506 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 D+ ++ + + +AF ++ F G+AGA FA S+ ++PD ++++ + +V+ Sbjct: 507 DSALRADAIGIDVRRIQWTAFVIAGLFAGLAGALFAFSKGGVAPDTMSVTKSVDALVMVL 566 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 LGG+ +L+ A + + Y+ LM + +++L+ Sbjct: 567 LGGVQTLAGPVVGAAAFTWLHDTVARNTEYWRA---------------LMGATMLILVLL 611 Query: 335 RSHSLLR 341 + Sbjct: 612 APQGIAG 618 Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 98/305 (32%), Gaps = 17/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96 + + + + GLS++ G ++ Y +GA+ + + W + Sbjct: 10 LLNGLASASSLFLVSVGLSLIFGVTRTINFAHGSFYMLGAFIAYSSVDLLSPHIGFWPAL 69 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + GA G + L+ + L+ + ++ G Sbjct: 70 LLAPLACGALGALTETLLLRRIYKAPELFQLLATFALVLVIKDAALWLWGP--------- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 R+ + + +++ + + L L RT R + Sbjct: 121 -EELFGPRATGLEGSVEILGRQFPTYDLFLIAVGPCVLLGLTLLLTRTRFGTLVRAATQD 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + + FA+ + G+ GA +V++G Sbjct: 180 REMVGALGVNQAWLFTAVFALGTLLAGLGGALQLPREPA--SLEMDMLTIGAAFVVVVVG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM S+ A ++ + +C + + F+ SF+ + + + +V++ R Sbjct: 238 GMGSIPGAFIAALLVAELKAVCIWLG---VQEIAGFELSFSKLTLVVEFLVMAVVLIWRP 294 Query: 337 HSLLR 341 LL Sbjct: 295 WGLLG 299 >gi|118468073|ref|YP_885611.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118169360|gb|ABK70256.1| ABC-type transport system permease protein II [Mycobacterium smegmatis str. MC2 155] Length = 335 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 115/315 (36%), Gaps = 36/315 (11%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS-RY 88 L + Y + + ++ A +++ G G +S V + IGAY+ IL ++ Sbjct: 27 LLPLMTSPYYVRVATGVALWAGIALSWNVICGYAGYISFGHVAFFGIGAYTTAILMQPQH 86 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 W +PV+A+++GA ++G P+L+ +G Y AIAT ++E + L T G Sbjct: 87 DWDFWATLPVAAVVAGAVAALVGWPALRLKGAYFAIATWALAEAVRE-LTTVVKFTGGSG 145 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ R F Y +L A L L R+ Sbjct: 146 GLSTPIRADD---------------------NFFFYTMLGASAIAYAVCYLLLERSKFGF 184 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-KFSENI 267 + +RDN+ A + K+ AF +S+ + G A I+P Sbjct: 185 KVKAVRDNEIAARAQGINTNLVKIQAFVLSAVIPAVLGGINAYWITFINPQSVLNTLITD 244 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ +V++GG+ A + + E + ++ Sbjct: 245 QLVVMVLVGGLGHAWGPALGATAMFLLQEQLR------------VSYGETTAYIIIVGAI 292 Query: 328 LFLVILMRSHSLLRL 342 + L++L L+ L Sbjct: 293 VMLIVLFLPDGLVSL 307 >gi|163852906|ref|YP_001640949.1| inner-membrane translocator [Methylobacterium extorquens PA1] gi|163664511|gb|ABY31878.1| inner-membrane translocator [Methylobacterium extorquens PA1] Length = 347 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 127/315 (40%), Gaps = 16/315 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88 + T + + +++ I LI + GL++ +G G SL A+GAY+ +L Sbjct: 38 IPLTATDYWYNAILIPFLIMALAGLGLNLTMGYAGQASLGTGAFMAVGAYATYNLLLRLP 97 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L + + + +I+GA G+++GLPSL+ +G YL TL + + + + +N + Sbjct: 98 ELPLPVSLAGGGLIAGAVGLVVGLPSLRIKGFYLIAPTLAAQFLIEWVFNQVGWFSNYAS 157 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 ++ + Y + L + + L + Sbjct: 158 SSAISAPRLVFLGY-------------DLSSPAGRYALTLTSVTVVTVLAWRLVGSQTGR 204 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENI 267 WR +RD + A + + AKLSAF V +A G+AGA +A A + F + Sbjct: 205 NWRAVRDGETAAAVIGVPVARAKLSAFFVGAAVSGVAGALWAFAYLGTVDARSFDLDRSF 264 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + I+I+GG++SLS A ++ L ++ + L + L Sbjct: 265 QAMFIIIIGGLSSLSGSFIGAAFIVLTPILLTHLSNAFLGGSLD-GGQLSNLQRILFGAL 323 Query: 328 LFLVILMRSHSLLRL 342 + ++ + L L Sbjct: 324 IIGFLIKEPNGLAAL 338 >gi|194289186|ref|YP_002005093.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis LMG 19424] gi|193223021|emb|CAQ69026.1| putative Branched-chain amino acid ABC TRANSPORTER, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 547 Score = 96.9 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 80/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ S + + + Sbjct: 273 ITYGLIGVINMAHGEFLMIGAYATYVVQSLFRAHAPGAFDWYLPAALPASFLAAALVGFV 332 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + + + Sbjct: 333 LER--LVLRHLYGRPLETLLATFGISLLLMQAVRTLFGAQNVEVANPAWMSGGFEWMPGL 390 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++L + A L RT + R N+ + AFA Sbjct: 391 VIPYNRVVIILFALAVVAVAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWQVDSYAFAF 450 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I +V+LGG+ L+ L + + Sbjct: 451 GAGIAGLGGC--ALSQIGNVGPDLGQAYIIDSFMVVVLGGVGQLAGTIVGAFGLGILNKF 508 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 L+++ + L I R L L+ S Sbjct: 509 IEPFYGAVLAK-------------ILVLVLIVLFIQKRPQGLFALKGRSAE 546 >gi|13094153|dbj|BAB32742.1| putative ABC transporter subunit [Pseudomonas resinovorans] Length = 571 Score = 96.9 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 111/285 (38%), Gaps = 4/285 (1%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++L L + L L + + ++ S+ ++ IY M A L +++G ++S Sbjct: 281 RRVLIDLLCLATFALLPLLASLLHEPFLVSLFTRLAIYGMAAASLDLLIGYGAMISFGHA 340 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + +G Y ++G ++ L + + + L F ++ Sbjct: 341 AFFGLGGYVVGVIGFHTSQALPLWGWDGSNSALLVWPLSLLVCALFAVVVGYLSLRTSGV 400 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F I + + ++ + G L P + + YY+ LG+ Sbjct: 401 QFIMITLAF----GQMLYFVLSSLSLYGGDDGILLSERNTLPGIDLDNPVQFYYLCLGLL 456 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L + R ++ +++ SL + +L AF ++ G+AG +A Sbjct: 457 VAWLLFCRRLVNSRFGYVLRGLKQSERRSISLGLHPLRYRLGAFVIAGVGGGLAGILWAN 516 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +SPDM + ++ ++++VILGG+ +L A+ +G+ + Sbjct: 517 YAMFVSPDMGAWHKSGELMAMVILGGVGTLLGPVLGAAVYLGLEQ 561 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 80/284 (28%), Gaps = 15/284 (5%) Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 +G+++L Y +GA+ + P + Sbjct: 1 MGVINLAHGAFYMVGAF----------CRPTPRPERLVLARRVGSGSSARPYTRCLSKPA 50 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 + A + + I V F ++Y + Sbjct: 51 SCAASTTAITSTRYWPTLAVVFFTNELITVLFGRSPPAMPTPEWYSSFVEVLPGLMYPVS 110 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 + ++ ++ L + T + R D+ + +L I F S Sbjct: 111 RLLFIAAGAVVAIAMWLLINHTRLGMLIRAGADDHEMVGALGVNIARLYTLVFVFGSVLC 170 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AG A I ++++GG+ S+ ++ V L Sbjct: 171 GLAGFMAAPLLSV--EIGMGEKVLITTFVVIVVGGVGSVRGALAGALLIGMVDGLGRAYI 228 Query: 303 FYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMRSHSLLRLR 343 + LL + S + + I + +V+L+R LL R Sbjct: 229 PQLLDQLLPAEVSGTLSGGLISASAYIVMAVVLLVRPRGLLPAR 272 >gi|269121036|ref|YP_003309213.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386] gi|268614914|gb|ACZ09282.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386] Length = 300 Score = 96.9 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 100/303 (33%), Gaps = 20/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ +GAY+ ++Y + + I V Sbjct: 11 VINGLQVGSIYALIALGYTMVYGIVKLINFAHGDILMVGAYTAFTCVTKYNMPLIAAILV 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S M+ G+++ + K + I+ LI + L + G + Sbjct: 71 SVMVCSLLGVLIDRLAYKPLRNSPRISALITAIGVSFFLESVFLVFQGADSKVIPQDKIP 130 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + + +++ T + A R + ++ Sbjct: 131 FYLSSAT------ISIGSLKVSYLTLVTIFSTIICMLVLNFFIKNTKLGKATRAVSEDHN 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA + G ++ + +I P M + + GG+ Sbjct: 185 AARLMGINVNSTISITFAIGSALGALGGVLYSLTYPQIEPYM-GMMPGLKAFIAAVFGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ + + +++ F L L+++ + Sbjct: 244 GSIPGAMIGGYLMGLIENFSKAYISSTWANVIVFG-------------ILILILVFKPSG 290 Query: 339 LLR 341 L Sbjct: 291 LFG 293 >gi|332202615|gb|EGJ16684.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA41317] Length = 318 Score = 96.9 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 G S + + + V A++SGA +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSKSPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGAVVSAIVLGILNMLLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|17548927|ref|NP_522267.1| amino-acid composite ATP-binding transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17431177|emb|CAD17857.1| probable amino-acid composite atp-binding transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 608 Score = 96.9 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 113/309 (36%), Gaps = 20/309 (6%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L++ + + LL L ++ ++ I +Y + A GL ++ G GL S Sbjct: 17 LSRNRLLTAAFVIGLALLPVLPTP-----EFWITLLNYIGLYSLVALGLVLLTGVGGLTS 71 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +GAYS L ++YGLS W+ + I+ A ++GL +++ G YL +AT+ Sbjct: 72 FGQAAFVGLGAYSTAYLSTQYGLSPWIGLLAGLAITVASAYVIGLITMRMSGHYLPLATI 131 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + + I + M+Y++ Sbjct: 132 AWGLSLFFLFGNLAFL---------------GKYDGLNGIPVLNLLGKPLQTGREMFYLI 176 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++ + L + A R ++ ++ + K+ F ++ ++G Sbjct: 177 WAVVVVAVLAVQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVAAAILACISGF 236 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + ++P F + I + + ++GG+ + +L + + + Sbjct: 237 LYAHLQRAVNPTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQNLLPKLLG 296 Query: 308 SLLKFDCSF 316 S F+ Sbjct: 297 STGNFEIIV 305 >gi|254437153|ref|ZP_05050647.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] gi|198252599|gb|EDY76913.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] Length = 366 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 128/340 (37%), Gaps = 32/340 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------YG 89 Y S+ IY +FA GL++ G GL ++ V A+GAY+Y +L + +G Sbjct: 10 YFLSLLTVGGIYAIFALGLNVNWGFAGLFNVGIVGFAAVGAYTYALLTTAESTFHIGGFG 69 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + + M S ++GL ++ R DYLAIAT+ ++EI + IL ITNG G Sbjct: 70 LPLPFGMFAGMMTSAVIAGLIGLICIRLRADYLAIATIGIAEIIKLILKNETEITNGPRG 129 Query: 150 IYVADRLY-------------FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 I R + F ++ +L + ++ Sbjct: 130 INKIPRAWEHFSEERFYSSWPMSWFGTPENWEAFFDTLPNWYWQPLFAGTILLVMYVIYR 189 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ R + IR+N+ A + + ++ AF + +A +G+AG+ FA I Sbjct: 190 MLERARTSPWGRMMTAIRENEPAARAAGKDVTRRRIEAFIIGAAIMGLAGSLFAQHLRLI 249 Query: 257 SPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 P +V ++I+GG + ++ + + N + Sbjct: 250 EPTNTFDPSKVTFLVWVMLIVGGSGNNRGAMLGAFLIWTLWSASELIITGAINLIGDIFS 309 Query: 315 SF---------NMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + L+ I + +++ +L P Sbjct: 310 TLDPSILQTRAGFLRMMLIGILMQVILQRYPGGILPEVRP 349 >gi|295091908|emb|CBK78015.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Clostridium cf. saccharolyticum K10] Length = 330 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 129/312 (41%), Gaps = 31/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + + YV+ A L++ VG LG LSL +GA+S + + + Sbjct: 5 LKGILVPLCTYVILAVSLNLTVGILGELSLGHAGFMCVGAFSGAFFTNAMMKTFGIAKND 64 Query: 99 SAMISGACG--------------MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 I G +++G+P L+ +GDYLAI TL EI +N++ Sbjct: 65 DMAILGLFIVAIVIGAAVAAVFGILIGIPVLRLKGDYLAIVTLAFGEIIKNLINALFVGI 124 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 + + + L + + + + + + L+ I+ L + Sbjct: 125 DSRGIHFSLKDAASLNLEGGGEVIIKGAQGISGTPKAATFTIGIILVLLTLFIVQNLIHS 184 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR--ISPDMFK 262 A IRDN+ A S+ I KL AF+VS+A G+AG +A + +P F Sbjct: 185 RTGRAIMAIRDNRIAAESVGINITKYKLLAFSVSAALAGVAGVLYAHNLATLAATPKAFG 244 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 ++ +I+++ V+LGG+ ++ A IL + EL G++ Y Sbjct: 245 YNMSIMILVFVVLGGIGNIRGSIIAAVILTLLPELLRGLSSY---------------RML 289 Query: 323 LMVIALFLVILM 334 + I L +++L+ Sbjct: 290 IYAIVLIVMMLL 301 >gi|332523408|ref|ZP_08399660.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus porcinus str. Jelinkova 176] gi|332314672|gb|EGJ27657.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus porcinus str. Jelinkova 176] Length = 317 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 131/337 (38%), Gaps = 42/337 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K ++ L L + Y + + I I ++ A G ++V+G G L Sbjct: 6 KSLGTWLIMMTCLFLALSFLINGGLLGPYHVQILMGIGISIIMAMGTNLVLGFSGQFPLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I + ++ + + +++G +I+G P+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYATAIFTNYMPTYLGFYISMLLGVLVAGVLAIIVGFPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++EI + ++ ITNG AG+ R + Sbjct: 126 GVAEIIRIAIVNGGDITNGAAGLTGILRYSTWPV-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 A +L R+++ ++R+N+ A S+ K+ FA ++ +AG+ Sbjct: 161 FVFVVFIAVAMLNFLRSSVGRQVISVRENEIAAESMGVNTTKIKVLTFAFAAMTASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + P F +I + I +LGG+ S++ A +L + Sbjct: 221 LYVGYIGTVVPKDFTIMRSIDYLIIAVLGGLGSMTGTILAAIVLGVLNMYLQSF------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + IAL LV++ + L+ + Sbjct: 275 ---------SDIRMIIYSIALILVMVFKPGGLMGTKE 302 >gi|300691047|ref|YP_003752042.1| high-affinity branched-chain amino acid transport system permease (livH or livM) [Ralstonia solanacearum PSI07] gi|299078107|emb|CBJ50750.1| putative high-affinity branched-chain amino acid transport system permease (livH or livM) [Ralstonia solanacearum PSI07] Length = 547 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 273 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRNHFPGAFDWYLPAALPAAFLAAAVVGFA 332 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 ++ + + +L + + + S + + Sbjct: 333 LER--SVLRHLYGRPLETLLATFGVSLLLMQAVRSLFGAQNVEVANPSWMSGGIALYPGL 390 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + A L RT + R N+ + AFA Sbjct: 391 ILPYNRLVILAFALVVVAMAWAVLNRTRLGLFVRATTQNRAMAACVGVRTWKVDSYAFAF 450 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L + + Sbjct: 451 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 508 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R L L+ S Sbjct: 509 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 546 >gi|91977974|ref|YP_570633.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91684430|gb|ABE40732.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 542 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 92/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S L S +I+ ++ Sbjct: 263 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEVIRTSYPALFDYSLLIAVPLAFLVA 322 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 ++ + + +L W + + S Sbjct: 323 GAIGVLIER--SVIRFLYGRPLETLLATWGLSLILQQAVRTLFGPTNREVGNPSW-MSGA 379 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++L + A ++ LR TA+ R + N++ S+ Sbjct: 380 FELGQITITYNRLWILCFTLAVFAILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 439 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 440 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 497 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + +++ + L I R L L+ + Sbjct: 498 GIANKFLEPVAGAVLAK-------------IAILVLIILFIQKRPRGLFALKGRAVE 541 >gi|319764575|ref|YP_004128512.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|317119136|gb|ADV01625.1| inner-membrane translocator [Alicycliphilus denitrificans BC] Length = 345 Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 17/322 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + L L + Y M + I V + GL+I+ G GL+SL +GA Sbjct: 24 AWLIIAAALLLLFPFAASDYWLYMACLVAINVASSTGLNILTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL +R G L + +++ G+++G+PSL+ +G YLAIAT+ S I + Sbjct: 84 YTVAILQTRLGTPFLLNLLAGGVVAMLGGIVVGIPSLRVKGLYLAIATIAASFIAHFLFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 ++ IT G AGI + R + +Y++++ + L Sbjct: 144 NFQ-ITGGTAGISMPPA---------------RLLGMDLDTSFRLYWLIVPVTLLMLLGA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT I A+ IRD + L ++ KL +F +SS + G+AG +A ++P Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGIAGGLWAYFFRVVTP 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F S +I ++ +I+GGM S+ + V EL + + Sbjct: 248 ESFPLSMSIFFLAAIIVGGMGSILGGIFGAVFMTMVPELLKLIVD-LLPGGAALAVFLSP 306 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 + + ++ L Sbjct: 307 VRLIVFGALIIGFLVFEPLGLA 328 >gi|296110586|ref|YP_003620967.1| hydrophobic amino acid uptake (HAAT) family ABC transporter,permease protein LivM [Leuconostoc kimchii IMSNU 11154] gi|295832117|gb|ADG39998.1| hydrophobic amino acid uptake (HAAT) family ABC transporter,permease protein LivM [Leuconostoc kimchii IMSNU 11154] Length = 324 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 83/340 (24%), Positives = 143/340 (42%), Gaps = 43/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 KY LA++ +L+ + Y + + I I ++ A GL++++G G SL Sbjct: 7 KYTLSWATLALMIVILIVVMTMFDIIGPYGLTTIVLIGINLIAAIGLNLIIGMSGQFSLG 66 Query: 70 CVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ ++ + + + V AM+SG +I+G+P+L+ RGDYLAIATL Sbjct: 67 HAGFMAIGAYATALIVTSVPTIFGFIISLLVGAMLSGIVALIVGIPTLRLRGDYLAIATL 126 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +++ +K F I + ++ Sbjct: 127 GVSEIIRILIMNFKFTRG--------------------------PAGIFAIPSFVTWPLV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G+ L+ I++ L R+ I A +RDN+ A SL K+ AF + + +AG Sbjct: 161 FGLAVLTIIIVVNLVRSPIGRAIIAVRDNEIAAESLGINTTKYKVIAFVLGAVLAALAGG 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A+ +SP F F ++I ++ IV+LGG+ S+S L + + Sbjct: 221 LRASFIQSVSPQDFTFMQSITILIIVVLGGIGSISGTVVTAVALGILDVILQNF------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L +V+L R L S Sbjct: 275 ---------GSLRMVVYAVVLIVVMLFRPQGLFGRSEFSL 305 >gi|239624770|ref|ZP_04667801.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521156|gb|EEQ61022.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 299 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 119/309 (38%), Gaps = 41/309 (13%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 YI+ + I I ++ GL I+ G GL S+ +GAY+ IL Y + + + Sbjct: 3 YIEGITISTCINIVCVCGLVILTGYTGLFSMGHACFMCLGAYASAILTKYYSVPFLIALL 62 Query: 98 VSAMISGACGMIMGLPSLKFRGDY--LAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 V ++G +++G+P+L+ + AIATL E + I+ G Sbjct: 63 VGGAVAGLLSLVIGVPTLRGKMSADCFAIATLGFGEAVRIIMSNISHPYFG--------- 113 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 I +G+ + + + R+ IRD Sbjct: 114 ---------------GARGMSGIMPYTTLPWAVGLALAAIILTINYARSQHGRIALAIRD 158 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +Q A + + K+ + S+ F G+ G A + P++F + + +++ V+L Sbjct: 159 HQDASELIGVNVFHEKIKSLVYSAFFCGVGGGMMAHYYTYMVPNVFNATVSNNLLTSVVL 218 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG++S++ + TAIL E+ + + + + L +++ +R Sbjct: 219 GGVSSVTGPSLGTAILTFTPEVLRFL---------------SNWRLAIYGLVLVIIMRVR 263 Query: 336 SHSLLRLRT 344 LL + Sbjct: 264 PEGLLGYKE 272 >gi|221639726|ref|YP_002525988.1| ABC branched chain aminoacid transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221160507|gb|ACM01487.1| ABC branched chain aminoacid transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 642 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 97/303 (32%), Gaps = 26/303 (8%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISG 104 IY + A GL+I G + ++++ +GAY+ + S Y +SI + +P++ ++ Sbjct: 361 IYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWISDYTISILVALPLAFAVTF 420 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 A G+ M + + TL+ + L + G + Sbjct: 421 AAGVAMERLVI-RHLYRRPLETLLATFGISIALQQLAKNIFGTQARPLTAPA-------- 471 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + + V + + + + RT + R + N S+ Sbjct: 472 -WLDGALSFNDVVSISYIRIAIFVLAMIFLGVFLFIMTRTRLGLEVRAVTQNPSMAASMG 530 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + F + S G+AG S + V++GG+ ++ Sbjct: 531 INPDRINMLTFGLGSGIAGIAGVAIGLFAKVTSELGQDYIVQS--FMTVVVGGVGNIWGT 588 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 A++ GV + +N + + F + R ++ L+ Sbjct: 589 LAGAAMIGGVQKGIEWLNPSNTLAAQTYMILFIIIFIQF-----------RPRGIVALKG 637 Query: 345 PSN 347 + Sbjct: 638 RAA 640 >gi|39936783|ref|NP_949059.1| putative branched-chain amino acid transport system permease [Rhodopseudomonas palustris CGA009] gi|39650640|emb|CAE29163.1| putative branched-chain amino acid transport system permease protein [Rhodopseudomonas palustris CGA009] Length = 339 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 30/319 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++L L L ++ +I +LIY + L+I+ G G SL YA+GAY+ Sbjct: 30 IVVVLLLCLAPLVAKNFIIFQMTMVLIYAIAVLALNILTGGSGQFSLGQSAFYAVGAYTS 89 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IK 139 IL +G++ L +P+S I CG + GLP+L+ G YLA+AT ++ +L Sbjct: 90 AILMENFGVNYALTLPISGAICFICGYLFGLPALRLSGIYLALATFALATAMPQLLKLHY 149 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ T G G+ + G + + +YY +L + + Sbjct: 150 FEHWTGGVQGLVITKPDAPFGLPMSQDMW--------------LYYFVLVVSMAIYVASV 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L ++ A IRDN+ A ++ + K AF +S+ G+AG A + ++PD Sbjct: 196 NLLKSRSGRAMMAIRDNEIAASAMGVDVARYKTLAFGISAGITGVAGGLGAIAVQFVAPD 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + I + +++GG+ L A ++ V + G + + Sbjct: 256 SYTIQLAIALFLGMVVGGVGWLPGSIVGAAFIVFVPNIAEGFSKGLSGA----------- 304 Query: 320 HTTLMVIALFLVILMRSHS 338 + + L L+I + H Sbjct: 305 ---VFGVILVLIIFLLPHG 320 >gi|315221924|ref|ZP_07863835.1| amino acid or sugar ABC transport system, permease protein [Streptococcus anginosus F0211] gi|315188890|gb|EFU22594.1| amino acid or sugar ABC transport system, permease protein [Streptococcus anginosus F0211] Length = 316 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 83/340 (24%), Positives = 147/340 (43%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + +L + LL L + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNILWFVLLLAGYGLLTLLVSAGVLNDFYLQILQQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+GS+ + + + + A+I+GA +I+G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAAAIIGSKSATYPAFFAAMVLGALIAGAVALIVGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGDLTNGAAGILGIPAFTNWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + + R+ I A ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YFFVVMTTILTINFLRSPIGRATLSVREDEIAAESVGVNTTKIKVIAFVFGAMTASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F +I V+ IV+ GG+ S++ A +L + + + Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSMTGTIVAAIVLGILNMVLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 275 ---------ASIRMIIYSLALILVMIFRPGGLLGTWELSL 305 >gi|194291182|ref|YP_002007089.1| branched-chain amino acid ABC transporter permease/ATP-binding protein [Cupriavidus taiwanensis LMG 19424] gi|193225017|emb|CAQ71028.1| putative branched-chain amino acid transport system permease, ATP_binding component [Cupriavidus taiwanensis LMG 19424] Length = 615 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 123/311 (39%), Gaps = 22/311 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + ++ ++G I +Y + A GL ++ G G+ S +GAYS L +++GL Sbjct: 42 PVLPTPEFWITLGNYIGLYSIVAIGLVLLTGVGGMTSFGQAAFVGLGAYSTAYLTTQFGL 101 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S W + V +I+ A ++GL +++ G YL +AT+ + + + G+ Sbjct: 102 SPWFGLLVGLVITMASAYVIGLITMRMSGHYLPLATIAWGLSLFFLFGNLEFL-GKYDGL 160 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L F G ++S M+Y++ + L+ + L + A Sbjct: 161 NGIPVLSFFGIELQS--------------GRSMFYLIWAVVLLAVLAMQNLLNSRPGRAI 206 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ ++ + K+ F V++ ++G +A + ++P F + I + Sbjct: 207 RALKGGGVMAEAMGVNTAWMKVVIFVVAAILACVSGFLYAHLQRAVNPTPFGLNYGIEYL 266 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + ++GG+ + IL + ++ G+ + F + + L L Sbjct: 267 FMAVVGGVGHVWGAVLGAGILTILKDVLQGVLPKLLGANGNF-------EIIVFGVLLVL 319 Query: 331 VILMRSHSLLR 341 ++ + Sbjct: 320 LLQYARDGIWP 330 >gi|283954567|ref|ZP_06372086.1| branched-chain amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 414] gi|283793971|gb|EFC32721.1| branched-chain amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 414] Length = 349 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 76/355 (21%), Positives = 135/355 (38%), Gaps = 47/355 (13%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + ++F+F+ Y ++ QI I+++ A +++ G G SL AIG Sbjct: 9 LIFLIVSIVFIFISPYIFGDYGLNIINQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 68 Query: 78 AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 AY+ + + + + S L + V + S +I+ + Sbjct: 69 AYTAALVLLSTDAKNDQFFLDGPSSFILAIHSNSFILALIVGGICSSLLALILSFAVFRV 128 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL I + I + ITNG G+ + Sbjct: 129 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 168 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 Y G+ ++ +IL + + A + IRD++ A ++ I + K AF+ Sbjct: 169 -----TVYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINIFWIKTLAFST 223 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+ G+ G A +SP F F ++ I++LGG+ S + ++IG E Sbjct: 224 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAVIGAILVIGGSEW 283 Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ SL S + I L LV+L ++ S+ + Sbjct: 284 LRFLDELNIKIDSLNLDIQSTPGFRMVVFSIVLVLVMLFARKGIMGYYELSDVIR 338 >gi|33596654|ref|NP_884297.1| high-affinity branched-chain amino acid transport system permease protein [Bordetella parapertussis 12822] gi|33573355|emb|CAE37339.1| high-affinity branched-chain amino acid transport system permease protein [Bordetella parapertussis] Length = 345 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 69/322 (21%), Positives = 124/322 (38%), Gaps = 17/322 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL L L + Y + + I+V A GL+I+ G GL+SL +GA Sbjct: 24 VWLALLLAALALFPFLANAYWLYLACLVAIHVASATGLNILTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L G L + + + G+++G+PSL+ +G YLAI T+ S I + Sbjct: 84 YTVAVLEVHVGTPALLNLLAAGAVVMLGGLVVGVPSLRVKGLYLAIVTIAASFIAHFLFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 RL + +Y++++ + L Sbjct: 144 NLPLTGGTAGLQVPPARL----------------LGVDLDTSFKIYWLIVPITVLMVLGA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT I A+ IRD + L ++ KL +F +SS + G+AG +A ++P Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIDLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++ +I+GGM S+ + V E + + + Sbjct: 248 ESFPLIMSIFFLAAIIVGGMGSILGAILGAVFMTMVPEFLK-LVVGWLPVGDDALGLLSP 306 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 T + + ++ L Sbjct: 307 VRTIVFGALIVGFLIFEPLGLA 328 >gi|120612150|ref|YP_971828.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120590614|gb|ABM34054.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Acidovorax citrulli AAC00-1] Length = 526 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 89/296 (30%), Gaps = 17/296 (5%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY+ ++ + + + + + Sbjct: 247 VALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQRYLPGAFDAYLVAAVPVAFLAS 306 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + + +G + + Sbjct: 307 ALMGAVLER--GVIRFLYGRPLETLLATWGISLMLQQLVRSVFGAQNVGVENPAWMSGGV 364 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + +++ + + + RT + R + N+ + Sbjct: 365 QVLENLQLPWNRLVIVVFAFAVLGGVAFLIGRTRLGLFVRGVTQNRPIASCMGVNTARVD 424 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 AFA+ S G+AG A S+ + +V+LGG+ L+ A L Sbjct: 425 TYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDAFMVVVLGGVGQLAGTVYAALGL 482 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + G +++ + + I R + ++ + Sbjct: 483 GVLNKFLEGWAGAVLAK-------------IAVLVLIIVFIQKRPQGIFAVKGRAA 525 >gi|296134156|ref|YP_003641403.1| inner-membrane translocator [Thermincola sp. JR] gi|296032734|gb|ADG83502.1| inner-membrane translocator [Thermincola potens JR] Length = 350 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 72/356 (20%), Positives = 135/356 (37%), Gaps = 45/356 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K ++ L + L + ++ Y + IYV+ A +++V G GL SL Sbjct: 2 KKRDLILTLVSLILLFVCVYFADAYLDSYKVRILNLCAIYVILALSMNLVNGFTGLFSLG 61 Query: 70 CVIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGACGMIM 110 A+GAY+ +L L + ++ ++S G ++ Sbjct: 62 HAGFMAVGAYTTALLTMPPLVKAQNFFMAPLIKPLDSITLPFLPALLIAGVLSALVGFLI 121 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 G P+L+ +GDYLAIATL +EI + I + +TNG G+ Sbjct: 122 GAPALRLKGDYLAIATLGFAEIIRVIFTNTQSLTNGALGLKGIPVTTN------------ 169 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 + G+ ++ +I L ++ A + IR+++ A S+ I Sbjct: 170 -------------LWWSFGIAVITVILIGSLINSSFGRALKAIREDEIAAESMGINIFRH 216 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 K+ +F + + F G+ G + P MF+F ++ I+ILGGM S++ + I Sbjct: 217 KVLSFTIGAFFAGIGGGLLGNLLGTVDPLMFRFFLTFNILLIIILGGMGSITGSIISAFI 276 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + E ++ L + L +V+L ++ + Sbjct: 277 ITIAGEALRFLDESITIGSLYIP-GIPGLRMVVFSALLMVVVLFFRQGIMGTNEFT 331 >gi|294084500|ref|YP_003551258.1| inner-membrane translocator [Candidatus Puniceispirillum marinum IMCC1322] gi|292664073|gb|ADE39174.1| inner-membrane translocator [Candidatus Puniceispirillum marinum IMCC1322] Length = 362 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 76/344 (22%), Positives = 152/344 (44%), Gaps = 32/344 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L + ++L L LL F+ + +Y+ ++ + ++++ A GL+IV G G ++ Sbjct: 18 LARKHRLLPWLLAYIALLPLPFILSFLFSEYLINLANRACLFILLAVGLNIVKGFCGQVT 77 Query: 68 LNCVIAYAIGAYSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 + + YAIGA + I +GLS+W+ IP++ +++ G+I+GLPS++ Sbjct: 78 VGHIGLYAIGAVTSAILALEPGSFGDTWGFGLSVWVAIPIAVLVTALAGVIVGLPSVRLE 137 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 G YLA+ATL + E + I+I P G+ + G S Sbjct: 138 GAYLALATLGLGESVR-IMIAVTPQLGSSTGLMMIPPPSVGGFAFESFT----------- 185 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 YY+++ + + R+A A++ IR++ A ++ KL AF +S Sbjct: 186 ---SYYYLVMTAAVIGIYFSFAILRSATGRAFQAIREDTIAASVNGINVVKYKLLAFVLS 242 Query: 239 SAFIGMAGAFFAASRD-RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + + G+AGA FA + + F E + ++ +V+LGG+ ++ ++ + Sbjct: 243 AVYAGLAGALFAHMPPGYLHHNNFTIIEMVTLLLMVVLGGIGNVWGGVIGAIVVTIAYDQ 302 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + FY F + + +++ L++L + Sbjct: 303 TKDLVFY-------FMDRPIIIQPIVFGLSMVLLVLFMPRGIGG 339 >gi|170747862|ref|YP_001754122.1| urea ABC transporter, permease protein UrtB [Methylobacterium radiotolerans JCM 2831] gi|170654384|gb|ACB23439.1| urea ABC transporter, permease protein UrtB [Methylobacterium radiotolerans JCM 2831] Length = 523 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 107/322 (33%), Gaps = 21/322 (6%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 LGA ++ Y S+G + ++ A GL+I G +G++++ +GAY+ ++ Sbjct: 222 LAILGALQNVWYGISLG---SVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTYLVQE 278 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 L S IS C ++ ++ + + +L + Sbjct: 279 LIRTKAPSLFGWSLAISIPCAFLVAGLVGVLIERFI--IRFLYGRPLETLLATFGVSLAL 336 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + G+ + F + ++++ + ++ LRRT+ Sbjct: 337 QQGVRTIFGPTNREVGAPAF-MSGAFDLYGLSITWGRMWIIVFALAVFLGLLFVLRRTSF 395 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R + N++ ++ + F + S GMAG A S+ Sbjct: 396 GLKTRAVTQNRRMAAAMGIRTPYVDALTFGLGSGIAGMAGV--ALSQIDNVSPNLGQGYI 453 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I +V+ GG+ SL A L V +L + ++I Sbjct: 454 IDSFLVVVFGGVGSLWGTLVAALTLGVVNKLAEPYIGAVLAKIG-------------LLI 500 Query: 327 ALFLVILMRSHSLLRLRTPSNF 348 + L I R L L+ + Sbjct: 501 FIILFIQKRPRGLFALKGRAVE 522 >gi|15900646|ref|NP_345250.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|15902705|ref|NP_358255.1| branched chain amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|111658357|ref|ZP_01409045.1| hypothetical protein SpneT_02000497 [Streptococcus pneumoniae TIGR4] gi|116516639|ref|YP_816148.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|148985899|ref|ZP_01818993.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71] gi|148992413|ref|ZP_01822108.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|148997173|ref|ZP_01824827.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|149003366|ref|ZP_01828255.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|149007630|ref|ZP_01831247.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|168488419|ref|ZP_02712618.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae SP195] gi|168575410|ref|ZP_02721346.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae MLV-016] gi|169832760|ref|YP_001694213.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae Hungary19A-6] gi|182683671|ref|YP_001835418.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|221231547|ref|YP_002510699.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae ATCC 700669] gi|225856427|ref|YP_002737938.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae P1031] gi|225860725|ref|YP_002742234.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae Taiwan19F-14] gi|237650406|ref|ZP_04524658.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae CCRI 1974] gi|237822481|ref|ZP_04598326.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae CCRI 1974M2] gi|298230938|ref|ZP_06964619.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255819|ref|ZP_06979405.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502536|ref|YP_003724476.1| branched chain amino acid ABC superfamily transporter membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|303255834|ref|ZP_07341875.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae BS455] gi|303260015|ref|ZP_07345989.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|303261421|ref|ZP_07347369.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|303264088|ref|ZP_07350009.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|303266299|ref|ZP_07352190.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|303269540|ref|ZP_07355304.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|307067354|ref|YP_003876320.1| branched-chain amino acid ABC transporter permease [Streptococcus pneumoniae AP200] gi|307127698|ref|YP_003879729.1| branched chain amino acid ABC transporter membrane-spanning permease [Streptococcus pneumoniae 670-6B] gi|14972225|gb|AAK74890.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|15458247|gb|AAK99465.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae R6] gi|116077215|gb|ABJ54935.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|147756873|gb|EDK63913.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|147758549|gb|EDK65547.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|147760785|gb|EDK67756.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|147922045|gb|EDK73169.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71] gi|147928730|gb|EDK79743.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|168995262|gb|ACA35874.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae Hungary19A-6] gi|182629005|gb|ACB89953.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|183573068|gb|EDT93596.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae SP195] gi|183578456|gb|EDT98984.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae MLV-016] gi|220674007|emb|CAR68520.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae ATCC 700669] gi|225724713|gb|ACO20565.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae P1031] gi|225727651|gb|ACO23502.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae Taiwan19F-14] gi|298238131|gb|ADI69262.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|301799768|emb|CBW32337.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae OXC141] gi|301801598|emb|CBW34296.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae INV200] gi|302597218|gb|EFL64323.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae BS455] gi|302637555|gb|EFL68042.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|302638934|gb|EFL69395.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|302640925|gb|EFL71308.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|302644229|gb|EFL74485.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|302646493|gb|EFL76719.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|306408891|gb|ADM84318.1| ABC-type branched-chain amino acid transport system, permease component [Streptococcus pneumoniae AP200] gi|306484760|gb|ADM91629.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae 670-6B] gi|327390108|gb|EGE88451.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA04375] gi|332073123|gb|EGI83602.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA17570] gi|332076030|gb|EGI86496.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA41301] gi|332077167|gb|EGI87629.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA17545] Length = 318 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 G S + + + V A++SGA +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSKSPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|163858812|ref|YP_001633110.1| putative branched-chain amino acid transport permease [Bordetella petrii DSM 12804] gi|163262540|emb|CAP44843.1| putative branched-chain amino acid transport permease [Bordetella petrii] Length = 312 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 126/328 (38%), Gaps = 25/328 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V +L + ++L+ + A +++VG G+ S + +GAY Sbjct: 9 WVLWAVLLSMPYWMTLLGGYTDLASRLLVIGLAAMATNLLVGHTGVNSFGHAAYFGLGAY 68 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + S + ++ GM++G ++ RG Y A+AT+ ++F I + Sbjct: 69 ATGLTLKYLMPSTPTAFVMGVVVGTLGGMLIGALIVRLRGIYFALATIAFGQVFYFIAFR 128 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T G G+ RL F + + YYV+L + L A + Sbjct: 129 WNSVTGGDNGLRGFQRLAIDL----------GFTQLDITSSLAFYYVVLAILALCAYAMA 178 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + R+ + + IR+N++ L+ + A+ +S F+ +AG+ +A + SP Sbjct: 179 TILRSPFGHTLQAIRENERRAQFLSIPVNRHIWIAYTISCFFVSIAGSLYALLNNFASPH 238 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 ++++ + + ++GGM S AI + + G+ + Sbjct: 239 DLYWTQSGDFVLMAVIGGMRSFWGPLLGAAIFVLAQDYLSGVTQDW-------------- 284 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + LV+L+ + L Sbjct: 285 -MFFIGMIFVLVVLLIPRGIAGLFQRRA 311 >gi|254502684|ref|ZP_05114835.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222438755|gb|EEE45434.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 401 Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 116/333 (34%), Gaps = 28/333 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + LI+ +FA G +I+ G G LS +G+Y+ V + +++ Sbjct: 39 NAGYPDLMQRFLIFGIFAIGFNILFGLTGYLSFGHAAFLGVGSYAGVWMMKLLTMNVVPA 98 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPITNGKAG----- 149 I +S + +G +++G SL+ G Y +I TL +++ ++ PITNG+ G Sbjct: 99 IIISVIFAGLFSVVVGYISLRRSGIYFSILTLAFAQMSFSLAYSVLTPITNGETGLQLAL 158 Query: 150 ---------IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + F ++ YY+ + ++ I + Sbjct: 159 DDPRILGVSQVDGSIPPANFFGLPMRESFELTMGGWLFTFNVGYYLCAVVMMIAFYIAIR 218 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + R+ R ++ NQ+ L+AF +S + G+AG A + Sbjct: 219 IFRSPFGMMLRAVKSNQQRMNFTGLNSKPYTLAAFVISGMYAGLAGGLMVAMDPLAGAER 278 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 +++ + V+ + ILGG +L + + +N Sbjct: 279 MQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYFENIFSKINDNILYGWFSGLPEGIADF 338 Query: 321 TTL-------------MVIALFLVILMRSHSLL 340 + I L+++ ++ Sbjct: 339 LVFVIHPFIGKGWHLTLGIMFMLIVIFLPGGIM 371 >gi|121608953|ref|YP_996760.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121553593|gb|ABM57742.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 315 Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 126/312 (40%), Gaps = 31/312 (9%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + Q+Y + ++LI+ + A L++++G G++SL + GAY+ IL Sbjct: 27 VAQAFGQEYYIGVVSRMLIFALAASSLNLILGFGGMVSLGHAAYFGAGAYTVGILMQNGV 86 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 LS WL P++ ++ ++GL SL+ +G Y + TL +++ I+I + Sbjct: 87 LSGWLSWPLAMLVGALLACLVGLISLRTKGVYFIMITLAFAQMIYYIVIGLEVKGG---- 142 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + + +YV+L + + +I L + Sbjct: 143 ------------DESIRLPQRSSIGLNLSSDTTFHYVVLVLVSIFLLLIHRLINSRFGRV 190 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + IR+N+ ++ ++ KL F ++ A AGA A +SP + ++++ + Sbjct: 191 LQAIRENETRMEAIGYPVLRYKLVCFVIAGALASFAGALLANQNQFVSPGLLHWTQSGSL 250 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +VILGG S ++ + E+ ++ ++ L Sbjct: 251 LVMVILGGAGYFSGGIIGAIAVLMLEEILSAYTIHW---------------QLILGAILL 295 Query: 330 LVILMRSHSLLR 341 V+L+ + L Sbjct: 296 GVVLLLPNGLAS 307 >gi|315612830|ref|ZP_07887741.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|315314940|gb|EFU62981.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] Length = 318 Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L + L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNTLWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + + + + A+ISGA +++G+P+L+ +GDYLA+ATL Sbjct: 66 HAGFMAIGAYAAAIIGSKSPTYGAFFGAMLLGALISGAVALLVGIPTLRLKGDYLAVATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +I +TNG AGI + Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ L R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YLFVVVTTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305 >gi|221370038|ref|YP_002521134.1| Inner-membrane translocator precursor [Rhodobacter sphaeroides KD131] gi|221163090|gb|ACM04061.1| Inner-membrane translocator precursor [Rhodobacter sphaeroides KD131] Length = 331 Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 128/330 (38%), Gaps = 29/330 (8%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 +L + L L A + Y+ + I+ A +++G G LSL Sbjct: 6 LLRVTVAAVALFLVAATLALRLDDYLLYVVTLGAIFATLAVSFDVLLGYTGYLSLAHGAL 65 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 + +GAY+ IL + +G W +P + +++GA G ++ L + + RG Y A+ TL + I Sbjct: 66 FGVGAYACGILTAHHGWPFWAALPAAGLVAGAAGAVIALLAFRTRGLYFAVLTLGIGLIG 125 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + +T G G + + ++ F+ L Sbjct: 126 HQLFLVLAGLTGGVGGFVGIPSPGRPDWVPLDQNGWNALLALALLLATFLAAQLFV---- 181 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 R+ + A +R++ +L + A+L+AF S+ F G AGA FAA Sbjct: 182 ---------RSRLGAACLAVREDLTLAQALGIRVGQARLAAFVFSAIFTGFAGALFAAIS 232 Query: 254 DRISPDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++P+ F ++++V++GGM +L A+L + E + Y Sbjct: 233 NFVAPESFTVLGAGFQLVALVVVGGMGTLWGPILGAALLTALPEALRVASGY-------- 284 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L + ++ L L Sbjct: 285 -------SLMAYGVLLLVFVIFAPRGLASL 307 >gi|239817968|ref|YP_002946878.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239804545|gb|ACS21612.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 354 Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 136/343 (39%), Gaps = 23/343 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF + ++ + +V L F+ + S ++ ++ LI + A GL+I+VG Sbjct: 18 QIFPIAQDR------IAMLVLLLAAFVAVPLGVSDYWMRAILTPFLILSLAALGLNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY+ R + + + + + G++ G+PSL+ +G Sbjct: 72 YCGQISLGTGAFMAVGAYAAYNFQVRIDGMPLIASLLLGGLCATVIGVLFGIPSLRIKGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL ++ + ++ + + Sbjct: 132 YLAVATLAAQFFTDWAFLRIQWF-------------TNNSSSGSVSVAGLNVFGVPIESP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y L + A + L R+AI W +RD A + ++AKL+AFAVSS Sbjct: 179 VQKYLFCLVFVVVFALLAKNLVRSAIGREWMAMRDMDVAAAVIGIRPVYAKLTAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +G+AGA + P F + ++ +VI+GG+ S+ A ++ + Sbjct: 239 IVGVAGALWGFIHLGAWEPAAFSIDRSFQLLFMVIIGGLGSIMGSFFGAAFIVLLPLFLN 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + T + + +++ H L RL Sbjct: 299 QL--PGWLGFSISTALASHLETMIFGALIVFFLIVEPHGLARL 339 >gi|296134674|ref|YP_003641916.1| inner-membrane translocator [Thiomonas intermedia K12] gi|295794796|gb|ADG29586.1| inner-membrane translocator [Thiomonas intermedia K12] Length = 331 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 132/321 (41%), Gaps = 26/321 (8%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L+L + + ++LIY + A GL++++G G LS + +G+Y Sbjct: 28 ILALVLLTAPAWLHYVGGYNDIASRVLIYGLAAMGLNLLLGHTGGLSFGHAAYFGLGSYG 87 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 ++ ++ L + ++ G ++ +++ RG Y A+ T+ + ++F I I+W Sbjct: 88 VGLMLKYMTHNVLLALLGGTLLGGVVAAVLAPIAVRRRGIYFAMITIAIGQMFYFIAIRW 147 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T G G T S F + + + YY+++ L A ++ Sbjct: 148 QAVTGGYDG-----------LTGFSRHTLHLFGFDWTMGSLGFYYLVVACFALGALVLWI 196 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + + + + IR+NQK L + +FA+S + +AG A + SP+ Sbjct: 197 VLNSPLGHTFVAIRENQKRLTFLGLPVQRYAAISFALSGLIVALAGGLNALLDNFTSPNT 256 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 ++ + ++ I +LGGM + AI + V + + + Sbjct: 257 LNYTFSGDLVVIAVLGGMRNFWGPLVGAAIFVLVRDYASSVTDNW--------------- 301 Query: 321 TTLMVIALFLVILMRSHSLLR 341 +++ + L +L ++ Sbjct: 302 MSVIGLIFVLSVLFFPLGVMG 322 >gi|261338471|ref|ZP_05966355.1| putative branched-chain amino acid transport system, permease component [Bifidobacterium gallicum DSM 20093] gi|270276462|gb|EFA22316.1| putative branched-chain amino acid transport system, permease component [Bifidobacterium gallicum DSM 20093] Length = 327 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 124/310 (40%), Gaps = 8/310 (2%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 Y + A GL+I G GL+++ +GAY + I G ++++ I + +++ Sbjct: 18 TTAAYALAAMGLNIHFGMTGLMNMGQAGFMLLGAYGFAI-TQAMGGNLFISIVTALVLAA 76 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL--- 159 G+++G+P+LK DYLA+ TL +EI + + +T G AGI D Sbjct: 77 IYGLLLGIPTLKLGPDYLAMVTLAAAEIVRIVARSTAMTHVTGGSAGISPQDFTTQFEAL 136 Query: 160 -GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S ++ + ++ V + ++A + + + IR+++ Sbjct: 137 SPLPDGSTTFLLWTYNNNIANSWWLRIVAWILVAIAAVLCWRWFNSPWGRVLKGIREDEN 196 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A SL + K+ A + F +AG F + PD + +I++LGG Sbjct: 197 AIKSLGKNVTKYKMQALILGGLFGAIAGIVFVLP-RSVQPDSLGRTVTFYTWTILLLGGA 255 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ + +L ++ L + + ++ +AL +++ R Sbjct: 256 ATIMGPILGSCVLWVLLTLVKEVMRVSIPETVMSSNQIEALGWVIVGVALMCLVIFRPQG 315 Query: 339 LLRLRTPSNF 348 +L + F Sbjct: 316 ILGNKKELAF 325 >gi|260425454|ref|ZP_05779434.1| inner-membrane translocator [Citreicella sp. SE45] gi|260423394|gb|EEX16644.1| inner-membrane translocator [Citreicella sp. SE45] Length = 326 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 107/302 (35%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + ++ + +I+ + A GL+I +G GL+SL + + IG Y+ IL S Sbjct: 19 PGWALWADAPFTITLATRAVIFALAAVGLNIALGMGGLVSLGHAVFFGIGGYAMGILASH 78 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 L+ + ++ L ++ G + L+ I Sbjct: 79 AQNYTPLMEWPFEIAGTKSMPVIWLVAVLASGLAALLIGLLSLRTSGVYFIMITLAFGQM 138 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 + + G S+ F + I Y + G+ L + L R+ Sbjct: 139 MYFFAISWPTYGGEDGLSIYVRNGFSGLNTLDPIQFYGLCFGLLCLVLVLHARLMRSPFG 198 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 A R + ++ + +L A +S A G+AGA FA +SP M + + Sbjct: 199 LALNAARQVPERVRAVGLDPVRLQLVALVISGAITGLAGALFADLNRFVSPTMLSWQMSG 258 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ VI+GG+ L + + L G++ Y+ L F + +V Sbjct: 259 EIMVFVIIGGVARLLGPVAGAGFYVLLEHLLGGVSEYWQIFLGLFLLLVVLFGKGGLVGV 318 Query: 328 LF 329 L Sbjct: 319 LA 320 >gi|300703664|ref|YP_003745266.1| high-affinity branched-chain amino acid transporter permease (livh or livm) [Ralstonia solanacearum CFBP2957] gi|299071327|emb|CBJ42645.1| putative high-affinity branched-chain amino acid transport system permease (livH or livM) [Ralstonia solanacearum CFBP2957] Length = 547 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 77/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 273 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRNHFPGAFDWYLPAALPAAFLAAAIVGFA 332 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 ++ + + +L + + + S + + Sbjct: 333 LER--SVLRHLYGRPLETLLATFGVSLLLMQAVRSLFGAQNVEVANPSWMSGGIALYPGL 390 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + A L RT + R N+ + AFA Sbjct: 391 ILPTNRLVILAFALVVVAMAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 450 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L + + Sbjct: 451 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 508 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++ + L I R L L+ S Sbjct: 509 IEPFYGAVLAK-------------IFVLALIVLFIQKRPQGLFALKGRSAE 546 >gi|299134715|ref|ZP_07027907.1| inner-membrane translocator [Afipia sp. 1NLS2] gi|298590525|gb|EFI50728.1| inner-membrane translocator [Afipia sp. 1NLS2] Length = 318 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 123/326 (37%), Gaps = 24/326 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + L+L +G +++I + A L+ ++G G+LS + Sbjct: 9 LLANIGVWLVLATMPYWLPLIGGYTELGTRVVILGLAAMSLNFLLGYTGVLSFGHAAYFG 68 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY ++ S L I + I+G ++ RG Y A+ T+ ++F Sbjct: 69 LGAYGAGLMLRYLYPSTGLAIIFGVALGTFAAAIIGPMIIRLRGVYFAMVTIAFGQVFYF 128 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I +W +T G G+ RL YY +L + ++ Sbjct: 129 IAFRWHSVTGGDDGLTGWSRLPIDLGFTT---------LDIQGNSRLFYYFVLAIFAIAV 179 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I+ W+ R+ + IR+N++ L I ++ +S AF+ +AGA +A + Sbjct: 180 GIMAWVLRSPFGHTLIAIRENERRARFLGIPIDRHIWMSWTISCAFVSLAGALYALLNNF 239 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + P ++++ + + +LGGM S AI + + + + Sbjct: 240 VDPRALYWTQSGDFVIMAVLGGMRSFWGPMIGAAIFVVLQDYLSSQTENW---------- 289 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++L +L Sbjct: 290 -----MSFVGLFFVLIVLFFPRGVLG 310 >gi|332558745|ref|ZP_08413067.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] gi|332276457|gb|EGJ21772.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] Length = 642 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 97/303 (32%), Gaps = 26/303 (8%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISG 104 IY + A GL+I G + ++++ +GAY+ + + Y +SI + +P++ ++ Sbjct: 361 IYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWIADYTISILVALPLAFAVTF 420 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 A G+ M + + TL+ + L + G + Sbjct: 421 AAGVAMERLVI-RHLYRRPLETLLATFGISIALQQLAKNIFGTQARPLTAPA-------- 471 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + + V + + + + RT + R + N S+ Sbjct: 472 -WLDGALSFNDVVSISYIRIAIFVLAMIFLGVFLFIMTRTRLGLEVRAVTQNPSMAASMG 530 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + F + S G+AG S + V++GG+ ++ Sbjct: 531 INPDRINMLTFGLGSGIAGIAGVAIGLFAKVTSELGQDYIVQS--FMTVVVGGVGNIWGT 588 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 A++ GV + +N + + F + R ++ L+ Sbjct: 589 LAGAAMIGGVQKGIEWLNPSNTLAAQTYMILFIIIFIQF-----------RPRGIVALKG 637 Query: 345 PSN 347 + Sbjct: 638 RAA 640 >gi|239813652|ref|YP_002942562.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239800229|gb|ACS17296.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 324 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 66/327 (20%), Positives = 127/327 (38%), Gaps = 29/327 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L A Q Y +ILI V+ L+++VG G+++L +GA Sbjct: 20 IVLAVLASLPLWAAATDQYYYLDFARRILIVVLATASLNLLVGYCGMVALGHAGFVGVGA 79 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ S W L +S + +G +MG +L+ RG Y + TL +++ + + Sbjct: 80 YTVAAFVEAGVQSAWTLWALSGVCAGLVACLMGTVALRTRGVYFIMITLAFAQLLYYLAV 139 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 I G G + R P + ++++L + + Sbjct: 140 SM-RIYGGDDGYNLPFRPQVG-------------PGLSLDDSATFFWLVLAFAAACFAGL 185 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 +L + A IRDN+ +L + +L+AF ++ A G++G+ ISP Sbjct: 186 QYLLGSRFGKALCGIRDNEARMTALGYPVFRLRLAAFTLAGAIAGLSGSLLIMHNGFISP 245 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +S++ I++ +++LGG+ A T + + + E+ Y+ Sbjct: 246 SSIHWSQSSILLVMLVLGGVARPWGAAIGTTVWMVLEEVLRQSTEYWHWP---------- 295 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 + L L++L L +L Sbjct: 296 -----LGALLILIVLAAPQGLAQLHRR 317 >gi|159045236|ref|YP_001534030.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12] gi|157912996|gb|ABV94429.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12] Length = 554 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 90/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY+ + S L S +I+ + Sbjct: 275 AAIGLAITFGVMGVINMAHGELVMIGAYTTFFVQEIIRTSFPHLFDWSLLIAAPLAFAVA 334 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + +L W + + S Sbjct: 335 GAVGVAIER--GCVRFLYGRPLETLLATWGISLILQQTVRSIFGPNNREVGNPSW-MSGA 391 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++LL + A ++ L++TAI R + N+ ++ + Sbjct: 392 FEVGQMTITYNRLWILLFALAVFAVLLFVLKKTAIGLQMRAVTQNRAMAANMGIRTGWVD 451 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + + G+AG A S+ S + +V+ GG ++ A L Sbjct: 452 AMTFGLGAGIAGLAGV--ALSQIDNVSPNLGQSYIVDSFMVVVFGGAGNIWGTLAAAFSL 509 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + L+++ + L I R L ++ + Sbjct: 510 GIANKFLEPYAGAVLAK-------------ILVLVFIILFIQKRPRGLFAVKGRAVE 553 >gi|84496248|ref|ZP_00995102.1| putative branched-chain amino acid transport permease [Janibacter sp. HTCC2649] gi|84383016|gb|EAP98897.1| putative branched-chain amino acid transport permease [Janibacter sp. HTCC2649] Length = 345 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 127/334 (38%), Gaps = 31/334 (9%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 K + + +V LL+ L L + + I+ + +FA + +++G GLLS Sbjct: 21 RKLNPFVRAGMLVVALLVILALPWYIYPP----VAMDIMAWGLFAISVDLLLGFTGLLSF 76 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + + AY ++ +R GL + I A+++ + G +++ G Y A+ TL Sbjct: 77 GHAMFWGTSAYVTGLIATRSGLPFPVAILGGAVVAMLIAVPTGYLAVRRTGIYFAMVTLA 136 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 +++ I + + +T G+ G+ + +F V + + YY L Sbjct: 137 FAQMIFFIANQARDLTGGENGLQGIPKTFFGIELVETD-------------PFYFYYAAL 183 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + L A + + IRDN +L + K+ F +S+ G+AG Sbjct: 184 PLILLGAFVAWRTVSSPFGRVLLAIRDNPARARALGYDVERYKIMVFVISAGIAGLAGGV 243 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 F+ S S + + V+ I +LGG+ +L A+++ + + F Sbjct: 244 FSVSHGFASLQELIWQTSGKVVLITVLGGIGTLWGGPLGAAVVVLLEDSLASSGFNGIG- 302 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L++L+ + Sbjct: 303 -------------IITGTIFVLIVLLFRKGIWGT 323 >gi|317402272|gb|EFV82854.1| ABC transporter like protein [Achromobacter xylosoxidans C54] Length = 453 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 98/304 (32%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ I +Y M A GL ++ G GL S +GAY+ +L +R L + Sbjct: 25 YVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGVGAYTTALLTTRADA---LPAWL 81 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + ++ L YL A + + I G + + + Sbjct: 82 AWLGASPWLTLLAGLLLTLVVAYLLGAITLK---LSGHFLPLGTIAWGLSLYFAFGSVEG 138 Query: 159 LGTTVRSLIRFFRFPSSFVIYEI-FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 LG + + + +YY++ ++ L + A R ++ + Sbjct: 139 LGGHTGIPDVPAINLFGWSLTQGDEIYYLIWAFLLVAMWSTSNLLDSREGRAIRALKGGR 198 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 S+ +++ F +++ +G +A + ++P+ F I + + ++GG Sbjct: 199 VMAESMGVDTARSRMVIFIIAALQACASGWLYAHMQRFVNPNPFGLQMGIEYLFMTVIGG 258 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + + + + F + + L++ Sbjct: 259 AGQVWGALVGAGVFTVLKQWLQDWLPKLLGQTGNF-------EVIVFGFGMVLLLHRFRG 311 Query: 338 SLLR 341 L Sbjct: 312 GLWP 315 >gi|239628600|ref|ZP_04671631.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518746|gb|EEQ58612.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 321 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 60/290 (20%), Positives = 112/290 (38%), Gaps = 14/290 (4%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 L Y + Q ++Y++ GL+ +G G + + +G+Y +L + G Sbjct: 23 LPFLSRNNYNQILMNQTIVYIIAVLGLNFTMGLSGQFDFSPAAIFGLGSYMTGLLSVKLG 82 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 +S WL + + G+++G PSL+ +G Y +ATL E + +L +T G G Sbjct: 83 ISPWLGTIAAVLFGLVIGVMIGYPSLRLKGVYFVLATLGFLEATRLLLTNMTWLTEGTNG 142 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + +G + F YY+ L ++ I + + Sbjct: 143 VAGIPSYQLIGINFGNPRNF--------------YYLALFFMIIAMVISKRVIDSKWGRM 188 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 I+DN A K+ A+ + S F+ AGA A I P F F + Sbjct: 189 LIAIKDNDVAVEGCGIDKASIKIKAYILGSCFMTFAGAMNAHMFQFIHPSDFNFDFTVKF 248 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 I +++LGG+ ++ ++ + E+ + YY+ + M Sbjct: 249 IMMLMLGGLGTIPGCVMGGIVVTILPEMLKFLGEYYWLAFSTLMLIMVMF 298 >gi|220905378|ref|YP_002480690.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869677|gb|ACL50012.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 387 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 118/343 (34%), Gaps = 8/343 (2%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL +V +LL + Y S+ + I ++FA L++V G +G S + Sbjct: 34 LLFMVVGVLLICAEQFSWIDGYWLSVLKFMGINIVFAASLNLVNGYMGEFSCGHAGFMCV 93 Query: 77 GAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 GAY ++ + + ++ ++ L + + + L + Sbjct: 94 GAYVGGLISIILFTSNKLVGAPLLPPELAPLLFPLVILVAGGVAAIFGLLVALPSFKTRD 153 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + L N + + G S +R V +M ++ + S Sbjct: 154 DYLAIITIAANYIIIALIINIDVVGGPRGLSGMRGVVRAMEGVADLPWMMVWVVLLVMAS 213 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ L + + + N+ A ++ KL AF VS+ GMAGA +A Sbjct: 214 IMMLYRLVNSTLGKGIPAVCQNEVAAEIMSVNTKKVKLVAFMVSAGIAGMAGAVYAHMFS 273 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY------FNS 308 I + F ++ + +V LGGM SLS A ++E+ Sbjct: 274 SIYANSFGIMKSTEAMVMVYLGGMGSLSGSVLAAIFFTLLIEILRFALPALSDLLHHLPF 333 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + L+ + L L++ R LL R + R Sbjct: 334 VPDSFMISQEWKWVLIPLILILLMQFRPEGLLGNRELTQVFPR 376 >gi|149020392|ref|ZP_01835284.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|147930694|gb|EDK81676.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] Length = 318 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 G S + + + V A++SGA +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSKSPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGATVSAIVLGILNMLLQDV---------------TSVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|85706818|ref|ZP_01037909.1| ABC transporter permease protein [Roseovarius sp. 217] gi|85668611|gb|EAQ23481.1| ABC transporter permease protein [Roseovarius sp. 217] Length = 327 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 109/328 (33%), Gaps = 15/328 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L ++ LLLF + ++ ++ + +I + GL+I +G GL+S + + Sbjct: 6 LLNATLMAILLLFPLYAWATDEPFLITLTTRAVILAIAGVGLNIALGFGGLVSFGHALFF 65 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +G Y+ IL L + ++ + + + Sbjct: 66 GLGGYAMGILAYHAQTYTTLTDWPLTLQGTKSMPVIWIIATLTSALAALAVGALSLRTTG 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + + G S+ FP + I + + G+ L Sbjct: 126 VYFIMITLAFSQMFYYFAISWPTYGGEDGLSIYVRNGFPGLNTMDPIQFFALCYGLLALI 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L R+ R N+ ++ L AF +S A G+AGA FA Sbjct: 186 LLFTARLSRSNFGLMLGAARQNEARVAAIGQRPYRLYLIAFTLSGAITGLAGALFADLNR 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP MF + + ++ VILGG+ + A+ I + G++ Y+ Sbjct: 246 FVSPVMFSWQTSGEIMVFVILGGVGRVFGPVAGAALFILLEHSLGGLSEYWH-------- 297 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L +L L L Sbjct: 298 -------IYLGAILLGTVLFARGGLFGL 318 >gi|163760738|ref|ZP_02167818.1| branched-chain amino acid ABC transporter, permease protein, putative [Hoeflea phototrophica DFL-43] gi|162282060|gb|EDQ32351.1| branched-chain amino acid ABC transporter, permease protein, putative [Hoeflea phototrophica DFL-43] Length = 359 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 80/343 (23%), Positives = 141/343 (41%), Gaps = 19/343 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF +R ++ + ++ + L + S +++++ LI + A GL+I+ G Sbjct: 18 AIFPIREDR-------IGMMIIGAIALAIPFVASDFFLNAIMTPFLILALAAIGLNILTG 70 Query: 62 SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G LSL +GAYS + ++I +L+ +S S G+I GLPSL+ +G Sbjct: 71 YAGQLSLGTGAFMGVGAYSCYKLTTIFPDVNIVILVLLSGFFSAGIGVIFGLPSLRIKGL 130 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ TL + I+ + N + + + + Sbjct: 131 YLAVTTLAAQFFLEWCFIRIPWLYNYNSSGAIEVPERRGFGDI--------VLTGPAAGA 182 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y+V+L + + + + R I W IRD A + + AKLSAFAVSS Sbjct: 183 MTQYFVVLAIVVVVTFAVKNIVRGRIGRQWMMIRDMDIAAELMGVRPLTAKLSAFAVSSY 242 Query: 241 FIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 G+AGA F P F + + ++ +VILGG+ SL A + G+ + Sbjct: 243 LCGVAGAMFIFFYLGAAEPSAFSITLSFQILFMVILGGLGSLVGSFFGAAFIWGLPIVLR 302 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + T ++ + +++ H L RL Sbjct: 303 AGLPAMGIDINAETVFHVA--TMIVGALIIFFLIVEPHGLARL 343 >gi|72161587|ref|YP_289244.1| branched-chain amino acid transport system permease [Thermobifida fusca YX] gi|71915319|gb|AAZ55221.1| branched-chain amino acid transport system permease protein [Thermobifida fusca YX] Length = 328 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 137/324 (42%), Gaps = 6/324 (1%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + ++G +Y + A GL++ G GLL+ V +G Y + S +G Sbjct: 3 ILQVLADATRSAIGPVAAVYALAAIGLNMHFGYTGLLNFGQVGFMLVGGYGVAVSVSTFG 62 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI--KWKPITNGK 147 L + + + + A +++GLP+L+ R DYLAI T+ ++E+ + I + IT G Sbjct: 63 LPLGVGFLIGIASAVALALVLGLPTLRLRADYLAITTIAVAEVARLIYRAEFLRDITGGV 122 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ ++ S F + SF ++++ V G+ + ++++ L + Sbjct: 123 YGLQSFSTAFYQWNPFPSGTYGFGW-LSFSARDLWVMTVTWGLVLVGSAVMWLLIHSPWG 181 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 + IR+++ A SL + K+ + + F +AGA ++ I+PD F Sbjct: 182 RVIKGIREDEDAVRSLGKNVFVYKMQSLIIGGVFGALAGAMLVVNQQTITPDQFMPQVTF 241 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS---LLKFDCSFNMRHTTLM 324 + +I++LGG + ++ ++ + + + L+ Sbjct: 242 YLWAILLLGGAGRTLGPVLGSVVMWFLLSVTDSVLRQLIAADVITFIASSEIGGVRHALV 301 Query: 325 VIALFLVILMRSHSLLRLRTPSNF 348 +AL ++I+ R L+ R Sbjct: 302 GVALLVLIIFRPQGLIGNRKEMLI 325 >gi|120612460|ref|YP_972138.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120590924|gb|ABM34364.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax citrulli AAC00-1] Length = 362 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 110/333 (33%), Gaps = 26/333 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 LA+ L L + Y L+ +FA ++ G +L+L + + Sbjct: 23 WLALALCVLAFAGLALVPWVASPYASVALRDALVLAIFALSYDLLWGKAMMLTLGHAVFF 82 Query: 75 AIGAYSYVILGSRYGLSIW--LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 +GAY I ++ S +L+ V + + A + L R + AI T+ + I Sbjct: 83 GVGAYGVAIATTQLQWSWIEGMLLGVGSSAALAALLGCFLLYAGVRLHFFAIITMAVLVI 142 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + + W+ +T G GI L + + + Y +L Sbjct: 143 ARQVATSWQSVTGGDVGILGVPGLRLDVAGWQ----------LDLSSDRASYLAVLCALA 192 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 LS + L RT I N+ + +S+A G AG +AAS Sbjct: 193 LSLLFVWGLVRTRYGLVLAAIGMNEFRAKHCGFDTSRHLVVVSTLSAALAGFAGCLYAAS 252 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 ++PD+F + VI V +GG SL A + + + + Sbjct: 253 AGVVAPDLFSVLLSTEVILWVAVGGRGSLLGAVVAAVFFTRLQQEVSTYSTELWP----- 307 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++ + +L + L Sbjct: 308 ---------LILGALFLVCVLFMPRGIPGLLRR 331 >gi|56697377|ref|YP_167745.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56679114|gb|AAV95780.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 340 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 72/325 (22%), Positives = 137/325 (42%), Gaps = 17/325 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL V + F L +Q+Y+ I ++ M A ++++G G+ SL ++ +A Sbjct: 11 LLVSVLIVAGFAALPLVMTQRYLLGEVILFFLWAMVAMNWNLLMGHAGVFSLAQMLFFAT 70 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAYS + S G+SIW +P++A++S +GL L+ G Y+A+ T + + + Sbjct: 71 GAYSVAMGTSYLGVSIWAALPLAAVVSAILAFFIGLACLRLTGAYVALLTYAIVGMVHVL 130 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 +I +++ F + + YYV L ++ Sbjct: 131 IITETECF--TMVRNSCQQMFGGAAGFSQFEDFGFRKLLRGNWILGNYYVALLAFAVTIL 188 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 I+ + + A+R IRDN S +++AFA+S+ G+AGA +A Sbjct: 189 GIVVIIHGRLGLAFRAIRDNVGYASSRGIDRRKYQIAAFAISAFLTGLAGAIYAGHFRAA 248 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P +F FS + V+S+V++GG+ S ++ ++E F Sbjct: 249 GPSLFDFSTLLFVLSMVVVGGVGSTWGPIIGAGTMMLIIE---------------FSKGM 293 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 ++ +AL + +++ L Sbjct: 294 GDARDLILGVALIVFVVVMPKGLAG 318 >gi|171060358|ref|YP_001792707.1| inner-membrane translocator [Leptothrix cholodnii SP-6] gi|170777803|gb|ACB35942.1| inner-membrane translocator [Leptothrix cholodnii SP-6] Length = 330 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 68/310 (21%), Positives = 126/310 (40%), Gaps = 30/310 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y + +++++ GL++ +G G SL + IGAY+ IL Sbjct: 20 PPMLKSYGVYLFTYWVVFIIATMGLNLTIGYAGQKSLGHAAFFGIGAYTVAILMQAGIS- 78 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 W+ +PV+ + G+I+G P+L+ + YLA ATL + ++ + +T G GI Sbjct: 79 FWIGLPVAMLGCFVIGLIVGFPALRVQTIYLAFATLGFNTAVWLVMRNEEWLTGGTFGIN 138 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 R G ++ + YY +L + + +++ L R+ A+ Sbjct: 139 NIARPSLFGISLDGN--------------LAYYYFVLAVAVILGALLFGLLRSPWGKAFT 184 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RDN SL + L AFA+ + + G+AGA FA+ I P F +I++ Sbjct: 185 ALRDNPIRAESLGINVQNYTLLAFAIGAVYAGVAGALFASLVQFIDPAPFTVGASIMMYL 244 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V+LGG+ A+ + + E + + + L+ Sbjct: 245 MVVLGGLGYFFGPVLGAAVGVLLPEWMRDLKD---------------WYLFAFGSVVILL 289 Query: 332 ILMRSHSLLR 341 +L LL Sbjct: 290 MLWLPDGLLS 299 >gi|121604558|ref|YP_981887.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120593527|gb|ABM36966.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 336 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 133/317 (41%), Gaps = 27/317 (8%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L + + + Y + LI+++ GL++ +G G SL + IGAY+ I+ Sbjct: 18 ALLVLVAPQYLKNYGIYLLTYWLIFIIATMGLNLTIGYAGQKSLGHAAFFGIGAYTVAIM 77 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 WL +P +A++ A G+I+G P+L+ + YLA ATL + ++ + +T Sbjct: 78 MKAGIS-FWLGLPAAALLCFAIGLILGFPALRVQTIYLAFATLGFNTAVWLVMRNEEWLT 136 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G GI R G ++ + YY +L + + A ++ L R+ Sbjct: 137 GGTFGINNIARPVIFGYSLEANR--------------PYYYFVLAVTLVLAGLLWGLLRS 182 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A++ +RDN SL I L +FA+ + + G+AGA FA+ I P F Sbjct: 183 PWGKAFKALRDNPIRAESLGVDIRNYTLLSFAIGAVYAGVAGALFASLVQFIEPAPFAVG 242 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 +I++ +V++GG A+ + + E + + L Sbjct: 243 ASIMMYLMVVVGGAGYFLGPVIGAAVGVVLPEWLRDV------------PGVANWYLPLF 290 Query: 325 VIALFLVILMRSHSLLR 341 A+ L+++ LL Sbjct: 291 GAAVVLLMIWLPDGLLS 307 >gi|329904761|ref|ZP_08273928.1| permease component of ABC transporter protein [Oxalobacteraceae bacterium IMCC9480] gi|327547839|gb|EGF32601.1| permease component of ABC transporter protein [Oxalobacteraceae bacterium IMCC9480] Length = 326 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 119/302 (39%), Gaps = 25/302 (8%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 S+ I IL++ +FA G ++ G G LS + GAY IL ++Y + L I Sbjct: 43 SLAINILLFGLFAAGYNLTFGYTGKLSFGHAAFFGSGAYGCGILIAKYSIGWPLAILFGI 102 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++G + MGL +++ RG Y A+ TL +++ + IT G G+ + Sbjct: 103 ALAGLIALAMGLLAMRTRGIYFAMVTLALAQCVYFLFFHATSITGGDNGLRGVNINTVDL 162 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 ++ + YY +L ++ +I + + + +R+N+ Sbjct: 163 ----------GVVQLDLLNPLVKYYFMLSFVSVAIWLIARILNSPFGSVLEALRENENRA 212 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + A+L + VS G+AGA A + +S D + + V+ + +LGGM + Sbjct: 213 RACGINVERARLLSLVVSGMICGLAGALNAINLSTVSVDSLSYHTSGQVMMLTLLGGMGT 272 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 I I + + G+ + ++ + +++L + Sbjct: 273 FFGPFLGAGIFIAIEHIVTGITERW---------------QLIVGVIFIILVLFFPKGIW 317 Query: 341 RL 342 Sbjct: 318 GT 319 >gi|194397412|ref|YP_002037397.1| branched-chain amino acid ABC transporter permease [Streptococcus pneumoniae G54] gi|194357079|gb|ACF55527.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae G54] Length = 318 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 --GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 S + + + V A++SG +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSTSPTYGAFFGAMLVGALLSGVVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|319761265|ref|YP_004125202.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330823132|ref|YP_004386435.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317115826|gb|ADU98314.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329308504|gb|AEB82919.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 354 Score = 96.1 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 76/328 (23%), Positives = 137/328 (41%), Gaps = 17/328 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + + F+ + S + ++ I +LI + A GL+I+VG G +SL A+ Sbjct: 27 IAIGLILAVAFVVVPMVASDYFFQAILIPLLIMSLGALGLNILVGYCGQISLGTAAFMAV 86 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACG-MIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ L +R+ LL + + ++ GLPSL+ RG YLA+ATL Sbjct: 87 GAYAAYNLQARFDGMPLLLALIGGGLIAMVFGVVFGLPSLRIRGLYLAVATLAAQFFVDW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I + +TN + V+ + + Y + LG+ + Sbjct: 147 ITTRADWVTNNSSSGSVSAKALAIAGWQIDTPMEK-------------YLLCLGILCVLG 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254 L R+++ W +RD A + ++AKLSAFAVSS +G+AGA + Sbjct: 194 LAAKNLVRSSVGREWMAMRDMDVAAAVIGIRPVYAKLSAFAVSSFIVGIAGALWGFVHLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 P F ++ ++ +VI+GG+ S+ A I + L + ++ L Sbjct: 254 AWEPAAFSLDRSLQLLFMVIIGGLGSIMGSIFGAAFFILLPLLLNQV--PHWLGLPISTA 311 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +++ H L +L Sbjct: 312 TATYLEHMIFGALIVFFLIVEPHGLAKL 339 >gi|218782589|ref|YP_002433907.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218763973|gb|ACL06439.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 373 Score = 96.1 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 125/345 (36%), Gaps = 13/345 (3%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 K + + L+LF+ + ++I+I+ I++G G+LS Sbjct: 21 RKRYYSIGFVLPCLVLVLFVLTPFLSPSYKTLDLALKIIIFASLVASFDIMLGYTGILSF 80 Query: 69 NCVIAYAIGAYSYVI----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 + + IGAY G ++L + ++ ++ +I+ L SL+ + + A+ Sbjct: 81 GHGMFFGIGAYCVAFLNGKYGDPTYFHLFLGLLLAVAVACLLALIVSLISLRVKAIFFAM 140 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL ++E+ + K T G+ GI ++ F F V + Y Sbjct: 141 ITLALAELTIVLANKLSHFTGGEDGISISLPGIFSAAYNPG-----SFLGLDVSGRVITY 195 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y +L C +++L + + + IRDN +L + + + + M Sbjct: 196 YFILLACLGLFALMLRFTHSPLGRVLQAIRDNTDRAEALGYKTFYFQTLSILLGCTVAAM 255 Query: 245 AGAFFAASRDRISPDMF--KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G +A ++P+ + + V+ +VI+GGM +L A L+ + Sbjct: 256 TGGLYAMWVGYVNPESTLEVMAIMLNVLLMVIIGGMGTLYGGIVGAAFLLITQTFLPDLQ 315 Query: 303 FYYFNSLLKFDCSFNMR--HTTLMVIALFLVILMRSHSLLRLRTP 345 + + L I LV++ ++ Sbjct: 316 KIAIDLFPNASLLHTILERWLLLFGILFILVVIFFPKGVVGSARE 360 >gi|11497841|ref|NP_069063.1| branched-chain amino acid ABC transporter, permease protein (braE-1) [Archaeoglobus fulgidus DSM 4304] gi|2650416|gb|AAB91007.1| branched-chain amino acid ABC transporter, permease protein (braE-1) [Archaeoglobus fulgidus DSM 4304] Length = 338 Score = 96.1 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 124/322 (38%), Gaps = 32/322 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L+ + + + I+ + ++VG G ++L +GAY Sbjct: 35 ALALIVAAVMPFILPEAYLYILGLAYIFAIMVISWDLMVGYTGQVNLGHTTFVGLGAYVA 94 Query: 82 VILGSRYGL----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 IL + L I +++ G+ +G+ +L+ RG Y ++ T I+ +F + Sbjct: 95 AILQTPIRAGLSLHPALAIITGGVVAAGVGLSIGIITLRLRGYYFSLVTAILPLVFMQTV 154 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 W+ + G+ G ++ + + YY L + +S + Sbjct: 155 FIWRELFGGEEGFA--------------------IENTMLTTTVEKYYFSLAVLVVSLVV 194 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + I + +RD+++ SL K+ AFA+SS F G+AGA R +S Sbjct: 195 MKKVVDSRIGLRFMALRDSEELAESLGINATKYKVLAFALSSFFAGIAGAMVVNYRVTVS 254 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+++ +++I +LGG+ +L ++ + ++ + S Sbjct: 255 PELYGVPLMLLIILSAVLGGLGTLYGPLAGAIVI--------YLAKNWWLGQIIRTLSLP 306 Query: 318 MRHTTLMVIALFLVILMRSHSL 339 + ++ L V ++ L Sbjct: 307 INDDIVLYALLIAVGILMPEGL 328 >gi|27378035|ref|NP_769564.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351181|dbj|BAC48189.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 328 Score = 96.1 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 130/315 (41%), Gaps = 24/315 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 Y+ ++ I L+Y + +I+ G G +SL + + IGAY+ +L +++G+ Sbjct: 30 FIKDVYVQNILILTLMYAALSQSWNILSGYCGQISLGHALYFGIGAYTTELLFTKFGVLP 89 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 W + +I+ M +G P + RG Y IAT++++EI + W+ Sbjct: 90 WFGMLAGGVIAAVIAMGLGYPFFRLRGHYFVIATIVIAEIGLLLFQNWEW---------- 139 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 + F+ ++ +Y L +C L+ + WL + WR Sbjct: 140 ---AGAAMGITIPVRGDSWLKFQFMRSKLPYFYFALVLCSLAWFVTWWLEDSKWGFWWRA 196 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVIS 271 ++DN +A SL + +K+ A AVS+ + + GAF+A I P+ F ++++ Sbjct: 197 VKDNPEAAESLGVVVFNSKMGAAAVSAFLVAIGGAFYAQFLAYIDPESVMGFQFSLLMAL 256 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +LGG+ +L AILI + EL + + + + Sbjct: 257 PAVLGGIGTLWGPVLGAAILIPMTELTRSYIGGSGRGV----------DLIVYGALIVAI 306 Query: 332 ILMRSHSLLRLRTPS 346 L L+ L + S Sbjct: 307 SLALPRGLVSLFSRS 321 >gi|312881002|ref|ZP_07740802.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] gi|310784293|gb|EFQ24691.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] Length = 299 Score = 96.1 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 72/311 (23%), Positives = 124/311 (39%), Gaps = 40/311 (12%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + I + I + A G+S++ G G+ SL A+GAY IL YG+ Sbjct: 3 DGYGQGIVILLCINCIAALGISLLTGFTGIFSLGHAGYMAVGAYVAAILTVEYGVHWLPA 62 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + +++ ++G+P+L+ GDY IA+L + E + +L IT G G D Sbjct: 63 ILLGGLLAMLVSFVIGVPTLRLLGDYYTIASLGLGEAIRLLLENGGDITLGARGYPGIDG 122 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L V +G ++ + L A++ RD Sbjct: 123 FTTLP-------------------------VAVGFLVALSAAMFLLINGNFGRAFKACRD 157 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A L ++ + A+S + G+AGA A I P MF ++ + ++V+ Sbjct: 158 DYLAASLLGFHTARYRVLSLAISGFYCGVAGALMAGFMSFIQPVMFDGGKSTELTAVVVF 217 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+S +AIL V EL ++ Y + + L ++++ R Sbjct: 218 GGLGSMSGCLLGSAILTLVTELFRPISQY---------------RMLIYGLVLVVIMVAR 262 Query: 336 SHSLLRLRTPS 346 LL S Sbjct: 263 PEGLLGQNELS 273 >gi|126462706|ref|YP_001043820.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] gi|126104370|gb|ABN77048.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] Length = 642 Score = 96.1 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 97/303 (32%), Gaps = 26/303 (8%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISG 104 IY + A GL+I G + ++++ +GAY+ + + Y +SI + +P++ ++ Sbjct: 361 IYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWIADYTISILVALPLAFAVTF 420 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 A G+ M + + TL+ + L + G + Sbjct: 421 AAGVAMERLVI-RHLYRRPLETLLATFGISIALQQLAKNIFGTQARPLTAPA-------- 471 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + + V + + + + RT + R + N S+ Sbjct: 472 -WLDGALSFNDVVSISYIRIAIFVLAMIFLGVFLFIMTRTRLGLEVRAVTQNPSMAASMG 530 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + F + S G+AG S + V++GG+ ++ Sbjct: 531 INPDRINMLTFGLGSGIAGIAGVAIGLFAKVTSELGQDYIVQS--FMTVVVGGVGNIWGT 588 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 A++ GV + +N + + F + R ++ L+ Sbjct: 589 LAGAAMIGGVQKGIEWLNPSNTLAAQTYMILFIIIFIQF-----------RPRGIVALKG 637 Query: 345 PSN 347 + Sbjct: 638 RAA 640 >gi|121608916|ref|YP_996723.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121553556|gb|ABM57705.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 545 Score = 96.1 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 119/338 (35%), Gaps = 31/338 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 ++K L L+ + + + G IY +++G+ G+ S Sbjct: 94 VDKRPIWWLLGLAALFLMPMYMPAQLRGS--LLAAGAVFAIYAAINLCWMLIIGTAGIYS 151 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L A+ L + +LL + A I G I+ +P+ + G Y A+ T+ Sbjct: 152 LASYAVVGSAAFGTAWLSIHLHVPWYLLPFLGAGIGLVFGAIIAIPATRLDGFYYALLTI 211 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++E+ + ++ K + + G + + + + +Y Sbjct: 212 GLNELCRVYTLQSKAFGSARGG-------------LYGADSYIPESWTADNQSLLAFYAA 258 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN-TTIIFAKLSAFAVSSAFIGMAG 246 L + L+ ++ + T + R + ++AF A++ F +SS +G G Sbjct: 259 LVLMLLALALFRAVNGTRLGRVLRMAPEKREAFAEATGVNFRGARIMVFVISSVALGFIG 318 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 F+ A + +F F ++ + ++++GG+ I++ + ++ Sbjct: 319 GFYTAHYRGVGFSIFSFDTVLLGLGMLVIGGIGRAEGAVVGALIVVFLDKVL-------- 370 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L+ + + V+L L ++ Sbjct: 371 -------MPLGPIRLILIGLIMLGVVLFLRQGLFGIKQ 401 >gi|307702038|ref|ZP_07639046.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus mitis NCTC 12261] gi|322376941|ref|ZP_08051434.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|307616683|gb|EFN95872.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus mitis NCTC 12261] gi|321282748|gb|EFX59755.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. M334] Length = 318 Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 G S + + + V A++SGA +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSKSPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|303327416|ref|ZP_07357857.1| high affinity branched-chain amino acid ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] gi|302862356|gb|EFL85289.1| high affinity branched-chain amino acid ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] Length = 346 Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 105/332 (31%), Gaps = 7/332 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + ++ L L+ + Y + I I ++ A L+++ G GL SL Sbjct: 9 LLNIVAMFLLGCVLWQAESFLGDYQIYIAKLIFINIILALSLNLIYGFTGLFSLGQAGFI 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAY + + I + + Sbjct: 69 AVGAYVSALCILPPEQKEMMWILEPII--WPFSELFTPFWTSVLAGGFVAMIFAFLIAVP 126 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + G R+ V + I G + Sbjct: 127 VLRLGDDYLGIATLGFAEIIRV----LIVNATAVTNGSLGIKGIPSHATLLACYGWTLFT 182 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ L + N R IRDN+ A + + K+ +F + + F G+ GA + Sbjct: 183 LIVLARLVFSNFGNVLRCIRDNEIAASVMGINVFRYKVLSFCIGAFFAGVGGALLGSHLS 242 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I P MF F V+ V+ GG+ SL+ ++ ++E + ++ Sbjct: 243 TIDPKMFNFLLTFNVLMFVVAGGLGSLTGSILGATVITILLEWLRAIEEPMNLGFIELP- 301 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + L +IL R ++ R + Sbjct: 302 GIPGMRMVVFSLVLLAIILYRREGIMGTRELT 333 >gi|319956563|ref|YP_004167826.1| amino acid/amide ABC transporter membrane protein 2, haat family [Nitratifractor salsuginis DSM 16511] gi|319418967|gb|ADV46077.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Nitratifractor salsuginis DSM 16511] Length = 342 Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 64/334 (19%), Positives = 119/334 (35%), Gaps = 45/334 (13%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84 Y S+ I I+ + A +++ G G SL AIGAY + Sbjct: 26 DSYTLSILNNIGIFAILALSYNLINGVTGQFSLEPNGFVAIGAYMTALFLLPADAKLDMF 85 Query: 85 --------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + + + + +++ P + RGDYLAI TL I + Sbjct: 86 ALVDPAPIVLKMHADFIPAVIAGGLFAMFIALLLSFPVFRVRGDYLAIVTLGFGFIIRIF 145 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 I TNG G+ + + + ++ Sbjct: 146 AINNPAYTNGALGLNDIPP-------------------------YANFLWIGSIALVTFI 180 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++L + + A + +RD++ A ++ + K +AF S+ F G+ G A+ I Sbjct: 181 VMLHIVFSRYGRAMKAVRDDEDAATAMGINTFWIKTTAFMTSAFFEGVGGGLLASFLTTI 240 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SPD F F ++ I++LGG+ S++ AT +++G +E ++ Sbjct: 241 SPDQFTFLLTFQLLIIIVLGGLGSMTGSLVATILVMGSMEWLRFLDSDMVIFGHHTGAHP 300 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 M + I L +++L L + L Sbjct: 301 GM-RMVVFAILLIIMMLFARKGLFGDKELIEILR 333 >gi|288959758|ref|YP_003450098.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288912066|dbj|BAI73554.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 545 Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 105/331 (31%), Gaps = 18/331 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA + L + + + + ++ A GL++ G +G++++ IG Sbjct: 232 LAASAAATVEQKLAFWAALQNLWYGLSLGSVLLLAAIGLAVTFGVMGVINMAHGEMVMIG 291 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ ++ + L +S +++ ++ ++ + + +L Sbjct: 292 AYTTFLVQEFFRAHAPGLFDLSILVALPAAFLVSGGVGIIIER--SVIRWLYGRPLETLL 349 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 W + + S F + ++++ + A++ Sbjct: 350 ATWGLSLALQQAVRSIFGPTNREVGAPSW-MSGAFELGGLTITYGRLWIVVFAFAVFAAL 408 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 ++ L+RT + R + N+ ++ F + S G+AG A S+ Sbjct: 409 LVALKRTWFGLSIRAVTQNRPMANAMGIRTARVDALTFGLGSGIAGLAGV--ALSQIDNV 466 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + +V+ GG+ +L L + + Sbjct: 467 SPNLGQGYILDSFMVVVFGGVGNLWGTLVGALTLGSMNKFLEPYAGAVLGK--------- 517 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 L++I + L I R L L+ + Sbjct: 518 ----ILVLIFIILFIQRRPRGLFALKGRAVE 544 >gi|264676368|ref|YP_003276274.1| High-affinity branched-chain amino acidtransporter permease livM [Comamonas testosteroni CNB-2] gi|262206880|gb|ACY30978.1| High-affinity branched-chain amino acidtransport system permease protein livM [Comamonas testosteroni CNB-2] Length = 641 Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 124/315 (39%), Gaps = 33/315 (10%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + ++ Y + I + +FA L ++G GL S + +GAY +L Sbjct: 337 PMMASGSEGGSYATVLLADIFVAALFASSLHFILGPGGLHSFGHAAYFGLGAYGAALLVR 396 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 L + + + + + A ++ G ++ G YL + TL ++I I+ +W T G Sbjct: 397 TLDLPMEAALLLGPLAAAAGALLYGWFCVRLSGVYLTMLTLAFAQISWAIVFQWDDFTGG 456 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G+ + Y++ LG+C L ++ L + + Sbjct: 457 SNGLTGVWPPEW------------------ASQGSTFYWLALGICALGIYLLRRLLFSPL 498 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A R RD+ ++ + + +AF ++ F G+AGA FA S+ ++PD +++ Sbjct: 499 GYALRASRDSALRADAIGIDVRRIQWTAFVIAGLFAGLAGALFAFSKGGVAPDAMSVTKS 558 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + + +V+LGG+ +L+ A + + Y+ LM Sbjct: 559 VDALVMVLLGGVQTLAGPVVGAAAFTWLHDTVARNTEYWRA---------------LMGA 603 Query: 327 ALFLVILMRSHSLLR 341 + +++L+ + Sbjct: 604 TMLILVLLAPQGIAG 618 Score = 59.5 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 17/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96 + + + + GLS++ G ++ Y +GA+ + + W + Sbjct: 10 LLNGLASASSLFLVSVGLSLIFGVTRTINFAHGSFYMLGAFIAYSSVDLLSPHIGFWPAL 69 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + GA G + L+ + L+ + ++ G Sbjct: 70 LLAPLACGALGALTETLLLRRIYKAPELFQLLATFALVLVIKDAALWLWGP--------- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 R+ + + +++ + + L L RT R + Sbjct: 121 -EELFGPRAAGLEGSVEILGRQFPTYDLFLIAVGPCVLLGLTLLLTRTRFGTLVRAATQD 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + + FA+ + G+ GA +V++G Sbjct: 180 REMVGALGVNQAWLFTAVFALGTLLAGLGGALQLPREPA--SLEMDMLTIGAAFVVVVVG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM S+ A ++ EL + + + SF+ + + + +V++ R Sbjct: 238 GMGSIPGAFIAALLVA---ELKAVCIWLGVQEIAGLELSFSKLTLVVEFLVMAVVLIWRP 294 Query: 337 HSLLR 341 LL Sbjct: 295 WGLLG 299 >gi|260655477|ref|ZP_05860965.1| high affinity branched-chain amino acid ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] gi|260629925|gb|EEX48119.1| high affinity branched-chain amino acid ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] Length = 351 Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 109/313 (34%), Gaps = 7/313 (2%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y+ + + + + A L++V G G+ SL AIGAY IL Sbjct: 36 DRYVVRVVNLVAVNAILALSLNLVYGFAGMFSLGHAGFMAIGAYVSAILIISPAQK--AA 93 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + + ++ + + A + + + + + G R Sbjct: 94 MYILEPMMWPFNVMQAPFFVSVLAGGVIAALVSLVIALPVLRLGGDYLGIATLGFAEIIR 153 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + T + + Y ++ + +I+ L + N + +RD Sbjct: 154 VVLTNITPVTNGALGLKGIPAYADLFWNYVWMII----TVYVIVKLLSSNFGNTIKAVRD 209 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A ++ ++ AF + + F G+ GA + I P MF F ++ IV+ Sbjct: 210 DEVAARAMGINTFRVRVIAFVIGAFFAGVGGALQGSLITTIDPKMFNFQLTFNILMIVVA 269 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S++ AI+ ++E + L + + L L+IL R Sbjct: 270 GGLGSITGSMVGAAIITVLLEWLRFVENPMTIGSLTIP-GIPGMRMVIFSVVLLLIILYR 328 Query: 336 SHSLLRLRTPSNF 348 ++ S Sbjct: 329 RQGIMGNWEFSWE 341 >gi|296129817|ref|YP_003637067.1| inner-membrane translocator [Cellulomonas flavigena DSM 20109] gi|296021632|gb|ADG74868.1| inner-membrane translocator [Cellulomonas flavigena DSM 20109] Length = 328 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 118/316 (37%), Gaps = 8/316 (2%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +G + Y + A GL+I G GL+++ +GAY + I + +WL V+ + Sbjct: 15 LGPTAIAYALAAIGLNIHFGLTGLINMGQAGFMLLGAYGFAIATIQGAP-LWLAFVVAIV 73 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159 + +++GLP+LK RGDYLAI T+ +EI + I +T G G+ Sbjct: 74 AAVVFALLLGLPTLKLRGDYLAIVTIAAAEIVRMIGRSTALTDVTGGSEGLTGNAFKGTF 133 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI----ILWLRRTAISNAWRTIRD 215 + + + L + + + + L R+ + IR+ Sbjct: 134 QDASPFPDARWSLGPITLATNTSNSWWLRIVGWSLVLLACLLVWRLVRSPWGRVLKGIRE 193 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A SL + KL A + F + G F + D +I++L Sbjct: 194 DEDAVRSLGKNVYGYKLQALVLGGVFGALGGIVFVL-ASSVQADSLGRPVTFNTWTILLL 252 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ + + G + G + + L+ + L L+I+ R Sbjct: 253 GGAATVFGPVLGSLLFWGALVFVRGFLRGVVPADVLSVQQIEQIGWILVGVTLMLLIIFR 312 Query: 336 SHSLLRLRTPSNFLER 351 +L + R Sbjct: 313 PQGILGDKKELAINAR 328 >gi|332670344|ref|YP_004453352.1| inner-membrane translocator [Cellulomonas fimi ATCC 484] gi|332339382|gb|AEE45965.1| inner-membrane translocator [Cellulomonas fimi ATCC 484] Length = 328 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 63/310 (20%), Positives = 119/310 (38%), Gaps = 8/310 (2%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 Y + A GL+I G GLL++ +GAY + I +W + V+ + Sbjct: 18 TTAAYALAAIGLNIHFGLTGLLNMGQAGFLLLGAYGFAIATIAGWP-LWAAVLVAIAAAT 76 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-----LIKWKPITNGKAGIYVADRLYFL 159 +I+G+P+LK RGDYLAI T+ +EI + + L ++G G Sbjct: 77 VFALILGIPTLKLRGDYLAIVTIAAAEIVRLVGRSTALTDLTGASSGLRGNQYKYSFQDA 136 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVL-LGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + + ++ G+ L+ ++ L R+ + IR+++ Sbjct: 137 SPFPDGTWALGPFEYAVNASNSWWVRIVGWGVVALACLLVWLLVRSPWGRVLKGIREDED 196 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A SL + K+ A + +AG + + PD S + +I++LGG Sbjct: 197 AVRSLGKNVYSYKMQALVLGGVIGSLAGILYVLP-RAVQPDSMGRSMTFFIWTILLLGGA 255 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ + I V+ L + + ++ +AL L+I+ R Sbjct: 256 ATVFGPVLGSIIFWAVLALVKLTLREVVPTTVLRSEQIEQFGWIVVGVALMLLIIFRPQG 315 Query: 339 LLRLRTPSNF 348 +L + Sbjct: 316 ILGDKKELAI 325 >gi|91779437|ref|YP_554645.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692097|gb|ABE35295.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia xenovorans LB400] Length = 646 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 70/336 (20%), Positives = 147/336 (43%), Gaps = 33/336 (9%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L K L LA + L+L L A + Y+ + ++ILI V+FA L ++G G+ Sbjct: 313 TPLRPAGKRLKWLAAIALLVLVLAPLAANAFPYMPVLLVEILIAVLFATSLHFIMGPGGM 372 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 S + +GAY + L + + + +++ A ++ G ++ G YLA+ Sbjct: 373 HSFGHAAYFGLGAYGAALFLKVLDLPMEAALLLGPLLAVAGALVFGWFCVRLSGVYLAML 432 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++I +++ +W +T G GI +PS+++ + YY Sbjct: 433 TLAFAQIVWSVVFQWDDVTGGSNGI------------------LGLWPSNWLSSPVAFYY 474 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + L + ++ + + + A R RD+ ++ + + +AF ++S F G+A Sbjct: 475 LTLACVVVGVWLLRKMLFSPLGYAMRASRDSMLRAEAIGIDVKRVQWAAFVIASLFCGLA 534 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G+ +A S+ ISP++ S ++ + +V+LGG+ +L+ A+ + + Y+ Sbjct: 535 GSLYAFSKGTISPEVISVSRSVDGLVMVLLGGLQTLTGPIVGAAVFTWLQDTVARQTDYW 594 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ A+ L+++ ++ Sbjct: 595 ---------------QALLGFAILLLVIAFPQGIVG 615 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 92/307 (29%), Gaps = 18/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + + A GLS++ G +++ Y G AYS W Sbjct: 9 LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYVAYSIASRFGHTAGGFWFS 68 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +A++ G ++ + L+ + L+ + I G ++ Sbjct: 69 VLAAALVVAVLGALVEMLVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPEDLFGPRA 128 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +++ + + L RT R Sbjct: 129 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + F V + G+ GA +V++ Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A I+ + LC G+ ++ S + + + +V+++R Sbjct: 237 GGMGSIPGAFIAALIIAEIKALCIGIGH---VTIFGVGLSLSRFTLVAEFVVMAVVLVVR 293 Query: 336 SHSLLRL 342 LL Sbjct: 294 PWGLLGR 300 >gi|27381345|ref|NP_772874.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354512|dbj|BAC51499.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 332 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 121/323 (37%), Gaps = 28/323 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ P+ + L + ++ + +LIY + G +++ G GLLS + GAY Sbjct: 26 VLLPIAVLAVLPWLLPSQ---ALAVNVLIYGVVVMGYNLLFGYTGLLSFGQAAFFGAGAY 82 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 I RYG+ + +P++ ++S +G+ S + RG Y ++ TL ++++ + ++ Sbjct: 83 FTGIAIGRYGVPWFAAVPIAVLLSTCLAAAIGIVSTRTRGIYFSMVTLALAQLVYYVALQ 142 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G+ G S + I YYVL+ L+ Sbjct: 143 ASSFTGGENG----------LRGFTVDRINLFGLSVNFLDPINKYYVLMVFAALALWFQS 192 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + IR+N++ + + +KL F +S A + G A + D Sbjct: 193 RILNSPFGAVIEAIRENEQRARACGYDVERSKLIVFMLSGAISSLGGCMLALHLSIVPLD 252 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + + +++ +V+LGG S A + + ++ ++ Sbjct: 253 ILHYQTSGMIVMMVLLGGARSFFGPFVGAASFLILEDVISLWTPHW-------------- 298 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 + L +L + Sbjct: 299 -QIFVGAIFVLFVLFLPKGIWGT 320 >gi|304391521|ref|ZP_07373463.1| inner-membrane translocator [Ahrensia sp. R2A130] gi|303295750|gb|EFL90108.1| inner-membrane translocator [Ahrensia sp. R2A130] Length = 401 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 126/366 (34%), Gaps = 34/366 (9%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKY------IDSMGIQILIYVMFAWGLSIVVGS 62 + +IL L+A++ F + + +I+ +FA G +I+ G Sbjct: 6 ARDLQILLLVAILTMFAPFFLNPFPVDSSLAQFNAGYPDLMQRFVIFGIFAIGFNILFGL 65 Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G LS G+Y+ + + ++I I +S +++G + +G SL+ G Y Sbjct: 66 TGYLSFGHAAFLGAGSYAAIWMMKLLTMNIIPAITLSIIVAGLFSLAVGYISLRRSGIYF 125 Query: 123 AIATLIMSEI----FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS---- 174 +I TL +++ ++L G R+ R F Sbjct: 126 SILTLAFAQMSYSLAYSVLTPITGGETGLQPKSNDPRILDGALEPGEQARASLFGMEMSS 185 Query: 175 -------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 +V YYV + +S + + R+ R ++ NQ + Sbjct: 186 SYELVVSGWVFTFNVGYYVAAFLMLVSFYASIRIFRSPFGLMLRAVKSNQNRLGYTGVSA 245 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 L+AF +S + G+AG A + + ++ + V+ + ILGG +L Sbjct: 246 RPYNLAAFVISGMYAGLAGGLMVAMDTQAGAERMFWTASGEVVLMTILGGAGTLIGPVLG 305 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSF-------------NMRHTTLMVIALFLVILM 334 ++ + + +N S + F + + LV++ Sbjct: 306 AGMIKYMENIISKINQSVLESWFAWAPDFLQDFIVAVIYPFVGKGWHLTLGLMFMLVVIF 365 Query: 335 RSHSLL 340 L+ Sbjct: 366 LPGGLM 371 >gi|307728868|ref|YP_003906092.1| urea ABC transporter permease UrtB [Burkholderia sp. CCGE1003] gi|307583403|gb|ADN56801.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. CCGE1003] Length = 548 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 80/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + +++ Sbjct: 274 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRMAPGAVDWYPLVAVPASFAAAALVGIV 333 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 334 IER--LVLKHLYGRPLETLLTTFGISLILIQATRMLFGAQNVQVVNPSWMSGGVTVLPGL 391 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 392 ILPYNRLAILAFALIVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 451 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L V + Sbjct: 452 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKA 509 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 510 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 547 >gi|77463871|ref|YP_353375.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77388289|gb|ABA79474.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 642 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 97/303 (32%), Gaps = 26/303 (8%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISG 104 IY + A GL+I G + ++++ +GAY+ + S Y +SI + +P++ ++ Sbjct: 361 IYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWISDYTISILVALPLAFAVTF 420 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 A G+ M + + TL+ + L + G + Sbjct: 421 AAGVAMERLVI-RHLYRRPLETLLATFGISIALQQLAKNIFGTQARPLTAPA-------- 471 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + + V + + + + RT + R + N S+ Sbjct: 472 -WLDGALSFNDVVSISYIRIAIFVLAMIFLGVFLFIMTRTRLGLEVRAVTQNPSMAASMG 530 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + F + S G+AG S + V++GG+ ++ Sbjct: 531 INPDRINMLTFGLGSGIAGIAGVAIGLFAKVTSELGQDYIVQS--FMTVVVGGVGNIWGT 588 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 A++ GV + +N + + F + R ++ L+ Sbjct: 589 LAGAAMIGGVQKGIEWLNPSNTLAAQTYMILFIIIFIQF-----------RPRGIVALKG 637 Query: 345 PSN 347 + Sbjct: 638 RAA 640 >gi|315651969|ref|ZP_07904971.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] gi|315485798|gb|EFU76178.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] Length = 319 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 79/335 (23%), Positives = 145/335 (43%), Gaps = 44/335 (13%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +++NK I ++ ++ L+F+ + + + S+ + I + +M A L++V G LG Sbjct: 1 MKVNKKTIINIVIMLLAYALVFVLINSGVLSRQYKSLIVPICVNIMLAVSLNLVTGFLGE 60 Query: 66 LSLNCVIAYAIGAYSYVI------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 LSL +IGAYS + L+ + + + + G ++G+P L+ RG Sbjct: 61 LSLGHAGFMSIGAYSSALLSIALSNTFPPVLAFFTALICGGISAAFFGFLIGVPVLRLRG 120 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +I + IT G G+ Sbjct: 121 DYLAIVTLAFGEII-KSIINYLKITGGSKGLSKIPLYSDYKN------------------ 161 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + V+ + ++ +I L + A ++IRDN A S+ I K+ AF +++ Sbjct: 162 ----FTVVFVIMVITIVLISNLIDSRDGRAIKSIRDNDIAAESIGINISRYKVMAFVIAA 217 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 F G+AGA +A + I P +F ++++I ++ V+LGGM ++ + IL + E Sbjct: 218 GFAGIAGALYAHNVGIIKPGIFDYNKSIEILVFVVLGGMGNIPGSIISAIILTLLPEFLR 277 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 G + L I L ++++ Sbjct: 278 G---------------ADNLRMLLYAIVLIVMMIF 297 >gi|292670003|ref|ZP_06603429.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] gi|292648304|gb|EFF66276.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] Length = 316 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 68/334 (20%), Positives = 131/334 (39%), Gaps = 41/334 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L K D + ++A+V ++ A + I + ++ A L+++ G G S Sbjct: 4 LQKNDLKMLIVALVIYAVIMGLTEAGMLSAFWQLNLIFAGLNIILAASLNLINGYTGQFS 63 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L A+GAY V+L + + + + + + +G G ++GLP+L+ RGDYLAIATL Sbjct: 64 LGHAGFMAVGAYVGVVLTTNFQMPFPVALLAGGVSAGLLGALIGLPTLRLRGDYLAIATL 123 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + EI + ++I + I + + + Sbjct: 124 GLGEIVRIVIINVPYVGGAA--------------------------GFKGIQHLTNFTWV 157 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + II + A IR+N+ A S+ K+ AF + + F G+AG Sbjct: 158 FFIMLAALFIIKNFVNSRHGRACLAIRENEIAAESMGIYTTKYKVLAFTIGAFFAGVAGT 217 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F + +SP F F ++ ++ +V++GG+ S++ ++ + Sbjct: 218 LFGHNMYILSPASFTFMQSFNILIMVVMGGLGSMTGSIAGALVVTFLSAALASF------ 271 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +AL L++ R L Sbjct: 272 ---------PNARMIIYALALILLMFYRPQGLFG 296 >gi|220922013|ref|YP_002497314.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219946619|gb|ACL57011.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 339 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 110/302 (36%), Gaps = 25/302 (8%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ + +LIY ++A G +++ G GLLS + GAY I GL L + + Sbjct: 51 ALAVNVLIYGLYAVGYNLLYGYTGLLSFGHAAFFGTGAYFTGIAIGAVGLHPLLAMGLGT 110 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + + + +G S++ RG Y A+ TL ++++ ++ T G+ G Sbjct: 111 VAASGLALAVGAVSIRSRGIYFAMVTLALAQLVYYAALQASSWTGGENG----------L 160 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 S ++ + Y +L + S+I + + A IR+N+ Sbjct: 161 RGFTVSRIDLGPVSLDILNPLVKYLFVLAFVGGALSMISRILASPFGAAIEAIRENEIRA 220 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + +KL AF +S F G++GA A + D + + + + + ++GG + Sbjct: 221 RACGFDVERSKLLAFVLSGLFCGLSGALSAIHLSIVPLDSLAYHTSGMAVVMTLVGGAGT 280 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + ++ L +L LL Sbjct: 281 FFGPFVGA---------------LVVLVLEDVLSLWTSHWQLVLGTVFILFVLFLPRGLL 325 Query: 341 RL 342 Sbjct: 326 GT 327 >gi|319796337|ref|YP_004157977.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315598800|gb|ADU39866.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 354 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 132/328 (40%), Gaps = 17/328 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + +V L+ F+ + S ++ ++ LI + A GL+I+VG G +SL A+ Sbjct: 27 IAMLVLLLVAFIVVPLGVSDYWMRAILTPFLILSLAALGLNILVGYCGQISLGTGAFMAV 86 Query: 77 GAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ R + + + + + G++ G+PSL+ +G YLA+ATL Sbjct: 87 GAYAAYNFQVRIDGMPLIASLLLGGLCATVIGVLFGIPSLRIKGLYLAVATLAAQFFTDW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ + ++ + + + Y L + A Sbjct: 147 AFLRIQWF-------------TNNSSSGSVSVAGLNVFGVPIESPVQKYLFCLIFVVVFA 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254 + L R+AI W +RD A + ++AKL+AFAVSS +G+AGA + Sbjct: 194 LLAKNLVRSAIGREWMAMRDMDVAAAVIGIRPVYAKLTAFAVSSFIVGVAGALWGFIHLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 P F + ++ +VI+GG+ S+ A ++ + + + Sbjct: 254 AWEPAAFSIDRSFQLLFMVIIGGLGSIMGSFFGAAFIVLLPLFLNQL--PAWLGFSISTA 311 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + T + + +++ H L RL Sbjct: 312 LASHLETMIFGALIVFFLIVEPHGLARL 339 >gi|300712468|ref|YP_003738281.1| inner-membrane translocator [Halalkalicoccus jeotgali B3] gi|299126152|gb|ADJ16490.1| inner-membrane translocator [Halalkalicoccus jeotgali B3] Length = 367 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 120/306 (39%), Gaps = 22/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + ++ ++L++ + A L V G GLLS + G Y+ IL + +++ Sbjct: 56 PFWLNLLTRMLVFALLALSLDFVFGYAGLLSFGHAAMFGAGGYAAAILVREVTSNALVVL 115 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++A+ +G S++ +G Y A+ TL +++F I+ P + Sbjct: 116 PLAALSGVVVAGFIGWFSVRAKGIYFAMLTLAFAQMFYVIVFTDLP------ARLLGAEA 169 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G I + + +Y+ L + LS ++++ + + + IR+N Sbjct: 170 ITGGDDGLFGIPLYEAVGIDFTSRLLYFYLALVLVMLSFALLVRVANSPFGRTLQGIREN 229 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ L + KL AF++S F G+AG + + P + ++ + ++ +++LG Sbjct: 230 EERMRFLGYNVRRYKLVAFSISGGFAGLAGGLYVPFQSVAQPGLLHWTISGELVVMLLLG 289 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM +L A +I + E ++ +V++ Sbjct: 290 GMGTLWGPMLGGAFVIYLEERLAEFA----------------TWEIILGSVFVIVVIFAP 333 Query: 337 HSLLRL 342 L Sbjct: 334 QGLAGT 339 >gi|253580173|ref|ZP_04857440.1| inner-membrane translocator ABC transporter [Ruminococcus sp. 5_1_39B_FAA] gi|251848692|gb|EES76655.1| inner-membrane translocator ABC transporter [Ruminococcus sp. 5_1_39BFAA] Length = 333 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 71/326 (21%), Positives = 137/326 (42%), Gaps = 24/326 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L++ + + + + + +Y++ A L++ VG LG LSL IG Sbjct: 1 MVLAAYLIVQGMIAGNLLSNLMQGLLVPLCVYIILALSLNLTVGILGELSLGHAGFMCIG 60 Query: 78 AYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 A++ ++ + + A+ +G G ++G+P L+ +GDYLAI TL Sbjct: 61 AFTSAAFTKATMDTFTNAGLRFFVALIIGAVCAGIFGFLIGIPVLRLKGDYLAIVTLAFG 120 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 EI +NI+ + + LG + + + + + Sbjct: 121 EIIKNIINVLYVGIDSNGIHFSMKDQMSLGMEPGGKMIISGAMGITGTPRQSTFTIGVIL 180 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 ++ ++L L + A IRDN+ A S+ I KL AFA+S+A G+ G +A Sbjct: 181 ILVTLFVVLNLINSRDGRAIMAIRDNRIAAESIGIDITKYKLKAFAISAALAGIGGVLYA 240 Query: 251 ASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + ++ P F ++ +I+ + V+LGG+ ++ A IL + EL G++ Y Sbjct: 241 HNLATLTALPKNFGYNMSIMFLVFVVLGGIGNMRGSIIAAVILNLLPELLRGLSDY---- 296 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILM 334 I L +++L+ Sbjct: 297 -----------RMLFYAIVLIVMMLI 311 >gi|226356194|ref|YP_002785934.1| branched-chain amino acid ABC transporter permease [Deinococcus deserti VCD115] gi|226318184|gb|ACO46180.1| putative Branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] Length = 607 Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 5/282 (1%) Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 I + + + WL + +S + G+++GLP LK +GDYLAI TL + Sbjct: 287 AIMVLMSGQANALATGIDPSFFWLFLALSIAAAAIVGVLIGLPVLKLKGDYLAIITLGLG 346 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 E+ + + + G G+ + F +++ + +++ Sbjct: 347 EVIRVLANNLDLYSAGSQGVTPIKSASVPVFDRFAASLGFAPDQHNLLFLYLLVLLVIAA 406 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + L R+ I AW IRD++ A ++ ++ KL AFA ++F G+ G FA Sbjct: 407 V---LIVNIRLDRSRIGRAWIAIRDDEVAAQAMGVPLVKTKLIAFATGASFAGVMGMIFA 463 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A + +SP+ F F+++I V+S+VILGGM S + A++ + ++ Sbjct: 464 AKQTFVSPESFNFNQSIGVLSMVILGGMGSFPGVILGAAVVTLLNLRVLPGIGEATANVS 523 Query: 311 KFDCSFNMRHT--TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 N + L ++L+R LL R + L Sbjct: 524 WIPQQANPGQLQRLIFGAILVAMMLLRPEGLLPSRRRALELH 565 Score = 49.5 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 31/53 (58%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + + + IQI+I+ A GL+IVVG GLL L V +A+GAY + I S Sbjct: 100 ADTSLLDLSIQIMIFAALALGLNIVVGLAGLLDLGYVAFFAVGAYVWGIFASP 152 >gi|311109158|ref|YP_003982011.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310763847|gb|ADP19296.1| inner-membrane translocator 64 [Achromobacter xylosoxidans A8] Length = 324 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 67/319 (21%), Positives = 127/319 (39%), Gaps = 26/319 (8%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 Q Y + +L++ +IV G +SL + +GAY+ +L RYG+S WL Sbjct: 26 DQGYGIRVMTLVLLFAAMGQSWNIVGGLANQISLGHAAFFGLGAYTSTLLLMRYGISPWL 85 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 I + ++ A G ++ LP+++ RG Y A+ATL E+ + I W +T G G+ + Sbjct: 86 GIIAAMAVAAAAGALLSLPTMRLRGHYFALATLAFGEVLRAIANTWASVTGGPVGVSIPF 145 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 +S I YY++LG +++ + + R+ + R ++ Sbjct: 146 SEGLAQMQFKS--------------SIPYYYLMLGAAVITSIVFALISRSRLGYRLRAVK 191 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK--FSENIIVISI 272 N +A + ++ A +S+A +G G +A PD ++ V I Sbjct: 192 ANPQAAEVIGVNTARTRILAAVISAALMGACGTLYAQFIYFFDPDTVFSLVGISVRVALI 251 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 I+GG+ +++ ++I + E+ + + + L+ Sbjct: 252 CIIGGVGTVTGPLIGALVIIPLEEVFNDWLSGHTAGASQLAFGLILIAIILI-------- 303 Query: 333 LMRSHSLLRLRTPSNFLER 351 L L T L R Sbjct: 304 --EPRGLSALWTRLRNLTR 320 >gi|300788983|ref|YP_003769274.1| branched-chain amino acid ABC transporter ATPase/permease [Amycolatopsis mediterranei U32] gi|299798497|gb|ADJ48872.1| fused ATPase and permease components of ABC-type branched-chain amino acid transport system [Amycolatopsis mediterranei U32] Length = 914 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 129/325 (39%), Gaps = 18/325 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + T + I + I L + + L +V G G +SL + + Sbjct: 325 VLVPAIVSTGVGVVVLTATHGSIRAAVITSLTLGVISLSLVVVTGFAGQISLAQLTLAGV 384 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+S L + +G+ ++A+++ G+++GLP+L+ RG A+ T+ ++ + Sbjct: 385 GAFSLSKLSTAWGIPFPFAPVLAAVVAMVIGVVIGLPALRIRGLPAAVVTVALAVALEAF 444 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + G G + F + + + LG+ L+ Sbjct: 445 WFRNTELNGGLDGSKIPPPRLFGLD--------LGIGAGQGYPRLPFALLCLGVLVLAGL 496 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + WLRR+ + A +R N+++ + + K+ AFA+ + G+ GA + Sbjct: 497 GVAWLRRSRLGAAMLAVRANERSAAAAGVDVARTKIVAFAIGAFIAGLGGALLGYQQTVA 556 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +MF + + + L G+T+LS A + G + + LL S Sbjct: 557 DAEMFTAIGGLGLFATAYLAGITALSGGVVAGVMGAGGLLVV----------LLDRALSL 606 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 ++ +M I L L ++ L+ Sbjct: 607 GEWYSVIMGIGLVLTVITNPEGLVG 631 Score = 56.8 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 83/287 (28%), Gaps = 7/287 (2%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 ++ A L + S G+++ AY+Y L L +P + ++ Sbjct: 16 AVFGALAMALVLTYRSSGVVNFATGAIALYSAYTYAFLRKGEMLVPIPGLPKTIVLGPPL 75 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD-----RLYFLGT 161 G++ G + + + R+ Sbjct: 76 GLVPAAAISVGLGAGFGVVLYGLVFRPLRSAPPVAKAVASIGVMLAIQAVLAARVGTAPV 135 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 +VR ++ + + + L+ + L R T A R + +K Sbjct: 136 SVRPVLPNDAVDWAGTRIPGDRLWFAAVVVVLTVVLALVFRLTKFGLAARAAAETEKGAL 195 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 + ++ +A+SSA G+AG A + + ++ ++G T+L Sbjct: 196 VSGLSPERIAVANWALSSAVAGLAGILIAPIVPLVPIS--YTLFIVPALAAALVGNFTAL 253 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 A ++ + + + ++ + + Sbjct: 254 VPAVGAGLVIGMLQSELQFLQGKWTWLPQTGMTQLVPLAVIVVYLVV 300 >gi|187919043|ref|YP_001888074.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] gi|187717481|gb|ACD18704.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 646 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 71/336 (21%), Positives = 147/336 (43%), Gaps = 33/336 (9%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L K L LA + L+L L A + Y+ + ++ILI V+FA L ++G G+ Sbjct: 313 TPLRPAGKRLKWLAAIALLVLVLAPLAANAFPYMPVLLVEILIAVLFATSLHFIMGPGGM 372 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 S + +GAY + L + + + +++ A ++ G ++ G YLA+ Sbjct: 373 HSFGHAAYFGLGAYGAALFLKVLNLPMEAALLLGPLLAVAGALVFGWFCVRLSGVYLAML 432 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++I +++ +W +T G GI +PS+++ + YY Sbjct: 433 TLAFAQIVWSVVFQWDDVTGGSNGI------------------LGLWPSNWLSSPVAFYY 474 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 V L + ++ + + + A R RD+ ++ + + +AF ++S F G+A Sbjct: 475 VTLVCAVIGVWLLRKMLFSPLGYAMRASRDSVLRAEAIGIDVKRVQWAAFVIASLFCGLA 534 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G+ +A S+ ISP++ S ++ + +V+LGG+ +L+ A+ + + Y+ Sbjct: 535 GSLYAFSKGTISPEVISVSRSVDGLVMVLLGGLQTLTGPIVGAAVFTWLQDTVARQTDYW 594 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ A+ L+++ ++ Sbjct: 595 ---------------QALLGFAILLLVIAFPQGIVG 615 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 18/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + + A GLS++ G +++ Y G AYS WL Sbjct: 9 LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYVAYSIASRFGHTTGGFWLS 68 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +A++ G ++ + L+ + L+ + I G ++ Sbjct: 69 VLAAALVVAVLGALVEMVVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPEDLFGPRA 128 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +++ + + L RT R Sbjct: 129 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + F V + G+ GA +V++ Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A I+ + LC G+ ++ S + + + +V+++R Sbjct: 237 GGMGSIPGAFIAALIIAEIKALCIGIGH---VTIFGVGLSLSRFTLVAEFVVMAVVLVVR 293 Query: 336 SHSLLRL 342 LL Sbjct: 294 PWGLLGR 300 >gi|89093716|ref|ZP_01166663.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein [Oceanospirillum sp. MED92] gi|89082112|gb|EAR61337.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein [Oceanospirillum sp. MED92] Length = 385 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 98/348 (28%), Gaps = 33/348 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ LL Y ++ + L Y M A + ++ G G+LSL Sbjct: 24 VILTALASLGNLLMPQDSIFYVSTYTITLLGKYLCYAMLALAVDVIWGYCGILSLGHGAF 83 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +A+G Y + R + LP + D A L++ I Sbjct: 84 FALGGYGMGMYLMRQIGDRGVYGNPELPDFMVFLNWTELPWFWYGFDQFWFAMLMVLLIP 143 Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174 + + + + + + + F Sbjct: 144 GTLAFIFGWLAFRSRVTGVYLSIMTQALTYALLLAFFRNEMGFGGNNGLTDFKDILGFDL 203 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + ++ + L+ I + ++ + IRD + L K+ Sbjct: 204 QSDNTRVALFATTAFLLGLTFIISHKILKSRMGKVIVAIRDGESRARFLGYRTERYKVWL 263 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F S+ G+AGA + I+P F +I ++ V +GG +L ++ Sbjct: 264 FVYSAMIAGIAGALYVPQVGIINPGEFSPLNSIEIVIWVAVGGRGTLIGAIVGALLVNYA 323 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 KF + LV L L+ L Sbjct: 324 KT--------------KFTAIMPDGWLFALGAMFVLVTLFLPQGLVGL 357 >gi|319785082|ref|YP_004144558.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170970|gb|ADV14508.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 363 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 124/337 (36%), Gaps = 9/337 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 IL + + LL + + + I + + V+ GL I +G+ G+LS Sbjct: 29 RRTILTPVLLSLLLLAIALITVMTGSRPFNQTVIDVFVRVILVVGLYIFIGNSGVLSFGH 88 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + +GAY+ L + ++ ++ A+ + + Sbjct: 89 IGFTCLGAYAAAWLTINPMMK------RGSLPGLPEWLLATRLPYWQSATLAALFAALAA 142 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 IF +L++ I A + + + + S+ I + Y++ + Sbjct: 143 LIFGRVLMRLSGIAASIATFAMLAMINTIYSNWESVTGATSSVVGIPIVRVIWPYLIGAV 202 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + + R+ A R RD A + I +L AF +S A +G+ GA A Sbjct: 203 VAIFIAWAHAISRS--GLALRAARDEPTAAAASGIDIPRERLVAFVISGAVMGLGGALMA 260 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 S ++PD F I +S++++GGM SLS +L +++ + Sbjct: 261 HSIGVVTPDTFYLGLTFITLSMLVVGGMGSLSGGVVGVVLLSALIQALRWLEAGVSLGES 320 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F + + + + +++ +R L+ R + Sbjct: 321 TFALPKGV-QEIALGVIMIVILALRPSGLMGNREITL 356 >gi|307705245|ref|ZP_07642112.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus mitis SK597] gi|307621194|gb|EFO00264.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus mitis SK597] Length = 318 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 G S + + + + A++SGA +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSKSPTYGAFFGAMIIGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|295675759|ref|YP_003604283.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. CCGE1002] gi|295435602|gb|ADG14772.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. CCGE1002] Length = 544 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 80/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ + Sbjct: 270 ITYGLIGVINMAHGEFLMIGAYATYVVQNLVQRFAPNAFDWYPLVAIPASFVAAALVGIV 329 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 330 LER--LVLKHLYGRPLETLLTTFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVLPNL 387 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + A L RT + R + N++ + AFA Sbjct: 388 ILPYNRLAILAFSLIVVAIAWAVLTRTRLGLFVRAVTQNRRMAACVGVKTSRVDSYAFAF 447 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L V + Sbjct: 448 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVLGGFGLGLVSKA 505 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 506 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 543 >gi|169831549|ref|YP_001717531.1| inner-membrane translocator [Candidatus Desulforudis audaxviator MP104C] gi|169638393|gb|ACA59899.1| inner-membrane translocator [Candidatus Desulforudis audaxviator MP104C] Length = 334 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 121/338 (35%), Gaps = 35/338 (10%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + V ++ L + + Y + Q +I + A GLS++ G G S+ Sbjct: 8 KRLALYAVGTVAVYAVIKLLVVSGFINPYWQRVLDQAMIITIGALGLSVIFGISGQFSIG 67 Query: 70 CVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 Y IGAY+ ++ + + A ++ ++GLP L+ DYL IAT Sbjct: 68 HAAFYGIGAYTAGLVTKSLGGDVAAFLAALVAGAFMAALVAFLIGLPVLRLTSDYLGIAT 127 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L I + + G I ++ + Sbjct: 128 LGFGIICKVGFDNANKVIPAMGG----------------------ATGMTGIPQVANFDW 165 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + LS + ++A + +R+++ A + I K+ AF G+AG Sbjct: 166 IFLFFILSIILARNFVQSAQGRSCMALREDEVAANVIGINIFKFKMMAFVFGCGLAGLAG 225 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A +A + P F F ++ + IV+LGGM SL+ + ++E + Sbjct: 226 ALYAHRYPFLHPSNFDFLPSVDFLIIVVLGGMGSLTGTIVTAVGWVFLLEALRAV----- 280 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 +F + + L + IL+R + + Sbjct: 281 -----LGMAFMDWRGVIYALILVVTILVRRQGIFGNKE 313 >gi|118470027|ref|YP_891080.1| inner-membrane translocator [Mycobacterium smegmatis str. MC2 155] gi|118171314|gb|ABK72210.1| inner-membrane translocator [Mycobacterium smegmatis str. MC2 155] Length = 324 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 119/323 (36%), Gaps = 27/323 (8%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR---------Y 88 ++ + IY A L++V G G+ L A+ AY+Y+IL Sbjct: 7 FLVGVLTLAAIYAALAMVLNLVAGWAGMWDLGVAGLVAVAAYTYIILTQTRVDTGLVFTP 66 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 G + + I + +++ I+ LPS++ RG+Y I TL +E+ + I +T G Sbjct: 67 GWPMAVGIVGAVLVTAVAAFIVALPSIRLRGEYFLITTLAFAEVIHQLTISESRLTRGTT 126 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G DR + + V I + L +T Sbjct: 127 GFSSIDRPFRDLVPASEYRWVLLALAVAVALVI-------------YLLTNRLAKTPYVR 173 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 R RDN+ SL I+ +L + ++ A IG+ + + P +F + Sbjct: 174 LLRASRDNEAVARSLGKNIVRYRLITYVLAGALIGLITPLYLWHVRSVVPSLFVSELTFV 233 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 V + +++GG+ S A+LI E+ + + + + L+++ Sbjct: 234 VWTALVIGGIASRKGPVIGAALLIVCTEMLTFLQGSAEYAQMLAATRPVILGVLLVLVL- 292 Query: 329 FLVILMRSHSLLRLRTPSNFLER 351 R L+ R+ F ER Sbjct: 293 ----RFRPEGLMSERSAFQFSER 311 >gi|332285833|ref|YP_004417744.1| putative branched-chain amino acid transport system permease [Pusillimonas sp. T7-7] gi|330429786|gb|AEC21120.1| putative branched-chain amino acid transport system permease [Pusillimonas sp. T7-7] Length = 354 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 142/343 (41%), Gaps = 23/343 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + + F+ + S ++ ++ I LI + A GL+I+VG Sbjct: 18 QIFPIRQDR------TFMLGVLIAAFVLVPLLASNYFLQAIFIPFLILSLAAIGLNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G +S+ A+GAY+ G R + + I + + + G++ G+PSL+ RG Sbjct: 72 YCGQISIGSGAFMAVGAYAAWNFGVRIPATPLVIQILLGGVFATLVGVVFGVPSLRIRGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ TL ++ TN + V+ V Sbjct: 132 YLAVTTLAAQFFVDWAFLRIPYFTNYSSSGNVSVPAL-------------SAFGLPVQTP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +L + A + L R AI W IRD A + ++AKL+AFAVSS Sbjct: 179 VQRYLFVLVFVVVFAVLAKNLVRGAIGRQWMAIRDMDVAASVIGIRPVYAKLTAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 IG+AGA +A P F + ++ ++ IVI+GG+ S+ A ++ + L Sbjct: 239 IIGVAGALWAYIHLGSWEPLAFDLNRSLQLLFIVIIGGLGSIVGSFFGAAFMVLLPVLLT 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L + + + +++ H L RL Sbjct: 299 NV--PHLFGLSISVDVASHIEHMVFGALIVFFLIVEPHGLARL 339 >gi|168484845|ref|ZP_02709790.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae CDC1873-00] gi|172042005|gb|EDT50051.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae CDC1873-00] gi|332203905|gb|EGJ17972.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA47368] Length = 318 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ + GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSVGVLNLFYVQILQQIGINIILSVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 GS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 GS + + + V A++SGA +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSKSPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|28379419|ref|NP_786311.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254557557|ref|YP_003063974.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300768675|ref|ZP_07078572.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181637|ref|YP_003925765.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28272258|emb|CAD65169.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254046484|gb|ACT63277.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300493767|gb|EFK28938.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308047128|gb|ADN99671.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 292 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 100/306 (32%), Gaps = 25/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GA+ + + Sbjct: 8 LINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYSLKSLHFNFVAALLS 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I G+I+ + + I LI + +L G + Sbjct: 68 AMVICAVSGVIIEYFAYRPLRHSPRITALITAIGVSFLLENGMSYFVGASARS------- 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ + + +L C L + L ++RT + A R + + + Sbjct: 121 ----FPQAIKVVTYHWGGLRVSNVQLLILGTACLLMILLELIIKRTKMGKAMRAVSVDPE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I P M + I ++GG+ Sbjct: 177 AAQLVGINLNHTISFTFALGSAMAGAAGVLIGLYYNSIDPLM-GMTPGIKAFVAAVIGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + I+ + + + ++ L +++L+ Sbjct: 236 GSVPGASLGGFIIGILETGVQAIG-------------LSAYKDAVVYFVLIVILLVLPAG 282 Query: 339 LLRLRT 344 + RT Sbjct: 283 IFGKRT 288 >gi|307706958|ref|ZP_07643757.1| high-affinity branched-chain amino acid transport system permease LivM [Streptococcus mitis SK321] gi|307617672|gb|EFN96840.1| high-affinity branched-chain amino acid transport system permease LivM [Streptococcus mitis SK321] Length = 318 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 G S + + + + A++SGA +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSKSPTYGAFFGAMLIGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 ITNG AGI + ++ L Sbjct: 141 ITNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|307708904|ref|ZP_07645364.1| branched-chain amino acid transporter, permease protein livM [Streptococcus mitis SK564] gi|307620240|gb|EFN99356.1| branched-chain amino acid transporter, permease protein livM [Streptococcus mitis SK564] Length = 318 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSIGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 G S + + + V A++SGA +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSKSPTYGAFFGAMIVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|289168246|ref|YP_003446515.1| ABC transporter membrane-spanning permease-branched chain amino acid transport [Streptococcus mitis B6] gi|288907813|emb|CBJ22653.1| ABC transporter membrane-spanning permease-branched chain amino acid transport [Streptococcus mitis B6] Length = 318 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 75/325 (23%), Positives = 136/325 (41%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSVGVLNLFYVQVLQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 G S + + + + ++SGA +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSKSPTYGAFFGAMLIGVLLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|294055680|ref|YP_003549338.1| urea ABC transporter, permease protein UrtB [Coraliomargarita akajimensis DSM 45221] gi|293615013|gb|ADE55168.1| urea ABC transporter, permease protein UrtB [Coraliomargarita akajimensis DSM 45221] Length = 551 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 100/314 (31%), Gaps = 37/314 (11%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----------SYVILGSRYGLSIW 93 + ++ ++GL+I G +G++++ AIG Y ++ I +G Sbjct: 262 TGSVLLIVSFGLAITFGLMGIINMAHGEFVAIGGYVTFMVQSFFINTWGIGSGAFGWYFI 321 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +P+S +++ G+++ ++F + L + + ++ I Sbjct: 322 ISLPLSFIVAAGIGLVLEKSIIRFLYRRPLESLLCTWGLSMVMQQCFRLIFGAANVQVNN 381 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 ++ +++ + LR+T + R + Sbjct: 382 PPWLMGNLSIGGFSM-----------SYTRLFIMFLALVVVIMTWFLLRKTNLGLHIRAV 430 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 N+ SL + FA+ + G+ A S+ + + + +V Sbjct: 431 MQNRSMASSLGIPVARVNSMTFALGCGLAALGGS--ALSQIGNVGPLMGQAYIVDSFMVV 488 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++G + +L + + V +L + F + L + Sbjct: 489 VIGSVGNLLGAGLSAMGIGLVDQLLQPSLGPVMGKITVF-------------FVIILFLQ 535 Query: 334 MRSHSLLRLRTPSN 347 R L R+ S Sbjct: 536 WRPGGLFPTRSRSL 549 >gi|269127374|ref|YP_003300744.1| inner-membrane translocator [Thermomonospora curvata DSM 43183] gi|268312332|gb|ACY98706.1| inner-membrane translocator [Thermomonospora curvata DSM 43183] Length = 364 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 70/336 (20%), Positives = 136/336 (40%), Gaps = 13/336 (3%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA + +L + + ++ ++ G+ + + A GL+++ GS G LSL AIG Sbjct: 14 LAGLAAVLAVMVILPFYAEPFLMQAGLFAMAAAIGAIGLNLLTGSTGQLSLGHAFFLAIG 73 Query: 78 AYSY---------VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 AY Y S +GL + ++ ++G G + + + +G YL IA+L Sbjct: 74 AYGYVYFAAEPDSAHHLSGWGLPTPVAAVLAIALAGVAGGLFSPIAGRLKGTYLGIASLA 133 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + I Q+IL +T G G V F + + +++ ++L Sbjct: 134 LIFIGQHILHNAHAVTGGSNGREVPPLEIFGFVFADTPELVVLQVPFRALEKLWFLNLVL 193 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + A I + R A TIRD++ A + + + + F +SS + G+AG Sbjct: 194 LVAA--AWIARGILRGRPGRAMNTIRDHEIAAGVMGVPVARYRGAVFVLSSMYAGLAGVL 251 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYF 306 A + R PD F F ++ ++++++GG+ +++ ++ + L + Sbjct: 252 LALAFQRTVPDYFGFILSLEYLAMIVIGGLGTVAGSIVGAVLVSMLPPLFTRYSDALPLI 311 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L + VIL L+ L Sbjct: 312 AASGSGGLDAAQASRILYGAVVIAVILFLPGGLMGL 347 >gi|72384077|ref|YP_293431.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72123420|gb|AAZ65574.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 339 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 117/297 (39%), Gaps = 15/297 (5%) Query: 46 ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105 ++ + +FA ++++G GLLS + Y + ++ L + V + Sbjct: 30 VVCFALFACAFNLLIGYGGLLSFGHAAMFGGAGYIAAHALKHWNITPELGLVVGTLAGAL 89 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 G MG+ +++ +G Y ++ TL ++++ ++++ T G+ G+ R Sbjct: 90 LGGAMGILAIRRQGIYFSMITLALAQMIYFVMLQAP-FTGGEDGLQGVPR---------- 138 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 F + ++ +YYV+L + + ++ + + I++N+ SL Sbjct: 139 ---GKLFGILPLDNDLVLYYVVLTIAIAALLLLWRVVSSPFGAVLHAIKENESRAVSLGY 195 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + KL AF +S+A G+AG+ + +S + VI + ++GG+ + Sbjct: 196 NVERLKLVAFVISAAIAGLAGSLKVLVLGFETLSDVHWSMSGTVILMTLVGGLGTRWGPI 255 Query: 286 KATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I++ + + + + + T + I +L + + Sbjct: 256 LGALIIVALETKLGDIGHALASLTGIDAFLKLGESVTVVTGILFIATVLFFRNGIAG 312 >gi|227511440|ref|ZP_03941489.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus buchneri ATCC 11577] gi|227085391|gb|EEI20703.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus buchneri ATCC 11577] Length = 319 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 85/340 (25%), Positives = 153/340 (45%), Gaps = 43/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 KY+ I ++ + L+ + +I++M + I I ++ A GL++++G G SL Sbjct: 6 KYNIIWLIIMISGFYLMNTLILIGVINAFIENMLVTISINIILATGLNLIIGFAGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ +L I + ++S +I+G+P+L+ RGDYLAIAT+ Sbjct: 66 HAGFMAIGAYATAIITQTATTPAGFYLSIVIGIVVSILVALIVGIPTLRLRGDYLAIATM 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EI + I+I IT G AGI+ +L T + Sbjct: 126 GAAEIIR-IIINNMKITGGAAGIFNIPQLASWPT-------------------------V 159 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 M ++ II+ + A ++R+++ A ++ + KL+AF + +A +AG+ Sbjct: 160 YTMVCVTTIIIVNFIHSRGGRAVTSVREDEIAAEAMGINVFKWKLAAFTLGAATAAVAGS 219 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A+ ISP+ F E+I ++ IV+LGG+ S++ A A+L + + Sbjct: 220 LHASFLQTISPNDFGIMESISILIIVVLGGVGSITGTFVAAAVLGVLDTVLQ-------- 271 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F + AL L+++ + LL S Sbjct: 272 -------DFGALRMVIYAAALILIMIFKPSGLLGTWELSI 304 >gi|331266744|ref|YP_004326374.1| ABC transporter membrane-spanning permease-high-affinity branched-chain amino acid transport [Streptococcus oralis Uo5] gi|326683416|emb|CBZ01034.1| ABC transporter membrane-spanning permease-high-affinity branched-chain amino acid transport [Streptococcus oralis Uo5] Length = 318 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L + L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNILWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + + + + A+ISGA +++G+P+L+ +GDYLA+ATL Sbjct: 66 HAGFMAIGAYAAAIIGSKSPTYGAFFGAMALGALISGAVALLVGIPTLRLKGDYLAVATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +I +TNG AGI + Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ L R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YLFVVITTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305 >gi|307945066|ref|ZP_07660402.1| inner-membrane translocator [Roseibium sp. TrichSKD4] gi|307770939|gb|EFO30164.1| inner-membrane translocator [Roseibium sp. TrichSKD4] Length = 400 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 127/358 (35%), Gaps = 31/358 (8%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 ++ L V P LL F ++ ++ + + LI+ +FA G +I+ G G LS Sbjct: 14 LVVALVVFAPFLLNPFPDGSELAQFNAGYPDLMQRFLIFGIFAIGFNILFGLTGYLSFGH 73 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G+Y+ V + +++ I +S + +G +++G SL+ G Y +I TL + Sbjct: 74 AAFLGVGSYAGVWMMKLLTMNVVPAIIMSVIFAGLFSLLVGYISLRRSGIYFSILTLAFA 133 Query: 131 EIFQNILIK-WKPITNGKAG--------------IYVADRLYFLGTTVRSLIRFFRFPSS 175 ++ ++ PITNG+ G + + + Sbjct: 134 QMSFSLAYSVLTPITNGETGLQLNLDDPRVLGVSQVGGSIPAANFFGLAMRDSYELVLGN 193 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ YY+ + + + + + R+ R ++ NQ L+AF Sbjct: 194 WLFTFNAGYYLCAVVMIAAFYVSVRIFRSPFGMMLRAVKSNQNRMNFTGLNSRPYTLAAF 253 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S + G+AG A + +++ + V+ + ILGG +L + Sbjct: 254 VISGMYAGLAGGLMVAMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYCE 313 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLVILMRSHSLL 340 + +N + I L+++ ++ Sbjct: 314 NIFSKINDNILYQWFSALPDAVADFLVFIIHPFIGKGWHLTLGIMFMLIVIFLPGGIM 371 >gi|295111506|emb|CBL28256.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Synergistetes bacterium SGP1] Length = 338 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 122/340 (35%), Gaps = 52/340 (15%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L ++ +L+ L Y + + I +M L++V G G + + Sbjct: 11 AALVFLFYVLVTLLRSMRVLNAYYIQVMMFAGINIMMTASLNLVNGFTGQFCIGHAGFMS 70 Query: 76 IGAYSYVILGSRYGL-----------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +GAY ++ + L + ++ G ++GLPSLK +GDYLAI Sbjct: 71 LGAYGAAVVTTIVFHGKSIPAAAHVPVFLLSLLTGGCVAALVGALIGLPSLKLKGDYLAI 130 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL EI + IL + G G+ Sbjct: 131 VTLAFGEIVRAIL-RLIQPIGGARGMIGIP-------------------------NYSNL 164 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 +L ++ ++ L + A+ IRD++ A ++ K+ +F +++ G+ Sbjct: 165 AWILFFVTVTLYLLRNLIYSPYGRAFLAIRDDEIAADAMGINTTRYKIISFCIAAFIAGV 224 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG +A I PD F F+++ + + GG SL+ +L + E+ + Sbjct: 225 AGGLYAHVLAFIQPDSFSFTKSSDFLVYLYAGGSGSLTGSVLGATLLTVLPEILRFLAD- 283 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + L +V+L RS L + Sbjct: 284 --------------WRLAVYAVILVVVMLYRSEGLCGGKE 309 >gi|146343566|ref|YP_001208614.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146196372|emb|CAL80399.1| putative branched-chain amino acid ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 315 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 127/328 (38%), Gaps = 29/328 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + VV L+L +I ++ +I+I + A L++++G G++S Sbjct: 10 VVAIIVVAGLVLLPVYSNLTGNIFILTLFTRIVILALAAVSLNLIMGYGGMMSFGHAAYL 69 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y+ IL S W V+ +S +++G SL+ RG Y + TL +++ Sbjct: 70 GIGGYAVGILAQEGIASGWAQFAVAIAVSALYALVIGALSLRTRGVYFIMITLAFAQMAY 129 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + R + + YY+ L Sbjct: 130 YVASGLARYGG--------------DDGLTVYKRSDFGGLINLGNRVQFYYLCLACLLAV 175 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ + + + +R N++ ++ KL+ F ++ G++GA A + D Sbjct: 176 VVLVWRIVNSRFGLVLQGLRSNEQRMQAIGFPAKRYKLACFVIAGMLCGLSGALLANNTD 235 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP + ++ + ++ +VILGGM +L + + + + E+ + Y+ Sbjct: 236 FVSPAVMYWTRSGDLMVMVILGGMGTLMGPVVGSVVFLVLEEVLSQLTEYW--------- 286 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 +M L L++L ++ + Sbjct: 287 ------ALIMGPLLLLIVLFGRGGIMGM 308 >gi|222479518|ref|YP_002565755.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] gi|222452420|gb|ACM56685.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] Length = 359 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 71/340 (20%), Positives = 134/340 (39%), Gaps = 24/340 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L LLA + L G +M I LI+ A +I+ G G S + Sbjct: 30 LILLAAMPFLRQLALFGYAPLGWLSLNMLIITLIWATTAQAWNIMSGYTGQFSFGHAAFF 89 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEI 132 +GAY+ +IL +G+S W+ + + ++++G G+++G + G Y A+ATL +E+ Sbjct: 90 GLGAYATIILTGTFGISPWIGMLLGSVLAGIYGLLIGALTFRYDLEGHYFALATLAFAEL 149 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + + + F R + ++ YY++LG Sbjct: 150 LRYVFTNVPQLGGASG---------FFRPLAREYADGPGLAAFQFTGDLPYYYLILGFLT 200 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + + L + R+ + IR+ ++A ++ KL A AVS+ F GAF+A Sbjct: 201 VVTVVSLAINRSQLGYYLFAIREREQAAAAIGVPTYRYKLLAVAVSAFFTAWPGAFWAMY 260 Query: 253 RDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + I +F NI ++ I+GG+ ++ + I+I V E Sbjct: 261 FNTIRPTTVFDLLVNIEILLPAIVGGIGTVLGPIVGSFIVIPVSEFVRQ----------- 309 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 S + + + L ++L ++ + L R Sbjct: 310 -SFSVPGLNNAVYGVILIAIVLYSPKGVVSWPSRFVELLR 348 >gi|328542353|ref|YP_004302462.1| branched-chain amino acid ABC transporter permease [polymorphum gilvum SL003B-26A1] gi|326412100|gb|ADZ69163.1| branched-chain amino acid ABC transporter, permease protein, putative [Polymorphum gilvum SL003B-26A1] Length = 360 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 62/336 (18%), Positives = 122/336 (36%), Gaps = 9/336 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 IL + + L+ L + + I I + V+ GL + +G+ G++S Sbjct: 9 RRTILTPVLLSLILVGLALLAFFVESRPFNQTVIDIFLRVILVVGLYVFIGNSGVISFGH 68 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + +GAY+ L + ++ +I A+ I + Sbjct: 69 IGFTCLGAYAAAWLTIPPMMK------RMSLPGLPDWLIQIQLPYWGAAVLAALFAAIFA 122 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 +F +L++ I A + + + + S+ I Y++ + Sbjct: 123 FLFGRVLMRLSGIAASIATFAMLAMINTIYSNWASVTGATSSVVGIPIVRSPWPYLIAAI 182 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + A R RD A + I +L AF VS A +G+ GA FA Sbjct: 183 AM--IFLAWLHAISRAGLALRAARDEPTAAAASGVDIPRERLIAFTVSGAIMGLGGALFA 240 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 S ++PD F I +S++++GGM SLS +L ++++ + Sbjct: 241 HSIGLVTPDTFYLGLTFITLSMLVVGGMGSLSGAVLGVVLLSILIQVLRWLEQGVSVGSS 300 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 F M + I + ++++ R ++ R S Sbjct: 301 TFALPNGM-QEIALGIVMIVILMFRPAGIMGNRELS 335 >gi|322374645|ref|ZP_08049159.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|321280145|gb|EFX57184.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. C300] Length = 318 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L + L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNILWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + + + + A+ISGA +++G+P+L+ +GDYLA+ATL Sbjct: 66 HAGFMAIGAYAAAIIGSKSPTYGAFFGAMVLGALISGAVALLVGIPTLRLKGDYLAVATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +I +TNG AGI + Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ L R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YLFVVITTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305 >gi|121607291|ref|YP_995098.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gi|121551931|gb|ABM56080.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 612 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 70/324 (21%), Positives = 138/324 (42%), Gaps = 30/324 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LAV L+ + Y + + +++M A G++++VG G SL +A G Sbjct: 29 LAVTGIALVAAAAASMAGNDYHLRVLFMVTVHLMCALGMNVLVGYAGQKSLGQAGLFAAG 88 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L +R+G S WL + + +++G CG ++ L SL+ +G YLA+ TL + + ++ Sbjct: 89 AYTAALLTARHGWSPWLALLAAGVVAGLCGALIALASLRAKGPYLAMVTLAFGTMIEKLV 148 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W + G AGI+ L F G + L + + +C L+ + Sbjct: 149 SEWDELFGGAAGIFGIGPLAFGGRPLTHLQW---------------VWFGIALCALTHLL 193 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + I A +++ ++ A S+ + +K+ AF +++ G+AGA A I+ Sbjct: 194 LHNLLQGRIGRALLSLQADEIAAGSVGIGVYRSKVLAFVIAAVTCGIAGAMVAQQNQYIN 253 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 D F+ +I ++ +V+ GG S L + + F + Sbjct: 254 SDFISFNLSIFILLLVLFGGAGS---------------TLGPLLGALLLTLVDAFLAQWP 298 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + L + + + Sbjct: 299 SAQHFVYGALLLFALYLMPQGMAG 322 >gi|168486756|ref|ZP_02711264.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae CDC1087-00] gi|168490838|ref|ZP_02714981.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae CDC0288-04] gi|168492900|ref|ZP_02717043.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae CDC3059-06] gi|225854259|ref|YP_002735771.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae JJA] gi|225858561|ref|YP_002740071.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae 70585] gi|183570277|gb|EDT90805.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae CDC1087-00] gi|183574710|gb|EDT95238.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae CDC0288-04] gi|183576913|gb|EDT97441.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae CDC3059-06] gi|225720757|gb|ACO16611.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae 70585] gi|225723209|gb|ACO19062.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae JJA] gi|301793910|emb|CBW36306.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae INV104] gi|332204760|gb|EGJ18825.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA47901] Length = 318 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ + + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 GSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 GS+ + + V A++SGA +++G+P+L+ +GDYLA+ATL +SEI + +I Sbjct: 81 GSKLPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I + ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|288905951|ref|YP_003431173.1| amino acid ABC transporter permease [Streptococcus gallolyticus UCN34] gi|306831970|ref|ZP_07465125.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978917|ref|YP_004288633.1| branched-chain amino acid transport system permease [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732677|emb|CBI14249.1| putative amino acid ABC transporter permease protein [Streptococcus gallolyticus UCN34] gi|304425896|gb|EFM29013.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178845|emb|CBZ48889.1| branched-chain amino acid transport system permease protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 317 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 135/340 (39%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L VV +L Y + + I I ++ G ++V+G G +L Sbjct: 6 KINLSWLALIVVLFGILEFLATTNILNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ + + + V +I+ ++ G+P+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYATAIITQQNPTYGGFYFSMLVGIVIAVLVALVFGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M+EI + +++ +TNG AG+ V+ Sbjct: 126 GMAEIIRIVIVNGGDLTNGAAGLTGILPYTTWP-------------------------VI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 +IL R++I ++R+++ A ++ + K+ F + + +AG+ Sbjct: 161 FIFVVAITILILNFLRSSIGRQVISVREDEIAAEAMGVNVTRMKVLIFVMGAIISAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + P F ++I + I +LGG+ S++ A +L + + Sbjct: 221 LYVGYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTILAAIVLGILNMFLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL + + Sbjct: 275 ---------SNLRMIIYSLALILVMIFRPGGLLGTKEFTL 305 >gi|167629191|ref|YP_001679690.1| branched-chain amino acid abc transporter, permease protein [Heliobacterium modesticaldum Ice1] gi|167591931|gb|ABZ83679.1| branched-chain amino acid abc transporter, permease protein [Heliobacterium modesticaldum Ice1] Length = 318 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 125/301 (41%), Gaps = 43/301 (14%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 S+ I + ++ A L I + S G +SL AIGAY ++ +G+ +++ + +A Sbjct: 4 SVLIFAGVNIILAVSLYITL-STGQISLGHGAFMAIGAYVASVMTVNFGVHLYIAMMGAA 62 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + SG G+ +G P+L+ +G YLAI TL + E+ + K++ Sbjct: 63 IASGLVGIAVGFPALRVKGIYLAIGTLGLCEVVEVFFHKFEY------------------ 104 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 S F ++ + L L R+ + A++ +++++ A Sbjct: 105 ---------TGAASGFSGMSGTTVPLVWAVAALCILFCWQLSRSRMGWAFKAVKEDEVAA 155 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ I + K+SAF +S+A G+ GA +A I P F + +++++ VI GG + Sbjct: 156 QTMGLNITYLKVSAFGMSAAMAGLGGALYAHYIFFIDPAAFGYHTSLLILFYVIFGGAET 215 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A IL + G+ T+ + + ++ +R L+ Sbjct: 216 FWGAALGALILTVLPTFIRGLEE---------------WRFTVYGLLIMAMMAIRPQGLI 260 Query: 341 R 341 Sbjct: 261 S 261 >gi|296156968|ref|ZP_06839805.1| inner-membrane translocator [Burkholderia sp. Ch1-1] gi|295892854|gb|EFG72635.1| inner-membrane translocator [Burkholderia sp. Ch1-1] Length = 646 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 70/336 (20%), Positives = 147/336 (43%), Gaps = 33/336 (9%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L K L LA + L+L L A + Y+ + ++ILI V+FA L ++G G+ Sbjct: 313 TPLRPAGKRLKWLAAIALLVLVLAPLAANAFPYMPVLLVEILIAVLFATSLHFIMGPGGM 372 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 S + +GAY + L + + + +++ A ++ G ++ G YLA+ Sbjct: 373 HSFGHAAYFGLGAYGAALFLKVLNLPMEAALLLGPLLAVAGALVFGWFCVRLSGVYLAML 432 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++I +++ +W +T G GI +PS+++ + YY Sbjct: 433 TLAFAQIVWSVVFQWDDVTGGSNGI------------------LGLWPSNWLSSPVAFYY 474 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + L + ++ + + + A R RD+ ++ + + +AF ++S F G+A Sbjct: 475 LTLACAVVGVWLLRKMLFSPLGYAMRASRDSVLRAEAIGIDVKRVQWAAFVIASLFCGLA 534 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G+ +A S+ ISP++ S ++ + +V+LGG+ +L+ A+ + + Y+ Sbjct: 535 GSLYAFSKGTISPEVISVSRSVDGLVMVLLGGLQTLTGPIVGAAVFTWLQDTVARQTDYW 594 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ A+ L+++ ++ Sbjct: 595 ---------------QALLGFAILLLVIAFPQGIVG 615 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 18/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + + A GLS++ G +++ Y G AYS WL Sbjct: 9 LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYVAYSMASRFGHTAGGFWLS 68 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +A++ G ++ + L+ + L+ + I G ++ Sbjct: 69 VLAAALVVAVLGALVEMIVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPEDLFGPRA 128 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +++ + + L RT R Sbjct: 129 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + F V + G+ GA +V++ Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A I+ + LC G+ ++ S + + + +V+++R Sbjct: 237 GGMGSIPGAFIAALIIAEIKALCIGIGH---VTIFGVGLSLSRFTLVAEFVVMAVVLVVR 293 Query: 336 SHSLLRL 342 LL Sbjct: 294 PWGLLGR 300 >gi|218886265|ref|YP_002435586.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757219|gb|ACL08118.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 358 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 69/343 (20%), Positives = 134/343 (39%), Gaps = 38/343 (11%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-- 89 +Y ++ + + I ++FA L+IV G +G S +GAY+ +L Sbjct: 23 FNVIDQYTQTVLMFMGINIIFASSLNIVNGYMGEFSCGHAGFMCVGAYASSVLSVVLFTS 82 Query: 90 ---------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + +++ V+ ++S G+++ LPS + RGDYLAI T+ + I Sbjct: 83 NKLVGDALLPPELAPMLFPVVLIVAGLVSSVFGLLVALPSFRTRGDYLAIITIAANYIVI 142 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +++ I G G + R+ ++ +M+ ++ S Sbjct: 143 SVIENL-DIIGGPRGFHGMKRVINGMRD--------------LVDIPWMFIWVILGTLFS 187 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I+ L + + ++ A ++ KL AF VSS G+AGA +A Sbjct: 188 VWILRRLVNSTYGKGISAVCQDEVAAEIMSVDTNHVKLVAFMVSSGLAGVAGALYAHVYG 247 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F ++ + +V LGGM SLS A + ++E + +L + Sbjct: 248 YVNPQAFNILKSTEGLVMVYLGGMASLSGSVMAAILFTLLLESLRFVIPGLDAALHAVNL 307 Query: 315 SFN------MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + L+ + L L++ R ++ R S + Sbjct: 308 LPAGYELSQVWKWVLIPLILILLMQFRPEGIMGNRELSGVFPK 350 >gi|149202460|ref|ZP_01879432.1| inner-membrane translocator [Roseovarius sp. TM1035] gi|149143742|gb|EDM31776.1| inner-membrane translocator [Roseovarius sp. TM1035] Length = 328 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 115/328 (35%), Gaps = 22/328 (6%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +I+ + L + + ++I ++ ++ G SL V Sbjct: 1 MRIVLKPVMFLLGAAALIALPHGLSFSQQEILVFLVINILLVMSYRLLT-LTGEWSLGHV 59 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + +GAY+ ++ G+ + + + + + + +++ P + +G Y I + E Sbjct: 60 VIMGVGAYASALMTKNLGVPVPVGMILGGVTAALLAVLLSFPLFRMKGFYFLIGSFAAGE 119 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + I +++ G GI D + S F + YY + Sbjct: 120 IIRLIWKRFREPFGGARGISGIDPMPDFSLGFYSFDFFE---------PVSYYYFAGTIV 170 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + ++ + ++ + + + K + + + AFA++S F G+AGA A Sbjct: 171 AVCLWVLWRIEKSPVGLTFHAVHWQDKLAQASGVNLRAYRTLAFAIASGFAGIAGALQAH 230 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ++P+ F + V++ I+GG T+ +L + E+ Sbjct: 231 YVGTVNPNSFDIEVMVFVLTWAIVGGTTTFYGPILGCVLLTVINEVVLR----------- 279 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSL 339 F + L IL + L Sbjct: 280 -GMGFEQARPLFYGAIMILSILFLPNGL 306 >gi|86751758|ref|YP_488254.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86574786|gb|ABD09343.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 343 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 131/335 (39%), Gaps = 33/335 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ L+ Y + LI + A L++VVG GL+SL + + Sbjct: 13 ALPAICLIAALALPFVVPVYYVQFASKALILGVLAMALNLVVGQGGLVSLCHAAFFGLAG 72 Query: 79 YSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y ++ +Y S+ L P + + + +++G +L+ RG Y + TL E+ + Sbjct: 73 YVLALMSPKYDAASLLLTWPAAVLAASFAALVIGALALRTRGVYFIMVTLAFGEMLFYLF 132 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + Y+++LG+ + ++ Sbjct: 133 HDADFAGGSDGAFINVKP----------ELVIAGVRLLDLDKPLTFYFLVLGVTVAAIAL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 ++ + R+ +A RDN++ +L I +L AF +S A G+AG A ++ Sbjct: 183 LVTVVRSPFGHALAAARDNERRARALGFPIFRIRLIAFVLSGALSGVAGYLAAVQFGFVA 242 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P M + ++ V+ +V++GG+ +++ +L+G+ E+ ++ Sbjct: 243 PQMLGWHQSATVLVMVLIGGLGTVTGPLIGALVLLGLEEVLKASFEHW------------ 290 Query: 318 MRHTTLMVIALFLVILMRSHS-------LLRLRTP 345 + + + ++L+ + L+ R P Sbjct: 291 ---KLIEGVIVIAIVLLLPNGVRQLWPMLVGDREP 322 >gi|22298665|ref|NP_681912.1| ABC transporter permease protein [Thermosynechococcus elongatus BP-1] gi|22294845|dbj|BAC08674.1| ABC transporter permease protein [Thermosynechococcus elongatus BP-1] Length = 389 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 107/357 (29%), Gaps = 31/357 (8%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 +S FS ++ ++ L+L + + + + + L + A G+ ++ Sbjct: 4 LSQFSFPKDRLSGRELMVVAALALILIFVMPSLL-PGFRLDLLHRYLALAIVALGIDLIW 62 Query: 61 GSLGLLSLNCVIAYAIGAYSYVIL----------------GSRYGLSIWLLIPVSAMISG 104 G GLLSL I +A+G Y+ + S YG++ Sbjct: 63 GFTGLLSLGHGIFFALGGYAIAMHLKLQVPATASSSLPDFMSLYGVTELPWFWYPFYSFT 122 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 + L + ++ I +L+ + Sbjct: 123 FAVAAVVLIPALLGALLGYLVFRNRIRGVYFSILTQAAIIVFYNFFNGQQKLFNGTNGLT 182 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 FP + + Y + + L+ + WL IRD++ Sbjct: 183 DFQTLLGFPVRNAQTQYWFYVLTVIFLALAYLLCRWLTMGRFGRLLVAIRDDEARVRFSG 242 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 K+ FA+S+A G+ GAFF ISP + +I ++ V +GG SL Sbjct: 243 YNPTSYKVLVFAISAALAGIGGAFFTLRTGIISPRAMDIAFSIEMVIWVAVGGRASLIGA 302 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ L F +V+L ++ Sbjct: 303 VLGALLVNFARSLLSE--------------QFADIWLFFQGALFLIVVLALPTGIVG 345 >gi|83943122|ref|ZP_00955582.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] gi|83846130|gb|EAP84007.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] Length = 402 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 129/349 (36%), Gaps = 25/349 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + A + G + + + +I+ +FA G +I+ G G LS + Sbjct: 20 MAAPIILNPFPAGSGLAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGV 79 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G+YS V + +++ I +S +++G +++G SL+ G Y +I TL +++ N+ Sbjct: 80 GSYSAVWMMKLLSMNVIPAILLSVIVAGLFSVVIGFVSLRRSGIYFSILTLAFAQMSFNL 139 Query: 137 LIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP-----------SSFVIYEIFMY 184 PITNG+ G+ +A + + F ++ Y Sbjct: 140 AYSVLTPITNGETGLQIALSDPRILDGANAPSYPNLFGAQMNAATTLDFGAWSFTFSVGY 199 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y+ + L+ I + + R+ R ++ NQ+ L+AF +S + G+ Sbjct: 200 YLCAVIMLLAFYISIRVFRSPFGMMLRAVKSNQQRMNYTGLNTKPYTLAAFVISGMYAGL 259 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG AA + +++ + V+ + ILGG +L + + +N Sbjct: 260 AGGLLAAMDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVLGAGFIKYFENIFSKINDN 319 Query: 305 YFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSHSLL 340 + F + + LV++ L+ Sbjct: 320 VLHGWFAFMPDGLEDTLITLIHPFVGKGWHLTLGLLFMLVVIFLPGGLV 368 >gi|307298793|ref|ZP_07578595.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2] gi|306915218|gb|EFN45603.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2] Length = 342 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 115/335 (34%), Gaps = 9/335 (2%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ L + + L LFL Y + I IY + A L++V G G+ SL Sbjct: 1 MILTLIALPSIALLLFLSQELLNSYYSRIITLIGIYGIMAVSLTLVNGISGVFSLGHAGF 60 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 A+GAY+ +L + + I L A + Sbjct: 61 IAVGAYTSALLTLSPEQKEMTFLIEKLV--WPLNSIQIPFFWATIIAGLVAAVFAFLIGW 118 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 ++ + G R++ L + + + + G + Sbjct: 119 PSLRLTGDYFAIATLGFSEIIRIFALNLNSITN----GALGLKALPDHTNVWWAWGWLLV 174 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + +L L ++ A R IR+++ A ++ + +L+AF + F G++G+ + Sbjct: 175 TVATVLSLAYSSFGRALRAIREDRVAAQAMGINVFKHQLTAFVLGGFFAGISGSLYGHWL 234 Query: 254 DRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 I P + F V+ +++LGG+ S++ A+ + E + K Sbjct: 235 STIDPRTNTFGILLTFNVLIMIVLGGLGSITGAIIGGALFAFLSEWLRFLEGPMNILGFK 294 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + ++++ L+ S Sbjct: 295 I-MGISGMRMLVFSGLFVIIMIFWPRGLMGRSEFS 328 >gi|313679773|ref|YP_004057512.1| inner-membrane translocator [Oceanithermus profundus DSM 14977] gi|313152488|gb|ADR36339.1| inner-membrane translocator [Oceanithermus profundus DSM 14977] Length = 449 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 111/330 (33%), Gaps = 17/330 (5%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + +L L V +L L + + S I I+ + A L+++ G LG+LSL Sbjct: 2 RNTLLTLATVGLAILGLYLLTQAEGSSGLLSALTLIFIWGIAAVSLNLINGQLGILSLGH 61 Query: 71 VIAYAIGAYSYVILGSRYGLSIWL----------------LIPVSAMISGACGMIMGLPS 114 IG Y +L A + I Sbjct: 62 HGFMLIGGYVTALLMLPEKERAPFRTRLLSDWARNHLDLDKWLRGAGLDFIANSIDLKFV 121 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + LA A + + ++ +K + G RL V +L Sbjct: 122 VALFLAGLAAAVVGVIVGAPSLRLKGDYLAIVTFGFGEIIRLLPNAPEVAALTNGP-LGI 180 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + + + + L+ ++ A+ IR+++ A ++ + + K+ A Sbjct: 181 KGIPGDAGTVWWTFFAFLFVLWFLSRLKFSSYGRAFEGIREDEIAAEAMGVNLAYHKVLA 240 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F +S+ F G+AG +A+ + F F ++ + LGG+ S++ TAI++ V Sbjct: 241 FTISAFFAGVAGGLYASYLQSVDTQTFNFFVTFFLLVAISLGGLGSITGAVLGTAIVVLV 300 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + Y + + M Sbjct: 301 RIYGGFLEQPYPAYVGYLGGAVVMLSAFAF 330 >gi|33601270|ref|NP_888830.1| high-affinity branched-chain amino acid transport system permease protein [Bordetella bronchiseptica RB50] gi|33575705|emb|CAE32783.1| high-affinity branched-chain amino acid transport system permease protein [Bordetella bronchiseptica RB50] Length = 345 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 69/322 (21%), Positives = 126/322 (39%), Gaps = 17/322 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LL L L + Y + + I+V A GL+I+ G GL+SL +GA Sbjct: 24 VWLALLLAALALFPFLANAYWLYLACLVAIHVASATGLNILTGYTGLVSLGQAAFMGLGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L G L + + ++ G+++G+PSL+ +G YLAI T+ S I + Sbjct: 84 YTVAVLEVHVGTPALLNLLAAGAVAMLGGLVVGVPSLRVKGLYLAIVTIAASFIAHFLFA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 RL + + +Y++++ + L Sbjct: 144 NLPLTGGTAGLQVPPARLLGMD----------------LDTSFKIYWLIVPITVLMVLGA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT I A+ IRD + L ++ KL +F +SS + G+AG +A ++P Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIDLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F +I ++ +I+GGM S+ + V E + + + Sbjct: 248 ESFPLVMSIFFLAAIIVGGMGSILGAILGAVFMTMVPEFLK-LVVGWLPVGGDALGLLSP 306 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 T + + ++ L Sbjct: 307 VRTIVFGALIVGFLIFEPLGLA 328 >gi|319939593|ref|ZP_08013952.1| branched-chain amino acid permease [Streptococcus anginosus 1_2_62CV] gi|319811182|gb|EFW07488.1| branched-chain amino acid permease [Streptococcus anginosus 1_2_62CV] Length = 316 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 146/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + +L + L+ L + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNILWFVLLLAGYGLIALLVSAGVLNDFYLQILQQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G + + + + + A+I+GA +I+G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAAAIIGSRTATYPAFFAAMVLGALIAGAVALIVGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + ++I +TNG AGI + Sbjct: 126 GVSEIIRILIINGGDLTNGAAGILGIPAFTNWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + + R+ I A ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YFFVVITTILTINFLRSPIGRATLSVREDEIAAESVGVNTTKIKVIAFVFGAMTASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F +I V+ IV+ GG+ S++ A +L + + + Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSMTGTIVAAIVLGILNMVLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 275 ---------ASIRMIIYSLALILVMIFRPGGLLGTWELSL 305 >gi|168335480|ref|ZP_02693566.1| Branched-chain amino acid transport system permease protein livM [Epulopiscium sp. 'N.t. morphotype B'] Length = 337 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 77/331 (23%), Positives = 136/331 (41%), Gaps = 45/331 (13%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 ++ + + +L + + YI + + ILI V+ L++V G LG L Sbjct: 21 KITQRLIYATIAIFAIYFVLIIGMATGLIDNYISGIIVSILINVIMGVSLALVTGYLGEL 80 Query: 67 SLNCVIAYAIGAYSYVILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 L A+GAY+ I+ + + + + +++ A G+I+G+P+L+ RGDYL Sbjct: 81 VLGHAGFMAVGAYTAAIITMQLNLPAVIEFPIALLAGGILASAIGIIIGIPALRLRGDYL 140 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 I TL EI + I++ ITNG G+ Sbjct: 141 GIITLGFGEIIR-IILNNXEITNGARGLSGIPHYSNFT---------------------- 177 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 V + + I+ + + A IRDN+ A + + F K AF++++ F Sbjct: 178 ---VAFFITAIVIVILYKIITSRTGRAIVAIRDNEIATDCVGISTFFYKTLAFSIAAFFA 234 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AG +A ++P F F ++I V+ IV+LGGM +L A IL + EL Sbjct: 235 GIAGGLYAHYHTVLNPVSFGFMQSIEVLIIVVLGGMGNLFGTIIAAIILGVLNELLRSFT 294 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 Y + + L ++++ Sbjct: 295 EY---------------RMIIYSLVLIIMMI 310 >gi|55377506|ref|YP_135356.1| branched-chain amino acid ABC transporter permease [Haloarcula marismortui ATCC 43049] gi|55230231|gb|AAV45650.1| branched-chain amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 382 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 118/337 (35%), Gaps = 25/337 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + + + + + +L VV+ ++ A+ S S+ Q L++ A GL++++ L Sbjct: 18 VEVTRREAVFLVLGVVFLFVIPDI--ASLSDSLQLSVIHQGLLFGFAAVGLNLLLRHTKL 75 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 S + GAY+ +L G+ L+ + A+ + + Sbjct: 76 TSFGHAAFFGTGAYATAVLARYAGVQSVGLLLLGAIAAATVMAAIIGVLSLRHTGLYFAL 135 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + + G G+ V S +Y+I YY Sbjct: 136 LTLAFGQLLYAIALGQSALGGSDGLPVRPGPANQPLLF-------GTAFSPDVYQILTYY 188 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + + + + ++ + ++ NA I + + + +AF +S + G+A Sbjct: 189 LTVVVILIGLFVMYRITQSPFRNALDAIGQERTRARFIGLPVRRYVWAAFVISGIYGGVA 248 Query: 246 GAFFAASRDRISPDMFKFSEN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G FA R + P+ F ++ + ILGG +L +L+ + ++ + Y Sbjct: 249 GGLFAVVRQYVRPEGTLFFLRSGDILFMAILGGFRTLVGPLIGGVVLVFLQDVGQDVTQY 308 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 Y L + L +++ ++ Sbjct: 309 YE---------------FLTGVVLLILVYGFPRGIVG 330 >gi|293365061|ref|ZP_06611778.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|307702229|ref|ZP_07639189.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus oralis ATCC 35037] gi|291316511|gb|EFE56947.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|307624242|gb|EFO03219.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus oralis ATCC 35037] Length = 318 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 142/340 (41%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L + L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNILWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + + + + A+ISGA + +G+P+L+ +GDYLA+ATL Sbjct: 66 HAGFMAIGAYAAAIIGSKSPTYGAFFGAMVLGALISGAVALFVGIPTLRLKGDYLAVATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +I +TNG AGI + Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ L R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YLFVVITTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305 >gi|226357077|ref|YP_002786817.1| branched-chain amino acid ABC transporter permease [Deinococcus deserti VCD115] gi|226319067|gb|ACO47063.1| putative Branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] Length = 336 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 127/326 (38%), Gaps = 24/326 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + Y+ +G+ ++IY M A+G++I++G G L L + IGAY Sbjct: 11 WAALFVAMALFPLLRPSGYLLDIGVNVMIYAMLAYGMNILLGYTGQLPLAHAGFFGIGAY 70 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + IL + G + WL P++ ++ G ++GL + + +GD AI TL + I ++ K Sbjct: 71 TVGILTLKAGWNFWLAWPLAVVLCAVLGWLLGLVAFRTKGDAFAILTLAVGVIIMLVINK 130 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T G G+ + L + + YY+ L L+ ++ Sbjct: 131 WDSLTGGNEGLNGINPPPGLEGLAQG---------LGMKLSGGFYYLALVALALTVLLVA 181 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 R + + IR + S + KL A +S+A G AG +A + Sbjct: 182 RTRASVFGRSLIAIRGGEDLARSAGIDVFQHKLRAMMLSTAIAGFAGGLYAVYVGFLGAA 241 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 V+ +++GG+ +L+ A++ + + G+ Y Sbjct: 242 ATGPVMTFTVLLYLLVGGLGTLAGPLLGPALMYTLTQNLKGLQDY--------------- 286 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTP 345 + L L+++ H + Sbjct: 287 QYLVFGPLLVLLVMFAPHGIAGGWER 312 >gi|300694315|ref|YP_003750288.1| ABC-type branched-chain amino acid transport system, permease component [Ralstonia solanacearum PSI07] gi|299076352|emb|CBJ35665.1| putative ABC-type branched-chain amino acid transport system, permease component [Ralstonia solanacearum PSI07] Length = 322 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 122/325 (37%), Gaps = 24/325 (7%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 +L L ++G ++L+ + A ++ ++G G+LS + +GAY Sbjct: 18 AIWAVLLLAPYWMPMLGGYTALGTRVLVLGLAAMSVNFLLGFTGVLSFGHAAYFGLGAYG 77 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 S L + ++ G G ++G S++ RG Y A+ T+ ++F I +W Sbjct: 78 AGFALKFLAPSTPLALMCGTLLGGIAGALLGALSVRRRGVYFAMVTIAFGQVFYYIAFQW 137 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G G+ R+ + + YY +L L+ ++ + Sbjct: 138 SSLTGGDDGLRGFSRMP---------LDLGFTTLDILSNANAFYYFVLACLALATGLMAF 188 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + + IR+N++ L + AF +S F+G AGA +A + P Sbjct: 189 ILHSPFGHTLIAIRENERRARFLGIPVNRHIWIAFTLSCFFMGFAGALYALLNNFADPRG 248 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 +S++ + + ++GGM S + + + + + + Sbjct: 249 LHYSQSGDFVMMAVMGGMRSFWGPLLGAVVFVVLQDYLSSL---------------TVNW 293 Query: 321 TTLMVIALFLVILMRSHSLLRLRTP 345 + + + ++L LL + Sbjct: 294 MSFVGMLFVAIVLFFPRGLLGVLRR 318 >gi|293605107|ref|ZP_06687499.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292816510|gb|EFF75599.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 299 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 77/305 (25%), Positives = 134/305 (43%), Gaps = 17/305 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ ++ I ILIY++ A+GLS+ G GL++ V +AIGAY+ +L + + + Sbjct: 3 AYLIAIAIGILIYMLLAFGLSLHYGFTGLINFGHVGFFAIGAYTSALLSLKGVPVP-VSM 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +A + +G+ +L+ DYLAI TL SE + IL + +T G G+ RL Sbjct: 62 VAAAAFAALAAYPLGMIALRLGSDYLAIVTLGFSESVRMILQTEEWLTRGMHGLPGIPRL 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + S ++++ +LL + + +I + R+ +RDN Sbjct: 122 FAGWA-------------SPQTVDLWIMVLLLAVNAGALLLIHLVIRSPFGRVIEAVRDN 168 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A +L K + + + G+AGAF A ISP+ F + +ILG Sbjct: 169 EVAVRALGKDPAKFKTRSLMLGAGLAGLAGAFQAHYLTFISPEQFVPLITFYIWIAIILG 228 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ LS + T +L+G +E + + + ++ IAL V+L R Sbjct: 229 GVGRLSGVVAGTVLLVGFLEGSRFVRDFVGGIS---EVQMASVRIGIIGIALICVVLYRP 285 Query: 337 HSLLR 341 L Sbjct: 286 QGLFG 290 >gi|254475559|ref|ZP_05088945.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria sp. R11] gi|214029802|gb|EEB70637.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria sp. R11] Length = 356 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 129/337 (38%), Gaps = 9/337 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 ++ L+ F +I I+V+ +++G G++S + + Sbjct: 15 FLGAILLVILICLAFAPFLFPGVRTVDTAARICIFVVLVASYDLLLGYGGIVSFAHTMFF 74 Query: 75 AIGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IGAY + + G + + A+++ A +++GL SL+ R + A+ TL ++ Sbjct: 75 GIGAYGVALSSTHLGRGFDSLIIGAGIGAILAAALALVIGLFSLRVRAIFFAMITLAVAS 134 Query: 132 IFQNILIKWKPITNGKAG-IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 ++ + +T G+ G + R + + ++ YY++ G Sbjct: 135 AVAVLVSQISSVTGGEDGLTFKIPRELGPAFKFGKDLFGGELLGVKLNGKLLTYYLIFGG 194 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + +L + + + IR+N ++ ++ +++A +S+A +AG+ +A Sbjct: 195 SLILFLTLLRIVNSPFGRVLQAIRENDFRAEAIGYRVVIYRVTATCLSAAVAALAGSLYA 254 Query: 251 ASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYY 305 + PD I ++ +V++GGM ++ + + + L G++ Sbjct: 255 IWLRYVGPDTTLSMEIMIDILLMVVIGGMGTIYGAVIGATLFVLAQNYLQNLMSGLSSMT 314 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + R + + L + ++ Sbjct: 315 EGLPILPELFSPDRWLLWLGVLFILSVYFFPTGVVGR 351 >gi|121609945|ref|YP_997752.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121554585|gb|ABM58734.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 338 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 99/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ IGA + ++ + Sbjct: 37 IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGMMQAALPMAPGW 96 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ +L F + +A L S ++ + + + + Sbjct: 97 VLLLLATISAATVAAALNFTIEKVAYRPLRNSPRLAPLITAIGMSILLQTLAMIIWKPNY 156 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +L+ F +L AS++ + T + A R +N + Sbjct: 157 --KSYPTLLPSTPFEIGGAYITPTQILILGVTVLALASLMYLVNHTNLGRAMRATAENPR 214 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG A++ + M F + + + GG+ Sbjct: 215 VAALMGVKPDMVISATFIIGAVLAAVAGIMHASNYGTVQHTM-GFLPGLKAFTAAVFGGI 273 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G LL + + L +++ +R Sbjct: 274 GNLAGAVLGGILLGLIEAIGAGYIGTLTGGLLG-----SNYTDIFAFVVLIVILTLRPSG 328 Query: 339 LLRLR 343 LL R Sbjct: 329 LLGER 333 >gi|33598593|ref|NP_886236.1| putative branched-chain amino acid transport system permease protein [Bordetella parapertussis 12822] gi|33574722|emb|CAE39379.1| putative branched-chain amino acid transport system permease protein [Bordetella parapertussis] Length = 302 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 111/284 (39%), Gaps = 23/284 (8%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 L+ + L A + +I +G++ Y + GL++ G G +SL + + AY Sbjct: 9 ALCALVLIALPALLNDPFITHLGVRAATYAIVVMGLTLFAGYTGQISLGHAAFFGLAAYL 68 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 ++ + + +A + L+ G YLA+A++ ++ I Q I+ Sbjct: 69 SGMMAKAGVPYLVSVPVATAAVGV--------LVLRTSGHYLALASIAVAVIVQVIIKNS 120 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 IT G +G+ F G ++ S + YY +L F I+ Sbjct: 121 T-ITGGPSGLTAVPAPDFFGWSLTSD--------------LGYYYYVLLCMFAGFVILRR 165 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + +A + I +N+ A SL + K+ +F +S+ F AG F I PD Sbjct: 166 VIDSRTGDALQAIANNELAAQSLGIPVFRYKVLSFTISTLFAAFAGTLFVHYDGFIDPDR 225 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 +++ + + +GG+ ++ L + E Y Sbjct: 226 LGIHVSVLFLIMTFVGGIGNIYGSVIGAFALTIIEEYAQEFGQY 269 >gi|312199089|ref|YP_004019150.1| ABC transporter [Frankia sp. EuI1c] gi|311230425|gb|ADP83280.1| ABC transporter related protein [Frankia sp. EuI1c] Length = 936 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 72/310 (23%), Positives = 119/310 (38%), Gaps = 19/310 (6%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + + I + L +V G G LSL G Y L + +GL Sbjct: 316 LTTPNDWNDALTATTIGAIICVSLVVVTGYAGQLSLAQYAFAGWGGYVASRLAATHGLPF 375 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 L + + + G+++GLP+L+ RG +LAIAT ++ FQ+IL + P+T G G V Sbjct: 376 LLALVIGVAAAVPVGVLVGLPALRTRGIHLAIATFGLAYSFQSILFQSVPLTGGLEGTVV 435 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 F + V + V L L+A + +RR Sbjct: 436 NPP------------TLFGWDIDAVNHPKRYAIVCLVALLLAALVAGNIRRGRSGRRLVA 483 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 +R N++A SL ++ AKL +FA+S+A G+ G A + + +I VI Sbjct: 484 VRGNERAAASLGISVYGAKLYSFALSAAIAGLGGVLLAFQASYVDFSQYNVFNSISVIIN 543 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 ++ G+ L A A + G + L S N T + + L + Sbjct: 544 TVISGVGFLVGTVLAGANVTGGLT-------TKIFGSLITSGSINQYVTLALAVLLVPTL 596 Query: 333 LMRSHSLLRL 342 + + L Sbjct: 597 VGYPNGLAAR 606 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 93/288 (32%), Gaps = 24/288 (8%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107 IY + GL +V G+L+ A+GA +Y L R GL + V+ +ISG G Sbjct: 14 IYALAGQGLVLVYRGSGVLNFAQGAFAAVGALAYYDLHVRAGLPTVPSVVVALLISGVAG 73 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 ++M ++ + + +I + +L + I G + V L + Sbjct: 74 LLMHFLVMRPLRNAPPLTRVIATLGVMVMLQQLGRIVFGSSIRIVPSFLPSKSIDI---- 129 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + + +L +SA++ R + + +N++A + Sbjct: 130 ------GGGAAVGLDRFVLLGLAIVVSATLWAVYRYSRFGAITSAVAENERAAQLAGHSP 183 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 +A+ + G+AG A + + ++V S A Sbjct: 184 DVIAAVNWALGAMLAGLAGILIAPIAGLDINTLVLLIIPALATAMVAR--FDSFVGALIA 241 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 + ++ + + + LV++ R Sbjct: 242 SLVIGIAQSEITNY------------VRAAGWGDAVPFLLVILVLVAR 277 >gi|91787729|ref|YP_548681.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91696954|gb|ABE43783.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 340 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 27/317 (8%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L + + + Y + LI+++ GL++ +G G SL + IGAY+ IL Sbjct: 17 ALLVLVAPQYLKNYGIYLLTYWLIFIIATMGLNLTIGYAGQKSLGHAAFFGIGAYTVAIL 76 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 WL +P +A+I A G+I+G P+L+ + YLA ATL + ++ + +T Sbjct: 77 MKAGFS-FWLGLPAAALICFAVGLILGFPALRVQTIYLAFATLGFNTAIWLVMRNEEWLT 135 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G GI R + YY +L + + + ++ L R+ Sbjct: 136 GGTFGINNIARPA--------------ILGYSLEANRPYYYFVLVVTLILSGLLWGLLRS 181 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A+R +RDN SL I L +FA+ + + G+AGA FA+ I P F Sbjct: 182 PWGKAFRALRDNPIRAESLGVDIRNYTLLSFAIGAVYAGIAGALFASLVQFIEPAPFAVG 241 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 +I++ +V++GG A+ + + E + + + Sbjct: 242 ASIMMYLMVVVGGAGYFLGPIVGAAVGVVLPEWLRDV------------PGVANWYLPMF 289 Query: 325 VIALFLVILMRSHSLLR 341 A+ ++++ LL Sbjct: 290 GAAVVVLMVWLPDGLLS 306 >gi|19704762|ref|NP_604324.1| branched chain amino acid ABC transporter permease [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19715090|gb|AAL95623.1| Branched-chain amino acid transport system permease protein livM [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 285 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 68/307 (22%), Positives = 126/307 (41%), Gaps = 45/307 (14%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----GLSIWLLIPVSA 100 ILI V+ A L++ VG LG ++L +IGAY+ +L + + + Sbjct: 1 MILINVILAASLNVTVGCLGQITLGHAGFMSIGAYTAALLTKSGLLSGYPGYVVALIIGG 60 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 +++G G I+G+P+L+ GDYLAI TL EI + +LI++ T G G+ R+ Sbjct: 61 LVAGIIGFIIGIPALRLTGDYLAIITLAFGEIIR-VLIEYFKFTGGAQGLTGIPRVNNFT 119 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 ++ + S + + + A IR+++ A Sbjct: 120 -------------------------LIYFITIFSVIFMYSVMTSRHGRAVLAIREDEIAS 154 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + K AF +S+ F G+AG +A + + F ++ +I ++ +V+LGGM S Sbjct: 155 GASGINTTYYKTFAFVLSAIFAGIAGGIYAHNLGILGAKQFDYNYSINILVMVVLGGMGS 214 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + +L + E+ Y + + L +++L R LL Sbjct: 215 FTGSILSAIVLTILPEVLRSFAEY---------------RMIVYPLILIIMMLFRPKGLL 259 Query: 341 RLRTPSN 347 Sbjct: 260 GREEFQI 266 >gi|17229441|ref|NP_485989.1| permease protein of ABC transporter [Nostoc sp. PCC 7120] gi|17131039|dbj|BAB73648.1| permease protein of ABC transporter [Nostoc sp. PCC 7120] Length = 372 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 100/349 (28%), Gaps = 27/349 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ ++ + VV L+ + + ++ ++ + L + A G+ ++ G GL Sbjct: 1 MKKGGRLILIEVGVVVAIALILILIMPLVLSEFRLNLLGRFLSLAIVALGIDLIWGYTGL 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LSL I + +G Y+ + L + + Sbjct: 61 LSLGHGIFFGLGGYAIAMYLKLQIPEGELPDFMELYGVTELPWFWRPFYSFPIAVAAVVI 120 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE----- 180 + L+ I I + +FF + + + Sbjct: 121 IPGLLAGLLGYLVFRNRIKGVYFSILTQAAIIVFFNFFNGQQQFFNGTNGLIDFTTLFGA 180 Query: 181 --------IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 Y + + + I WL IRD++ K Sbjct: 181 TVSDPKTKFIFYTLTVLFLAATYGICRWLTSGRFGRLLIAIRDDESRVRFSGYDPTDFKT 240 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 FAVS A G+AGAF+ +SP + +I ++ V +GG +L T ++ Sbjct: 241 LVFAVSGAIAGIAGAFYTLQSGSVSPRAMDIAFSIEMVIWVAVGGRATLIGAVLGTLLVN 300 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +V+ + L+ Sbjct: 301 YARAFLSE--------------QFAEIWLFFQGALFLIVVTVLPDGLVG 335 >gi|306829182|ref|ZP_07462372.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304428268|gb|EFM31358.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 318 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L + L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNILWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + + + + A+ISGA +++G+P+L+ +GDYLA+ATL Sbjct: 66 HAGFMAIGAYAAAIIGSKSPTYGAFFGAMLIGALISGAVALLVGIPTLRLKGDYLAVATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +I +TNG AGI + Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ L R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YLFVVITTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305 >gi|320530484|ref|ZP_08031542.1| amino acid or sugar ABC transport system, permease protein [Selenomonas artemidis F0399] gi|320137317|gb|EFW29241.1| amino acid or sugar ABC transport system, permease protein [Selenomonas artemidis F0399] Length = 316 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 72/327 (22%), Positives = 126/327 (38%), Gaps = 41/327 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L A+ ++ GA + I + +M A L+++ G G SL Sbjct: 11 MLLFALAIYGVIMGLTGAGVLSAFWQLNLIFAGLNIMLAASLNLINGYTGQFSLGHAGFM 70 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AIGAY VIL + + L + +G G ++GLP+L+ RGDYLAIATL + EI + Sbjct: 71 AIGAYVGVILTTNFHLPFIAALIAGGAAAGLLGALIGLPTLRLRGDYLAIATLGLGEIVR 130 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++I + G AG L + + + Sbjct: 131 IVIINAPYV-GGAAGFKGIPHLTNFT-------------------------WVFFIMLAT 164 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 II + A IR+N+ A ++ K+ AF + +A G+AG F + Sbjct: 165 LFIIKNFVNSRHGRACLAIRENEIAAEAMGINTTRYKVLAFTIGAALAGVAGVLFGHNMY 224 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP F F ++ ++ +V++GG+ S++ ++ + Sbjct: 225 ILSPASFTFMQSFNILIMVVMGGLGSMTGSIAGALVVTFLSAALASF------------- 271 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + +AL L++ R L Sbjct: 272 --PNARMIVYALALILMMFYRPQGLFG 296 >gi|295099269|emb|CBK88358.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Eubacterium cylindroides T2-87] Length = 317 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 81/341 (23%), Positives = 141/341 (41%), Gaps = 43/341 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L+K + LLAV +L L + Y I I ++ A L++V+G G S Sbjct: 6 LSKENIAWLLLAVGAFVLCSLLMNLGIINSYYQITLYNICINIILAVSLNLVIGICGQFS 65 Query: 68 LNCVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L IGAY+ I+ + I V IS +I+ +P+L+ RGDYLAIA Sbjct: 66 LGHAGFMCIGAYAAGIITKMMPNFGGFMIGILVGFAISALVALIVSIPTLRLRGDYLAIA 125 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL +EI + ++ ITNG AG+ +L Sbjct: 126 TLGFAEIIRILVQNM-KITNGAAGLNGIPQLTSWP------------------------- 159 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +L+ +S I+ +A A +IR+++ A ++ K+ AF + + +A Sbjct: 160 LLMIGVVISIMIVCNFTHSAPGRACISIREDEIASEAMGINTTKYKVIAFVIGALLASLA 219 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA +A + I P+ F F+++I ++ +V+ GGM S++ + Sbjct: 220 GALYACNFYVIKPNQFTFNKSIDILVMVVFGGMGSMT---------------SSVIAAIV 264 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + +F+ + +AL +++ + LL R S Sbjct: 265 IGIINMVLANFSEIRMIIYGLALVAIMIFKPTGLLGQRELS 305 >gi|306834094|ref|ZP_07467214.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304423667|gb|EFM26813.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 317 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 70/340 (20%), Positives = 135/340 (39%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L VV +L Y + + I I ++ G ++V+G G +L Sbjct: 6 KINLSWLALIVVLFGILEFLATTNILNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ + + + V +I+ ++ G+P+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYATAIITQQNPTYGGFYFSMLVGIVIAVLVALVFGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M+EI + +++ +TNG AG+ V+ Sbjct: 126 GMAEIIRIVIVNGGDLTNGAAGLTGILPYTTWP-------------------------VI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 +IL R++I ++R+++ A ++ I K+ F + + +AG+ Sbjct: 161 FIFVVAITILILNFLRSSIGRQVISVREDEIAAEAMGVNITRMKVLIFVMGAIISAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + P F ++I + I +LGG+ S++ A +L + + Sbjct: 221 LYVGYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTILAAIVLGILNMFLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL LV++ R LL + + Sbjct: 275 ---------SNLRMIIYSLALILVMIFRPGGLLGTKEFTL 305 >gi|294791636|ref|ZP_06756784.1| high affinity branched-chain amino acid ABC transporter, permease protein [Veillonella sp. 6_1_27] gi|294456866|gb|EFG25228.1| high affinity branched-chain amino acid ABC transporter, permease protein [Veillonella sp. 6_1_27] Length = 337 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 57/309 (18%), Positives = 120/309 (38%), Gaps = 19/309 (6%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + + +I + + + G LSL ++GAY IL + L I Sbjct: 3 LLNPYYLQIVMFFIINAIMGISIYFTLA-SGQLSLGAAGFMSVGAYVGAILSLKADLPIV 61 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151 L I + +++ +I+GLP+ + RG YLAIATL E+ + I + G +GI Sbjct: 62 LGIIIGGLVASLVAVIIGLPTTRLRGLYLAIATLGFGEVVRVIFLNLDITNGALGLSGIP 121 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + + +LL + L + + + + + A+ Sbjct: 122 SIPQELTNYAYEFDFDGLMGID-AVAWGNLMAIIILLAILVLIIAFCVRINNSRVGRAFA 180 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 I+ + A + +++ K+ AF + + G+ G +A + I+P F + + + ++ Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 + GG + + IL + E+ ++ Y + L ++ Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285 Query: 332 ILMRSHSLL 340 + +R +L Sbjct: 286 MAVRPDGIL 294 >gi|282899135|ref|ZP_06307116.1| inner-membrane translocator [Cylindrospermopsis raciborskii CS-505] gi|281196051|gb|EFA70967.1| inner-membrane translocator [Cylindrospermopsis raciborskii CS-505] Length = 381 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 103/347 (29%), Gaps = 27/347 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 K ++ + V+ LL L + ++ ++ + L + GL ++ G GLLS Sbjct: 12 QAKKSILVEIAVVMAIALLLLVIMPLVLTEFRLNLLGRFLSLAIVGLGLDLIWGYTGLLS 71 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK----------- 116 L I + +G Y+ + S L + Sbjct: 72 LGHGIFFGLGGYAIAMYLKLQVPSGELPDFMGLYGVTELPWFWHPFYSFGFAVIAVILIP 131 Query: 117 --FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 G + + ++ + +L+ + + Sbjct: 132 GLLAGVLGYLVFRNRIKGVYFSILTQAAVIIFFNFFNGQQKLFNGTNGLTAFKTLLGINL 191 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + ++ +Y + + + + WL IRD++ K+ Sbjct: 192 TDRGMQLVLYSLTILFLIFTYGLCRWLTTGRFGRLLMAIRDDETRVRFCGYDPTEYKVLV 251 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 FAVS A G+AGAF+A +SP +I ++ V +GG +L+ T ++ Sbjct: 252 FAVSGAIAGIAGAFYAIQSGSVSPRAMDIGFSIEMVIWVAVGGRGTLTGAILGTLLVNYA 311 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +V+ + ++ Sbjct: 312 RTFLSE--------------QFAEIWLFFQGALFLVVVTVLPDGMMG 344 >gi|306825607|ref|ZP_07458946.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431968|gb|EFM34945.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 318 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L + L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNILWLFLLLAGYGLISVLVSAGILNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + + + + A+ISGA +++G+P+L+ +GDYLA+ATL Sbjct: 66 HAGFMAIGAYAAAIIGSKSPTYGAFFGAMILGALISGAVALLVGIPTLRLKGDYLAVATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +I +TNG AGI + Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ L R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YLFVVVTTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305 >gi|226939146|ref|YP_002794217.1| ABC-type branched-chain amino acid transport system, permease component [Laribacter hongkongensis HLHK9] gi|226714070|gb|ACO73208.1| ABC-type branched-chain amino acid transport system, permease component [Laribacter hongkongensis HLHK9] Length = 354 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 130/328 (39%), Gaps = 17/328 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L L F+ + S + + I L+ + A GL+I+ G G LSL A+ Sbjct: 27 LFVGALLLAAFVAVPGLASDYLLSGILIPFLVLSLAALGLNILTGYAGQLSLGSAAFMAV 86 Query: 77 GAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ R GL + + + ++ G++ GLPSL+ +G YLA+ATL + Sbjct: 87 GAFATYNFMLRIPGLPLLPALLLGGGVAAVVGVLFGLPSLRIKGFYLAVATLAAQFFIEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L K+ +N + ++ + Y LG+ + A Sbjct: 147 ALTKFGWFSNYSSSGVISAPALE-------------VFGLPLDTPASKYLFTLGVVAVMA 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254 + R++I AW +RD A + ++ KL+AFAVSS + G+AG +A Sbjct: 194 LAAKNMVRSSIGRAWMAVRDMDVAAEVIGIPMLKTKLTAFAVSSFYCGVAGGLWAFILLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F + ++ ++I+GG+ S+ A ++ + + Sbjct: 254 TVDPQAFDLHRSFQILFMIIIGGVGSILGSFLGAAFIVLLPIVLN--LGGQLLHGAVSSS 311 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L + +++ L RL Sbjct: 312 FLSNLEMMLFGGLIIFFLIVEPLGLARL 339 >gi|72384237|ref|YP_293591.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72123580|gb|AAZ65734.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 344 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 118/301 (39%), Gaps = 28/301 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 M +++L + +FA ++++G GLLS AY +GL+ L + + Sbjct: 26 MLMKVLCFALFACAFNLLLGYTGLLSFGHAAFLGTAAYISGYGMKTWGLTPELGLLLGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 +S A G ++G +++ +G Y A+ TL ++++F + ++ T G+ G+ R Sbjct: 86 VSAAAGFVVGALAIRRQGIYFAMITLALAQMFYFLFLQAP-FTGGEDGMQAISR------ 138 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYY +L + + +I + + + IR+N+ Sbjct: 139 -------GRLFGLIDLASDLRMYYFVLAIFLFAFWLIHRIIHSPFGQILKAIRENEARTT 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+ G+AGA + + + V+ + +LGG+ + Sbjct: 192 SLGYDVARYKLLAFVLSAGLAGLAGATKTLVFQFATLTDAHWHTSGEVVLMTLLGGLGTA 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I++ + T +M + +L ++ Sbjct: 252 FGPVVGAGIVVAIQNALAD--------------KVGSMITVIMGSIFVVCVLAFRRGIVG 297 Query: 342 L 342 Sbjct: 298 E 298 >gi|78063381|ref|YP_373289.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77971266|gb|ABB12645.1| amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia sp. 383] Length = 603 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 73/324 (22%), Positives = 130/324 (40%), Gaps = 33/324 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V + L L + Y+ +Y + A L++V G++G +SL IGA Sbjct: 312 VLVALIALAAVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L S G S + IP + +I+ G ++ P+ + RG Y++IATL + E+ +++ Sbjct: 372 YASALLSSDLGWSPAVTIPCAGVITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI L + Y+ + + A + Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQ 473 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L R+ + R +R++ A + K AFAV G++G A I+ Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F +I+ +++VILGG+ ++ LIG+ EL Y Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIAGAIALIGLPELFRWAADY-------------- 579 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + L L++ R LL Sbjct: 580 -RMLIYGLVLLLLVRFRPQGLLGT 602 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R+GL + + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVVVGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +A + +LR T + A R + Sbjct: 126 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280 Query: 337 HSLLR 341 + L Sbjct: 281 NGLFS 285 >gi|75910560|ref|YP_324856.1| inner-membrane translocator [Anabaena variabilis ATCC 29413] gi|75704285|gb|ABA23961.1| urea ABC transporter membrane protein [Anabaena variabilis ATCC 29413] Length = 372 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 99/349 (28%), Gaps = 27/349 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ ++ + VV L + + ++ ++ + L + A G+ ++ G GL Sbjct: 1 MKQGGRLILVEVGVVVAIALFLILIMPLVLSEFRLNLLGRFLSLAIVALGIDLIWGYTGL 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LSL I + +G Y+ + L + + Sbjct: 61 LSLGHGIFFGLGGYAIAMYLKLQIPEGELPDFMGLYGVTELPWFWRPFYSFPIAVATVVI 120 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE----- 180 + L+ I I + +FF + + + Sbjct: 121 VPGLLAGLLGYLVFRNRIKGVYFSILTQAAIIVFFNFFNGQQQFFNGTNGLIDFTTLFGA 180 Query: 181 --------IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 Y + + + I WL IRD++ K Sbjct: 181 TVSDPKTKFIFYTLTVLFLAATYGICRWLTSGRFGRLLIAIRDDESRVRFSGYDPTDFKT 240 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 FAVS A G+AGAF+ +SP + +I ++ V +GG +L T ++ Sbjct: 241 LVFAVSGAIAGIAGAFYTLQSGSVSPRAMDIAFSIEMVIWVAVGGRATLIGAVLGTLLVN 300 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +V+ + L+ Sbjct: 301 YARAFLSE--------------QFAEIWLFFQGALFLIVVTVLPDGLVG 335 >gi|313892767|ref|ZP_07826348.1| branched-chain amino acid ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442698|gb|EFR61109.1| branched-chain amino acid ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] Length = 338 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 121/309 (39%), Gaps = 19/309 (6%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + + +I + + + G LSL ++GAY +L + L I Sbjct: 4 LLNPYYLQIVMFFIINAIMGISIYFTLA-SGQLSLGAAGFMSVGAYVGAMLSLKAELPIV 62 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151 + I + +++ +I+GLP+ + +G YLAI+TL E+ + I + G +GI Sbjct: 63 VGILIGGLVASLVAVIIGLPTTRLKGLYLAISTLGFGEVVRVIFLNLDVTNGALGLSGIP 122 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + + I + +L + + A + + + + A+ Sbjct: 123 SIPQELTNYAYEFDMDGLMGLDAVTWGNLIAIIILLAILVLIIAF-CVRINNSRVGRAFA 181 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 I+ + A + +++ K+ AF + + G+ G +A + I+P F + + + ++ Sbjct: 182 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 241 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 + GG + + IL + E+ ++ Y + L ++ Sbjct: 242 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 286 Query: 332 ILMRSHSLL 340 + +R +L Sbjct: 287 MAVRPDGIL 295 >gi|322387416|ref|ZP_08061026.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus infantis ATCC 700779] gi|321141945|gb|EFX37440.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus infantis ATCC 700779] Length = 318 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 73/325 (22%), Positives = 135/325 (41%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 ++ L + + + QI I ++ A GL+++VG G SL AIGAY+ I+ Sbjct: 21 VISLLVSFGILNLFHIQILEQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80 Query: 85 GS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 GS + + + + A+I+G +++G+P+L+ +GDYLA+ATL ++EI + +++ Sbjct: 81 GSKSPTYGAFFGAMLLGAIIAGLVALVVGIPTLRLKGDYLAVATLGVAEIIRILIVNGGD 140 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI + ++ L Sbjct: 141 LTNGAAGILGIPNFTNWQM-------------------------VYIFAVITTIATLNFL 175 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ I ++R+++ A S+ K+ AF + +AG+ A + P + Sbjct: 176 RSPIGRLTLSVREDEIAAESVGVNTTKIKIIAFVFGAMTASIAGSLQAGFIGSVVPKDYS 235 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F +I V+ IV+ GG+ S++ A +L + + Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVAAIVLGILNMFLQDV---------------ASVRMI 280 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305 >gi|312879834|ref|ZP_07739634.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] gi|310783125|gb|EFQ23523.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] Length = 297 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 132/304 (43%), Gaps = 40/304 (13%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y + + I + I + A G+S++ G G+ SL A+GAY+ IL YGL + + Sbjct: 4 YGEGIVILLCINCIAALGISLLTGFTGIFSLGHAGYMALGAYTVAILTVEYGLPWFAALI 63 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ +++ ++G+P+LK GDY AIA++ + E + I+ W+ +T G G D Sbjct: 64 LAGIVAMVLAYLIGIPTLKLMGDYYAIASIGLGEAIRLIIENWQSVTRGARGYPGIDAFT 123 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L V +G + ++ + L A++ RD+ Sbjct: 124 TLP-------------------------VAVGCLVVMSAAMFLLINGNFGRAFKACRDDY 158 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A L ++ + A+S+ + G+AG A I P MF +++ + ++V+ GG Sbjct: 159 LAASLLGFHTANYRVFSLAISAFYCGVAGGLLAGFMSFIQPVMFDMNKSTELTAVVVFGG 218 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+S T I+ V EL ++ Y + + L +++++R Sbjct: 219 LGSMSGCLLGTVIITLVTELFRPISQY---------------RMLIYGLVLVVIMVVRPE 263 Query: 338 SLLR 341 L+ Sbjct: 264 GLMG 267 >gi|119899338|ref|YP_934551.1| putative branched-chain amino acid transport permease [Azoarcus sp. BH72] gi|119671751|emb|CAL95665.1| putative branched-chain amino acid transport permease [Azoarcus sp. BH72] Length = 326 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 71/331 (21%), Positives = 130/331 (39%), Gaps = 26/331 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L+ +L L + M ++L+ +FA L ++VG GL+SL + Sbjct: 9 GLMVAKVVVLAALLAFPLVGSAFYTEMVAKVLVMAIFAMSLDLLVGFTGLVSLGHAAYFG 68 Query: 76 IGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 I AY +L +Y ++W+ +P S + + ++G+ L+ +G Y + TL +++ Sbjct: 69 IAAYVVALLTPKYDPANLWIALPASVLGAALAAFVIGIFVLRTKGIYFIMVTLAFAQMAY 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + G GI + + + + MYY ++GM L Sbjct: 129 YVFHD-TALGGGSDGI---------YINFKPDAAIAGWAPFDLNEPMHMYYFIVGMLVLV 178 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + L R+ IR N+ SL KL+AF V+ A G+AG + Sbjct: 179 FAFLTLLLRSPFGKVLVGIRSNEHRMQSLGYATFRYKLAAFTVAGALAGVAGFLYGVLFG 238 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P+ + ++ V+ +VILGGM +L IG+ E+ G ++ Sbjct: 239 FVTPEYLSWHQSGNVLMMVILGGMGNLVGAVLGAFAFIGLQEVFSGWTKHW--------- 289 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 LM + +L L L Sbjct: 290 ------QLLMGGVIVAAVLFMPGGLSALPRR 314 >gi|256828332|ref|YP_003157060.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256577508|gb|ACU88644.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 358 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 116/342 (33%), Gaps = 8/342 (2%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + ++ YI S+ + + + ++ + +IV G +G + A+G Sbjct: 9 LLLAITGVIVFMSHQEYIDLYIQSVIMFMGVNIILSTSFNIVNGYMGEFACGHAGFMAVG 68 Query: 78 AYSYVIL--GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 AY ++ ++ + + L + + + + Sbjct: 69 AYVTSVVNVMLFTDDKVFGAALLPPETAVYLFPFTLLIGGAAAAVAGVLVAIPSFKTRDD 128 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L N + + G ++ F + ++ ++ F + Sbjct: 129 YLAIITIAANFIIISTIINIDKIGGARGFMGMKKVLFAMTDSYDIPWILLWVMIFTFGTV 188 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 II + I+ ++ A ++ KL AF +SS G+AG FA Sbjct: 189 FIIRRYVTSTYGKGIIAIKQDEVAAEIMSVNTNRMKLVAFMLSSGLAGIAGGLFAHILGY 248 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I+P+ F ++ + +V LGGM SLS + + ++E + + ++ Sbjct: 249 INPNSFGILKSTECLVMVYLGGMGSLSGSVISAILFTLLLESLRFIIPWMDTAMHYMHLL 308 Query: 316 F------NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + ++ + L L++ R ++ R S+ + Sbjct: 309 PDSYELSQVWKWVIIPLILILLMQFRPEGIMGNRELSDVFPK 350 >gi|90425185|ref|YP_533555.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90107199|gb|ABD89236.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 537 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 92/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ IGAY ++ S L S +I+ ++ Sbjct: 258 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFVVQETIRTSYPALFDYSLLIAVPLAFLVA 317 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 +I + + +L W + + S Sbjct: 318 GLIGVIIER--SIIRFLYGRPLETLLATWGLSLVLQQAVRTLFGPTNREVGNPSW-MSGA 374 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F ++ ++L + A ++ LR T++ R + N++ S+ Sbjct: 375 FELGQIVITYNRLWILCFTLAVFAILLAMLRYTSLGLEMRAVTQNRRMAASMGIATSRVD 434 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 435 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFTL 492 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + M +++ + L I R L L+ + Sbjct: 493 GIANKFLEPMAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAIE 536 >gi|221069526|ref|ZP_03545631.1| inner-membrane translocator [Comamonas testosteroni KF-1] gi|220714549|gb|EED69917.1| inner-membrane translocator [Comamonas testosteroni KF-1] Length = 637 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 121/313 (38%), Gaps = 33/313 (10%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 Y + I + +FA L ++G G+ S + +GAY +L Sbjct: 339 MASGAAGGSYATVLLADIFVAALFASSLHFILGPGGMHSFGHAAYFGLGAYGAALLVRTL 398 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L + + + + + A ++ G ++ G YL + TL ++I I+ +W T G Sbjct: 399 DLPMEAALLLGPLAAAAGALLYGWFCVRLSGVYLTMLTLAFAQISWAIVFQWDDFTGGSN 458 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ + Y++ LG+C L ++ L + + Sbjct: 459 GLTGVWPPEW------------------ASQGPAFYWLALGICALGIYLLRRLLFSPLGY 500 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A R RD+ ++ + + +AF ++ F G+AGA FA S+ ++PD ++++ Sbjct: 501 ALRASRDSALRADAIGIDVRRIQWTAFVIAGLFAGLAGALFAFSKGGVAPDAMSVTKSVD 560 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 + +V+LGG+ +L+ A + + Y+ LM + Sbjct: 561 ALVMVLLGGVQTLAGPVVGAAAFTWLHDTVARNTEYWRA---------------LMGATM 605 Query: 329 FLVILMRSHSLLR 341 +++L+ + Sbjct: 606 LILVLLAPQGIAG 618 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 97/305 (31%), Gaps = 17/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--SRYGLSIWLLI 96 + + + + GLS++ G ++ Y +GA+ + W + Sbjct: 10 LLNGLASASSLFLVSVGLSLIFGVTRTINFAHGSFYMLGAFIAYSSVDRLSPHIGFWPAL 69 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V+ + GA G + L+ + L+ + ++ G Sbjct: 70 LVAPLACGALGALTETLLLRRIYKAPELFQLLATFALVLVIKDAALWLWGP--------- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 R+ + + +++ + + L L RT R + Sbjct: 121 -EELFGPRATGLEGSVEILGRQFPTYDLFLIAVGPCVLLGLTLLLTRTRFGTLVRAATQD 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + + FA+ + G+ GA +V++G Sbjct: 180 REMVGALGVNQAWLFTAVFALGTLLAGLGGALQLPREPA--SLEMDMLTIGAAFVVVVVG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM S+ A ++ + +C + + F+ SF+ + + + +V++ R Sbjct: 238 GMGSIPGAFMAALLVAELKAVCIWLG---VQEIAGFELSFSKLTLVVEFLVMAVVLIWRP 294 Query: 337 HSLLR 341 LL Sbjct: 295 WGLLG 299 >gi|257462891|ref|ZP_05627297.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. D12] gi|317060514|ref|ZP_07924999.1| branched chain amino acid ABC transporter [Fusobacterium sp. D12] gi|313686190|gb|EFS23025.1| branched chain amino acid ABC transporter [Fusobacterium sp. D12] Length = 323 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 139/340 (40%), Gaps = 45/340 (13%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I LL + L++ L L ++ +Y S+ I I I ++ A L+I VG LG +++ Sbjct: 9 YIISFLLLFLVYLMMTLLLHSSMFSRYQISVIILICINIILAVSLNITVGCLGQITIGHA 68 Query: 72 IAYAIGAYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 ++GAY+ + + + + ++SG G+I+G+P+L+ GDYLAI TL Sbjct: 69 GFMSVGAYTAALFSKSALVAGVPGFLIALILGGIVSGIIGVIIGIPALRLNGDYLAIITL 128 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 EI + + I++ T G G+ + ++ Sbjct: 129 AFGEIIR-VFIEYFDFTGGAQGLRGIPKFNNFD-------------------------LI 162 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + S ++ L + A IR+++ A + + K AF +S+ F G+AG Sbjct: 163 YWIMVFSVILMFSLMTSRHGRAILAIREDEIASSASGINTTYYKTFAFTLSAIFAGIAGG 222 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + + F ++ +I ++ +V+LGGM S + A +L + E+ + Y Sbjct: 223 IYAHNLGVLGAKQFDYNYSINILVMVVLGGMGSFTGSIIAAIVLTLLPEVLREFSDY--- 279 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L +++ R LL Sbjct: 280 ------------RMIAYAVILIFMMIFRPKGLLGREEFRL 307 >gi|159044524|ref|YP_001533318.1| putative branched-chain amino acid transport system / permease [Dinoroseobacter shibae DFL 12] gi|157912284|gb|ABV93717.1| putative branched-chain amino acid transport system / permease component [Dinoroseobacter shibae DFL 12] Length = 317 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 118/315 (37%), Gaps = 22/315 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRY 88 Y+ I + GL++ G+ GL + V + G Y+ + Sbjct: 6 SYLVFFATIASILAIAVLGLNLHWGNTGLFNGGVVAFFGAGGYATLILGGTPQAAHLGGF 65 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 GL L + +I+G ++GL +++ R DYLAIAT ++ F+N++ + + G + Sbjct: 66 GLPYGLALLGGLVIAGLLAWLVGLLTIRLRHDYLAIATFGVAVAFENLVRNAQRLAGGAS 125 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ +R + Y + +L + + L R Sbjct: 126 GLRGFERPLADTIPP------------GLAYNAAFFAFVLAALIATYLGLERLIRGPFGR 173 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 R IR+++ A +L + +L+AF + S +G+AGA +A ISP Sbjct: 174 LLRAIREDETAARALGKSPDRIRLTAFVIGSVILGLAGALYATFYAFISPQDVLPILTFQ 233 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 + +++I+GG + ++ G + ++ L+ + Sbjct: 234 IWAMLIVGGAGNNRGAIAGAFLIWGAWTASGWALSRFAP--IEVQLYTGSIQFVLIGCVI 291 Query: 329 FLVILMRSHSLLRLR 343 ++L R L R Sbjct: 292 VGMLLWRPQGLFPER 306 >gi|328542037|ref|YP_004302146.1| amino acid or sugar ABC transporter, permease [polymorphum gilvum SL003B-26A1] gi|326411787|gb|ADZ68850.1| Putative amino acid or sugar ABC transport system, permease protein [Polymorphum gilvum SL003B-26A1] Length = 412 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 51/368 (13%), Positives = 104/368 (28%), Gaps = 40/368 (10%) Query: 1 MSIFSLR-LNKYDKILCLLAVVYPL------LLFLFLGATKSQKYIDSMGIQILIYVMFA 53 M+ F R L++ + + + + LL Y ++ + L Y + A Sbjct: 1 MTSFLFRALDRRAGLFLAVLLAITIAVPALNLLVPPSSPFHVPTYAVTLMGKYLTYALLA 60 Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113 + +V G G+LSL +A+G Y+ + R S + LP Sbjct: 61 LSVDLVWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGDPLLPDFMVFLNWKELP 120 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVAD 154 D A L++ + + + + D Sbjct: 121 WYWHGFDMFWFAALMVLVVPGVLAFVFGWFAFRSRVTGVYLSIITQALTYALLLAFFRND 180 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + + F ++ L + + R+ + +R Sbjct: 181 MGFGGNNGLTDFKDILGFSIQADTTRAGLFAASGIALMLCFLVCRAVTRSKLGKVLVAVR 240 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 D + L + KL + +S+ G+AGA + I+P F + +I + V Sbjct: 241 DAESRARFLGYRVEHYKLFVWTLSAMMAGLAGALYVPQVGIINPGEFAPANSIEAVIWVA 300 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG +L + F + + +V L Sbjct: 301 VGGRGTLVGPVIGAVAVNFGKTW--------------FTAALPDVWLFALGGLFVVVTLF 346 Query: 335 RSHSLLRL 342 ++ Sbjct: 347 LPRGIVGT 354 >gi|283853508|ref|ZP_06370749.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] gi|283571089|gb|EFC19108.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] Length = 345 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 119/339 (35%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + IL + + L LFL Y + I I ++ A L+++ G GL S Sbjct: 1 MRRGRTILLNVLALAALGLFLAFAEANCDGYQIQILNLIAINIILALSLNLIYGFTGLFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY IL + + + A Sbjct: 61 LGHAGFMAIGAYVCSILIMTPEQKD--TLFILQPAFDWVVAAHAPFLVAVLAGGAVAALF 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + F + + + G R+ + I + Sbjct: 119 GVIVGFPLLRLGDDYLGIATLGFAEIIRVVANNIPRLTN----GALGFKGIPSYANLWWN 174 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G ++ +I+ L ++ N + IRD++ A ++ + KL +FAV S F G+ GA Sbjct: 175 YGFAVITLYVIVRLLQSNTGNVLKAIRDDETASKAMGVDVFRYKLLSFAVGSFFAGVGGA 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A+ I P MF F+ V+ IV+ GG+ SLS A + ++E + Sbjct: 235 LIASLLTTIDPKMFLFTLTFNVLMIVVAGGLGSLSGSVLAGIGITVLLEWLRIVENPVDV 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + +AL ++IL R L+ +R + Sbjct: 295 LGFSLP-GIPGMRMVVFSLALIVIILFRREGLMGMRELT 332 >gi|186473280|ref|YP_001860622.1| inner-membrane translocator [Burkholderia phymatum STM815] gi|184195612|gb|ACC73576.1| inner-membrane translocator [Burkholderia phymatum STM815] Length = 633 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 124/284 (43%), Gaps = 18/284 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + ++ILI V+FA L ++G G+ S + +GAY + L + + Sbjct: 344 PYMPVLLVEILIAVLFAASLHFIMGPGGMHSFGHAAYFGLGAYGAALFLKVLELPMEAAL 403 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++ ++ G ++ G YLA+ TL ++I +++ +W +T G GI Sbjct: 404 VLGPVLAILGALLFGWFCVRLSGVYLAMLTLAFAQIVWSVVYQWDDVTGGSNGI------ 457 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +PSS++ + YYV L ++ + + + A R RD+ Sbjct: 458 ------------LGLWPSSWLSSPVAYYYVTLAFAVPGVWLLRRMLFSPLGYAMRASRDS 505 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + AF ++S F G+AG+ +A S+ ISP++ S ++ + +V+LG Sbjct: 506 ALRAEAIGIDTKRVQWVAFVIASLFCGLAGSLYAFSKGTISPEVISVSRSVDGLVMVLLG 565 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 G+ +L+ A+L + + Y+ L + Sbjct: 566 GIQTLTGPVVGAALLTWLQDAVARQTDYWQALLGAAILLLVVAF 609 Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 102/307 (33%), Gaps = 18/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLL 95 + + + A GLS++ G +++ Y +G Y + SR+ + WL Sbjct: 9 MVNGLADASALFLVAAGLSLIFGVTRIVNFAHGSFYMLGVYVAYTITSRFGATTVGFWLS 68 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + SA+ GA G ++ L+ + L+ + I G ++ Sbjct: 69 VIASALTIGALGALVECIVLRRIYKAPELFHLLATFALVLIFRDTALAIWGPQDLFGPRA 128 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + G + + + +++ + ++ L T R Sbjct: 129 PHLAGAVELLGHQLPTYDIA----------LIVIGPLVLLALWYALSHTRWGTLVRAATS 178 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + AF V + G+ GA +V++ Sbjct: 179 DREMLGALGINQAWLFTGAFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A ++ + LC G+ SL S + + + +V+++R Sbjct: 237 GGMGSIPGAFVAALLIAEIKALCIGIGH---VSLFGIGLSLSRFTLVAEFVVMAVVLVVR 293 Query: 336 SHSLLRL 342 LL Sbjct: 294 PWGLLGR 300 >gi|308185587|ref|YP_003929718.1| ABC transport system, permease protein [Pantoea vagans C9-1] gi|308056097|gb|ADO08269.1| Putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 521 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 87/288 (30%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ + S + + +++ ++ Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWWVQSLFQQFAPHYLAWYPLLALPVAFMVTAAIGMV 307 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L W + V L S + + Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRVLFGAQNLEVANPSWLSGGLQLLPNL 365 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+L + F+ A L L RT + R + N+ + AF + Sbjct: 366 VLPWNRIAVILFVVFVLALTWLLLNRTRLGMNVRAVTQNRAMAECCGVPTGRVDMLAFGL 425 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 426 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 483 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L+++ + L I R L ++ Sbjct: 484 LEPQIGAVLGK-------------ILILVIIVLFIQKRPQGLFAVKGR 518 >gi|210632507|ref|ZP_03297435.1| hypothetical protein COLSTE_01337 [Collinsella stercoris DSM 13279] gi|210159602|gb|EEA90573.1| hypothetical protein COLSTE_01337 [Collinsella stercoris DSM 13279] Length = 360 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 76/339 (22%), Positives = 143/339 (42%), Gaps = 27/339 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + D + L ++ ++ A + I + I Y++ A L++VVG G L Sbjct: 8 KKTRSDFLTYALVILAFIVASFLKDAGMIPRMIAGQLVPICAYIVMAISLNLVVGVAGDL 67 Query: 67 SLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL ++GAYS ++ + + + + V A + G ++G+P L+ G Sbjct: 68 SLGHAGFMSVGAYSGIVAAMSLAEAIPNDTVRLVIALIVGAACAALAGFLIGIPVLRLSG 127 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR-----LYFLGTTVRSLIRFFRFPS 174 DYLAI TL EI + ++ + + + + + LG + + Sbjct: 128 DYLAIVTLAFGEIIKEVVTCLIVGVDERGLHVLFNLTGKLTVDNLGLSETGVAIIKGAQG 187 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + I ++ + ++ I+L L R+ A +RDN+ A S+ + ++ A Sbjct: 188 ASGTDMISTFFAGFVLVMVALVIVLNLVRSRTGRAILAVRDNRIAAESVGISTTKYRMIA 247 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F VS+A G AGA F S ++S F F+ +I+++ V+LGG+ ++ A IL + Sbjct: 248 FVVSAALAGAAGALFGNSFSQLSATKFDFNMSILILVFVVLGGLGNMRGSIIAATILTIL 307 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 E + Y + I L LV++ Sbjct: 308 PEALRQFSDY---------------RMLVYAIVLILVMI 331 >gi|220924474|ref|YP_002499776.1| urea ABC transporter permease protein UrtB [Methylobacterium nodulans ORS 2060] gi|219949081|gb|ACL59473.1| urea ABC transporter, permease protein UrtB [Methylobacterium nodulans ORS 2060] Length = 558 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 93/304 (30%), Gaps = 18/304 (5%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 + ++ A GL+I G +G++++ +GAY+ ++ + L S I+ Sbjct: 272 LGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQEAIRQRMPGLFDWSLPIAI 331 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 ++ I + + +L W + + Sbjct: 332 PLAFLVAGAVGIVIER--GIIRHLYGRPLETLLATWGVSLILQQAVRSLFGPTNREVGAP 389 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 S + +++L + + L L+ T+ R + N++ S+ Sbjct: 390 SY-MAGAVDVFGLSITWGRLWIVLFALAVFLGLNLILKATSFGLKTRAVTQNRRMAASMG 448 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + F + S G+AG A S+ S I +V+ GG+ +L Sbjct: 449 IRTPWIDAFTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFLVVVFGGVGNLWGT 506 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 A L + L+++ + L I R L L+ Sbjct: 507 LVAALTLGVANKFLEPYAGAVLGK-------------ILLLVFIVLFIQKRPRGLFALKG 553 Query: 345 PSNF 348 + Sbjct: 554 RAVE 557 >gi|313891287|ref|ZP_07824905.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120354|gb|EFR43475.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] Length = 317 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 132/337 (39%), Gaps = 42/337 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L + Y + + I I ++ A G ++V+G G L Sbjct: 6 KSLGTWLMTIACLFFTLNFLINGGILGPYHVQILMGIGISIIMAMGTNLVLGFSGQFPLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I + ++ + + +I+G +I+G P+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYATAIFTNYMPTYLGFYISMLLGVLIAGLLAIIVGFPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++EI + +++ ITNG AG+ R V+ Sbjct: 126 GVAEIIRMVIVNGGDITNGAAGLTGILRYSTWP-------------------------VV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L A +L R++I ++R+N+ A S+ K+ F ++ +AG+ Sbjct: 161 FIFVVLIAVAMLNFLRSSIGRQVISVRENEIAAESMGVNTTKIKVLTFTFAAMTASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + A + P F +I + I +LGG+ S++ A +L + Sbjct: 221 LYVAYIGTVVPKDFTIMRSIDYLIIAVLGGLGSMTGTILAAIVLGVLNMYLQSF------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + IAL LV++ + L+ + Sbjct: 275 ---------SDIRMIIYSIALILVMVFKPGGLMGTKE 302 >gi|119387819|ref|YP_918853.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119378394|gb|ABL73157.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Paracoccus denitrificans PD1222] Length = 330 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 110/324 (33%), Gaps = 15/324 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA++ L+ + ++ + I+ + GL++ +G GL+S + IG Sbjct: 13 LAILALLVATAIGAHLAGNGFTVTLATKAAIFGLAGVGLNLALGYGGLISFGHAAFFGIG 72 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y IL S + + ++ + + ++ G + + Sbjct: 73 GYVTGILASHASTGMPVTSLPFTIMGSNEMLGIWPMAMLAAGLAALVIGALSLRTSGVYF 132 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + G S FP I + + + ++ Sbjct: 133 IMVTLAFAQMLYYFAMSWPRYGGEDGLSFYVRNTFPGLNTFAPIQYFAICATLLAVALVF 192 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + ++ A + R N + ++ +L+AF +S +G+AG+ +A +S Sbjct: 193 TAVVTQSRFGLALQAARQNSQRTVAVGIRPYAIRLTAFVLSGMIVGLAGSLYADLNRFVS 252 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P M + + ++ VILGG+ L A+ I + + G++ Y+ L Sbjct: 253 PAMMSWHMSGEIMVFVILGGVGRLCGPVAGAALFILLEHVLGGISEYWQALLGLLLL--- 309 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 ++L L+ Sbjct: 310 ------------AIVLFAPGGLIG 321 >gi|192292609|ref|YP_001993214.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192286358|gb|ACF02739.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 339 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 126/304 (41%), Gaps = 30/304 (9%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +I +LIY + L+I+ G G SL YA+GAY+ IL +G++ L + Sbjct: 45 NFIIFQMTMVLIYAIAVLALNILTGGSGQFSLGQSAFYAVGAYTSAILMENFGVNYALTL 104 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IKWKPITNGKAGIYVAD 154 P+S + CG + GLP+L+ G YLA+AT ++ +L ++ T G G+ + Sbjct: 105 PISGAVCFICGYLFGLPALRLSGIYLALATFALATAMPQLLKLHYFEHWTGGVQGLVITK 164 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 G + + +YY +L + + L ++ A IR Sbjct: 165 PDAPFGLPMSQDMW--------------LYYFVLVVSMAIYVASVNLLKSRSGRAMMAIR 210 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 DN+ A ++ + K AF +S+ G+AG A + ++PD + I + ++ Sbjct: 211 DNEIAASAMGVDVARYKTLAFGISAGITGVAGGLGAIAVQFVAPDSYTIQLAIALFLGMV 270 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG+ L A ++ V + G + + + + L L+I + Sbjct: 271 VGGVGWLPGSIVGAAFIVFVPNIAEGFSKGLSGA--------------VFGVILVLIIFL 316 Query: 335 RSHS 338 H Sbjct: 317 LPHG 320 >gi|77462828|ref|YP_352332.1| branched chain amino acid ABC transporter inner membrane protein [Rhodobacter sphaeroides 2.4.1] gi|126461720|ref|YP_001042834.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] gi|221638696|ref|YP_002524958.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131] gi|332557716|ref|ZP_08412038.1| Inner-membrane translocator [Rhodobacter sphaeroides WS8N] gi|77387246|gb|ABA78431.1| ABC branched amino acid transporter family, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126103384|gb|ABN76062.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] gi|221159477|gb|ACM00457.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131] gi|332275428|gb|EGJ20743.1| Inner-membrane translocator [Rhodobacter sphaeroides WS8N] Length = 358 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 77/327 (23%), Positives = 133/327 (40%), Gaps = 15/327 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V ++ F L + + +++ + LIY + A GL+I+ G G +SL A+GAY+ Sbjct: 31 VALVVGFAILPFVINDYWANAVVVPFLIYAIAAIGLNILTGYCGQVSLGTGGFMAVGAYA 90 Query: 81 YV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 ++ + + I + + ++ I+ G++ GLPSL+ +G YLA+ATL + K Sbjct: 91 VYKLMTAFPDVPILIHVILAGAITAGVGVLFGLPSLRIKGFYLAVATLAAQFFLVWLFNK 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 N A + F + Y F A I Sbjct: 151 VPWFYNYSASGQITAP---------ERTMFGIAVTGANTPAWAKYLFCAAFLFALAWIAR 201 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP- 258 L R I W IRD A + + KLSAFAVSS FIG+AGA F A + Sbjct: 202 NLTRGTIGRKWMAIRDMDIAAEIIGVNPLTTKLSAFAVSSFFIGIAGALFFAVYLGAAEV 261 Query: 259 -DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + F ++ +++ ++I+GG+ S+ A L+ + + L Sbjct: 262 GEAFGIQKSFLILFMIIIGGLGSIFGSFAGAAFLVLLPVFLKNV---LVGGLGWPSDLAA 318 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ + +++ H L +L Sbjct: 319 HIELMIVGALIIGFLILEPHGLAQLWR 345 >gi|282849001|ref|ZP_06258390.1| amino acid or sugar ABC transport system, permease protein [Veillonella parvula ATCC 17745] gi|282581276|gb|EFB86670.1| amino acid or sugar ABC transport system, permease protein [Veillonella parvula ATCC 17745] Length = 337 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 121/309 (39%), Gaps = 19/309 (6%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + + +I + + + G LSL ++GAY IL + L I Sbjct: 3 LLNPYYLQIVMFFIINAIMGISIYFTLA-SGQLSLGAAGFMSVGAYVGAILSLKADLPIV 61 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151 + I + +++ +I+GLP+ + +G YLAIATL E+ + I + G +GI Sbjct: 62 VGIIIGGLVASLVAVIIGLPTTRLKGLYLAIATLGFGEVVRVIFLNLDITNGALGLSGIP 121 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + L + + +LL + L + + + + + A+ Sbjct: 122 SIPQELTNYAYEFDLDGLMGID-AVAWGNLMAIIILLAILVLIIAFCVRINNSRVGRAFA 180 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 I+ + A + +++ K+ AF + + G+ G +A + I+P F + + + ++ Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 + GG + + IL + E+ ++ Y + L ++ Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285 Query: 332 ILMRSHSLL 340 + +R +L Sbjct: 286 MAVRPDGIL 294 >gi|163794271|ref|ZP_02188243.1| inner-membrane translocator [alpha proteobacterium BAL199] gi|159180439|gb|EDP64960.1| inner-membrane translocator [alpha proteobacterium BAL199] Length = 339 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 126/335 (37%), Gaps = 27/335 (8%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQ-KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 K + L++F L +G+++LI+V+FA G ++++G GL S Sbjct: 8 KQTTAWITGPIALSLVVFGTLPLWIESIGLYQYLGVEVLIWVIFALGYNLLLGYTGLPSF 67 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 IGAY++ + ++W + + +++G G L RG Y A+ T+ Sbjct: 68 GHGAFLGIGAYAFGLAQFEVWPNLWFCLIAAFVVTGLFGAATALFLSHRRGIYFALMTIA 127 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 +I+ I KW +T+G+ G+ RL + +YY+ Sbjct: 128 FGQIYYFIASKWTDVTHGEDGLLNIARLPVDL----------GVVELPLAGNAQLYYLCF 177 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + ++ L + R I+ N+ + + K S F +S G+AGA Sbjct: 178 AVYAVLVLLLWRLTNSPYGRVLRAIKQNETRVAFVGYPVGLYKWSVFTLSCGIAGIAGAL 237 Query: 249 FAASRDRISPDMFKFSENIIVISIVIL-GGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 FA +++ ++ + I++ +V++ GG S + ++ + Sbjct: 238 FAMAQEGAYINVMSLQWSGIIVLMVLIGGGFVSFWGPVFGVILYFVARDVLGAYTETW-- 295 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++++ + L + Sbjct: 296 -------------LLWFGLMFVVLVIFKPDGLAGM 317 >gi|297567644|ref|YP_003686615.1| hypothetical protein Mesil_3293 [Meiothermus silvanus DSM 9946] gi|296852093|gb|ADH65107.1| hypothetical protein Mesil_3293 [Meiothermus silvanus DSM 9946] Length = 339 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 114/319 (35%), Gaps = 9/319 (2%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L LG +Y + I + I V+ L + G G+ SL A+GAY+ IL Sbjct: 8 LLAGLGPHFLPEYWVRVLIVLGINVILVSSLGLSNGFTGVFSLGHPGFVALGAYASGILT 67 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 L + ++G + LP+ G A+ ++ + + + Sbjct: 68 LELSKKAAYLPDLPGFLAGVQ--LPFLPATLLAGALCALVASLIGIPLMRLSGNYVSVAT 125 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 + V L R F P + G ++ ++ + + Sbjct: 126 LGFLVIVNVVLVNAERFTRGSRTFTGIP------PYTDLGWVAGWAVVTLLVLSRVAYSP 179 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + A R RD+ A ++ ++ A+L AF + + F G+ GA + SP F + Sbjct: 180 LGRAMRATRDDPIAAQAVGIHLLPARLLAFTIGAFFAGVGGALYGHYLVSFSPATFYVAM 239 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + +++++LGG SL+ + + E+ + + L+ F + Sbjct: 240 LVQQLTMLVLGGQASLTGAVVGVTAITVLSEVLRNLERGFSLGALQVPAVFGASQ-IALG 298 Query: 326 IALFLVILMRSHSLLRLRT 344 LV++ R LL Sbjct: 299 FIFILVMVYRPQGLLGDWE 317 >gi|163859216|ref|YP_001633514.1| branched chain amino acid ABC transporter permease [Bordetella petrii DSM 12804] gi|163262944|emb|CAP45247.1| probable branched-chain amino acid transport system, permease component [Bordetella petrii] Length = 309 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 114/274 (41%), Gaps = 16/274 (5%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + +I +GI+ Y + GL++ G G +S+ + + AY ++ Sbjct: 19 PVILNDPFITHLGIRAATYAIVVMGLTLFAGYTGQISIGHAAFFGLAAYLSGMMVKAGMP 78 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +P++ G G ++G+ L+ G YLA+A++ ++ I Q I+ IT G +G+ Sbjct: 79 YL-VAVPLATAAVGVLGCLVGMLVLRTSGHYLALASIAVAVIIQVIIKN-SDITGGPSGL 136 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 F G ++ S + YY +L F I+ + + +A Sbjct: 137 TGVPAPEFFGWSLTSD--------------LGYYYYVLLCMFAGFIILQRVIDSRTGDAL 182 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 + I +N+ A SL + K+ +F +S+ F AG F I PD + +++ + Sbjct: 183 QAIANNELAAQSLGIPVFRYKVLSFTISTLFAAFAGTLFVHYDGFIDPDRLGLNVSVLFL 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 + +GG+ ++ L + E Y Sbjct: 243 IMTFVGGIGNIYGSVIGAFALTIIEEYAQEFGQY 276 >gi|83954598|ref|ZP_00963309.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83840882|gb|EAP80053.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] Length = 638 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 100/311 (32%), Gaps = 26/311 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ I + + Sbjct: 349 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFVPDYTLSIIIAL 408 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ ++ A G++M + + + TL+ + L + G + Sbjct: 409 PLAFAVTFAAGVVMERLVI-RHLYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSPA 467 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + S + + + I+ L+RT + R + N Sbjct: 468 ---------WLDGAWVISDVIQISYIRIAIFVLALLFLGLILFVLKRTRLGLEVRAVTQN 518 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 S+ + F + S G+AG S + + +V Sbjct: 519 PGMAASMGINPDRINMMTFGLGSGIAGIAGVAIGLYAKVTSEMGADYIVQSFMTVVVGG- 577 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 + ++ +++ + + F+ S + T MV+ + L I R Sbjct: 578 -VGNVWGTLAGASLIGFLQ-----------KGIEWFNPSNTLAAQTYMVLFIILFIQFRP 625 Query: 337 HSLLRLRTPSN 347 ++ + + Sbjct: 626 KGIVAQKGRAA 636 >gi|67643840|ref|ZP_00442583.1| HmgE [Burkholderia mallei GB8 horse 4] gi|121598924|ref|YP_992280.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia mallei SAVP1] gi|167000819|ref|ZP_02266624.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei PRL-20] gi|254175786|ref|ZP_04882446.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei ATCC 10399] gi|254202250|ref|ZP_04908613.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei FMH] gi|254207583|ref|ZP_04913933.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei JHU] gi|121227734|gb|ABM50252.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei SAVP1] gi|147746497|gb|EDK53574.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei FMH] gi|147751477|gb|EDK58544.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei JHU] gi|160696830|gb|EDP86800.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei ATCC 10399] gi|238525280|gb|EEP88708.1| HmgE [Burkholderia mallei GB8 horse 4] gi|243063249|gb|EES45435.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia mallei PRL-20] Length = 316 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 100/310 (32%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ +GA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPELGHV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + +I+ +G + L A + I + Sbjct: 68 ATLTIGLVIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKAGENNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ + M F + + Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + + L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYISNLTGGVFG-----SNYQDVFAFVVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|260425434|ref|ZP_05779414.1| high-affinity branched-chain amino acid transport system permease protein LivM [Citreicella sp. SE45] gi|260423374|gb|EEX16624.1| high-affinity branched-chain amino acid transport system permease protein LivM [Citreicella sp. SE45] Length = 313 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 72/303 (23%), Positives = 126/303 (41%), Gaps = 24/303 (7%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 S+ L ++ A GL++V G G S + IGAY+ I+ G +W+ +P Sbjct: 26 LSVMTLTLTNLVLAVGLNLVAGYCGQFSFAQAAFFGIGAYTTAIMSRDLGTGVWINLPAG 85 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +I+G G+++G+P+L+ +G +LAI T+ + L++W T G+ GI V Sbjct: 86 IIIAGLFGLVLGVPALRVKGHFLAIVTIAFQTVVYLTLVQWTDFTGGQNGILVPG----- 140 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 V Y++ L + ++ + L + + W +RD++ Sbjct: 141 ----VGETSILGIIRFNVQSLDSYYWLTLALAAVAIVVAWRLVHSRLGREWIAVRDDETL 196 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 ++ KLSAF S+AF G AGA A + +PD F + I+++I+ILGG Sbjct: 197 AQAVGVNTTTTKLSAFVASAAFAGAAGALNAYTMRTAAPDDFTIFISSIILAIMILGGKG 256 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + IL + E + Y + L L I + Sbjct: 257 TFLGPIVGAFILTIIPESLGEFSRY---------------KMLFFGVLLILTITFLPGGI 301 Query: 340 LRL 342 ++L Sbjct: 302 MQL 304 >gi|158424626|ref|YP_001525918.1| ABC transport permease protein [Azorhizobium caulinodans ORS 571] gi|158331515|dbj|BAF89000.1| ABC transport permease protein [Azorhizobium caulinodans ORS 571] Length = 294 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 127/306 (41%), Gaps = 18/306 (5%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ ++ I +YV+ A GL++ G G+++ V + +GAY+ IL + + Sbjct: 2 DAYLIAIAIIGALYVLLALGLNLQYGLTGIVNFGHVGFFCVGAYTTAILCEHGVPMV-VT 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 P++A+++ +GL S++ R DY AI +L SE+ + + + +TNG GI + Sbjct: 61 FPLAALLAMLAAWPLGLVSIRLREDYFAIVSLGFSEVVRLVATSERWLTNGVQGIAGIPK 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 ++ + T + + I + + + R+ IRD Sbjct: 121 MFGMLTGTPQALAVLGLLVVLNLIAI--------------AAMWRIVRSPFGRMIEAIRD 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N++A +L K+ + + G+AGA +A I+P+ F + +I+ Sbjct: 167 NEEAVKALGKDPAGFKIQVLVLGAGLAGIAGAVYAHYIGFIAPEQFVPLMTFQIWMAIIM 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ +S IL+ +E + + S ++ +AL L + R Sbjct: 227 GGVGRISGALVGAVILMFFLEGSRFLRDLL---PFISEVSMASVRLGVVGLALILFTMYR 283 Query: 336 SHSLLR 341 L+ Sbjct: 284 PQGLMG 289 >gi|220916638|ref|YP_002491942.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] gi|219954492|gb|ACL64876.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] Length = 368 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 69/350 (19%), Positives = 147/350 (42%), Gaps = 19/350 (5%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 +S R + ++ LL + + + Y+ MG+ + + V+ ++V Sbjct: 6 LSPLPSRAPRGFSVVGLLVFLAVVAALAVFPQFVKKPYVLHMGVLLFLAVIQGQAWNVVG 65 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G S+ + +GAY V+L ++ W + + S +++G + + RG Sbjct: 66 GYAGQYSVGHAAYFGVGAYVTVMLLEVNKIAPWWGVWAAMAASVLLSLVIGSITFRLRGP 125 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 Y +A++ ++EI + + +K +T G G + + + R Sbjct: 126 YFVLASISVAEIIRLATLYFKDLTRGAEGFLLGEIPTLNLFGNEIMFFGKR--------- 176 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Y+V LG+ ++ ++ ++ + + ++ IR++Q A SL + F K A ++S+A Sbjct: 177 -PFYFVGLGLAVVAVAVNWIVQHSKLGYYFQAIREDQDAAHSLGINLSFYKNVALSISAA 235 Query: 241 FIGMAGAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 F +AG F+A I P+ F ++ ++ + I+GG+ ++ +L+ + E+ Sbjct: 236 FTALAGGFYAMFVKFIDPNTVFGLDVSVQIVLLCIIGGIGTIVGPVIGAVVLVPLSEILR 295 Query: 300 GMNFYYFNSLLKFDCSF--------NMRHTTLMVIALFLVILMRSHSLLR 341 +L D F + H + I + LVIL +L Sbjct: 296 NPKGLVQVGVLSPDSGFVTFVERYLSNAHLLVYGILVVLVILFAPEGVLG 345 >gi|83954279|ref|ZP_00962999.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83841316|gb|EAP80486.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] Length = 402 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 130/349 (37%), Gaps = 25/349 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + A + G + + + +I+ +FA G +I+ G G LS + Sbjct: 20 MAAPIILNPFPAGSGLAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGV 79 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G+YS V + +++ I +S +++G +++G SL+ G Y +I TL +++ N+ Sbjct: 80 GSYSAVWMMKLLSMNVIPAILLSVIVAGLFSVVIGFVSLRRSGIYFSILTLAFAQMSFNL 139 Query: 137 LIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP-----------SSFVIYEIFMY 184 PITNG+ G+ +A + + F ++ Y Sbjct: 140 AYSVLTPITNGETGLQIALSDPRILDGANAPSYPNLFGAQMNAATTLDFGAWSFTFSVGY 199 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y+ + L+ I + + R+ R ++ NQ+ L+AF +S + G+ Sbjct: 200 YLCAVIMLLAFYISIRVFRSPFGMMLRAVKSNQQRMNYTGLNTKPYTLAAFVISGMYAGL 259 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG AA + +++ + V+ + ILGG +L + + +N Sbjct: 260 AGGLLAAMDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVLGAGFIKYFENIFSKINDN 319 Query: 305 YFNSLLKFDCSFNMRHTTL-------------MVIALFLVILMRSHSLL 340 + F + + + LV++ L+ Sbjct: 320 VLHGWFAFMPDGLEDTLIMLIHPFVGKGWHLTLGLLFMLVVIFLPGGLV 368 >gi|27381521|ref|NP_773050.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium japonicum USDA 110] gi|27354689|dbj|BAC51675.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium japonicum USDA 110] Length = 577 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 64/334 (19%), Positives = 120/334 (35%), Gaps = 42/334 (12%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 +L FL L ++ IY + A G+ + G G+L L + AI AY Sbjct: 9 VLILAFLLLIPPFMGEFWAYQLGLYFIYGLAALGVGLAWGQAGILPLGQGMFVAIAAYVT 68 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY-----LAIATLIMSEIFQNI 136 G S + + A + +L FRG + ++ TL ++ + Sbjct: 69 AHGLLALGSSPIAYLALPAACVLVAVLAFAFAALVFRGRFEQGPSFSLMTLALTLAAFQV 128 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 W +T G G+ L L + +YY++ + LS + Sbjct: 129 ANGWSSVTGGFNGLRNIPGLPGLDGFLD------------------LYYLIAILLGLSIA 170 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + +L I WR DN++ L + K AFAV+S G+AGA +A ++ + Sbjct: 171 AVDYLVHAPIGVLWRAAADNERRLAFLGYDVAVIKAVAFAVASGLAGLAGALYAPQQNLV 230 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +PD+ F+ + ++ +GG ++ ++ + ++ Sbjct: 231 TPDLAGFAFSGDLVIFAAVGGRATVLGPVIGAVVVGVLSAELRDRFPWWEIG-------- 282 Query: 317 NMRHTTLMVIALFLVILMRSHSLL----RLRTPS 346 + + +V+L L+ LR S Sbjct: 283 -------IALFFIVVVLRLPGGLMTMLAPLRRFS 309 >gi|86748918|ref|YP_485414.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86571946|gb|ABD06503.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 542 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ S L S +I+ ++ Sbjct: 263 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQETIRTSYPALFDYSLLIAVPLAFLVA 322 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 ++ + + +L W + + S Sbjct: 323 GAIGVLIER--SVIRFLYGRPLETLLATWGLSLILQQAVRTLFGPTNREVGNPSW-MSGA 379 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++L + ++ LR TA+ R + N++ S+ Sbjct: 380 FELGQITITYNRLWILCFTLAVFVILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 439 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 440 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFTL 497 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + +++ + L I R L L+ + Sbjct: 498 GIANKFLEPVAGAVLAK-------------IAILVLIILFIQKRPRGLFALKGRAVE 541 >gi|270292332|ref|ZP_06198543.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270278311|gb|EFA24157.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 318 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L + L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNILWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + + + + A+ISGA +++G+P+L+ +GDYLA+ATL Sbjct: 66 HAGFMAIGAYAAAIIGSKSPTYGAFFGAMLLGALISGAVALLVGIPTLRLKGDYLAVATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +SEI + +I +TNG AGI + Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ L R+ I + ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YLFVIITTIATLNFLRSPIGRSTLSVREDEIAAESIGVNTTKIKIIAFVFGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F +I V+ IV+ GG+ S++ + +L + L + Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305 >gi|121605843|ref|YP_983172.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120594812|gb|ABM38251.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 333 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 114/324 (35%), Gaps = 22/324 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L L + Y + ++++Y +FA L ++VG+ GL+ + IGA Sbjct: 10 LFVLLAFAGLALYPLMAGNYGIDLVTKMMVYAIFALSLELLVGTTGLICFGQAAFFGIGA 69 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ V+L ++ L + + +++ A + I + ++ Sbjct: 70 YAAVLLPAQTDAPSLLWLLPACVLAAAVYALAVGALSLRTKGAYFIMVTLAFAQMAYYVV 129 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 P+ G GIY+ + + +Y L M + Sbjct: 130 HDTPLGGGTDGIYLTLKPVLGTLIDLDK-------------PLVLYGFTLLMLAGVFGFL 176 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ A IR N++ + + KL+AF +S G+AG FA ++P Sbjct: 177 ALLARSRFGRALAGIRVNEQRMRATGFSTYPYKLAAFVISGGIAGLAGFLFAVKDGFVNP 236 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +M + + V+ ++ILGG+ L + E F Sbjct: 237 EMMSWHLSGAVLIMIILGGLGHLRGALIGAFAFALLQEFFKS---------EAVFGDFAR 287 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +++ +++ L+ L Sbjct: 288 HWHLGLGLSIIASVVLLPRGLVGL 311 >gi|254472941|ref|ZP_05086339.1| branched-chain amino acid ABC transporter, permease protein [Pseudovibrio sp. JE062] gi|211957662|gb|EEA92864.1| branched-chain amino acid ABC transporter, permease protein [Pseudovibrio sp. JE062] Length = 358 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 13/327 (3%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L VV +++ S+ ++ + +LIY + + GL+I+ G G LSL + Sbjct: 27 VLLVVILATMYVIFPMFASEFTYKALLVPVLIYSLASLGLNILTGYAGQLSLGTAGFMGV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ I ++I + + +S S A G+ GLPSL+ +G YLAIATL Sbjct: 87 GAYACYKITTIFPEMNIVIALFLSGFFSAAVGVAFGLPSLRIKGFYLAIATLASQFFLVW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + KW + N VR++ F + + YY +LG+ + Sbjct: 147 LFEKWAWLYNYN---------ASGAIEVRTMDIFGLVVTGPNASPMVQYYFVLGIVSVVT 197 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 ++ L R W+ +RD A + ++ AKLSAFAVSS +G+AGA + Sbjct: 198 FAMINLTRGRYGRTWKAVRDMDIAAELVGINLMRAKLSAFAVSSYIVGIAGALMVFFWKG 257 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 P++F + ++ I I+GG+ S+ +++ + + + S+ Sbjct: 258 AAEPNLFDIPMSFQIVFIAIIGGLGSVMGNFLGAILIVALPVVLNLLPEILGISIGS--A 315 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + ++ + + +++ H L R Sbjct: 316 TMEHVNVMVVGSLIIMFLIVEPHGLAR 342 >gi|300690835|ref|YP_003751830.1| transmembrane abc transporter protein [Ralstonia solanacearum PSI07] gi|299077895|emb|CBJ50534.1| putative transmembrane abc transporter protein [Ralstonia solanacearum PSI07] Length = 341 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 120/330 (36%), Gaps = 27/330 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L Y+ G Q+LI +FA L +V+G G++SL + +GAY+ Sbjct: 32 IAFWCVPVLVFFILPDYLV-FGSQVLIVGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L + + +A+++ G + ++ + + TL + + K Sbjct: 91 GLLAAHGWGEPLSGLFAAAVVAALAGFCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ LG F + Y L + F ++ L Sbjct: 151 FLTGGVDGLSGVTMETLLG------------SFEFDLSGRTAYVYSLAVLFGVFVLLRRL 198 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ + R I+ +L + ++AF VS+A G+AG A + + D Sbjct: 199 VRSPFGLSLRGIQQGPGRMPALGADVRMRLVAAFTVSAAIAGVAGGLLAQTTQFVGLDAL 258 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 FS + ++ +++LGG L A+ + ++ G+N + Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALVGAAVFMLAQDVLAGIN--------------PVYWQ 304 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L +++L +L + R Sbjct: 305 FWIGLLLMVIVLFARGGILGGLESAVRAWR 334 >gi|194336882|ref|YP_002018676.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1] gi|194309359|gb|ACF44059.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1] Length = 331 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 67/342 (19%), Positives = 130/342 (38%), Gaps = 28/342 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L V+ + + Y + I +L+ + +++ G G S + Sbjct: 4 IALIVILAAIAAVVPLFMGENPYFTGILISVLMMAALSSAWNLLGGYAGQYSFGHAAYFG 63 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ +IL + Y L+ L + +++ +I G + RG Y A+A++ ++EI + Sbjct: 64 AGAYTTMILITLYNLNPVLCMAAGMVVACIIALITGSIVFRLRGHYFALASIAVAEIVRL 123 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ ++ T G GI ++D + + YY +L + +S Sbjct: 124 SVLNFE-FTGGAQGILLSDL---------------SLWGLDLNSKNPFYYGMLLVLVVSL 167 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I +LR++ + IR++Q A SL + F K A +S+A + G+ + Sbjct: 168 GITAYLRKSKTGFYLQAIREDQDAAASLGINLSFYKNKALLISAALTSVLGSLYGLYIRF 227 Query: 256 ISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC-----------GMNF 303 I +I +I I+GG+ +L +L+ + E+ G+ Sbjct: 228 IDTSAVLDLRLSIEIILTAIIGGVGTLWGPVIGAVLLVPLAEMLRSNFIGDALVKAGLVS 287 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L + H + I L IL +L L Sbjct: 288 ETSGMGLFLKENLAHAHVLVYGIITVLCILYLPKGILGLFRR 329 >gi|53718562|ref|YP_107548.1| putative amino-acid transport permease [Burkholderia pseudomallei K96243] gi|76809871|ref|YP_332555.1| putative amino-acid transport permease [Burkholderia pseudomallei 1710b] gi|126453328|ref|YP_001065270.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia pseudomallei 1106a] gi|134281125|ref|ZP_01767834.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 305] gi|167718473|ref|ZP_02401709.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei DM98] gi|167814642|ref|ZP_02446322.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 91] gi|167844673|ref|ZP_02470181.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei B7210] gi|167901655|ref|ZP_02488860.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167909905|ref|ZP_02496996.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 112] gi|217420208|ref|ZP_03451714.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 576] gi|237811185|ref|YP_002895636.1| ABC transporter, hydrophobic amino acid uptake transporter [Burkholderia pseudomallei MSHR346] gi|242316192|ref|ZP_04815208.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1106b] gi|254190868|ref|ZP_04897375.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254196687|ref|ZP_04903111.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei S13] gi|254260376|ref|ZP_04951430.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1710a] gi|52208976|emb|CAH34915.1| putative amino-acid transport permease protein [Burkholderia pseudomallei K96243] gi|76579324|gb|ABA48799.1| putative amino-acid transport permease protein [Burkholderia pseudomallei 1710b] gi|126226970|gb|ABN90510.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1106a] gi|134247431|gb|EBA47516.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 305] gi|157938543|gb|EDO94213.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|169653430|gb|EDS86123.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei S13] gi|217397512|gb|EEC37528.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 576] gi|237505296|gb|ACQ97614.1| ABC transporter, hydrophobic amino acid uptake transporter [Burkholderia pseudomallei MSHR346] gi|242139431|gb|EES25833.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1106b] gi|254219065|gb|EET08449.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1710a] Length = 316 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 100/310 (32%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ +GA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPELGHV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + +I+ +G + L A + I + Sbjct: 68 ATLTIGLVIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKAGENNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ + M F + + Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + + L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|217967323|ref|YP_002352829.1| inner-membrane translocator [Dictyoglomus turgidum DSM 6724] gi|217336422|gb|ACK42215.1| inner-membrane translocator [Dictyoglomus turgidum DSM 6724] Length = 327 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 109/312 (34%), Gaps = 24/312 (7%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + I I + A L+++ G G S+ A G Y L +G I L Sbjct: 25 NPYFYQILIFWGINSILAMSLNLINGFTGQFSIGHAGFMAAGGYLSAALTIYHGDKIIKL 84 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + L A L + + +K + G R Sbjct: 85 LS----FMPESISKNIAFFIFLIAGGLFSALLGIIIGIPTLRLKGDYLAIATLGFGEIIR 140 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + V I ++ ++ F+ ++ + ++ A +IR+ Sbjct: 141 VIIYNMDVVG-----GARGFPGIPQLTNSVWVMFWAFICFIVLYRMINSSHGRAIISIRE 195 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A ++ + K+ AF++ + F G+AG F + P F F ++ ++ +++L Sbjct: 196 DETASEAMGVNTTYYKVLAFSIGAFFAGVAGGLFGHYLMLLHPASFTFMRSVEILLMIVL 255 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ SL+ +L + E G + + + L +++L+R Sbjct: 256 GGLGSLTGSIIGAFVLTVLPEALRGF---------------SSLRLIIYSLTLIVLMLIR 300 Query: 336 SHSLLRLRTPSN 347 L+ + S Sbjct: 301 PTGLMGNKEISL 312 >gi|121611125|ref|YP_998932.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121555765|gb|ABM59914.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 346 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 53/331 (16%), Positives = 120/331 (36%), Gaps = 19/331 (5%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + L ++ L L Y ++ + LIY + A L +V+G ++S Sbjct: 27 RRTWVALVGLFLLALVPTGAEVSGTPYAINLATRFLIYGLAAVSLDLVLGYGAMVSFGHA 86 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + +G Y I+ + + +M + + +A Sbjct: 87 MFFGVGGYVVAIVAHHALEAGPVFGWSGSMQALVVWPLALACCGLLGAAVGYLALRTRGV 146 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F I + + + + + G + + P + + YY+ LG+ Sbjct: 147 QFIMITLAFGQLVY----FVLMSLQVYGGDDGLLMSQRNVVPGLDLDDPVVFYYLCLGLL 202 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + + + + +R +++ +L +LSAF +S+ G+AG +A Sbjct: 203 AAWTFLCARVVGSRFGMVLQALRQSERRAVNLGVAPTPYRLSAFVLSAIGTGLAGVLWAN 262 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ++PDM ++++ +++IVILGG+ +L A+ +G+ + ++ Sbjct: 263 YAGLVTPDMASWTQSGELMAIVILGGVGTLLGPIAGAAVFLGLEQALAAWTEHW------ 316 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +M L +V+L + L Sbjct: 317 ---------MLVMGPILVIVVLAGRNGLFGR 338 >gi|316932996|ref|YP_004107978.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315600710|gb|ADU43245.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 339 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 69/310 (22%), Positives = 128/310 (41%), Gaps = 30/310 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 ++ +I +LIY + L+I+ G G SL YA+GAY+ IL +G+ Sbjct: 39 APLFAKNFIIFQMTMVLIYAIAVLALNILTGGSGQFSLGQSAFYAVGAYTSAILLENFGV 98 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IKWKPITNGKA 148 + L +P+S I CG + GLP+L+ G YLA+AT ++ +L ++ T G Sbjct: 99 NYALTLPISGAICFICGYLFGLPALRLSGIYLALATFALATAMPQLLKLHYFEHWTGGVQ 158 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ + G + + +YY +L + + + L ++ Sbjct: 159 GLVITKPDAPFGLPMSQDMW--------------LYYFVLVVSMVIYVASVNLLKSRSGR 204 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A IRDN+ A ++ + K AF +S+ G+AG A + ++PD + I Sbjct: 205 AMMAIRDNEIAASAMGVDVARYKTLAFGISAGITGVAGGLGAIAVQFVAPDSYTIQLAIA 264 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 + +++GG+ L A ++ V + + + + + L Sbjct: 265 LFLGMVVGGVGWLPGSIVGAAFIVFVPNIAEEFSKGLSGA--------------VFGVIL 310 Query: 329 FLVILMRSHS 338 L+I + H Sbjct: 311 VLIIFLLPHG 320 >gi|294101170|ref|YP_003553028.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261] gi|293616150|gb|ADE56304.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261] Length = 288 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 124/305 (40%), Gaps = 40/305 (13%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + + + I + A G+S++ G G+ SL A+GAY+ IL YG+ Sbjct: 2 SGYTEGIITLLCINAIAAMGVSLLTGFTGIFSLGHAAYMALGAYTSAILTVHYGVHWLPA 61 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + ++ +G+P+L+ GDY AIA++ + E + IL W+ +T G G + Sbjct: 62 ILLGGGVAVIVAYGIGIPTLRLMGDYFAIASIGLGEAIRLILENWQSLTRGARGYPGIEP 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L V L + A + L + A++ RD Sbjct: 122 YTTLP-------------------------VALTFFVIMALCMFNLINSRYGRAFKACRD 156 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A L ++ + +S+ + G+AGA A I P MF ++ + ++V+ Sbjct: 157 DYVAASLLGFHTARLRVLSLMISAFYCGVAGALLAGFLSFIQPIMFDMLKSTELTAVVVF 216 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S++ T ++ V EL ++ Y + L +++++R Sbjct: 217 GGLGSMAGTMVGTLVITLVTELFRPISQY---------------RMLIYGAVLVIIMVIR 261 Query: 336 SHSLL 340 ++ Sbjct: 262 PEGIM 266 >gi|110669068|ref|YP_658879.1| ABC-type branched-chain amino acid transport system, permease protein II [Haloquadratum walsbyi DSM 16790] gi|109626815|emb|CAJ53283.1| ABC-type branched-chain amino acid transport system, permease protein II [Haloquadratum walsbyi DSM 16790] Length = 354 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 126/326 (38%), Gaps = 38/326 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V+ ++ L Q Y ++ ++ ++ + A I+ G G S + + IG Sbjct: 35 LLVIGTVIGALPPILGLKQGYYMTVISEMFLFAILALSWDIIGGQTGYPSFGNMAFFGIG 94 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL + + + + + +A ++ +++G L+ RG Y AIATL + Q + Sbjct: 95 AYTTAILTKDFSIILPIAMMAAAGVAVGSAVLIGAAVLRLRGHYFAIATLGVLLATQQV- 153 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + IT G +G + YY + A++ Sbjct: 154 SRILDITGGASGKILLQTPS----------------------GTVFYYFFFTVLVAEAAL 191 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +L T IRD++K ++ + K +A+ +S+ F G+AG ++ I+ Sbjct: 192 VYYLSNTRFGFVLNAIRDDEKKATAMGFNTTYYKTAAWVLSAFFTGLAGGGYSLFNTFIN 251 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P + N+ +I++ ++GG +++ L V+E +F Sbjct: 252 PQTAYNAAWNVELIAMALIGGSGTVTGPIIGAFGLHVVIEYVET--------------AF 297 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 L+ + + ++ + Sbjct: 298 VGWQLVLLGLVVIGTVIGFPDGITGT 323 >gi|291296747|ref|YP_003508145.1| inner-membrane translocator [Meiothermus ruber DSM 1279] gi|290471706|gb|ADD29125.1| inner-membrane translocator [Meiothermus ruber DSM 1279] Length = 356 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 132/324 (40%), Gaps = 20/324 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + ++ + + +Y + QILI + GL ++VG G +SL IGA Sbjct: 38 FWLAVAIIGVLVLPLLLPQYPLFVTTQILIAALAGLGLHLLVGGAGQISLGQAAFVGIGA 97 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y L L I +++ G+++G+PSL+ +G YLAIATL + + Sbjct: 98 YVSSHLSGDLA---PLGILAGGLVAALIGIVLGIPSLRIKGAYLAIATLAFQFLADYVFK 154 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W T G AG + F + + +YY+ L Sbjct: 155 RWTAFTGGVAGRSLPAEGT--------------FLGLPLADDRVVYYLGLVFAIPMFFYA 200 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L T AW +RDN + ++ +KL+AFA+S+ + G+AG ++P Sbjct: 201 KRLLSTRAGRAWFAVRDNDLSAQLSGVDLVRSKLTAFALSAFYGGIAGGILMHLIGAVTP 260 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F + +I ++IVI+GG ++ ++ + E+ + + + + Sbjct: 261 ENFVLAFSIQYLAIVIVGGAGTVLGAVLGALFIVLIPEILSVIAGAFGPQYVA---QLSA 317 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + + L +++ L+ L Sbjct: 318 WRSVAFGVLILLFLILEPRGLVGL 341 >gi|163792681|ref|ZP_02186658.1| ABC transporter permease protein [alpha proteobacterium BAL199] gi|159182386|gb|EDP66895.1| ABC transporter permease protein [alpha proteobacterium BAL199] Length = 345 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 77/326 (23%), Positives = 126/326 (38%), Gaps = 30/326 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A +L + + +L Y + GL+I+ G G SL +AIGA Sbjct: 29 AATAIAILVAVVLPWTLGSFQTFQITLVLFYAIAILGLNILTGFNGQFSLGHSAFFAIGA 88 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL- 137 Y+ IL RYG+S +L IPV+ + A G + G P+L+ G YLA+AT +S +L Sbjct: 89 YTTAILVERYGVSTYLTIPVAGGLGFAAGFLFGFPALRLSGLYLALATFALSVATPQLLK 148 Query: 138 -IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ T G GI + + YYV L + + Sbjct: 149 YNHFEDFTGGVQGINLLKDSAPFDLPFSVDQWW--------------YYVTLAITLFAFW 194 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L + A IRDN A ++ K F VS+ +AGA A + + Sbjct: 195 MARNLINSRTGRAIMAIRDNPIAAATMGVNTALYKTLTFGVSALLTAVAGALSAIVVEYV 254 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +PD F F ++ + +++GG+ + A ++ V L G++ Sbjct: 255 APDSFTFVLSVYFLIGLVIGGVGWIPGAVIGGAFVLYVPNLAEGISTGLAG--------- 305 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 L + + LVI + L Sbjct: 306 -----VLFGVIILLVIYLMPSGAAGL 326 >gi|83949675|ref|ZP_00958408.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83837574|gb|EAP76870.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 409 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 56/371 (15%), Positives = 127/371 (34%), Gaps = 39/371 (10%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGAT----KSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + I+ + ++ P +L F T + + +I+ + G +I+ G G Sbjct: 9 TRLFLIVAAMTLLAPFILNPFPEGTAMAQMFNAGYPDLMQRFVIFGILVIGFNILFGLTG 68 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 LS +G+Y+ V + G+++ I +S +++G +++G SL+ G Y +I Sbjct: 69 YLSFGHAAFLGVGSYAAVWMFKLVGMNVVPAILLSMVVAGLFALLIGYVSLRRSGIYFSI 128 Query: 125 ATLIMSEIFQNILIKWKPIT----------------------NGKAGIYVADRLYFLGTT 162 TL +++ N+ G++ Sbjct: 129 LTLAFAQMSYNLAYSVLGNPASNFNLTNGETGLQLLLDDPRVLGESVTADGSIPVTNFFG 188 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + F ++ YY+ + +S I + + R+ R ++ NQ+ Sbjct: 189 IAMRDSFNLEIGGWLFTFNAGYYLAGIIMLISFYISIRIFRSPFGMMLRAVKSNQQRMNY 248 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + L+AF +S + G+AG ++ + ++ + ++ + ILGG+ +L Sbjct: 249 TGLSSRPYTLAAFVISGIYAGLAGGLLSSMDPLAGAERMHWTASGEIVIMAILGGVGTLI 308 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALF 329 + +N + L F + + Sbjct: 309 GPILGAGFNEYFKNILSKINDEVLHQWLSFMPDGLENAFVGVLHFFVGKGWHLSLGLLFM 368 Query: 330 LVILMRSHSLL 340 +VI+ L+ Sbjct: 369 MVIIFLPGGLV 379 >gi|126440035|ref|YP_001058034.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Burkholderia pseudomallei 668] gi|167737523|ref|ZP_02410297.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 14] gi|167823110|ref|ZP_02454581.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 9] gi|167893202|ref|ZP_02480604.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 7894] gi|167917927|ref|ZP_02505018.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei BCC215] gi|226194536|ref|ZP_03790134.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|254181480|ref|ZP_04888077.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1655] gi|126219528|gb|ABN83034.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 668] gi|184212018|gb|EDU09061.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei 1655] gi|225933621|gb|EEH29610.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia pseudomallei Pakistan 9] Length = 316 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 100/310 (32%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ +GA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPELGHV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + +I+ +G + L A + I + Sbjct: 68 ATLTIGLLIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKAGENNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ + M F + + Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + + L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|332286072|ref|YP_004417983.1| putative branched-chain amino acid transport system permease protein [Pusillimonas sp. T7-7] gi|330430025|gb|AEC21359.1| putative branched-chain amino acid transport system permease protein [Pusillimonas sp. T7-7] Length = 309 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 67/319 (21%), Positives = 122/319 (38%), Gaps = 31/319 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + + + + ++ MGI+ + GL++ +G G +SL + + AY Sbjct: 9 LAAIAALVLVPLILNDPFLTHMGIRATTAAIVVMGLTLFIGYTGQISLGHAAFFGLAAYI 68 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 IL + ++ + G G I+GL L+ G YLA+A++ + I Q ++ Sbjct: 69 SGILMKSGFP-FLGSVAIATISVGILGCIVGLIVLRTSGHYLALASIAVGVILQTLVKN- 126 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 IT G +G+ G T+ S + YY++L + I+ Sbjct: 127 SSITGGPSGLTAVPSPSLFGWTLNSDLM--------------YYYMVLLCMVVGFIILRR 172 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + +A R+I +N+ A SL + K+ +F VS+ F AG F I PD Sbjct: 173 ITDSRTGDALRSIANNELAAQSLGIPVFKYKVLSFTVSTMFAAFAGTLFVHYDGFIDPDR 232 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 +I + +GG+ +L + + E G Y Sbjct: 233 MGLPISIFFFVMAFIGGIGNLYGSIIGAFAITILEEYAQGFGNYNV-------------- 278 Query: 321 TTLMVIALFLVILMRSHSL 339 + + L +VIL L Sbjct: 279 -LVYGLLLAIVILFLPKGL 296 >gi|284044243|ref|YP_003394583.1| inner-membrane translocator [Conexibacter woesei DSM 14684] gi|283948464|gb|ADB51208.1| inner-membrane translocator [Conexibacter woesei DSM 14684] Length = 350 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 111/331 (33%), Gaps = 19/331 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L + L++ + + +D + L+ ++ GL I VG+ G+ S V Sbjct: 9 LPTLIALVALVVLATVVGSTGGPAMDRVVTVALMNLVLVVGLWIFVGNSGVFSFGHVGFA 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AIGAY+ +L L+ + ++I+ L L Sbjct: 69 AIGAYAGGLLTIPPEQKPLLIEGIPSVIAELHASAPVAVLAGGLLAALVALVLSFP---- 124 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY-VLLGMCFL 193 + A + + L + + + + L Sbjct: 125 -----LMRLNGLAAAMSLFAVLVIVNVVLSNWNQLTNGTGGISGIPATTTTGTALVWAIA 179 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + +I ++T + R R+++ A + ++ + +AF +S+ G+AGA + Sbjct: 180 AIAIAFVFQQTRWALRLRATREDEPAARAAGIGVLTERSAAFVLSAFVAGVAGALYGQFL 239 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I+P F S + ++++GGM SLS + EL Sbjct: 240 GSITPGAFYLSLTFTTMVMLVVGGMRSLSGAVLGAIAMSFAAELLRQFGASVGK------ 293 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + + ++++R LL R Sbjct: 294 ---PSLRDLGLALIMVAILVIRPQGLLGERE 321 >gi|119946609|ref|YP_944289.1| ABC transporter inner-membrane translocator [Psychromonas ingrahamii 37] gi|119865213|gb|ABM04690.1| ABC transporter inner-membrane translocator [Psychromonas ingrahamii 37] Length = 390 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 102/348 (29%), Gaps = 33/348 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + L V L F Y S+ + L Y + A + +V G G+LSL Sbjct: 24 FITTLYVTVCNLAFAPGSFFYVSNYTVSLLGKYLCYALLALAVDLVWGYCGILSLGHGAF 83 Query: 74 YAIGAYSYVILGSRYG-----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 +A+G Y+ + R + + + + G L + Sbjct: 84 FALGGYAMGMYLMRQIGDRGVYGNPDLPDFMVFLNWTELPWYWAGSDNVLFMVLLVFAGP 143 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPS 174 + I + + ++ + A L F + F F Sbjct: 144 GLLAYIFGTMAFRSRVSGVYLSIITQAMTYALMLSFFRNEMGFGGNNGLTDFKEIFGFSL 203 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 ++ ++ ++ ++ + + IRD + + K+ Sbjct: 204 QSPDTKLALFVATAVALAFGYAVSHFIVNSKMGRVVTAIRDAEDRVRFVGYKPQHYKVWI 263 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F VS+ G+AGA + I+P F +I ++ V +GG +L ++ Sbjct: 264 FVVSAMLAGLAGALYVPQVGMINPGEFSPLNSIEIVIWVAIGGRGTLYGAIIGAVVVSYA 323 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F + LV L+ + L Sbjct: 324 KT--------------RFTAIMPEVWLFGLGGLFVLVTLLLPKGIAGL 357 >gi|149203677|ref|ZP_01880646.1| inner-membrane translocator [Roseovarius sp. TM1035] gi|149142794|gb|EDM30836.1| inner-membrane translocator [Roseovarius sp. TM1035] Length = 327 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 110/328 (33%), Gaps = 15/328 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L A++ LLLF + ++ ++ + +I + GL+I +G GL+S + + Sbjct: 6 LLNAALMAILLLFPLYAWATDEPFLITLTTRAVILAIAGVGLNIALGFGGLVSFGHALFF 65 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +G Y+ IL + + ++ + + + Sbjct: 66 GLGGYAMGILAYHAQTYTSVTDWPLTIPGTKSMPVIWIIATLTSALAALAVGALSLRTTG 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + + G S+ FP + I + + G+ L Sbjct: 126 VYFIMITLAFSQMFYYFAISWPAYGGEDGLSIYVRNGFPGLNTMDPIQFFALCYGLLALI 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L R+ R N+ ++ L AF +S A G+AGA FA Sbjct: 186 LFFTARLARSPFGLMLGAARQNEARVAAIGQRPYRLYLIAFTLSGAITGLAGALFADLNR 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP MF + + ++ VILGG+ + A+ I + G++ Y+ Sbjct: 246 FVSPVMFSWQTSGEIMVFVILGGVGRVFGPVAGAALFILLEHSLGGLSDYWH-------- 297 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L +L L L Sbjct: 298 -------IYLGAILLGTVLFARGGLFGL 318 >gi|148508167|gb|ABQ75958.1| ABC-type branched-chain amino acid transport system, permease protein II [uncultured haloarchaeon] Length = 354 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 126/326 (38%), Gaps = 38/326 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V+ ++ L Q Y ++ ++ ++ + A I+ G G S + + IG Sbjct: 35 LLVIGTVIGALPPILGLKQGYYMTVISEMFLFAILALSWDIIGGQTGYPSFGNMAFFGIG 94 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL + + + + + +A ++ +++G L+ RG Y AIATL + Q + Sbjct: 95 AYTTAILTKDFSIILPIAMMAAAGVAVGSAVLIGAAVLRLRGHYFAIATLGVLLATQQV- 153 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + IT G +G + YY + A++ Sbjct: 154 SRILDITGGASGKILLQTPS----------------------GTVFYYFFFTVLVAEAAL 191 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +L T IRD++K ++ + K +A+ +S+ F G+AG ++ I+ Sbjct: 192 VYYLSNTRFGFVLNAIRDDEKKATAMGFNTTYYKTAAWVLSAFFTGLAGGGYSLFNTFIN 251 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P + N+ +I++ ++GG +++ L V+E +F Sbjct: 252 PQTAYNAAWNVELIAMALIGGSGTVTGPIIGAFGLHVVIEYVET--------------AF 297 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 L+ + + ++ + Sbjct: 298 VGWQLVLLGLVVIGTVIGFPDGITGT 323 >gi|288920918|ref|ZP_06415213.1| inner-membrane translocator [Frankia sp. EUN1f] gi|288347679|gb|EFC81961.1| inner-membrane translocator [Frankia sp. EUN1f] Length = 403 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 69/333 (20%), Positives = 128/333 (38%), Gaps = 10/333 (3%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L + + ++ G + V+ A GL+++ G+ G LSL A+GA SY Sbjct: 22 VALFAIAVVIPFYADEFWLRTGFAVFAAVIGAVGLNLLSGTTGQLSLGHAFFLAVGAISY 81 Query: 82 VILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 L L + ++ +SG G++ + + RG YLAIA+L + Q Sbjct: 82 SFLSGEGSGGISGLGLPPLLAMIIAVAVSGLAGLLFSPVAARVRGLYLAIASLGLVVAGQ 141 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +IL P+T G G G + ++Y+ L + LS Sbjct: 142 HILNTATPLTGGFNGRS-VPDFSLPGFSFSDSDPDLTVLGVPFGQAERLWYLGLLLAALS 200 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L R A +RDN A + + AF +SS + G++G +A S Sbjct: 201 IIFANNLLRGRSGVALEAVRDNPLAAAVNGVDVAAYRARAFLLSSMYAGLSGVLYALSVG 260 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKF 312 ++P+ F ++ + +++LGG+ S+ A A + + + + + ++ Sbjct: 261 SVAPESFTIEVSVQYLVMIVLGGLGSMGGAAAGAAFVTALPLVLQQYSDSLPFLSAPGSG 320 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 S+ A+ L++L+ L Sbjct: 321 GVSYADAARFAYGAAVVLIVLVEPTGAAGLARR 353 >gi|282898417|ref|ZP_06306408.1| inner-membrane translocator [Raphidiopsis brookii D9] gi|281196948|gb|EFA71853.1| inner-membrane translocator [Raphidiopsis brookii D9] Length = 381 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 102/347 (29%), Gaps = 27/347 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 K ++ + V+ LL L + ++ ++ + L + GL ++ G GLLS Sbjct: 12 QAKKSILVEIAVVMAIALLLLVIMPLVLTEFRLNLLGRFLSLAIVGLGLDLIWGYTGLLS 71 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L I + +G Y+ + S L + I Sbjct: 72 LGHGIFFGLGGYAIAMYLKLQVPSGELPDFMGLYGVTELPWFWHPFYSFGFAVIAVILIP 131 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF-------------RFPS 174 + L+ I I + + F Sbjct: 132 GLLAGVLGYLVFRNRIKGVYFSILTQAAVIIFFNFFNGQQKLFNGTNGLTAFKTLLGVSL 191 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + ++ +Y + + L+ + WL IRD++ K+ Sbjct: 192 NDRGMQLVLYSLTIVFLILTYGLFRWLTSGRFGRLLMAIRDDETRVRFCGYDPTEYKVLV 251 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 FAVS A G+AGAF+A +SP +I ++ V +GG +L+ T ++ Sbjct: 252 FAVSGAIAGIAGAFYAIQSGSVSPRAMDIGFSIEMVIWVAVGGRGTLTGAILGTLLVNYA 311 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +V+ + ++ Sbjct: 312 RTFLSE--------------QFAEIWLFFQGALFLVVVTVLPDGMMG 344 >gi|254489249|ref|ZP_05102453.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] gi|214042257|gb|EEB82896.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] Length = 822 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 108/265 (40%), Gaps = 18/265 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L+ L L + + I+I+ +FA L ++G GL+S + GA Sbjct: 313 LLVAFGLVILGLLPLYGSNFSVVLVTDIMIFCLFAASLHFMLGQGGLVSFGHAAFFGGGA 372 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ + + + L + ++ + +G +++G L+ G Y A+ TL ++ ++ Sbjct: 373 YAAALFVTYADTPMELALILAPLCAGLAAIVIGWVCLRSTGVYFAMLTLAFGQLLWSLAF 432 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W +T G G+ +PS++ YY+ +C ++ Sbjct: 433 QWGDVTGGDDGLVNI------------------WPSAWASDNSVYYYIAFILCVGGILLL 474 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 A R RD+ + ++ + AF + G+AG F S+ I P Sbjct: 475 RQAAHAPFGYAMRAARDSARQAEAMGINTKHIQWVAFTFAGTMAGLAGGLFVFSKGSIFP 534 Query: 259 DMFKFSENIIVISIVILGGMTSLSK 283 + + + + + +V LGG+ +LS Sbjct: 535 NELETARSFDALIVVFLGGVKTLSG 559 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 99/308 (32%), Gaps = 28/308 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96 I + M A GLS++ G +++ Y +GAY + + W I Sbjct: 8 ILTGLANAGALFMVASGLSLIFGVTRIVNFAHGSFYMLGAYVGYSLMQVLPGVVGFWGAI 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ +I G G+I+ + L+ + L+ + ++ + G + Sbjct: 68 LLAGLIVGLIGVIVEVCVLRPVYSAPELFQLVATFGVILVIQDLALMIWGPQDLLGPRAP 127 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + +++ F++ ++ + RT + R + Sbjct: 128 GLKGV----------IRIMGEPVPQYDIALIIITPFVALALWYLITRTRVGVLVRAATQD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + F + A G+ GA + F+ V +V++G Sbjct: 178 REMVSALGVNQAWLFTGVFFLGCALAGLGGALQLPKGGA--DLLMDFTILGAVFVVVVIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL A I+ + LM + + +V++ R Sbjct: 236 GMGSLPGAYLAAVIISVLNVFGVTYA--------------PQSTLVLMFLVMIVVLMFRP 281 Query: 337 HSLLRLRT 344 LL Sbjct: 282 FGLLGKEE 289 >gi|239906903|ref|YP_002953644.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239796769|dbj|BAH75758.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 335 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 121/323 (37%), Gaps = 19/323 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L L + + I + Y ++V G G+L L + IG Sbjct: 9 ILLAVVALAAFGLPLVVTSPTYLQILILLFFYAYLTTAWNLVGGFAGVLPLGHSVFVGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL +YG+S W+ + V I+ G+I+GLP+ + RG Y + T+ +E + ++ Sbjct: 69 AYTSSILTLQYGVSPWIGMLVGGAIAAVIGVIIGLPTFRMRGAYFCLCTIAFAEGIRVMV 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + G + L + F+ + + ++ YY++L + L + Sbjct: 129 ENIDTL-----GPLKINGPRGLLVPLLKDPTFWDYQF---MSKLPYYYIILVLLILVLAF 180 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRI 256 ++ R+ I + A +L + KL A A+S +AG F+A Sbjct: 181 TWFVSRSKIGYYLAAGGEEPDAAAALGINVANYKLFAMALSCFLTALAGTFYAQLMLYFY 240 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + I ++GG +++ +L + E Sbjct: 241 PKGLMGLDLSFEIAFIALIGGRGTIAGPVIGALLLRPLNEFTRIYLSDMLPG-------- 292 Query: 317 NMRHTTLMVIALFLVILMRSHSL 339 H + + L LV++ L Sbjct: 293 --LHLVIFGLILILVMIYLPKGL 313 >gi|83647208|ref|YP_435643.1| branched chain amino acid ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83635251|gb|ABC31218.1| Branched-chain amino acid ABC-type transport system, permease components [Hahella chejuensis KCTC 2396] Length = 559 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 93/306 (30%), Gaps = 21/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ A GL+I G +G++++ +GAY+ ++ I + V+ Sbjct: 274 ISLGAVLLLAAVGLAITFGVMGVINMAHGEMIMLGAYTTFVIQQWMPNHIEYSLFVAIPA 333 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + G+ + +L L I + + + T Sbjct: 334 AFLVSGLAGVLIERGVIRFLYGRPLETLLATFGISLCLQQLVR------TIFGSLNQSVT 387 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + Y+++ + ++ LR+T + N+ S Sbjct: 388 TPNWMSGSIEINGALSLTYNRLYIIIFSILVLLALAALLRKTQFGLQMPAVTQNRPMASS 447 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + S G+AG + + + I +V+ GG+ +L Sbjct: 448 MGIRTGWLDAMTFGLGSGIAGIAGVALSQLTNV--GPNLGQAYIIDSFMVVVFGGVGNLM 505 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L +L L+++ + L I + L Sbjct: 506 GTFVGAMSLGVANKLLEPFAGAVLAK-------------ILVLVFIILFIQKYPRGMFAL 552 Query: 343 RTPSNF 348 + + Sbjct: 553 KGRAVE 558 >gi|154244841|ref|YP_001415799.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154158926|gb|ABS66142.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 320 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 137/322 (42%), Gaps = 30/322 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L + + + + + I+ + A GL+I++G G +SL IGAY Sbjct: 18 LIVLAALMVLVPVLAPSSFHLRVAALVWIFALAALGLTILMGYAGQVSLGHAGFVGIGAY 77 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + I +R GL L + + A+++G +G P LK +G YLAIATL I +L Sbjct: 78 AVAIGPARLGLDPLLCLVLGAVLAGMIAYGVGRPILKLKGYYLAIATLGFGVIVALVLHS 137 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 IT G G+ V+ F V + Y+V G + A + L Sbjct: 138 EAEITGGPDGMAVSRLSLFGWR---------------VSGALNWYWVTSGALLIGALLAL 182 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + A R + D++ A + KL+AF V++ + +AG AA I+P+ Sbjct: 183 NIAASPTGRALRALHDSEVAAAGAGIDVGAKKLAAFVVAAVYGAVAGGLLAAMNGLITPE 242 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 FS +I ++++VI+GG+ S+ A L+ + ++ + Y Sbjct: 243 AASFSHSIELVAMVIIGGLGSVFGTVVGAAFLVVLPQMLTALQEY--------------- 287 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 ++ + + + ++ ++ Sbjct: 288 EQAVLGLLIMVFMIFLPQGIVP 309 >gi|300783305|ref|YP_003763596.1| branched-chain amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299792819|gb|ADJ43194.1| permease component of ABC-type branched-chain amino acid transport system [Amycolatopsis mediterranei U32] Length = 356 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 127/338 (37%), Gaps = 19/338 (5%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 R +L L + L + ++ + I Y++ GL+++ G G Sbjct: 15 PKRRRTPPPLLVHALAALGALAVIVLLTLVTDEFTNLRIATIGYYLIAVAGLTLLTGLTG 74 Query: 65 LLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +SL IGAY+ +L R +W + +++ G G++ G + + RG YLA Sbjct: 75 QVSLGHGAFMFIGAYTVALLVRRVPTFPLWADLLLASAAGGLAGLLAGAAAARLRGPYLA 134 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 ATL ++ + K+ G G S R + V + Sbjct: 135 GATLALAVGLPALTRKFPDFLGGSNG--------------LSFTVHSRRAGAGVPELRWQ 180 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 +++ L+ +++ + R + +R +RD++ A + K+ AF VS+ G Sbjct: 181 TWIVWLSVLLALVLVVNIVRGRLGRNFRAVRDDEVAAALSGIAVGRTKILAFLVSAVCGG 240 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 +AG A +P F + ++ +++ V+LGG+ SL L+ + Sbjct: 241 LAGGLQAFLLGTAAPGSFTPALSLSLLAAVVLGGLGSLWGALWGAVALVYFQAWSEDLAD 300 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + N + + L +V+L + Sbjct: 301 ALHLN----TDVANNLPLAVYGVILIVVVLAFPRGIQG 334 >gi|293602476|ref|ZP_06684922.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292819238|gb|EFF78273.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 365 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 31/333 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + LA+ L + + A Y + + + + GL++++G G +S Sbjct: 4 RLASRWLPLALYALLAVAALVLAATVNGYYVFVLGNVALLALAGIGLNVLLGLTGQMSFG 63 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 YAIGAY+ IL + G S WL P +A+++GA G+++ LP+L+ +G YLA+ T+ Sbjct: 64 HAGFYAIGAYTVAILTGQAGWSFWLAWPAAAVVAGAFGLLLALPALRVKGPYLAMITIAF 123 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 I ++ LI+ +T G+ G+ + + + + + + + Sbjct: 124 GFIVEHALIEGGDVTGGQNGLMGIVQPS----------------LAGIGGDRGVAMLAIV 167 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 F++ + L R A R ++D++ A S+ + K AF VS+A +G+AG + Sbjct: 168 AVFVALAAYALLSRGTWGAAMRAVKDSETASESIGINPLMVKTVAFMVSAAVVGLAGGLY 227 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A I+P F F ++I+ + V LGG SL+ ++ + EL + Y Sbjct: 228 APQAGMITPHNFNFMQSILFVLAVTLGGAGSLAGPLLGAVVVGLLPELLSSLEEY----- 282 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L +V+ + L Sbjct: 283 ----------RLLFFGAFLLVVLWAAPDGVAGL 305 >gi|167031679|ref|YP_001666910.1| inner-membrane translocator [Pseudomonas putida GB-1] gi|166858167|gb|ABY96574.1| inner-membrane translocator [Pseudomonas putida GB-1] Length = 339 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 112/301 (37%), Gaps = 24/301 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ +ILI+ + A ++++G GLLS I + +GAY +L ++ + +A Sbjct: 36 TLATEILIFALAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHLHWGMFAALLGAA 95 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + +++G +++ G Y + TL S++ + T G G+ R Sbjct: 96 VFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRP---- 151 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 I + Y + G+ L + L + R+ + IR+N+ Sbjct: 152 -----NIEIAGHVLVDLADPRHFYVFVAGLFLLIFAAALRVIRSPFGSTLLAIRENETRA 206 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ K+ F +S A G+AGA +A + ++ + I+GG S Sbjct: 207 AAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGS 266 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L ++ + ++ + + L+ + L LV++ L Sbjct: 267 LFGSLLGAGAIVLLGDVLSELWPRW---------------LMLLGVILILVVVFMRGGLW 311 Query: 341 R 341 Sbjct: 312 G 312 >gi|121535363|ref|ZP_01667175.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1] gi|121306055|gb|EAX46985.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1] Length = 325 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 75/350 (21%), Positives = 138/350 (39%), Gaps = 42/350 (12%) Query: 1 MSIFSLRLNKYDKILCLLA-VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIV 59 M+I + + ++ L A + + + + I I I ++ A L+++ Sbjct: 1 MTILGMNAKRKTDLVSLAACLGLYAAVQAMIEFDIIGSFWLLNIILICINIILAVSLNLI 60 Query: 60 VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G G S+ A+GAY +L ++ + L I A+ +G G ++GLP+L+ G Sbjct: 61 NGFTGQFSIGHAGFMAVGAYLSAVLTVKFQVPFILAILAGAVAAGVLGFVIGLPTLRLSG 120 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAIATL + EI + ++ + G +G R Sbjct: 121 DYLAIATLGLGEIIRITILNIPYV-GGASGFMGIPRYTSFT------------------- 160 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + + +I L ++ A +IR+N+ A ++ K+ AF + + Sbjct: 161 ------WVFWAMVFTVFVIKNLINSSHGRACISIRENEIAAEAMGVDTTRYKVLAFTIGA 214 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 AF G+AGA F+ P F F ++ ++++V+LGG+ SL+ A +L V Sbjct: 215 AFAGIAGALFSHYFYIAHPASFTFMKSFDILTMVVLGGLGSLTGSITAAILLTFVSAALA 274 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 G + + L ++L R L + S + Sbjct: 275 GY---------------PEWRMVIYSLLLIALMLYRPQGLFGNKELSLKV 309 >gi|238019546|ref|ZP_04599972.1| hypothetical protein VEIDISOL_01415 [Veillonella dispar ATCC 17748] gi|237864245|gb|EEP65535.1| hypothetical protein VEIDISOL_01415 [Veillonella dispar ATCC 17748] Length = 337 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 121/309 (39%), Gaps = 19/309 (6%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + + +I + + + G LSL ++GAY IL + L I Sbjct: 3 LLNPYYLQIVMFFIINAIMGISIYFTLA-SGQLSLGAAGFMSVGAYVGAILSLKADLPIV 61 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151 + I + +++ +I+GLP+ + RG YLAIATL E+ + I + G +GI Sbjct: 62 VGIIIGGLVASLVAVIIGLPTTRLRGLYLAIATLGFGEVVRVIFLNLDITNGALGLSGIP 121 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + + + +LL + L + + + + + A+ Sbjct: 122 SIPQELTNLAYELDIDGLMGID-AVAWGNLMAIIILLAILVLIIAFCVRINNSRVGRAFA 180 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 I+ + A + +++ K+ AF + + G+ G +A + I+P F + + + ++ Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 + GG + + IL + E+ ++ Y + L ++ Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285 Query: 332 ILMRSHSLL 340 + +R +L Sbjct: 286 MAVRPDGIL 294 >gi|297559026|ref|YP_003678000.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843474|gb|ADH65494.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 375 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 110/318 (34%), Gaps = 13/318 (4%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 + + + + L++ A ++ G +GLLS + +A GAY+ +L Sbjct: 54 IPVLFEGALNSPPTLHLLAFCLVFGGLATSYDLLYGRVGLLSFGHALYFACGAYTAALLM 113 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 L + PV+ + +++G SL+ G LA+ TL ++ ++ + Sbjct: 114 RVVELPLLWAAPVAVVGGTLLSLLLGAVSLRVNGIALAMVTLAFAQAGSILVSR------ 167 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 RL + V + +Y+ + + ++ WL + Sbjct: 168 ------DPGRLTGGEEGLSLDTDRVPGAFVGVANTVNLYWAAVAFAAFAVGVVWWLTSSP 221 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + WR IR N++ L KL+AF V + G + ++P + Sbjct: 222 VGRVWRGIRANEQRVAVLGVNPYPYKLAAFTVGGGLASLGGVAYLLVTGGVTPGITTAEF 281 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH-TTLM 324 + ++ +V LGG + A+ + + L + + ++ Sbjct: 282 TLTLLVMVALGGAGTRWGPLLGAALYTYADHRLLQLGGSEAFAALPAWIAAPLSQPLFIL 341 Query: 325 VIALFLVILMRSHSLLRL 342 L++ L+ L Sbjct: 342 GTLFVLMVFFFPGGLVAL 359 >gi|33600534|ref|NP_888094.1| amino acid ABC transporter [Bordetella bronchiseptica RB50] gi|33568133|emb|CAE32046.1| Putative amino acid ABC transport system, membrane protein [Bordetella bronchiseptica RB50] Length = 334 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 115/311 (36%), Gaps = 24/311 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 Y + I +++ + A L+++ G GLLS + + IG Y+ +L Sbjct: 33 PFAGLGGYALKVAIMAIVFAVLATSLNLIYGFTGLLSFAQIAFWGIGGYTAALLAVDAHW 92 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S WL + ++ A +++G SL+ AI TL + + Q + W +T G GI Sbjct: 93 SPWLGVLAGGAVAVAASLVIGYASLRLSRHSFAIVTLSLVLLMQLVAKDWVDLTRGPLGI 152 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L + + Y+++L L+ + + L + I Sbjct: 153 PNLPTLE---------LALPGLGQLSSANPVVFYFIMLAFAVLALAGVHRLVGSRIGRTL 203 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 I+ N+ S + KL AFAVS+ GM G F + P +F F +++ Sbjct: 204 LAIKQNEPLTQSQGVATLRYKLLAFAVSALVAGMTGGLFVFYLSVVDPSIFDFYYTQMIL 263 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +VI+GG S + A+A+ + EL L+ L Sbjct: 264 IMVIIGGTGSFWGVIAASAVFTIIPELLR---------------VSPDLRLVLLGCVLVA 308 Query: 331 VILMRSHSLLR 341 IL + Sbjct: 309 AILALPQGIAG 319 >gi|163746701|ref|ZP_02154058.1| branched-chain amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] gi|161379815|gb|EDQ04227.1| branched-chain amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] Length = 401 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 122/348 (35%), Gaps = 25/348 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A + + + +I+ +FA G +I+ G G LS +G Sbjct: 21 FAPFLLNPFPANSALAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGVG 80 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +YS V + ++ + ++ +++G ++G SL+ G Y +I TL +++ N+ Sbjct: 81 SYSAVWMFKLLSYNVVPALVLAVIMAGLFSALIGFISLRRSGIYFSILTLAFAQMSFNLA 140 Query: 138 IK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP-----------SSFVIYEIFMYY 185 PITNG+ G+ + + +V + F + YY Sbjct: 141 YSVLTPITNGETGLQIYNSDPQYLQSVDAPSFPNLFGAAMNSSTTLFFGGWTFTFSVGYY 200 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 L+ + + + R+ R ++ NQ+ L+AF +S + G+A Sbjct: 201 FCAIFLILAFYLAIRIFRSPFGMMLRAVKSNQQRMNYTGLNTRPYTLAAFVISGMYAGLA 260 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G AA + +++ + V+ + ILGG +L + + +N Sbjct: 261 GGLLAAMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYFENIFAKINDNV 320 Query: 306 FNSLLKFDCSFNMRHTTLM-------------VIALFLVILMRSHSLL 340 + F + + LV++ L+ Sbjct: 321 LHGWFAFMPDGIEDAMVAIIHPFVGKGWHLTLGLLFMLVVIFLPGGLV 368 >gi|144898571|emb|CAM75435.1| inner-membrane translocator [Magnetospirillum gryphiswaldense MSR-1] Length = 357 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 140/326 (42%), Gaps = 19/326 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A +LFL + Y S+ IQI + A GL+I+VG G +SL + GA Sbjct: 30 AWAVLSVLFLIAAPSFLNNYHLSILIQIGFMGIAALGLNILVGYTGQISLGHAGFFGFGA 89 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 ++ L + +G+ + L +P++A+++ G++ G+P+ + +G YLAIAT I ++ Sbjct: 90 FASAWLNNSFGVPVVLAMPLAAVMTTVLGLLFGIPAGRLKGLYLAIATFASQFILEDFFA 149 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + G +G A F + + +YV+L + I Sbjct: 150 RADWFSGGSSGAAAAPVNLFGYE---------------LSGDKGFFYVVLFWVVVMFLIG 194 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT A+ +RD+ + + + ++ +F +SS + G+ GA + +S Sbjct: 195 SNLLRTRDGRAFIAVRDHYLSAEVMGINLTKYRILSFGLSSFYAGLGGALYGHYLGFVSA 254 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG----MNFYYFNSLLKFDC 314 + F +I + ++I+GG+ S++ T ++ + E+ G + + Sbjct: 255 EGFTILMSIEFLGMIIIGGLGSVAGTLMGTTFMVLLPEVMEGGVSIAKSLIGGDVSWLNE 314 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLL 340 + +A+ L ++ L+ Sbjct: 315 GLAYIKQASIGLAIILFLIFEPDGLI 340 >gi|320011059|gb|ADW05909.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331] Length = 362 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 109/322 (33%), Gaps = 15/322 (4%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L L + L++ A G +++G GLLS + +A G+Y+ Sbjct: 42 ALPLPGLLDGPVGSPGSLQLLATCLLFGALATGYDLLLGRTGLLSFGHALYFAAGSYATN 101 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WK 141 + GL + A +++G SL+ G ++ TL ++ ++ + Sbjct: 102 MFLLEAGLPFAAAAVLGVCFGAALALVLGSVSLRVTGIGFSMVTLAFAQAGSILVSRDPG 161 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 T G+ G L + + +Y++ L L+ +++ Sbjct: 162 GFTGGEEGRAAPAELLPSW-------------LVGIDHTANLYWIALAYLVLTLAVVHRA 208 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ W I++N++ L KL+AF ++ A + G +P Sbjct: 209 VRSPTGRVWEGIKENERRVEVLGLKPYGFKLTAFVLAGALAAVGGLVHLLLTGGSTPQTT 268 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH- 320 + ++ +V+LGG + + + + L + Sbjct: 269 TSDFTLSLLVMVVLGGTGTRWGPMVGGILYTWADHRLGDLAGSGAVADLPAVLRVPLSQP 328 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 L+ + V+ + L RL Sbjct: 329 LFLLGVLFVAVVHLLPGGLARL 350 >gi|317125499|ref|YP_004099611.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Intrasporangium calvum DSM 43043] gi|315589587|gb|ADU48884.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Intrasporangium calvum DSM 43043] Length = 340 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 119/303 (39%), Gaps = 27/303 (8%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + + IL + +FA + +++G GLLS + AY+ ++ + G+ L + A+ Sbjct: 49 VAMDILCWGLFAISIDLLLGFTGLLSFGHAAFWGGSAYATGVIAIKTGVPFPLAVLGGAV 108 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + + +G S++ G Y A+ TL +++ I+ +W+ +T G+ G+ + +F Sbjct: 109 FAMVIAVPIGYLSVRRTGIYFAMVTLAFAQMLFFIVNQWRSLTGGENGLQNIPKNFFGVE 168 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 V + + YY G+ + I + + IRDN Sbjct: 169 AVETD-------------SFYFYYAGAGVILVGILIAWRVVNSPFGRVLTAIRDNPARAR 215 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 +L + K+ AF +S+ G+AG F+ S S ++ + V+ I +LGG+ +L Sbjct: 216 ALGYDVERYKIVAFVISAGLAGLAGGVFSISHSFASLQEVGWTTSGKVVLITVLGGIGTL 275 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ + + + L++L+ H + Sbjct: 276 WGGLVGAGVVVYLEDYLASAGISGIA--------------MITGAIFVLIVLLFRHGIWG 321 Query: 342 LRT 344 Sbjct: 322 TAR 324 >gi|254467220|ref|ZP_05080631.1| ABC transporter, permease protein [Rhodobacterales bacterium Y4I] gi|206688128|gb|EDZ48610.1| ABC transporter, permease protein [Rhodobacterales bacterium Y4I] Length = 326 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 109/322 (33%), Gaps = 22/322 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + L L + + + I V+ ++ G SL V+ +G Sbjct: 4 FLIWIAALAALVALPHGLSFSQQEILVFLTINVLLVASYRLLT-LTGEWSLAHVVIMGVG 62 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS +L + G+ + + + + +I+ +++ P + +G Y I + EI + + Sbjct: 63 AYSSALLTKKLGVYVPVSMLLGGVIAALIAVLLSFPLFRMKGFYFLIGSFAAGEIIRLLW 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +++ G GI D + F YY + I Sbjct: 123 KRFRDPFGGAKGIKGIDPMPDFSIGFYKFDFFE---------PTSYYYFAGVIVAFCLWI 173 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + ++ + + + K + + + AFA++S F G++GA A I+ Sbjct: 174 LWRIEKSPVGLTFHAVHWQDKLAQASGVNVRAYRTLAFAIASGFAGISGALLAHYVGTIN 233 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + V++ I+GG + +L + E+ + Sbjct: 234 PTAFDIDLMVFVLTWAIVGGTATFYGPILGCVVLTVLNEIVLR------------ELGLE 281 Query: 318 MRHTTLMVIALFLVILMRSHSL 339 + + L IL L Sbjct: 282 QMRPLVYGAIMILSILFLPSGL 303 >gi|300310683|ref|YP_003774775.1| amino acid ABC transporter composite ATP-binding protein/permease [Herbaspirillum seropedicae SmR1] gi|300073468|gb|ADJ62867.1| ABC-type amino acid transport system, composite ATP-binding/permease components protein [Herbaspirillum seropedicae SmR1] Length = 627 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 111/332 (33%), Gaps = 31/332 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + ++ L L + ++ I + + GL ++ G GL S +GA Sbjct: 12 VALGLFIVLLALAPLVLPPFYMTLLNNIGLASLVVLGLVLLTGVAGLTSFGQAAFVGLGA 71 Query: 79 YSYV---------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 Y + S W + V+ +++ +G +LK G YL + T+ Sbjct: 72 YFSAALSAKVLPLPEALLWLQSPWPALAVALVLTALLAFAVGSVTLKLSGHYLPLGTIAW 131 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 I + G+ G+ + FLG + S F ++ Sbjct: 132 GISLYFIFGTLES-MGGQTGMSGIPSIAFLGVVLDSDRAMFG--------------LIWV 176 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 L + + L + A R ++ ++ ++ F +++ ++G + Sbjct: 177 AVLLGVAALRNLLDSREGRAIRALKGGIVMAEAMGVNTARMRIVVFVIAAVLAALSGWLY 236 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + ++P F I + + +LGG + + +++++ + E G+ Sbjct: 237 VHMQRFVNPSPFGLGFGIDYLFMAVLGGASHVWGAVLGSSLIVVLKEWLQGLLPVVLGRS 296 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F T + + + +++ + Sbjct: 297 GNF-------ETIVFGLLIVVLLQRSREGIWP 321 >gi|254562672|ref|YP_003069767.1| branched-chain amino acid transport system permease [Methylobacterium extorquens DM4] gi|254269950|emb|CAX25928.1| putative branched-chain amino acid transport system permease protein [Methylobacterium extorquens DM4] Length = 347 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 127/315 (40%), Gaps = 16/315 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88 + T + + +++ I LI + GL++ +G G SL A+GAY+ +L Sbjct: 38 IPLTATDYWYNAILIPFLIMALAGLGLNLTMGYAGQASLGTGAFMAVGAYATYNLLLRLP 97 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L + + + +I+GA G+++GLPSL+ +G YL TL + + + + +N + Sbjct: 98 ELPLPVSLAGGGLIAGAVGLVVGLPSLRIKGFYLIAPTLAAQFLIEWVFNQVGWFSNYAS 157 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 ++ + Y + L + + L + Sbjct: 158 SSAISAPRLVFLGY-------------DLSSPAGRYALTLTSVTVVTVLAWRLVGSQTGR 204 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENI 267 WR +RD + A + + AKLSAF V +A G+AGA +A A + F + Sbjct: 205 NWRAVRDGETAAAVIGVPVARAKLSAFFVGAAVSGVAGALWAFAYLGTVDARSFDLDRSF 264 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + I+I+GG++SLS A ++ L ++ + L + L Sbjct: 265 QAMFIIIIGGLSSLSGSFIGAAFIVLTPILLTHLSNAFLGGSLD-GGQLSNLQRILFGAL 323 Query: 328 LFLVILMRSHSLLRL 342 + ++ + L L Sbjct: 324 IIGFLIKEPNGLAAL 338 >gi|119719514|ref|YP_920009.1| inner-membrane translocator [Thermofilum pendens Hrk 5] gi|119524634|gb|ABL78006.1| inner-membrane translocator [Thermofilum pendens Hrk 5] Length = 349 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 129/341 (37%), Gaps = 55/341 (16%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR---------- 87 ++ +G+ +YV+ A L++ G LGL + +A+GA+S L R Sbjct: 6 FLVDLGVLYSVYVILASSLNLEYGELGLPNFAKSAFFAVGAFSVGALSVRLGTLLLGITM 65 Query: 88 -------------------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 + + + ++ ++ G++ P+L+ R DYL Sbjct: 66 EGEFKLKSVYYATLVSQALVNSPQLGVILFVVPLMIAVPLAALLGVLASYPALRLREDYL 125 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 + + SEI + + ++P+ G G V D L ++ ++ ++ Sbjct: 126 GMLLIAFSEIIRVVARNYEPLVGGTYGAGVVDFLAWIPPPLK---------------QVV 170 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 + + + F L R+ R IRDN+ A L + +++ A+ S Sbjct: 171 LLALSSSIAFAIWLAYYRLSRSPFGRVLRAIRDNELAASVLGRDVAKMRMTVMALGSGMA 230 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 +AG +A ++PD F S+ +V +VI+GG + A I V + Sbjct: 231 AVAGVLYAFYVGSVNPDDFTISKTFLVALMVIIGGRGNPYGALVGPATYIAVDRSIQFVK 290 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 Y L N ++ +AL L+++ + + + Sbjct: 291 QY-----LALPFDPNYASYVILGVALILIVMKKPEGIAPEK 326 >gi|259415846|ref|ZP_05739766.1| inner-membrane translocator [Silicibacter sp. TrichCH4B] gi|259347285|gb|EEW59062.1| inner-membrane translocator [Silicibacter sp. TrichCH4B] Length = 327 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 113/328 (34%), Gaps = 15/328 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L A++ L+ + + ++ + +I + A GL+I +G GL+SL + + Sbjct: 6 LFNAALLLGLIAVPAWAVMTDEPFTITLATRAVILALAAAGLNIALGIGGLVSLGHAVFF 65 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y+ IL L+ + ++ L ++ + ++ Sbjct: 66 GIGGYAMGILAHHAQSYTPLMEWPFLIEGTKFMPVIWLLAIVVSALAALVIGILSLRTTG 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + G S+ FP + I Y + L + + Sbjct: 126 AYFIMITLAFGQMFYYFAISWSTYGGEDGMSIYVRNDFPGLNTLAPIQFYGLCLAILVVV 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 LRR+ A R ++ + KL AF +S G+AGA FA Sbjct: 186 LVFSARLRRSPFGLALNAARQVPARVEAVGMDPMRLKLVAFVISGVITGLAGALFADLNR 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP MF + + ++ +VILGG+ L + + G+ ++ Sbjct: 246 FVSPTMFSWQFSGEIMILVILGGVGRLFGPVAGAVTFVALEHFLGGITEFWH-------- 297 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L V+L + L Sbjct: 298 -------IFLGLILLAVVLFARGGITGL 318 >gi|329116317|ref|ZP_08245034.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326906722|gb|EGE53636.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 317 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 71/334 (21%), Positives = 136/334 (40%), Gaps = 42/334 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +L V L+L +G Y + + I I ++ A G ++V+G G L Sbjct: 11 WAVLVTVIFLVLSFLIGQGILGPYYVQILMGIGISIIMAMGTNLVLGFSGQFPLGQAGFM 70 Query: 75 AIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 AIGAY+ I+ ++ + V +++G +I+G P+L+ +GDYLAIATL ++EI Sbjct: 71 AIGAYTTAIITQNIPTYLGFYVSMLVGILVAGLVAVIVGFPTLRLKGDYLAIATLGVAEI 130 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + ++ +TNG AG+ R V+ Sbjct: 131 IRIAIVNGGEVTNGAAGLTGILRYTSWP-------------------------VVFAFVV 165 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + + +++I ++R+++ A S+ K++ FA ++ +AG+ + Sbjct: 166 LIIVLTMNFLQSSIGRQVISVREDEIAAESMGVNTTKIKVATFAFAAMTASVAGSLYVGY 225 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + P F +I + I +LGG+ S++ A +L G+ + Sbjct: 226 IGTVVPKDFTIMRSIDYLIIAVLGGLGSMTGTILAAIVLGGLNMYLQSFSE--------- 276 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + +AL LV++ + LL + Sbjct: 277 ------VRMIVYSLALILVMVFKPGGLLGTKEFQ 304 >gi|241666567|ref|YP_002984651.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862024|gb|ACS59689.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 585 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 97/320 (30%), Gaps = 29/320 (9%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + G ++ ++ + +IY M A + ++ G G+L+ + +GAY+ ++ + Sbjct: 23 IVFGPMFLGRFSLNVLTRSMIYAMLAVTVDLLWGYTGVLTFGQAAFFGVGAYATAMVLTH 82 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 G S L + ++ + + I++ + G Sbjct: 83 IGASPALFVVALVAAVLVPLVLGLAVGWLSFYHGSTPLYATVISLVVPIVVTQLVFSGGT 142 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 + + + + F +S ++ A + + R+ Sbjct: 143 WTGSSSGLVGYETLPLGLPGYFRLSGASLLVL---------------AVLAIVFVRSDAG 187 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 IRDN+ L K+ V + G+AG FA + ++P+ F Sbjct: 188 RLLVAIRDNEARVAYLGMNPARLKIVLTGVLAGVCGLAGFLFANASGVVAPENTGFVFGT 247 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ LGG ++ + + G ++ Sbjct: 248 ELVVWTALGGRGTIIGPLFGAIGIDYLSASLSG--------------DLPFLWQLIIGAL 293 Query: 328 LFLVILMRSHSLLRLRTPSN 347 +I++ L L T Sbjct: 294 FVAMIILLPGGLASLVTRFL 313 >gi|148252320|ref|YP_001236905.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146404493|gb|ABQ32999.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 315 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 120/315 (38%), Gaps = 29/315 (9%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 +I ++ +I+I + A L++++G G++S IG Y+ IL Sbjct: 23 PVYSNLTGNIFILTLFTRIVILALAAVSLNLIMGYGGMMSFGHAAYLGIGGYAVGILAQE 82 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 S W V+ +S +++G SL+ RG Y + TL +++ + Sbjct: 83 GIGSGWAQFAVAIAVSALYALVIGALSLRTRGVYFIMITLAFAQMAYYVASGLARYGG-- 140 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 + R + + YY+ L +I + + Sbjct: 141 ------------DDGLTVYKRSDFGGLINLGNRVQFYYLCLFCLLAVVVLIWRIVNSRFG 188 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 + +R N++ ++ KL+ F ++ G++GA A + D +SP + ++ + Sbjct: 189 LVLQGLRSNEQRMQAIGFPSKRYKLACFVIAGMLCGLSGALLANNTDFVSPAVMYWTRSG 248 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ +VILGGM +L + + + + E+ + Y+ +M Sbjct: 249 DLMVMVILGGMGTLMGPVVGSVVFLVLEEVLSQLTEYW---------------ALIMGPL 293 Query: 328 LFLVILMRSHSLLRL 342 L L++L ++ + Sbjct: 294 LLLIVLFGRGGIMGM 308 >gi|299541879|ref|ZP_07052202.1| high-affinity branched-chain amino acid transport system permease protein [Lysinibacillus fusiformis ZC1] gi|298725617|gb|EFI66258.1| high-affinity branched-chain amino acid transport system permease protein [Lysinibacillus fusiformis ZC1] Length = 311 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 139/345 (40%), Gaps = 42/345 (12%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ +K ++A+V ++ L + Y +M I + I +M A L IV+G G Sbjct: 1 MKKSKVFWGYAVIALVIYAVVQLLITTEVIDLYYKNMLITMCINIMLAVSLHIVIGVTGQ 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 S+ A+GAY I+ ++ L L I + A + G+I+G+P+L+ +GDYLAIA Sbjct: 61 FSIGHAGFLAVGAYVSAIITTKLMLPFPLAILLGATAAAVAGLIVGIPTLRLKGDYLAIA 120 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL +EI + I + + + + Sbjct: 121 TLGFAEIIRIIFLNTDYVGGAAGMQVKY---------------------------LSNWT 153 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 L+ +I + A +IR+++ A ++ + K+ AFA+ S F G+A Sbjct: 154 YAFFGVVLTILVISNFTNSRHGRACISIREDEIAADAMGINTTYYKVVAFAIGSFFAGLA 213 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA FA + I P F F ++ ++ V+LGG+ SLS A L V Sbjct: 214 GAIFAHNFYIIQPTTFGFLKSFDILIYVVLGGLGSLSGSVIAAIFLTVVSTYLANF---- 269 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L +V+L R L+ + + + Sbjct: 270 -----------PETRMIIYSLVLIIVMLYRPTGLMGTKEITQLFK 303 >gi|83944047|ref|ZP_00956504.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] gi|83845294|gb|EAP83174.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] Length = 644 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 100/311 (32%), Gaps = 26/311 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ I + + Sbjct: 355 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFVPDYTLSIIIAL 414 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ ++ A G++M + + + TL+ + L + G + Sbjct: 415 PLAFAVTFAAGVVMERLVI-RHLYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSPA 473 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + S + + + I+ L+RT + R + N Sbjct: 474 ---------WLDGAWVISDVIQISYIRIAIFVLALLFLGLILFVLKRTRLGLEVRAVTQN 524 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 S+ + F + S G+AG S + + +V Sbjct: 525 PGMAASMGINPDRINMMTFGLGSGIAGIAGVAIGLYAKVTSEMGADYIVQSFMTVVVGG- 583 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 + ++ +++ + + F+ S + T MV+ + L I R Sbjct: 584 -VGNVWGTLAGASLIGFLQ-----------KGIEWFNPSNTLAAQTYMVLFIILFIQFRP 631 Query: 337 HSLLRLRTPSN 347 ++ + + Sbjct: 632 KGIVAQKGRAA 642 >gi|288962131|ref|YP_003452426.1| inner-membrane translocator [Azospirillum sp. B510] gi|288914397|dbj|BAI75882.1| inner-membrane translocator [Azospirillum sp. B510] Length = 342 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 116/326 (35%), Gaps = 26/326 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + PL+ L A ++ +I +F L +V+G G+ +L + GAY Sbjct: 31 IGVPLIAAAGLAAYWLLPEDLALLTRIAASALFVLSLDLVLGYGGIATLGQAAMFGTGAY 90 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + I + + L+ V + G + G L RG L + T+ + +I Q + K Sbjct: 91 AAGIAAVNWIDDPFALLAVGGLAGGLIALATGALILHARGLTLLMLTIAVGQIVQEVANK 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + T G G+ D G F ++ Y L + + Sbjct: 151 ARDWTGGSDGLSGIDPAPVFGL------------FRFDMFGHTAYLFALAVLVAGLVVAR 198 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + R+ A R + ++ ++ + ++ + V+ F G+AGA A + + D Sbjct: 199 RIVRSPFGLACRGVGEDPLRISAIGGSPKAYLVALYGVAGVFAGVAGALTAVTSGIVGLD 258 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 FS + + +++LGG L T +GV + + Y++ Sbjct: 259 SAGFSWSAEALVMLVLGGTGRLYGAVIGTVAFMGVHHVLAANDPYHW------------- 305 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTP 345 + + L ++L + Sbjct: 306 -MAFIGLFLIGIVLFLPGGIASGVER 330 >gi|91975526|ref|YP_568185.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91681982|gb|ABE38284.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 352 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 117/337 (34%), Gaps = 32/337 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + L + +L L Q Y+ G ++LI +FA +V G G++S Sbjct: 17 RKRRRRVLPIIELVVLAIGLLLPLVLQDYLTVFGTRVLILCLFALSFDLVWGYSGIMSFG 76 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + + Y +L G++ L++ + ++ G ++ L + ++ + + Sbjct: 77 QAVFFGSAGYGVALLARDLGVTSMLVVIPAGVLIGFSIALLIGGFLLLGRNPSSVIFVAL 136 Query: 130 SE----IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + L + G+ GI ++ + YY Sbjct: 137 GTLTGSYAFDRLARGWYYLGGQNGIPSIPPMHIGSYDLTE--------------GPVFYY 182 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +L + L +L R+ A +R+N++ + K F++ A G+A Sbjct: 183 FVLAILLLVYLACRFLVRSQFGLALAGLRENEQRIAFFGYKVQHIKAIIFSLGGAIAGLA 242 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G+ +A + P+M + V+ V+ GG +L ++ V Sbjct: 243 GSLYAFHEGFVWPNMLGVVMSTQVVLYVLFGGSGTLIGAVIGAVVIEIVSFWLSN----- 297 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 S+ ++ + LVIL R L+ L Sbjct: 298 ---------SYQEIWPIILGALMLLVILFRPAGLISL 325 >gi|295099270|emb|CBK88359.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Eubacterium cylindroides T2-87] Length = 293 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 105/303 (34%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GA++ + + L+ ++ + + Sbjct: 8 MINGLSLGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAFTAFYATTFFHLNFFVALII 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G G+++ + K I LI + +L G Sbjct: 68 AMLLCGVLGVVIERIAYKPLRHATRITALITAMGVSYVLEYTMQYFAGSD---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + T L+ F V + Y+ + L + + +T + A R + ++ Sbjct: 118 VKTFPTDLLENTAFSLGGVRITMMQIYIFVITIILMVLLTYIVNKTKMGRAMRAVSVDED 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + S G+AG + I+P M + + + GG+ Sbjct: 178 AAKLMGINVDTTISFTFFLGSCLAGVAGVLVGVYYNSINPLM-GMTPGLKAFIAAVFGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ + L + ++ + L LV++++ Sbjct: 237 GNIPGAMIGGLFIGIAETLVTAYGSSLYKDA-------------IVYVILILVLILKPDG 283 Query: 339 LLR 341 LL Sbjct: 284 LLG 286 >gi|218678798|ref|ZP_03526695.1| amino acid ABC transporter, permease protein [Rhizobium etli CIAT 894] Length = 172 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 2/160 (1%) Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+A + + LRR I AW +R+++ A SL + KL+AFA + F G AG+FFAA Sbjct: 1 MLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGFAGSFFAA 60 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + +SP+ F F E+ +V++IV+LGGM SL+ IA A +++G E M+ + + Sbjct: 61 RQGFVSPESFIFLESAVVLAIVVLGGMGSLTGIAVAAIVMVGGTEALREMD--FLKVVFG 118 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 D + + L +A+ +V+L + + R P+ FL+ Sbjct: 119 PDFTPELYRMLLFGLAMVVVMLFKPRGFVGSREPTAFLKE 158 >gi|220923853|ref|YP_002499155.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219948460|gb|ACL58852.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 295 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 71/305 (23%), Positives = 126/305 (41%), Gaps = 17/305 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 YI ++ I IYV+ A GL++ G G+ + V + IGAY+ +L + + Sbjct: 3 AYIIAILIISGIYVLLALGLNLQYGLTGITNFGHVGFFCIGAYTAALLSQVSVPWPFAFL 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +A+ +GL SLK R DY AI +L SE+ + ++ K +T G GI +L Sbjct: 63 AGAALA-ALTAWPLGLISLKLRDDYFAIVSLGFSEVVRIVVTSEKWLTKGVQGITGIPKL 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + F + + + + +L+ + L+ + R+ IRDN Sbjct: 122 F-------------AFLGTGITQAVAVLLLLVAVNVLAGLSKSRIVRSPFGRMIEAIRDN 168 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++A +L K+ + +A G+AG F+A I P+ F + +I+G Sbjct: 169 EEAVKALGKDPSKFKIQVLMLGAALAGIAGGFYAHYIGYIVPEQFVPLITFYIWMAIIIG 228 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +S T IL+ +E + + ++ +AL L L R Sbjct: 229 GVGPISGALVGTLILMFFLEGSRFLRGLI---PFVSEVEMASIRLGVIGLALVLFTLYRP 285 Query: 337 HSLLR 341 L+ Sbjct: 286 QGLMG 290 >gi|307944448|ref|ZP_07659788.1| inner-membrane translocator [Roseibium sp. TrichSKD4] gi|307772197|gb|EFO31418.1| inner-membrane translocator [Roseibium sp. TrichSKD4] Length = 358 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 76/328 (23%), Positives = 134/328 (40%), Gaps = 13/328 (3%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + V + F+ + T + ++ S+ I L++ + A GL+++ G G LSL + Sbjct: 27 IGMAVILAVAFIVVPLTANDFFLTSIMIPFLVFSLAAIGLNVLTGFCGQLSLGTGAFMGV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ + +++ L + +S S G I GLPSL+ +G YLA+ TL + Sbjct: 87 GAYAAYKLTTIFPDVNVVLFVLISGFFSAGIGAIFGLPSLRIKGLYLAVTTLAAQFFLEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I+ + N V F S + Y+V+LG+ A Sbjct: 147 CFIRIPWLYN---------DNASGAIEVPKREMFGVIVSGAEATPLARYFVVLGITVFIA 197 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 +I + R I +W IRD A + + KL AFAVSS G+AGA + Sbjct: 198 FLIANVLRGRIGRSWMMIRDMDIAAELMGIRPLQTKLMAFAVSSYICGVAGAMMVFFWLN 257 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 P + + + ++ +VILGG+ SLS A + + + + + Sbjct: 258 AAEPSSYSINLSFQILFMVILGGLGSLSGAFLGAAFIWILPVMLKFIPSAIGLEIGA--E 315 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ + +++ H RL Sbjct: 316 TVEHLTFMVVGGLIIFFLIVEPHGFARL 343 >gi|257093216|ref|YP_003166857.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045740|gb|ACV34928.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 358 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 74/345 (21%), Positives = 137/345 (39%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF + +++ V + F+ + + + ++ I LI + A G++I+VG Sbjct: 18 QIFPIAQDRW------AIVGLLVFAFIGIPLLVDEYLLRAILIPFLILSLAALGVNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G ++L A+GAY+ GL + L + + + + A G++ G+PSL+ RG Sbjct: 72 FCGQITLGAGAFMAVGAYAAYNFHIRIEGLPLLLSLLLGGLTAAAVGIVFGIPSLRVRGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL + ++ ++ + + + Sbjct: 132 YLAVATLAAQFFTDWVFLR-------------VPWFTDNASSGSVSVSNLQVLGWPIAAP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y LG + A + + R+AI W IRD A + +FAKLSAFAVSS Sbjct: 179 VDKYLFCLGWLTVFALLAKNMTRSAIGRQWMAIRDMDVAAEVIGIRPLFAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 F+G AGA + P F + ++ +VI+GG+ S+ A ++ + Sbjct: 239 FVGTAGALWGFIHLASWEPAAFSVDRSFQLLFMVIIGGLGSIMGSFFGAAFIVILPIALN 298 Query: 300 GMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + ++ H + RL Sbjct: 299 QFLPAIGGLFGITISTAGISHAELIIFGALIIFFLIKEPHGIARL 343 >gi|288574274|ref|ZP_06392631.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570015|gb|EFC91572.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] Length = 293 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 31/306 (10%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 YI ++ I I + A+GL+I+VG G +SL + IGAYS +L ++ GLS W + Sbjct: 2 SYIITVATFISIQAIVAYGLNIIVGYAGQISLGHAAFFGIGAYSAGLLATKAGLSFWAAL 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P+ I G+I GLPSL+ + D+LAI T+ ++ I +++ + Sbjct: 62 PLVVAICAVIGIICGLPSLRLKADFLAITTIGINFIVESLFLYV---------------- 105 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F G + + + L L + W R+ + A ++R+ Sbjct: 106 PFFGGALGLGGIPRVVFLGNKLKGGEFLTLCLLFLALVMFLSWWFSRSWMGLACISLREE 165 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A S+ + + KL AF + S G+ GA +A I+P F F +++++S+++LG Sbjct: 166 ETAASSMGVSPVKFKLVAFVLGSVIAGIGGALYAHQMRFIAPSDFGFPVSVMLLSLIVLG 225 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM + IL + EL + Y + + L +I + Sbjct: 226 GMGTFWGPLVGAIILGSLPELARPLMEY---------------RMLIYSLLLLGMIRFQP 270 Query: 337 HSLLRL 342 LL Sbjct: 271 QGLLGE 276 >gi|309779626|ref|ZP_07674385.1| branched-chain amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308921567|gb|EFP67205.1| branched-chain amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 347 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 130/328 (39%), Gaps = 16/328 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V L+ + + S ++D++ I L + A GL+++ G G LS+ A+GA+ Sbjct: 19 AVTLLVAYFVVPLVASDYWLDAILIPFLALSLAAVGLNLLTGYAGQLSVGSAAFMAVGAF 78 Query: 80 SYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + R + + I ++ + + A G+ GLPSL+ RG YLA++TL Q L Sbjct: 79 AAYNFNLRVEGLPLPVSIVLAGLAATAIGVAFGLPSLRLRGFYLAVSTLAAQFFVQWALT 138 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K+ +N A + Y L + + +++ Sbjct: 139 KYGWFSNNNASGVIDAPP-------------IVVAGFAFDTPALRYVFALTVVTILTALV 185 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRIS 257 L +T + + +RDN+ A ++ KL AFA+SS IG+AG + + Sbjct: 186 WRLVQTPTGHHFIAVRDNEMAARVTGVPVLRTKLLAFAISSFVIGVAGVLWGFVYLRTVE 245 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + ++ IVI+GG+ ++ A+++ L + F + Sbjct: 246 PAGFNLDRSFQILFIVIIGGLATIRGAFLGAALVVVFPLLLSRFGAFVFGGRFDSGV-LD 304 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345 + ++ + ++ L L Sbjct: 305 LSQRIVIGALIVAFLIAEPQGLAALWQR 332 >gi|115360061|ref|YP_777199.1| inner-membrane translocator [Burkholderia ambifaria AMMD] gi|115285349|gb|ABI90865.1| amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia ambifaria AMMD] Length = 603 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 33/324 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V ++ L + Y+ +Y + A L++V G++G +SL IGA Sbjct: 312 VLVVLIVAAAVLPWLGASSYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L S G S + IP + +I+ G ++ P+ + RG Y++IATL + E+ +++ Sbjct: 372 YASALLSSDLGWSAAVTIPCAGVITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI L + Y+ + + A + Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------AATARAAYWFTFAVLIVFALVQ 473 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L R+ + R +R++ A + K AFAV G++G A I+ Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F +I+ +++VILGG+ ++ LIG+ EL Y Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIVGAIALIGLPELFRWAADY-------------- 579 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + L L++ R LL Sbjct: 580 -RMLIYGLVLLLLVRFRPQGLLGT 602 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R+GL + + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVVIGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +A + +LR T + A R + Sbjct: 126 PDWH-----------LRIAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280 Query: 337 HSLLR 341 + L Sbjct: 281 NGLFS 285 >gi|99082075|ref|YP_614229.1| inner-membrane translocator [Ruegeria sp. TM1040] gi|99038355|gb|ABF64967.1| inner-membrane translocator [Ruegeria sp. TM1040] Length = 327 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 112/325 (34%), Gaps = 15/325 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A++ L+ + + ++ + +I + A GL+I +G GL+SL + + IG Sbjct: 9 AALMLGLIAVPAWALMSDEPFTITLATRAVILALAAAGLNIALGIGGLVSLGHAVFFGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ IL L+ + ++ L ++ + ++ Sbjct: 69 GYAMGILAHHAQSYTPLMEWPFLIEGTKFMPVIWLLAVVVSALAALVIGILSLRTTGAYF 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + G S+ FP + I Y + L + + Sbjct: 129 IMITLAFGQMFYYFAISWTTYGGEDGMSIYVRNDFPGLNTLAPIQFYGLCLAILVVVLIF 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 LRR+ A R ++ + KL AF +S G+AGA FA +S Sbjct: 189 TARLRRSPFGLALNAARQVPARVEAVGMDPMRLKLVAFVISGVITGLAGALFADLNRFVS 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P MF + + ++ +VILGG+ L + + G+ ++ Sbjct: 249 PTMFSWQFSGEIMILVILGGVGRLFGPVAGAVTFVALEHFLGGITEFWH----------- 297 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + + L V+L + L Sbjct: 298 ----IFLGLILLAVVLFARGGITGL 318 >gi|251790326|ref|YP_003005047.1| urea ABC transporter permease protein UrtC [Dickeya zeae Ech1591] gi|247538947|gb|ACT07568.1| urea ABC transporter, permease protein UrtC [Dickeya zeae Ech1591] Length = 358 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 106/342 (30%), Gaps = 27/342 (7%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 IL L V+ L Y ++ +IL Y + A L +V G GLLSL + Sbjct: 24 ILAALVVLPFCALLPAENPLAISTYTLTLIGKILCYAVVAVALDLVWGYAGLLSLGHGLF 83 Query: 74 YAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +A+G Y+ + W +P + + L L L Sbjct: 84 FALGGYAMGMYLMRQAAGDGLPAFMSFLSWTELPWFWTGTQHFAWALCLIILVPGLLALL 143 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL---GTTVRSLIRFFRFPSSFVIYE 180 +++ AG+ + R FP S Sbjct: 144 FGYFAFRSRIKDVYFSIMTQALTYAGMLLFFRNETGLGGNNGFTGFTTLLGFPVSATATR 203 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 I ++ + + LS +WL R+ +RD + + KL + +S+ Sbjct: 204 IGLFIATVLLLALSLVSCMWLTRSKFGRVLTAVRDAENRLMFCGYDPMGFKLFVWTLSAV 263 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA + I+P + +I V LGG SL I+ G Sbjct: 264 LCGLAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGSLVGPILGAGIVNGAKSW--- 320 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F +F + + LV L ++ L Sbjct: 321 -----------FTVAFPDFWLFFLGLMFILVTLFLPRGVIGL 351 >gi|226355324|ref|YP_002785064.1| branched-chain amino acid ABC transporter permease [Deinococcus deserti VCD115] gi|226317314|gb|ACO45310.1| putative branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] Length = 318 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 111/265 (41%), Gaps = 15/265 (5%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + + IL + +FA ++ G GLLS + AY+ L S + + + Sbjct: 40 LALDILAWGLFAVAFDLLFGFSGLLSFGHAAFWGSSAYATAYLLSNGQSVP-VAMLGGTL 98 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 ++ + + S++ G Y ++ TL +++ + ++W +T G+ G+ R FLG Sbjct: 99 VALTLALPVAYLSVRSAGIYFSMITLAFAQMLSFLALQWTDVTGGENGLQGFARPSFLGL 158 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + YY L + + I R+ A + +RDN++ Sbjct: 159 DFSNSTT--------------RYYFCLAVFAVGFYIAYRTVRSPFGQAQQAVRDNEQRAQ 204 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 S+ + K +AF +S+ G+AG+ ++ +S ++ + + V+ + +LGG T+L Sbjct: 205 SIGYNPVRFKFTAFLISATLAGLAGSMYSFGHGVVSLEVVNWRTSGEVVMMTLLGGTTTL 264 Query: 282 SKIAKATAILIGVVELCCGMNFYYF 306 +++ + ++ N Sbjct: 265 FGPVIGAGLVLLLRDVLTTANLPVG 289 >gi|126738114|ref|ZP_01753835.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] gi|126720611|gb|EBA17316.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] Length = 356 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 119/336 (35%), Gaps = 9/336 (2%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + L+ +I I+++ +++G G++S + + Sbjct: 16 LALILGGILICLALAPFLFPGVRTVDTAARICIFIVLVASYDLLLGYGGIVSFAHTMFFG 75 Query: 76 IGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 IGAY + S G + A+ + A ++GL SL+ R + A+ TL ++ Sbjct: 76 IGAYGVALASSHMGRGFDAIAVGAVTGALAAAALAFVIGLFSLRVRAIFFAMITLAVASA 135 Query: 133 FQNILIKWKPITNGKAG-IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 ++ + +T G+ G + R R + ++ YY + Sbjct: 136 VAVLVSQLSGLTGGEDGLTFKTPRALGPAFKFGKEAFDGRLFGVKLNGKLLAYYFVFFGS 195 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 F ++L + + + IR+N S+ +++ +++A +S+A +AG+ +A Sbjct: 196 FCLFLLMLRVVNSPFGRVLQAIRENDFRAESIGYRVVYYRVAATCLSAAIAALAGSLYAI 255 Query: 252 SRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + PD I ++ +V++GGM +L + + + Sbjct: 256 WLRYVGPDTVLSMELMIDILLMVVIGGMGTLYGAVIGAVLFVMAQNYLQNLMGAAAELTS 315 Query: 311 KFDCSFNMR----HTTLMVIALFLVILMRSHSLLRL 342 + + + L + ++ Sbjct: 316 GLPVLPQLLNADRWLLWLGVLFILSVYFFPTGIVGR 351 >gi|118475595|ref|YP_891603.1| ABC transport system permease protein [Campylobacter fetus subsp. fetus 82-40] gi|118414821|gb|ABK83241.1| ABC transport system permease protein [Campylobacter fetus subsp. fetus 82-40] Length = 351 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 75/354 (21%), Positives = 133/354 (37%), Gaps = 37/354 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V + FLFL + +Y + I I+++ A +++ G G SL AIG Sbjct: 9 VLFVALAVGFLFLSNSYFSEYSLRIVNNIAIFIILAISYNLINGVTGQFSLEPNGFVAIG 68 Query: 78 AYSYV--------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 AY+ I+ + + + + VS + + +I+ +P + Sbjct: 69 AYAAALLLLNSDSKLYQFDVTEPSSIILAIHTTNFIFAMLVSGICATILALILAMPVFRV 128 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RGDYLAI TL I Q + + + TNG G+ R Sbjct: 129 RGDYLAIVTLGFGFIIQLLAVNFPAYTNGSLGLNEVLR----------------VDGDGN 172 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I + + ++ IL L + A + +RD++ A ++ K AF V Sbjct: 173 ISRYTNIFYSGSVAIIAVVAILNLIYSKFGRAMKAVRDDEDAATAMGINTFRVKTLAFCV 232 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+ F G+ GA +SPD F F ++ I++LGG+ S + T ++IG E Sbjct: 233 SAFFEGVGGALLVGLLGSVSPDQFTFMFTFQLLIIIVLGGLGSTTGAILGTILVIGGSEW 292 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ N +F + + L V+L ++ + Sbjct: 293 LRFLDEP-MNIFGYETPAFPGLRMVVFSVVLIFVMLFARRGIMGQMELGELFNK 345 >gi|238026428|ref|YP_002910659.1| branched-chain amino acid ABC transporter permease [Burkholderia glumae BGR1] gi|237875622|gb|ACR27955.1| Branched-chain amino acid ABC transporter, permease protein [Burkholderia glumae BGR1] Length = 537 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 81/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + +++ Sbjct: 263 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFQRYAPGAFDWYPLVAMPASFAAAALVGIV 322 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 ++ + + +L + + + + + + Sbjct: 323 LER--SVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVANPAWMSGGVTVMQNL 380 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + A L RT + R + N++ + AFA Sbjct: 381 ILPYNRIVILAFSLAVVAVAWGVLTRTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 440 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L V + Sbjct: 441 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVVGGFGLGLVSKA 498 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 499 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 536 >gi|33596765|ref|NP_884408.1| amino acid ABC transporter [Bordetella parapertussis 12822] gi|33573466|emb|CAE37452.1| Putative amino acid ABC transport system, membrane protein [Bordetella parapertussis] Length = 334 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 115/311 (36%), Gaps = 24/311 (7%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 Y + I +++ + A L+++ G GLLS + + IG Y+ +L Sbjct: 33 PFAGLGGYALKVAIMAIVFAVLATSLNLIYGFTGLLSFAQIAFWGIGGYTAALLAVDAHW 92 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S WL + ++ A +++G SL+ AI TL + + Q + W +T G GI Sbjct: 93 SPWLGVLAGGAVAVAASLVIGYASLRLSRHSFAIVTLSLVLLMQLVAKDWVDLTRGPLGI 152 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L + + Y+++L L+ + + L + I Sbjct: 153 PNLPTLE---------LALPGLGQLSSANPLVFYFIMLAFAVLALAGVHRLVGSRIGRTL 203 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 I+ N+ S + KL AFAVS+ GM G F + P +F F +++ Sbjct: 204 LAIKQNEPLTQSQGVATLRYKLLAFAVSALVAGMTGGLFVFYLSVVDPSIFDFYYTQMIL 263 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +VI+GG S + A+A+ + EL L+ L Sbjct: 264 IMVIIGGTGSFWGVIAASAVFTIIPELLR---------------VSPDLRLVLLGCVLVA 308 Query: 331 VILMRSHSLLR 341 IL + Sbjct: 309 AILALPQGIAG 319 >gi|256371322|ref|YP_003109146.1| inner-membrane translocator [Acidimicrobium ferrooxidans DSM 10331] gi|256007906|gb|ACU53473.1| inner-membrane translocator [Acidimicrobium ferrooxidans DSM 10331] Length = 339 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 107/322 (33%), Gaps = 29/322 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-------- 89 Y ++G+ IY +FA GL+I G G+L+ + AIG Y + + Sbjct: 7 YAATLGVYFCIYNIFALGLNIQFGYAGILNFTVITFMAIGGYMAGVASLTHEVPSSGIYY 66 Query: 90 ------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 ++ +A +I + + R DYLAI TL I ++ I Sbjct: 67 ILGLGLPWPISMLIGAASAGLLGYLIGLVALRRLRSDYLAIVTLAAGSIIYGLVGNNTKI 126 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 +G G+ + + Y + + + + L R Sbjct: 127 FDGFEGLVGVPQPFNGVLQ-----------LGPNSYSLVFLAFSAVVMAICWLLANRLYR 175 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 + + R IR++ + ++ A + F+G+ G ++P + Sbjct: 176 SPLGRTMRAIREDLDVAEAFGKHTYRVRMIAMVLGCVFVGIGGVLTIWYVTALAPAGWGT 235 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 SE ++ + +I+GG + + + ++ + ++ Sbjct: 236 SETFVIWAALIVGGRGNNTGAVVGSFLVAVLFNEATRF----LPAISSMPNLIPEIRNMC 291 Query: 324 MVIALFLVILMRSHSLLRLRTP 345 + + LV+ R ++ R Sbjct: 292 IGALVILVLWFRPQGVVPERKA 313 >gi|269797728|ref|YP_003311628.1| inner-membrane translocator [Veillonella parvula DSM 2008] gi|294793494|ref|ZP_06758631.1| high affinity branched-chain amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|269094357|gb|ACZ24348.1| inner-membrane translocator [Veillonella parvula DSM 2008] gi|294455064|gb|EFG23436.1| high affinity branched-chain amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] Length = 336 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 121/309 (39%), Gaps = 19/309 (6%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + + +I + + + G LSL ++GAY IL + L I Sbjct: 3 LLNPYYLQIVMFFIINAIMGISIYFTLA-SGQLSLGAAGFMSVGAYVGAILSLKADLPIV 61 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151 + I + +++ +I+GLP+ + +G YLAIATL E+ + I + G +GI Sbjct: 62 VGIIIGGLVASLVAVIIGLPTTRLKGLYLAIATLGFGEVVRVIFLNLDITNGALGLSGIP 121 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + L + + +LL + L + + + + + A+ Sbjct: 122 SIPQELTNYAYEFDLDGLMGID-AVAWGNLMAIIILLAILVLIIAFCVRINNSRVGRAFA 180 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 I+ + A + +++ K+ AF + + G+ G +A + I+P F + + + ++ Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 + GG + + IL + E+ ++ Y + L ++ Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285 Query: 332 ILMRSHSLL 340 + +R +L Sbjct: 286 MAVRPDGIL 294 >gi|73543044|ref|YP_297564.1| inner-membrane translocator:ABC transporter related [Ralstonia eutropha JMP134] gi|72120457|gb|AAZ62720.1| inner-membrane translocator:ABC transporter related [Ralstonia eutropha JMP134] Length = 613 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 128/324 (39%), Gaps = 22/324 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + +++ + + ++ ++G I +Y + A GL ++ G G+ S +G Sbjct: 27 VLTLLFIVVLALMPVLPTPEFWITLGNYIGLYSIVAIGLVLLTGVGGMTSFGQAAFVGLG 86 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS L +++GLS W + V +I+ AC ++GL +++ G YL +AT+ + Sbjct: 87 AYSTAYLTTQFGLSPWFGLLVGLVITMACAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 146 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + G+ L G ++S M+Y++ + L+ Sbjct: 147 GNLEFL-GKYDGLNGIPVLSLFGIELQS--------------GRSMFYLIWAVVLLAVLA 191 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + A R ++ ++ + K+ F V++ ++G +A + ++ Sbjct: 192 VQNLLNSRPGRAMRALKGGGVMAEAMGVNTAWMKVVVFVVAAVLACISGFLYAHLQRAVN 251 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + I + + ++GG+ + +L + + G+ + F Sbjct: 252 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDTLQGLLPKLLGANGNF----- 306 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + + L L++ L Sbjct: 307 --EIIVFGVLLVLLLQYARDGLWP 328 >gi|148549923|ref|YP_001270025.1| inner-membrane translocator [Pseudomonas putida F1] gi|148513981|gb|ABQ80841.1| inner-membrane translocator [Pseudomonas putida F1] Length = 359 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 100/330 (30%), Gaps = 27/330 (8%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L A + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 37 LLPADHALQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYL 96 Query: 86 S----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 W +P + + L L L + Sbjct: 97 MRQAAGDGLPGFMTFLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKG 156 Query: 136 ILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + AG+ + R + S F + ++ + + + Sbjct: 157 VYFSIMTQALTFAGMLLFFRNETGFGGNNGFTSFRTILGFDIAAQGTRAVLFLLTVALLL 216 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S + L R+ +RD + KL + +S+ G+AGA + Sbjct: 217 ASLYLCWRLTRSKFGRLLTAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQ 276 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P + +I V LGG +L ++ G+ F Sbjct: 277 VGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------F 322 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F + LV L ++ L Sbjct: 323 TVAFPEFWLFFLGALFILVTLYLPKGVVGL 352 >gi|111222506|ref|YP_713300.1| ABC transporter permease [Frankia alni ACN14a] gi|111150038|emb|CAJ61733.1| Putative ABC transporter permease protein [Frankia alni ACN14a] Length = 806 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 102/263 (38%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 ++ L G + L ++ + ++ G +G +SL + AY+ Sbjct: 377 LAVVALIPGVFLLSPALRDGLTNTLTGIVICLSIVVLTGYIGQISLAQTSFAGLSAYTVA 436 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 L + +G L I A ++ G+++ LP+L+ RG +LAIATL + ++ Sbjct: 437 SLSTHHGWPFPLPILAGAAVAVVAGVLVALPALRVRGVHLAIATLAFAVAVDKVVFANSW 496 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 I G G V + L + ++ LR Sbjct: 497 INGGYDGATVTTPSLIRSQDTTTHHVLGVAIGDGTQPNPLTLVFCLVVVVALGYLVANLR 556 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ IR N++A + + K+ AF VS+ G+ GA A ++PD F Sbjct: 557 RSLTGRQMLAIRSNERAAAAAGVNVAAVKVLAFGVSAFIAGVGGAVIAYRTGNVTPDKFL 616 Query: 263 FSENIIVISIVILGGMTSLSKIA 285 + ++++ + LGG+ S+S Sbjct: 617 YDKSLMFFAFAYLGGIASVSGAV 639 Score = 42.2 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 40/345 (11%), Positives = 99/345 (28%), Gaps = 31/345 (8%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL------------ 68 + L + L G ++ + + A G+ + G+++L Sbjct: 1 MALLAVILAKGDYRANFFSGGGFALGALVAAIALGVVVTYRGSGVVNLAGAAVAMYAAYV 60 Query: 69 -----NCVIAYAI----------GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113 + G S + A + +++ L Sbjct: 61 YADLRAHGDLFLPPLPNPLAPIEGLVHLAGDDSFSVPHWPTSVSFGAAMGFWPALVLALV 120 Query: 114 SLKFRGDYLAIA---TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 G L +A L + + ++ + +A + + Sbjct: 121 FCALFGLVLHVAVFRPLRHAPVLAKVVASVGVLLFLQAVVVRRFSTTTQVVGPLPFVDKT 180 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 + +V+ + L+ ++ +R+ A R +N+K L + Sbjct: 181 QVDLGVFKITQEQLFVVCLVLVLAVALWALFQRSRFGLAVRAAAENEKGATVLGFSADRL 240 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 + + +S+ G+ G F A+ + P+ + + ++ ++GG TS A Sbjct: 241 AAATWVLSTVVTGLLGIFVASVNSSVDPNTM-PALIVPAVTAALVGGFTSFGWTTLAAFG 299 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 L V L + + ++ + V+ +R Sbjct: 300 LGMQVSLVTFLGANESWFPKAGGLPVPGVDLLVPLVVIVAVLALR 344 >gi|281418381|ref|ZP_06249401.1| urea ABC transporter, permease protein UrtC [Clostridium thermocellum JW20] gi|281409783|gb|EFB40041.1| urea ABC transporter, permease protein UrtC [Clostridium thermocellum JW20] Length = 382 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 117/354 (33%), Gaps = 33/354 (9%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 SIF R++ D I+ LL VV L + ++ + + Y + A G+ ++ G Sbjct: 11 SIFKGRISANDIIITLLFVVLALAPLFL------SDFRTNLLGKFIAYAILALGIDLIWG 64 Query: 62 SLGLLSLNCVIAYAIGAYSYVIL-------------GSRYGLSIWLLIPVSAMISGACGM 108 G+LSL + + +GAY + S G ++ + + Sbjct: 65 YTGILSLGHGVYFGLGAYCMAMYLKLEASNGKLPDFMSWSGQNVLPWFWKPFAYAPVAII 124 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + L + + ++ + + Sbjct: 125 LSVLVPTVLALIIGYLTFKNRIKGVYFSILTQALSIIFVVLFVGQQAYTGGTNGITNFKT 184 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 F FP S ++ +YYV LG L+ W+ ++ + IRD++ Sbjct: 185 IFGFPLSGFSTKVTLYYVALGFLILAFLFCRWIVQSRLGKVLIAIRDSENRARFSGYNPA 244 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 K + +S+ G+AGA F ISP ++ ++ V +GG +L Sbjct: 245 IYKTFVYCISAGLAGLAGALFVPQVGIISPAEMGIVPSVEMVIWVAIGGRGTLVGSVIGA 304 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + + SF + + I+ V++ + L L Sbjct: 305 ILVNSLKSMVSE--------------SFPAVWSYFIGISFIAVVIFMPYGLAGL 344 >gi|157363664|ref|YP_001470431.1| inner-membrane translocator [Thermotoga lettingae TMO] gi|157314268|gb|ABV33367.1| inner-membrane translocator [Thermotoga lettingae TMO] Length = 353 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 124/341 (36%), Gaps = 7/341 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L+ K + ++ + LF + +Y+ + I I ++F+ L+++ G G+ S Sbjct: 5 LSFRVKFISTFVLICLIAFLLFFANRIASEYVILILNLIAINIIFSTSLTLINGITGIFS 64 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY +L + + I LP+ G L A Sbjct: 65 LGHAGFIAIGAYVSTLLTLPVEQKEMTFLIKPLIYPLNQIQISFLPATIIAG--LVAAGF 122 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ + + G+ R+ + I Y Sbjct: 123 GYVVAAPSLRLIGDYLAIATLGLGETIRIVANNAWSITN----GALGLKAIPPYTNIYWS 178 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G F++ II L +++ A + IR++ A ++ + ++ +F + S F G+ G+ Sbjct: 179 WGWAFITVLIIASLVKSSYGRALKAIREDPIAAKAMGINVFSHQVMSFVLGSFFAGVGGS 238 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A I P F F++ ++ + +LGG+ S+S A+ +E + + Sbjct: 239 LWAHLITTIDPKSFTFTKTFEILIMAVLGGLGSISGAIIGAAVYTVGLEFLRFLESPFKI 298 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + F ++ L +++L ++ S Sbjct: 299 GPILFP-GIPGMRMVVLSALLIILMLFWQRGIMGREELSWE 338 >gi|322391653|ref|ZP_08065121.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus peroris ATCC 700780] gi|321145464|gb|EFX40857.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus peroris ATCC 700780] Length = 318 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 82/340 (24%), Positives = 142/340 (41%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L V +L+ + + A + + QI I ++ A GL+++VG G SL Sbjct: 6 KANLAWLGLLVAGFILIQVLVLAGVLNLFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+G S + + + + A+ISGA +I+G+P+L+ +GDYLA+ATL Sbjct: 66 HAGFMAIGAYAAAIIGSKSPTYGAFFGAMLLGALISGAVALIVGIPTLRLKGDYLAVATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++EI + +I +TNG AGI + Sbjct: 126 GVAEIIRIFIINGGSLTNGAAGILGIPNFTSWPM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L+ L R+ I ++R+++ A S+ K+ AF + +AG+ Sbjct: 161 YIFAVLTTIATLNFLRSPIGRTTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + P + F +I ++ IV+ GG+ S++ A +L + L + Sbjct: 221 LQAGFIGSVVPKDYTFINSINILIIVVFGGLGSITGSIVAAIVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305 >gi|209520547|ref|ZP_03269304.1| inner-membrane translocator [Burkholderia sp. H160] gi|209499031|gb|EDZ99129.1| inner-membrane translocator [Burkholderia sp. H160] Length = 650 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 134/305 (43%), Gaps = 33/305 (10%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + ++ILI V+FA L ++G GL S + +GAY + L + + Sbjct: 344 PYMPVLLVEILIAVLFATSLHFIMGPGGLHSFGHAAYFGLGAYGAALFLKVLNLPMEAAL 403 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++ ++ G ++ G YLA+ TL ++I +++ +W +T G GI Sbjct: 404 LLGPLLAVVGALVFGWFCVRLSGVYLAMLTLAFAQIVWSVVFQWDDVTGGSNGI------ 457 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +PS+++ + YY+ L L ++ + + + A R RD+ Sbjct: 458 ------------LGLWPSNWLSSPVAFYYLTLACAVLGVWLLRRMLFSPLGYAMRASRDS 505 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + ++F +++ F G+AG+ +A S+ ISP++ S ++ + +V+LG Sbjct: 506 ALRAEAIGIDVKRVQWASFVIAALFCGLAGSLYAFSKGNISPEVISVSRSVDGLVMVLLG 565 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +LS A+ + + Y+ L+ A+ L+++ Sbjct: 566 GLQTLSGPIVGAAVFTWLQDTVARQTDYW---------------QALLGFAILLLVVAFP 610 Query: 337 HSLLR 341 ++ Sbjct: 611 QGIVG 615 Score = 63.7 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 92/307 (29%), Gaps = 18/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + + A GLS++ G +++ Y G AYS WL Sbjct: 9 LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYVAYSIASRFGHTAGGFWLS 68 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +A+ G ++ + L+ + L+ + I G ++ Sbjct: 69 VLAAALAVAVLGALVEIVVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPDDLFGPRA 128 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +++ + + L RT R Sbjct: 129 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + F V + G+ GA +V++ Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A ++ + LC G+ ++ S + + + +V+++R Sbjct: 237 GGMGSIPGAFVAALLIAEIKALCIGIGH---VTIFGIGLSLSRFTLVAEFVVMAVVLVVR 293 Query: 336 SHSLLRL 342 LL Sbjct: 294 PWGLLGR 300 >gi|209519227|ref|ZP_03268029.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. H160] gi|209500307|gb|EEA00361.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. H160] Length = 544 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 82/291 (28%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + L +++ + Sbjct: 270 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRFAPNLFDWYPLLAIPAAFVAAALVGIV 329 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + + + Sbjct: 330 LER--LVLKHLYGRPLETLLTTFGVSLILIQATRMLFGAQNVQVVNPAWMSGGVTVLPNL 387 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + A L RT + R + N++ + AFA Sbjct: 388 ILPYNRLAILAFSLIVVAIAWAVLTRTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 447 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L V + Sbjct: 448 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVLGGFGLGLVSKA 505 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 506 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 543 >gi|284167063|ref|YP_003405341.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] gi|284016718|gb|ADB62668.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] Length = 386 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 114/287 (39%), Gaps = 17/287 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V + + + + L +VMF V G G +S + +AIG Sbjct: 29 IAVLAFISLALFPSVFPVLTVLQ-MVAALYFVMFVISWDFVSGYTGQVSFGHTLFFAIGG 87 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L YG++ + + V ++ G+++ LP+L+ G YLA+ TL+ I + Sbjct: 88 YATTLLNLEYGVAPAVGVVVGVALAAIAGLLLSLPALRIEGHYLALFTLLPPLILLQVFQ 147 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 ++ G G+ A+ L FV YY+ L L + Sbjct: 148 MYRDTFGGSQGLRNAEPLID--------------AGDFVATANASYYLTLAAFVLVFGVT 193 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + R+ + +++++ A S+ K+ AF VS+A G AGA F + + Sbjct: 194 WVITRSDTGAIFTAVKESEDAVTSVGINPNKFKVYAFVVSAAIGGFAGALFVHTPAGSAS 253 Query: 259 DMF--KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 + S I ++ I+GG +++ ++ +E +++ Sbjct: 254 PSQLLELSVMIEILLAGIIGGFGTITGAVVGGFLIYWGLEWFSRLDW 300 >gi|292494156|ref|YP_003533299.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] gi|291369206|gb|ADE01436.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] Length = 384 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 104/283 (36%), Gaps = 3/283 (1%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + I ILI+ +FA G ++++G GLLS + + +Y+ + +I V Sbjct: 62 GLAITILIWSIFALGFNLLLGQTGLLSFGHAMFFGTASYAAALFAIHVYNDPLAVIVVGT 121 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + + A G + L L+ Y +I L + + + + R LG Sbjct: 122 LAAVALGAVAALILLRLHTVYFSIVALAIGQFLYFLAREPLVEITKGINGLEVPRSDVLG 181 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + +Y + + I +R++ ++ IR+N+ Sbjct: 182 VFELEHQYG---GLLGELVVNNLYLFVGVFFVAVVASITRIRKSPYGLIFKAIRENETRT 238 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + K +AF +S+A +G+AG A + + +S + V+ + +LGG+ + Sbjct: 239 AFVGLDVWRYKFAAFLLSAAIVGLAGGLMAVNTQFAGVERLYWSVSGDVVVMTVLGGLGT 298 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 L+ T + + G LL SF Sbjct: 299 LAGPVIGTFVFFYFKGIVNGFPTLGNYWLLLLSLSFTTVVWVY 341 >gi|114328150|ref|YP_745307.1| branched-chain amino acid transport system permease livM [Granulibacter bethesdensis CGDNIH1] gi|114316324|gb|ABI62384.1| branched-chain amino acid transport system permease protein livM [Granulibacter bethesdensis CGDNIH1] Length = 319 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 16/313 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVS 99 ++ + L + A GL++V G G LSL AIGA++ + G + + Sbjct: 8 AVILPFLSLSIAALGLTVVTGRAGQLSLGTGAFMAIGAFAAYDLDAYVPGTPQLVSLLFG 67 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +++ A G+++GLPSL+ RG YLA+ TL + +L Sbjct: 68 GLVAAASGLVVGLPSLRLRGFYLAVTTLAAQFLVPWLLTNIGWF-------------SLD 114 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + S + + + +++L L RT W +RD + A Sbjct: 115 DPSGVLSAPVLKIGSFVFDTPVARAGFAAVVVVVLTAVLLRLSRTKAGRDWIAVRDMETA 174 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGM 278 + ++ KL+AFAVSS F G+AG +A A + P F + + ++ IVI+GG Sbjct: 175 ATVVGVPVLRTKLTAFAVSSFFCGVAGVLWAFAYLRTVEPAGFDLNLSFRILFIVIIGGA 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S TA ++ + L + Y ++ N+ + + + L+++ Sbjct: 235 GSFVGAFFGTAFMVAMPLLLSRLADYIGGGVIDSGQLANIEKMLIGGL-IVLILIREPDG 293 Query: 339 LLRLRTPSNFLER 351 L L P + Sbjct: 294 LSALLRPRQATRK 306 >gi|301062184|ref|ZP_07202866.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] gi|300443696|gb|EFK07779.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] Length = 361 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 69/330 (20%), Positives = 140/330 (42%), Gaps = 20/330 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ LL+ + Y S+ + M A G+ +++G GLL+L A+GAY Sbjct: 26 MILLLLVAFVVMPLLLDGYWISVATMVGYTAMGALGVQLLIGYAGLLTLGHAAFIAVGAY 85 Query: 80 SYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + +L ++ + I + +++G ++ GLPS K +G YL + T+ Sbjct: 86 TSTMLVLQFPWPQFMLDAGLAYPVSILAAGVVAGFWSVLFGLPSAKVKGFYLILTTMAAQ 145 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 I + ++ G G + + + E+ +Y+V+ + Sbjct: 146 FITVDFVLTQYISQIGGRGQAFSLPPGTIKIGPW-----------VIDTELSIYFVMAVL 194 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L ++ L R+ AW IRDN A +L II+ KL AF V+ G+AGAF+ Sbjct: 195 LSLMIIVLANLLRSKPGRAWVAIRDNDIAAEALGINIIWYKLLAFFVAGFMAGVAGAFWV 254 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + +SP+ F++ ++ ++ ++++GG+ S+ + ++ V+EL + Sbjct: 255 CNTAALSPEHFQWFLSLWLVGVILIGGVGSIQGAVFGSIFMVVVMELLQLAVIPLADYFP 314 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + F +A+ ++ + L Sbjct: 315 QLLMDFAYIKDMAFGLAICAFLIYEPNGLA 344 >gi|229591416|ref|YP_002873535.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229363282|emb|CAY50384.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 336 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 120/337 (35%), Gaps = 30/337 (8%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 L K LL V+ L+ + ++ +ILI+ M A ++++G G Sbjct: 6 PLPFAKTQSRAMLLWVLAVLIGLPLTLPSA------TLATEILIFAMAALACNLLLGYTG 59 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 LLS I + GAY +L L ++ + +A+ G +++G +++ G Y + Sbjct: 60 LLSFGQGIFFGAGAYCAALLMIHLQLGLFTALLGAAIAGGFLALLVGALAIRRTGIYFVM 119 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL S++ + T G G+ R IR + Y Sbjct: 120 LTLAFSQMAYFVAYTLSDWTGGDNGLLSVPRPE---------IRLGDTVLLSLADARAFY 170 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + + L + + + IR+N+ ++ K+ F +S A G+ Sbjct: 171 GFVAVLFLLIFIGARRVIASPFGSTLMAIRENETRASAIGYDTRHFKILVFVLSGAVTGI 230 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA +A + + + ++ + I+GG SL ++ + + + Sbjct: 231 AGALYAMLLHFVPLSNIDLAMSENILIMTIVGGTGSLFGSLLGAGSIVLLGDFLSDLWPR 290 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L+ + L LV++ L Sbjct: 291 W---------------LMLLGVILILVVIFMRGGLWG 312 >gi|288961429|ref|YP_003451768.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288913737|dbj|BAI75224.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 351 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 77/344 (22%), Positives = 131/344 (38%), Gaps = 16/344 (4%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + + ++ + L S+ D++ L + GL+I+ G G Sbjct: 10 PAAAPRRVSPALPGIALLLIVAYGVLPLVGSEYLFDAILTPFLALALAGLGLNILTGYAG 69 Query: 65 LLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +SL A+GAY+ L R G+ L I ++ +I+ A G++ GLPSL+ RG YLA Sbjct: 70 QVSLGSSAFMAVGAYAAYNLALRLPGVPFLLDILLAGLIAAAVGLLFGLPSLRLRGFYLA 129 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 ++TL Q I K +N V + Sbjct: 130 VSTLAAQFFVQWIFNKVGWFSNDSPSGIVTVPPL-------------SVAGFTLDSSAGR 176 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y LG+ + L + A +RD++ A + ++ KL AFAVSS IG Sbjct: 177 YLFALGVVTAVTLAVWRLVESPTGRALVALRDHETAARVIGIPVLRVKLLAFAVSSFIIG 236 Query: 244 MAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 +AG +A A + P F + ++ IVI+GG+ SL A+++ L + Sbjct: 237 VAGVLWAFAYLRTVEPAGFNLDRSFQILFIVIIGGLASLRGAFLGAALIVVFPLLLARLG 296 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 L M ++ + + ++ L L + Sbjct: 297 EALLGGLFDSGV-LEMSQRIVLGLLIVTFLIAEPAGLTALLDRT 339 >gi|126731897|ref|ZP_01747701.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] gi|126707724|gb|EBA06786.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] Length = 619 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 122/315 (38%), Gaps = 34/315 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + +++ + I +L++ +FA L ++G+ G++S + GAY+ +L Sbjct: 326 PLFADRFVLILLIDMLVFALFAASLHFILGTGGMVSFGHAAFFGGGAYAAALLVYHLETP 385 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + +G + +G ++ G Y A+ TL S++ ++ +W+ +T G G+ Sbjct: 386 MEIAFLFAPLAAGLLALGIGWFCIRLSGVYFAMLTLAFSQLVWSMAYQWRDLTRGDDGLV 445 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +P+S++ YY L ++ + + A R Sbjct: 446 NI------------------WPASWLSGTTPFYYFTLAFGVGGILVLRHIIHSPFGYALR 487 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 RD+ + ++ + + AF ++ G+AG F S+ + P + + + Sbjct: 488 AGRDSPRQAEAMGINVKRVQHVAFGLAGVMAGLAGGIFVFSKGSVFPTELEIGASFDALI 547 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V LGG+ +L+ + V + + ++ + + V Sbjct: 548 VVFLGGVKTLAGGVVGAGFMTVVEDWLTRL----------------EYWRLVLGLVIIAV 591 Query: 332 ILMRSHSLLRLRTPS 346 +++ ++ + Sbjct: 592 VIIAPEGIVGTLRST 606 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 98/308 (31%), Gaps = 28/308 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96 + + + A GLS++ G +++ Y +GA+ V + + W I Sbjct: 8 LLTGLANACSLFLVASGLSLIFGVTRIVNFAHGSFYMLGAFVGVTLMQVLPGAMGFWGAI 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ ++ GA G + + L+ + L+ + ++ + G Sbjct: 68 LLTGLVVGAIGAFVEMVVLRPIYRAPELFQLVATFGVILVIQDLALMVWGAEDRMGPRAP 127 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + + ++ + ++ + +T + R + Sbjct: 128 GLRGV----------WRIFGEPVPKYDLVIIAITPLILFALWYLITKTRVGVLVRAATQD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + FA+ SA G GA + F+ +V++G Sbjct: 178 REMVGALGVNQAWLFTGVFALGSALAGWGGALQLPKGGA--DLLMDFNIIGAAFVVVVIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL A ++ + LM + + +V+++R Sbjct: 236 GMGSLPGAFIAAVLISVLNVFGVTY--------------LPQSTLVLMFVVMAVVLIIRP 281 Query: 337 HSLLRLRT 344 + LL Sbjct: 282 YGLLGREE 289 >gi|289522282|ref|ZP_06439136.1| branched-chain amino acid transport protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504118|gb|EFD25282.1| branched-chain amino acid transport protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 330 Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 123/323 (38%), Gaps = 24/323 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ + + + + + + L++ + +I+ G G +S + + IGAY Sbjct: 14 VLLLIAVLPLIPGPLQSPFAQHVLVLTLLFACMSQAWNILGGYCGQVSFGHSVFFGIGAY 73 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + YGL+ W + A+++ +I+ P + +G Y AIAT + EIF + + Sbjct: 74 GAGMAVVTYGLTPWPGAIIGALLAAIVSLIISYPCFRLKGHYFAIATFAIVEIFNRLFMV 133 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W + Y + + + YY G+ L S + Sbjct: 134 WYWVGGALGLDYPIIEEGWKNFM-------------WFQTKTQYYYGAFGLFILIFSFVR 180 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 W+ + + +RD Q+A +L KL+A A+S+ + GAFF R+ P Sbjct: 181 WMEVNKLGYYLKAVRDGQEAAEALGVNSTAVKLTAIAISAFLAALCGAFFVQYNLRVDPP 240 Query: 260 M-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 M ++ + I ILGG+ + AILI + E + + Sbjct: 241 MVMSLDMSMRFVLITILGGLGTFWGPLLGAAILIPLQEYSRAIWGGLGGGV--------- 291 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + I + L++ + ++ Sbjct: 292 -DLIIFGILIVLIVTRQPKGVMG 313 >gi|167841876|ref|ZP_02468560.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia thailandensis MSMB43] Length = 337 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 123/312 (39%), Gaps = 18/312 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L+++ +L AVV L L L G S+ ++L++ + A G ++++G GLLS Sbjct: 25 LHRHRHVLLAAAVVCALPLVLRSG---------SLATEVLVFALAALGCNLLLGYTGLLS 75 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + + +G+Y+ ++ +R S+ + + + + A ++G S++ RG Y + TL Sbjct: 76 FGQGVFFGLGSYAAGLVLTRGVPSVPVALAAAIALGAAAAALVGWFSIRQRGTYFVMLTL 135 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++F + +T G G+ R + Y + Sbjct: 136 AFGQLFYFVAYTTPELTGGDNGLLDIPRPALGAL---------GRTLVPLDSPWQYYGFV 186 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + ++ + ++ IRDN+ + + KL AF +S A G+AGA Sbjct: 187 AALFIAAFWLMARVSQSVFGRTLLAIRDNEARAAAAGYDVKRFKLVAFVISGAVTGLAGA 246 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + + +++ + ++GG +L A + + + + Sbjct: 247 LHALMTGIAPLSNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRWLL 306 Query: 308 SLLKFDCSFNMR 319 L + ++ Sbjct: 307 LLGLALIAVSLF 318 >gi|163859061|ref|YP_001633359.1| putative branched-chain amino acid transport system permease [Bordetella petrii DSM 12804] gi|163262789|emb|CAP45092.1| putative branched-chain amino acid transport system permease [Bordetella petrii] Length = 354 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 79/343 (23%), Positives = 139/343 (40%), Gaps = 23/343 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + + + F+ + S + ++ I LI + A GL+I+VG Sbjct: 18 QIFPIRQDR------IFIGLLLAVAFVAVPLLASDYLLRAILIPFLILSLAAVGLNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY+ G R+ ++ I + + G++ G+PSL+ RG Sbjct: 72 YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLVVQILLGGCFATLVGVLFGIPSLRIRGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL ++ TN V+ + Sbjct: 132 YLAVATLAAQFFVDWAFLRIAFFTNYSPSGSVSVPPLTAF-------------GLPIDTS 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +L + A + L R AI W IRD A + ++AKL+AFAVSS Sbjct: 179 LQRYLFVLVFVVVFALLAKNLVRGAIGRQWMAIRDMDVAAAVIGIRPMYAKLTAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +G+AGA + P F + + ++ +VI+GG+ S+ A ++ V Sbjct: 239 IVGVAGALWGYIHLGSWEPLAFDLARSFQLLFMVIIGGLGSIMGGFFGAAFIVLVPVALT 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ L + + + ++ H L RL Sbjct: 299 NV--PHWLGLSLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339 >gi|330815765|ref|YP_004359470.1| Branched-chain amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] gi|327368158|gb|AEA59514.1| Branched-chain amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] Length = 537 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 83/291 (28%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + +++ + Sbjct: 263 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFQRYAPGAFDWYPLVAVPASFVAAALVGIV 322 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + S + + Sbjct: 323 LER--TVLKHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVSNPSWMSGGVTLMQNL 380 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L+ + A L RT + R + N++ + AFA Sbjct: 381 ILPYNRIAILVFSLMVVAIAWGVLTRTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 440 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L V + Sbjct: 441 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVVGGFGLGLVSKA 498 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 499 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 536 >gi|311106030|ref|YP_003978883.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310760719|gb|ADP16168.1| inner-membrane translocator 36 [Achromobacter xylosoxidans A8] Length = 298 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 73/311 (23%), Positives = 137/311 (44%), Gaps = 17/311 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ ++ I ILIY++ A+GLS+ G GL++ V +AIGAY+ +L + + + Sbjct: 3 AYLIAIAIGILIYMLLAFGLSLHYGFTGLINFGHVGFFAIGAYTSALLSLKGVPIP-ISM 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +A ++ +G+ +L+ DYLAI TL SE + +L + +T G G+ RL Sbjct: 62 VAAAAVAALAAWPLGMIALRLGSDYLAIVTLGFSESVRMMLQTEEWLTRGMHGLPGIPRL 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + S ++++ +L+ + + +I + R+ +RDN Sbjct: 122 FAGWA-------------SPQTVDLWIMLLLVAVNAGALLLIHLVIRSPFGRVIEAVRDN 168 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A +L K + + + G+AGAF A ISP+ F + +ILG Sbjct: 169 EVAVRALGKDPARFKTRSLMLGAGLAGLAGAFQAHYLTFISPEQFVPLITFYIWIAIILG 228 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ LS + T +L+G +E + + + ++ +AL V+L R Sbjct: 229 GVGRLSGVVAGTVLLVGFLEGSRFVRDFVGGIS---EVQMASVRIGVIGLALICVVLYRP 285 Query: 337 HSLLRLRTPSN 347 + + + Sbjct: 286 QGIFGNTSATR 296 >gi|170693061|ref|ZP_02884222.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|170142059|gb|EDT10226.1| inner-membrane translocator [Burkholderia graminis C4D1M] Length = 650 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 142/324 (43%), Gaps = 33/324 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA + L+L L + Y+ + ++ILI V+FA L ++G G+ S + +G Sbjct: 325 LAAIMLLVLLLAPLLANAFPYMPVLLVEILIAVLFATSLHFIMGPGGMHSFGHAAYFGLG 384 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY + L + + ++ +++ ++ G ++ G YLA+ TL ++I +++ Sbjct: 385 AYGAALFLKVLNLPMEAALLLAPLLAVGGALVFGWFCVRLSGVYLAMLTLAFAQIVWSVV 444 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W +T G GI +P+ ++ + YYV L + + Sbjct: 445 FQWDDVTGGSNGI------------------LGLWPADWLSSPVAFYYVTLVCAVIGVWL 486 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + + A R RD+ ++ + + +AF ++S F G+AG+ +A S+ IS Sbjct: 487 LRRMLFSPLGYAMRASRDSVLRAEAIGIDVKRVQWAAFVIASLFCGLAGSLYAFSKGTIS 546 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P++ S ++ + +V+LGG+ +L+ A+ + + Y+ Sbjct: 547 PEVISVSRSVDGLVMVLLGGLQTLTGPIVGAAVFTWLQDTVARQTDYW------------ 594 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 L+ A+ L+++ ++ Sbjct: 595 ---QALLGFAILLLVIAFPQGIVG 615 Score = 62.6 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 18/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + + A GLS++ G +++ Y G AYS WL Sbjct: 9 LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYIAYSIASRFGHTAGGFWLS 68 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +A++ G ++ + L+ + L+ + I G ++ Sbjct: 69 VLAAALVVATLGALVEVIVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPEDLFGPRA 128 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +++ + + L RT R Sbjct: 129 P----------HLAGAVNFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + F V + G+ GA +V++ Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLESIGNAFVVVVV 236 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A I+ + LC G+ ++ S + + + +V+++R Sbjct: 237 GGMGSIPGAFVAALIIAEIKALCIGIGH---VTIFGVGLSLSRFTLVAEFVVMAVVLVVR 293 Query: 336 SHSLLRL 342 LL Sbjct: 294 PWGLLGR 300 >gi|197121846|ref|YP_002133797.1| inner-membrane translocator [Anaeromyxobacter sp. K] gi|196171695|gb|ACG72668.1| inner-membrane translocator [Anaeromyxobacter sp. K] Length = 368 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 145/346 (41%), Gaps = 19/346 (5%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 R + ++ LL + + + Y+ MG+ + + V+ ++V G G Sbjct: 10 PSRAPRGFSVVGLLVFLAVVAALAVFPQFVKKPYVLHMGVLLFLAVIQGQAWNVVGGYAG 69 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 S+ + +GAY V+L ++ W + + S +++G + + RG Y + Sbjct: 70 QYSVGHAAYFGVGAYVTVMLLEVNKIAPWWGVWAAMAASVLLSLVIGSITFRLRGPYFVL 129 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 A++ ++EI + + +K +T G G + + + R Y Sbjct: 130 ASISVAEIIRLATLYFKDLTRGAEGFLLGEIPTLNLFGNEIMFFGKR----------PFY 179 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 +V LG+ ++ ++ ++ + + ++ IR++Q A SL + F K A ++S+AF + Sbjct: 180 FVGLGLAVVAVAVNWIVQHSKLGYYFQAIREDQDAAHSLGINLSFYKNVALSISAAFTAL 239 Query: 245 AGAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 AG F+A I P+ F ++ ++ + I+GG+ ++ +L+ + E+ Sbjct: 240 AGGFYAMFVKFIDPNTVFGLDVSVQIVLLCIIGGIGTIVGPVIGAVVLVPLSEILRNPKG 299 Query: 304 YYFNSLLKFDCSF--------NMRHTTLMVIALFLVILMRSHSLLR 341 +L D F + H + I + LVIL +L Sbjct: 300 LVQVGVLSPDSGFVTFVERYLSNAHLLVYGILVVLVILFAPEGVLG 345 >gi|121611517|ref|YP_999324.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121556157|gb|ABM60306.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 316 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 123/295 (41%), Gaps = 12/295 (4%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + V L L A Q++ + ++LIY + A L++++G G++S Sbjct: 2 KRGAIASFLVGLGLAALPVLLAAAGQEFYLGLLTRVLIYALAATSLNLLLGYGGMVSFGH 61 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 IG Y I S W+ P++ I G +MG SL+ RG + + TL ++ Sbjct: 62 AAFLGIGGYVVAIAAQHGVGSAWVAWPLALAIVALLGAVMGAISLRTRGVHFLMITLALA 121 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 ++F + + + G G+ +A R F F YY+ L + Sbjct: 122 QMFYYVFVSLRS-YGGDDGLSMARRSSFGWEAWWPTGGDMGF-----------YYLALVL 169 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L+ ++ L + + +R+N+ ++ + KL AF +++ G+AG Sbjct: 170 LALALLVLHRLIPSRFGSVLIGVRENETRMSTIGFPVYRYKLVAFVIAAVLCGLAGVLNV 229 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 ISP + +S++ +++ +VI+GG+ A+ +G+ E+ + Sbjct: 230 ELNRFISPSVMHWSQSGMLMVMVIIGGLGRPWAGVVGAAVFLGLEEVLSHYTERW 284 >gi|254557556|ref|YP_003063973.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|254046483|gb|ACT63276.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus plantarum JDM1] Length = 320 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 73/339 (21%), Positives = 137/339 (40%), Gaps = 43/339 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + V+ +++ +I++M + I I V+ A GL++++G G SL Sbjct: 6 KTNMAWLGVMVIGFVVIDGLELIGVINSFIENMLVTIGINVILAVGLNLIIGFAGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ +L + V +I+ +I+G+P+L+ RGDYLAIAT+ Sbjct: 66 HAGFMAIGAYATGIMTQTMATPAGFYLSMIVGMVIAMVAAVIVGIPTLRLRGDYLAIATM 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EI + ++ K F I + + + Sbjct: 126 GAAEIIRILINNLKITNGAA--------------------------GLFNIPALASWATV 159 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + L+ I + + A +RD++ A ++ KL+AF +A + G+ Sbjct: 160 YVLMCLTTIITVNFIHSRGGRAVMAVRDDELAAGAMGINTTRWKLAAFVFGAATAAIGGS 219 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I+P F +I ++ IV+LGG+ S++ A +L + + Sbjct: 220 LHAAYIQTIAPGDFNIMASIAILIIVVLGGVGSITGTFVAAIVLGALDTILQNF------ 273 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + +AL L+++ + LL S Sbjct: 274 ---------GTIRMIIYSLALILIMIFKPAGLLGTWEFS 303 >gi|269928618|ref|YP_003320939.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] gi|269787975|gb|ACZ40117.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] Length = 350 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 119/306 (38%), Gaps = 27/306 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y S+ +I+I+ +F L+++VG GL SL + G Y+ +L R LS + Sbjct: 35 DYPLSVLTEIVIFSLFVMSLNLLVGYTGLPSLGHSAFFGTGGYAVALLAIRAHLSAVPAL 94 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V+ + A ++ G L+ G Y I TL ++++ I+ W+ +T G G+ R Sbjct: 95 IVAVLAGIALALVTGPFVLRTSGAYFLILTLSLTQVLFGIVWLWRGMTGGDDGLPGVPRP 154 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F + V YYV+L + ++ + + W+ R+ IR+N Sbjct: 155 ELP------------FLTGLVGSWTNFYYVVLLVVAIAVATLWWIVRSGFGLTLVGIREN 202 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ L + K + ++ + +AG FA + + P + + +VILG Sbjct: 203 ERIVEGLGYPTWWTKYIVYILAGGYAALAGGLFAYFKGYVGPGQLSWLTAGEALVMVILG 262 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G + +++ + + ++ + L +L Sbjct: 263 GAGTFWGPVLGATVVLLLRYEVSSFTQRWET---------------ILGLVFILAVLFLP 307 Query: 337 HSLLRL 342 L RL Sbjct: 308 EGLARL 313 >gi|328955200|ref|YP_004372533.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Coriobacterium glomerans PW2] gi|328455524|gb|AEB06718.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Coriobacterium glomerans PW2] Length = 293 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 98/310 (31%), Gaps = 24/310 (7%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y+ +Y + A G ++V G +L+ +GAY + G W+ Sbjct: 5 SQYLLGGISLGSVYAIIALGYTMVYGIAKMLNFAHGDIIMVGAYVSFSATTYLGAPGWVS 64 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 ++ + GM++ + + +A LI + L + G A + Sbjct: 65 YLMAIALCAVLGMLIEGLAYRPLRHAAPLAVLITAIGVSYFLQNSAQLIWGAAPKHFTSL 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 T + + + + ++ ++ RT A R Sbjct: 125 ASVPVLT----------HLTGLPISEVSLITVFTCVAIMIGLMWFISRTRTGKAMRACSQ 174 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + +A + + + FA+ SA +AG + + P I + + Sbjct: 175 DAQAAQLMGINVNRTISTTFAIGSALAAIAGVLLCSYSPVLQPTT-GSMPGIKAFTAAVF 233 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ SL +L V L + + F L +V+L+R Sbjct: 234 GGIGSLPGAFIGGILLGVVEALAKAYLSSSLANSIVFG-------------VLIIVLLVR 280 Query: 336 SHSLLRLRTP 345 LL R P Sbjct: 281 PAGLLGRRVP 290 >gi|220907669|ref|YP_002482980.1| urea ABC transporter permease UrtC [Cyanothece sp. PCC 7425] gi|219864280|gb|ACL44619.1| urea ABC transporter, permease protein UrtC [Cyanothece sp. PCC 7425] Length = 398 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 94/328 (28%), Gaps = 28/328 (8%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--- 84 Q + ++ + L + A G+ ++ G G+LSL I +A+G Y+ + Sbjct: 40 PPWLNAIGQSFRVNLLGRYLSLGIVALGIDLIWGFTGMLSLGHGIFFALGGYALAMYLQL 99 Query: 85 ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI-------F 133 G + + L A L + Sbjct: 100 QLPEGQIPDFFPLYGVTELPAFWAPFYSLPFTIIAIIGIPTLVAAALGYLIFRNRIRGVY 159 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 +IL + I + F +S + Y + + Sbjct: 160 FSILTQAALIVFFNFFNGQQKLINGTNGLKTDTTTIFGMVTSSDQVQSVFYALSVVFLVA 219 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++ WL I IRD++ K+ FAVS+ G+AGA + Sbjct: 220 AYALCRWLTSGRIGRLLIAIRDDESRVRFSGYDPTDFKVLVFAVSAGLAGIAGALYTVQS 279 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I+P + +I ++ V +GG +L ++ L Sbjct: 280 GIITPKSMDIAFSIEMVIWVAVGGRGTLVGAILGDLVVNFAKSLLSE------------- 326 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +V+ + L+ Sbjct: 327 -QFPEIWLFFQGALFLIVVTVLPGGLVG 353 >gi|221633379|ref|YP_002522604.1| branched-chain amino acid ABC transporter permease [Thermomicrobium roseum DSM 5159] gi|221155630|gb|ACM04757.1| branched-chain amino acid ABC transporter, permease protein [Thermomicrobium roseum DSM 5159] Length = 350 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 130/332 (39%), Gaps = 27/332 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ PL + L Y S+ +ILI+ +FA L++++G GL SL + G Sbjct: 14 AIGVPLAVLLLAAPAFLPTYPLSVLTEILIFSLFAMSLNLLLGYAGLPSLGHSAFFGTGG 73 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L G+ + + ++ + A ++ G L+ G Y I TL ++++ I+ Sbjct: 74 YAVGLLAKYLGIPAPVALLIAVVAGVALALVTGPFVLRTHGAYFLILTLSLTQVLFGIVW 133 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W+ +T G G+ F V YY+ L + ++ + Sbjct: 134 LWRRVTGGDDGLPGIPTPKLP------------FLVGRVSDTANFYYLALVVVGIALLTM 181 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 W+ R+ A IR+N++ L K +A+ ++ + +AG FA + + P Sbjct: 182 AWIVRSPFGLALIGIRENERYLAGLGYPTWTLKYAAYTIAGGYGALAGGLFAYFKGFVGP 241 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + +VILGG + A+++ + +F Sbjct: 242 GQISWLLAGEGMVMVILGGAGTFWGPIIGAALVLLLR---------------YEVSAFTQ 286 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 R ++ I L +L+ ++RL L Sbjct: 287 RWVMILGIVFILTVLLLPQGIVRLPDRIRQLR 318 >gi|134296670|ref|YP_001120405.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134139827|gb|ABO55570.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia vietnamiensis G4] Length = 316 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPQLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAVVCACVGYTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + + L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVVLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|313897093|ref|ZP_07830640.1| branched-chain amino acid ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974540|gb|EFR40008.1| branched-chain amino acid ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 316 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 73/327 (22%), Positives = 127/327 (38%), Gaps = 41/327 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L A+ ++ GA + I + +M A L+++ G G SL Sbjct: 11 MLLFALAVYGVIMGLTGAGVLSAFWQLNLIFAGLNIMLAASLNLINGYTGQFSLGHAGFM 70 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AIGAY VIL + + L + + +G G ++GLP+L+ RGDYLAIATL + EI + Sbjct: 71 AIGAYVGVILTTNFHLPFIVALLAGGAAAGLLGALIGLPTLRLRGDYLAIATLGLGEIVR 130 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +I + G AG L + + + Sbjct: 131 IFIINVPYV-GGAAGFKGIPHLTNFT-------------------------WVFFIMLAT 164 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 II + A IR+N+ A ++ K+ AF + +AF G+AG F + Sbjct: 165 LFIIKNFVNSRHGRACLAIRENEIAAEAMGINTTRYKVLAFTIGAAFAGVAGVLFGHNMY 224 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP F F ++ ++ +V++GG+ S++ ++ + Sbjct: 225 ILSPASFTFMQSFNILIMVVMGGLGSMTGSIAGALVVTFLSAALASF------------- 271 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + +AL L++ R L Sbjct: 272 --PNARMIVYALALILMMFYRPQGLFG 296 >gi|291279353|ref|YP_003496188.1| branched-chain amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754055|dbj|BAI80432.1| branched-chain amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 311 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 125/304 (41%), Gaps = 29/304 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y S+ ILI M A GL+I++G G++SL + IGAY IL Y S Sbjct: 25 NEYYLSLISYILINAMLASGLNILLGYAGIISLCQASFFGIGAYLSGILTVHYSYSPIAT 84 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + A+I+ +++ P+LK G YLA+ATL I + T G +G+ Sbjct: 85 VFIGAIITFIVAILIAYPTLKLHGHYLAMATLGFGMIIYIFANELDIFTGGPSGLVGIPY 144 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 G + ++ Y + + ++ ++ ++ +S +R IR+ Sbjct: 145 FSLFGFEFDTELKN--------------YALFAFLYLITVVLLELFDKSFLSYDFRFIRE 190 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + K+ FAV ++F + G+F++ ISP + +I ++++VI+ Sbjct: 191 SEHASSAFGIDFHKEKVILFAVIASFSSIIGSFYSFYSQFISPTSIGINYSIEILAMVII 250 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S I+ + EL Y + L I+ Sbjct: 251 GGLGSTYGGIIGAIIISLIPELFASFEDY---------------EILIYGGILAFCIIFF 295 Query: 336 SHSL 339 + + Sbjct: 296 PYGI 299 >gi|313681075|ref|YP_004058814.1| amino acid/amide ABC transporter membrane protein [Oceanithermus profundus DSM 14977] gi|313153790|gb|ADR37641.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Oceanithermus profundus DSM 14977] Length = 356 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 21/307 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + + I + A GL+++VG G +SL +GAY+ L L Sbjct: 56 PGYPVYVLTLVAIAAIGALGLNLLVGGAGQISLGQAAFLGVGAYAASHLAGPLA---PLG 112 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + +++ A G+++GLPSL+ +G YLAIAT+ + + W+P+T G G + Sbjct: 113 ILLGGVVAAAIGVVLGLPSLRIKGVYLAIATMAFQFLALWVFNNWEPVTGGIRGRNLPPA 172 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 R+ ++Y++L L T AW +RD Sbjct: 173 EVLGLELDRAER---------------LWYLVLAFAVPLFFYGKRLLATRAGRAWFAVRD 217 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N + + AKLSAFA+S+ + G+AG A ++P+ F F ++ +++VI+ Sbjct: 218 NDLSAQVAGVNLTLAKLSAFALSAFYAGIAGGLLANLYRSVTPEYFLFGISVQYLAMVIV 277 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ ++ + EL + + + + L +++ Sbjct: 278 GGAGTVLGAVLGAVFVMLIPELLNAVVGAFGPEYAAL---LAAWRNVVFGGLILLFLILE 334 Query: 336 SHSLLRL 342 L+ L Sbjct: 335 PLGLVGL 341 >gi|317046828|ref|YP_004114476.1| urea ABC transporter permease UrtB [Pantoea sp. At-9b] gi|316948445|gb|ADU67920.1| urea ABC transporter, permease protein UrtB [Pantoea sp. At-9b] Length = 521 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 86/288 (29%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ S + + +++ ++ Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWLVQSLFQQFAPQWLAWYPLLALPVAFLVTAVMGMV 307 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L W + + L + + + Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNLEVANPNWLSGGMQVLPNL 365 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V++ + + L L +T + + R + N+ + AF + Sbjct: 366 VLPYNRIAVIVFVFAVLGLTWLLLNKTRLGLSVRAVTQNRAMADCCGVPTGRIDMLAFGL 425 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 426 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFGLGILNKV 483 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L+++ + L I R L + Sbjct: 484 LEPQIGAVLGK-------------ILILVLIVLFIQKRPQGLFAFKGR 518 >gi|89053874|ref|YP_509325.1| inner-membrane translocator [Jannaschia sp. CCS1] gi|88863423|gb|ABD54300.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Jannaschia sp. CCS1] Length = 399 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 125/376 (33%), Gaps = 33/376 (8%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGL 65 + I+ + V P LL F + ++ + +++I+ +FA G +I+ G G Sbjct: 9 ARLYLIVIGMLVFAPFLLNPFPETSGLAQFNAGYPDLMQKLVIFGIFAVGYNILFGLTGY 68 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LS IG+++ V + +++ + ++ +++G +++G SL+ G Y +I Sbjct: 69 LSFGHAAFLGIGSFAGVWVMKLLTMNVIPALIIAMLVAGVFALVIGFVSLRRSGIYFSIL 128 Query: 126 TLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRF 169 TL +++ ++ P G + + + Sbjct: 129 TLAFAQMCYSLAYSVLTPITGGETGLTLSLDDPRILGVSQTESGNIPVPHLFGLDMASAT 188 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 ++ YY + + + L R+ R I+ NQ Sbjct: 189 TIDVGAWNFTFSAGYYFAALIMAFAFYFSIRLFRSPFGLMLRAIKSNQTRMSYTGLNPRP 248 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 L+AF +S + G+AG A + ++ + V+ + ILGG +L Sbjct: 249 YTLAAFVISGMYAGLAGGLMVAMDPLAGSERMLWTASGEVVLMTILGGAGTLIGPILGAG 308 Query: 290 ILIGVVELCCGMNFYYFNSLLK-------------FDCSFNMRHTTLMVIALFLVILMRS 336 ++ + + + + + + LV++ Sbjct: 309 VIAYLESIISTIGSTVLYNWFSGLPDGIANVLVNVIYPFVGSGWHLTLGLVFMLVVIFLP 368 Query: 337 HSLL-RLRTPSNFLER 351 ++ + R Sbjct: 369 GGIVEGGKRIGGLFRR 384 >gi|322373955|ref|ZP_08048490.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. C150] gi|321277327|gb|EFX54397.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. C150] Length = 316 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 76/337 (22%), Positives = 137/337 (40%), Gaps = 42/337 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + I L + L+L + Y + + I I ++ G ++V+G G +L Sbjct: 6 KVNLIWFGLIIGLFLILKGLELSGIMNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAYS I+ +L + V +I+ +I GLP+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYSSAIITGMMPTYDGFYLSMVVGVIIAAVVALIFGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M+EI + I++ +TNG AG+ V+ Sbjct: 126 GMAEIIRIIIVNGGELTNGAAGLTGILPYTSWP-------------------------VI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++L R+A T+R+++ A S+ + K+ F + + +AG+ Sbjct: 161 YFFVVIITILVLNFLRSATGRQAITLREDEIAAESMGVNVTKMKVLIFVIGAMISAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + + P F ++I + I +LGG+ S++ A +L + + Sbjct: 221 LYVSYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTVIAAIVLGIINMFLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + +AL LV+L R LL + Sbjct: 275 ---------SNLRMIIYALALILVMLFRPSGLLGTKE 302 >gi|308181636|ref|YP_003925764.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308047127|gb|ADN99670.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 320 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 74/339 (21%), Positives = 137/339 (40%), Gaps = 43/339 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + V+ +++ +I++M + I I V+ A GL++++G G SL Sbjct: 6 KTNMAWLGVMVIGFVVIDGLELMGVINSFIENMLVTIGINVILAVGLNLIIGFAGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ +L + V +I+ +I+G+P+L+ RGDYLAIAT+ Sbjct: 66 HAGFMAIGAYATGIMTQTMATPAGFYLSMIVGMVIAMVAAVIVGIPTLRLRGDYLAIATM 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EI + ++ K F I + + + Sbjct: 126 GAAEIIRILINNLKITNGAA--------------------------GLFNIPALVSWATV 159 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + L+ I + + A +RD++ A ++ KL+AF +A + G+ Sbjct: 160 YVLMCLTTIITVNFIHSRGGRAVMAVRDDELAAGAMGINTTRWKLAAFVFGAATAAIGGS 219 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I+P F +I ++ IV+LGG+ S++ A +L + + Sbjct: 220 LHAAYIQTIAPGDFNIMASIAILIIVVLGGVGSITGTFVAAIVLGALDTILQNF------ 273 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + +AL L++L + LL S Sbjct: 274 ---------GTIRMIIYSLALILIMLFKPAGLLGTWEFS 303 >gi|92118311|ref|YP_578040.1| ABC transporter related [Nitrobacter hamburgensis X14] gi|91801205|gb|ABE63580.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Nitrobacter hamburgensis X14] Length = 625 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 109/300 (36%), Gaps = 12/300 (4%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K ++ L+L F+ + + +IL++ +F G I+ G GLLS Sbjct: 3 KQRPLVIETLTALGLILAPFILPHLG--FAPNTINRILVWGLFGIGFDILFGFTGLLSFG 60 Query: 70 CVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 Y G + +L + + + + S A G ++GL +L+ G Y A+ T+ Sbjct: 61 QSAFYGTGGFVAAYLLTQAGFPHVVTSLFIGMIASAAVGYLVGLIALRRTGIYFAMITVA 120 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 ++E+F + G + +Y L Sbjct: 121 IAEVFFFVEFNPLADWTGGENGLPGVPTPHFDLGFADFQFNTSWS---------LYVFLA 171 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 FL + L + R+ + R +R+N ++ I KL+AF +++A+ G AG Sbjct: 172 FWYFLGIVVGLRIVRSPVGTILRAVRENPMRASAVGHNIHSYKLTAFVIAAAYAGFAGGL 231 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + + PD F F + ++ + +GG +L + + + + Sbjct: 232 LGVMQAFMPPDAFMFHTSAELVMMTAIGGTGTLFGTLVGAGVWLFLQDFLQAALGLGAAW 291 >gi|297566830|ref|YP_003685802.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] gi|296851279|gb|ADH64294.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] Length = 356 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 70/307 (22%), Positives = 131/307 (42%), Gaps = 20/307 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y + QILI + GL ++VG G +SL +GAY L Sbjct: 55 PQYPLFVLTQILIAALAGLGLHLLVGGAGQISLGQAAFVGVGAYVSSHLSGNLA---PFG 111 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + +++ A G+++G+PSL+ +G YLAI TL + I +WK T G AG Sbjct: 112 ILMGGVMAAAIGVVLGVPSLRIKGAYLAIGTLAFQFLADYIFRQWKGFTGGVAG------ 165 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 R+L F + + ++Y+ L L T AW +RD Sbjct: 166 --------RTLPADNSFLGLPLTDDRVVFYLSLLFALPLFFYAKRLLSTRAGRAWFAVRD 217 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N + ++ AKL+AFA+S+ + G+AG ++P+ F + +I ++IVI+ Sbjct: 218 NDLSAQLSGVDLVRAKLTAFALSAFYAGVAGGILMHLIGTVAPENFTLAFSIQYLAIVIV 277 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ + ++ + E+ + + + + + + + + +++ Sbjct: 278 GGAGTVLGAVLGSFFVVLIPEILSVIAGSFGPQYVA---QLSAWRSVAFGVLILVFLILE 334 Query: 336 SHSLLRL 342 L+ L Sbjct: 335 PRGLVGL 341 >gi|264680459|ref|YP_003280369.1| membrane protein [Comamonas testosteroni CNB-2] gi|299532980|ref|ZP_07046367.1| membrane protein [Comamonas testosteroni S44] gi|262210975|gb|ACY35073.1| Integral membrane protein [Comamonas testosteroni CNB-2] gi|298719204|gb|EFI60174.1| membrane protein [Comamonas testosteroni S44] Length = 354 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 72/327 (22%), Positives = 136/327 (41%), Gaps = 17/327 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ FL + S ++ I +I + A GL+I+VG G +SL A+G Sbjct: 28 VILLVLAFAFLAIPFIASDYTFQAILIPFVIMSLAALGLNILVGYCGQISLGTAAFMAVG 87 Query: 78 AYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY+ + G+ + + + +++ A G++ GLPSL+ RG YLA+ATL + Sbjct: 88 AYAAYNLQARIEGMPLLVALLGGGVVAMAFGVVFGLPSLRIRGLYLAVATLAAQFFVDWL 147 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + +TN + V+ + + Y + L + L Sbjct: 148 ATRAAWVTNNSSSGSVSAKPLAILGWAIDTPMEK-------------YLLCLAILCLLGL 194 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDR 255 L R+++ W +RD A + +AKLSAFAVSS +G+AGA + Sbjct: 195 AAKNLVRSSVGREWMAMRDMDVAAAVIGIRPTYAKLSAFAVSSFIVGVAGALWGFVHLGA 254 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P F ++ ++ ++I+GG+ S+ A + + L + ++ L + Sbjct: 255 WEPAAFSLDRSLQLLFMIIIGGLGSVVGSIFGAAFFVLLPLLLNQV--PHWLGLPLSTAT 312 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + + +++ H L +L Sbjct: 313 ATYLEHMIFGALIVFFLIVEPHGLAKL 339 >gi|300768674|ref|ZP_07078571.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300493766|gb|EFK28937.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 320 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 74/339 (21%), Positives = 137/339 (40%), Gaps = 43/339 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + V+ +++ +I++M + I I V+ A GL++++G G SL Sbjct: 6 KTNMAWLGVMVIGFVVIDGLELMGVINSFIENMLVTIGINVILAVGLNLIIGFAGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+ +L + V +I+ +I+G+P+L+ RGDYLAIAT+ Sbjct: 66 HAGFMAIGAYATGIMTQTMATPAGFYLSMIVGMVIAMVAAVIVGIPTLRLRGDYLAIATM 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EI + ++ K F I + + + Sbjct: 126 GAAEIIRILINNLKITNGAA--------------------------GLFNIPALASWATV 159 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + L+ I + + A +RD++ A ++ KL+AF +A + G+ Sbjct: 160 YVLMCLTTIITVNFIHSRGGRAVMAVRDDELAAGAMGINTTRWKLAAFVFGAATAAIGGS 219 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I+P F +I ++ IV+LGG+ S++ A +L + + Sbjct: 220 LHAAYIQTIAPGDFNIMASIAILIIVVLGGVGSITGTFVAAIVLGALDTILQNF------ 273 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + +AL L++L + LL S Sbjct: 274 ---------GTIRMIIYSLALILIMLFKPAGLLGTWEFS 303 >gi|27378296|ref|NP_769825.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351443|dbj|BAC48450.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 339 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 117/302 (38%), Gaps = 13/302 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + + L K + I+ Y +FA L+++VG GL S + + + Sbjct: 27 VLIALVAFAVLASLPLFTGSKALLDFVIRCSAYGLFATSLNLLVGYTGLTSFGHGMFFGL 86 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAYS+ ++ + GL I + + +I+ ++G ++ + Y A TL + + Sbjct: 87 GAYSFGLIMQKLGLPIPVAFVATLVITALIAAVIGAICVRLKEIYFAFVTLAFQMLIHST 146 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ W T G G +R I F + + +Y + L Sbjct: 147 ILSWASFTGGDQG-------------LRGGIPRPAFLGIDLSNHVHLYVTSCALLVLGLL 193 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + ++ R IRDN L + AKL+ F +++ F M G A Sbjct: 194 AMRQIAQSPFGYTLRMIRDNAARASFLGIDVWRAKLTVFVLAALFAAMGGMVMALFVSGA 253 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ ++ + I I +LGG+++ T +L+ + + Y+ L F Sbjct: 254 YPEFAYWTISGEAIFINMLGGVSTFLGPMVGTVLLLLLNDTVTRYTEYHGIVLGVVILFF 313 Query: 317 NM 318 + Sbjct: 314 AL 315 >gi|327438228|dbj|BAK14593.1| ABC-type branched-chain amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 312 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 145/345 (42%), Gaps = 42/345 (12%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ +K +LA+V ++ L + Q Y +M I + I V+ A L +++G G Sbjct: 1 MKKSKIFWGYAVLALVIYAVVQLLISNGVIQFYYQNMFIAMCINVILAVSLHVIIGVTGQ 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 S+ A+GAY I ++G+ I + A+++ G+++G+PSL+ +GDYLAIA Sbjct: 61 FSIGHAGFLAVGAYISAICTMKFGMPFITAILIGAIVAALAGLLVGIPSLRLKGDYLAIA 120 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL +EI + + + + + + Sbjct: 121 TLGFAEIIRIVFVNTDYVGGAA---------------------------GLQVAHQSTWT 153 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 F++ +I + A +IR+++ A ++ + K+ AFA+ S F G+A Sbjct: 154 YAFFATFITILVISNFTNSRHGRACISIREDEIAADAMGINTTYYKVVAFAIGSFFAGVA 213 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA +A + I P F F ++ ++ V+LGG+ SLS A +L V Sbjct: 214 GAIYAHNYYIIQPTAFGFLKSFDILIFVVLGGLGSLSGSVIAAVLLTFVSTYLQ------ 267 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 F + + L LV+L R LL + + + + Sbjct: 268 ---------DFPETRMIIYSLILILVMLYRPTGLLGSKEITAYFK 303 >gi|188581221|ref|YP_001924666.1| ABC transporter [Methylobacterium populi BJ001] gi|179344719|gb|ACB80131.1| ABC transporter related [Methylobacterium populi BJ001] Length = 827 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 73/330 (22%), Positives = 136/330 (41%), Gaps = 31/330 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + V+ L L + Y + + + V+ GL++++G GL+S Sbjct: 6 RAPAAMPLVILALTLAGLGLVAGTSGYSHFVIALVALTVVAGTGLNVLLGLGGLISFGHA 65 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 YAIGAY+ IL + WL +P ++ +S G + +P+++ RG YLA+ T+ Sbjct: 66 GFYAIGAYTSAILTLKGVS-FWLALPAASGLSALVGAALAVPAMRVRGPYLAMVTIAFGF 124 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + ++ LI+ +T G+ G+ VA G + + ++ + Sbjct: 125 LVEHALIEGGELTGGQNGLVVATGPSLFGLPLAERD---------------LAWLAVIGA 169 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 LS LR + A R +RD A SL + K +AFA+S+A G+AGA Sbjct: 170 GLSLYGFHRLRHARLGQALRAVRDADVAAASLGFDPVRVKTAAFAISAALTGLAGAVLPP 229 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 I+P F F+++I+ + V++GG ++ + + + E G+ Y Sbjct: 230 LMLFIAPSSFPFTQSILFVLAVVVGGAGTVLGPLFGALVTVLLPEALAGLAEY------- 282 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +V+ + L+ Sbjct: 283 --------RLLFFGLTTLVVLWLVPAGLVG 304 >gi|125974325|ref|YP_001038235.1| inner-membrane translocator [Clostridium thermocellum ATCC 27405] gi|256003455|ref|ZP_05428445.1| urea ABC transporter, permease protein UrtC [Clostridium thermocellum DSM 2360] gi|125714550|gb|ABN53042.1| urea ABC transporter membrane protein [Clostridium thermocellum ATCC 27405] gi|255992479|gb|EEU02571.1| urea ABC transporter, permease protein UrtC [Clostridium thermocellum DSM 2360] gi|316941472|gb|ADU75506.1| urea ABC transporter, permease protein UrtC [Clostridium thermocellum DSM 1313] Length = 382 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 117/354 (33%), Gaps = 33/354 (9%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 SIF R++ D I+ LL VV L + ++ + + Y + A G+ ++ G Sbjct: 11 SIFKGRISANDIIITLLFVVLALAPLFL------SDFRTNLLGKFIAYAILALGIDLIWG 64 Query: 62 SLGLLSLNCVIAYAIGAYSYVIL-------------GSRYGLSIWLLIPVSAMISGACGM 108 G+LSL + + +GAY + S G ++ + + Sbjct: 65 YTGILSLGHGVYFGLGAYCMAMYLKLEASNGKLPDFMSWSGQNVLPWFWKPFAYAPVAII 124 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + L + + ++ + + Sbjct: 125 LSVLVPAVLALIIGYLTFKNRIKGVYFSILTQALSIIFVVLFVGQQAYTGGTNGITNFKT 184 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 F FP S ++ +YYV LG L+ W+ ++ + IRD++ Sbjct: 185 IFGFPLSGFSTKVTLYYVALGFLILAFLFCRWIVQSRLGKVLIAIRDSENRARFSGYNPA 244 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 K + +S+ G+AGA F ISP ++ ++ V +GG +L Sbjct: 245 IYKTFVYCISAGLAGLAGALFVPQVGIISPAEMGIVPSVEMVIWVAIGGRGTLVGSVIGA 304 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + + SF + + I+ V++ + L L Sbjct: 305 ILVNSLKSMVSE--------------SFPAVWSYFIGISFIAVVIFMPYGLAGL 344 >gi|187922954|ref|YP_001894596.1| urea ABC transporter permease [Burkholderia phytofirmans PsJN] gi|187714148|gb|ACD15372.1| urea ABC transporter, permease protein UrtB [Burkholderia phytofirmans PsJN] Length = 549 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 80/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + +++ + Sbjct: 275 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRFAPGAFDWYPLLAIPASFVAAGLVGIV 334 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + + + Sbjct: 335 LER--LVLKHLYGRPLETLLTTFGISLILIQATRMLFGAQNVQVVNPAWMSGGVTVLPNL 392 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 393 ILPYNRLAILAFSLIVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 452 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L + + Sbjct: 453 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLISKA 510 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 511 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 548 >gi|303231111|ref|ZP_07317851.1| branched-chain amino acid ABC transporter, permease protein [Veillonella atypica ACS-049-V-Sch6] gi|302514242|gb|EFL56244.1| branched-chain amino acid ABC transporter, permease protein [Veillonella atypica ACS-049-V-Sch6] Length = 336 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 122/309 (39%), Gaps = 19/309 (6%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + + +I + + + G LSL ++GAY +L + L I Sbjct: 3 IFNPYYLQIVMFFIINAILGISIYFTLA-SGQLSLGAAGFMSVGAYVGALLSLKADLPIV 61 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + I V ++ +I+GLP+ + +G YLAIATL E+ + I + +TNG G+ Sbjct: 62 VGILVGGFVAALVAVIIGLPTTRLKGLYLAIATLGFGEVVRVIFLNL-DVTNGALGLSGI 120 Query: 154 DRLYFLGTTVRSLIRFFRFPS--SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + T I + I +LL + + + + + + A+ Sbjct: 121 PSIPQELTNFAYEIDIDGLMGIDAVAWGNIMAIIILLIVLIFIIAFCVRINNSRVGRAFA 180 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 I+ + A + +++ K+ AF + + G+ G +A + I+P F + + + ++ Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 + GG + + IL + E+ ++ Y + L ++ Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285 Query: 332 ILMRSHSLL 340 + +R +L Sbjct: 286 MAVRPDGIL 294 >gi|255261356|ref|ZP_05340698.1| high-affinity branched-chain amino acid transport system permease protein LivM [Thalassiobium sp. R2A62] gi|255103691|gb|EET46365.1| high-affinity branched-chain amino acid transport system permease protein LivM [Thalassiobium sp. R2A62] Length = 356 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 70/340 (20%), Positives = 132/340 (38%), Gaps = 32/340 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------YG 89 Y+ S+ IY +FA GL++ G GL ++ V A+GAY+Y +L + +G Sbjct: 10 YLLSLLTVGGIYAIFALGLNVQWGFAGLFNVGIVGFAAVGAYTYALLTTAESTFHYGGFG 69 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + + + V+ + S ++GL ++ R DYLAIAT+ ++EI + IL +TNG G Sbjct: 70 LPLPVGMFVAMITSALVAAVIGLICIRLRSDYLAIATIGIAEIIKLILKNETDVTNGPRG 129 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSF-------------VIYEIFMYYVLLGMCFLSAS 196 I R + + R + ++ +L ++ Sbjct: 130 INKIPRTWEHFSEERFYSSWPLSWFGTPENWAAFFDGLPNWWWQPCFAGTILLFMYIIYR 189 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ R + IR+N+ A + + ++ AF + +A +G GA FA I Sbjct: 190 MLERARVSPWGRMMTAIRENEPAVRAAGKNVTARRVEAFVIGAAIMGFGGALFAQHLRLI 249 Query: 257 SPDMFK--FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 P +V ++ILGG + ++ + M + + Sbjct: 250 EPTNTFDPAKVTFLVWVMLILGGSGNNRGAMLGAFLIWTIWSASELMISGIIDLVGFVAQ 309 Query: 315 SF---------NMRHTTLMVIALFLVILMRSHSLLRLRTP 345 SF L+ + + +++ +L P Sbjct: 310 SFDTTILETRAGFLRMMLIGVLMQVILQKFPEGILPEVRP 349 >gi|172059857|ref|YP_001807509.1| urea ABC transporter permease protein UrtB [Burkholderia ambifaria MC40-6] gi|171992374|gb|ACB63293.1| urea ABC transporter, permease protein UrtB [Burkholderia ambifaria MC40-6] Length = 539 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 77/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPAAFDWYPLVAVPVSFAAAALVGIV 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L V + Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538 >gi|301060257|ref|ZP_07201124.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] gi|300445769|gb|EFK09667.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] Length = 431 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 106/328 (32%), Gaps = 24/328 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + LL + + Y LI VM L+++ G +G S + A+G Sbjct: 112 VLLHVALLYAVLHAWSDISAYRLLTLKFTLIAVMLTLSLNVINGYMGEFSCSHPGFMALG 171 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ S + L +++ + + L L LA A + + Sbjct: 172 AYA----TSVFTLGLFVNDKIFGEALLPSVLGPFLFPLALIAGGLAAALGALLVAIPSFR 227 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + F V R ++ + +L I Sbjct: 228 TRGDYLAIISLAFMFIVKSLFENLEVVGGPRGMSSQPNWADLPTVFVWTVL-----CVWI 282 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I R+ + A +RD++ A ++ K++ F ++ + G+AG FA I+ Sbjct: 283 INNFVRSTMGKALNAVRDDETAADAMTVNTRRTKMTGFLFAAFWAGVAGGLFAHVLRFIN 342 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F ++++V GG+ S+ L + E + + + Sbjct: 343 PGTFGIQRLAEILAMVYFGGLNSVYGSILGAVSLSLLSEALRPLEILKWIIIPLLLIL-- 400 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345 V++ R L+ R Sbjct: 401 -------------VMIFRPTGLIAFREF 415 >gi|327399165|ref|YP_004340034.1| ABC transporter integral membrane subunit [Hippea maritima DSM 10411] gi|327181794|gb|AEA33975.1| ABC-type transporter, integral membrane subunit [Hippea maritima DSM 10411] Length = 308 Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 74/323 (22%), Positives = 129/323 (39%), Gaps = 29/323 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ + + L +G ++ +M I + GL+I+ G G +SL +GA Sbjct: 6 AIAVFVAVMLLVGVVAKNPFVLNMLSVAAITSIVVIGLNILSGFAGQISLGHAGFVGLGA 65 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y IL ++GLS W+ + ++A I G + + P+LK +G YLA+ATL + EI + Sbjct: 66 YISAILSIKFGLSPWISMFITAFIVGLVSLFVAYPTLKLKGHYLAMATLAIGEIIYMLAN 125 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 IT G G+ L G + +F Y+ + + F A I Sbjct: 126 NLSSITGGHQGLVGIPMLSIGGFVFDNERKF--------------YFFIWVLVFAFAFIA 171 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + +A A +T ++A S K+ AF +S + AG+ FA ISP Sbjct: 172 KNITSSAFGRALKTTNLAEQAALSFGINTHKYKIIAFVISCIYASFAGSLFAFYIGFISP 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F ++I + ++ +GGM S+ L + L + Y+ Sbjct: 232 TSFSLLKSINYVVMMFVGGMGSIFGGLVMAVFLEVIPNLITSLQDYWP------------ 279 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + L ++++ L Sbjct: 280 ---IFNGLLLVVMVMFMPEGLGG 299 >gi|326315642|ref|YP_004233314.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372478|gb|ADX44747.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 372 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 130/318 (40%), Gaps = 16/318 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88 + A + + D++ + L+ + GL+++ G G LSL A+GA++ + + Sbjct: 51 VPALATPYWFDAILLPFLVLSLAGVGLNLLTGYAGQLSLGTAAFMAVGAFAALNLQLRVP 110 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 GL + + + + + A G++ GLPSL+ RG YLA+ATL Q L ++ T Sbjct: 111 GLPLPAGMLLGGLCATAVGLVFGLPSLRLRGFYLAVATLAAQFFVQWALTRFGWFTLDSR 170 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 V +G V Y L + L + L T Sbjct: 171 SGVVDAPALRVGPWVFD-------------TPAARYLFALTVVALLTAAAWRLVSTRTGQ 217 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSENI 267 + +RDN+ A + ++ KL AFAVSS +G+AG +A + P F + Sbjct: 218 HFIAVRDNELAARVIGIPVLRTKLLAFAVSSFIVGVAGVLWAFVYLRTVEPAGFNLDRSF 277 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ IVILGG+ +L A+++ + L + + + M ++ + Sbjct: 278 QILFIVILGGLGTLRGAFLGAALMVALPLLLSRLGGWALGGVFDSGV-LEMVQRIVLGVL 336 Query: 328 LFLVILMRSHSLLRLRTP 345 + ++ L L T Sbjct: 337 IIGFLIAEPEGLAALSTR 354 >gi|116750819|ref|YP_847506.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116699883|gb|ABK19071.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 335 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 127/343 (37%), Gaps = 20/343 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + L L L L + S IQ L++ ++ G + + G G + L Sbjct: 11 RDLPRLDLGIAAAVGLALLVFPFFPFSSFAMSTVIQFLMFSLYGMGWNTIGGYGGQVDLG 70 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 IGAY+ + R+ W+ +PV +I+ A ++G + +G Y AIAT+ Sbjct: 71 LAQYLGIGAYATAVSMIRWNTPFWVSMPVGVLIAIAWCSVIGYSVFRLKGHYFAIATIAT 130 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 S + ++I W+ + + F F + YY++L Sbjct: 131 SLVLKDIFEVWRFV-----------GAARGLEIPATRFSSPDFLHLFFTQDDTYYYIILA 179 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 F+ + W R++ + R+I+DN++ SL + +AK+ +AV+ F+ G+F Sbjct: 180 FFFIGILYVNWFRKSRLGFQLRSIKDNEEVARSLGINVQWAKIKTYAVAVTFVSAVGSFH 239 Query: 250 AASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A I P+ +I++ + +LGG SL ILI + Sbjct: 240 ACYVKNIEPEDTMSLDISILIALMAMLGGAGSLWGPLIGAGILIPLKSYL--------KE 291 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + + + + + + +R Sbjct: 292 WLGARAGLVGIDLVIYGAIIMFISAVEPRGVWGIVERIRRRKR 334 >gi|85702844|ref|ZP_01033948.1| branched amino acid ABC transporter (permease) [Roseovarius sp. 217] gi|85671772|gb|EAQ26629.1| branched amino acid ABC transporter (permease) [Roseovarius sp. 217] Length = 320 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 114/320 (35%), Gaps = 22/320 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + L + + ++I ++ ++ G SL V+ +GAY Sbjct: 1 MFLFGAVALIALPHGLSFSQQEILVFLVINILLVTSYRLLT-LTGEWSLGHVVIMGVGAY 59 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L G+++ + + + + S +++ P + +G Y I + EI + I + Sbjct: 60 ASALLTKELGVAVPVAMFLGGITSALLAVLLSFPLFRMKGFYFLIGSFAAGEIIRLIWKR 119 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ G GI D + S F + YY + ++ Sbjct: 120 FREPFGGVRGISGIDPMPDFSLGFYSFDFFE---------PVSYYYFAGVIVLACLWVLW 170 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + ++ + + + K + + + AFA++S F G+AGA A ++P+ Sbjct: 171 RIEKSPVGLTFHAVHWQDKLAQASGVNLRAYRTLAFAIASGFAGIAGALQAHYVGTVNPN 230 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F + V++ I+GG T+ +L + E+ F Sbjct: 231 SFDIEVMVFVLTWAIVGGTTTFYGPILGCVLLTVINEIVLR------------GMGFEQA 278 Query: 320 HTTLMVIALFLVILMRSHSL 339 + + L IL + L Sbjct: 279 RPLIYGAIMILSILFLPNGL 298 >gi|271964527|ref|YP_003338723.1| inner-membrane translocator [Streptosporangium roseum DSM 43021] gi|270507702|gb|ACZ85980.1| inner-membrane translocator [Streptosporangium roseum DSM 43021] Length = 376 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 128/333 (38%), Gaps = 9/333 (2%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 +K + + +L L+ + + G+ + + A G++++ G+ G LS+ Sbjct: 3 DKPRRSVRILLRSAVLVAAAVAVPFYLEGFWLQAGLFAMSAAVGAIGINLLTGATGQLSM 62 Query: 69 NCVIAYAIGAYSYVILGSRYGLSI-------WLLIPVSAMISGACGMIMGLPSLKFRGDY 121 A GAYSYV S G + + ++ + SG G + + + +G Y Sbjct: 63 GHAFFLAAGAYSYVYFASEPGHGLAGLGLPTPVAAVLAVLTSGVAGGLFSPIAGRLKGAY 122 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L IATL + + Q++L P+T G G V F S + + Sbjct: 123 LGIATLALIFLGQHLLFNAGPVTGGFNGRPVPPMELFGFAFADSPALVVAQVPFGALERL 182 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + + C + + R A TIRD++ A + + + F +SS + Sbjct: 183 WFLGLAALACAALFARGVLTGR--PGRAMNTIRDHEIAAGVMGVPVARYRAGVFVLSSMY 240 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AG A R P+ F ++ ++++++GG+ S++ + + +L Sbjct: 241 GGLAGVLLALVFQRTVPEYFGILLSLDYLAMIVIGGLGSVAGAVIGAVFISLLPQLLTRY 300 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + + ++ +V+++ Sbjct: 301 SDALPLVAEPGSGGVSPAEAARILYGAAVVVIV 333 >gi|33599219|ref|NP_886779.1| putative branched-chain amino acid transport system permease [Bordetella bronchiseptica RB50] gi|33575265|emb|CAE30728.1| putative branched-chain amino acid transport system permease [Bordetella bronchiseptica RB50] Length = 354 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 140/343 (40%), Gaps = 23/343 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + + ++F+ + T S + ++ I LI + A GL+I+VG Sbjct: 18 QIFPIRQDR------IFIALLMAVIFVVVPLTASDYLLRAILIPFLILALAAVGLNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY+ G R+ + I + + G+I G+PSL+ RG Sbjct: 72 YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLVAQILLGGCFATLVGVIFGIPSLRIRGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL ++ ++ + F V Sbjct: 132 YLAVATLAAQFFVDWAFLR-------------IPFFTNYSSSGSVSVPPMTFFGLPVQSA 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y ++LG + + L R AI W IRD A + ++AKLSAFAVSS Sbjct: 179 LEKYLLVLGFVVVFTLLAKNLVRGAIGRQWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +G+AGA + P F + + ++ +VI+GG+ S+ A ++ V Sbjct: 239 IVGVAGALWGYVHLGSWEPLAFDLARSFQLLFMVIIGGLGSILGSFFGAAFIVLVPVALT 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L + + + ++ H L RL Sbjct: 299 NV--PHLLGLSLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339 >gi|116669719|ref|YP_830652.1| inner-membrane translocator [Arthrobacter sp. FB24] gi|116609828|gb|ABK02552.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Arthrobacter sp. FB24] Length = 446 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 99/341 (29%), Gaps = 24/341 (7%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + ++ + + A +++ + + L+ + + GLS++ G+ G Sbjct: 128 KVTFSQTSNLSVIFAFGKGIVVQQQDFGQNLLNRLVAGLSFGLLLALASVGLSLIFGTTG 187 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L + GA + ++ + R + Sbjct: 188 LTNFAHGEMVTFGAVLVFAFNAMSLPFWLAVVLALLGGGLFGYVQDAGLWKPLRRRGTGL 247 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 +++ I + +++ + T + V Sbjct: 248 VPMMIVSIGLALAVRYV-----------IQFYFGGSTQQLPYAQSAEIQIGPVSISPNNL 296 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + L+ + A I L +T + A R + DN + + + + Sbjct: 297 WSLVISAVVIALIGFILLKTRLGKATRAVADNPALAAASGIDVDNVIRIVWVAGGMLASL 356 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G +A R ++ DM +++ + V LGG+ ++ + I+ VEL Sbjct: 357 GGILWAYYRPGVTFDMGSQIL-LLIFAGVTLGGLGTVFGALIGSIIVGIFVELTTVFGLA 415 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + +V+L R +L R Sbjct: 416 ------------ADLKYVGALFIMIVVLLFRPQGILGRRER 444 >gi|328949249|ref|YP_004366586.1| ABC-type transporter, integral membrane subunit [Treponema succinifaciens DSM 2489] gi|328449573|gb|AEB15289.1| ABC-type transporter, integral membrane subunit [Treponema succinifaciens DSM 2489] Length = 296 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 94/306 (30%), Gaps = 21/306 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ IGAY+ + + G + L + + Sbjct: 8 LVNGLSLGSIYALIALGYTMVYGIVKLINFAHGDVMMIGAYTGYFVLTATGPTP-LGLVL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + ++ + + L A + N LI + Sbjct: 67 AFLGAMVVCAVLSIAIERCAYRPLRTAPRL------NSLITAIAVELILQNAMRVLPFVG 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F V V++ L + + T A R + + Sbjct: 121 PNPRQFPTMETKFFTFGSVQISNIQLIVIISSAVLMVILNYIINYTKTGRAMRAVSYDLG 180 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + S G G +A + ++ P M + +LGG+ Sbjct: 181 AASLMGVNVNRTIAITFVIGSVLAGAGGVLYATAYPQVDPFMGYI-PGLKAFVAAVLGGI 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL + + + + L +++L++ Sbjct: 240 GSIPGAMVGGVILGIAETMTKAYISSQYADAISYC-------------ILIVILLVKPAG 286 Query: 339 LLRLRT 344 LL + Sbjct: 287 LLGKKE 292 >gi|293606807|ref|ZP_06689158.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292814811|gb|EFF73941.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 325 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 127/319 (39%), Gaps = 26/319 (8%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 Q Y + +L++ +IV G +SL + +GAY+ +L RYG+S WL Sbjct: 27 DQGYGIRVLTLVLLFAAMGQSWNIVGGLANQISLGHAAFFGLGAYTSTLLLMRYGISPWL 86 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 I + ++ G ++ LP+++ RG Y A+ATL E+ + I W +T G G+ + Sbjct: 87 GIVAAMAVAAVAGALLSLPTMRLRGHYFALATLAFGEVLRAIANTWASVTGGPVGLSIPY 146 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 F +S I YY++LG +++ + + + + R ++ Sbjct: 147 SEGFAQMQFKS--------------SIPYYYLMLGAALITSVVFALISHSRLGYRLRAVK 192 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK--FSENIIVISI 272 N +A + ++ A +S+A +G G +A PD ++ V I Sbjct: 193 ANPQAAEVIGVNTARTRILAAVISAALMGACGTLYAQFIYFFDPDTVFSLVGISVRVALI 252 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 I+GG+ +++ ++I + E+ + + + + L+ Sbjct: 253 CIIGGVGTVAGPLIGALVIIPLEEVFNDWLSGHTAGVSQLAFGLILIAIILI-------- 304 Query: 333 LMRSHSLLRLRTPSNFLER 351 L L T L R Sbjct: 305 --EPRGLSALWTRLRNLTR 321 >gi|323525068|ref|YP_004227221.1| urea ABC transporter permease UrtB [Burkholderia sp. CCGE1001] gi|323382070|gb|ADX54161.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. CCGE1001] Length = 547 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + +++ Sbjct: 273 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRVAPGAFDWYPLVAVPASFAAAALVGIV 332 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 333 IER--LVLKHLYGRPLETLLTTFGISLILIQATRMLFGAQNVQVVNPSWMSGGVTVLPSL 390 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 391 ILPYNRLAILAFSLIVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 450 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L V + Sbjct: 451 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKA 508 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 509 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 546 >gi|115350840|ref|YP_772679.1| inner-membrane translocator [Burkholderia ambifaria AMMD] gi|115280828|gb|ABI86345.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia ambifaria AMMD] Length = 539 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 77/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPTAFDWYPLVAVPVSFAAAALVGIV 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L V + Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538 >gi|260574983|ref|ZP_05842985.1| inner-membrane translocator [Rhodobacter sp. SW2] gi|259022988|gb|EEW26282.1| inner-membrane translocator [Rhodobacter sp. SW2] Length = 397 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 125/368 (33%), Gaps = 35/368 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGAT-------KSQKYIDSMGIQILIYVMFAWGLSIVV 60 L++ D + L+ VV L + L + + + ++Y +FA G +I+ Sbjct: 4 LDRKDTVFMLIVVVIALSAPILLNPWPAASQMAQFNAGYPDLMQRFVVYGIFAIGFNILF 63 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G LS +G+Y+ V + ++I I +S +++G +++G SL+ G Sbjct: 64 GLTGYLSFGHAAFLGVGSYAAVWMFKLLSMNIIPAILLSMVVAGLFALVIGYVSLRRSGI 123 Query: 121 YLAIATLIM-SEIFQNILIKWKPITNGKAG--------------IYVADRLYFLGTTVRS 165 Y +I TL F P+TNG+ G Sbjct: 124 YFSILTLAFAQMSFNMAYSVLTPLTNGETGLQLALDDPRILDAANTTNSLPVTNLFGAEM 183 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 + YYV + ++ + + R+ R ++ NQ+ Sbjct: 184 RSSVTWNVGGWSFDFSVGYYVCAVIMLIAFYTSVRIFRSPFGMMLRAVKSNQQRLNYTGI 243 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 L+AF +S + G+AG AA + +++ + V+ + ILGG +L Sbjct: 244 NSRPYTLAAFVISGMYAGLAGGLLAAMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPF 303 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSF-------------NMRHTTLMVIALFLVI 332 + + +N + + + + LV+ Sbjct: 304 LGAGFIKYCENIFSKINDQILHQWFALLPDWLENTLVTVLHPFIGKGWHLTLGLIFMLVV 363 Query: 333 LMRSHSLL 340 + L+ Sbjct: 364 VFLPGGLV 371 >gi|331697517|ref|YP_004333756.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326952206|gb|AEA25903.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 359 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 121/303 (39%), Gaps = 14/303 (4%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L K + L V +L+ ++ S+ LI++ + G +++ G G +S Sbjct: 4 LGKLLRSTGGLGTVVLVLVASLPLWFIQSSFVLSVATLTLIFMAASLGWNVISGFGGQIS 63 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 I + +GAY+ +L RY L+ ++ + + +++ +++G +L+ RG Y ++AT Sbjct: 64 FGHSIFFGLGAYTTALLQVRYHLNAYVGVVLGVVVAVVLAVLLGAVTLRLRGIYFSLATF 123 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ +F + ++ T G+ G + + ++ Y++ Sbjct: 124 ALTLVFAILTGHYEGFTGGEVG-------------LTLPLLGDAPGQFSFDNKVVFYWIA 170 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + L+ + R+ + R I+ +Q+A + KL A+S+ +AG+ Sbjct: 171 TLLAALAFVATWLVLRSRLGLQLRAIQADQEAAQASGVLAFRVKLVGLAISAVPAALAGS 230 Query: 248 FFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + I PD F + + I +GG L IL+ + +L Y Sbjct: 231 VYMQYVAFIDPDSAFGATVATQIAVIAFVGGAGKLWGPVIGAVILVPLQQLLNSSLSAYP 290 Query: 307 NSL 309 Sbjct: 291 AGF 293 >gi|304396493|ref|ZP_07378374.1| urea ABC transporter, permease protein UrtB [Pantoea sp. aB] gi|304356002|gb|EFM20368.1| urea ABC transporter, permease protein UrtB [Pantoea sp. aB] Length = 521 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 87/288 (30%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ + S + + +++ ++ Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWWVQSLFQQFAPDYLAWYPLLALPVAFMVTAAIGMA 307 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L W + V L S + + Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRVLFGAQNLEVANPSWLSGGLQLLPNL 365 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+L + F+ A L L RT + R + N+ + AF + Sbjct: 366 VLPWNRIAVILFVVFVLALTWLLLNRTRLGMNVRAVTQNRAMAECCGVPTGRVDMLAFGL 425 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 426 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 483 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L+++ + L I R L ++ Sbjct: 484 LEPQIGAVLGK-------------ILILVIIVLFIQKRPQGLFAVKGR 518 >gi|332528970|ref|ZP_08404937.1| urea ABC transporter permease UrtB [Hylemonella gracilis ATCC 19624] gi|332041631|gb|EGI77990.1| urea ABC transporter permease UrtB [Hylemonella gracilis ATCC 19624] Length = 527 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 17/290 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + + Sbjct: 254 ITYGLMGVINMAHGELIMIGAYATYVVQGLFRSYLPGAFDWYLVAAVPVAFLASALVGAA 313 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + + + S + Sbjct: 314 LER--GVIRFLYGRPLETLLATWGISLVLMQAVRSLFGAQNVAVENPAWMSGGWQVLSNL 371 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 ++ + + L + RT + R + N+ + AFA+ Sbjct: 372 TLPYNRLVIIAFAFAVLLGMALLISRTRLGLFVRGVTQNRPIASCMGVNTARVDTYAFAL 431 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A S+ + +V+LGG+ L+ A L V +L Sbjct: 432 GSGVAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVYAALGLGLVNKL 489 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 G +++I + I R + L+ S Sbjct: 490 LEGWQGAVLAK-------------IMVLIFIIAFIQKRPQGIFALKGRSV 526 >gi|228939093|ref|ZP_04101689.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971970|ref|ZP_04132589.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228787741|gb|EEM35701.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820572|gb|EEM66601.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 317 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 128/331 (38%), Gaps = 31/331 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + + I + +IS I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F YYV L + ++ Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + I+ + + Y R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLIGAIAGSGIIESLKYYLSELATEY---------PIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T ++ + +V+L+ L+ +R Sbjct: 274 TIILGLLYIIVLLVFPKGLVGTVKKLKSFKR 304 >gi|134292762|ref|YP_001116498.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134135919|gb|ABO57033.1| amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia vietnamiensis G4] Length = 603 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 33/312 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + Y+ +Y + A L++V G++G +SL IGAY+ +L S G Sbjct: 324 PWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSGLGW 383 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + IP + I+ G ++ P+ + RG Y++IATL + E+ +++ W +T G GI Sbjct: 384 SPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGI 443 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L + Y+ L + + A + + L R+ + Sbjct: 444 TGIAPLPW------------------ASTARAAYWFALAVLVVLALLQVRLLRSHLGRTL 485 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +R++ A + K AFAV G++G A I+ F +I+ + Sbjct: 486 RAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILAL 545 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++VILGG+ ++ LIG+ EL Y + + L L Sbjct: 546 TMVILGGLGNVLGGIVGAVALIGLPELFRWAADY---------------RMLIYGVVLVL 590 Query: 331 VILMRSHSLLRL 342 ++ R LL Sbjct: 591 LVRFRPQGLLGT 602 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 106/309 (34%), Gaps = 25/309 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R+GL + + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFVGWLCLTRFGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 A G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVVAGCAALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLVQLVFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +A + +LR T + A R + Sbjct: 126 PDWHVR-----------IAGATLGALDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G D I P M F + + +++G Sbjct: 175 RDAALQMGVDVDRVNQAVFAIACALGGVSGLLVGMYYDSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280 Query: 337 HSLLRLRTP 345 + L + Sbjct: 281 NGLFSAKRA 289 >gi|307727114|ref|YP_003910327.1| inner-membrane translocator [Burkholderia sp. CCGE1003] gi|307587639|gb|ADN61036.1| inner-membrane translocator [Burkholderia sp. CCGE1003] Length = 648 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 134/305 (43%), Gaps = 33/305 (10%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + ++ILI V+FA L ++G G+ S + +GAY + L + + Sbjct: 344 PYMPVLLVEILIAVLFATSLHFIMGPGGMHSFGHAAYFGLGAYGAALFLKVLNLPMEAAL 403 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ +++ ++ G ++ G YLA+ TL ++I +++ +W +T G GI Sbjct: 404 LLAPLLAVGGALVFGWFCVRLSGVYLAMLTLAFAQIVWSVVFQWDDVTGGSNGI------ 457 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +P+ ++ + YYV L + ++ + + + A R RD+ Sbjct: 458 ------------LGLWPADWLSSPVAFYYVTLFCAVIGVWLLRRMLFSPLGYAMRASRDS 505 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + ++F ++S F G+AG+ +A S+ ISP++ S ++ + +V+LG Sbjct: 506 VLRAEAIGIDVKRVQWASFVIASLFCGLAGSLYAFSKGTISPEVISVSRSVDGLVMVLLG 565 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +L+ A+ + + Y+ L+ A+ L+++ Sbjct: 566 GLQTLAGPIVGAAVFTWLQDTVARQTDYW---------------QALLGFAILLLVIAFP 610 Query: 337 HSLLR 341 ++ Sbjct: 611 QGIVG 615 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 94/307 (30%), Gaps = 18/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + + A GLS++ G +++ Y G AYS + WL Sbjct: 9 LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYIAYSMASRFGQTAGGFWLS 68 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +A++ G ++ + L+ + L+ + I G ++ Sbjct: 69 VLAAALVVAVLGALVEVVVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPQDLFGPRA 128 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +++ + + L RT R Sbjct: 129 P----------HLAGAVNFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + F V + G+ GA +V++ Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A I+ + LC G+ ++ S + + + +V+++R Sbjct: 237 GGMGSIPGAFVAALIIAEIKALCIGLGH---VTIFGVGLSLSRFTLVAEFVVMAVVLVVR 293 Query: 336 SHSLLRL 342 LL Sbjct: 294 PWGLLGR 300 >gi|153011320|ref|YP_001372534.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] gi|151563208|gb|ABS16705.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] Length = 337 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 119/310 (38%), Gaps = 14/310 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V + L + + ++ + +I+I+ + A L+ ++G L+S IGA Sbjct: 32 LVFAAFAIVPLLASVLNDSFLLVIVTRIMIFALAALSLNFIMGYGALVSFGHAAYIGIGA 91 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL S + L + + +++ ++ G SL+ G Y + TL ++ ++ Sbjct: 92 YAVGILSSYGIDDLILQLVAAIVVAAFFALVTGYISLRTSGVYFIMITLAFGQMAFFFMV 151 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G G+ ++ R G + + + ++Y +L + + I Sbjct: 152 SLSAF-GGDDGMTLSTRSTLFGNML-------------LSSNLVLFYFVLAVLMGAFFIF 197 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + R RDN ++ + +L+A+ ++ +AG A +SP Sbjct: 198 RMLVHSRFGRVLRGTRDNPVRMRAIGFSPFSFQLTAYVIAGVAAAIAGVLLANQIQFVSP 257 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + +I +V+LGGM +L I + E+ + ++ L F + Sbjct: 258 AFMSWQRSGELIVMVVLGGMGTLIGPVLGATAFIVLEEVLAHFSEHWKLGLGLFLVLVVL 317 Query: 319 RHTTLMVIAL 328 + L Sbjct: 318 FSRDGIGGLL 327 >gi|303229519|ref|ZP_07316307.1| branched-chain amino acid ABC transporter, permease protein [Veillonella atypica ACS-134-V-Col7a] gi|302515644|gb|EFL57598.1| branched-chain amino acid ABC transporter, permease protein [Veillonella atypica ACS-134-V-Col7a] Length = 336 Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 122/309 (39%), Gaps = 19/309 (6%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y + + +I + + + G LSL ++GAY +L + L I Sbjct: 3 IFNPYYLQIVMFFIINAILGISIYFTLA-SGQLSLGAAGFMSVGAYVGALLSLKADLPIV 61 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + I V ++ +I+GLP+ + +G YLAIATL E+ + I + +TNG G+ Sbjct: 62 VGILVGGFVAALVAVIIGLPTTRLKGLYLAIATLGFGEVVRVIFLNL-DVTNGALGLSGI 120 Query: 154 DRLYFLGTTVRSLIRFFRFPS--SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + T I + I +LL + + + + + + A+ Sbjct: 121 PSIPQELTNFAYEIDIDGLMGIDAVAWGNIMAIIILLIVLIFIIAFCVRINNSRVGRAFA 180 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 I+ + A + +++ K+ AF + + G+ G +A + I+P F + + + ++ Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 + GG + + IL + E+ ++ Y + L ++ Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285 Query: 332 ILMRSHSLL 340 + +R +L Sbjct: 286 MAVRPDGIL 294 >gi|182413833|ref|YP_001818899.1| inner-membrane translocator [Opitutus terrae PB90-1] gi|177841047|gb|ACB75299.1| inner-membrane translocator [Opitutus terrae PB90-1] Length = 318 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 109/308 (35%), Gaps = 26/308 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + I + I ++ A L++V G G SL ++GAY + G + Sbjct: 26 DPYHLDVLIGVGINIILAVSLNLVNGYTGQFSLGHAGFMSVGAYLAAAVTLFLGPRLLGE 85 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 G L LA A + ++ ++ + G R Sbjct: 86 D------GGTLWQQSLLFLGALIVGGLAAAFTGLLVGVPSLRLRGDYLALVTLGFGEIIR 139 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 +++ I + +L ++ ++ L + + D Sbjct: 140 -----VVFQNVEVLGGALGLNGIPPYTTIFWVLAFVAITLFVVACLVTSTYGRGFLATHD 194 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A ++ K+ AF V + F G+AG + + I+P F F+++I ++ +VIL Sbjct: 195 DEVAAEAVGLNTTRYKIVAFVVGAFFAGIAGGLYGHFKMTITPTGFDFTKSIEIVVMVIL 254 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM + + A A+L + E+ + Y + L +++L R Sbjct: 255 GGMGNTLGVVLAAALLTLLPEVLRPVAEY---------------RMVIYSFLLIVLMLAR 299 Query: 336 SHSLLRLR 343 L LR Sbjct: 300 PQGLFNLR 307 >gi|114761046|ref|ZP_01440961.1| branched amino acid ABC transporter (permease) [Pelagibaca bermudensis HTCC2601] gi|114545294|gb|EAU48296.1| branched amino acid ABC transporter (permease) [Roseovarius sp. HTCC2601] Length = 327 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 117/328 (35%), Gaps = 31/328 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + + + L L + Y + +L+ V+ G ++ +G+LG L+ + IGA Sbjct: 16 LLFWAVPAVLLLLPLTTNPYTQFIANGMLVSVLVTLGFTLTIGNLGQLAFANTAFFGIGA 75 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGAC-GMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 YS IL ++ G+ L IP++ + R YLAI TL E+ + Sbjct: 76 YSSAILAAKLGVPWLLTIPLAGAFGALGGFLASAAALRGIRTYYLAIITLAFGELMRWAY 135 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + KP+T G G+ + + + +Y+ L + L Sbjct: 136 LHAKPLTGGTDGMPMP---------------RETLLGISLTDDTLKFYIFLAVTVLLVKA 180 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L R+ A +R+N+ A SL L F S +G AGA FA + Sbjct: 181 TLNLMRSHFGRAVMAVRENEIATASLAIPTARVILVTFMWSGFVVGCAGALFARHVGHVF 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F I ++V++GG+ S+ +L + E Sbjct: 241 PESFGMLHLIASFAMVLVGGLGSVLGAVLGAVLLTALPEYLRAF---------------P 285 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + V++ L L Sbjct: 286 GMEELFFGLIVAGVLVAMPMGLASLLRR 313 >gi|49475592|ref|YP_033633.1| high-affinity branched-chain amino acid transporter, permease protein [Bartonella henselae str. Houston-1] gi|49238399|emb|CAF27626.1| High-affinity branched-chain amino acid transporter, permease protein [Bartonella henselae str. Houston-1] Length = 352 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 62/339 (18%), Positives = 115/339 (33%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K + + FLF +Y + I I + A L+++ G G+ S Sbjct: 1 MAKSASTFLSCISILFFIGFLFYADNHFNEYTLRVINLIAINAILAISLNLIYGFTGMFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY IL ++ + I+ + + L A + Sbjct: 61 LGHAGFMAIGAYVCAILLLSPEQK--EMMWILEPIAEPLHDLQLPFFVTVVVSGLCAAVV 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + + + G R+ T + + Y L Sbjct: 119 GLLIALPILRLGGDYLGIATLGFAEIIRIVITNATSVTNGSLGIKGIPQNATLWWNYSWL 178 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++ R+ N R IRD++ A ++ F + +F + F G+ GA Sbjct: 179 VFTVTFIILLL----RSNTGNVLRAIRDDEIAAKTMGINAFFYRSFSFTAGAFFAGVGGA 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I P MF F ++ IV+ GG+ S++ + I+ ++E + + Sbjct: 235 LMAALISTIDPKMFNFLLTFNILMIVVAGGLGSITGSIIGSIIITVMLEWLRIIESPFDL 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + + L ++IL LL R S Sbjct: 295 GFIHIP-ETPGLRMVIFSLLLLVIILFWRRGLLGQREFS 332 >gi|329903086|ref|ZP_08273360.1| Putative ABC transport system, membrane protein [Oxalobacteraceae bacterium IMCC9480] gi|327548495|gb|EGF33164.1| Putative ABC transport system, membrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 313 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 117/324 (36%), Gaps = 29/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + L L Y ++ Q+LI +FA L+++VG GL SL + Sbjct: 4 VLLFVFVALLAILPWLAGSDYYTNLASQVLIAALFALSLNLLVGYAGLTSLGHAGFLGLA 63 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS L + S + GL +L+ G + TL + +I I Sbjct: 64 AYSSAWLMLNLQWDHASAAAAALAGSTVVAALFGLIALRASGISFLMITLALGQILWGIA 123 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W +T G G+ R + G + F YY L + L ++ Sbjct: 124 YRWAGVTGGDNGLSGITRPHPFGLDLGPASHF--------------YYFTLLVFLLVWAL 169 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I R+ + R RD + +L + + F VS F +AG + + IS Sbjct: 170 IALWVRSPFGASIRGTRDQPRRMSALGFNVWLIRWITFTVSGFFGAVAGLMYVYYQQFIS 229 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P + + ++ +VI GG +L+ A+++ + + G + Sbjct: 230 PHSLALANSAEMLLMVIAGGPATLAGPVVGAALVVLLKNIASGYIDRW------------ 277 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 L+ ++L + ++ Sbjct: 278 ---IMLLGFVFLFIVLFVPNGIVP 298 >gi|221197324|ref|ZP_03570371.1| inner-membrane translocator [Burkholderia multivorans CGD2M] gi|221203997|ref|ZP_03577015.1| inner-membrane translocator [Burkholderia multivorans CGD2] gi|221176163|gb|EEE08592.1| inner-membrane translocator [Burkholderia multivorans CGD2] gi|221183878|gb|EEE16278.1| inner-membrane translocator [Burkholderia multivorans CGD2M] Length = 603 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 74/324 (22%), Positives = 130/324 (40%), Gaps = 33/324 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V + L L + Y+ +Y + A L++V G++G +SL IGA Sbjct: 312 AIVALVALAAVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L S G S + IP + I+ G ++ P+ + RG Y++IATL + E+ +++ Sbjct: 372 YASALLSSDLGWSPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI L + Y+ L + A + Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------ASTAQAAYWFTLTVLVAFALVQ 473 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L R+ + R +R++ A + K AFAV G++G A I+ Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F +I+ +++VILGG+ ++ LIG+ E+ Y Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIVGALALIGLPEMFRWAADY-------------- 579 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + L L++ R LL Sbjct: 580 -RMLIYGLVLLLLVRFRPQGLLGT 602 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 106/305 (34%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R+GL + + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVVVGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + +A + +LR T + A R + Sbjct: 126 PDWH-----------LRLGGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280 Query: 337 HSLLR 341 + L Sbjct: 281 NGLFS 285 >gi|26991523|ref|NP_746948.1| branched-chain amino acid ABC transporter, permease protein, putative [Pseudomonas putida KT2440] gi|24986606|gb|AAN70412.1|AE016683_3 branched-chain amino acid ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 359 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 99/330 (30%), Gaps = 27/330 (8%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L A Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 37 LLPADHALHVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYL 96 Query: 86 S----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 W +P + + L L L + Sbjct: 97 MRQAAGDGLPGFMTFLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKG 156 Query: 136 ILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + AG+ + R + S F + ++ + + + Sbjct: 157 VYFSIMTQALTFAGMLLFFRNETGFGGNNGFTSFRTILGFDIAAQGTRAVLFLLTVALLL 216 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S + L R+ +RD + KL + +S+ G+AGA + Sbjct: 217 ASLYLCWRLTRSKFGRLLTAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQ 276 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P + +I V LGG +L ++ G+ F Sbjct: 277 VGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------F 322 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F + LV L ++ L Sbjct: 323 TVAFPEFWLFFLGALFILVTLYLPKGVVGL 352 >gi|221064926|ref|ZP_03541031.1| inner-membrane translocator [Comamonas testosteroni KF-1] gi|220709949|gb|EED65317.1| inner-membrane translocator [Comamonas testosteroni KF-1] Length = 354 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 135/327 (41%), Gaps = 17/327 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ FL + S ++ I +I + A GL+I+VG G +SL A+G Sbjct: 28 VILLILAFAFLAIPFIASDYTFQAILIPFVIMSLAALGLNILVGYCGQISLGTAAFMAVG 87 Query: 78 AYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY+ + G+ + + + +++ G++ GLPSL+ RG YLA+ATL + Sbjct: 88 AYAAYNLQARIEGMPLLVALIGGGLVAMVFGVVFGLPSLRIRGLYLAVATLAAQFFVDWL 147 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + +TN + V+ + + Y + L + L Sbjct: 148 ATRAAWVTNNSSSGSVSAKPLAILGWAIDTPMEK-------------YLLCLAILCLLGL 194 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDR 255 L R+++ W +RD A + +AKLSAFAVSS +G+AGA + Sbjct: 195 AAKNLVRSSVGREWMAMRDMDVAAAVIGIRPTYAKLSAFAVSSFIVGVAGALWGFVHLGA 254 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P F ++ ++ ++I+GG+ S+ A + + L + ++ L + Sbjct: 255 WEPAAFSLDRSLQLLFMIIIGGLGSVVGSIFGAAFFVLLPLLLNQV--PHWLGLPLSTAT 312 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + + +++ H L +L Sbjct: 313 ATYLEHMIFGALIVFFLIVEPHGLAKL 339 >gi|239983434|ref|ZP_04705958.1| putative D-ribose ABC transporter substrate-binding/permease protein [Streptomyces albus J1074] gi|291455257|ref|ZP_06594647.1| D-ribose ABC transporter permease [Streptomyces albus J1074] gi|291358206|gb|EFE85108.1| D-ribose ABC transporter permease [Streptomyces albus J1074] Length = 653 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 105/311 (33%), Gaps = 29/311 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 VV + + + G + + ++G+Q + + A+G++ V+ S G + L+ A+ Sbjct: 32 ALVVLVVAMSVLSGDFLTTDNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 90 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 A L + G+ + + + ++A ACG++ G + ++ Sbjct: 91 ATVLAWLATSEGVPVVIAVLLAAATGLACGLVNGALISYGKLPPFIATLAML-------- 142 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + L + + + ++ +L M + Sbjct: 143 -------------SIGRGLSLVISQGSPIAFPDSVSKLGDTLGGWLPVPVLVMIVMGLIT 189 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L LRRT I + I N++A + KL +A+S F +AG A+ Sbjct: 190 ALLLRRTYIGRSMYAIGGNEEAARLSGIRVKRQKLVIYALSGLFAAVAGVVLASRLSSAQ 249 Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 P + + I+ V++ GG+ S IL + ++ F + Sbjct: 250 PQAAQ-GYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQVV 308 Query: 312 FDCSFNMRHTT 322 + Sbjct: 309 IGVVIALAVLL 319 >gi|134102110|ref|YP_001107771.1| putative D-ribose ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|291007638|ref|ZP_06565611.1| putative D-ribose ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133914733|emb|CAM04846.1| putative D-ribose ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 644 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 96/297 (32%), Gaps = 26/297 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + ++G+Q + + A+G++ V+ G + L+ + + GL Sbjct: 38 PDFLTANNLLNVGVQASVVAVLAFGMTFVI-VSGGIDLSVGSVAGLSGIVTGWAVAGAGL 96 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 +WL IPV A G++ G+ R ATL M + + + + Sbjct: 97 PLWLAIPVGLAAGAAAGLLSGVLITAGRVPPFI-ATLAMLSVARGLALVLADGR------ 149 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + F+ Y +L M + LRRT A Sbjct: 150 -------------PISLDGWLAELGSGELFGFLPYPVLVMLAIGLLTAFVLRRTYAGRAM 196 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 I N +A + KL +A+S F +AG AA P+ E + Sbjct: 197 YAIGGNAEAARLSGIKVSRQKLLIYALSGLFAAVAGILLAARLASAQPEAGSGYELDAIA 256 Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 ++VI GG+ S +L + ++ F + + Sbjct: 257 AVVIGGASLAGGVGSALGTFVGALVLAVLRNGLNLLDVSAFWQQVAIGAVIAVAVLF 313 >gi|94501625|ref|ZP_01308141.1| ABC-type branched-chain amino acid transport system, permease component [Oceanobacter sp. RED65] gi|94426201|gb|EAT11193.1| ABC-type branched-chain amino acid transport system, permease component [Oceanobacter sp. RED65] Length = 401 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 105/340 (30%), Gaps = 21/340 (6%) Query: 9 NKYDKILCLLAVVYPL--LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + L V++P L+F A Y ++ + L Y + A + ++ G G+L Sbjct: 29 QRLLLAILALIVIFPFCNLVFEPGSALHVSTYTLTLTGKYLCYALLALAVDLIWGYCGIL 88 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 SL +A+G Y+ + R + LP F D A Sbjct: 89 SLGHGAFFALGGYAMGMYLMRQIGDRGVYGNPELPDFMVFLNWNELPWYWFGFDQFWFAM 148 Query: 127 LIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLI 167 +++ + + + + + D + + Sbjct: 149 IMVLLVPGTLAFVFGWLAFRSRVTGVYLSIITQALTYALMLAFFRNDMGFGGNNGLTDFK 208 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 F ++ I ++ ++ + +IRD + L + Sbjct: 209 DILGFDLQSDGTRSALFIASGLALIFGYLISKFITKSKLGRVLVSIRDAEMRTRFLGYKV 268 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + KL F VS+ G+AGA + I+P F +I +I V +GG +L A Sbjct: 269 EYYKLFVFVVSAMLAGIAGALYVPQVGIINPGEFSPINSIEIIIWVAVGGRGTLFGAALG 328 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + G + LL + ++ Sbjct: 329 AIAVNYAKTYFTGAFAELWLFLLGGLFVMTTLYLPKGIVG 368 >gi|83719719|ref|YP_441341.1| branched-chain amino acid ABC transporter permease [Burkholderia thailandensis E264] gi|167582957|ref|ZP_02375831.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|167618191|ref|ZP_02386822.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257139985|ref|ZP_05588247.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83653544|gb|ABC37607.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 316 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 100/310 (32%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ +GA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPELGHV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + +I+ +G + L A + I + Sbjct: 68 ATLTIGLVIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIQAGANNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ + M F + + Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|94312907|ref|YP_586116.1| ABC transporter permease [Cupriavidus metallidurans CH34] gi|93356759|gb|ABF10847.1| ABC-type uncharacterized transport system, permease component [Cupriavidus metallidurans CH34] Length = 342 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 120/324 (37%), Gaps = 28/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + Y ++ I + GL+++ G G L+L AIG Sbjct: 8 IGWTLLFVAAIVFPLAVPNSYYLTVMTLAFIMAIATLGLNLLTGYTGQLNLAHGGFMAIG 67 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL + + WL +S ++ G ++G SL+ +G Y +I T+ + I ++ Sbjct: 68 AYTLGILTVDHQMPYWLAFALSGVVCMVLGYVVGTVSLRLKGHYFSIFTMCVGYIIYLLI 127 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G+ +G ++ YY++L L + Sbjct: 128 EKWESLTHGAVGLIGIPVPASIGPIAFDSVQAQ-------------YYLVLVFLALGTFV 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + + ++ +R++ +L ++ K+ +F +S + G AGA +A + Sbjct: 175 MHRIVSSLVGRSFMAVRNSDALAEALGINLMRTKVLSFVLSVGYAGFAGALYAGQVRFLG 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD+ + ++ + + L + + + Sbjct: 235 PDIARTDITFDMVMAM---------------LVGGTGTLLGPLLGSLLVPWVTQTLQFLQ 279 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + L L+I+ ++ Sbjct: 280 DYRMLVFGPVLILLIIFVPDGIVG 303 >gi|254514850|ref|ZP_05126911.1| inner-membrane translocator [gamma proteobacterium NOR5-3] gi|219677093|gb|EED33458.1| inner-membrane translocator [gamma proteobacterium NOR5-3] Length = 529 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 85/290 (29%), Gaps = 21/290 (7%) Query: 53 AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112 A GL+I G +G++++ +GAY+ +L + + ++ + +GL Sbjct: 254 AVGLAITFGVMGVINMAHGELIMLGAYTTWVLQQMLPGQPGIALLLAIPAAFLVSAAVGL 313 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 + +L L + +L + + + + Sbjct: 314 VIERGVIRFLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVLTPEWLSGAWE 367 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + + +L+ + A ++ +R T + R + N+ +L Sbjct: 368 VTQGLSLTYNRMAILVFSLMVFAGLLALMRYTRLGLQVRAVAQNRAMARALGVRSARVDA 427 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 FA+ S G+AG + + + I +V+ GG+ +L A L Sbjct: 428 LTFALGSGVAGVAGVALSQLTNV--GPNLGQAYIIDSFLVVVFGGVGNLWGTLVAAFSLG 485 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ +L R L Sbjct: 486 VANKVLEPATGAVLAKILLLVALILFLQR-------------RPQGLFPR 522 >gi|229816640|ref|ZP_04446929.1| hypothetical protein COLINT_03689 [Collinsella intestinalis DSM 13280] gi|229807768|gb|EEP43581.1| hypothetical protein COLINT_03689 [Collinsella intestinalis DSM 13280] Length = 360 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 141/340 (41%), Gaps = 27/340 (7%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + D + V+ L+ + + I + I Y++ A L++VVG G L Sbjct: 8 KKTRRDLATYAMVVLAFALITVMKSNGMIPRMIVGQLVPICSYIVMAISLNLVVGVAGDL 67 Query: 67 SLNCVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL ++GAYS ++ + + + + V A + G ++G+P L+ G Sbjct: 68 SLGHAGFMSVGAYSGIVAAMSLSEAIPSDTVRLVIALVVGAASAALAGFLIGIPVLRLSG 127 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR-----LYFLGTTVRSLIRFFRFPS 174 DYLAI TL EI + ++ + + + + LG T Sbjct: 128 DYLAIVTLAFGEIIKEVVTCLIVGVDEHGLHVLFNLTGKLTVDDLGLTETGTAIIKGAQG 187 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + I ++ + ++ ++L L R+ A +RDN+ A S+ + ++ A Sbjct: 188 ASGTEMISTFFAGFVLIMVALVVVLNLVRSRTGRAILAVRDNRIAAESVGISTTKYRMIA 247 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F VS+A G AGA F S ++S F F+ +I+++ V+LGG+ ++ A +L + Sbjct: 248 FVVSAALAGAAGALFGNSFSQLSATKFDFNMSILILVFVVLGGLGNMRGSILAATVLTIL 307 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 E + Y + I L LV+++ Sbjct: 308 PEALRQFSDY---------------RMLVYAIVLILVMIV 332 >gi|39997105|ref|NP_953056.1| branched-chain amino acid ABC transporter permease [Geobacter sulfurreducens PCA] gi|39983995|gb|AAR35383.1| branched-chain amino acid ABC transporter, permease protein [Geobacter sulfurreducens PCA] gi|298506118|gb|ADI84841.1| branched-chain amino acid ABC transporter, membrane protein [Geobacter sulfurreducens KN400] Length = 357 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 133/345 (38%), Gaps = 21/345 (6%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + ++ V L Y + I + + +IV G G S+ Sbjct: 11 TRGASPVSIILGVVILAGLFLFPKAVESPYALHIMILFFLSTIMGESWNIVGGYTGQYSV 70 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + GAY+ ++L + W + ++ +I+G + RG Y +A++ Sbjct: 71 GHAAYFGAGAYTTMVLMQFKQIPPWYGMIAGIAVALVVSLIIGSICFRLRGPYFVLASIA 130 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 ++EI + + K +TNG GI D F + + ++ YY+ L Sbjct: 131 VAEIMRLCAMNLKDLTNGAEGILATDIPPF---------TLGGTVITDFLSKVPFYYIGL 181 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + L+ ++ ++ + + ++ IR++Q A SL + K A A+S+ F +AG+F Sbjct: 182 VIAILTIAVTYLVQHSKLGYYFQAIREDQDAAHSLGINLSIYKNIALAISAVFTSLAGSF 241 Query: 249 FAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC-------- 299 +A I P ++ ++ I I+GG+ ++ + +L+ + E Sbjct: 242 YAIYIGFIDPPTVLALDISVQIVLICIIGGIGTIWGPVVGSLVLVPLSEALRSNLIAQGI 301 Query: 300 ---GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 G+ + H + I + +VIL +L Sbjct: 302 FKIGLASEESGVGIFLKDHLAHAHALIYGILVVVVILFMPDGVLG 346 >gi|330818058|ref|YP_004361763.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327370451|gb|AEA61807.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 316 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 100/310 (32%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 VINGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPELGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + +I+ A +G + L A + I + Sbjct: 68 ATLTIGLVIAAAVCAAVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L +T + + + ++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLSTNPLNVIHPTDTTPGAVISPTEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ + M F + + Sbjct: 188 SENPNNASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + + L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|311742145|ref|ZP_07715955.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311314638|gb|EFQ84545.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 376 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 66/331 (19%), Positives = 134/331 (40%), Gaps = 14/331 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 +++ F + + LI + A GL++V G G +SL +GAY+ Sbjct: 33 LAIVIASFGLPFLLTNDLLLVLTLGLIASVGAIGLNLVTGYAGQVSLGHAFFIGLGAYTG 92 Query: 82 VI-------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + YGL +++ +P + +++ G+++G +++ RG YLAI TL + + Sbjct: 93 AVLGGDPDAAVRGYGLPLYVWLPAAGVVAAIAGLLVGPIAVRLRGLYLAIVTLGLVFLGD 152 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +I + + T G +L G + + S + FM V L + Sbjct: 153 HIFREAREFTGGPGVGRRGPKLEAFGIDFTTTGTYLGVELSREQLQFFMALVFLII---F 209 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + + R+ I A+ +RD A + + K+ AFA+SS + G+ GA + A Sbjct: 210 AVLARNIARSGIGRAFSAVRDRDVAAAVVGVDLTKYKIMAFAMSSFYAGVTGALYYAVVG 269 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV----VELCCGMNFYYFNSLL 310 P+ F +I ++++++GG+ +++ + + E+ M F S Sbjct: 270 VFEPNTFGLLLSIQYLAMILIGGVATITGSIMGALFVTSLGRISGEIASFMPFISTTSGS 329 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + + ++ L Sbjct: 330 SGLLTVFQLEAILYGLLIVGFLIFEPRGLFG 360 >gi|319765017|ref|YP_004128954.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330827212|ref|YP_004390515.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317119578|gb|ADV02067.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329312584|gb|AEB86999.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 331 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 128/298 (42%), Gaps = 18/298 (6%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 ++++ +L LA+V + LF+ G S+ ++LIY + A G ++++G GLLS Sbjct: 1 MSRHSHLLLALAIVVAMPLFMHSG---------SLASEVLIYALAAMGCNLLLGYTGLLS 51 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 I + +G+Y+ +L +R+ L + L + + + A ++G +++ RG Y + TL Sbjct: 52 FGQGIFFGLGSYTIALLLTRWPLPMPLALLAAITMGAAGAAVVGWIAIRQRGTYFVMLTL 111 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +++F I +T G G+ R + + Y + Sbjct: 112 AFAQMFYFIAYSLPGLTGGDNGLLDIPRPS---------LAVAGHTLWPLASPWQYYGFV 162 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++ ++ + + +RDN++ ++ + KL AF +S A G+AGA Sbjct: 163 AALFLVAFWLLRRVCDSVFGRTLLAVRDNEERAAAVGYDLRLLKLQAFVISGAVTGLAGA 222 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 A ++ + ++I + ++GG +L A + + + + + Sbjct: 223 LHAMMTGIAPLSNAEYHTSEMIIVMTVIGGTGNLLASVLGAAFYVLLGDWLSTLWPRW 280 >gi|28379418|ref|NP_786310.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|28272257|emb|CAD65168.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus plantarum WCFS1] Length = 320 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 74/339 (21%), Positives = 138/339 (40%), Gaps = 43/339 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + V+ +++ +I++M + I I V+ A GL++++G G SL Sbjct: 6 KTNMAWLGVMVIGFVVIDGLELMGVINSFIENMLVTIGINVILAVGLNLIIGFAGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 V AIGAY+ I+ +L + V +I+ +I+G+P+L+ RGDYLAIAT+ Sbjct: 66 HVGFMAIGAYATGIMTQTMATPAGFYLSMIVGMVIAMVAAVIVGIPTLRLRGDYLAIATM 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EI + ++ K F I + + + Sbjct: 126 GAAEIIRILINNLKITNGAA--------------------------GLFNIPALASWATV 159 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + L+ I + + A +RD++ A ++ KL+AF +A + G+ Sbjct: 160 YVLMCLTTIITVNFIHSRGGRAVMAVRDDELAAGAMGINTTRWKLAAFVFGAATAAIGGS 219 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I+P F +I ++ IV+LGG+ S++ A +L + + Sbjct: 220 LHAAYIQTIAPGDFNIMASIAILIIVVLGGVGSITGTFVAAIVLGALDTILQNF------ 273 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + +AL L+++ + LL S Sbjct: 274 ---------GTIRMIIYSLALILIMIFKPAGLLGTWEFS 303 >gi|296268410|ref|YP_003651042.1| inner-membrane translocator [Thermobispora bispora DSM 43833] gi|296091197|gb|ADG87149.1| inner-membrane translocator [Thermobispora bispora DSM 43833] Length = 352 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 112/321 (34%), Gaps = 20/321 (6%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 + L + + + + A ++ G GLLS + A+G Y+ I+ Sbjct: 46 VPLLFDGPLGSPGVLHVLSLMCVMAAVAVTYDLLFGFTGLLSFGHGLYVALGMYTTGIVL 105 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + L + A++ +++G L+ G A+ATL + +++ Sbjct: 106 THTDLGFAGAVAWVAVLGLVVPLVLGAICLRVGGIAFAMATLAFGQAGAIFVVR------ 159 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 R+ + P VI Y++ L + ++ +++ W + Sbjct: 160 ------DPLRITGGELGLALPYEKLPEPLVGVINAGNRYWLALALLVVTYAVVRWALASR 213 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 WR IRDN+ L KL AF +SS +AG +A ++ + + Sbjct: 214 PGRVWRAIRDNETRVLVLGLRPYAFKLMAFVLSSFLASLAGLVYALIAGGAHAEVTEATF 273 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + ++ +V+LGG + + ++ L + ++ Sbjct: 274 TLGLLVMVVLGGSGHPYGALIGGLVYTYLNHRLGQLSTTLGGPLSEP--------LFILG 325 Query: 326 IALFLVILMRSHSLLRLRTPS 346 + ++IL ++ L + Sbjct: 326 VLFVVLILFLPGGIVSLVRRT 346 >gi|6822085|emb|CAB70950.1| putative membrane protein [Nostoc sp. PCC 7120] Length = 373 Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 102/350 (29%), Gaps = 28/350 (8%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ ++ + VV L+ + + ++ ++ + L + A G+ ++ G GL Sbjct: 1 MKKGGRLILIEVGVVVAIALILILIMPLVLSEFRLNLLGRFLSLAIVALGIDLIWGYTGL 60 Query: 66 LSLNCVIAYAIGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMG 111 LSL I + +G Y+ + + +L + Sbjct: 61 LSLGHGIFFGLGGYAIAMYLKLLKSQRVSYLISWNCMVSRNFLGFGGPFYSFPIAVAAVV 120 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + G + + ++ I + + + F Sbjct: 121 IIPGLLAGLLGYLVFRNRIKGVYFSILTQAAIIVFFNFFNGQQQFFNGTNGLIDFTTLFG 180 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 S + Y + + + I WL IRD++ K Sbjct: 181 ATVSDPKTKFIFYTLTVLFLAATYGICRWLTSGRFGRLLIAIRDDESRVRFSGYDPTDFK 240 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 FAVS A G+AGAF+ +SP + +I ++ V +GG +L T ++ Sbjct: 241 TLVFAVSGAIAGIAGAFYTLQSGSVSPRAMDIAFSIEMVIWVAVGGRATLIGAVLGTLLV 300 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +V+ + L+ Sbjct: 301 NYARAFLSE--------------QFAEIWLFFQGALFLIVVTVLPDGLVG 336 >gi|86750999|ref|YP_487495.1| ABC transporter ATPase component [Rhodopseudomonas palustris HaA2] gi|86574027|gb|ABD08584.1| ABC transporter ATPase component [Rhodopseudomonas palustris HaA2] Length = 954 Score = 93.0 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 113/306 (36%), Gaps = 22/306 (7%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y ++ + + + GL ++ G GL S IGAY + S YGLS WL Sbjct: 389 SNYEIALLNYVGLAAIVVLGLVLLTGVAGLTSFAQAAYVGIGAYITGYVSSVYGLSPWLT 448 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P++ ++ + L + + G YL +ATL ++ + + T G+AG+ Sbjct: 449 LPMALAVAFVLALFGSLITARLSGHYLPLATLSLAVVAYYLFAALPQ-TGGQAGMTNIPP 507 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L ++ Y + G L + L + A R ++ Sbjct: 508 LT--------------ILGIAIVSPKAWYVGIWGALLLLQLAMANLLDSRPGRAIRALKS 553 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 SL AK++AF ++ +AG F+A + ++P F F++ I + + ++ Sbjct: 554 GTIMAESLGVDTWRAKIAAFVIACLLAALAGWFYAHYQRFLNPSPFSFNQGIEYLFMAVI 613 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG S+ + I++ + F + +A ++ + Sbjct: 614 GGAGSIGGALVGSGIVVLANQWLQTNLPLVLGMQGDF-------QVIIFGVAAMAMLQLL 666 Query: 336 SHSLLR 341 + Sbjct: 667 PRGIWP 672 >gi|322517392|ref|ZP_08070266.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus vestibularis ATCC 49124] gi|322123990|gb|EFX95546.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus vestibularis ATCC 49124] Length = 316 Score = 93.0 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 75/337 (22%), Positives = 137/337 (40%), Gaps = 42/337 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + I L + L+L + Y + + I I ++ G ++V+G G +L Sbjct: 6 KVNLIWFGLIIGLFLILKGLELSGIMNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAYS I+ +L + V +I+ +I G+P+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYSSAIITGMMPTYDGFYLSMVVGVIIAAVVALIFGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M+EI + I++ +TNG AG+ V+ Sbjct: 126 GMAEIIRIIIVNGGELTNGAAGLTGILPYTSWP-------------------------VI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++L R+A T+R+++ A S+ + K+ F + + +AG+ Sbjct: 161 YFFVVIITILVLNFLRSATGRQAITLREDEIAAESMGVNVTKMKVIIFVIGAMISAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + + P F ++I + I +LGG+ S++ A +L + + Sbjct: 221 LYVSYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTIIAAVVLGIINMFLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + +AL LV+L R LL + Sbjct: 275 ---------SNLRMIIYALALILVMLFRPGGLLGTKE 302 >gi|311108397|ref|YP_003981250.1| urea ABC transporter permease UrtB 2 [Achromobacter xylosoxidans A8] gi|310763086|gb|ADP18535.1| urea ABC transporter, permease protein UrtB 2 [Achromobacter xylosoxidans A8] Length = 543 Score = 93.0 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 82/291 (28%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY ++ + + + + + + + Sbjct: 270 ITFGLMGVINMAHGELLMIGAYVTYVVQTAFRAWLPGWLDWYVLAALPLAFAVTALVGMA 329 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ + + + Sbjct: 330 LER--TVIRWLYGRPLETLLATWGISLILMQGVRTLFGAQNVEVGNPGWMSGGVTVLGGL 387 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ + L T + R I N++ + + AF + Sbjct: 388 VLSYNRLVIIGFAFFVVFLVWALLNHTRLGLFVRAITQNRRMADCVGVPTGRVDMLAFGL 447 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG + + + +V+LGG+ L+ A L GV + Sbjct: 448 GSGIAGLAGVALSQLGNV--GPDLGRGYIVDSFMVVVLGGVGQLAGTVIAALGLGGVNKF 505 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++ + L + R L R S Sbjct: 506 LEPYTGAVMAK-------------ITILALIVLFVQKRPQGLFAPRGRSVE 543 >gi|126736786|ref|ZP_01752524.1| inner-membrane translocator [Roseobacter sp. CCS2] gi|126713757|gb|EBA10630.1| inner-membrane translocator [Roseobacter sp. CCS2] Length = 399 Score = 93.0 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 126/363 (34%), Gaps = 32/363 (8%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + I+ L + P +L F + ++ + + +I+ +FA G +I+ G G L Sbjct: 10 RLLLIVIGLTMFAPFILNPFPEGAEMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYL 69 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S G+Y V + +++ I +S +I+G +++G SL+ G Y +I T Sbjct: 70 SFGHAAFLGAGSYGAVWMFKLLSMNVLPAIAISVIIAGLFSLLIGFISLRRSGIYFSILT 129 Query: 127 LIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 L +++ + P G + + + F Sbjct: 130 LAFAQMSFALAYSVLTPITGGETGLQLALDDPRIFGASQTATGNIPVPSLFGLEMRSSFE 189 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 +++ YY+ + + + + R+ R I+ NQ Sbjct: 190 WEVGAWLFTFNAGYYLAAAFMIFAFYMSIRIFRSPFGMMLRAIKSNQTRMSYTGLNARPY 249 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 L+AF +S + G+AG A+ + +++ + V+ + ILGG +L + Sbjct: 250 TLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGM 309 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSH 337 + + +N +S F + I LV++ Sbjct: 310 IKYFENIFSKINETILHSWFAFLPDGLENFVVAMIYPFIGKGWHLTLGIVFMLVVIFLPG 369 Query: 338 SLL 340 L+ Sbjct: 370 GLV 372 >gi|146278256|ref|YP_001168415.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025] gi|145556497|gb|ABP71110.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025] Length = 358 Score = 93.0 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 82/327 (25%), Positives = 138/327 (42%), Gaps = 15/327 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V ++ FL L + + +++ + LIY + A GL+I+ G G +SL A+GAY+ Sbjct: 31 VALVVGFLVLPFFMTDYWANAVFVPFLIYAIAAIGLNILTGYCGQVSLGTGGFMAVGAYA 90 Query: 81 YV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 ++ S +SI + + ++ I+ A G++ GLPSL+ +G YLA+ATL + K Sbjct: 91 VYKLMTSFPEVSIVIHVILAGGITAAVGVLFGLPSLRIKGFYLAVATLAAQFFLVWLFNK 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 N A + L + + Y F A I Sbjct: 151 VPWFYNYSASGQITAPERTLFGIAVTGANTPAW---------AKYLFCAVFLFALAWIAR 201 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP- 258 L R I W IRD A + + AKLSAFAVSS FIG+AGA F A + Sbjct: 202 NLTRGTIGRKWMAIRDMDIAAEIIGVNPLAAKLSAFAVSSFFIGIAGALFFAVYLGAAEV 261 Query: 259 -DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + F ++ +++ ++I+GG+ S+ A L+ + + L Sbjct: 262 GEAFGIQKSFLILFMIIIGGLGSIFGSFAGAAFLVLLPVFLKNV---LVGGLGWPSDLAA 318 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ + +++ H L +L Sbjct: 319 HIELMILGGLIIGFLILEPHGLAQLWR 345 >gi|288555728|ref|YP_003427663.1| branched chain amino acid ABC permease [Bacillus pseudofirmus OF4] gi|288546888|gb|ADC50771.1| branched chain amino acid ABC permease [Bacillus pseudofirmus OF4] Length = 333 Score = 93.0 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 124/312 (39%), Gaps = 29/312 (9%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 +Y + I + I+ + +GL+ + G G LSL +AIGAYS +L G Sbjct: 20 FPILVPNQYYLQILILVFIWTIAVYGLNTITGLTGQLSLAHAGFFAIGAYSLGLLTINAG 79 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + W ++ +I+ +G+ +L+ + + + ++I +T G G Sbjct: 80 IPFWAAFVLAIVITTIISFFIGIVALRTK-SHFFAIYTMSVGFLIYLIIYKSELTGGVRG 138 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + +G I+ YY++L L+ + L + + Sbjct: 139 LIGIPNPAPIGPLTFESIQ-------------SYYYLMLFFLLLTIFFMYRLFHSLLGKT 185 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + IR++++ +L +++ KL AF +S+ ++GA +A+ + P M + Sbjct: 186 FVAIRNSEELAETLGISVMRNKLLAFVISAGVASLSGALYASYVRFLGPQMADIHVAFEI 245 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +++GG+ +L+ T I++ + ++ + + + + Sbjct: 246 LLYLLVGGIGTLAGPLIGTFIVVVLTQMLQFLEEF---------------RMLVFGPIVV 290 Query: 330 LVILMRSHSLLR 341 L+IL ++ Sbjct: 291 LLILFYPRGIVG 302 >gi|322419575|ref|YP_004198798.1| inner-membrane translocator [Geobacter sp. M18] gi|320125962|gb|ADW13522.1| inner-membrane translocator [Geobacter sp. M18] Length = 321 Score = 93.0 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 127/320 (39%), Gaps = 29/320 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L+ + S Y+ ++ + + I M A GL++++G G +SL + +GAY Sbjct: 9 LVFALVVFLVPLPLSGGYLTNVLVFVGINSMLALGLNLLLGYAGQISLGQAAFFGLGAYG 68 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L + Y ++ W+ + + A+ +G P L+ +G YLA+ATL + I + Sbjct: 69 SGVLTTLYAMNPWVAMILVALCVALFAFAIGFPVLRLKGHYLAMATLGVGVIVNIAFNET 128 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G +G+ L T + ++ YY++ + L Sbjct: 129 VDLTGGPSGLSGIPNLAIGSFTFDTDLKN--------------YYLVWCFALGMILLSLN 174 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + R I D++ A + K+ F +S+ +AG+ + ISP Sbjct: 175 LVNSRFGRGLRAIHDSEVAARVMGVNARLMKVQVFTLSAFMSAIAGSLYCHVMTFISPAS 234 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F ++ +++++++GG+ S+ +L + E+ Y Sbjct: 235 FSFHFSVELLTMIVIGGLGSVYGSILGALLLTLLPEMLRTFQDY---------------D 279 Query: 321 TTLMVIALFLVILMRSHSLL 340 + + L + + L Sbjct: 280 IIVYGLLLITMTIYLPGGLA 299 >gi|260427238|ref|ZP_05781217.1| ABC branched chain amino acid family transporter, inner membrane subunit [Citreicella sp. SE45] gi|260421730|gb|EEX14981.1| ABC branched chain amino acid family transporter, inner membrane subunit [Citreicella sp. SE45] Length = 327 Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 117/327 (35%), Gaps = 31/327 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + L L + Y + +LI V+ G ++ +G+LG L+ + IGAY Sbjct: 17 AFWAVPALLLLLPLATNPYTQFIANGMLISVLVTLGFTLTIGNLGQLAFANTAFFGIGAY 76 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGAC-GMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + IL ++ G+ L IP++ + R YLAI TL E+ + + Sbjct: 77 ASAILAAKLGVPWLLTIPLAGAFGALGGFLASAAALRGIRTYYLAIITLAFGELMRWAYL 136 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 KP+T G G+ + + + +Y+ LG+ L Sbjct: 137 HAKPVTGGTDGMPMP---------------REALFGISLGDDSLKFYIFLGVTVLLVKAT 181 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L L R+ A +R+N+ A SL L F S +G AGA FA + P Sbjct: 182 LNLMRSRFGRAVMAVRENEIATASLAIPTARVILVTFMWSGFVVGCAGALFARHVGHVFP 241 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F I ++V++GG+ S+ +L + E Sbjct: 242 ESFGMLHLIASFAMVLVGGLGSVLGAVLGAVLLTALPEYLRAF---------------PG 286 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 + + V++ L L Sbjct: 287 MEELFFGLIVAGVLVAMPMGLASLLRR 313 >gi|257138231|ref|ZP_05586493.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 570 Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + + Sbjct: 296 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPASFLAAAALGVV 355 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + S + + Sbjct: 356 LER--TVLRHLYGRPLETLLATFGVSLILIQATRTIFGAQNVQVVNPSWMSGGVTVMQNL 413 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 414 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 473 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ ++ L V + Sbjct: 474 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 531 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 532 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 569 >gi|294338620|emb|CAZ86949.1| putative ABC-type branched-chain amino acid transport system, permease component, livM [Thiomonas sp. 3As] Length = 331 Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 132/321 (41%), Gaps = 26/321 (8%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L+L + + ++LIY + A GL++++G G LS + +G+Y Sbjct: 28 ILALVLLTAPAWLHYVGGYNDIASRVLIYGLAAMGLNLLLGHTGGLSFGHAAYFGLGSYG 87 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 ++ ++ L + ++ G ++ +++ RG Y A+ T+ + ++F I I+W Sbjct: 88 VGLMLKYMTHNVLLALLGGTLLGGVVAAVLAPIAVRRRGIYFAMITIAIGQMFYFIAIRW 147 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T G G T S F + + + YY+++ L A ++ Sbjct: 148 QAVTGGYDG-----------LTGFSRHTLHLFGFDWTMGSLGFYYLVVACFALGALVLWI 196 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + + + + IR+NQK L + +FA+S + +AG A + SP+ Sbjct: 197 VLNSPLGHTFVAIRENQKRLTFLGLPVQRYAAISFALSGLIVALAGGLNALLDNFTSPNT 256 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 ++ + ++ I +LGGM + AI + V + + + Sbjct: 257 LNYTFSGDLVVIAVLGGMRNFWGPLVGAAIFVLVRDYASSVTDNW--------------- 301 Query: 321 TTLMVIALFLVILMRSHSLLR 341 +++ + L +L ++ Sbjct: 302 MSVIGLIFVLSVLFFPLGVMG 322 >gi|291616196|ref|YP_003518938.1| BraD [Pantoea ananatis LMG 20103] gi|291151226|gb|ADD75810.1| BraD [Pantoea ananatis LMG 20103] Length = 521 Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 87/288 (30%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ + + I +++ + Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWMVQNLFQQFAPHYIGWYPLLALPVAFGLTAVIGMA 307 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L W + + L + + + Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNLEVANPAWLSGGLQVLPNL 365 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+L + F+ L L RT + R + N+ + AF + Sbjct: 366 VLPWNRIAVILFVVFVLILTWLLLNRTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 425 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L + ++ Sbjct: 426 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAALGLGILNKV 483 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L+++ + L I R L ++ Sbjct: 484 LEPQIGAVLGK-------------ILILVMIVLFIQKRPQGLFAVKGR 518 >gi|228476555|ref|ZP_04061237.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus salivarius SK126] gi|228251750|gb|EEK10815.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus salivarius SK126] Length = 316 Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 76/337 (22%), Positives = 137/337 (40%), Gaps = 42/337 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + I L + L+L + Y + + I I ++ G ++V+G G +L Sbjct: 6 KVNLIWFGLIIGLFLILKGLELSGIMNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAYS I+ +L + V +I+ +I GLP+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYSSAIITGMMPTYDGFYLSMVVGVIIAAIVALIFGLPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M+EI + I++ +TNG AG+ V+ Sbjct: 126 GMAEIIRIIIVNGGELTNGAAGLTGILPYTSWP-------------------------VI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++L R+A T+R+++ A S+ + K+ F + + +AG+ Sbjct: 161 YFFVVIITILVLNFLRSATGRQAITLREDEIAAESMGVNVTKMKVLIFVIGAMISAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + + P F ++I + I +LGG+ S++ A +L + + Sbjct: 221 LYVSYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTIIAAVVLGIINMFLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + +AL LV+L R LL + Sbjct: 275 ---------SNLRMIIYALALILVMLFRPGGLLGTKE 302 >gi|161521636|ref|YP_001585063.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189352198|ref|YP_001947825.1| branched-chain amino acid ABC-type transport system permease component [Burkholderia multivorans ATCC 17616] gi|160345686|gb|ABX18771.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189336220|dbj|BAG45289.1| branched-chain amino acid ABC-type transport system permease component [Burkholderia multivorans ATCC 17616] Length = 603 Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 75/324 (23%), Positives = 131/324 (40%), Gaps = 33/324 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V + L + L + Y+ +Y + A L++V G++G +SL IGA Sbjct: 312 AIVALVALAVVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L S G S + IP + I+ G ++ P+ + RG Y++IATL + E+ +++ Sbjct: 372 YASALLSSDLGWSPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI L + Y+ L + A + Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------ASTAQAAYWFTLTVLVAFALVQ 473 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L R+ + R +R++ A + K AFAV G++G A I+ Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F +I+ +++VILGG+ ++ LIG+ EL Y Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIAGALALIGLPELFRWAADY-------------- 579 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + L L++ R LL Sbjct: 580 -RMLIYGLVLLLLVRFRPQGLLGT 602 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 106/305 (34%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R+GL + + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVLLGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + +A + +LR T + A R + Sbjct: 126 PDWH-----------LRLGGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280 Query: 337 HSLLR 341 + L Sbjct: 281 NGLFS 285 >gi|91782151|ref|YP_557357.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|296162012|ref|ZP_06844811.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. Ch1-1] gi|91686105|gb|ABE29305.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia xenovorans LB400] gi|295887756|gb|EFG67575.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. Ch1-1] Length = 552 Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + +++ Sbjct: 278 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRFAPGAFDWYPLLAVPASFAAAGIVGIV 337 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + + + Sbjct: 338 LER--LVLKHLYGRPLETLLTTFGVSLILIQATRMLFGAQNVQVVNPAWMSGGVTVLPNL 395 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 396 ILPYNRLAILAFSLIVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 455 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L V + Sbjct: 456 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKA 513 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 514 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 551 >gi|167835749|ref|ZP_02462632.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia thailandensis MSMB43] Length = 316 Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 99/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ +GA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPGLGHV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIRAGENNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ + M F + + Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|325273293|ref|ZP_08139570.1| inner-membrane translocator [Pseudomonas sp. TJI-51] gi|324101578|gb|EGB99147.1| inner-membrane translocator [Pseudomonas sp. TJI-51] Length = 339 Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 111/301 (36%), Gaps = 24/301 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ +ILI+ + A ++++G GLLS I + +GAY +L ++ + +A Sbjct: 36 TLATEILIFALAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAA 95 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + +++G +++ G Y + TL S++ + T G G+ R Sbjct: 96 VFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRP---- 151 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 I + Y + + L + L + R+ + IR+N+ Sbjct: 152 -----NIEIAGHMLVDLADPRHFYVFVAVLFLLIFAGALRVIRSPFGSTLLAIRENETRA 206 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ K+ F +S A G+AGA +A + ++ + I+GG S Sbjct: 207 AAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGS 266 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L ++ + ++ + + L+ + L LV++ L Sbjct: 267 LFGSLLGAGAIVLLGDVLSELWPRW---------------LMLLGVILILVVVFMRGGLW 311 Query: 341 R 341 Sbjct: 312 G 312 >gi|221210797|ref|ZP_03583777.1| inner-membrane translocator [Burkholderia multivorans CGD1] gi|221169753|gb|EEE02220.1| inner-membrane translocator [Burkholderia multivorans CGD1] Length = 603 Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 75/324 (23%), Positives = 131/324 (40%), Gaps = 33/324 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+V + L + L + Y+ +Y + A L++V G++G +SL IGA Sbjct: 312 AIVALVALAVVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L S G S + IP + I+ G ++ P+ + RG Y++IATL + E+ +++ Sbjct: 372 YASALLSSDLGWSPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G GI L + Y+ L + A + Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------ASTAQAAYWFTLTVLVAFALVQ 473 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L R+ + R +R++ A + K AFAV G++G A I+ Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F +I+ +++VILGG+ ++ LIG+ EL Y Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIAGALALIGLPELFRWAADY-------------- 579 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + L L++ R LL Sbjct: 580 -RMLIYGLVLLLLVRFRPQGLLGT 602 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 106/305 (34%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R+GL + + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVVVGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + +A + +LR T + A R + Sbjct: 126 PDWH-----------LRLGGATLGALDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280 Query: 337 HSLLR 341 + L Sbjct: 281 NGLFS 285 >gi|229079138|ref|ZP_04211687.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock4-2] gi|228704155|gb|EEL56592.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock4-2] Length = 317 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 125/322 (38%), Gaps = 31/322 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + + I + ++S I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F YYV L ++ Sbjct: 122 RGLTHGGDGFTFGVPEIFRDRF-------------------TFYYVSLVCLCFIFILLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + I+ + + Y R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLIGAIAGSGIIESLKYYLSELATEY---------PIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T ++ + +V+L+ L+ Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295 >gi|331696302|ref|YP_004332541.1| ABC transporter-like protein [Pseudonocardia dioxanivorans CB1190] gi|326950991|gb|AEA24688.1| ABC transporter related protein [Pseudonocardia dioxanivorans CB1190] Length = 624 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 111/292 (38%), Gaps = 15/292 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 S+ I ++IY M A L++++G G S+ G Y +LG+ L L++ + Sbjct: 55 SIAITVMIYAMCAMALTVLMGWAGQPSIMSAGLLIAGGYCAALLGTWAELPFLLVLVLVL 114 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + G++ LP+ + G YL ++TL + + N+ + + AG + F Sbjct: 115 VAGFVFGLLAALPARRLGGIYLLLSTLAIFYLITNVGNYVQTVEKAYAGFTLPYASIFGF 174 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 F V + F +LR T I AW ++++ A Sbjct: 175 DLDSPSRWFP---------------VCAVVLFCVYEYFRYLRSTRIGRAWILLKEHPDAA 219 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + +AFA ++AF +AGA A S D +++ I +++LG + S Sbjct: 220 RVAGIRVQAYIGTAFATTTAFHFVAGALLANFIGSASYDSVTLLDSVNFIVMIVLGTIGS 279 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 L I+ V L S D + +I + +++ Sbjct: 280 LPGAIIGAVIISAVPPLINTFFGSGNASGFVSDNLLAIELIVFALIGIVVLL 331 >gi|239816456|ref|YP_002945366.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239803033|gb|ACS20100.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 328 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 132/327 (40%), Gaps = 16/327 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + VVY +LL + A Y + ++L + +FA ++++G G+LS Sbjct: 4 ISLVVYGVLLLALIAAPFIGFYPVFVM-KVLCFALFACAFNLLLGYTGMLSFGHAAFLGG 62 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY + L+ L + + G++ G +++ +G Y ++ TL ++++ + Sbjct: 63 SAYLTGHALKVWHLTPELGLIAGTLAGALLGLVFGWLAIRRQGIYFSMITLALAQMMYFV 122 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ T G+ G+ R F + ++ MYYV L + + Sbjct: 123 ALQAP-FTGGEDGLQSVPR-------------GKLFGLIDLRDDLTMYYVALVIVVAAFL 168 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 +I + + I++N+ SL + KL AF +S+A G+AG+ Sbjct: 169 LIARTVHSPFGQVLKGIKENEPRAISLGYDVNRFKLLAFVISAALSGLAGSLKTLVLGFA 228 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCS 315 S ++ + VI + ++GG+ +LS +A+++ + + + + + + Sbjct: 229 SLSDVHWTASGHVILMTLVGGLGTLSGPLVGSAVVVLLENKVGDFGSFMAHLTGVDWFNT 288 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 T + + + +L ++ Sbjct: 289 LGESVTMVTGLIFVICVLAFRRGIMGE 315 >gi|15612812|ref|NP_241115.1| ABC transporter (permease) [Bacillus halodurans C-125] gi|10172861|dbj|BAB03968.1| ABC transporter (permease) [Bacillus halodurans C-125] Length = 367 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 106/336 (31%), Gaps = 27/336 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +++ +++ L + + ++ + + + + GL ++ G G+LSL I + +GAY Sbjct: 16 LMFLIIVLLLVLPFFLSDFRTNLLGRYIAFAILVLGLDLLWGYTGVLSLGHGIFFGLGAY 75 Query: 80 SYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 + S +W I ++ L + L Sbjct: 76 IMAMYLSLEGMTGAVPDFMLWNGITGLPLLWQVFSNPFIAIIGAVTIPMLIASLLAFFTF 135 Query: 133 ------FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 ++ + I + + F + S + +YY+ Sbjct: 136 RNRIKDVYFTILTQALVLVMVTLIVSQQSITGGTNGLTGFSTIFGYSLSSASTQQVLYYL 195 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 LG L + L + A IRD + K++ F +S+ G+AG Sbjct: 196 TLGCLILVFLLCAALVNSRFGRALVAIRDGENRLRFSGYDTSMFKVAIFTLSAGIAGLAG 255 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + I+P M +I +I V +GG +L + Sbjct: 256 MLYVLQVGMITPSMIGIIPSIEMILWVAIGGRGTLIGPVIGALV--------------TN 301 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ F S L+ +++L ++ L Sbjct: 302 SAKTFFSESHPEAWLYLLGTVFVVIVLFLPGGIMSL 337 >gi|116747761|ref|YP_844448.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116696825|gb|ABK16013.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 326 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 130/323 (40%), Gaps = 29/323 (8%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + LLL Y + I L++V+ +++ G G +S I + IGAY+ Sbjct: 9 LVILLLLAVFPLVIQSDYYRHILIIALMWVVIGSSWNLLSGYTGQVSFGHAIFFGIGAYT 68 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 + ++ +S W + + ++ G+++G + RG Y A+AT+ + EIF+ + +W Sbjct: 69 AGLCTTQLDISAWYGMLLGGPVALLIGLVIGWICFRLRGPYFALATIAVGEIFRLVATEW 128 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 T G GI +I YY+ LG+ I Sbjct: 129 VDFTEGMQGI---------------------LIIQTFRSKIPYYYLALGLAAACIYSIHT 167 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + + IR++Q A +L + K + +S+ F G+AGAF+ I P + Sbjct: 168 VMNSKWGYYFLAIREDQDAAEALGISSFRYKSLSLMISAFFTGLAGAFYMNYMAFIDPQV 227 Query: 261 FKFSENIIVISIVI--LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 I +++I++ +GG+ +L I++ + E F + + Sbjct: 228 VFSLHFISIMAILVGIIGGVGTLWGPPTGAFIMVLLQETFRSAFFGMLPKWV------SE 281 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 H + + + VI ++ ++ Sbjct: 282 AHVLVFGLLVIFVIRYMANGIVG 304 >gi|171060321|ref|YP_001792670.1| inner-membrane translocator [Leptothrix cholodnii SP-6] gi|170777766|gb|ACB35905.1| inner-membrane translocator [Leptothrix cholodnii SP-6] Length = 335 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 109/323 (33%), Gaps = 18/323 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L + S Y + +I+I+ + A L ++VGS GL+ + IGA Sbjct: 7 LFVALCFALLAVYPLVSGSYGIDLVSKIMIFAVLALSLELLVGSTGLVCFGQAAFFGIGA 66 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ V+L + + +++++ A ++ I + ++ Sbjct: 67 YAAVLLSPEGEAAALWWVLPASVLAAALFALLMGALSLRTKGVYFIMVTLAFAQMAYYIV 126 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 P+ G GIY+ + + + + Y + Sbjct: 127 HDTPLGGGTDGIYLYVKPV---------LALGGATLIDLDRPMLFYAFTWACLLGVFGFL 177 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ A I+ N++ + + KL+AF +S G+AG F ++P Sbjct: 178 ALLLRSRFGRALAGIKVNEQRMRATGFSTYPYKLAAFVISGGIAGLAGFLFGVKDGFVNP 237 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 ++ + + V+ ++ILGG+ L + E +F Sbjct: 238 ELMSWHMSGAVLIMIILGGLGHLRGALIGAFAFALLQEFFKS---------EAIFGAFAK 288 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + + + + + L+ Sbjct: 289 HWHLGLGLTIIASVALLPRGLVG 311 >gi|163744565|ref|ZP_02151925.1| high-affinity branched-chain amino acid transport system permease protein [Oceanibulbus indolifex HEL-45] gi|161381383|gb|EDQ05792.1| high-affinity branched-chain amino acid transport system permease protein [Oceanibulbus indolifex HEL-45] Length = 356 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 67/321 (20%), Positives = 119/321 (37%), Gaps = 7/321 (2%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A VY ++ L L Y+ + Q+ I ++ G++I+ G GL+SL AIGA Sbjct: 24 AFVYATIVALALFTAFGNDYLILIASQMGILLIAVVGINILTGYTGLVSLGHGAFVAIGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ I G+ I + + A + + L + I Sbjct: 84 YAVTIFGNLGAGVIPAGLMPFISVPLAVALAAAVGVLVGLPSLRVKGLYLAVATLAANFI 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 I + G V + + M+ ++ + +S Sbjct: 144 VIFLIE-------EDLFAPWTGGMVGINTNVPNLLGWELDTKREMFGLIAVVGLVSLLAA 196 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L RT I A+ IRD + L +++ KL +FA+S+A+ G+AGA FA RI P Sbjct: 197 QNLIRTRIGRAFIAIRDRDYSAEILGISLLRYKLMSFALSAAYCGLAGALFAYFYARILP 256 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F+ + ++ +++ +I+GGM I++ V EL + Sbjct: 257 EQFELALSLNLVAALIIGGMGRTMGPVFGVIIVVLVPELIKVLFGALAGDSAGAGQLRAP 316 Query: 319 RHTTLMVIALFLVILMRSHSL 339 + L L +L + Sbjct: 317 LQQIAFGVLLVLFLLKEPLGI 337 >gi|88854903|ref|ZP_01129569.1| putative branched chain amino acid transport system permease abc transporter protein [marine actinobacterium PHSC20C1] gi|88816064|gb|EAR25920.1| putative branched chain amino acid transport system permease abc transporter protein [marine actinobacterium PHSC20C1] Length = 345 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 116/343 (33%), Gaps = 8/343 (2%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + ++ ++ L+ + L A I + +Q LI V+F GLS+ G+ G++S Sbjct: 5 TRIRRLFETPILLVALMGLVALIAVFGDPTITRVTVQALIAVVFVAGLSLFSGNSGVMSF 64 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 V AIGAY+ L L + + + + P G A + Sbjct: 65 GHVGFMAIGAYTTAYLTIPVNLKSSMFSDLPESLGFLATIHAPFPIAVLVGGLAAAVLAL 124 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 ++ L + +A + S + + + Sbjct: 125 VTAPIMARLGGLQ-----AGIATLALLVIVFTVLNSWTDVTRGSSSMIGLPKSTTIWWAA 179 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 G+ L I +++ + R++ A + + ++ A+ +SS +G AGA Sbjct: 180 GIAALVIVIAWAYKKSRSGLQLQASREDYLAATASGIAVGRHRVFAWVLSSIPVGFAGAL 239 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 +A + F S I +++LGG SLS + + E+ F Sbjct: 240 YAGFFTTFNSQTFFLSLTFSFIVMIVLGGYLSLSGAVIGALGVSVLQEILRRFQDGAFTG 299 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + ++ L V++ L+ R F +R Sbjct: 300 GISLPAGIAD---LILAAVLLFVLVKAPLGLMGTRELRLFRKR 339 >gi|89897770|ref|YP_521257.1| hypothetical protein DSY5024 [Desulfitobacterium hafniense Y51] gi|89337218|dbj|BAE86813.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 361 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 82/335 (24%), Positives = 139/335 (41%), Gaps = 23/335 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + + L +V L++ L + + + I YV+ A L++ VG LG L Sbjct: 9 KTTRNNLYTYALVIVAYLIVQLLISGGNISSSLQGQLVPICAYVILAISLNLTVGILGEL 68 Query: 67 SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL +IGA++ V+ + + + V A+ +G G ++G+P L+ +G Sbjct: 69 SLGHAGFMSIGAFAGVVACISLEQIIPITILRLIVSLIVGALFAGVAGFLIGIPVLRLKG 128 Query: 120 DYLAIATLIMSEIFQNILIKW-KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 DYLAI TL EI +NI+ + I L + I Sbjct: 129 DYLAIVTLAFGEIIKNIINILYVGLDKAGLHISFLSDSNALNLGEGGRVIIDGPLGITGI 188 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 ++ + + + ++ I+L L + A +RDN+ A S+ I KL AF S Sbjct: 189 PKLSTFTIGFVLILITLFIVLNLVDSRSGRAIMALRDNRIAAESVGIHITKYKLMAFVTS 248 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 +A G AG FA + I F F+ +I+++ V+LGG+ ++ A +L + EL Sbjct: 249 AALAGAAGTLFAMNYSTIIASKFGFNTSILILVFVVLGGLGNIRGSIIAATLLTILPELL 308 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 N Y L I L L++L Sbjct: 309 REFNSY---------------RMLLYAIVLILIML 328 >gi|206562472|ref|YP_002233235.1| putative branched-chain amino acid transporter [Burkholderia cenocepacia J2315] gi|198038512|emb|CAR54470.1| putative branched-chain amino acid transporter [Burkholderia cenocepacia J2315] Length = 604 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 127/319 (39%), Gaps = 33/319 (10%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 + L + Y+ +Y + A L++V G++G +SL IGAY+ + Sbjct: 318 IAAAAVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASAL 377 Query: 84 LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 L S G S + IP + +I+ G ++ P+ + RG Y++IATL + E+ +++ W + Sbjct: 378 LSSDLGWSPAVTIPCAGVITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGL 437 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 T G GI L + Y+ + + A + + L R Sbjct: 438 TRGPLGITGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQVRLLR 479 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 + + R +R++ A + K AFAV G++G A I+ F Sbjct: 480 SHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDS 539 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 +I+ +++VILGG+ ++ LIG+ EL Y + Sbjct: 540 QVSILALTMVILGGLGNVLGGIVGAIALIGLPELFRWAADY---------------RMLI 584 Query: 324 MVIALFLVILMRSHSLLRL 342 + L L++ R LL Sbjct: 585 YGLVLLLLVRFRPQGLLGT 603 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R+GL + + + Sbjct: 7 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 66 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 67 AAVVVGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 126 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +A + +LR T + A R + Sbjct: 127 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 176 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 235 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 281 Query: 337 HSLLR 341 + L Sbjct: 282 NGLFS 286 >gi|167035889|ref|YP_001671120.1| urea ABC transporter permease UrtC [Pseudomonas putida GB-1] gi|166862377|gb|ABZ00785.1| urea ABC transporter, permease protein UrtC [Pseudomonas putida GB-1] Length = 359 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 100/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 A + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 ALQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 DGLPGFMTFLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F + ++ + +G+ S + Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRTILGFDITAQGTRAVLFLLTVGLLLASLYLC 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLTRSKFGRLLTAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + LV L ++ L Sbjct: 329 FWLFFLGALFILVTLYLPKGVVGL 352 >gi|298291374|ref|YP_003693313.1| urea ABC transporter permease UrtB [Starkeya novella DSM 506] gi|296927885|gb|ADH88694.1| urea ABC transporter, permease protein UrtB [Starkeya novella DSM 506] Length = 539 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 90/297 (30%), Gaps = 18/297 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G +G++++ +GAY+ ++ L S +I+ + Sbjct: 260 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQELIRTYNPGLFDWSLIIAIPLAFLFT 319 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + + + +L W + I S Sbjct: 320 GLIGVIIER--TVIRFLYGRALETLLATWGISLILQQAIRTLFGPTNREVGAPSW-MSGS 376 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + ++++ + +++ LR T I R + N++ S+ + Sbjct: 377 FELGQMSITYGRLWIIVFAMLVFVALLATLRLTRIGLEMRAVTQNRRMAASMGIRTNWVD 436 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F + S G+AG A S+ S I +V+ GG+ +L L Sbjct: 437 AMTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFLVVVFGGVGNLWGTLVGAMSL 494 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +L +++ + L I R L L+ S Sbjct: 495 GVANKLLEPYAGAVLGK-------------IALLVIVILFIQKRPRGLFALKGRSIE 538 >gi|332701783|ref|ZP_08421871.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332551932|gb|EGJ48976.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 380 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 129/366 (35%), Gaps = 37/366 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + + + ++ + L Y+ ++ + + I ++ + L+++ G++G + Sbjct: 22 FDLRNLSVPAILLIAFVGLLAACMTGALNLYMQTVLMFMGINIIMSTSLNLINGNMGEFA 81 Query: 68 LNCVIAYAIGAYSYVILGSRYGLS----------------IWLLIPVSAMISGACGMIMG 111 A+GAY ++ L + + ++ + G+++ Sbjct: 82 CGHAAFMAVGAYVSSLVTVIMFTQSKFGAPLLPPELTLLAFPLALLIGSLAAALVGLLIA 141 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 +PS K RGDYLAI T+ I ++ + I G G R+ L Sbjct: 142 IPSFKTRGDYLAIITIAALYIVKSAIENIDAI-GGARGFMGMRRVTNAMEQTLDLPWM-- 198 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + + II + I ++ A ++ K Sbjct: 199 ------------VIWIFIGTVFTVWIIRRYVSSTYGKGVMAICQDEVAAEIMSVNTNHIK 246 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L F +SS G+AG FA I+P F ++ + +V LGGM S+S + + Sbjct: 247 LVTFMLSSGLAGLAGGLFAHVLGYINPGSFTILKSTEALVMVYLGGMGSISGAVMSAMLF 306 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFN------MRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++E + + L + L+ + L L++ R ++ R Sbjct: 307 TLLLESLRFIIPWIDQLLHLIHVLPAGYEISQVWKWVLIPLLLILLMQFRPEGIMGNREL 366 Query: 346 SNFLER 351 S+ R Sbjct: 367 SDIFPR 372 >gi|78188821|ref|YP_379159.1| branched-chain amino acid ABC transporter, permease protein [Chlorobium chlorochromatii CaD3] gi|78171020|gb|ABB28116.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Chlorobium chlorochromatii CaD3] Length = 333 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 131/343 (38%), Gaps = 28/343 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + +A + + L + YI + I +L+ + +I+ G G S + Sbjct: 4 MLFIAAFGVVAAIVPLLVGDNNPYILGILISLLMMAALSSAWNILGGYTGQYSFGHAAYF 63 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 GAY+ ++L + + L I + + S +I G + RG Y +A++ ++EI + Sbjct: 64 GAGAYTTLLLVLNFNFNPLLSIALGIITSVIIALITGSIVFRLRGHYFGLASIAVAEIVR 123 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ T G G+ +AD + + ++ YY +L + + Sbjct: 124 LAVLNFE-FTGGAQGLLLADLAMWDI---------------DLNSKLPFYYGMLIVLLAT 167 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +I + + + IR++Q A SL I + K + +S+A + G+ + Sbjct: 168 LAITAYTVKAKTGYYLQAIREDQDAASSLGINISYYKNKSLVISAALTSLLGSLYGLYIR 227 Query: 255 RI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC-----------GMN 302 I + + +I +I I+GG+ +L +L+ + E+ G+ Sbjct: 228 FIDTHAVLDLRLSIEIILTAIIGGVGTLWGPVLGALVLVPLAEVLRSNLLGDMLVKAGIV 287 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + H + I L IL +L L Sbjct: 288 SETSAIGIFLKENLAHAHVLVYGIITVLCILYLPKGILGLLRR 330 >gi|89899807|ref|YP_522278.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89344544|gb|ABD68747.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 333 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 72/333 (21%), Positives = 126/333 (37%), Gaps = 30/333 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + LL A ++ Y +L Y + GL+I+ G G +SL +A+GAY Sbjct: 24 WILLLLALAVGLAFVAKGYHLFQATMVLAYAIALLGLNILTGYNGQISLGHGAFFALGAY 83 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI- 138 IL G W +P + + G + G P+LK G YLA+AT + +L Sbjct: 84 VAAILMEHAGAPYWATVPAAGVFCLVVGYLFGRPALKLEGLYLALATFALGVAMPQLLKY 143 Query: 139 -KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + T G GI + G + +Y LG+ + I Sbjct: 144 KHLEAWTGGVQGIVLMKPDAPFGLPLTQDQW--------------LYLFALGVAGVMFVI 189 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L ++ A R IRD+ A ++ K +F VS+A+ G+ GA A + +S Sbjct: 190 AHNLLQSGSGRAMRAIRDHAMAAEAMGVDNRHYKSMSFGVSAAYTGVGGALSAIAVQFVS 249 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PD F +I ++ +++GG+ +L ++ V L ++ Sbjct: 250 PDSFTLFLSISLLVGIVVGGVGTLWGAFFGAMFIMFVPNLAEKVSKA------------- 296 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L ++ + ++ L N Sbjct: 297 -APWAVYGVVLIAIMFVMPGGVMGLLRKLNERR 328 >gi|282864661|ref|ZP_06273716.1| inner-membrane translocator [Streptomyces sp. ACTE] gi|282560600|gb|EFB66147.1| inner-membrane translocator [Streptomyces sp. ACTE] Length = 653 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 105/310 (33%), Gaps = 27/310 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 VV + + L G + + + ++G+Q + + A+G++ V+ S G + L+ A+ Sbjct: 31 ALVVLLVAMSLLSGDFLTTQNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 89 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 A + G+ +WL + ++ ACG + G + ++ Sbjct: 90 ATVLAWSATSAGVPVWLAVILAVATGIACGFVNGALVAYGKLPSFIATLAML-------- 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 VA L + + + ++ +L M + Sbjct: 142 -------------SVARGLSLVISQGSPIAFPDSVSVLGDTLGGWLPVPVLVMIAMGLLT 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L RT I + I N++A + KL+ +A+S F +AG A+ Sbjct: 189 ALILARTYIGRSMYAIGGNEEAARLSGLRVNKQKLAIYALSGLFAAVAGIVLASRLVSAQ 248 Query: 258 PDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 P + E + ++VI GG+ S IL + ++ F + Sbjct: 249 PQAAQGYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQVVI 308 Query: 313 DCSFNMRHTT 322 + Sbjct: 309 GVVIALAVLL 318 >gi|326316373|ref|YP_004234045.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373209|gb|ADX45478.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 293 Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 18/307 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ ++GI LIY + A GL++ G L++ V +A+GAY+ +L + + Sbjct: 3 AYLCAIGIVALIYCLLALGLNLQFGLTRLVNFGVVAFFAVGAYTSGLLSLKGLP-LPACF 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++SG + +GL SL+ R DYLAI TL SE + + + +TNG G+ +L Sbjct: 62 AAAGLLSGLLALPIGLLSLRLRDDYLAIVTLGFSEAVRITIQQESWLTNGVQGLPGLPKL 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++ ++ VL + + + L R+ + I D+ Sbjct: 122 FAAW--------------GPGTSDMAIFAVLAMIVGIVCWGTVRLTRSPFGRLLKAIGDD 167 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A +L K+ F + +A G+AGAF+A I+P+ F V +++G Sbjct: 168 EAALSALGKDPARFKVQVFMLGAALAGVAGAFYAHFITFITPEQFIPLITFYVWMGLVMG 227 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G ++ + +L+ +E + + + +AL LV L R Sbjct: 228 GSGTVRGAMFGSLLLMVFLEGSRFAKDWVPGVS---EVGMASLRLAAVGLALILVTLYRP 284 Query: 337 HSLLRLR 343 H L + Sbjct: 285 HGLFGGK 291 >gi|327396435|dbj|BAK13857.1| high-affinity branched-chain amino acid transport system permease protein BraD [Pantoea ananatis AJ13355] Length = 521 Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 87/288 (30%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ + + I +++ + Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWMVQNLFQQFAPHYIGWYPLLALPVAFGLTAVIGMA 307 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L W + + L + + + Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNLEVANPAWLSGGLQVLPNL 365 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+L + F+ L L RT + R + N+ + AF + Sbjct: 366 VLPWNRIAVILFVVFVLILTWLLLNRTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 425 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L + ++ Sbjct: 426 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAALGLGILNKV 483 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L+++ + L I R L ++ Sbjct: 484 LEPQIGAVLGK-------------ILILVMIVLFIQKRPQGLFAVKGR 518 >gi|313500825|gb|ADR62191.1| Branched-chain amino acid ABC transporter, permease protein, putative [Pseudomonas putida BIRD-1] Length = 359 Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 100/330 (30%), Gaps = 27/330 (8%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L A Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 37 LLPADHALHVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYL 96 Query: 86 S----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 W +P + + L L L + Sbjct: 97 MRQAAGEGLPGFMTFLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKG 156 Query: 136 ILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + AG+ + R + S F + ++ + +G+ Sbjct: 157 VYFSIMTQALTFAGMLLFFRNETGFGGNNGFTSFRTILGFDIAAQATRAVLFLLTVGLLL 216 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S + L R+ +RD + KL + +S+ G+AGA + Sbjct: 217 ASLYLCWCLTRSKFGRLLTAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQ 276 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P + +I V LGG +L ++ G+ F Sbjct: 277 VGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------F 322 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F + LV L ++ L Sbjct: 323 TVAFPEFWLFFLGALFILVTLYLPKGVVGL 352 >gi|254452963|ref|ZP_05066400.1| branched-chain amino acid ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198267369|gb|EDY91639.1| branched-chain amino acid ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 630 Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 95/311 (30%), Gaps = 26/311 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ I + + Sbjct: 341 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIVPDYTLSIIIAL 400 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ ++ A G+ M + + + TL+ + +L + G + Sbjct: 401 PMAFAVTFAAGVAMERLVI-RHLYHRPLETLLATFGIAIVLQQLAKNIFGTQARPLTSP- 458 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V + I+ L+RT + R + N Sbjct: 459 --------DWLAGAWVVNDVVQISTIRIAIFALALLFLCLILYILKRTRLGLEVRAVTQN 510 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 S+ + F + S G+AG S + Sbjct: 511 PGMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLYAKVTSEMGADYIVQ---------- 560 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 S + + + + + F+ S + T M++ + L I R Sbjct: 561 ---SFMTVVVGGVGNVWGTLAGASLIGFTQKGIEFFNPSNTLAAQTYMILFVILFIQFRP 617 Query: 337 HSLLRLRTPSN 347 ++ L+ + Sbjct: 618 KGIVALKARAA 628 >gi|16329974|ref|NP_440702.1| hypothetical protein slr1201 [Synechocystis sp. PCC 6803] gi|1652460|dbj|BAA17382.1| slr1201 [Synechocystis sp. PCC 6803] Length = 410 Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 102/349 (29%), Gaps = 36/349 (10%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDS--------MGIQILIYVMFAWGLSIVVGSLGLL 66 + + A + ++ L L +++ + + + L + A G+ ++ G GLL Sbjct: 30 VLVFACIPLIIAVLSLSDGGPSQWLLNNFPFLRLRLMGRFLSLAIIALGIDLIWGYTGLL 89 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 SL I +A+G Y++ + + L +I + Sbjct: 90 SLGHGIFFALGGYAFAMYLNLQLPEGQLPEFFGLYGVDKLPLIWQPFHSLPVTVLAMVLV 149 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF--------------FRF 172 LI I I L + F + Sbjct: 150 PGAIAALLGYLIFRNRIKGVYFSILTQAALLVFYNFFNGQQKLINGTNGLKTDTERIFGY 209 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 +S ++ Y V + L + WL IRD++ K+ Sbjct: 210 LASSDGVQLVFYEVTVLALLLVYILCRWLTSGRFGRILVAIRDDETRVRFTGYDPTGFKV 269 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 F +S A G++G + I+P + + +I ++ V +GG +L T ++ Sbjct: 270 LVFGISGAIAGLSGGLYTVQTGIITPSIMDVAFSIEMVIWVAVGGRATLVGAVLGTLLVR 329 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +V+ + + ++ Sbjct: 330 LAQSSLSE--------------QFPEVWLFFQGALFLIVVTVLPNGIVG 364 >gi|126736708|ref|ZP_01752447.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. CCS2] gi|126713823|gb|EBA10695.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. CCS2] Length = 646 Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 101/311 (32%), Gaps = 26/311 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ I + + Sbjct: 357 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGFVVQQFVPDYTLSIIIAL 416 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ +I+ G++M + + + TL+ + L + G + Sbjct: 417 PLAFVITFGAGVLMERTVI-RHLYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSP- 474 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V + + I+ L+RT + R + N Sbjct: 475 --------EWLDGALIFNDVVAISYIRVAIFVLALVFLCIILFILKRTRLGLEVRAVTQN 526 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 S+ + F + S G+AG S + + +V Sbjct: 527 PGMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLYAQVTSEMGASYIVQSFMTVVVGG- 585 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 + ++ +++ + + +N S + T M++ + L I R Sbjct: 586 -VGNVWGTLAGASLIGFLQKGIEWLNP-----------SNTLAAQTYMILFIILFIQFRP 633 Query: 337 HSLLRLRTPSN 347 ++ L+ + Sbjct: 634 KGIVALKGRAA 644 >gi|225573611|ref|ZP_03782366.1| hypothetical protein RUMHYD_01805 [Blautia hydrogenotrophica DSM 10507] gi|225039029|gb|EEG49275.1| hypothetical protein RUMHYD_01805 [Blautia hydrogenotrophica DSM 10507] Length = 315 Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 108/306 (35%), Gaps = 24/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IGAY ++ ++ GLS + + Sbjct: 26 SYLINGLSLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGAYVTLMGMTKSGLSPIVSV 85 Query: 97 PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 ++ ++ A GM++ + R +A LI + +L + G Sbjct: 86 LIAVVVCTALGMVIERVAYKPLRNAASPLAVLITAIGVSYLLQNVALLIFGANAQSFPSA 145 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + G ++ + ++ + ++ +++++ A R + + Sbjct: 146 VKWEGISLAD---------GALNVSGETIVTIVICVVIMVVLMTFIKKSKAGQAMRAVSE 196 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + FA+ SA +AG ++ ++P I + Sbjct: 197 DKGAAQLMGINVNGTIALTFAIGSALAAIAGVLLCSAYPSLTPYT-GAMPGIKAFVAAVF 255 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ +L + L ++ L +V+L++ Sbjct: 256 GGIGSIPGAFIGGILLGIIEILGKAYISSQMADA-------------IVFAVLIIVLLVK 302 Query: 336 SHSLLR 341 LL Sbjct: 303 PTGLLG 308 >gi|206901035|ref|YP_002250651.1| branched-chain amino acid ABC transporter, permease protein [Dictyoglomus thermophilum H-6-12] gi|206740138|gb|ACI19196.1| branched-chain amino acid ABC transporter, permease protein [Dictyoglomus thermophilum H-6-12] Length = 330 Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 109/311 (35%), Gaps = 24/311 (7%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + I I + A L+++ G G S+ A G Y L +G I L Sbjct: 25 NPYFYQVLIFWGINSILAMSLNLINGFTGQFSIGHAGFMAAGGYLSAALTVYHGDKIIKL 84 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + + L A L + + +K + G R Sbjct: 85 LSFMPESISKNIVFFIFLIIGG----LFSALLGVIIGIPTLRLKGDYLAIATLGFGEIIR 140 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + V I ++ ++ F+ + + ++ A +IR+ Sbjct: 141 VIIYNMDVVG-----GARGFPGIPQLTNSVWVMFWAFICFITLYRIINSSHGRAIISIRE 195 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A ++ + K+ AF++ + F G+AG F + P F F ++ V+ +++L Sbjct: 196 DETASEAMGVNTTYYKVLAFSIGAFFAGIAGGLFGHYLMLLHPASFTFMRSVEVLLMIVL 255 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ SL+ +L + E G + + + L +++L+R Sbjct: 256 GGLGSLTGSIIGAFVLTVLPEALRGFSG---------------LRLVIYSLTLIILMLIR 300 Query: 336 SHSLLRLRTPS 346 L+ R S Sbjct: 301 PTGLMGNREIS 311 >gi|21221199|ref|NP_626978.1| bifunctional carbohydrate binding and transport protein [Streptomyces coelicolor A3(2)] gi|256787620|ref|ZP_05526051.1| bifunctional carbohydrate binding and transport protein [Streptomyces lividans TK24] gi|289771513|ref|ZP_06530891.1| bifunctional carbohydrate binding and transporter [Streptomyces lividans TK24] gi|6714794|emb|CAB66286.1| bifunctional carbohydrate binding and transport protein [Streptomyces coelicolor A3(2)] gi|289701712|gb|EFD69141.1| bifunctional carbohydrate binding and transporter [Streptomyces lividans TK24] Length = 651 Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 105/325 (32%), Gaps = 39/325 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +V +++ G + + ++G+Q + + A+G++ V+ S G + L+ Sbjct: 28 ALTALIVLVVVMSALSGDFLTADNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 86 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ A + G+ + L + +S + ACG++ G + ++ Sbjct: 87 ALSATVLAWSATEAGMPVALAVLLSVLTGIACGLVNGFLISYGKLPPFIATLAML----- 141 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 V L + + + ++ +L M + Sbjct: 142 ----------------SVGRGLSLVISQGSPIAFPDSVSHLGDTLGGWLPVPVLVMIVMG 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L RT I + I N++A + KL+ +A S F AG A+ Sbjct: 186 LITAFVLGRTYIGRSMYAIGGNEEAARLSGLRVKRQKLAIYAFSGLFAAAAGIVLASRLS 245 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 P + E + ++VI GG S IL + ++ F Sbjct: 246 SAQPQAAQGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSAF--- 302 Query: 310 LKFDCSFNMRHTTLMVIALFLVILM 334 ++ + + L +L Sbjct: 303 ---------WQQVVIGVVIALAVLF 318 >gi|300313933|ref|YP_003778025.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076718|gb|ADJ66117.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 334 Score = 92.2 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 124/296 (41%), Gaps = 10/296 (3%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ ++L++ + A G ++++G GL+S I + +G+Y+ ++ + L++ + ++A Sbjct: 28 TLATEVLVFALAALGCNLLLGYTGLMSFGQGIFFGVGSYTAGVVLLQLKLALLPALALAA 87 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + +++G S++ RG Y + TL +++F + K +T G G+ R Sbjct: 88 LGGALVALLVGWFSIRQRGTYFVMLTLAFAQMFYFLAYTMKDVTGGDNGLLDIPRPP--- 144 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + F Y V+ + L ++ + + + +R+N+ Sbjct: 145 ------LALFGLTLLPTTSSWQYYTVVAILFVLVFWLLQRVVDSVLGKTLLAVRENEARA 198 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 +L + KL+AF +S A G+AG A ++ + ++ + ++GG + Sbjct: 199 SALGYDVRLLKLAAFVISGAVTGLAGGLHAMMTGVAPLSNIEYHTSEAILVMTVIGGTGN 258 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR-HTTLMVIALFLVILMR 335 L + + V + + L + ++ L +A+ ++ +R Sbjct: 259 LFASVLGASFYVLVGNWLSTLWPRWLMLLGLLLIAVSLYMQKGLFGLAMKIIDAVR 314 >gi|110669468|ref|YP_659279.1| ABC-type urea transport system, permease protein II [Haloquadratum walsbyi DSM 16790] gi|109627215|emb|CAJ53705.1| ABC-type urea transport system, permease protein II [Haloquadratum walsbyi DSM 16790] Length = 396 Score = 92.2 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 114/324 (35%), Gaps = 15/324 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A LL L + Y L Y + LSI+ G G+LS V + I Sbjct: 33 AAFGVGLLLLVVQPLIRGSYAAGQFSLFLAYGLLGLSLSIIWGYTGILSFGQVAFFGIAG 92 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y I+ G ++ + + I+ A L F G + I++ + +L Sbjct: 93 YTYAIVSLNLGGALGPTVALPVAIAVATISAFILGYFMFYGGVRNVYVAILTLVVTLVLE 152 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF-PSSFVIYEIFMYYVLLGMCFLSASI 197 + T G + +L SSF + Y+ +L + + Sbjct: 153 TFMAQTAGAKWAIGSVKLGGFNGIPGIRNFTLGVGESSFSLSGSEFYWFVLAVLLFAYLG 212 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L + + IR++++ L + KL+ F S A G++G F+A + + Sbjct: 213 SRILVNSKYGYSLVAIREDEERTAMLGYNVKKVKLAVFTFSGALAGLSGIFYANWGNYMD 272 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P +F + I I V LGG SL T I+ + + F + + Sbjct: 273 PSVFTITFATIPIVWVTLGGRESLLGAIVGTVIIEWLRKW--------------FSINAS 318 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + + L + IL +L Sbjct: 319 EFAIVFVGLILMITILFIPRGILP 342 >gi|260888352|ref|ZP_05899615.1| amino acid ABC transporter, permease protein [Selenomonas sputigena ATCC 35185] gi|330838329|ref|YP_004412909.1| ABC-type transporter, integral membrane subunit [Selenomonas sputigena ATCC 35185] gi|260861888|gb|EEX76388.1| amino acid ABC transporter, permease protein [Selenomonas sputigena ATCC 35185] gi|329746093|gb|AEB99449.1| ABC-type transporter, integral membrane subunit [Selenomonas sputigena ATCC 35185] Length = 317 Score = 92.2 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 135/343 (39%), Gaps = 41/343 (11%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + L K D I L ++ +L + + + + I ++ L+++ G G Sbjct: 1 MNLRKQDLIFFLFGLILFAVLQGLITGRVIGSFWQLNLLFLGINIILTASLNLINGYTGQ 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 SL A+GAY+ IL + + + L + A+ + G+++GLP+L+ RGDYLAIA Sbjct: 61 FSLGHAGFMAVGAYAAAILTTNFHVPFPLALLAGAIAAAFLGVLIGLPTLRLRGDYLAIA 120 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL + EI + +LI + G AG R + Sbjct: 121 TLGLGEIIRVVLINIDYV-GGAAGFKGIARDTN-------------------------FA 154 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + F++ I + A IR+++ A ++ K+ AFA+ + F G+ Sbjct: 155 WVFFAVFVTLFFIKNFVNSTHGRACIAIREDEIAAEAMGIPTTRYKVMAFAIGAGFAGLG 214 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G FA + ++P F F ++ + +V+LGGM SL+ + + Sbjct: 215 GGLFAHTLTYLNPTSFTFMQSFFFLIMVVLGGMGSLTGSVVGAFFVTILQAALAS----- 269 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + +AL L +L R + + F Sbjct: 270 ----------WPEFRMIIFAVALILFMLYRPKGIFGYVELTAF 302 >gi|260222936|emb|CBA33001.1| hypothetical protein Csp_B16850 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 327 Score = 92.2 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 30/310 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y + L++V+ GL++ VG G SL + IGAY+ IL Sbjct: 20 PPFLKNYGIYLLSYWLVFVIATMGLNLTVGYAGQKSLGHAAFFGIGAYTVAILMKAGFS- 78 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 WL +P +A+I G+ +G P+L+ + YLA ATL + ++ + +T G GI Sbjct: 79 FWLGLPAAALICFFVGIALGFPALRVQTIYLAFATLGFNTAVWLVMRNEEWLTGGTFGIN 138 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 R G ++ + YY +LG + ++ L R+ A+ Sbjct: 139 NIARPSLFGYSLEGN--------------LAYYYFVLGTAVVLGALQWGLLRSPWGKAFT 184 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RDN SL L +FA+ + + G+AGA FA+ I P F +I++ Sbjct: 185 ALRDNPIRAESLGINTRSYTLLSFAIGAVYAGVAGALFASLVQFIEPAPFTVGASIMMYL 244 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V++GG +A+ + + E + + A+ L+ Sbjct: 245 MVVVGGPGYFLGPLLGSAVGVILPEWLRF---------------AQAWYLFVFGSAVVLL 289 Query: 332 ILMRSHSLLR 341 ++ LL Sbjct: 290 MIWLPDGLLS 299 >gi|167750013|ref|ZP_02422140.1| hypothetical protein EUBSIR_00981 [Eubacterium siraeum DSM 15702] gi|167657034|gb|EDS01164.1| hypothetical protein EUBSIR_00981 [Eubacterium siraeum DSM 15702] gi|291557910|emb|CBL35027.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Eubacterium siraeum V10Sc8a] Length = 293 Score = 92.2 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 102/307 (33%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + IY + A G ++V G +L+ +G Y + + ++ +L + Sbjct: 5 NNLINGISLGSIYAVIALGYTLVYGIAKMLNFAHGDVIMVGGYVIFYSMTSFSINPYLSV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ ++ G+++ + K +++ LI + L + G+ + + Sbjct: 65 LIAVIVCTVLGIVIEKVAYKPLRQATSLSVLITAIGVSYFLQNSALLLFGEKPVNFTSVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++ V+ ++ + + L++ +T A + ++ Sbjct: 125 NVPSISLFD---------GQVVITGEAIVAIVVSILIVIGLSLFINKTKSGRAMLAVSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + I FA+ S +AGA ++ + I + G Sbjct: 176 KDAAQLMGININRTISLTFAIGSGLAAIAGALLCSAYPTLQNTT-GAMPGIKAFVAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ ++ + L + ++ L LV++++ Sbjct: 235 GIGSVPGAMIGGILIGVIEILGRAYISPQLSDA-------------IVFAVLILVLIIKP 281 Query: 337 HSLLRLR 343 +L + Sbjct: 282 TGILGKK 288 >gi|219670919|ref|YP_002461354.1| inner-membrane translocator [Desulfitobacterium hafniense DCB-2] gi|219541179|gb|ACL22918.1| inner-membrane translocator [Desulfitobacterium hafniense DCB-2] Length = 358 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 82/335 (24%), Positives = 139/335 (41%), Gaps = 23/335 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + + L +V L++ L + + + I YV+ A L++ VG LG L Sbjct: 6 KTTRNNLYTYALVIVAYLIVQLLISGGNISSSLQGQLVPICAYVILAISLNLTVGILGEL 65 Query: 67 SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119 SL +IGA++ V+ + + + V A+ +G G ++G+P L+ +G Sbjct: 66 SLGHAGFMSIGAFAGVVACISLEQIIPITILRLIVSLIVGALFAGVAGFLIGIPVLRLKG 125 Query: 120 DYLAIATLIMSEIFQNILIKW-KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 DYLAI TL EI +NI+ + I L + I Sbjct: 126 DYLAIVTLAFGEIIKNIINILYVGLDKAGLHISFLSDSNALNLGEGGRVIIDGPLGITGI 185 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 ++ + + + ++ I+L L + A +RDN+ A S+ I KL AF S Sbjct: 186 PKLSTFTIGFVLILITLFIVLNLVDSRSGRAIMALRDNRIAAESVGIHITKYKLMAFVTS 245 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 +A G AG FA + I F F+ +I+++ V+LGG+ ++ A +L + EL Sbjct: 246 AALAGAAGTLFAMNYSTIIASKFGFNTSILILVFVVLGGLGNIRGSIIAATLLTILPELL 305 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 N Y L I L L++L Sbjct: 306 REFNSY---------------RMLLYAIVLILIML 325 >gi|326790026|ref|YP_004307847.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM 5427] gi|326540790|gb|ADZ82649.1| ABC-type transporter, integral membrane subunit [Clostridium lentocellum DSM 5427] Length = 328 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 77/331 (23%), Positives = 153/331 (46%), Gaps = 45/331 (13%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 ++K + I + A+ L+F+ + ++ S+ + I + ++ A L++ VG LG L+ Sbjct: 5 IHKKNIIAIVTAIAVYALVFMLVETGSLSRHYQSLLVPIGVNIILAVSLNLTVGFLGELT 64 Query: 68 LNCVIAYAIGAYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 L ++GAY+ + + + + + + +++ G I+G+P+L+ +GDYLA Sbjct: 65 LGHAGFMSVGAYAGCMFTIYANLPTYIELPIALIIGGLVAAVFGCIIGIPALRLKGDYLA 124 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 I TL EI ++IL+ + +T G G+ D+ Sbjct: 125 IVTLAFGEIIRSILMNIE-VTGGAGGLKGIDKSAN------------------------- 158 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y ++ + ++ II L + A +IRDN A S+ +++ KL AF V++ F G Sbjct: 159 YTLVFVIIVITVIIISNLVNSRAGRAICSIRDNIIAAESVGINVVYHKLLAFVVAAFFAG 218 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 AG + + + PD F F+++I ++ IV+LGGM S+ A I+ + E+ G+ Sbjct: 219 AAGVLYGHNLGILKPDTFDFNKSIEILVIVVLGGMGSIRGSIIAATIITVLPEVLRGLAD 278 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 Y + + L +++++ Sbjct: 279 Y---------------RMLIYAVVLIVMMIL 294 >gi|167580888|ref|ZP_02373762.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis TXDOH] Length = 570 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + + Sbjct: 296 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPASFLAAAALGVV 355 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + S + + Sbjct: 356 LER--TVLRHLYGRPLETLLATFGVSLILIQATRTIFGAQNVQVVNPSWMSGGVTVMQNL 413 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 414 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 473 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ ++ L V + Sbjct: 474 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 531 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 532 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 569 >gi|111222262|ref|YP_713056.1| high-affinity branched-chain amino acid transport ATP-binding protein [Frankia alni ACN14a] gi|111149794|emb|CAJ61487.1| High-affinity branched-chain amino acid transport ATP-binding protein; putative membrane protein [Frankia alni ACN14a] Length = 982 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 121/319 (37%), Gaps = 18/319 (5%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + ++ I + L +V G +G +SL + + + + Sbjct: 366 YVANDSYRGALMETFIAGVLGLSLVVVTGYVGQVSLAQLTLAGAAGFLLSTFSHAWHIPF 425 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + ++A+ + G++ GLP+L+ RG +A+ TL ++ + + + + G G + Sbjct: 426 PISPILAALGATVIGVLAGLPALRIRGMLVAVVTLTLAVALEALWFRNNDLNGGTGGAPI 485 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 A+ F + + L + A + LRR+ + +A Sbjct: 486 ANPSIFGLDL--------GIGTGKAFPRPEFGLLCLAVLTAVAIGVAHLRRSRLGSAMLA 537 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 +R ++++ + +++ KL FA++S G+AG A + ++ F + V + Sbjct: 538 VRADERSAAAAGISVVRVKLLGFAIASFIAGLAGCLTAYKQTTVTFTSFSALLGLSVFTT 597 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V L G+TS+S A A+ IG F L + + + L LV+ Sbjct: 598 VFLAGITSVSGGLLAGALGIG----------GVFYVFLSRTIDIGEWYGIVSGLGLILVV 647 Query: 333 LMRSHSLLRLRTPSNFLER 351 + ++ + R Sbjct: 648 IRNPDGIVGPAHLAAEKRR 666 Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 94/279 (33%), Gaps = 11/279 (3%) Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G+L+ AY+Y +L L +P + +SG G+ + L Sbjct: 57 SGVLNFGTGALSLHAAYTYALLRDGKILVPVPGLPETIGLSGPVGLWPAILITVLFEAAL 116 Query: 123 AI--ATLIMSEIFQNILIKWKPITNGKAGIY---VADRLYFLGTTVRSLIRFFRFPSSFV 177 + L+ + ++ + + G G++ + ++ V ++ + + V Sbjct: 117 GVLLYVLVFRPLRAHLAVAKAVASLGLMGLFTGVITMQVGGDQILVAPILPRRTWEAGGV 176 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 ++ + + ++A + R T A R + + + L+ +A+ Sbjct: 177 SLLSDRFWFVAVILLIAAVLAAVYRFTRFGTATRAAAETEIGALVSGLSPDLIALANWAI 236 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+A G+AG A + + ++ +LG T L+ + + Sbjct: 237 SAAVAGIAGILIAPLVPLV--PGTYTLFIVPALAAAVLGRFTLLAPAVLGGIGIGALQ-- 292 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 Y + F S L+++ LVI R Sbjct: 293 --SEAVYLQSRADWFPSSGVAELIPLVIVLAVLVIQGRP 329 >gi|182416035|ref|YP_001821101.1| urea ABC transporter, permease protein UrtB [Opitutus terrae PB90-1] gi|177843249|gb|ACB77501.1| urea ABC transporter, permease protein UrtB [Opitutus terrae PB90-1] Length = 551 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 109/320 (34%), Gaps = 28/320 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I ++ A GL+I G +G++++ A+GAY+ ++ + +G + L ++ Sbjct: 245 LSLGSILLVVALGLAITFGLMGVINMAHGEMIAVGAYTTYVVQNLFGAGLALSPFGWSIS 304 Query: 103 SGACGMIMGL-------PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 A+ L+ + + + + G+ + + Sbjct: 305 LPGLNAQGWRYEGYFLLALPLSFLAAAAMGLLLERGVIRFLYRRPLESLLATWGVSLVLQ 364 Query: 156 LYFLGTTVRSLIRFFR-------FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 F + ++ + + +I+ +V+ + + L L RT++ Sbjct: 365 QLFRRVFGSNNVQVSSPAFLSGNWTFNDIIFGWNRVFVIGFAGVIVLGVWLVLTRTSLGL 424 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 R + N+ L ++ FA+ S G+AGAF + + S + Sbjct: 425 LIRAVMQNRAMAACLGVRTERVNMATFALGSGLAGLAGAFLSQIGNV--GPSLGQSYIVD 482 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 V++GG+ +L+ A + + + + ++IA+ Sbjct: 483 SFMTVVVGGVGNLAGTVLAALGIGMSDQTLQQL------------LLNPVLGKITVLIAI 530 Query: 329 FLVILMRSHSLLRLRTPSNF 348 L + R + R+ S Sbjct: 531 ILFLQWRPAGIFVTRSRSLE 550 >gi|110597478|ref|ZP_01385765.1| inner-membrane translocator [Chlorobium ferrooxidans DSM 13031] gi|110341022|gb|EAT59493.1| inner-membrane translocator [Chlorobium ferrooxidans DSM 13031] Length = 332 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 65/343 (18%), Positives = 132/343 (38%), Gaps = 28/343 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 ++A+ L L + YI + I +L+ + +I+ G G S + Sbjct: 4 ALIIALFAAFTALLPLFIGEENPYIIGIMISVLMMAALSSAWNIIGGFAGQFSFGHAAYF 63 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 GAY+ +IL + L+ + +++ +I G RG Y A+A++ ++EI + Sbjct: 64 GAGAYTTLILIYSFELNPLIGAAAGMVVAALIALITGSIVFGLRGHYFALASIAVAEIIR 123 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ T G GI +A+ + + YY +L + ++ Sbjct: 124 LSVLNFE-FTGGAQGILLAN---------------VTLWGLDLNSKTPFYYGMLLLLVVT 167 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ +LR++ + IR++Q A SL + K A +S+ +AG+ +A Sbjct: 168 LTVTEYLRKSKTGYYLQAIREDQDAASSLGINLALYKNRALLISALLTSVAGSLYALYIR 227 Query: 255 RISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC-----------GMN 302 I +I +I I+GG+ +L +L+ + E G+ Sbjct: 228 FIDTSAVLDLRLSIEIILTAIIGGVGTLWGPVLGALLLVPLAEALRSNMIGDALVKLGLV 287 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + + + H + I L IL +L L Sbjct: 288 SETSSVGIFLNDNLAHAHVLVYGIITVLCILYLPKGILGLFRR 330 >gi|160881654|ref|YP_001560622.1| inner-membrane translocator [Clostridium phytofermentans ISDg] gi|160430320|gb|ABX43883.1| inner-membrane translocator [Clostridium phytofermentans ISDg] Length = 333 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 47/340 (13%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGAT-KSQKYIDSMGIQILIYVMFAWGLSIV 59 M R N + ++ A++ + F+ + + S+ +I I ++ A LSI Sbjct: 1 MEKNKKRRNLINAVIAFAAIILGYMAVYFMMEGNILSRQMTSLIPRIGINIILAVSLSIT 60 Query: 60 VGSLGLLSLNCVIAYAIGAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPS 114 VG LG LSL AIGAYS I ++ LS + + + +++ G+I G+P Sbjct: 61 VGLLGELSLGHAGFMAIGAYSSAIFTTQAVGLPGFLSFIIALLIGGIMAALFGVITGIPV 120 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 L+ RGDYLAI TL +EI ++I I IT G G+ Sbjct: 121 LRLRGDYLAIVTLAFTEIIRSI-INSMSITGGAMGLSKIP-------------------- 159 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + Y + L+ + + L+ + A ++R+N A ++ + K+ A Sbjct: 160 -----DYANYTWIYIFGILTILVAVNLKNSRHGRAILSVRENYVAAEAMGIPVTKFKILA 214 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F +++ F G+AGA +A + + P+ F ++++I ++ V+LGGM ++ AT +L + Sbjct: 215 FTIAAFFAGIAGALYAHTYSVLRPNSFDYNKSIDILIFVVLGGMGNIPGTIVATILLTYL 274 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 E Y +AL +++++ Sbjct: 275 PEKFREFGDY---------------RMLTYALALIIIMIL 299 >gi|120613379|ref|YP_973057.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120591843|gb|ABM35283.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax citrulli AAC00-1] Length = 331 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 114/265 (43%), Gaps = 9/265 (3%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 S+ ++LIY + A G ++++G GLLS I + +G+Y+ + +R+ L + + + ++ Sbjct: 28 SLASEVLIYGLAAMGCNLLLGHTGLLSFGQGIFFGLGSYTIALTLTRWPLPMPVALALAV 87 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + ++G +++ RG Y + TL +++F + +T G G+ R Sbjct: 88 VAGAVGAALVGWVAIRQRGTYFVMLTLAFAQMFYFLAYSMPSLTGGDNGLMDIPRPS--- 144 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + F + Y + + ++ ++ + + +RDN++ Sbjct: 145 ------LAVGGFTLWPLASPWQYYGFVAVVFLVAFWLLQQVSASVFGRTLLAVRDNEERA 198 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + KL AF +S A G+AGA A ++ + +++ + ++GG + Sbjct: 199 GAIGYDLKLLKLQAFVISGAVTGLAGALHAMMTGIAPLASAEYHTSEMILVMTVIGGTGT 258 Query: 281 LSKIAKATAILIGVVELCCGMNFYY 305 L +A + V + + + Sbjct: 259 LLASLLGSAFYLIVGDWLSTLWPRW 283 >gi|307947499|ref|ZP_07662832.1| high-affinity branched-chain amino acid transport system permease protein BraE [Roseibium sp. TrichSKD4] gi|307769317|gb|EFO28545.1| high-affinity branched-chain amino acid transport system permease protein BraE [Roseibium sp. TrichSKD4] Length = 324 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 23/270 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88 Y MGI I IY + A GL++ G GL + +A+GAY+ IL S + Sbjct: 8 NYALFMGIFIGIYALLALGLNVQWGFAGLFNAGIAGFFAVGAYTSAILTSAAADGRIGGF 67 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L + + +GA +G L+FR DYLAIAT+ ++EI + ++ + +TN Sbjct: 68 DLPFIFGWVAAMIAAGAIAWPIGKICLRFRSDYLAIATIGVAEIIRLVIKSEETLTNSAR 127 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 GI R + V S +++ + L ++ + Sbjct: 128 GITGLPRPFGDLPYVESQ--------------AAYLAIVILVLALIYFLVQRQFNSPWGR 173 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE-NI 267 R IRDN+ A ++ I + +L AF +A +G+AGA FA I+P+ Sbjct: 174 MMRAIRDNELAARAMGKDIEYRRLEAFIFGAAIMGLAGAMFAHFNRSITPEAIDPMVATF 233 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVEL 297 +V ++ILGG + A++ + + Sbjct: 234 LVWIMLILGGSGNNKGAILGAAVVWIIWSV 263 >gi|114764780|ref|ZP_01443963.1| branched amino acid ABC transporter (permease) [Pelagibaca bermudensis HTCC2601] gi|114542829|gb|EAU45851.1| branched amino acid ABC transporter (permease) [Roseovarius sp. HTCC2601] Length = 291 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 130/307 (42%), Gaps = 21/307 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 YI ++ I IY + A L+ ++G G+ SL + + +GAY+ + SI L I Sbjct: 3 AYIFNLVNLIAIYAILAVTLNFIMGYAGIYSLAHAVFFGLGAYTSAWVAQNVHPSILLTI 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + M + A +++ LP+L+ RG+Y A+L + + I +WK T G G+ Sbjct: 63 PAAMMAAAALSLLLALPALRVRGEYFVAASLGLQVLAVTIFSEWKSFTGGIGGVLAIPPA 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G V F + + + ++I L ++ R I D+ Sbjct: 123 NVFGIEVFKPAHF--------------AILSVVALVIVMALINALVHSSFGRNLRAIHDS 168 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A S + K + +S+A +AGA +A+ I+ + F +++V+++VI+G Sbjct: 169 ESAAASFGKNVPMIKTISVVISAALAAVAGALYASYLSFINVESFTLDASVLVMAMVIIG 228 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G +++ A+L+ + L + + + + L+++ R Sbjct: 229 GTGTVAGPIVGAALLMLLPSLISWFD-------FLPQTEIGALQQIIYGLGMTLLMIFRP 281 Query: 337 HSLLRLR 343 ++ R Sbjct: 282 GGIVGRR 288 >gi|83310576|ref|YP_420840.1| branched chain amino acid ABC transporter [Magnetospirillum magneticum AMB-1] gi|82945417|dbj|BAE50281.1| Branched-chain amino acid ABC-type transport system [Magnetospirillum magneticum AMB-1] Length = 618 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 125/322 (38%), Gaps = 33/322 (10%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V + L+ L Y S+ ++LI+ +FA L ++G+ G++S + +G+Y Sbjct: 314 VAFAGLVVLLALPMVGGSYGLSVASEVLIFALFAASLHFMMGTGGMVSFGHAAYFGLGSY 373 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 ++ +G+ + + +++ A ++ G ++ G YLA+ TL ++I ++ + Sbjct: 374 GAALMVKYFGIPMLAALVTGPLLAAAAALVFGWFCVRLAGAYLAMLTLAFAQIAYAVVFQ 433 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W T G G+ + + YY+ L +C + Sbjct: 434 WSSFTGGDNGLIGIWPAPW------------------AANPVAFYYLTLALCGGGILAVR 475 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + R RD+ S+ + + + FA++ F G+AG+ +A + + PD Sbjct: 476 RITFAPFGYTLRACRDSALRADSIGINLSSHRWAGFALAGFFAGIAGSLYAFLKGSVFPD 535 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + ++ + +V+LGG+ +L+ + + + + Sbjct: 536 TISIATSVDGLVMVLLGGVQTLTGPVVGALVYKTLHVTISSYTDQWRTA----------- 584 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 + + + ++++ + Sbjct: 585 ----LGVIIIVLVVAFPQGISG 602 Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 91/303 (30%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + A GLSI+ G +++ Y +GAY L + Sbjct: 8 FLNGLASASSLFLVASGLSIIFGVSRIVNFAHGSFYMLGAYMAFTLVQKLSGGTVFGFWG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ A ++G + A ++ L+ + + + Sbjct: 68 AIVLAAAAVALVGAVVEMVLLRRIYQAPELLQ------LLATFGLVLIVQDLVLVLWGPE 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R+ + + + +++ + + L RT R +++ Sbjct: 122 DLLGPRAPGLKGAIDIFGQSFPQYDFVLIILGPVVLGLLWLLFHRTRWGTLIRAATQDRE 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L + S F + + G+ GA + IV++GG+ Sbjct: 182 MVAALGVNQAWLFTSVFTLGAFLAGLGGAVQLPR--EAVNHVMDLQIITEAFVIVVIGGL 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A I+ + + F L + + +++++R Sbjct: 240 GSVLGAFLAAVIIGELNAFGILI--------------FPQLTLVLTFLVMAVILVVRPWG 285 Query: 339 LLR 341 LL Sbjct: 286 LLG 288 >gi|171318303|ref|ZP_02907463.1| urea ABC transporter, permease protein UrtB [Burkholderia ambifaria MEX-5] gi|171096505|gb|EDT41402.1| urea ABC transporter, permease protein UrtB [Burkholderia ambifaria MEX-5] Length = 539 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 77/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPAAFDWYPLVAVPVSFAAAALVGIV 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L V + Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538 >gi|121583468|ref|YP_973899.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120596722|gb|ABM40157.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] Length = 340 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 124/325 (38%), Gaps = 18/325 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L+ L S Y M +++I +FA L ++ G GL+SL + + Sbjct: 17 LALMMGLVALAAFPFVSGDYYTEMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAYFGLAG 76 Query: 79 YSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ L +++W +P++ + SG +I+G ++ RG Y + T+ +++ + Sbjct: 77 YALAFLTPESEPVNLWWSLPLAVLASGLAALIVGFFVVRTRGIYFIMVTMAFAQMIYFLF 136 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + L + + F + + ++ MYY L + + Sbjct: 137 HDNDSLGGSDG----------LYVNFKPIATLFGWTPFDLDSKVTMYYFTLVLVVAVYAF 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + A IR N+ ++ + KL+AF ++ A G+AG ++ Sbjct: 187 LRCVLWSPFGRALAGIRVNEHRMRAMGFGTVGYKLTAFTLAGALAGLAGYLTGVQSGYVN 246 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P++ F + I +VILGGM + + ++ + + Sbjct: 247 PELMGFHMSAHAIMMVILGGMGNFAGAIVGAFAFEYLLHVFKELPQVG-------SVDLG 299 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 M I + ++++ LL L Sbjct: 300 KHWQLWMGIFIVGLVVLAPRGLLGL 324 >gi|298241069|ref|ZP_06964876.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963] gi|297554123|gb|EFH87987.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963] Length = 353 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 65/335 (19%), Positives = 129/335 (38%), Gaps = 33/335 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +I + L+ S + ++ + LI+ + G +I+ G G ++L Sbjct: 1 MRIATFVGGGILLVFACAFPLLFSDPTVTTIAVFTLIFAVATSGWNILAGYTGYIALGHA 60 Query: 72 IAYAIGAYSYVILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + +GAY+ IL + +LL+P++ +I+ + +G +L+ R + T+ Sbjct: 61 AYFGLGAYTLAILCQDWHIAGGYEPFLLVPLAGVIAALIAIPLGWIALRVRRHTFVVITI 120 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M I Q + +T G G+ + L + + I YYV Sbjct: 121 AMFFIIQLLAFNLSWLTKGSTGLSLPIPLDW----------------GGDFFNIPFYYVT 164 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + L+ +I +R + IRD++ L +KL AFA+++ +GMAGA Sbjct: 165 LALLLLTLTISWGVRHSKYGLGLLAIRDDEDRALGLGVKTGISKLLAFALAALIVGMAGA 224 Query: 248 FFAASRDRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A + + P F +I + + LGG+ +++ IL + Sbjct: 225 IWAYFVEAVYPATAFDPMFDIAIALMAFLGGLGTITGPLLGALILEPTQQYF-------- 276 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 N + + +VIL+ ++ Sbjct: 277 ----ALAYGQNGYYLIVYGALFLVVILLLPQGIVP 307 >gi|302669706|ref|YP_003829666.1| branched-chain amino acid ABC transporter permease LivM [Butyrivibrio proteoclasticus B316] gi|302394179|gb|ADL33084.1| branched-chain amino acid ABC transporter permease protein LivM [Butyrivibrio proteoclasticus B316] Length = 350 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 65/337 (19%), Positives = 129/337 (38%), Gaps = 23/337 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + + + I + + ++ ++ + + + Y + A L++ VG LG Sbjct: 4 TKKTRDNFITYGIVIASYIVFQTLASTGNLSSHMKGLLVPMTYYAVIAVALNLCVGILGE 63 Query: 66 LSLNCVIAYAIGAYSYVILGS------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 LS+ IGA++ L + ++ G ++G+P L+ +G Sbjct: 64 LSIGHCGFMCIGAFTSAFFSKVTEEGIPTVPRFILAFVIGIAMAALFGFLIGIPVLRLKG 123 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +N++ + + K + LG + Sbjct: 124 DYLAIVTLAFGEIIKNVINAFYIGVDSKGVHFSLKNSMELGLEPDGQLIVNGAMGITGTP 183 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + V + + L+ ++ L + A +RDN A + + K+ AF +S+ Sbjct: 184 HNSSFTVGIVVLILALFVVQNLVNSRDGRAIMAVRDNYIAAEATGINVTKYKMMAFVISA 243 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAILIGVVEL 297 A G AG F+ + ++ F N I+++ V+LGG+ ++ A IL + EL Sbjct: 244 AIAGAAGVLFSHNITTLTATSQYFGYNASIMILVYVVLGGIGNIRGSVIAACILYLLPEL 303 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 G + Y + I L ++++ Sbjct: 304 LRGFSNY---------------RMLIYSIVLIVMMIY 325 >gi|187930599|ref|YP_001901086.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|187727489|gb|ACD28654.1| inner-membrane translocator [Ralstonia pickettii 12J] Length = 334 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 131/324 (40%), Gaps = 16/324 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+Y LLL + A Y + ++L + +FA ++++G GLLS + Y Sbjct: 16 VLYGLLLVALIAAPLVGAYPVFVA-KLLCFALFASAFNLLLGYTGLLSFGHAAFFGGAGY 74 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + ++ L + G+I+GL +++ +G Y A+ TL ++++ ++ Sbjct: 75 VAGYMMRDLHVTPELGLLAGTAAGAFIGLIVGLLAIRRQGIYFAMITLALAQMLYFFCLQ 134 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 P T G+ G+ R F + ++ +YYV+L + L+ +I+ Sbjct: 135 -VPFTGGEDGLQGVPR-------------GKLFGVLDLSSDLTLYYVVLAIVVLAFLLIV 180 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + I++N+ SL KL AF +S+A G+AG+ + Sbjct: 181 RTIHSPFGQILKAIKENEPRATSLGYDTDRFKLLAFVLSAALTGLAGSLKTLVLGFETLT 240 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FNM 318 +S + VI + ++GG+ LS A++I + + + + + Sbjct: 241 DVHWSMSGSVILMTLVGGLGILSGPLLGAALVIALENKLGDIGSFLAGATGIDGFNILGE 300 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 TT+ + +L ++ Sbjct: 301 SVTTVTGAIFVICVLTFRRGIMGE 324 >gi|302870043|ref|YP_003838680.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029] gi|302572902|gb|ADL49104.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029] Length = 369 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 107/321 (33%), Gaps = 13/321 (4%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L + + L++ A G ++ G G+LS + +A G Y IL Sbjct: 49 LPGIFEGPLNSPGTLQLLAICLVFGGLAAGYDLLFGRTGMLSFGHALYFAAGVYGTDILV 108 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 ++ GL +W ++ + ++G +L+ G A+ TL +++ ++ + Sbjct: 109 TKAGLPLWQAAVLTVIGGTTLAALLGAVALRTVGIAFAMVTLAFAQVGAILVAR------ 162 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 L + + V + +Y++ L + ++ + + Sbjct: 163 ------DFGGLTGGEEGLPLDVSGLPSALVGVTNTVNLYWLALAYLAIVVLVVHRVSASP 216 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 +RD+++ L KL AF ++ G + SP + Sbjct: 217 TGRVLAGLRDDERRIGVLGLDPYRFKLVAFTLAGGLASAGGVVYVLIVGGASPHITSSEL 276 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY-YFNSLLKFDCSFNMRHTTLM 324 + ++ +V+LGG + + + + NSL F + ++ Sbjct: 277 TLSLLVMVVLGGPGTRWGPVLGGVLYMYLDHRLTAFGSSDAVNSLPAFLSHPLSQPLFVL 336 Query: 325 VIALFLVILMRSHSLLRLRTP 345 L + L LR+ Sbjct: 337 GTVFILAVYFFPGGLASLRSR 357 >gi|146321403|ref|YP_001201114.1| branched-chain amino acid ABC transporter permease [Streptococcus suis 98HAH33] gi|223933324|ref|ZP_03625312.1| inner-membrane translocator [Streptococcus suis 89/1591] gi|253752243|ref|YP_003025384.1| branched-chain amino acid transport system permease protein [Streptococcus suis SC84] gi|253754069|ref|YP_003027210.1| branched-chain amino acid ABC transporter permease [Streptococcus suis P1/7] gi|253756003|ref|YP_003029143.1| branched-chain amino acid transport system permease protein [Streptococcus suis BM407] gi|330833173|ref|YP_004401998.1| branched-chain amino acid ABC transporter permease [Streptococcus suis ST3] gi|145692209|gb|ABP92714.1| ABC-type branched-chain amino acid transport system, permease component [Streptococcus suis 98HAH33] gi|223897974|gb|EEF64347.1| inner-membrane translocator [Streptococcus suis 89/1591] gi|251816532|emb|CAZ52168.1| branched-chain amino acid transport system permease protein [Streptococcus suis SC84] gi|251818467|emb|CAZ56296.1| branched-chain amino acid transport system permease protein [Streptococcus suis BM407] gi|251820315|emb|CAR46832.1| branched-chain amino acid transport system permease protein [Streptococcus suis P1/7] gi|319758632|gb|ADV70574.1| ABC-type branched-chain amino acid transport system, permease component [Streptococcus suis JS14] gi|329307396|gb|AEB81812.1| ABC-type branched-chain amino acid transport system, permease component [Streptococcus suis ST3] Length = 315 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 142/340 (41%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + I + + L+ + A Y + QI I ++ A GL+++VG G SL Sbjct: 6 KVNAIWLAILLAGFGLIQGLVSAGILNFYYIQIVQQIGIQIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I + + V +ISGA +++G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVGILGKMMPTYGGFAIALIVGMLISGAVALLVGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++EI + ++I +TNG AGI ++ Sbjct: 126 GVAEIIRILIINGGSVTNGAAGIMSIPLFTSWP-------------------------LV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + + R+ + A ++R+++ A S+ F K+SAF + +AG Sbjct: 161 YIFVIITTLVTVNFLRSPMGRATISVREDEIAAESVGVNPTFVKVSAFVFGAMTAAIAGG 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A I P F F ++ V+ I++LGG+ S++ A +L + Sbjct: 221 LHAGYVGTIVPKDFAFMTSVNVLIIIVLGGLGSITGTFVAAIVLGILNVFLKSY------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL L+++ R LL + S Sbjct: 275 ---------SDISMIIYSLALILLMIFRPGGLLGTKEFSV 305 >gi|169830084|ref|YP_001700242.1| high-affinity branched-chain amino acid transport system permease [Lysinibacillus sphaericus C3-41] gi|168994572|gb|ACA42112.1| High-affinity branched-chain amino acid transport system permease protein [Lysinibacillus sphaericus C3-41] Length = 315 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 141/345 (40%), Gaps = 42/345 (12%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ +K +LA+V ++ L + Y +M I + I +M A L IV+G G Sbjct: 5 MKKSKVFWGYAVLALVIYAVVQLLIMTEVIDMYYKNMLITMCINIMLAVSLHIVIGVTGQ 64 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 S+ A+GAY I+ ++ L + I + A+ + G+I+G+P+L+ +GDYLAIA Sbjct: 65 FSIGHAGFLAVGAYVSAIITTKLMLPFPMAILLGAVAAAVAGLIVGIPTLRLKGDYLAIA 124 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL +EI + I + + + + Sbjct: 125 TLGFAEIIRIIFLNTDYVGGAAGMQVKY---------------------------LSNWT 157 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 L+ +I + A +IR+++ A ++ + K+ AFA+ S F G+A Sbjct: 158 YAFFGVVLTILVISNFTNSRHGRACISIREDEIAADAMGINTTYYKVVAFAIGSFFAGLA 217 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA FA + I P F F ++ ++ V+LGG+ SLS A L V Sbjct: 218 GAIFAHNFYIIQPTTFGFLKSFDILIYVVLGGLGSLSGSVIAAVFLTIVSTYLANF---- 273 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L +V+L R L+ + ++ + Sbjct: 274 -----------PETRMIIYSLVLIIVMLYRPTGLMGTKEITDLFK 307 >gi|170741994|ref|YP_001770649.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168196268|gb|ACA18215.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 295 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 70/305 (22%), Positives = 118/305 (38%), Gaps = 17/305 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 YI ++ I IYV+ A GL++ G G+ + V + IGAY+ +L Sbjct: 3 AYIIAILIISGIYVLLALGLNLQYGLTGITNFGHVGFFCIGAYTAALLSQVSVPWP-FAF 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 A ++ +GL SLK R DY AI +L SE+ + ++ K +T G GI +L Sbjct: 62 LAGAALAALAAWPLGLISLKLRDDYFAIVSLGFSEVVRIVVTSEKWLTKGVQGITGIPKL 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + T + V + + R+ IRDN Sbjct: 122 FAFLGTGTAQALAVLLLLVAVNMLAGLSKS-------------RIVRSPFGRMIEAIRDN 168 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++A +L K+ + +A G+AG F+A I P+ F + +I+G Sbjct: 169 EEAVKALGKDPSTFKIQVLMLGAALAGIAGGFYAHYIGYIVPEQFIPLITFYIWMAIIIG 228 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +S T IL+ +E + + + ++ +AL L L R Sbjct: 229 GVGPISGALVGTLILMFFLEGSRFLRGFI---PFVSEVEMASIRLGVIGLALVLFTLYRP 285 Query: 337 HSLLR 341 L+ Sbjct: 286 QGLMG 290 >gi|317121420|ref|YP_004101423.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter marianensis DSM 12885] gi|315591400|gb|ADU50696.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Thermaerobacter marianensis DSM 12885] Length = 370 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 84/329 (25%), Positives = 146/329 (44%), Gaps = 30/329 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L A V L+ F Y +G ++ M L+ ++G G +L +A Sbjct: 18 LAAGVALLVALAFPALVGFNAYYLEIGFNFFLWAMLGLSLNFILGGTGQYNLGHAAFFAA 77 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ IL ++ + + +L+PV+A ++G + + P + RGDYL I T+ +EI + Sbjct: 78 GAYTTAILNTKLDIPVLVLLPVAAAVAGLLAVAVARPIVHLRGDYLLIVTVGFAEIVRIT 137 Query: 137 L-IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L IT G GI DR LG + ++ F+ F++ Sbjct: 138 LRNNVFGITGGSNGILGIDRPVILGLRLADMVHFYYLSLLFLLVT--------------V 183 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +I + L + + AW IR+++ A ++ KL AFAV A G AG +AA Sbjct: 184 AIAVRLENSRVGRAWSYIREDEVAAAAMGIDTARYKLLAFAVGGALAGAAGNLYAAKMTV 243 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I+P+ F F E++++ +IVILGG S+ + T ++ + +L G++ Y Sbjct: 244 IAPESFSFWESVVMFAIVILGGTGSIPGVFLGTFGMVVLPQLFRGLSDY----------- 292 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + A+ ++++ R L R Sbjct: 293 ----RMLVFGAAMVVLMIFRPEGLWPSRR 317 >gi|296447075|ref|ZP_06889008.1| urea ABC transporter, permease protein UrtB [Methylosinus trichosporium OB3b] gi|296255420|gb|EFH02514.1| urea ABC transporter, permease protein UrtB [Methylosinus trichosporium OB3b] Length = 526 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 89/285 (31%), Gaps = 17/285 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + G +G++++ IGAY+ ++ + + + ++ A + + +L Sbjct: 253 VTYGLMGVINMAHGEMMMIGAYATYVVQNLFRAHLPDHFQYY--LAAAAPVAFVVAALVG 310 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + + + F + + Sbjct: 311 VVIERLVIRFLYGRALETLLATWGVSLILMQTVRTIFGAQNVQVENPAWMSGRLFVTDNL 370 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 ++L + + L RT + R + N+ + AFA+ Sbjct: 371 ELPYNRVVIILFSLAVLLLVSFLLARTRLGLFVRAVTQNRTMAKCVGVDSSRIDTIAFAL 430 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A S+ + +V+LGG+ L+ A L ++ Sbjct: 431 GSGIAGLAGV--ALSQVGNVGPDLGQHYIVDSFMVVVLGGVGQLAGAVYAALGLGVAGKI 488 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + +++ L + I R L L Sbjct: 489 FENLVGAVLAEIG-------------LLVFLIVFIQKRPQGLFAL 520 >gi|113474035|ref|YP_720096.1| inner-membrane translocator [Trichodesmium erythraeum IMS101] gi|110165083|gb|ABG49623.1| inner-membrane translocator [Trichodesmium erythraeum IMS101] Length = 393 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 104/353 (29%), Gaps = 28/353 (7%) Query: 3 IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62 I L+ + +V ++F + + + + L + A G+ ++ G Sbjct: 2 ILKLKSQHRKLLTQTGIIVVIAVIFAIIMPLALSGFRLKLLGRFLSLTIVALGIDLIWGY 61 Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 GLLSL I +A+G Y+ + L + + Sbjct: 62 TGLLSLGHGIFFALGGYALAMHLKLQLPEGELPEFFTLYGVEKLPIFWQPFHSFPLTILA 121 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR-------------- 168 I ++ L+ I I L + Sbjct: 122 IIIIPAVTAAILGYLVFKNRIKGVYFSIITQAALLVFFNFFNGQQKLINGTNGLKTDIEK 181 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 FF + ++ Y V + + I WL IRD++ Sbjct: 182 FFGILAGSEQAQLIFYEVTIISVIIIYLICRWLTSGRFGRLLIAIRDDETRVRFSGYNPT 241 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 K+ FA+S A G++GA + ++P + + +I ++ V +GG +L AT Sbjct: 242 QFKVLVFAISGAIAGISGALYTVQSGIVTPSYMEVAFSIEMVIWVAVGGRGTLVGAIIAT 301 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ F + LV+ + + ++ Sbjct: 302 LLVNFGRTFLSE--------------KFPEIWLFFQGVLFLLVVTILPNGIVG 340 >gi|319795284|ref|YP_004156924.1| urea ABC transporter permease urtb [Variovorax paradoxus EPS] gi|315597747|gb|ADU38813.1| urea ABC transporter, permease protein UrtB [Variovorax paradoxus EPS] Length = 515 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 90/291 (30%), Gaps = 16/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + +++ + + Sbjct: 240 ITYGLMGVINMAHGELMMIGAYATYVMQGIFQKYFPESMFGWYLVAAIPVSFLASALVGA 299 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + I L + +L W + + +G + S V Sbjct: 300 VLERGVIRFL-YGRPLETLLATWGISLMLQQLVRTLFGAQNVGVENPGWMSGGFTMLSNV 358 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +++ + ++ + +T + R + N+ + AFA+ Sbjct: 359 TLPWNRICIIVFAVLVLLAMGWLIGKTRLGLFVRGVTQNRPIASCMGVNTARIDTYAFAL 418 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A S+ S + +V++GG+ L+ A L + + Sbjct: 419 GSGIAGLAGC--ALSQIGNVGPDLGQSYIVDSFMVVVMGGVGQLAGTVYAALGLGILNKF 476 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 G +++ + + I R + ++ S Sbjct: 477 IEGWAGAVLAK-------------IAVLVFIIIFIQKRPQGIFAMKGRSAE 514 >gi|297190788|ref|ZP_06908186.1| D-ribose ABC transporter permease [Streptomyces pristinaespiralis ATCC 25486] gi|197722570|gb|EDY66478.1| D-ribose ABC transporter permease [Streptomyces pristinaespiralis ATCC 25486] Length = 655 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 104/313 (33%), Gaps = 27/313 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 VV + + L G + + + ++G+Q + + A+G++ V+ S G + L+ Sbjct: 31 ALTALVVLLVAMSLLSGDFLTTQNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 89 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ A + G+ +WL + ++ ACG++ G + ++ Sbjct: 90 ALSATVLAWTATSEGVPVWLAVILAVATGAACGLVNGALVSYGKLPPFIATLAML----- 144 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + L + + + ++ +L M + Sbjct: 145 ----------------SIGRGLSLVISQGSPIAFPESVSGLGDTLGGWLPVPVLVMIAMG 188 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L L RT I + I N++A + KL +A+S F +AG A+ Sbjct: 189 LLTALILGRTYIGRSMYAIGGNEEAARLSGLRVKRQKLVIYALSGLFAAVAGVVLASRLA 248 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 P + E + ++VI GG+ S IL + ++ F Sbjct: 249 SAQPQAAQGYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQ 308 Query: 310 LKFDCSFNMRHTT 322 + + Sbjct: 309 VVIGVVIALAVLL 321 >gi|89068973|ref|ZP_01156355.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] gi|89045554|gb|EAR51618.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] Length = 417 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 64/381 (16%), Positives = 134/381 (35%), Gaps = 54/381 (14%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 I+ ++ + P++L F + ++ + + +I+ +FA G +I+ G G LS Sbjct: 5 IVAVMTLFAPIILNPFPANSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGH 64 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G+YS V + G +I I +S +++G +++G SL+ G Y +I TL + Sbjct: 65 AAFLGVGSYSAVWMFKLLGFNIIPAILLSVVVAGLFSVVIGYISLRRSGIYFSILTLAFA 124 Query: 131 EIFQNILIK------WKPITNGKAGIYVADRLYF-------------------------- 158 ++ + +TNG+ G+ V Sbjct: 125 QMSFALAYSVLGNPALINLTNGETGLQVYPSDPQVLHGASAPNVTNLFGLEMRQTCEVKL 184 Query: 159 ------LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 L ++ + + YYV + + + + + R+ R Sbjct: 185 GGTASGLSGCDTHMLPGAFGETFWAFDFNAGYYVCAVLMLIVFYLSIRIFRSPFGMMLRA 244 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 ++ NQ+ L+AF +S + G+AG A+ + +++ + V+ + Sbjct: 245 VKSNQQRLNYTGLNPRPYTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLM 304 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMR 319 ILGG +L + + +N +S F Sbjct: 305 TILGGAGTLIGPVLGAGFIKYFENIFSKINDGVLHSWFAFMPEGLENLFVTLLHPFVGKG 364 Query: 320 HTTLMVIALFLVILMRSHSLL 340 + I LV++ L+ Sbjct: 365 WHLTLGILFMLVVIFLPGGLV 385 >gi|304405845|ref|ZP_07387503.1| urea ABC transporter, permease protein UrtC [Paenibacillus curdlanolyticus YK9] gi|304345088|gb|EFM10924.1| urea ABC transporter, permease protein UrtC [Paenibacillus curdlanolyticus YK9] Length = 363 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 27/333 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------- 84 + ++ + L + + A GL ++ G G+LSL + + +G Y+ + Sbjct: 30 PLYLSDFRLNLLAKFLAFAIVALGLDLLWGYTGVLSLGHGVFFGLGGYAMAMYLKLEASG 89 Query: 85 ------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 GL+ G L + ++ Sbjct: 90 GRMPDFMEWSGLTALPWFWKPFESFGFAFAAGILLPGLLALFLGYVTFRNRIRGVYFTIL 149 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + V R + + + +Y+ + + Sbjct: 150 TQALVIITTTLLIGQQAYTGGTNGVTGYSRIMGYSIANPDTKQMLYWATAAFLVAAFVLC 209 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 +L ++ R IRD + + F +++AFA+S A G+AG F ISP Sbjct: 210 RFLVKSRFGKVLRAIRDGENRVRFIGYNPAFYQMTAFAISGALAGLAGMLFVLHVGIISP 269 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 M +I ++ V +GG ++ A ++ + + Sbjct: 270 SMMGIVPSIEMVLWVAIGGRGTMIGAAIGAVLMNW--------------GKSEISAQYPD 315 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 M +V++ + + L +R Sbjct: 316 AWLFFMGALFVIVVVFLPNGVAGLLGRIQIRKR 348 >gi|170736317|ref|YP_001777577.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|169818505|gb|ACA93087.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 603 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 125/312 (40%), Gaps = 33/312 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + Y+ +Y + A L++V G++G +SL IGAY+ +L S G Sbjct: 324 PWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSDLGW 383 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + IP + +I+ G ++ P+ + RG Y++IATL + E+ +++ W +T G GI Sbjct: 384 SPAVTIPCAGVITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGI 443 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L + Y+ + + A + + L R+ + Sbjct: 444 TGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQVRLLRSHLGRTL 485 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +R++ A + K AFAV G++G A I+ F +I+ + Sbjct: 486 RAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILAL 545 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++VILGG+ ++ LIG+ EL Y + + L L Sbjct: 546 TMVILGGLGNVLGGIVGAIALIGLPELFRWAADY---------------RMLIYGLVLLL 590 Query: 331 VILMRSHSLLRL 342 ++ R LL Sbjct: 591 LVRFRPQGLLGT 602 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R+GL + + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVVVGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +A + +LR T + A R + Sbjct: 126 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280 Query: 337 HSLLR 341 + L Sbjct: 281 NGLFS 285 >gi|328542660|ref|YP_004302769.1| amino acid ABC transporter permease [polymorphum gilvum SL003B-26A1] gi|326412406|gb|ADZ69469.1| Amino acid ABC transporter permease protein [Polymorphum gilvum SL003B-26A1] Length = 344 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 131/341 (38%), Gaps = 31/341 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + +A++ L L Y+ + + ++Y A +I+ G G +SL Sbjct: 29 RVVAFPIALLVILAALPALQFFGGYNYLLHLVLYAMMYAAMASSWNILGGYTGYISLGHN 88 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + IG Y ++ + G++ + PV+ +++ A G ++GL +L+ RG I+++ + Sbjct: 89 VFFCIGGYFSGMVLAYSGVTSLITAPVAGLVAAAVGFLVGLITLRMRGPTFIISSIALLM 148 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + + + W + + + + ++ YY +L + Sbjct: 149 VVRILFDNWHFVGGA------------------NGVTLPQLAIDVQWTKLPYYYAMLVVV 190 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ ++ + R I ++ S K+SAFA+S+ F+GMAGA + Sbjct: 191 SLTVYASYRIKHSKFGLGLRAISQDEVKAESAGINTRLYKVSAFALSAFFVGMAGAIWGE 250 Query: 252 SRDRISPDMFKFSENII-VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + P++F ++ + ILGG +++ +LI E ++L Sbjct: 251 YITYLRPNIFLIVLIAANMVLMCILGGKGTVAGPVVGAVLLIAFNEFFVTYFGASELNIL 310 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + ++ ++ + L R Sbjct: 311 GT------------GVIMVIALMFFPAGIVGTLAKAGKLPR 339 >gi|254440692|ref|ZP_05054185.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] gi|198250770|gb|EDY75085.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] Length = 398 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 126/359 (35%), Gaps = 30/359 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 I+ L + P +L F + ++ + + +I+ +FA G +++ G G LS Sbjct: 12 MLIVFGLVIFAPFILNPFPEGSAMAQFNAGYPDLMQRFVIFGIFAVGFNLLFGLTGYLSF 71 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 IG+Y+ + L++ I ++ M++G +++G SL+ G Y +I TL Sbjct: 72 GHAAFLGIGSYAAIWSMKLVTLNVIPGILLAIMVAGVFALVVGYVSLRRSGIYFSILTLA 131 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS-------------- 174 +++ + G + R Sbjct: 132 FAQMMFAMAYSVLTPITGGETGLQIKNTDTPLFGGPADGSIGRANLFGLEMGNSIELAIG 191 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 +V +Y+ ++ + + + R+ R ++ NQ+ T LSA Sbjct: 192 GWVFTFNLGFYIAGFFLLIAFYLSIRIFRSPFGIMLRAVKSNQQRMNYTGLTPKRYTLSA 251 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F +S + G+AG A ++ P+ ++ + V+ + ILGG +L ++ + Sbjct: 252 FVISGMYAGLAGGLMVAMDTQVGPERMFWTASGEVVIMTILGGAGTLLGPVLGAGMIKYM 311 Query: 295 VELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSHSLL 340 + +N + F M I LV++ L+ Sbjct: 312 ENIISKINKDILHEWFAFLPDGLEDVIVSMVYPFIGKGWHLTMGILFMLVVIFLPGGLV 370 >gi|325273634|ref|ZP_08139850.1| urea ABC transporter permease UrtC [Pseudomonas sp. TJI-51] gi|324101238|gb|EGB98868.1| urea ABC transporter permease UrtC [Pseudomonas sp. TJI-51] Length = 359 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 100/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 A + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 ALQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 DGLPGFMAFLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F + ++ + +G+ S + Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRTILGFDITAQGTRAVLFLLTVGLLLASLYLC 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLTRSKFGRLLTAVRDAENRLMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + LV L ++ L Sbjct: 329 FWLFFLGALFILVTLYLPKGVVGL 352 >gi|299066150|emb|CBJ37333.1| putative transmembrane abc transporter protein [Ralstonia solanacearum CMR15] Length = 341 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 59/320 (18%), Positives = 117/320 (36%), Gaps = 27/320 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L Y+ G Q+LI +FA L +V+G G++SL + +GAY+ Sbjct: 32 IAFWCAPVLVFFILPDYVV-FGSQVLIAGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L + + +A ++ G + ++ + + TL + + K Sbjct: 91 GLLAAHGWGEPLSGLVAAAAVAALAGFCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ LG F + Y L + F ++ L Sbjct: 151 FLTGGVDGLSGVTMDKLLGR------------FEFDLSGRTAYVYSLAVLFGVFVLLRRL 198 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ + R I+ +L + ++AF VS+A G+AG A + + D Sbjct: 199 VRSPFGLSLRGIQQGPGRMPALGANVRMRLVAAFTVSAAVAGVAGGLLAQTTQFVGLDAL 258 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 FS + ++ +++LGG L A+ + ++ G+N + Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALVGAAVFMLAQDVLAGIN--------------PVYWQ 304 Query: 322 TLMVIALFLVILMRSHSLLR 341 + + L +++L +L Sbjct: 305 FWIGLLLMVIVLFARGGILG 324 >gi|299532790|ref|ZP_07046177.1| UrtA [Comamonas testosteroni S44] gi|298719014|gb|EFI59984.1| UrtA [Comamonas testosteroni S44] Length = 537 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 88/291 (30%), Gaps = 16/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + ++ + + Sbjct: 262 ITYGLMGVINMAHGELIMIGAYATYLVQVAFQRWLPEAWFGWYLVVAVPVAFLASALVGA 321 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + I L + +L + + + + + + Sbjct: 322 VLERGVIRFL-YGRPLETLLATFGISLVLQQTVRSLFGAQNVSVENPVWMSGGIALLPNL 380 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +++ + A + + RT + R + N+ + AFA+ Sbjct: 381 TLPYNRIAIIVFAFAVLAGVAFMIARTRLGLFVRGVTQNRAMASCVGVNTARTDTYAFAL 440 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A S+ + + +V+LGG+ L+ A L + +L Sbjct: 441 GSGIAGLAGC--ALSQIGNVGPDLGQNYIVDSFLVVVLGGVGQLAGTVYAALGLGVLSKL 498 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 G +++ + + I R + L+ S Sbjct: 499 LEGWTGAVLAK-------------IAVLLFIVVFIQKRPQGIFALKGRSAE 536 >gi|167837574|ref|ZP_02464457.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 472 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + + Sbjct: 198 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFVAAAALGVV 257 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 258 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVAVMQNL 315 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 316 ILPYNRLAILAFALAVVGIAWAALTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 375 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ ++ L V + Sbjct: 376 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 433 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 434 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 471 >gi|167585723|ref|ZP_02378111.1| inner-membrane translocator [Burkholderia ubonensis Bu] Length = 316 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 99/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPQLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ ++G + L A + I + Sbjct: 68 ATLTIGLGIAAIVCAVVGYTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISMTEIVIIAVAFLVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L+ +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLAGAMVGGVVLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|167561873|ref|ZP_02354789.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia oklahomensis EO147] gi|167569094|ref|ZP_02361968.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia oklahomensis C6786] Length = 316 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 99/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ +GA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPGLGHV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLAIGLGIAAIVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKAGENNPGAVISMTEIAIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ + M F + + Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|284991626|ref|YP_003410180.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160] gi|284064871|gb|ADB75809.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160] Length = 332 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 64/318 (20%), Positives = 134/318 (42%), Gaps = 7/318 (2%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 +G Q + + A G+++ G GLL+ + +G Y I S++GL W+ + V Sbjct: 15 GLGFQAVFLALLAIGINVQFGYAGLLNFGQIAFAMLGGYGIAISVSQWGLDFWVGVAVGI 74 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IKWKPITNGKAGIYVADRLYF 158 + + +++GLP+L+ R DYLAIAT+ +E + + + P+TNG G+ + + Sbjct: 75 LAAVVLALLLGLPTLRLRADYLAIATIAAAEGLRLLFRSVSATPVTNGTRGLSGFNADFV 134 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + R+ + + E+++ V + LS +I L R+ ++IR+++ Sbjct: 135 ALAPWDTARRYGILGTQWSGAELWVTVVGWVLVALSCLLIWLLMRSPWGRVVKSIREDED 194 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A SL + K+ A + + G +A +PD ++ + + + +ILGG Sbjct: 195 AVRSLGKNVYVYKMQALVLGGVLGALGGMVYALGTASANPDQYQNANTFLAYAALILGGA 254 Query: 279 TSLSKIAKATAILIGVVELC-----CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 + + ++ +++ + L L+ + L L+++ Sbjct: 255 ARVLGPVVGSMLMFFIIQFADTGLRTLIGNGVIPEDLLSATDVAQLRFVLIGLGLMLLLV 314 Query: 334 MRSHSLLRLRTPSNFLER 351 R + R R Sbjct: 315 FRPQGIFGDRREVMLDAR 332 >gi|222475839|ref|YP_002564360.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] gi|222454210|gb|ACM58474.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] Length = 332 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 66/323 (20%), Positives = 120/323 (37%), Gaps = 34/323 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + L Y + +Q++I ++ + G G+ S Y IGA Sbjct: 28 AAFVIAGVLGLLAPVLVGGYTLDLVMQLIILILVVTSWIFIAGYFGMFSFAHAALYGIGA 87 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ V+L G+ + + + +++G + + LP L+ G Y+ + TL +EI ++I Sbjct: 88 YAAVLLAGEMGIHPIIAVLLGGVVAGILSIPIALPVLRLSGAYVGMVTLAFAEIVYRLVI 147 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 ++ +T G G FPS F I +YY + + + Sbjct: 148 VFREVTGGPTGYT-------------------GFPSLFGGNRIALYYFVFALVAALLVVQ 188 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R IR+ A L + KL+ F + SA G+AG A + ISP Sbjct: 189 YGLLVNRFGLVARAIREAPDAARMLGNNVPRYKLTGFIIGSAIAGVAGGLQAHTVLIISP 248 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 M + + I +++ I+GG+ ++ I+ G+ E + Sbjct: 249 PMIEVNRMIEFMAMGIIGGLRTIGGGIFGAVIVFGLSEGLRDLGE--------------- 293 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + L +V + L Sbjct: 294 VRLVIWGALLVVVTIYFPDGLAG 316 >gi|332528480|ref|ZP_08404468.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332041991|gb|EGI78329.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 328 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 77/324 (23%), Positives = 131/324 (40%), Gaps = 30/324 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +AV L L + + Y + LI+++ GL++ VG G SL + IG Sbjct: 6 IAVALIAALGLLIAPQFLKSYGVYLLTYWLIFIIAIMGLNLTVGYAGQKSLGHAAFFGIG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL W +P +A+I G+I+G P+L+ + YLA ATL + ++ Sbjct: 66 AYASAILMKAGVS-FWFSLPAAALICFGVGLILGFPALRVQTIYLAFATLGFNTAVWLVM 124 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + +T G GI R L ++ + + +Y L + L A + Sbjct: 125 RNEEWLTGGTFGINNIPRPELLVWSLENNR--------------YYFYFTLAVTLLLAWL 170 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R+ A+ +RDN SL I L +FA+ +AF G+AG FA+ I Sbjct: 171 QWRLLRSPWGKAFMALRDNPIRAESLGVHIRNYTLLSFAIGAAFAGVAGVLFASLVQFIE 230 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F +I++ +V++GG A+ + + E Sbjct: 231 PAPFTVGASIMMYLMVVVGGPGYFLGPVVGAAVGVLLPEWLRF---------------AQ 275 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + + A+ L+++ LL Sbjct: 276 AWYLFIFGAAVVLMMIWLPDGLLS 299 >gi|326319514|ref|YP_004237186.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376350|gb|ADX48619.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 331 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 117/278 (42%), Gaps = 9/278 (3%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 S+ ++LIY + A G ++++G GLLS I + +G+Y+ + +R+ L + L + ++ Sbjct: 28 SLASEVLIYGLAAMGCNLLLGHTGLLSFGQGIFFGLGSYTIALTLTRWPLPMPLALALAV 87 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + ++G +++ RG Y + TL +++F + +T G G+ R Sbjct: 88 VAGAVGAALVGWVAIRQRGTYFVMLTLAFAQMFYFLAYSMPGLTGGDNGLMDIPRPS--- 144 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + F + Y + + ++ ++ + + +RDN++ Sbjct: 145 ------LAVGGFTLWPLASPWQYYGFVAVVFLVAFWLLQKVSASVFGRTLLAVRDNEERA 198 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + KL AF +S A G+AGA A ++ + +++ + ++GG + Sbjct: 199 GAIGYDLKLLKLQAFVISGAVTGLAGALHAMMTGIAPLANAEYHTSEMILVMTVIGGTGN 258 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 L +A + V + + + L ++ Sbjct: 259 LLASLLGSAFYLIVGDWLSTLWPRWLLLLGVVLMVISL 296 >gi|83746540|ref|ZP_00943591.1| LivM [Ralstonia solanacearum UW551] gi|207743852|ref|YP_002260244.1| transmembrane protein [Ralstonia solanacearum IPO1609] gi|83726871|gb|EAP73998.1| LivM [Ralstonia solanacearum UW551] gi|206595252|emb|CAQ62179.1| transmembrane protein [Ralstonia solanacearum IPO1609] Length = 341 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 116/320 (36%), Gaps = 27/320 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L Y+ G Q+LI +FA L +V+G G++SL + +GAY+ Sbjct: 32 IAFWCVPVLVFFVLPDYLV-FGSQVLIAGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L + + +A ++ G + ++ + + TL + + K Sbjct: 91 GLLAAHGWGEPLSGLAAAAAVAALAGCCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ LG F + Y L + F ++ L Sbjct: 151 FLTGGIDGLSGVTMETLLGR------------FEFDLSGRTAYVYSLAVLFCLFVLLRRL 198 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ + R I+ +L + + AF VS+A G+AG A + + D Sbjct: 199 VRSPFGLSLRGIQQGPARMPALGADVRMRLVVAFTVSAAVAGVAGGLLAQTTQFVGLDAL 258 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 FS + ++ +++LGG L A+ + ++ G+N + Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALVGAAVFMLAQDVLAGIN--------------PVYWQ 304 Query: 322 TLMVIALFLVILMRSHSLLR 341 + + L +V+L +L Sbjct: 305 FWIGLLLMVVVLFARGGILG 324 >gi|11498430|ref|NP_069658.1| branched-chain amino acid ABC transporter, permease protein (braE-2) [Archaeoglobus fulgidus DSM 4304] gi|2649777|gb|AAB90411.1| branched-chain amino acid ABC transporter, permease protein (braE-2) [Archaeoglobus fulgidus DSM 4304] Length = 323 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 67/319 (21%), Positives = 128/319 (40%), Gaps = 26/319 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 +L+ L Y + +IY + A GL+I++G G SL Y +GAY Sbjct: 9 VILILAVLLPLTGSSYALRISTLFIIYTIAAMGLNIIIGYTGQASLAQGAFYGLGAYVSA 68 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L W + V+ ++GL +L+ +G Y AIATL+ + I ++ KW Sbjct: 69 LLVLNGWS-FWASVIVAIAFVAFVAFLIGLMTLRLKGAYFAIATLLFNVIIYEVVDKWDE 127 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G++ + + YY++L + + + + Sbjct: 128 VTRGPRGLFGIPSPSIELSGIS----------ISFSGTYNFYYLMLAVLIVMTLLYWLII 177 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R++ + IR+N+ + K+++F +S+ F +AGAF++A I PD+ Sbjct: 178 RSSFGSIIVAIRENELLAEYAGVNLTKFKVASFVLSAIFAAVAGAFYSAYIGSIFPDITS 237 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F + ++ +I GG ++ TA++ + E+ + Y Sbjct: 238 FVNSFAFLTAIIFGGAGTMLGPFIGTAVVTLINEVFFTLAQYTV---------------L 282 Query: 323 LMVIALFLVILMRSHSLLR 341 + I L IL ++ Sbjct: 283 VQGIVFLLAILFMPKGVMG 301 >gi|163739271|ref|ZP_02146682.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] gi|161387341|gb|EDQ11699.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] Length = 356 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 122/324 (37%), Gaps = 9/324 (2%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 F +I I+++ +++G G++S + + +GAY + + Sbjct: 28 AFAPFLFPGVRTVDTAARICIFIVLVASYDLLLGYGGIVSFAHTMFFGMGAYGVALTSTH 87 Query: 88 YGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 G + A ++ +++GL SL+ R + A+ TL ++ ++ + +T Sbjct: 88 MGRGFDALAIGAISGAALAAVLALLIGLFSLRVRAIFFAMITLAVASAVAVLVSQLSGLT 147 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF-VIYEIFMYYVLLGMCFLSASIILWLRR 203 G+ G+ F + ++ YY++ G L +L + Sbjct: 148 GGEDGLTFKTPRELGPAFKFGKETFDGTLFGVKLNGKLLTYYLIFGGSALLFLALLRVVN 207 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-K 262 + + IR+N ++ +++ +++A +S+A ++G+ +A + PD Sbjct: 208 SPFGRVLQAIRENDFRAEAIGYRVVYYRVTATCLSAAIAALSGSLYAIWLRYVGPDTTLS 267 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLLKFDCSFNM 318 + I ++ +V++GGM ++ + + + L ++ L + Sbjct: 268 MTIMIDILLMVVIGGMGTIYGAVIGATLFVLAQNYLQNLMGVLSSMTEGLPLLPELLSPD 327 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 R + + L + ++ Sbjct: 328 RWLLWLGVLFILSVYFFPSGVVGR 351 >gi|297562097|ref|YP_003681071.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846545|gb|ADH68565.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 329 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 117/299 (39%), Gaps = 5/299 (1%) Query: 55 GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 GL++ G GLL+ V +GAY I + + L + + V + + +++G+P+ Sbjct: 28 GLNLHFGYTGLLNFGQVGFMLVGAYGVGISVAVFDLPLVVGFGVGLLCAFVMALLLGIPT 87 Query: 115 LKFRGDYLAIATLIMSEIFQNILI--KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 L+ R DYL+I T+ +E+ + + +P+T G G+ + R+ Sbjct: 88 LRLRADYLSITTIAAAEVIRLVYRAGFAEPLTGGVYGLQNLASDFRAINPFDGGERYGFG 147 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 S+ +++ V G+ L A + L + + IR+++ A SL + K+ Sbjct: 148 ALSYNGNHLWVLVVTWGLVLLMAGLTWVLMHSPWGRVIKGIREDEDAVRSLGKNVFAYKM 207 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 A + +AG A + I PD FK + I++LGG + + Sbjct: 208 QALVLGGLVGALAGCMLAVYQASIQPDQFKPQVTFFLWVILLLGGAGRVFGPVLGAMVFW 267 Query: 293 GVVELCCGM---NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++ G+ + + + L L+I+ R L+ R Sbjct: 268 FLMNFTDGVLQGFGSMGWLPFLDGPDYGAIQLAFVGLLLVLLIVFRPQGLIGDRKEMLI 326 >gi|320335596|ref|YP_004172307.1| ABC transporter integral membrane subunit [Deinococcus maricopensis DSM 21211] gi|319756885|gb|ADV68642.1| ABC-type transporter, integral membrane subunit [Deinococcus maricopensis DSM 21211] Length = 319 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 104/265 (39%), Gaps = 15/265 (5%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + I IL + +FA ++ G GLLS + + AY+ L + + Sbjct: 41 LAIDILAWGLFAVAFDLLFGFSGLLSFGHAAFWGVSAYASAYLLGHGQGVP-VALLGGTA 99 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + + +G S++ G Y ++ TL +++ + ++W +T G+ G+ R LG Sbjct: 100 AALLLAVPVGFLSVRSLGIYFSMITLAFAQMLSFLALQWTDVTGGENGLQGLTRPNLLGL 159 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + + YY L + + R+ + +RDN Sbjct: 160 DFTN--------------GVTRYYFALAVFAAGFYVAYRTVRSPFGKTLQAVRDNATRAQ 205 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 S+ KL AF +S+A G+AG + +S D+ + + V+ + +LGG +L Sbjct: 206 SIGYNPTRFKLMAFLISAALSGLAGTLYTFGHGVVSLDVVSWRTSGEVVMMTLLGGTGTL 265 Query: 282 SKIAKATAILIGVVELCCGMNFYYF 306 A+++ + ++ N Sbjct: 266 FGPVVGAALVLLLRDVLTEANIPVG 290 >gi|161525652|ref|YP_001580664.1| urea ABC transporter permease UrtB [Burkholderia multivorans ATCC 17616] gi|189349622|ref|YP_001945250.1| branched-chain amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|160343081|gb|ABX16167.1| urea ABC transporter, permease protein UrtB [Burkholderia multivorans ATCC 17616] gi|189333644|dbj|BAG42714.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 540 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + +++ Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHVPAAFDWYPLVAVPASFATAALVGIV 325 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 326 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 383 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 384 ILPYNRLAILAFALAVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 443 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ + L V + Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGSFGLGLVGKA 501 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAAKGRSAE 539 >gi|119385780|ref|YP_916835.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119376375|gb|ABL71139.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Paracoccus denitrificans PD1222] Length = 338 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 129/326 (39%), Gaps = 17/326 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL + LF +Y + I+ ++V G G+ SL V +AI Sbjct: 8 LLLCGLFACVALFWPMISGMRYSITQTTFFFIWATVVVQWNLVFGIGGIFSLAQVAIFAI 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY +LG G S+ L +P A+++ +I+G+ L+ G Y+A+ T+ +S++ + Sbjct: 68 GAYVTAMLGYYLGTSMLLAMPAGAVVAVVASIILGIACLRLYGPYVALLTICVSQVLYVL 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ L + + YYV L + + Sbjct: 128 IVNDTDCF--TNPPAGCMPLMGGVRGFSRFGDLGFRDWLGAGFYVGNYYVGLLLLSAAIL 185 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + + + A+R +RDN + +L F +S+ F G+AGAF+A + + Sbjct: 186 FSIMIIHSPMGLAFRALRDNPVYAAARGVDRFRYQLWIFGLSAFFTGLAGAFYAVNTGVV 245 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P +F F + ++S++I+GG+ ++ A+L+ E + + Sbjct: 246 GPVVFSFQHLLFLLSMIIVGGIGTVWGPVIGAAVLMLADEAMRELGDF------------ 293 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 M + L +++ L L Sbjct: 294 ---RDIGMGLILVACVVLMPRGLTGL 316 >gi|55820454|ref|YP_138896.1| branched-chain amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55822338|ref|YP_140779.1| branched-chain amino acid ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|116627276|ref|YP_819895.1| ABC transporter permease [Streptococcus thermophilus LMD-9] gi|55736439|gb|AAV60081.1| branched-chain amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55738323|gb|AAV61964.1| branched-chain amino acid ABC transporter permease protein [Streptococcus thermophilus CNRZ1066] gi|116100553|gb|ABJ65699.1| Uncharacterized ABC-type transport system, permease component [Streptococcus thermophilus LMD-9] gi|312277764|gb|ADQ62421.1| Uncharacterized ABC-type transport system, permease component [Streptococcus thermophilus ND03] Length = 316 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 76/337 (22%), Positives = 137/337 (40%), Gaps = 42/337 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + I L + L+L + Y + + I I ++ G ++V+G G +L Sbjct: 6 KVNLIWFGLIIGLFLILKGLELSGIMNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAYS I+ +L + V +I+ +I G+P+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYSSAIITGMMPTYDGFYLSMVVGVIIAAVVALIFGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M+EI + I++ +TNG AG+ V+ Sbjct: 126 GMAEIIRIIIVNGGELTNGAAGLTGILPYTSWP-------------------------VI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++L R+A TIR+++ A S+ + K+ F + + +AG+ Sbjct: 161 YFFVVIITILVLNFLRSATGRQAITIREDEIAAESMGVNVTKLKVIIFVIGAMISAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + + P F ++I + I +LGG+ S++ A +L + + Sbjct: 221 LYVSYIGTVVPKDFAIMKSIDYLIIAVLGGLGSITGTIIAAVVLGIINMFLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + +AL LV+L R LL + Sbjct: 275 ---------SNLRMIIYALALILVMLFRPGGLLGTKE 302 >gi|322368700|ref|ZP_08043267.1| ABC-type branched-chain amino acid transport system, permease protein II [Haladaptatus paucihalophilus DX253] gi|320551431|gb|EFW93078.1| ABC-type branched-chain amino acid transport system, permease protein II [Haladaptatus paucihalophilus DX253] Length = 437 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 71/399 (17%), Positives = 136/399 (34%), Gaps = 61/399 (15%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDS----MGIQILIYVMFAWGLSIVVGSL 63 +N IL +L +Y L L S + + + I +Y M A L++ G Sbjct: 10 INDTMLILGVLLAIYVLYLLAGSALGYSLRGQLNSLARLTFLIGVYGMLALALNLHWGYT 69 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGL-------------SIWLLIPVSAMISGACGMIM 110 GL ++ A+G Y+ I+ +W+ I + + G+++ Sbjct: 70 GLFNIGIAGFMAVGLYTMAIVSKPPASATAGAATVSGLGLPLWVGILAGMLAAAILGLLV 129 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIK------------------WKPITNGKAGIYV 152 LP+L+ R DYLAI T+ SEI + I++ + N + + Sbjct: 130 ALPALRLRADYLAIVTIATSEIIRFIVMSDQFQTFTLFGKTLGTGGGRGLLLNFEDPLQP 189 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 G +L V+ + +L+G ++ + + Sbjct: 190 LFDSAPYGALDDALNPLVGGSIGPVLNSLTYAVILMGFVAAFYWLMKRTGESPFGRVLKA 249 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR++++ SL K+ +F + A +G+AG + + I+P FK V Sbjct: 250 IREDEEVANSLGKNTDVFKIKSFMLGCALMGLAGILWQMRQGAITPTSFKPQVTFFVWLA 309 Query: 273 VILGGMTSLSKIAKATAILIGVV--------------------------ELCCGMNFYYF 306 +I+GG S + A+ G++ + N + Sbjct: 310 LIIGGAGSNTGSVLGAAVFAGLLYQGPLYLKNIIRQVYNVSGAPNTFADAVGPLFNGHIT 369 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + N +M L ++ R +L R Sbjct: 370 PMVAYIINNINALQLVIMGAVLIWIMQHRPEGVLGHRKE 408 >gi|83719214|ref|YP_442049.1| branched-chain amino acid ABC transporter permease [Burkholderia thailandensis E264] gi|83653039|gb|ABC37102.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 542 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + + Sbjct: 268 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPASFLAAAALGVV 327 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + S + + Sbjct: 328 LER--TVLRHLYGRPLETLLATFGVSLILIQATRTIFGAQNVQVVNPSWMSGGVTVMQNL 385 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 386 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 445 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ ++ L V + Sbjct: 446 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 503 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 504 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 541 >gi|291300338|ref|YP_003511616.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728] gi|290569558|gb|ADD42523.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728] Length = 337 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 57/321 (17%), Positives = 114/321 (35%), Gaps = 27/321 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++ L Y G ++L + A ++++ G+ GL SL Y IGAY Sbjct: 26 LAVVAVLACVPFIVDDYTLITGNRVLSLGLLAASVALLTGTAGLPSLGQAAPYGIGAYLA 85 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 L L + +A + G ++ RG + TL + EI KW+ Sbjct: 86 YNLAELDWTFAPLQVVAAAAAGALFNAVTGPVVVRTRGVVFLMVTLAVGEIAVVAAGKWE 145 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +TNG G P ++ + +Y+ LG+ + + ++ + Sbjct: 146 SVTNGTDGTGRIPP-------------GELIPGEPLVDDANLYWYALGVAVVVITAMVLV 192 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 +R+ RDN+ + + L + + A G+ G+ A ++ +SP Sbjct: 193 QRSRGGKLLHGSRDNEMRMRASGHRVSGYLLLTYIAAGAIAGVGGSVLATTQRYVSPSDM 252 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 FS +++ V++GG S++ ++I +L Sbjct: 253 DFSVAALILLAVVIGGAFSITGALAGVLLVIVARDLIGNHLPGQGP-------------- 298 Query: 322 TLMVIALFLVILMRSHSLLRL 342 L+ I + + + + L Sbjct: 299 LLLGILFIVAVYLLPNGLAGR 319 >gi|326790025|ref|YP_004307846.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM 5427] gi|326540789|gb|ADZ82648.1| ABC-type transporter, integral membrane subunit [Clostridium lentocellum DSM 5427] Length = 291 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 99/303 (32%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +L+ +GAY+ ++ + L + + Sbjct: 7 LINGLNLGSIYALIALGYTMVYGIAKMLNFAHGDVIMVGAYTLSLIMTSLNLPPTVAVIA 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G+ + + K + LI + L + G Sbjct: 67 SVVVCSVLGVTIEKIAYKPLRKASPLTVLITAIGVSYFLQSVALLLFGSK---------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V S+I + + L + + L++ +T I A + +++ Sbjct: 117 -QRKVNSVITIQPIQIAGIELTGESIVTLGVTLIIMIGLTLFINKTKIGKAMLAVSEDKG 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA +AG + +S + P I +LGG+ Sbjct: 176 AAQLMGINVNRTISITFAIGSALAAVAGVLYVSSYGFVGPYT-GSLPGIKAFVAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + L + F L +V+L++ Sbjct: 235 GSVPGAMLGGILLGIIESLSKAYISTNLADAIVFS-------------VLIIVLLVKPAG 281 Query: 339 LLR 341 LL Sbjct: 282 LLG 284 >gi|254486933|ref|ZP_05100138.1| inner-membrane translocator [Roseobacter sp. GAI101] gi|214043802|gb|EEB84440.1| inner-membrane translocator [Roseobacter sp. GAI101] Length = 327 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 106/291 (36%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L + + ++ ++ + I + GL+I +G GL+S + Sbjct: 6 LLNIVLFALLPVTALAAFMLDEPFVITLVTKAAILALAGVGLNIALGLGGLVSFGHAAFF 65 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +G Y+ +L S ++ + +++ ++ G + Sbjct: 66 GLGGYAMGVLASHAQSYTPIMESPFLIEGTKSMLVIWGVAIVTGGLAALAIGALSLRTTG 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + G S+ FP + I + + G+ + Sbjct: 126 VYFIMITLAFGQMLYYFAISWPAYGGEDGLSIYIRNEFPGLNTLDPIQFFAIAFGVLAIV 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I L ++ A R N + ++ T +L AF +S A +AGA FA Sbjct: 186 LFIASRLAKSPFGLALSAARQNAERVETVGITPFRLRLVAFVISGAITALAGALFADLNR 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 +SP MF + + ++ VILGG+ L A+ I + + G++ ++ Sbjct: 246 FVSPTMFSWHTSGEIMVFVILGGVGRLFGPVAGAALYILLEHVLGGLSDFW 296 >gi|161525653|ref|YP_001580665.1| urea ABC transporter permease UrtC [Burkholderia multivorans ATCC 17616] gi|160343082|gb|ABX16168.1| urea ABC transporter, permease protein UrtC [Burkholderia multivorans ATCC 17616] Length = 406 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 99/350 (28%), Gaps = 32/350 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 63 LAVGIGVPLAALVAPESSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 122 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + +++ + Sbjct: 123 FALGGYAIGMYLMREIGRDGQYGSDLPDFMVFLDWHQLPWYWAGTQHLAWALLLVVIVPA 182 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + A + +I Y + + R FP + Sbjct: 183 VLAWVFGFFAFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPIT 242 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 243 SPGTRTVLLLLTFATLVLAFVAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 302 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + ++P +I + V +GG +L + G Sbjct: 303 TVSAVLCGIAGALYVPQVGIVNPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 362 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + F + + LV L+ ++ + Sbjct: 363 SVFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGVVER 398 >gi|91978828|ref|YP_571487.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91685284|gb|ABE41586.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 346 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 127/331 (38%), Gaps = 26/331 (7%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 K L + L Y ++LI + A L++VVG GL+SL Sbjct: 6 QKKISRLPAWLLPVLCLAAAIALPFVVPVYYVQFASKVLILGVLAMALNLVVGQGGLVSL 65 Query: 69 NCVIAYAIGAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + + Y ++ +Y S+ L +P + + + +++G +L+ RG Y + TL Sbjct: 66 CHAAFFGLSGYVLALMSPKYDAASLLLTLPAAVLAASFAALVIGALALRTRGVYFIMVTL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 E+ + + + + Y+V+ Sbjct: 126 AFGEMLFYLFHDADFAGGSDGAFINVKP----------ELTIAGVRLLDLDKPLTFYFVV 175 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + + ++++ + R+ +A RDN++ +L I +L AF +S A G+AG Sbjct: 176 LAVTVAAIALLVTVVRSPFGHALAAARDNERRARALGFPIFRIRLIAFVLSGALAGVAGY 235 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A ++P M + ++ V+ +V++GG+++++ L+G+ E+ + Sbjct: 236 LAAVQFGFVAPQMLGWHQSATVLVMVLIGGLSTVTGPLIGALALLGLEEVLKATLEQWKL 295 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + + ++L+ + Sbjct: 296 AE---------------GLIVIAIVLLLPNG 311 >gi|222081820|ref|YP_002541185.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726499|gb|ACM29588.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 637 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 125/324 (38%), Gaps = 33/324 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A L+L L Y + ++LI V+FA L ++ GL S + +GA Sbjct: 317 AAAGVLILGAVLLPLVLGNYGLGVASEVLIAVIFATSLQFMMSVGGLDSFGHAASLGLGA 376 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y + G + + + +++ A ++ G ++ Y A+ TL ++IF +I Sbjct: 377 YGAALSVQWLGAPMEFALVIGPVVAAAISLVSGWFCVRLSNIYFAMLTLAFAQIFWSIAY 436 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W +T G GI +PS + Y++ L LS I Sbjct: 437 QWVDVTGGDNGIVGV------------------WPSDWASGAKAFYWLALAAAMLSVGCI 478 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 +L +A R +RD+ + + + +AF VS+ F G+AG+ A + I P Sbjct: 479 RYLTFAPFGHALRALRDSPQRAAATGIPRRTVQHTAFVVSAFFAGLAGSLLAFQKGSIFP 538 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 ++ +I + +V+LGG ++S + + + + S Sbjct: 539 EVLGIPMSIDGLVMVLLGGFGTVSGGIVGAIV---------------YKTASIWLMSNTD 583 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 ++ + L+++ ++ Sbjct: 584 LSRMILGGLIILLVVAFPEGIVGT 607 Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 89/305 (29%), Gaps = 28/305 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG--LSIWLLI 96 + + A GLS++ G +++ Y +GAY L +R+ W + Sbjct: 14 FLTGLSNAASLFLVASGLSLIFGVTRIVNFAHGAFYMLGAYIAYSLTTRWESVFGFWAAL 73 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 VSA + CG ++ + L+ + L+ + ++ + G + Sbjct: 74 LVSAAVVAVCGGLLEILLLRRIYRAPELLQLLATFGVTLVVEDGVRLIWGPEDLVGPRAP 133 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + + ++ + + L L R+ R + Sbjct: 134 GLSGA----------VEILGRPFPAYDLVLIALGPAVLGMLWLLLHRSRWGILVRAATQD 183 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L + FA+ G + V+ + +G Sbjct: 184 RDMVSALGVNQKWLFTGVFALGVFLAAFGGGLQIPRDAVTHFMDLSVITEVFVVVV--IG 241 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ A ++ + F LM + + +V+++R Sbjct: 242 GLGSIGGAFLAAIVVSELNAFGI--------------LVFPGISLVLMFVVMAVVLVLRP 287 Query: 337 HSLLR 341 Sbjct: 288 WGFFG 292 >gi|86748068|ref|YP_484564.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86571096|gb|ABD05653.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 351 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 120/337 (35%), Gaps = 28/337 (8%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + K+L ++ VV +L L Q Y+ G ++LI +FA +V G G++ Sbjct: 15 RTGRRLKVLPIIEVV--VLAIGLLLPLVLQDYLTVFGTRVLILCLFALSFDLVWGYSGIM 72 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLS-IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 S + + Y +L ++ + L++P +I + +++G L R I Sbjct: 73 SFGQAVFFGSAGYGVALLARDLNVTSMLLVLPAGVLIGFSIALLIGGFLLLGRNPSSVIF 132 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + + G + + + YY Sbjct: 133 VSLGTLTGSYAFDRLARGWYYLGGQNGIPSIPPMQ-----------IGGYDLTEGPVFYY 181 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +L + L +L ++ A +R+N++ + K F+++ A G+A Sbjct: 182 FVLAILLLVYLGCRFLTKSQFGLALAGLRENEQRIAFFGYQVQHIKAIIFSLAGAIAGLA 241 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G+ +A + P+M + V+ V+ GG +L T ++ V Sbjct: 242 GSLYAFHEGFVWPNMLGVVMSTQVVLYVLFGGSGTLIGAVIGTVVIEIVSFWLSN----- 296 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 S+ ++ + LVIL R L+ L Sbjct: 297 ---------SYQDIWPIILGCLMLLVILFRPAGLISL 324 >gi|295700153|ref|YP_003608046.1| inner-membrane translocator [Burkholderia sp. CCGE1002] gi|295439366|gb|ADG18535.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 678 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 126/284 (44%), Gaps = 18/284 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + ++ILI V+FA L ++G GL S + +GAY + L + + Sbjct: 372 PYMPVLLVEILIAVLFATSLHFIMGPGGLHSFGHAAYFGLGAYGAALFLKVLNLPMEAAL 431 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++ ++ G ++ G YLA+ TL ++I +++ +W +T G GI Sbjct: 432 LLGPLLAVVGALVFGWFCVRLSGVYLAMLTLAFAQIVWSVVFQWDDVTGGSNGI------ 485 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +PS+++ + YY+ L L ++ + + + A R RD+ Sbjct: 486 ------------LGLWPSNWLSSPVSFYYLTLACAVLGVGLLRRMLFSPLGYAMRASRDS 533 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + ++F +++ F G+AG+ +A S+ ISP++ S ++ + +V+LG Sbjct: 534 ALRAEAIGIDVKRVQWASFVIAALFCGLAGSLYAFSKGNISPEVISVSRSVDGLVMVLLG 593 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 G+ +LS A+ + + Y+ L + Sbjct: 594 GLQTLSGPIVGAAVFTWLQDTVARQTDYWQALLGLAILLLVIAF 637 Score = 66.0 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 95/312 (30%), Gaps = 18/312 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + + A GLS++ G +++ Y G AYS + WL Sbjct: 37 LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYVAYSIASRFGQTAGGFWLS 96 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +A+ G ++ + L+ + L+ + I G ++ Sbjct: 97 VLAAALAVAVLGALVEMVVLRRIYPAPELFHLLATFALVLIFRDAALWLWGPDDLFGPRA 156 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +++ + + L RT R Sbjct: 157 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 206 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + F V + G+ GA +V++ Sbjct: 207 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 264 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A ++ + LC G+ ++ S + + + +V+++R Sbjct: 265 GGMGSIPGAFIAALLIAEIKALCIGVGH---VTIFGIGLSLSRFTLVAEFVVMAVVLVVR 321 Query: 336 SHSLLRLRTPSN 347 LL + + Sbjct: 322 PWGLLGRASATV 333 >gi|116691683|ref|YP_837216.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|116649683|gb|ABK10323.1| amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia HI2424] Length = 603 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 124/312 (39%), Gaps = 33/312 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + Y+ +Y + A L++V G++G +SL IGAY+ +L S G Sbjct: 324 PWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSDLGW 383 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + IP + I+ G ++ P+ + RG Y++IATL + E+ +++ W +T G GI Sbjct: 384 SPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGI 443 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L + Y+ + + A + + L R+ + Sbjct: 444 TGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQVRLLRSHLGRTL 485 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +R++ A + K AFAV G++G A I+ F +I+ + Sbjct: 486 RAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILAL 545 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++VILGG+ ++ LIG+ EL Y + + L L Sbjct: 546 TMVILGGLGNVLGGIVGAIALIGLPELFRWAADY---------------RMLIYGLVLLL 590 Query: 331 VILMRSHSLLRL 342 ++ R LL Sbjct: 591 LVRFRPQGLLGT 602 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R+GL + + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVVVGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +A + +LR T + A R + Sbjct: 126 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280 Query: 337 HSLLR 341 + L Sbjct: 281 NGLFS 285 >gi|167846941|ref|ZP_02472449.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei B7210] Length = 503 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 229 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 288 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 289 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 346 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 347 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 406 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 407 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 464 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 465 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 502 >gi|186477003|ref|YP_001858473.1| urea ABC transporter permease UrtB [Burkholderia phymatum STM815] gi|184193462|gb|ACC71427.1| urea ABC transporter, permease protein UrtB [Burkholderia phymatum STM815] Length = 543 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 82/291 (28%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + + Sbjct: 269 ITYGLIGVINMAHGEFLMIGAYATYVVQNLVQRYLPGAFDWYPLFAVPAAFAVAALVGIV 328 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 329 LER--LVLKHLYGRPLETLLTTFGISLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 386 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + A+ L +T + R + N++ + + AFA Sbjct: 387 ILPYNRLAILAFSLIVVATAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTAYVDSCAFAF 446 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ L+ L V + Sbjct: 447 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKA 504 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 505 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 542 >gi|167618990|ref|ZP_02387621.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis Bt4] Length = 518 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + + Sbjct: 244 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPASFLAAAALGVV 303 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + S + + Sbjct: 304 LER--TVLRHLYGRPLETLLATFGVSLILIQATRTIFGAQNVQVVNPSWMSGGVTVMQNL 361 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 362 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 421 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ ++ L V + Sbjct: 422 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 479 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 480 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 517 >gi|218510466|ref|ZP_03508344.1| branched-chain amino acid ABC transporter, permease protein, putative [Rhizobium etli Brasil 5] Length = 358 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 109/311 (35%), Gaps = 7/311 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S +++I ++ GL I +G+ G+LS + ++GAY ++ L ++ Sbjct: 48 LTSTVTELMIRIVVVVGLYIFIGNSGVLSFGHISFMSVGAYGFIWLSCCTLPTV------ 101 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ +L + A L + + + A Sbjct: 102 KPLYFPGLSEVLQNVALPVAQGTVGAAALAGFVALVAGAVLMRLSGTAASIATFALLAGQ 161 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S + V + L+ + + + R RD Sbjct: 162 YALYKNWTNVTGGTASIANVPVFVTPLVGTVLAVLAVIVAWAHQVSKYGLMLRAARDEPT 221 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I + AFA+S +G+ GA A ++ D F + ++++I+GG+ Sbjct: 222 AAKASGVNIWRVRTIAFALSGTIVGLGGAMHAGFVGVVTADAFYLGMTFMTLAMLIVGGI 281 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SLS L V EL + + F+ ++ L +A+ LV+L R Sbjct: 282 GSLSGAVVGVVTLTAVTELLRRLEVGVPVGDMLFEMPRGLQEVGL-GVAMILVLLFRPAG 340 Query: 339 LLRLRTPSNFL 349 ++ + S L Sbjct: 341 IMAGKELSLNL 351 >gi|89068379|ref|ZP_01155782.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516] gi|89046033|gb|EAR52092.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516] Length = 327 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 113/328 (34%), Gaps = 15/328 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L ++ LL + + ++ +++I + A GL+I +G GL+SL + Sbjct: 6 LLNALILAGLLAVPLWALAADEPFTITLATRVVILALAAVGLNIALGIGGLVSLGHAAFF 65 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y+ IL L + + + ++ L + + L+ Sbjct: 66 GIGGYAMGILAHHAQTYTALDLGLFTVSGTKSMPVIWLVATLASMLAALLIGLLSLRTSG 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + G S+ FP + I + + + L+ Sbjct: 126 VYFIMITLAFGQMFYYFAIGWAEYGGEDGLSIYLRNSFPGLNTLVPIHFFGLCFAVLCLA 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R ++ KL AF VS A G+AGA FA Sbjct: 186 LFLHARLAASPFGLALNAARQVPGRAEAVGLDPKRLKLLAFVVSGAITGLAGALFADLNR 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP MF + + ++ +VILGG + A+ + + G+ Y+ Sbjct: 246 FVSPTMFSWHFSGEIMVLVILGGTARVMGPVAGAALYVALEHWLGGLTDYW--------- 296 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L L++L ++ + Sbjct: 297 ------IIFLGAILLLIVLFARGGIVGM 318 >gi|330939916|gb|EGH43126.1| inner-membrane translocator [Pseudomonas syringae pv. pisi str. 1704B] Length = 239 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 22/234 (9%) Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR-------SLI 167 ++ GDYLAI TL EI + +L W T G G+ V + R + Sbjct: 1 MRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGVPVPAPTFLGLEFGRRAKDGGVPIH 60 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 +F F + + IF+Y VL + I L R I AW +R+++ A S+ Sbjct: 61 EYFGFDYNPDLKFIFIYTVLFLVVLAVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNH 120 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + KLSAF + ++ G+AG FFA+ + ++P F F E+ ++++IV+LGGM S + A Sbjct: 121 VLVKLSAFTIGASTAGLAGVFFASYQGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIA 180 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +L EL + Y L I + L+++ R L+R Sbjct: 181 AFVLTVAPELLRSFSEY---------------RVLLFGILMVLMMIWRPRGLIR 219 >gi|194335627|ref|YP_002017421.1| ABC transporter related [Pelodictyon phaeoclathratiforme BU-1] gi|194308104|gb|ACF42804.1| ABC transporter related [Pelodictyon phaeoclathratiforme BU-1] Length = 634 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 111/304 (36%), Gaps = 17/304 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L +Y + + +Y + GL VG LG ++L +A+GAY Sbjct: 20 AAMFIALAALPTFWHGQYALGLLTLMAVYGVLLIGLDATVGYLGQVNLAQAALFALGAYG 79 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 + + L + + G + LP+L+ G A++TL + + +L ++ Sbjct: 80 AALAVQAGAP-LPLALVAGIAAALIPGAALALPALRLEGPQFALSTLSFATLSVIVLNEF 138 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +TNG G+ V ++ Y++ L F++ Sbjct: 139 ESVTNGALGLSVTRP----------------RLFGLILDSTGFYWLCLATLFVAWEASQS 182 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L ++ A +RD+ A +L + K+ AFA S G+AG + + P Sbjct: 183 LLKSRFGLAIEALRDSPTATDALGIGALRHKVLAFAWGSTLAGLAGGLHTMNFGYLQPGA 242 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + +I++ V+ GG S A++ + L + +F Sbjct: 243 FGYELMVILLLGVVFGGRRSQWGAFLGAAVVAMLPNLLSNRTLFSVLVSAGCILTFVPTF 302 Query: 321 TTLM 324 L+ Sbjct: 303 RALL 306 >gi|239816981|ref|YP_002945891.1| urea ABC transporter permease [Variovorax paradoxus S110] gi|239803558|gb|ACS20625.1| urea ABC transporter, permease protein UrtB [Variovorax paradoxus S110] Length = 515 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 90/291 (30%), Gaps = 16/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + +++ + + Sbjct: 240 ITYGLMGVINMAHGELMMIGAYATYVMQGIFQRYMPEAAFGWYLVAAIPVAFLSSALVGA 299 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + I L + +L W + + +G + S V Sbjct: 300 VLERGVIRFL-YGRPLETLLATWGISLMLQQLVRSLFGAQNVGVENPGWMSGGFTMLSNV 358 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +++ + ++ + RT + R + N+ + AFA+ Sbjct: 359 TLPWNRICIIVFAVLVLLAMGWLIGRTRLGLFVRGVTQNRPIASCMGVNTARIDTYAFAL 418 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A S+ S + +V++GG+ L+ A L + + Sbjct: 419 GSGIAGLAGC--ALSQIGNVGPDLGQSYIVDSFMVVVMGGVGQLAGTVYAAMGLGILNKF 476 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 G +++ + + I R + ++ S Sbjct: 477 IEGWAGAVLAK-------------IAVLVFIIIFIQKRPQGIFAMKGRSAE 514 >gi|326330402|ref|ZP_08196710.1| branched-chain amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] gi|325951677|gb|EGD43709.1| branched-chain amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] Length = 363 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 125/332 (37%), Gaps = 8/332 (2%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L+ F I + + A GL++++G G +SL AIG Sbjct: 18 IAFSVVLVAVFFALPVLISDATLGTLILCGAFAIGAIGLNLLIGLTGQVSLGHAAFVAIG 77 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY LG G + ++ G ++G +L+ RG+YL I T+ + + +++L Sbjct: 78 AYCTSYLGDGRGWPFLAYFATAIVLGLVAGAVIGPFALRLRGNYLVIVTIGLVFVSEHVL 137 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 W+ +T G R + S+ E M+++ + L+A + Sbjct: 138 RNWESLTRPVRGTA-PTRDAAVAIGPLDFGAGLDLGSALYTREQSMFWLTWALVALAAVV 196 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R+ + A + +RD A + K+ AFAV+SA AG +A I Sbjct: 197 AHNLTRSRVGRAMQAVRDRDLAAEVIGVEPGRTKIGAFAVASAMAAAAGVIYALGLGAID 256 Query: 258 PDM----FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC---GMNFYYFNSLL 310 +I ++I+ILGG+ ++ +++ L + Sbjct: 257 YQELSGIHGLFMSITFVAIIILGGLGTVHGSILGALLVVYGQRLIANEGAAMPILGIPVE 316 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + S + L + + +L+ L L Sbjct: 317 RGWMSTGELNGVLFGGLIIVFLLLEPRGLAAL 348 >gi|218282091|ref|ZP_03488390.1| hypothetical protein EUBIFOR_00965 [Eubacterium biforme DSM 3989] gi|218216884|gb|EEC90422.1| hypothetical protein EUBIFOR_00965 [Eubacterium biforme DSM 3989] Length = 292 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 93/289 (32%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GAY ++ + GL + + Sbjct: 8 LVNGLSLGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAYCAFLITTYCGLGFIPALLI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G G+++ + K I LI + +L G L Sbjct: 68 SMVFCGVVGVLIERIAYKPLRHATRITALITAIGVSYVLEYATQYIMGSEVRTYPKLLTS 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F V + Y+ + L + +++T + A R + ++ Sbjct: 128 A-----------SFHLGPVTITMQQVYIFVITVILMIVLQFIVQKTKMGRAMRAVSVDED 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + SA G+AG + I+P M + + + GG+ Sbjct: 177 AARLMGIDVDKTISFTFLLGSALAGVAGVLVGIYYNSINPLM-GMTPGLKAFIAAVFGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ + + + + + + + Sbjct: 236 GSIPGAMIGGLFIGIAETMVTAYGSSLYKDAIVYIILILILILKPAGLL 284 >gi|171320016|ref|ZP_02909088.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] gi|171094743|gb|EDT39785.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] Length = 603 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 122/312 (39%), Gaps = 33/312 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + Y+ +Y + A L++V G++G +SL IGAY+ +L S G Sbjct: 324 PWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGAAALLVIGAYASALLSSDLGW 383 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + IP + I+ G ++ P+ + RG Y++IATL + E+ ++ W +T G GI Sbjct: 384 SPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLAILNWDGLTRGPLGI 443 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L + Y+ + A + + L R+ + Sbjct: 444 AGIAPLPW------------------ATTARAAYWFTFAVLVAFALVQVRLLRSHLGRTL 485 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +R++ A + K AFAV G++G A I+ F +I+ + Sbjct: 486 RAVREDDVAARAHGIAPSRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDAQVSILAL 545 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++VILGG+ ++ LIG+ EL Y + + L L Sbjct: 546 TMVILGGLGNVLGGIAGAVALIGLPELFRWAADY---------------RMLIYGVVLLL 590 Query: 331 VILMRSHSLLRL 342 ++ R LL Sbjct: 591 LVRFRPQGLLGT 602 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 106/305 (34%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R G+ + + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRVGMPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVVVGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +A + +LR T + A R + Sbjct: 126 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280 Query: 337 HSLLR 341 + L Sbjct: 281 NGLFS 285 >gi|163742031|ref|ZP_02149420.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161384752|gb|EDQ09132.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] Length = 356 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 122/324 (37%), Gaps = 9/324 (2%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 F +I I+++ +++G G++S + + +GAY + + Sbjct: 28 AFAPFLFPGVRTVDTAARICIFIVLVASYDLLLGYGGIVSFAHTMFFGMGAYGVALTSTH 87 Query: 88 YGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 G + A ++ +++GL SL+ R + A+ TL ++ ++ + +T Sbjct: 88 MGRGFDALAIGAISGAALAAVLALLIGLFSLRVRAIFFAMITLAVASAVAVLVSQLSGLT 147 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF-VIYEIFMYYVLLGMCFLSASIILWLRR 203 G+ G+ F + ++ YY++ G L +L + Sbjct: 148 GGEDGLTFKTPRELGPAFKFGKETFDGTLFGVKLNGKLLTYYLIFGGSALLFLALLRVVN 207 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-K 262 + + IR+N ++ +++ +++A +S+A ++G+ +A + PD Sbjct: 208 SPFGRVLQAIRENDFRAEAIGYRVVYYRVTATCLSAAIAALSGSLYAIWLRYVGPDTTLS 267 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLLKFDCSFNM 318 + I ++ +V++GGM ++ + + + L ++ L + Sbjct: 268 MTIMIDILLMVVIGGMGTIYGAVIGATLFVLAQNYLQNLMGVLSGMTEGLPLLPELLSPD 327 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 R + + L + ++ Sbjct: 328 RWLLWLGVLFILSVYFFPSGVVGR 351 >gi|84502498|ref|ZP_01000634.1| high-affinity branched-chain amino acid transport system permease protein livh / high-affinity branched-chain amino acid [Oceanicola batsensis HTCC2597] gi|84389310|gb|EAQ02107.1| high-affinity branched-chain amino acid transport system permease protein livh / high-affinity branched-chain amino acid [Oceanicola batsensis HTCC2597] Length = 337 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 126/326 (38%), Gaps = 25/326 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + +LL + L + Y ++ + + +Y A +I+ G G SL + Sbjct: 15 ALGALILVLLTMGLPLVIANDYHVNVLVLVFLYAGMASAWNILGGMAGQFSLGHTAFFGT 74 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L + G+S W+ + ++S +I+ P+ + RG + A+ATL E + + Sbjct: 75 GAYTSTLLYNFAGVSPWIGMVAGGLLSMVFAVIIAYPAFRMRGVFFAMATLAFGEAIRIL 134 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 LI + + G+ + F + F++ Y L Sbjct: 135 LIYSRKHVDMPYGLSINWEPAFGNMIFEERSSYALLAGVFLLIVTLTAYGL--------- 185 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 R+ R IRD+++A + + K+ A +S+ F G A I Sbjct: 186 -----SRSHAGIYLRAIRDSEEAAVAAGIPMRRYKMIALLISAFFTSAGGTLLAQYVLYI 240 Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P F + ++ + + +LGG+ +++ I + + ++ + F Sbjct: 241 EPTTVFSMAYSVDLPLMALLGGIGTVAGPILGAFIALPLRDVLLDL----------FGSG 290 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 H + + L +++++ L+ Sbjct: 291 AAGLHLVVYGVLLMVIVIVLPSGLIG 316 >gi|83955040|ref|ZP_00963696.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83840369|gb|EAP79542.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] Length = 620 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 115/323 (35%), Gaps = 34/323 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L L L + + I+I+ +FA L ++G GL+S + GA Sbjct: 313 LLVMAGLFILALLPFYGGNFAVVLVTDIMIFCLFAASLHFMLGQGGLVSFGHAAFFGGGA 372 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ + + + L + ++ + +G +++G L+ G Y A+ TL ++ ++ Sbjct: 373 YAAALFVTYADTPMELALVLAPICAGLAAVVIGWVCLRSTGVYFAMLTLAFGQLLWSLAF 432 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W +T G G+ + YY+ C ++ Sbjct: 433 QWGDVTGGDDGLVNIWPSDWASDND------------------VYYYLAFVFCIGGILLL 474 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 A R RD+ + ++ + AF + G+AG F S+ I P Sbjct: 475 RQAAHAPFGYAVRAARDSARQAEAMGINTKRIQWVAFTFAGIMAGLAGGLFVFSKGSIFP 534 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + + + + +V LGG+ +LS A GV + Sbjct: 535 NELETARSFDALIVVFLGGVKTLSGGWVGGAFFEGVKDYLTRF----------------E 578 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + + + V+++ ++ Sbjct: 579 YWRLALGLLIIFVVILGPEGIVG 601 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 99/308 (32%), Gaps = 28/308 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96 I + M A GLS++ G +++ Y +GAY + + W I Sbjct: 8 ILTGLANAGALFMVASGLSLIFGVTRVVNFAHGSFYMLGAYVGYSLMQVLPGMVGFWGAI 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ +I G G+I+ + L+ + L+ + ++ + G + Sbjct: 68 LLAGLIVGLIGVIVEICVLRPVYSAPELFQLVATFGVILVIQDLALMIWGPQDLLGPRAP 127 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + +++ F++ ++ + +T + R + Sbjct: 128 GLKGV----------IRIMGEPVPQYDIALIIITPFVAIALWYLITKTRVGTLVRAATQD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + F + A G+ GA + FS V +V++G Sbjct: 178 REMVGALGVNQAWLFTGVFFLGCALAGLGGALQLPKGGA--DLLMDFSIIGSVFVVVVIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL A I+ + LM + + +V++ R Sbjct: 236 GMGSLPGAYLAAVIISVLNVFGVTYA--------------PQSTLVLMFVVMVIVLMFRP 281 Query: 337 HSLLRLRT 344 LL Sbjct: 282 FGLLGKEE 289 >gi|146319200|ref|YP_001198912.1| branched-chain amino acid ABC transporter permease [Streptococcus suis 05ZYH33] gi|145690006|gb|ABP90512.1| ABC-type branched-chain amino acid transport system, permease component [Streptococcus suis 05ZYH33] Length = 315 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + I + + L+ + A Y + QI I ++ A GL+++VG G SL Sbjct: 6 KVNAIWLAILLAGFGLIQGLVSAGILNFYYIQIVQQIGIQIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I + + V +ISGA +++G+P+L+ +GDYLAIATL Sbjct: 66 HAGFMAIGAYAVGILGKMMPTYGGFAIALIVGMLISGAVALLVGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++EI + ++I +TNG AGI ++ Sbjct: 126 GVAEIIRILIINGGSVTNGAAGIMSIPLFTSWP-------------------------LV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + + R+ + A ++R+++ A S+ F K+SAF + +AG Sbjct: 161 YIFVIITTLVTVNFLRSPMGRATISVREDEIAAESVGVNPTFVKVSAFVFGAMTAAIAGG 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A I P F F ++ V+ I++LGG+ S++ A +L + Sbjct: 221 LHAGYVGTIVPKDFAFMTSVNVLIIIVLGGLGSITGTFVAAIVLGILNVFLKSY------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL L++++R LL + S Sbjct: 275 ---------SDISMIIYSLALILLMILRPGGLLGTKEFSV 305 >gi|89902304|ref|YP_524775.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89347041|gb|ABD71244.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 358 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 80/345 (23%), Positives = 140/345 (40%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF + +++ +L + A F+ + S ++ I LI + A G++I+VG Sbjct: 18 QIFPIAQDRWAVLLLIAA------AFIVVPMLSSGYMFRAILIPFLIMSLAALGVNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG-ACGMIMGLPSLKFRGD 120 G +SL A+GAY+ R LL + + A G++ GLPSL+ +G Sbjct: 72 YCGQISLGSGAFMAVGAYAAFNFFVRVPGMPLLLALILGGLCASAFGILFGLPSLRVKGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL + ++ K TN + + + + Sbjct: 132 YLAVATLAAQFFSDWMFLRIKWFTNDA-------------PSGSVSVAGLQVFGIPIESP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Y L + + A + L R+A+ W IRD A + ++AKLSAFAVSS Sbjct: 179 TSKYLFCLTILVVLALLAKNLVRSAVGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 IG+AGA + P F + ++ +VI+GGM S+ A ++ + Sbjct: 239 IIGVAGALWGFVYLSAWEPAAFSVDLSFKLLFMVIIGGMGSIMGSFFGAAFIVILPIFLN 298 Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342 + ++ + H + + +++ H L +L Sbjct: 299 QFLPFLGRAVGVPISTVVTSHAELIVFGSLIVWFLIVEPHGLAKL 343 >gi|17546966|ref|NP_520368.1| transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429267|emb|CAD15954.1| probable transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 341 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 59/320 (18%), Positives = 116/320 (36%), Gaps = 27/320 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L Y+ G Q+LI +FA L +V+G G++SL + +GAY+ Sbjct: 32 IAFWCVPVLVFFILPDYLV-FGSQVLIVGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L + + +A ++ G + ++ + + TL + + K Sbjct: 91 GLLAAHGWGEPLSGLVAAAAVAALTGCCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ LG F + Y L + F ++ L Sbjct: 151 FLTGGVDGLSGVTMDKLLG------------SFEFDLSGRTAYVYSLAVLFGLFVLLRRL 198 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ + R I+ +L + ++AF VS+A G+AG A + + D Sbjct: 199 VRSPFGLSLRGIQQGPGRMPALGADVRMRLVAAFTVSAAVAGVAGGLLAQTTQFVGLDAL 258 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 FS + ++ +++LGG L A+ + ++ G+N + Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALVGAAVFMLAQDVLAGIN--------------PVYWQ 304 Query: 322 TLMVIALFLVILMRSHSLLR 341 + + L ++L +L Sbjct: 305 FWIGLLLMAIVLFARGGILG 324 >gi|297622818|ref|YP_003704252.1| inner-membrane translocator [Truepera radiovictrix DSM 17093] gi|297163998|gb|ADI13709.1| inner-membrane translocator [Truepera radiovictrix DSM 17093] Length = 325 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 71/305 (23%), Positives = 122/305 (40%), Gaps = 32/305 (10%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 YI ++ + A L I+VG G +SL A GAY+ L S L + Sbjct: 40 YIVYNVTLFFVFSLVAVALMILVGFTGQVSLGHAGFLAAGAYTTAYLVSVGWP-FVLALV 98 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + ++SGA G+++GLP+L+ G YLAIATL Q IL W+ + + RL Sbjct: 99 AALLVSGALGVVIGLPALRLEGPYLAIATLGFGLAIQQILNNWRLVGASTGMLADRPRLL 158 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + Y+ L + + L+R+ + A+ IRD + Sbjct: 159 GVDFFGDT----------------PFYFFTLVIVGFFVWLAFNLKRSHVGRAFVAIRDAE 202 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A + K AFA+S+A G+AG + A I+P+ F ++ + ++++GG Sbjct: 203 LAAQMSGVDVARFKTLAFALSAAMTGVAGGLYGALLGYITPESFNLILSVKFLLMIVVGG 262 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + L A + G+ + R L + + L++L+ Sbjct: 263 LGFLPGAILGAAFITGLEVVLSAQ---------------QNRSQLLFGVVVILIMLLEPR 307 Query: 338 SLLRL 342 L Sbjct: 308 GLYGR 312 >gi|124265891|ref|YP_001019895.1| putative branched-chain amino acid transport system, permease [Methylibium petroleiphilum PM1] gi|124258666|gb|ABM93660.1| putative branched-chain amino acid transport system, permease component [Methylibium petroleiphilum PM1] Length = 534 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 89/288 (30%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ + + + WL I A + + Sbjct: 262 ITYGLMGVINMAHGELIMIGAYATYLTQNAFRA--WLPDHFDWYIVAAIPLSFLAAAAVG 319 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ + + + S + Sbjct: 320 AVLERGVIRFLYGRPLETLLATWGISLVLMQGVRSLFGAQNVPVENPAWLSGGVQIMSNL 379 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + +++ + I + +T + R++ N+ + AFA+ Sbjct: 380 VLPWNRIAIVVFAAIVLGGIAFLIAKTRLGLFVRSVTQNRPMASCMGVNTARVDTLAFAL 439 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+AG A S+ + +V+LGG+ L+ A L + + Sbjct: 440 GAGVAGLAGC--AVSQVGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVYAALGLGVINKF 497 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 G ++++ + + I R L L+ Sbjct: 498 LEGWAGAVLAK-------------IIVLVFIVVFIQKRPQGLFALKGR 532 >gi|170723796|ref|YP_001751484.1| urea ABC transporter permease UrtC [Pseudomonas putida W619] gi|169761799|gb|ACA75115.1| urea ABC transporter, permease protein UrtC [Pseudomonas putida W619] Length = 359 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 100/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 A + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 ALQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 DGLPGFMTFLSWSELPWYWAGTQHFAWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + S F + ++ + +G+ S + Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTSFRTILGFDIAAQGTRAVLFLLTVGLLLASLYLC 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLTQSKFGRLLTAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + LV L ++ L Sbjct: 329 FWLFFLGALFILVTLYLPKGVVGL 352 >gi|182417308|ref|ZP_02948647.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH [Clostridium butyricum 5521] gi|237669014|ref|ZP_04528998.1| inner-membrane translocator [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378816|gb|EDT76335.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH [Clostridium butyricum 5521] gi|237657362|gb|EEP54918.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 294 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 94/303 (31%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + Q +Y + A G ++V G + L++ Y GAY+ S + Sbjct: 8 IVNGVCQGSVYALIAIGYTMVYGIIKLINFAHCDIYMFGAYAGYFAVSVLRFGFTETLLF 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + A GM++ + K + + I + + +L Sbjct: 68 AMVACAALGMLIERVAYKPLRNSPKVTLFITTMGVELLLQNLIKTD---------MLAGP 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +I + VI + +L + +++T++ A R + Sbjct: 119 NTKSFPEIIPLKSYNIGSVIISNYQIIAILTTVIFCILLQFIIKKTSVGRAMRATSYDMD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + FA+ S G AG +++P M + +LGG+ Sbjct: 179 AASLMGINTNKVISLTFALGSLLAGTAGVLVGLLYPKLTPAM-GVMPGLKSFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + I+ + L + + F L +++L++ Sbjct: 238 GIIPGAMVGGIIMGLIETLSKVYISSGLSDAIAFS-------------ILIIILLVKPTG 284 Query: 339 LLR 341 L Sbjct: 285 LFG 287 >gi|119961868|ref|YP_947058.1| branched-chain amino acid transport system, permease component [Arthrobacter aurescens TC1] gi|119948727|gb|ABM07638.1| putative branched-chain amino acid transport system, permease component [Arthrobacter aurescens TC1] Length = 322 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 113/294 (38%), Gaps = 6/294 (2%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + G GLL+ A+GAY + I + +L + ++ + S I+G+P+L+ Sbjct: 31 VHFGYSGLLNFGQAGFMAVGAYGFAISTLTFDAPFFLALLIAVLCSVIFAFILGIPTLRL 90 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 R DYLAI T+ +EI + ++ + + + +A + Sbjct: 91 RADYLAIVTIAAAEIVRYVVTTNQLTSVTGSANGLAAFEGTFYSM---NPFPEGSYMGMN 147 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + F+ V G+ + ++ L R+ + IR+++ A SL + K+ A + Sbjct: 148 NRDFFIRVVGWGLVIVCCVLVWLLMRSPWGRVLKGIREDENAVRSLGKNVYAYKMQALII 207 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 +AG F R + P + + + ++LGGM ++ I V+ L Sbjct: 208 GGVLGALAGMIFTLPRGAVQPSNYGTELTFFLWTCLLLGGMATVLGPVIGAMIFWVVLSL 267 Query: 298 CCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + S L+ +AL L+++ R + + F Sbjct: 268 TQSLLYGLIESGAITWLTTVQAGQLRYILVGVALMLLMIFRPQGVFGNKKELAF 321 >gi|161523977|ref|YP_001578989.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189351261|ref|YP_001946889.1| branched-chain amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|160341406|gb|ABX14492.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189335283|dbj|BAG44353.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 316 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-----W 93 I + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPELGNI 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFVVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|254253037|ref|ZP_04946355.1| Branched-chain amino acid ABC-type transport system [Burkholderia dolosa AUO158] gi|124895646|gb|EAY69526.1| Branched-chain amino acid ABC-type transport system [Burkholderia dolosa AUO158] Length = 540 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPAAFDWYPLVAVPASFAAAALVGIV 325 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 326 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVANPSWMSGGVTVMQSL 383 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + A L +T + R + N++ + AFA Sbjct: 384 ILPYNRLAILAFALAVVAIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 443 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L V + Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 539 >gi|311693821|gb|ADP96694.1| branched-chain amino acid transport permease [marine bacterium HP15] Length = 331 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 96/301 (31%), Gaps = 26/301 (8%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++IL + +FA +++ G GLLS A G Y+ L S Y + ++ Sbjct: 47 FLMKILCFALFAVAFNLLFGFTGLLSFGHAAFLATGGYTTGYLLSNYSGLSTEMGIIAGT 106 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 ++ R + T G+ G++ R Sbjct: 107 LAATVLGTGFALLSIRRQGIYFAMVTLALAQLVFFFFVQSEFTGGEDGMHGIPR------ 160 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + + MYY +L + ++ + + + I+ N+ Sbjct: 161 -------GELLGFINLEDNLNMYYFVLAVFIACYLLVQRIVGSPFGQVLKAIKQNEPRAV 213 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + K+ AF +S+A G+AG+ + S + + + VI + ++GGM +L Sbjct: 214 SLGYNVDRYKVLAFVISAALAGLAGSMKSVVFQLASLNDAHWHMSGEVILMTLVGGMGTL 273 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + + ++ L +L ++ Sbjct: 274 LGPVVGATFVVNIEYQLSQGALRDWVDP-------------ILGGIFVLTVLAFRSGIVG 320 Query: 342 L 342 Sbjct: 321 E 321 >gi|312862995|ref|ZP_07723234.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|311101490|gb|EFQ59694.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus vestibularis F0396] Length = 316 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 75/337 (22%), Positives = 137/337 (40%), Gaps = 42/337 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + I L + L+L + Y + + I I ++ G ++V+G G +L Sbjct: 6 KVNLIWFGLIIGLFLILKGLELSGIMNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAYS I+ +L + V +I+ +I G+P+L+ +GDYLAIATL Sbjct: 66 QAGFMAIGAYSSAIITGMMPTYGGFYLSMVVGVIIAAVVALIFGIPTLRLKGDYLAIATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 M+EI + I++ +TNG AG+ V+ Sbjct: 126 GMAEIIRIIIVNGGELTNGAAGLTGILPYTSWP-------------------------VI 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++L R+A T+R+++ A S+ + K+ F + + +AG+ Sbjct: 161 YFFVVIITILVLNFLRSATGRQAITLREDEIAAESMGVNVTKMKVIIFVIGAMISAIAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + + P F ++I + I +LGG+ S++ A +L + + Sbjct: 221 LYVSYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTIIAAVVLGIINMFLQNV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + +AL LV+L R LL + Sbjct: 275 ---------SNLRMIIYALALILVMLFRPGGLLGTKE 302 >gi|291530474|emb|CBK96059.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Eubacterium siraeum 70/3] Length = 293 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 102/307 (33%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + IY + A G ++V G +L+ +G Y + + ++ +L + Sbjct: 5 NNLINGISLGSIYAVIALGYTLVYGIAKMLNFAHGDVIMVGGYVIFYSMTSFSINPYLSV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ ++ G+++ + K +++ LI + L + G+ + + Sbjct: 65 LIAVIVCTVLGIVIEKVAYKPLRQATSLSVLITAIGVSYFLQNSALLLFGEKPVNFTSVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++ V+ ++ + + L++ +T A + ++ Sbjct: 125 NVPSISLFD---------GQVVITGEAIVAIVVSILIVIGLSLFINKTKSGRAMLAVSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + I FA+ S +AGA ++ + I + G Sbjct: 176 KDAAQLMGININRTISLTFAIGSGLAAIAGALLCSAYPTLQNTT-GAMPGIRAFVAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ ++ + L + ++ L LV++++ Sbjct: 235 GIGSVPGAMIGGILIGVIEILGRAYISPQLSDA-------------IVFAVLILVLIIKP 281 Query: 337 HSLLRLR 343 +L + Sbjct: 282 TGILGKK 288 >gi|284159966|ref|YP_001060080.2| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|283775065|gb|ABN81543.2| urea ABC transporter, permease protein UrtB [Burkholderia pseudomallei 668] Length = 542 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 268 ITYGLIGVINMAHGEFLMIGAYATYVVQTFVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 327 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 328 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 385 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 386 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 445 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 446 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 503 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 504 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 541 >gi|134294952|ref|YP_001118687.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134138109|gb|ABO53852.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia vietnamiensis G4] Length = 539 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 77/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPAAFDWYPLVAVPVSFAAAALVGIV 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVSVMQNL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 383 ILPYNRLVILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L V + Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538 >gi|300715224|ref|YP_003740027.1| ABC transporter permease [Erwinia billingiae Eb661] gi|299061060|emb|CAX58167.1| ABC transporter, permease protein (UrtB-like) [Erwinia billingiae Eb661] Length = 524 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 82/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ + + + +++ + Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYATWMVQTLFQRFAPEWLAFYPLLALPVAFFVTAAIGMA 310 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L W + + L + + Sbjct: 311 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNLEVANPPWLSGGLQVLPNL 368 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V++ + + L L +T + R + N+ + AF + Sbjct: 369 VLPYNRMAVIVFVFAVLFLTWLLLNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 428 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+ GG+ L+ A L + ++ Sbjct: 429 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVTGGVGQLAGTVVAAFGLGILNKV 486 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L+++ + L I R L + Sbjct: 487 LEPQIGAVLGK-------------ILILVLIVLFIQKRPQGLFAFKGR 521 >gi|288871321|ref|ZP_06117217.2| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Clostridium hathewayi DSM 13479] gi|288863878|gb|EFC96176.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Clostridium hathewayi DSM 13479] Length = 299 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 97/307 (31%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + +Y + A G ++V G +L+ IG Y + S GL I Sbjct: 11 SYFINGLSLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGGYVVFTVVSTMGLPPLAGI 70 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ +I G+ + + + +A LI + +L + G + Sbjct: 71 LLAVIICTVLGVTIEKVAYRPLRMASPLAVLITAIGVSYLLQNIALLVFGSNPKSFTSVV 130 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + ++ + + ++++T A + ++ Sbjct: 131 TIPALKLAG---------GRLTISGETLVTIVSCIVIMVVLTTFIKKTKAGQAMLAVSED 181 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +AG ++ ++P I + G Sbjct: 182 KGAAQLMGINVDGTIALTFAIGSALAAIAGTLLCSAYPTLTPYT-GSMPGIKAFVAAVFG 240 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + ++ L +V+L++ Sbjct: 241 GIGSIPGAFIGGLLLGVIENLSKAYISSQLSDA-------------IVFAVLIIVLLVKP 287 Query: 337 HSLLRLR 343 +L + Sbjct: 288 TGILGKK 294 >gi|218886677|ref|YP_002435998.1| branched-chain amino acid ABC transporter permease [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757631|gb|ACL08530.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 313 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 126/326 (38%), Gaps = 35/326 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + L + L Y+ + I +++ + +++ G G +S + +G Sbjct: 5 LVPLVVLAMLAGLPLLGLNSYVMHILILSIMWTLAGMAWNLLGGYCGQVSFGHAAFFGMG 64 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS ++ GLS W VS + + MG L+ RG Y +ATL + E+ + Sbjct: 65 AYSAGLIHLHLGLSPWWGFLVSLPLVALVALAMGSVVLRLRGPYFVLATLAIGEVLRITC 124 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 T G GI + + + YY++LG+ L + Sbjct: 125 ENLTDFTKGTLGI---------------------MITRTWVEKTQYYYIILGLALLGFVV 163 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + IR++Q A S+ K A VS+ G+AGAF+ I Sbjct: 164 CRAIVHSRWGYYFVAIREDQDAAESMGIDTTRYKTIALTVSAMLTGLAGAFYTNYMGYID 223 Query: 258 PDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P + +I++I +V++GG+ + A I++ + E + Sbjct: 224 PGVVFSLGEISILIIMVVMVGGVATEWGPALGAGIMVILAEYIRSL------------PL 271 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + T+ + L ++I+ + L+ Sbjct: 272 IGVAYQTMFGVLLIVIIIYLPNGLVG 297 >gi|167739817|ref|ZP_02412591.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167912168|ref|ZP_02499259.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 112] Length = 538 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 323 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 324 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 381 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 382 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 441 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 499 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 500 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 537 >gi|53720262|ref|YP_109248.1| putative branched-chain amino acid transport system permease [Burkholderia pseudomallei K96243] gi|167817040|ref|ZP_02448720.1| putative branched-chain amino acid transport system, permease component [Burkholderia pseudomallei 91] gi|167903909|ref|ZP_02491114.1| putative branched-chain amino acid transport system, permease component [Burkholderia pseudomallei NCTC 13177] gi|217421022|ref|ZP_03452527.1| urea ABC transporter, permease protein UrtB [Burkholderia pseudomallei 576] gi|254191794|ref|ZP_04898297.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|52210676|emb|CAH36660.1| putative branched-chain amino acid transport system, permease component [Burkholderia pseudomallei K96243] gi|157939465|gb|EDO95135.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|217396434|gb|EEC36451.1| urea ABC transporter, permease protein UrtB [Burkholderia pseudomallei 576] Length = 540 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 325 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 326 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 383 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 384 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 443 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 539 >gi|222109678|ref|YP_002551942.1| inner-membrane translocator [Acidovorax ebreus TPSY] gi|221729122|gb|ACM31942.1| inner-membrane translocator [Acidovorax ebreus TPSY] Length = 358 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 139/345 (40%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF + ++ + ++ + F+ + A S + ++ I ++I M A G++I+VG Sbjct: 18 QIFPITQDR------IAILLLLAVAFVAVPAMASDYFYRAILIPLVIMSMAALGVNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY R+ + + + + + G++ GLPSL+ +G Sbjct: 72 YCGQISLGSGAFMAVGAYGAFNFFVRFPGMPLVPALILGGLCATFFGILFGLPSLRVKGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL + ++ K TN V+ + Sbjct: 132 YLAVATLAAQFFSDWMFLRIKWFTNNSDSGSVSVSNLQVFGMPLDSAMAK---------- 181 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Y L + + A + L R AI W IRD A + ++AKLSAFAVSS Sbjct: 182 ---YLFCLTLLVVVALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +GMAGA +A P F + ++ +VI+GGM S+ A ++ + Sbjct: 239 IVGMAGALWAFVHLGSWEPAAFSVEVSFRLLFMVIIGGMGSIMGAFFGAAFIVVLPIFLN 298 Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342 + + H + + +++ H L +L Sbjct: 299 QFLPAVAGLFGVDISTAAVSHAELMIFGALIVWFLIVEPHGLAKL 343 >gi|83944093|ref|ZP_00956549.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] gi|83844960|gb|EAP82841.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] Length = 620 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 115/323 (35%), Gaps = 34/323 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L L L + + I+I+ +FA L ++G GL+S + GA Sbjct: 313 LLVMAGLFILALLPFYGGNFAVVLVTDIMIFCLFAASLHFMLGQGGLVSFGHAAFFGGGA 372 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ + + + L + ++ + +G +++G L+ G Y A+ TL ++ ++ Sbjct: 373 YAAALFVTYADTPMELALVLAPICAGLAAVVIGWVCLRSTGVYFAMLTLAFGQLLWSLAF 432 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W +T G G+ + YY+ C ++ Sbjct: 433 QWGDVTGGDDGLVNIWPSDWASDND------------------VYYYLAFVFCIGGILLL 474 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 A R RD+ + ++ + AF + G+AG F S+ I P Sbjct: 475 RQAAHAPFGYAMRAARDSARQAEAMGINTKRIQWVAFTFAGIMAGLAGGLFVFSKGSIFP 534 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + + + + +V LGG+ +LS A GV + Sbjct: 535 NELETARSFDALIVVFLGGVKTLSGGWVGGAFFEGVKDYLTRF----------------E 578 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + + + V+++ ++ Sbjct: 579 YWRLALGLLIIFVVILGPEGIVG 601 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 99/308 (32%), Gaps = 28/308 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96 I + M A GLS++ G +++ Y +GAY + + W I Sbjct: 8 ILTGLANAGALFMVASGLSLIFGVTRVVNFAHGSFYMLGAYVGYSLMQVLPGMVGFWGAI 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ +I G G+I+ + L+ + L+ + ++ + G + Sbjct: 68 LLAGLIVGLIGVIVEICVLRPVYSAPELFQLVATFGVILVIQDLALMIWGPQDLLGPRAP 127 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + +++ F++ ++ + +T + R + Sbjct: 128 GLKGV----------IRIMGEPVPQYDIALIIITPFVAIALWYLITKTRVGTLVRAATQD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + F + A G+ GA + FS V +V++G Sbjct: 178 REMVGALGVNQAWLFTGVFFLGCALAGLGGALQLPKGGA--DLLMDFSIIGAVFVVVVIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL A I+ + LM + + +V++ R Sbjct: 236 GMGSLPGAYLAAVIISVLNVFGVTYA--------------PQSTLVLMFVVMVIVLMFRP 281 Query: 337 HSLLRLRT 344 LL Sbjct: 282 FGLLGKEE 289 >gi|319792428|ref|YP_004154068.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315594891|gb|ADU35957.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 319 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 124/301 (41%), Gaps = 21/301 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L++ L L S+ ++LIY + A G ++++G GLLS I + +G Sbjct: 5 ITFLLALIVTLALPLFMRSG---SLASEVLIYALAALGCNLLLGYTGLLSFGQGIFFGLG 61 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +Y+ IL +R L + L + + + ++G +++ RG Y + TL +++F + Sbjct: 62 SYTIAILLTRLQLPMPLALLAAIAMGALGAAVVGWVAIRQRGTYFVMLTLAFAQMFYFVA 121 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +T G G+ R F+ T + Y + M ++ ++ Sbjct: 122 YTASGLTGGDNGLLDVPRPAFMDTPWK------------------YYAFVAVMFLIAFAL 163 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L + + IRDN+ ++ + KL AF +S A G+AG A Sbjct: 164 LLRVTDSIFGRTLLAIRDNEDRAAAVGYNLKRFKLLAFVISGAVTGLAGGLHAMMTGIAP 223 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 ++ + +++ I ++GG +L +A + + + + + L + Sbjct: 224 LSNAEYHTSEMILVITVIGGTGNLFASVLGSAFYVLLADWLSTLWPRWLLLLGLLLIGVS 283 Query: 318 M 318 + Sbjct: 284 I 284 >gi|241663650|ref|YP_002982010.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|240865677|gb|ACS63338.1| inner-membrane translocator [Ralstonia pickettii 12D] Length = 344 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 57/320 (17%), Positives = 116/320 (36%), Gaps = 27/320 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 Y+ G Q+LI +FA L +V+G G++SL + +GAY+ Sbjct: 32 IAFWCVPIAVFFLLPDYLV-FGSQVLIVGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L + + A+++ G + ++ + + TL + + K Sbjct: 91 GLLAAHGWGEPLTGLAAGAVVAALAGFCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ + F + Y L + FL + L Sbjct: 151 FLTGGVDGLSGV------------TMHKLLGTFEFDLEGRTAYLYSLVVLFLVFGGLRRL 198 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ + R I+ K ++ + ++AF VS+A G+AG A + + D Sbjct: 199 VRSPFGLSLRGIQQGPKRMPAIGANVRMRLVAAFTVSAAIAGVAGGLLAQTTQFVGLDSL 258 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 FS + ++ +++LGG L A+ + ++ G+N + Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALIGAAVFMIAQDVLAGIN--------------PVYWQ 304 Query: 322 TLMVIALFLVILMRSHSLLR 341 + + L +++L +L Sbjct: 305 FWIGLLLMVIVLFARGGILG 324 >gi|170743764|ref|YP_001772419.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168198038|gb|ACA19985.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 348 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 119/321 (37%), Gaps = 35/321 (10%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-------- 85 + Y+ + I I + A L++++G G LSL + + IGAY + Sbjct: 21 GADPYLLNALITTGILTIGAMSLNLLLGYTGQLSLGHIAFFGIGAYVSALTSLGFDVEVG 80 Query: 86 -----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 V+ +GACG ++G S + RG Y I T+ +E+ + + + W Sbjct: 81 FGYRVMHEPWPAAAGFLVAVAAAGACGYLIGRLSFRVRGAYFVIVTISFAEVVRLVALNW 140 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G + + + ++ YY++LG+ L +II Sbjct: 141 VELTQGPLALTGIPAFTLGVP---------GLGAWTLRTKLQNYYLVLGVGALCYAIIAR 191 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + R A R +++N+ S+ A VS+A G AG+ +A I PD+ Sbjct: 192 MVRARFGRAMRGLKENEPLALSVGINATRTLTVAAVVSAAMAGAAGSLYAHYLRIIDPDV 251 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F+ + ++ +V+ GG +L I + Sbjct: 252 FLFATTVTMVIMVVGGGKGTLMGPVVGGLIFGLLPVALR-------------PVMAPEAQ 298 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + I L L++ + ++ Sbjct: 299 WIVYGIVLILILFLMPRGIVP 319 >gi|27378937|ref|NP_770466.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27352087|dbj|BAC49091.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 629 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 120/333 (36%), Gaps = 33/333 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 L+ + Y ++G +I I+V+FA L ++ GL S + +GA Sbjct: 312 LAALATLVIAATLPLFAGNYALTVGSEIAIFVIFAVSLHFLMSVGGLASFGHAAYFGLGA 371 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y L GL + + + + ++ + G +++ G Y A+ TL ++I +I Sbjct: 372 YGIAFLAKMAGLPMIVCLLLGPLLGCMGAAVFGFFAVQLSGVYFAMLTLAFAQIVWSIAF 431 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W +T G GI + Y++ LG+ L + Sbjct: 432 QWVSVTGGDNGILGVWPEKW------------------AASPSHFYWLALGVAALVTVAL 473 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + A R RD+ ++ + +AF ++ G+ GA FA + + P Sbjct: 474 RAMVFSPFGYALRATRDSLLRSEAIGINAKRIQWTAFVIAGTTAGIGGALFAYLKGSVFP 533 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 D S ++ + +V+LGG+ ++S + + Sbjct: 534 DNLGISLSVDALVMVLLGGVETVSGAVIGAIVYKALNIWLVSQ---------------TD 578 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L++++ ++ + R Sbjct: 579 LSKLVLGGFIVLIVVVFPKGIVGMLEMLAQRRR 611 Score = 63.0 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 92/311 (29%), Gaps = 28/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--SRYGLSIWLLI 96 + + A GLSI+ G +++ Y IGAY L W I Sbjct: 8 FLTGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMIGAYIAFTLTERLSGAFGFWGSI 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +A+ G+I+ + L+ + L+ + ++ + G Sbjct: 68 VAAALAVALIGVIVEMVLLRRIYHAPELFQLLATFGLTLMVEDLVVLIWGPD-------- 119 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 R+ + +++ + + L +RT R + Sbjct: 120 --DLVGRRAPGFKGAIDFFGQNIPSYDLFLIGLGPVVLGILWLLFQRTRWGVLVRAATQD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L + S FAV + GA + V +V++G Sbjct: 178 RDMVAALGVNQKWLFTSVFAVGVFLAALGGALQIPRDAV--HHAMDLRIIVEVFVVVVIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ A ++ + + F L+ + + +V+++R Sbjct: 236 GLGSIVGAFVAAVLVSELNAFGILI--------------FPKISIILVFLVMAVVLIVRP 281 Query: 337 HSLLRLRTPSN 347 L + Sbjct: 282 WGLFGKPEAAA 292 >gi|91974534|ref|YP_567193.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91680990|gb|ABE37292.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 346 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 129/339 (38%), Gaps = 32/339 (9%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 ++ S + I + ++ + +L ++ ++LI +FA +I++G Sbjct: 3 ALISNPTARRTPIRMFVGLLALFAVLPWLLTAIGLG--VNLATEVLIIALFAMSYNILLG 60 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + GL S + GAY+ IL I + + + + +GL K RG Y Sbjct: 61 TTGLASFGHAAFFGSGAYAVGILQRYGLNGIVISLAAAIAAGLVASLFVGLLVRKKRGIY 120 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + TL ++F + ++W +T G+ G+ R G + S I Sbjct: 121 FGLLTLSFGQMFYIVALRWDELTGGETGLTGLKRPAPFGLDLSSH--------------I 166 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 YY L + ++ +I + + + I+ N+ L KL+A +S +F Sbjct: 167 NFYYFTLAIFMVALWLIWRITNSPFGSLLTAIKSNEVRTQYLGYDTALYKLAAIVISGSF 226 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVIL-GGMTSLSKIAKATAILIGVVELCCG 300 G+AG +A + P + E+ ++ + +L GG++S A+ +G +L G Sbjct: 227 SGLAGGLYAWFQYAAYPQNLFWIESGNIVILTLLGGGLSSFFGPILGAAVFVGAQDLISG 286 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ + +V+ + L Sbjct: 287 YTQHW---------------MFFFGLIFIVVVTTFPNGL 310 >gi|134280281|ref|ZP_01766992.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|134248288|gb|EBA48371.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 305] Length = 540 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 325 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 326 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 383 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 384 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 443 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 539 >gi|170699825|ref|ZP_02890857.1| urea ABC transporter, permease protein UrtB [Burkholderia ambifaria IOP40-10] gi|170135277|gb|EDT03573.1| urea ABC transporter, permease protein UrtB [Burkholderia ambifaria IOP40-10] Length = 539 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ + Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPAAFDWYPLVAVPVSFVAAALVGIV 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVAVMQNL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L V + Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKT 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538 >gi|73537841|ref|YP_298208.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72121178|gb|AAZ63364.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 352 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 115/307 (37%), Gaps = 12/307 (3%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L + A + +G QILI +FA L +++G G++SL + +GAY+ Sbjct: 38 FLFWLLPVAAFFALPDYLILGSQILISGLFALSLDLILGYAGIVSLGHAAFFGLGAYTAG 97 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L + + +A ++ G + ++ + TL + + K Sbjct: 98 LLAAHGWGEPLSGLLAAAAMAAVAGWLCSFLVVRGGDLTRLMVTLGIGLMLFEAANKAAF 157 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ LG F + Y L F ++ L Sbjct: 158 VTGGVDGLSGVAMDRLLGV------------FEFDLIGKTAYVYSLAATFALFLLLRRLT 205 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ + R IR+ + +L + + F +S+A G+AGA A + + D+ Sbjct: 206 QSPFGLSLRGIREGGRRMPALGADVPRRLRTTFTLSAAIAGVAGALLAQTTQFVGMDVLG 265 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F + ++ +++LGG L A+ + ++ GMN Y+ + + Sbjct: 266 FPRSAELLVMLVLGGTGRLYGALAGAALYMIAQDVLAGMNPVYWQFWIGLLLVLVVLFAR 325 Query: 323 LMVIALF 329 V+ Sbjct: 326 GGVMGAM 332 >gi|332799688|ref|YP_004461187.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp. Re1] gi|332697423|gb|AEE91880.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter sp. Re1] Length = 324 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 20/292 (6%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + +Y + + + + GL I+ G G+LS+ A+GAY+Y IL ++GL Sbjct: 23 APHITSQYEFYVVQRGVQNAIHVVGLLILTGYGGMLSMGSAALLAVGAYAYGILLVKFGL 82 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S WL + ++ ++ G + PS K G +L I T+ EI + +L+ +PIT G G+ Sbjct: 83 SPWLGMILATALTTIIGTGLAFPSFKLSGPFLVITTIGFGEIVRILLLNLEPITGGAYGL 142 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 +L+ +YY ++ + R+ + A Sbjct: 143 SGFAKLFPNVQW--------------------VYYFMVITLIFVIIGTERIGRSRLGLAL 182 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 + IR ++ S+ + AKL AF++S+ G++G F A +SPD F +E+ + Sbjct: 183 KAIRQDEVVAESMGIDVRRAKLVAFSLSAMLAGLSGVFLANLTGYMSPDSFTSAESTTYL 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 +V++GGM S+ + IL G+ E+ ++ + + Sbjct: 243 LMVVMGGMQSVIGTVISAIILTGLPEVLRFLSSSRLLVYSLILLIYLRLNWV 294 >gi|264680646|ref|YP_003280556.1| UrtA [Comamonas testosteroni CNB-2] gi|262211162|gb|ACY35260.1| UrtA [Comamonas testosteroni CNB-2] Length = 537 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 88/291 (30%), Gaps = 16/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + ++ + + Sbjct: 262 ITYGLMGVINMAHGELIMIGAYATYLVQLLFQRWLPEAWFGGYLVVAIPVAFLASALVGA 321 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + I L + +L + + + + + + Sbjct: 322 VLERGVIRFL-YGRPLETLLATFGISLVLQQTVRSLFGAQNVSVENPVWMSGGIALLPNL 380 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +++ + A + + RT + R + N+ + AFA+ Sbjct: 381 TLPYNRIAIIVFAFAVLAGVAFMIARTRLGLFVRGVTQNRAMASCVGVNTARTDTYAFAL 440 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A S+ + + +V+LGG+ L+ A L + +L Sbjct: 441 GSGIAGLAGC--ALSQIGNVGPDLGQNYIVDSFLVVVLGGVGQLAGTVYAALGLGVLSKL 498 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 G +++ + + I R + L+ S Sbjct: 499 LEGWTGAVLAK-------------IAVLLFIVVFIQKRPQGIFALKGRSAE 536 >gi|126664339|ref|ZP_01735323.1| inner-membrane translocator [Marinobacter sp. ELB17] gi|126630665|gb|EBA01279.1| inner-membrane translocator [Marinobacter sp. ELB17] Length = 315 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 65/331 (19%), Positives = 130/331 (39%), Gaps = 26/331 (7%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 KI L A++ ++ L + + + +ILI +FA +++ G G+LS Sbjct: 1 MKIKILWALLTLVIAGLIAVPWIASYFYIFIFTEILILGLFAASFNLIFGYTGMLSFGHA 60 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + IG+Y+ ++ + + VS +S +I+G ++ Y A+ TL Sbjct: 61 AFFGIGSYAMALVLIYLEWPFVVGLLVSMGVSALLALIIGFFCVRLNEVYFAMLTLAFGM 120 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + I +W+ +TNG G SL F + Y+V+L + Sbjct: 121 MVFAIAYQWRSVTNGSDG-----------LAGFSLGSFGLGLDLTLANPAVYYHVVLAIV 169 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++++++ + R++ R IR N + + +L AF ++ +F G+AG A Sbjct: 170 VIASAVLYLVCRSSFGMILRAIRQNPERVSFAGLNVRTYRLVAFVIAGSFAGLAGGLIAP 229 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 SP++ +S + I + ILGG +A+ + + + Sbjct: 230 FLRVASPELLHWSMSAEPILMAILGGTGYFLGPFVGSAVFVLLETWITSFTESW------ 283 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ I L L+++ LL Sbjct: 284 ---------MLVLGIILALMVIFFRKGLLGT 305 >gi|254459501|ref|ZP_05072917.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206676090|gb|EDZ40577.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 368 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 124/317 (39%), Gaps = 14/317 (4%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 Y+ ILI + GL ++ G GL SL A G Y I Sbjct: 34 ATPLYFVAIGDAYLLGEITGILILAIAGMGLMLLTGHTGLPSLGHATFMAFGCYIN-INM 92 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 G+ + P+S +I+G G ++ LP L+ G YLA+ATL MS + + ++ +P T Sbjct: 93 LGAGVPWVIAFPLSGLIAGVLGTMIALPVLRLHGVYLALATLAMSMLTSDFVVIAEPWTG 152 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G AG V D I F + YY++L + L L RT Sbjct: 153 GIAGAAVPD------------INIFGMEINRYSTPYKFYYLVLFVAILLVWFYRNLLRTP 200 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 ++ IRD++ + ++ + K +F +S+ G+AGA F S ++ + F Sbjct: 201 TGRSFTAIRDSEISARAMGINLTRTKAMSFFLSATAAGLAGALFGHSAGYVTNETFDLVM 260 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 +I ++ ++++GG+ + ++ + + S + + + L Sbjct: 261 SITLLLMIVIGGLGFIHGAFFGAIVVGIIPVAIAN-GRSFLQSTFDMNVNVPGLESALFA 319 Query: 326 IALFLVILMRSHSLLRL 342 L IL L Sbjct: 320 FILICFILFEPMGLYGR 336 >gi|167920133|ref|ZP_02507224.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei BCC215] Length = 519 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 245 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 304 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 305 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 362 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 363 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 422 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 423 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 480 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 481 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 518 >gi|254251637|ref|ZP_04944955.1| branched-chain amino acid ABC transporter permease protein [Burkholderia dolosa AUO158] gi|124894246|gb|EAY68126.1| branched-chain amino acid ABC transporter permease protein [Burkholderia dolosa AUO158] Length = 316 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPELGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAIVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|167895523|ref|ZP_02482925.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 7894] Length = 497 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 223 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 282 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 283 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 340 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 341 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 400 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 401 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 458 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 459 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 496 >gi|158187222|gb|ABW22842.1| putative inner-membrane translocator [Burkholderia sp. NCIMB 10467] Length = 356 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 105/301 (34%), Gaps = 11/301 (3%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 L + + + L + + + ++ Q I + A + ++ G Sbjct: 32 PLPRSASKRTIPLAIAFVLAVAGAVAPSLIQSTLVFTLLTQATITAILATSVGFLIRQNG 91 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L+S Y + Y + + S I ++ +I +G+ ++ G ++ Sbjct: 92 LVSFGHAAFYGLAGYIIALSMRGHITSPEAAIGLAVLIPTLLAFGLGMVFIRMVGVAFSM 151 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL +++ F + ++W+ + NG+ G+ V + ++ Sbjct: 152 LTLAVAQGFYELFMRWRSLANGEDGLRVDWPTSIF-----------GVHTVMFQDAGTIF 200 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + L + L + IR+N++ + + +A+S+ + Sbjct: 201 LACWFVLVLVVFGLYVLASSHFGTLTLAIRENEERVRFIGYATVVPHALVYAISAFIASL 260 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG FA +PD+ +S + V+ + I+GG S+ A + + + Sbjct: 261 AGVLFALYNGFFTPDILNWSLSGEVMIMAIIGGTRSVWGPALGAVFFFFLKNFLGDVTDH 320 Query: 305 Y 305 + Sbjct: 321 W 321 >gi|110677926|ref|YP_680933.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] gi|109454042|gb|ABG30247.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] Length = 326 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 109/310 (35%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L + + ++ + +I+ + A GL+I +G GL+SL + + +G Sbjct: 9 VVLIGLCAVPIWALLVDEPFTITLATRAVIFALAAVGLNIALGWGGLVSLGHAVFFGLGG 68 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL ++ + ++ L ++ G + L+ I Sbjct: 69 YAMGILAHHAQTFTPVMEWPFLIEGTKSMPVIWLVAMISAGVAALVIGLLSLRTAGVYFI 128 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + G S+ FP + I + + + + I Sbjct: 129 MITLAFGQMFYYFAISWAEYGGEDGLSIYVRNDFPGLNTLVPIHFFALCFVILCIVLFIN 188 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ A R ++ + KL AF +S G+AGA FA +SP Sbjct: 189 ARLIKSPFGLALNAARQVPTRVETVGMDPVRLKLVAFVISGVITGLAGALFADLNRFVSP 248 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 MF + + ++ VILGG+ L + + + G++ Y+ L + Sbjct: 249 TMFSWQMSGEIMIFVILGGVARLFGPVVGAVLFVVLEHFLGGLSNYWHIYLGLLLLIIVL 308 Query: 319 RHTTLMVIAL 328 ++ L Sbjct: 309 FARGGIIGLL 318 >gi|302545280|ref|ZP_07297622.1| ribose ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302462898|gb|EFL25991.1| ribose ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 649 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 102/310 (32%), Gaps = 27/310 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 V+ + + L G + + ++G+Q + + A+G++ V+ S G + L+ A+ Sbjct: 30 ALVLLVVAMSLLSGDFLTTDNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 88 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 A + GL +WL ++ ACG++ G + ATL M + + + Sbjct: 89 ATVLAWSATSQGLPVWLAALLAVATGVACGLVSGALVSFGKLPPFI-ATLAMLSVGRGLA 147 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + + ++ +L M + Sbjct: 148 L--------------------VISQGSPISVPDSVSGLGDTLGGWLPVPVLVMVAMGLIT 187 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L RT A I N++A + KL +A+S F +AG A+ Sbjct: 188 SGLLGRTYAGRAMYAIGGNEEAARLSGIRVGRQKLVIYALSGGFAAIAGIVLASRLSSAQ 247 Query: 258 PDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 P E + ++VI GG+ S IL + + F + Sbjct: 248 PQAAVGYELDAIAAVVIGGASLSGGVGKASGTLIGALILAVLRNGLNLLEVSAFWQQVVI 307 Query: 313 DCSFNMRHTT 322 + Sbjct: 308 GVVIALAVLL 317 >gi|221201128|ref|ZP_03574168.1| urea ABC transporter, permease protein UrtB [Burkholderia multivorans CGD2M] gi|221206419|ref|ZP_03579432.1| urea ABC transporter, permease protein UrtB [Burkholderia multivorans CGD2] gi|221173728|gb|EEE06162.1| urea ABC transporter, permease protein UrtB [Burkholderia multivorans CGD2] gi|221178978|gb|EEE11385.1| urea ABC transporter, permease protein UrtB [Burkholderia multivorans CGD2M] Length = 571 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ Sbjct: 297 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPAAFDWYPLVAVPASFAAAALVGIV 356 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 357 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 414 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 415 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 474 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ + L V + Sbjct: 475 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGSFGLGLVGKA 532 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 533 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAAKGRSAE 570 >gi|124384095|ref|YP_001028522.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|124292115|gb|ABN01384.1| urea ABC transporter, permease protein UrtB [Burkholderia mallei NCTC 10229] Length = 540 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 325 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + S + + Sbjct: 326 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 383 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 384 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 443 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 539 >gi|323528596|ref|YP_004230748.1| inner-membrane translocator [Burkholderia sp. CCGE1001] gi|323385598|gb|ADX57688.1| inner-membrane translocator [Burkholderia sp. CCGE1001] Length = 648 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 126/284 (44%), Gaps = 18/284 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + ++ILI V+FA L ++G G+ S + +GAY + L + + Sbjct: 344 PYMPVLLVEILIAVLFATSLHFIMGPGGMHSFGHAAYFGLGAYGAALFLKVLNLPMEAAL 403 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ +++ ++ G ++ G YLA+ TL ++I +++ +W +T G GI Sbjct: 404 LLAPLLAVGGALVFGWFCVRLSGVYLAMLTLAFAQIVWSVVFQWDDVTGGSNGI------ 457 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +P+ ++ + YY+ L L ++ + + + A R RD+ Sbjct: 458 ------------LGLWPADWLSSPVAFYYLTLACAVLGVWLLRRMLFSPLGYAMRASRDS 505 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + ++F ++S F G+AG+ +A S+ ISP++ S ++ + +V+LG Sbjct: 506 VLRAEAIGIDVKRVQWASFVIASLFCGLAGSLYAFSKGTISPEVISVSRSVDGLVMVLLG 565 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 G+ +L+ A+ + + Y+ L + Sbjct: 566 GLQTLTGPIVGAAVFTWLQDTVARQTDYWQALLGLAILLLVIAF 609 Score = 66.0 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 93/307 (30%), Gaps = 18/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + + A GLS++ G +++ Y G AYS WL Sbjct: 9 LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYIAYSIASRFGHTAGGFWLS 68 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +A+I G ++ + L+ + L+ + I G ++ Sbjct: 69 VLAAALIVAVLGALVEVVVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPEDLFGPRA 128 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +++ + + L RT R Sbjct: 129 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + F V + G+ GA +V++ Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A I+ + LC G+ S+ S + + + +V+++R Sbjct: 237 GGMGSIPGAFVAALIIAEIKALCIGIGH---VSIFGVGLSLSRFTLVAEFVVMAVVLVVR 293 Query: 336 SHSLLRL 342 LL Sbjct: 294 PWGLLGR 300 >gi|163856030|ref|YP_001630328.1| putative branched-chain amino acid transport permease [Bordetella petrii DSM 12804] gi|163259758|emb|CAP42059.1| putative branched-chain amino acid transport permease [Bordetella petrii] Length = 329 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 120/311 (38%), Gaps = 15/311 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ Y +FA ++++G GLLS AY+ +G L + Sbjct: 27 FAMKVMCYALFACAFNLLLGYTGLLSFGHAAFLGSAAYAAGHALKVWGFPTELGLIFGTA 86 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 ++ G+++GL +++ G Y A+ TL ++++ ++ T G+ G+ R Sbjct: 87 VAALLGLVIGLLAIRRSGIYFAMITLALAQMVFFFFLQA-HFTGGEDGLQRVPRGT---- 141 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + ++ +YY+++ + + ++ + + +R+N+ Sbjct: 142 ---------LLGFIDLRNDLNLYYLVMAIFAIGYFVVWRTVHSPFGQVLKALRENEPRTL 192 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+A G+AGA + + + +VI + ++GG+ +L Sbjct: 193 SLGYDVDRFKLLAFVLSAAIAGLAGATKTLVFVSATLSDATWQMSGLVILMTLIGGLGTL 252 Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 I++ + + + + T ++ + + +L ++ Sbjct: 253 VGPILGAFIVVLLENKVGDFGRFMADLTGSSWFLRLGESVTIVIGLIFIICVLAFRRGIV 312 Query: 341 RLRTPSNFLER 351 R Sbjct: 313 GEWLAFMERRR 323 >gi|126449653|ref|YP_001081580.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|254356321|ref|ZP_04972597.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|126242523|gb|ABO05616.1| urea ABC transporter, permease protein UrtB [Burkholderia mallei NCTC 10247] gi|148025318|gb|EDK83472.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei 2002721280] Length = 538 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 323 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + S + + Sbjct: 324 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 381 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 382 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 441 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 499 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 500 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 537 >gi|327384290|gb|AEA55764.1| Branched chain amino acid transport permease [Lactobacillus casei BD-II] Length = 269 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 73/302 (24%), Positives = 128/302 (42%), Gaps = 43/302 (14%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMI 109 A GL++++G G SL AIGAY+ I+ L +L + V +++ +I Sbjct: 1 MAVGLNLIIGFSGQFSLGHAGFMAIGAYATAIITQNISTPLGFYLAMLVGMIVAIIAALI 60 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 +G+P+L+ RGDYLAIAT+ +EI + I+ ITNG AG++ L T Sbjct: 61 VGIPTLRLRGDYLAIATMGAAEIIRVIINNL-KITNGPAGMFNIPPLASWPT-------- 111 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + + ++ I++ + A IRD+ A S+ Sbjct: 112 -----------------VYILMCVTTVIVVNFIHSRAGRAVMAIRDDDIAAESIGINPTK 154 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL+AF + +A + G+ A+ I+P F +I ++ IV+LGG+ S++ A Sbjct: 155 WKLAAFVLGAATAAIGGSLHASYLQTIAPGDFGIMNSIALLIIVVLGGVGSITGTFVAAV 214 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 +L + + + +AL L+++ + LL S Sbjct: 215 VLGIIDTVLQNF---------------GTLRMVIYALALILLMVFKPAGLLGHYELSFKR 259 Query: 350 ER 351 +R Sbjct: 260 KR 261 >gi|152981704|ref|YP_001352348.1| ABC-type branched-chain amino acid transport system, permease component [Janthinobacterium sp. Marseille] gi|151281781|gb|ABR90191.1| ABC-type branched-chain amino acid transport system, permease component [Janthinobacterium sp. Marseille] Length = 387 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 71/336 (21%), Positives = 139/336 (41%), Gaps = 20/336 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + L L + A ++ M +L+Y GL++ G +G+ + + Sbjct: 70 GLARIWMVLGLLALVAAFYDSHFVLMMICAVLLYSTACMGLTLQFGFVGVANFAGAAFFG 129 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IG+Y+ +L + GL I +S +++ G ++ LP L+ RG Y A+ T+ I Sbjct: 130 IGSYTTAVLATHTGLPQLANIAISGVVAAIIGSVLILPVLRTRGHYAALVTIAF-GILFK 188 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I+ + G G+ V F F + + + L +C + Sbjct: 189 TFIEVNDVLGGPQGLQVPGMQLFGHAFNEGFTLF----GIEFSFYVSYVLLSLVICAGAF 244 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ L R+ + + +R ++ A + I K+ AF + + F G+AG+ + Sbjct: 245 VLVKALERSWVGLSMDVVRTDETAAATFGLHIARWKVIAFTMGNLFAGIAGSVYGMMVGF 304 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I+P+ F FS++++++SI ILGG+ + + A I++ + E + Y Sbjct: 305 IAPNNFTFSDSLLLVSIAILGGLGNPVGLIPAAIIVLMLPEKLQFIQEY----------- 353 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + ++L R LL +T F + Sbjct: 354 ----RVLLYAALVIAILLFRPEGLLPRKTRLFFSRK 385 >gi|76810651|ref|YP_334500.1| branched-chain amino acid ABC transporter permease [Burkholderia pseudomallei 1710b] gi|254180950|ref|ZP_04887548.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254196025|ref|ZP_04902450.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254261462|ref|ZP_04952516.1| urea ABC transporter, permease protein UrtB [Burkholderia pseudomallei 1710a] gi|254298937|ref|ZP_04966387.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|76580104|gb|ABA49579.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|157809258|gb|EDO86428.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|169652769|gb|EDS85462.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184211489|gb|EDU08532.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254220151|gb|EET09535.1| urea ABC transporter, permease protein UrtB [Burkholderia pseudomallei 1710a] Length = 542 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 268 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 327 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 328 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 385 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 386 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 445 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 446 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 503 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 504 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 541 >gi|310659506|ref|YP_003937227.1| inner-membrane translocator [Clostridium sticklandii DSM 519] gi|308826284|emb|CBH22322.1| Inner-membrane translocator precursor [Clostridium sticklandii] Length = 288 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 118/308 (38%), Gaps = 41/308 (13%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + I I ++ GLS++ G GL S AIGAY ++ + GL + Sbjct: 4 YYVQGILILAGINLLTVLGLSLLTGFTGLFSFGHAGFMAIGAYMTTMMTVKLGLPFIPAL 63 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V + + +I+G +L +GDY IATL E + IL + G G Sbjct: 64 LVGGLSAALISLIIGKFTLNLKGDYFCIATLGFGEAIRLILDNIQYF-GGSRGWAGIP-- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++ ++ + ++ +++++ + + IR+ Sbjct: 121 -----------------------LYTTFWNVMIIDVVAIIVMVFIINSRHGRNMKAIREE 157 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + K+++ +S+ + G+AG A + P MF+ ++ + IVI G Sbjct: 158 ELASQIVGIDVFRYKMTSLGISALYAGVAGGMLAHYLGYLQPLMFQMVKSTELTIIVIFG 217 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S++ +L + E+ + +A+ +++ R Sbjct: 218 GLGSITGSVIGAILLTALPEILRDFY---------------QWRLVIYGLAVIAIMISRP 262 Query: 337 HSLLRLRT 344 L+ + Sbjct: 263 RGLMGGKE 270 >gi|254503685|ref|ZP_05115836.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222439756|gb|EEE46435.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 410 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 95/337 (28%), Gaps = 33/337 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 LL Y ++ + L Y + A + +V G G+LSL +A+G Y+ + Sbjct: 33 LLVPESSPFHVPTYAVALMGKYLTYALLALSVDLVWGFCGILSLGHAAFFALGGYAMGMY 92 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 R S + LP + D A L++ + + + Sbjct: 93 LMRQIGSRGVYGDPILPDFMVFLNWDVLPWFWYGFDMFWFAALMVVLVPGALAFVFGWFA 152 Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + D + + F ++ Sbjct: 153 FRSRVTGVYLSIITQALTYALLLAFFRNDMGFGGNNGLTDFKDILGFDIQADTTRAALFA 212 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 L I + R+ + +RD + L + KL + +S+ G+A Sbjct: 213 ASGIALGLCYIICRAITRSKLGKVLVAVRDAESRTRFLGYRVEHYKLFVWTISAMMAGIA 272 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA + I+P F + +I V+ V +GG +L ++ Sbjct: 273 GALYVPQVGIINPGEFAPANSIEVVIWVAVGGRGTLVGAILGAVLVNFAKTW-------- 324 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + +V L ++ Sbjct: 325 ------FTAVLPDIWLFALGGLFVVVTLFLPKGIVGT 355 >gi|167842030|ref|ZP_02468714.1| inner-membrane translocator [Burkholderia thailandensis MSMB43] Length = 603 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 123/312 (39%), Gaps = 33/312 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + Y+ +Y + A L++V G++G +SL IGAY+ +L S G Sbjct: 324 PWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSDLGW 383 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + IP + I+ G ++ P+ + RG Y++IATL + E+ +++ W +T G GI Sbjct: 384 SPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGI 443 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L + Y+ + A + + L R+ + Sbjct: 444 AGIAPLPW------------------ATTARAAYWFTFAVLVAFALVQVRLLRSHLGRTL 485 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +R++ A + K AFAV G++G A I+ F +I+ + Sbjct: 486 RAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILAL 545 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++VILGG+ ++ LIG+ EL Y + + L L Sbjct: 546 TMVILGGLGNVLGGIAGALALIGLPELFRWAADY---------------RMLIYGLVLLL 590 Query: 331 VILMRSHSLLRL 342 ++ R LL Sbjct: 591 LVRFRPQGLLGT 602 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 102/305 (33%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R GL + + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRCGLPLPVAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 GA G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVVAGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +A + +LR T + A R + Sbjct: 126 PDWH-----------LRIAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVDVNRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFG-------------TSYRDLFAFALLIVFLVWRP 280 Query: 337 HSLLR 341 + L Sbjct: 281 NGLFS 285 >gi|221213755|ref|ZP_03586729.1| urea ABC transporter, permease protein UrtB [Burkholderia multivorans CGD1] gi|221166544|gb|EED99016.1| urea ABC transporter, permease protein UrtB [Burkholderia multivorans CGD1] Length = 540 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPAAFDWYPLVAVPASFAAAALVGIV 325 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 326 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 383 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 384 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 443 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ + L V + Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGSFGLGLVGKA 501 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAAKGRSAE 539 >gi|121610151|ref|YP_997958.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121554791|gb|ABM58940.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 527 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 90/310 (29%), Gaps = 17/310 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S I ++ A GL+I G +G++++ IGAY+ + + + Sbjct: 235 LFSGISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATFAVQGVFRQYLPAAFDW 294 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + + +L W + Sbjct: 295 YLVAALPLAFAASALVGAVLER--GVLRFLYGRPLETLLATWGISLVLMQLVRTLFGAQN 352 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +G + + + ++ + + + RT + R + N+ Sbjct: 353 VGVENPAWMSGGVQLLPNLTLPYNRLVIIGFALAVLLGMGWIIARTRLGLWVRGVTQNRP 412 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + AFA+ S G+AG A S+ + + +V+LGG+ Sbjct: 413 IAACMGVNTARIDTLAFALGSGIAGLAGC--ALSQVGNVGPDLGQNYIVDAFMVVVLGGV 470 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L+ A L + + G +++ + + I R Sbjct: 471 GQLAGTVYAALGLGVLGKFLEGWAGAVLAK-------------IAVLVFIIIFIQKRPQG 517 Query: 339 LLRLRTPSNF 348 + + S Sbjct: 518 IFAAKGRSFE 527 >gi|237813472|ref|YP_002897923.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|237504718|gb|ACQ97036.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] Length = 540 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTFVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 325 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 326 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 383 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 384 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 443 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 539 >gi|167563794|ref|ZP_02356710.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia oklahomensis EO147] Length = 538 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYAPGAFDWYPLAAIPASFLAAAAVGIV 323 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 324 LER--TVLKHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 381 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 382 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 441 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ ++ L V + Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 499 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 500 VEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 537 >gi|260893335|ref|YP_003239432.1| inner-membrane translocator [Ammonifex degensii KC4] gi|260865476|gb|ACX52582.1| inner-membrane translocator [Ammonifex degensii KC4] Length = 307 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 70/306 (22%), Positives = 121/306 (39%), Gaps = 21/306 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ I I I+ + + L++ G GL + V + GAY+Y +L ++L Sbjct: 5 FYLADTLIFIGIFSLLSLSLNLEFGLTGLGNFGKVAFFMAGAYAYTLLA-HAAFPVYLCF 63 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 A+++G G+I+ LP+L+ R DYLAI TL EI + I+ + + G GI V Sbjct: 64 LGGALVAGLIGLIITLPALRLREDYLAIVTLSFGEILRTIVKAEEGLAGGVRGISVPAVF 123 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 S + + LG L ++ + + R IR++ Sbjct: 124 ---------------HLGSSRADALANIALTLGCLALCFLLLQAVAHSPYGRVLRAIRED 168 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A +L + K SA + S G+AG FA + I P MF + +V ++ILG Sbjct: 169 EVAVKALGKNPVSFKASALFIGSCIAGLAGGIFAQYLNFIDPTMFLPTVTFLVWMMLILG 228 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G + ++ + M + N + + LV++ R Sbjct: 229 GAGNNWGALLGGVVVELMNRGTRIM-----KDFVALPVDPNNLQFIFFGLLVILVLIFRP 283 Query: 337 HSLLRL 342 +L Sbjct: 284 QGILPE 289 >gi|331002336|ref|ZP_08325854.1| hypothetical protein HMPREF0491_00716 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410152|gb|EGG89586.1| hypothetical protein HMPREF0491_00716 [Lachnospiraceae oral taxon 107 str. F0167] Length = 293 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 100/306 (32%), Gaps = 25/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +++ +GAY+ S GL + + + Sbjct: 9 LINGLRTGSIYALIAIGYTMVYGIAKMINFAHGDIIMVGAYALYFSISVLGLPVPAALLI 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+++ + K +A LI + L + G Sbjct: 69 TVIVCSVLGVLIEKIAYKPLRKAPPLAVLITAIGMSFFLQSSSLLFFGST---------- 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +S+I V+ L + L++ +T + +A R + +++ Sbjct: 119 -PIPFQSVIPNVNIKLGPVVISSITLVTLAVTAIAMILLTLFINKTKLGSAMRAVSEDKG 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA +AG + + + I +LGG+ Sbjct: 178 AAELMGINVNSTISMTFAIGSALAAVAGILYISQYQSM-RPTLGALPGIKAFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + + + F L +V+L R Sbjct: 237 GSIPGAMLGGILLGLIESVSKAYISTELADAIVFG-------------VLIVVLLFRPSG 283 Query: 339 LLRLRT 344 LL R Sbjct: 284 LLGKRK 289 >gi|291549855|emb|CBL26117.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Ruminococcus torques L2-14] Length = 294 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 107/308 (34%), Gaps = 24/308 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IGAY +I + GL W+ I Sbjct: 5 SYLVNGLSLGSVYALIALGYTMVYGIAKMLNFAHGDVIMIGAYVALITMKQAGLPTWVAI 64 Query: 97 PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +S + G++M + R ++A LI + +L + G Sbjct: 65 LISIIACTVLGVLMERVAYKPLRNATSSLAVLITAIGVSYLLQNVALLIFGANAQTFPSV 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + G ++ + ++ + ++I ++++T A R + + Sbjct: 125 IKWSGLSLAD---------GKLNISGETIVTIVVCVVIMIALITFVQKTKPGQAMRAVSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + FA+ S +AG ++ ++P I + Sbjct: 176 DRGAAQLMGINVNATIALTFAIGSGLAAVAGVLLCSTYPSLTPYT-GAMPGIKAFVAAVF 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ +L + L ++ L +V+L++ Sbjct: 235 GGIGSIPGAFIGGILLGIIEILSKAYISSQLADA-------------IVFAVLIIVLLVK 281 Query: 336 SHSLLRLR 343 LL + Sbjct: 282 PTGLLGKK 289 >gi|207723721|ref|YP_002254119.1| transmembrane protein [Ralstonia solanacearum MolK2] gi|206588925|emb|CAQ35887.1| transmembrane protein [Ralstonia solanacearum MolK2] Length = 341 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 59/320 (18%), Positives = 116/320 (36%), Gaps = 27/320 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L Y+ G Q+LI +FA L +V+G G++SL + +GAY+ Sbjct: 32 IAFWCVPVLVFFVLPDYLV-FGSQVLIAGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L + + +A ++ G + ++ + + TL + + K Sbjct: 91 GLLAAHGWGEPLSGLAAAAAVAALAGCCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ LG F + Y L + F ++ L Sbjct: 151 FLTGGVDGLSGVTMEKLLGR------------FEFDLSGRTAYVYSLAVLFGLFVLLRRL 198 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ + R I+ +L + + AF VS+A G+AG A + + D Sbjct: 199 VRSPFGLSLRGIQQGPARMPALGADVRMRLVVAFTVSAAVAGVAGGLLAQTTQFVGLDAL 258 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 FS + ++ +++LGG L A+ + ++ G+N + Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALVGAAVFMLAQDVLAGIN--------------PVYWQ 304 Query: 322 TLMVIALFLVILMRSHSLLR 341 + + L +++L +L Sbjct: 305 FWIGLLLMVIVLFARGGILG 324 >gi|194289447|ref|YP_002005354.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis LMG 19424] gi|193223282|emb|CAQ69287.1| putative ABC-type branched-chain amino acid transport systems, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 359 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 130/329 (39%), Gaps = 26/329 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + L L S K+ + +++I +FA L +++G GL+SL + Sbjct: 22 LGWVVAFAVLAGLPLLLTADSHKFYIELLSKVMIMAIFALSLQLLIGYTGLVSLGHAAYF 81 Query: 75 AIGAYSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 A+ AY+ +L + W+L+ + S A +++G L+ RG Y + TL +++ Sbjct: 82 AMAAYATAMLAPQSGPGNGWVLLAGALAASAALALVVGALVLRTRGVYFIMVTLAFAQMV 141 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + G G Y+ R F V + Y+++ Sbjct: 142 YFVFHD-TKVAGGSDGTYIYFRPEFPVP---------GEHLLTVNDPMHFYWLVWLGLVA 191 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++++ + R+ +A IR N++ + +L AF G+AG +A Sbjct: 192 TVAVLMLVLRSRFGHALVGIRHNEQRMRAAGYATYRYQLGAFVAGGLLAGLAGFLYAIQF 251 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ++P++ + ++ + +VILGG+ SL+ + + E + ++ Sbjct: 252 GFVNPEIASWHQSGNAMLMVILGGVGSLAGAVLGAFSFVLLAEWFSTLTKHW-------- 303 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 LM + + + + L+ L Sbjct: 304 -------QLLMGGFIIVAVALLPRGLVSL 325 >gi|149374920|ref|ZP_01892693.1| inner-membrane translocator [Marinobacter algicola DG893] gi|149360809|gb|EDM49260.1| inner-membrane translocator [Marinobacter algicola DG893] Length = 315 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 127/327 (38%), Gaps = 26/327 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L+A++ ++ L + + + +ILI +FA +++ G G+LS + Sbjct: 5 VLMAILAVVIAGLIAVPWIASYFYVFIFTEILILGLFAASFNLIFGYTGMLSFGHAAFFG 64 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ ++ + + VS S +++G S++ Y A+ TL + Sbjct: 65 IGAYATALVLIHLEWPFLVCLLVSMGASALLALMIGFLSVRLNEVYFAMLTLAFGMMVFA 124 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I +W+ +TNG G +L F + Y+V+LG+ ++A Sbjct: 125 IAYQWRSVTNGSDG-----------LAGFTLGSFGLGLDLTLANPSVYYHVVLGIVAIAA 173 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ + R++ + IR N + + +L AF ++ F G+AG A Sbjct: 174 IVLYLICRSSFGMILKAIRQNPERVSFAGLNVRTYRLVAFVIAGTFAGLAGGLIAPFLRV 233 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 SP++ +S + I + ILGG +A + + + Sbjct: 234 ASPELLHWSMSAEPILMAILGGTGFFLGPFIGSAAFVLLETWITTYTESW---------- 283 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ I L ++++ LL Sbjct: 284 -----MLVLGIILAMMVIFFRKGLLGT 305 >gi|86748919|ref|YP_485415.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86571947|gb|ABD06504.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 401 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 95/326 (29%), Gaps = 32/326 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ S+ + + Y + A + ++ G G+LSL +A+G Y+ + R + Sbjct: 44 PTYLISLFGKYVCYALLALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGDRGVY 103 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA------- 148 LP D A L++ + + + + Sbjct: 104 ANPVLPDFMVFLNYKELPWYWHGFDMFWFAALMVLVVPGLLAFCFGWLAFRSRVTGVYLS 163 Query: 149 ------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + D + + F ++ + + Sbjct: 164 IITQAMTYALLLAFFRNDFGFGGNNGLTDFKDILGFNVQADGTRAALFVLSCLALGIGFL 223 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 I + + + IRD + L + KL F +S+ G+AGA + I Sbjct: 224 ICRAVVTSKLGKVLIAIRDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGII 283 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P F + +I + V +GG +L A ++ + Sbjct: 284 NPGEFAPANSIEAVIWVAVGGRGTLVGAALGAIVVNYAKTVFTS-------------GPL 330 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 ++ LV L+ ++ Sbjct: 331 APYWLFMLGALFVLVTLLLPKGIIGT 356 >gi|170747863|ref|YP_001754123.1| urea ABC transporter, permease protein UrtC [Methylobacterium radiotolerans JCM 2831] gi|170654385|gb|ACB23440.1| urea ABC transporter, permease protein UrtC [Methylobacterium radiotolerans JCM 2831] Length = 384 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 109/360 (30%), Gaps = 39/360 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGA------TKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +++ I + + L + + A Y+ ++ + L Y + A L +V G Sbjct: 8 IDRKGWIFLAVLAAFCLAVPVLNLAVPEGSGLHLPTYLVALFGKYLAYALLAVSLDLVWG 67 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G+LSL +A+G Y+ + R + + LP + D+ Sbjct: 68 YCGILSLGHGAFFALGGYAMGMYLMRQIGARGVYGNPVLPDFMVFLNYKALPWYWYGFDH 127 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162 A A L++ + + + + + D Sbjct: 128 FAFAALMVLLVPGLLAFLFGWLAFRSRVTGVYLSIITQALTYALMLAFFRNDMGLGGNNG 187 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + F P + + ++ L I + +A +RD + Sbjct: 188 LTDFKDFLGLPVQSQTFRVGIFVATGIALALGYLIARVMTVSAYGKILIAVRDAESRTRF 247 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L K AF VS+ G+AGA + I+P F + +I + V +GG +L Sbjct: 248 LGYRPEHFKTLAFTVSAMMAGVAGALYVPQVGIINPGEFAPTNSIETVIWVAVGGRGTLV 307 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A ++ + G + + +V L L+ Sbjct: 308 GAALGAVLVNYAKTVLTG--------------AMPDAWLFALGALFVVVTLFLPRGLVGT 353 >gi|322368550|ref|ZP_08043118.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haladaptatus paucihalophilus DX253] gi|320551834|gb|EFW93480.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haladaptatus paucihalophilus DX253] Length = 657 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 62/312 (19%), Positives = 123/312 (39%), Gaps = 22/312 (7%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 +G + ++S+ + L++ +FA L V+G GL+SL V+ + +GAYS V+ Sbjct: 339 IGVLYTSYEVNSLLLTTLVWALFALSLDFVMGYAGLVSLGHVLFFGLGAYSTVLTVEHGM 398 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 S+++ + V +++ +G S++ G Y ++ TL +E+F ++ K + Sbjct: 399 PSVFVALGVGMVVAALVAWAVGHLSIRVSGVYFSMITLGFAELFFQLVQKVGFTGGSEG- 457 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 L+ S + YY +L S + + + Sbjct: 458 ------LFGFDPVYGLTSGPEVGDVSLLGDIELYYYFVLAAVVGSYLLARRMMNAPFGSV 511 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + IR++++ + + K AF VS G+AG A +SP +F + + V Sbjct: 512 LQGIRESEERASFIGYDVTAYKRRAFVVSGGLAGLAGGLSAIHTGGVSPSVFAWINSGEV 571 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 I + ILGGM +L + G+ EL + ++ + Sbjct: 572 IVMTILGGMGTLYGPMIGAGVFFGLQELLQSFTEQWQG---------------ILGVVFV 616 Query: 330 LVILMRSHSLLR 341 L ++ L+ Sbjct: 617 LFVIYVPEGLVS 628 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 96/305 (31%), Gaps = 21/305 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96 + + +YV+ A GLSI+ G + +++ +A+GAY V + G WL + Sbjct: 9 LLNGLTIGAVYVLLAAGLSIIFGVMDVINFAHGEFFALGAYLAVAIVAVGTGGGMFWLAL 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V+ ++ ++ +++ + ++++ I G A Sbjct: 69 LVAPLVVALIAAVIERGTIRPLYGRNPLYHILLTFGLVLIFEDVISFVWGDNAKQFAQPP 128 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G Y + ++V+ ++ L L RT R + Sbjct: 129 LLRGP----------VDLLGFSYSKYNFFVIAIGVVMAVGTWLLLNRTRFGLVVRAGAQD 178 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ L I FA + +AG A + S I IV+LG Sbjct: 179 REMVRHLGIDIDRYYTLVFAFGAFLAALAGIVLGAKQSV--NPGMGNSVIIPAFVIVVLG 236 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S + + D ++ + + V+L+R Sbjct: 237 GLGSFRGAVVGGFGVGLIETFLRS-------PPFGLDAFLPNLEGLVIFLLMIGVLLVRP 289 Query: 337 HSLLR 341 L Sbjct: 290 QGLFG 294 >gi|119896966|ref|YP_932179.1| ABC transporter permease [Azoarcus sp. BH72] gi|119669379|emb|CAL93292.1| ABC transporter permease protein [Azoarcus sp. BH72] Length = 543 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 87/290 (30%), Gaps = 17/290 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ +GAY+ ++ + + + + + Sbjct: 269 ITYGVMGIINMAHGELLMVGAYATFLVQGLFRSYLPAYLDWYVVAAIPVAFFAAALVGVA 328 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + +++L W V L + ++ V Sbjct: 329 MER--LVLRHLYGRPLESLLATWGLSLVLIQAARVVFGPQNLELANPGWMSGGMELAAGV 386 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ I L +++T + R + N+ + AFA+ Sbjct: 387 VLPYNRIVIIGFAVFVLVLIWLMMQKTRLGMFVRAVTQNRPMAGCVGVPTARVDTLAFAI 446 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ + +V+LGG+ L+ A L V + Sbjct: 447 GSGVAGLGG--LALSQIANVGPAMGQGYIVDAFMVVVLGGVGQLAGAVWAALGLGIVAKF 504 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 G L+++ + + I R + L+ Sbjct: 505 LEGWAGAVIAK-------------ILVLVFIIVFIQKRPQGIFALKGRFA 541 >gi|329917431|ref|ZP_08276481.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480] gi|327544542|gb|EGF30047.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480] Length = 358 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 77/345 (22%), Positives = 144/345 (41%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF LR ++ + + + F+ + S+ + ++ I L+ + A GL+I+ G Sbjct: 18 QIFPLRQDR------IGMAIVLAIAFIGIPVLGSEYWFSAILIPFLVLALAALGLNILTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GAY+ R L+ ++ + + A G++ GLPSL+ +G Sbjct: 72 YAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPILVSFILAGLCAAAVGVLFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL +L K+ +N + ++ + + + Sbjct: 132 YLAVATLAAQFFVIWVLTKFSWFSNDSSSGVISAQKLEMFGYAINTPMKK---------- 181 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Y +L + + A I L R+ AW +RD A + ++ KL AFAVSS Sbjct: 182 ---YIFVLAIVTVMALIAKNLVRSGTGRAWMAVRDMDVAAEVIGIPLMKTKLIAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 + G+AGA +A + PD F + ++ ++I+GG+ S+ +A ++ L Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGAFLGSAFILLFPILLD 298 Query: 300 GMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L + + + + +++ H L R+ Sbjct: 299 NFLPPLATLLHLPLTGSAVSHIQMMMFGALIIFFLIVEPHGLARM 343 >gi|221199274|ref|ZP_03572318.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD2M] gi|221205824|ref|ZP_03578839.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD2] gi|221174662|gb|EEE07094.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD2] gi|221180559|gb|EEE12962.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD2M] Length = 316 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-----W 93 I + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPELGNI 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAIVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|170016904|ref|YP_001727823.1| branched chain amino acid ABC transporter permease [Leuconostoc citreum KM20] gi|169803761|gb|ACA82379.1| Branched-chain amino acid ABC-type transport system, permease component [Leuconostoc citreum KM20] Length = 292 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 103/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GAY L+ ++ + + Sbjct: 8 LINGIILGSVYALLALGYTMVYGIIKLINFAHGDVYMLGAYFGYFFIQVLHLNFFIALVL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S +S GM++ + + IA LI + +L G Sbjct: 68 SMAVSALLGMLIEFVAYRPLRHSPRIAVLISALGVSFLLENGMSYFYGSD---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 IR ++ + ++ L + + +++T + A R + +Q+ Sbjct: 118 -KKAFPQAIRTIQYHIGSLQISNIQLLIISTAITLMILLTIIVQKTKMGRAMRAVSADQE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G + I P M + I +LGG+ Sbjct: 177 AAILMGIDVNRTISFTFAIGSALAAAGGVLIGLYYNNIDPLM-GMTPGIKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + + + ++ L +++L + Sbjct: 236 GLIPGAALGGWLIGILETMTQAIG-------------LSDYKDAVVYAILIIILLFKPTG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|121599417|ref|YP_992077.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|238561069|ref|ZP_00442747.2| urea ABC transporter, permease protein UrtB [Burkholderia mallei GB8 horse 4] gi|251766563|ref|ZP_02264245.2| urea ABC transporter, permease protein UrtB [Burkholderia mallei PRL-20] gi|254202446|ref|ZP_04908809.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei FMH] gi|121228227|gb|ABM50745.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|147746693|gb|EDK53770.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei FMH] gi|238525486|gb|EEP88914.1| urea ABC transporter, permease protein UrtB [Burkholderia mallei GB8 horse 4] gi|243065449|gb|EES47635.1| urea ABC transporter, permease protein UrtB [Burkholderia mallei PRL-20] Length = 538 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 323 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + S + + Sbjct: 324 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 381 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 382 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 441 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPNLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 499 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 500 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 537 >gi|88855850|ref|ZP_01130513.1| branched-chain amino acid ABC-type transport system permease component [marine actinobacterium PHSC20C1] gi|88815174|gb|EAR25033.1| branched-chain amino acid ABC-type transport system permease component [marine actinobacterium PHSC20C1] Length = 426 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 108/308 (35%), Gaps = 25/308 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + L+ + A G+S+V G+ GL + GA +I+ G IWL IP+ Sbjct: 141 IVNGLNFGLMLGLAAIGISLVYGTTGLSNFAHAEMVTFGAVMALIVSVDLGWPIWLAIPI 200 Query: 99 SAMISGACGMIMGL-PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + ++S G + R + + L++ I ++ +++ G Sbjct: 201 AVLLSAGFGWSLDAGLWKPLRKKGVGVVQLMIVSIGLSLALRYTFQYFRGGGTEQLPGSD 260 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + + ++ I + + WL RT I A R + DN Sbjct: 261 SPDIPLFGSVSLSQTNMISMVISIVVICI----------FAWWLVRTKIGKATRAVSDNP 310 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + + + +++A G+AG +A R I DM ++V + V LGG Sbjct: 311 SLAAASGIDVDQVVRVVWILAAAMAGLAGVLWAYFRPGIRWDM-GAQILLLVFAAVTLGG 369 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + + + I+ +VE + + L +++L R Sbjct: 370 LGTAFGALVGSIIVGILVETSSLFIPSDLKYVGAL-------------VVLIVILLFRPQ 416 Query: 338 SLLRLRTP 345 +L Sbjct: 417 GILGRSER 424 >gi|53726290|ref|YP_103743.1| branched-chain amino acid ABC transporter permease [Burkholderia mallei ATCC 23344] gi|52429713|gb|AAU50306.1| branched-chain amino acid ABC transporter, permease protein, putative [Burkholderia mallei ATCC 23344] Length = 540 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 325 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + S + + Sbjct: 326 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 383 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 384 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 443 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPNLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 539 >gi|192361718|ref|YP_001981454.1| ABC transporter permease [Cellvibrio japonicus Ueda107] gi|190687883|gb|ACE85561.1| ABC transporter permease protein [Cellvibrio japonicus Ueda107] Length = 408 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 96/348 (27%), Gaps = 36/348 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + L+ L + + ++ + L Y A GL + G G+LSL + + + Sbjct: 15 ILGFIVLALILLVVLPLSLDIFRLNLVGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFGL 74 Query: 77 GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 G Y+ + + L Sbjct: 75 GGYTMAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPFFWEPFHSFGFTLLAIILVP 134 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174 + + +A L L + + Sbjct: 135 CLFGYIIGVAMFKRRVGGVYFAIITQALAAILTILIIGQQGYTGGVNGITDLRTLQGWDI 194 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + F YY+ + + F+ I ++R++ + +RD + + K+ Sbjct: 195 RTDSAKYFFYYLCVVLLFVCLFIAQFIRKSKLGRLLVAMRDKEDRVRFSGYDVSNFKIFV 254 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F + + F + GA F +SP + +I ++ +GG S+ I+ Sbjct: 255 FCIGAVFAAVGGAMFTLQVGFMSPTLVGIVPSIEMVIFCAVGGRLSIVGAVYGALIVNYA 314 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F SF M V++ + L L Sbjct: 315 KT--------------SFSESFPELWLFAMGGLFIAVVMAFPNGLAGL 348 >gi|94312447|ref|YP_585657.1| inner-membrane translocator [Cupriavidus metallidurans CH34] gi|93356299|gb|ABF10388.1| ABC-type transporter, permease component [Cupriavidus metallidurans CH34] Length = 344 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 126/298 (42%), Gaps = 15/298 (5%) Query: 46 ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105 +L + +FA ++++G GLLS + Y+ +G++ L + + A Sbjct: 52 VLCFALFACAFNLLIGFTGLLSFGHAAFFGGAGYAAGHAMKVWGVTPELGLIFGTLSGAA 111 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 G ++G +++ +G Y ++ TL ++++ ++ P+T G+ G+ R Sbjct: 112 IGYVVGSLAIRRQGIYFSMITLALAQMLFFFCLQ-VPLTGGEDGLQGIPR---------- 160 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 + ++ +YYV L + + ++I+ + + IR+N+ SL Sbjct: 161 ---GKLLGVLPLSDDLTLYYVALVIIVAAFALIVRTVHSPFGQILKAIRENEPRAISLGY 217 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + KL AF +S+A G+AG+ A + +S + VI + ++GG+ +LS Sbjct: 218 DVDRFKLLAFVLSAALSGLAGSIKALVLGFETLTDVHWSMSGSVILMTLVGGLGTLSGPI 277 Query: 286 KATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +++ + + + + + L + S T + + + +L ++ Sbjct: 278 VGAFVVVALENKLGDIGTFLASVTGLDWFNSLGESVTMVTGVIFVICVLTFRRGIMGE 335 >gi|170697684|ref|ZP_02888772.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|170137432|gb|EDT05672.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] Length = 316 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDSTPGAVISVTEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|226830772|ref|YP_001067342.2| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|242316388|ref|ZP_04815404.1| urea ABC transporter, permease protein UrtB [Burkholderia pseudomallei 1106b] gi|210148315|gb|ABN92584.2| urea ABC transporter, permease protein UrtB [Burkholderia pseudomallei 1106a] gi|242139627|gb|EES26029.1| urea ABC transporter, permease protein UrtB [Burkholderia pseudomallei 1106b] Length = 542 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 268 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 327 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 328 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 385 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 386 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 445 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 446 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 503 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 504 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 541 >gi|117923801|ref|YP_864418.1| inner-membrane translocator [Magnetococcus sp. MC-1] gi|117607557|gb|ABK43012.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Magnetococcus sp. MC-1] Length = 307 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 16/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + IY + A G ++V G +G+++ Y I AY I + + + Sbjct: 10 LVNGVVLGSIYGLIAVGYTMVYGIIGMINFAHGEIYMISAYLTAITLAVLTTWGVDSVFL 69 Query: 99 SAMISGACGMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++ + R Y + + + + N + Sbjct: 70 ALILTLISSIAFTALYGWTVERIAYRPLRRSTRLAPLISAIGMSLVLQNYVRLAQGSRNQ 129 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +L P FV ++L + +++TA+ A R + + Sbjct: 130 GVPSLMEGNLRLVGENPEQFVQVTYVQLVIVLTALISMGILSWTIQKTALGRACRATQQD 189 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L F + ++ +AG + + F I + +LG Sbjct: 190 RVMAELLGVNTDRIISVVFVLGASMAAVAGVLVTVNYGSFDFHV-GFVTGIKAFTAAVLG 248 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL IL G + + F L LV++ + Sbjct: 249 GIGSLPGAMLGGLILGLSESFFAGFVNSDYKDVFAFS-------------ILVLVLIFKP 295 Query: 337 HSLLRL 342 LL Sbjct: 296 SGLLGR 301 >gi|91786507|ref|YP_547459.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91695732|gb|ABE42561.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 358 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 74/345 (21%), Positives = 134/345 (38%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF + ++ L+ ++ L F+ + S ++ I LI + A G++I+VG Sbjct: 18 QIFPIAQDR------LVVALFLLFAFIAVPMLASDYLFRAILIPFLIISLAALGVNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY R + + + + + G++ GLPSL+ +G Sbjct: 72 YCGQISLGSGAFMAVGAYGAYNFFVRLPGLPLIPALILGGLCATFFGILFGLPSLRVKGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL + ++ K + + + + Sbjct: 132 YLAVATLAAQFFADWMFLRIKWF-------------TLDSPSGSVSVSNLQVFGFPIESA 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Y++ L + + A + L R AI W IRD A + ++AKLSAFAVSS Sbjct: 179 HSKYWLCLSILVVMALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +GM+GA + P F ++ ++ +VI+GGM S+ A + + Sbjct: 239 IVGMSGALWGFVYLGAWEPAAFSVDQSFRLLFMVIIGGMGSILGGFLGAAFITVLPIALN 298 Query: 300 GMNF--YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +++ H L +L Sbjct: 299 QFLPVLAQLLGFEISTAGISHAELMIFGGLIVWFLIVEPHGLAKL 343 >gi|295401399|ref|ZP_06811370.1| inner-membrane translocator [Geobacillus thermoglucosidasius C56-YS93] gi|294976614|gb|EFG52221.1| inner-membrane translocator [Geobacillus thermoglucosidasius C56-YS93] Length = 292 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 103/303 (33%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ + +GA+ + + + + + Sbjct: 7 LVNGISLGSIYALIALGYTMVYGIVRLINFAHGDVFMVGAFVGFYAITGLHVGFFPALLM 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+ + + + + IA LI + + G Sbjct: 67 AMAVCAVLGVCIERIAYRPLRNATRIAALITAIGVSLFIEYGTIYIRGAQ---------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ + V+ ++L L + L + +T I A R + + + Sbjct: 117 PEAYPSTLLPDKKIEVFGVMISSQSLWILATSIVLMILLQLIVHKTKIGKAMRAVSYDAE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + FA+ SA G AG F +I P M + +LGG+ Sbjct: 177 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYVKIEPLM-GIIPGLKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + +L + L G+ + + + F I L L+++ R Sbjct: 236 GIIPGAMVGGLVLGVIESLVSGLGYSLWRDGVAF-------------IVLILILIFRPSG 282 Query: 339 LLR 341 L Sbjct: 283 LFG 285 >gi|220912002|ref|YP_002487311.1| inner-membrane translocator [Arthrobacter chlorophenolicus A6] gi|219858880|gb|ACL39222.1| inner-membrane translocator [Arthrobacter chlorophenolicus A6] Length = 431 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 98/338 (28%), Gaps = 24/338 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 ++ + + A +++ + + L+ + + GLS++ G+ GL + Sbjct: 116 FSQTSNLSVIFAFGKGIVVQQQDFGQNLLNRLVAGLSFGLLLALASVGLSLIFGTTGLTN 175 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +GA + LI R + + Sbjct: 176 FAHGEMVTLGAVLVFGFNAIGLPFWLSLILSLVGGGLFGYAQDRGLWRPLRRRGTGLVPM 235 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ I + +++ + T + V + L Sbjct: 236 MIVSIGLALAVRYV-----------IQFYFGGATQQLPYAQSPEVQIGPVSISPNNLWSL 284 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + A I + L +T + A R + DN + + + + G Sbjct: 285 GISAVVIALIGIVLLKTRLGKATRAVADNPALAAASGIDVDAVIRLVWITGGMLASLGGI 344 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A R ++ DM +++ + V LGG+ ++ + I+ VEL Sbjct: 345 LWAYYRPGVTFDMGSAIL-LLIFAGVTLGGLGTVFGALIGSIIVGIFVELTTVFGLA--- 400 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + +V+L R +L R Sbjct: 401 ---------ADLKYVGALFIMIVVLLFRPQGILGRRER 429 >gi|254249056|ref|ZP_04942376.1| Branched-chain amino acid ABC-type transport system, permease component [Burkholderia cenocepacia PC184] gi|124875557|gb|EAY65547.1| Branched-chain amino acid ABC-type transport system, permease component [Burkholderia cenocepacia PC184] Length = 604 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 124/312 (39%), Gaps = 33/312 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + Y+ +Y + A L++V G++G +SL IGAY+ +L S G Sbjct: 325 PWLGASPYVLQTLTSAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSDLGW 384 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + IP + I+ G ++ P+ + RG Y++IATL + E+ +++ W +T G GI Sbjct: 385 SPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGI 444 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L + Y+ + + A + + L R+ + Sbjct: 445 TGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQVRLLRSHLGRTL 486 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +R++ A + K AFAV G++G A I+ F +I+ + Sbjct: 487 RAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILAL 546 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++VILGG+ ++ LIG+ EL Y + + L L Sbjct: 547 TMVILGGLGNVLGGIVGAIALIGLPELFRWAADY---------------RMLIYGLVLLL 591 Query: 331 VILMRSHSLLRL 342 ++ R LL Sbjct: 592 LVRFRPQGLLGT 603 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R+GL + + + Sbjct: 7 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 66 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 67 AAVVIGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 126 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +A + +LR T + A R + Sbjct: 127 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 176 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 235 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 281 Query: 337 HSLLR 341 + L Sbjct: 282 NGLFS 286 >gi|187929531|ref|YP_001900018.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|309781693|ref|ZP_07676426.1| inner-membrane translocator [Ralstonia sp. 5_7_47FAA] gi|187726421|gb|ACD27586.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|308919334|gb|EFP64998.1| inner-membrane translocator [Ralstonia sp. 5_7_47FAA] Length = 344 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 119/320 (37%), Gaps = 27/320 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 Y+ G Q+LI +FA L +V+G G++SL + +GAY+ Sbjct: 32 IAFWCVPIAVFFLLPDYLV-FGSQVLIVGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L + + A+++ G + ++ + + TL + + K Sbjct: 91 GLLAAHGWGEPLTGLAAGAVVAALAGFCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ LGT F + Y+ L + FL + L Sbjct: 151 FLTGGVDGLSGVAMRNLLGT------------FEFDLEGRTAYFYSLVVLFLVFVGLRRL 198 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ + R I+ K ++ + ++AF VS+A G+AG A + + D Sbjct: 199 VRSPFGLSLRGIQQGPKRMPAIGANVRMRLVAAFTVSAAIAGVAGGLLAQTTQFVGLDSL 258 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 FS + ++ +++LGG L A+ + ++ G+N + Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALIGAAVFMIAQDVLAGIN--------------PVYWQ 304 Query: 322 TLMVIALFLVILMRSHSLLR 341 + + L +++L +L Sbjct: 305 FWIGLLLMVIVLFARGGILG 324 >gi|325672709|ref|ZP_08152405.1| ribose ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] gi|325556586|gb|EGD26252.1| ribose ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] Length = 661 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 95/298 (31%), Gaps = 28/298 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 G + + ++G+Q + + A+G++ V+ G + L+ + + G+ Sbjct: 56 GDFLTTNNLLNVGVQASVTAVLAFGMTFVI-VSGGIDLSVGSIAGLSGIVTGWTATTAGV 114 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 +WL + G++ G+ R ATL M + + + + Sbjct: 115 PMWLAVLAGMASGVLAGVVSGILITAGRMPPFI-ATLAMLSVARGLALVIADGR------ 167 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + F+ Y +L + + + L LRRT A Sbjct: 168 -------------PIPVDGWLATLGSGELFGFLPYPVLVLIAAAIATGLILRRTYAGRAM 214 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 I N +A + ++ +A+S F +AG AA P+ + I Sbjct: 215 YAIGGNAEAARLSGIRVNRQQVLVYALSGLFAAVAGILLAARLASAQPEA-GTGYELDAI 273 Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + V++ GG+ + IL + ++ F + Sbjct: 274 AAVVIGGASLSGGVGTAVGTLIGALILAILRNGLNLLDVSAFWQQVVIGAVIAAAVLF 331 >gi|70734141|ref|YP_257781.1| branched-chain amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348440|gb|AAY96046.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 359 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 97/324 (29%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 PLQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 DGLPAFMTFLSWSELPWYWAGTEHFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F + ++ + + S + Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFGITEPGTRAVLFLATVALLVGSLYLG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLARSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIVVTLYLPKGVIGL 352 >gi|254175677|ref|ZP_04882337.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254207778|ref|ZP_04914128.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei JHU] gi|147751672|gb|EDK58739.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei JHU] gi|160696721|gb|EDP86691.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei ATCC 10399] Length = 542 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 268 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 327 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + S + + Sbjct: 328 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 385 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 386 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 445 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 446 GAGIAGLGGC--ALSQIGNVGPNLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 503 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 504 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 541 >gi|312198718|ref|YP_004018779.1| inner-membrane translocator [Frankia sp. EuI1c] gi|311230054|gb|ADP82909.1| inner-membrane translocator [Frankia sp. EuI1c] Length = 656 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 125/298 (41%), Gaps = 37/298 (12%) Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVI--------LGSRYGLSIWLLIPVSAMISGACGM 108 ++VVG GLL L + +AIGAY+ + ++ +L +PV+ ++ G+ Sbjct: 342 NVVVGYAGLLDLGYIAFFAIGAYTAAYLCSATAMPWHAPVRINPFLAMPVAVAVAALAGI 401 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 +G P+L+ RGDYLAI TL EI Q + IT G G++ L + Sbjct: 402 ALGAPTLRLRGDYLAIVTLGFGEIVQLLANNADGITGGARGVFGVPPLS---------VH 452 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 F ++ + + YY+L+ + L +++ R+ AW IR ++ A + + Sbjct: 453 AGGFHYAWGLEPLPYYYLLVVLVILVMAVLGVWERSRTGRAWAAIRQDEVAAEATGVRTM 512 Query: 229 FAKLSAFAVS---SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 KL AFA+ S F G A++ +P F +++V+++VI GGM S + Sbjct: 513 RMKLLAFAIGASVSGFAG----VVLATKQFFNPQTFSLQASLLVLTVVIFGGMGSRLGVV 568 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 +L G+ + ++++ R LL R Sbjct: 569 VGAVVLQGLAFFLRDRVPA-------------ADRFIYFGAIVMIMMVFRPQGLLPPR 613 >gi|296273328|ref|YP_003655959.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299] gi|296097502|gb|ADG93452.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299] Length = 318 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 78/324 (24%), Positives = 139/324 (42%), Gaps = 30/324 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L+ + + S+GI L++ + A+ I++G G+ ++ I + +GA Sbjct: 6 IIATLFLVVMAVFPFLVDSAWLSIGITFLVFAVVAFSQDIILGRAGVFNMGHAIFFGMGA 65 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL YG I IP + +I +++ P + RGDYL +AT+ + IF+ +L Sbjct: 66 YTTAILNVHYGFEIIQTIPFAILIPVVFSVLLAGPIIHLRGDYLLVATIGFNIIFEQVLS 125 Query: 139 K-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +T G GI+ D G + S +YY+ + ++ I Sbjct: 126 NDVFGLTGGPNGIFGIDFFRVFGYELTSDT--------------AVYYIAFALLIVTLLI 171 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I L + A I N+ A S+ I + KL AFA+ +A G AG FA +S Sbjct: 172 IRNLDTSRYGRALYYINKNEIAAKSMGINISYYKLFAFALGAAIAGAAGCVFAIQYSAVS 231 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F ++++ +IV++GG SL I T ++ + EL Sbjct: 232 PESFNFMQSVMFFAIVLVGGSASLPGIIIGTFVMFVLPELFTEFKES------------- 278 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + A+ L +++R + + Sbjct: 279 --RYLIFGAAMVLTMILRPNGVWP 300 >gi|239813202|ref|YP_002942112.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239799779|gb|ACS16846.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 642 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 62/341 (18%), Positives = 133/341 (39%), Gaps = 35/341 (10%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M LR + + A+ L+ L T Y + I +LI +FA L ++ Sbjct: 309 MQEEPLRRASKGYLWLVAALGVALMAMPLL--TADSPYTTVLMIDLLIAALFAASLHFIM 366 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G+ S + +GAY +L G+ + + + V+ +++ + G +++ G Sbjct: 367 GPAGMHSFGHAAYFGLGAYGAALLVRTSGMPMEIALIVAPLVAAIGAFVYGWFAVRLSGV 426 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ TL ++I ++ +W T G G+ +L Sbjct: 427 YLAMLTLAFAQITWAVVYQWDSFTGGSNGLTGVWPSEWLSDKRT---------------- 470 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Y++ L + ++ + + A R RD+ ++ + + +AF ++ A Sbjct: 471 --YYWLTLVLVAAGILMLRRVLFSPFGYALRAGRDSVLRADAIGIDVKRMQWTAFVIAGA 528 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA +A S+ ISP+ +++ + +V+LGG+ +L+ + + Sbjct: 529 AAGLAGALYAFSKGSISPESLSVDKSVDGLVMVLLGGIQTLAGPVVGAVTFSWLHDTVAR 588 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 Y+ + + + L++L+ + Sbjct: 589 NTDYWRAT---------------LGAIILLLVLLFPQGIAG 614 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 97/305 (31%), Gaps = 16/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYGLSIWLLIP 97 + + GLS++ G +++ + +G Y L L W + Sbjct: 10 FLTGLSSASSLFLVGAGLSLIFGVTRIVNFAHGSFFMVGIYLAYTLVDKLGTLGFWPAVL 69 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++A+ G G ++ + L+ + L+ + ++ G + Sbjct: 70 IAALAVGVIGALIEMVLLRRIYKSPELFQLLATFALVLVIKDAVLYVWGPDELLGPRAPG 129 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 G + + ++++ + + L L RT R ++ Sbjct: 130 LSG----------SVDILGRQFPTYDLFLIVVGPVVLGLMWLLLTRTRWGTLVRAATQDR 179 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + +L + + FA+ + + GA + +V++GG Sbjct: 180 EMVSALGVNQAWLFTAVFALGATLAALGGALQLPREPA--TLAMDLNTIGAAFVVVVVGG 237 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 M S+ A +L E+ + + + SF+ + I + +V++ R Sbjct: 238 MGSIPGAYVAALLL---SEIKAVCIWLGVVEIFGYSVSFSKLTLVVDFIVMAIVLVWRPW 294 Query: 338 SLLRL 342 LL Sbjct: 295 GLLGR 299 >gi|78067298|ref|YP_370067.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77968043|gb|ABB09423.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia sp. 383] Length = 316 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|325972008|ref|YP_004248199.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy] gi|324027246|gb|ADY14005.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp. Buddy] Length = 298 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 118/312 (37%), Gaps = 32/312 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + + I ++ G+ + G+ SL AIG+Y IL + L I++ Sbjct: 2 SSYQLGLIMNSCISIIGVTGVFAITSLAGMFSLGQAAYLAIGSYVTFILARMFNLPIFVT 61 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +S C ++ +P+LK R DY A+ T+ ++ ++ + TNG G + Sbjct: 62 SVAGIGLSALCAYVISVPTLKLRKDYFALITMGFGQMITATIVLLERYTNGSIGYSRIPK 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + +V+LG+ L + L+ + ++ Sbjct: 122 VNH------------------------LVWVILGITALVVFCVRNLKYSRFGRMCIALKT 157 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A S + KL + ++SA G+AG + I PD F ++ + + + Sbjct: 158 DEIAAKSFGIDVYRLKLRMYVLASAIAGIAGILYGLKNRVILPDSFGWNLSAEMQIFLFF 217 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG S++ A A+L + EL + F S T + + + L+I R Sbjct: 218 GGTNSITGAVFAGALLKLLPELFRTVTL--------FGQSLQEYRTIIYCVLILLIINFR 269 Query: 336 SHSLLRLRTPSN 347 + S Sbjct: 270 PSGVFGEYELSL 281 >gi|56695726|ref|YP_166077.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56677463|gb|AAV94129.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 614 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 125/333 (37%), Gaps = 34/333 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L+ L + + + +++ +FA L ++G G++S + +GA Sbjct: 312 MVLLALVAMLAFSPAVVSDFTTILLVDVMVATLFAVSLHFMMGVGGMVSFGHAAYFGVGA 371 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ + G + + + + + + G ++ G YLA+ T+ ++I + Sbjct: 372 YAAAMATKMLGWGMLPSMALGPVAAALAALFFGWFCVRLSGVYLAMLTMAAAQILWGVTF 431 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W+ +T G GI +P+++ + +Y+ L +C ++ Sbjct: 432 QWQDVTGGDDGILGV------------------WPAAWAKSDQVYFYLALVLCLGGIWLL 473 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + R +RD++ ++ F + F ++ G+AGA F S+ + P Sbjct: 474 RRVAHSPFGYTLRGVRDSRIRAEAIGIDTRFHQWMGFTLAGTLAGLAGAVFVFSKGSVFP 533 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 D +I + +V+LGG+ +L+ ++ + + + Sbjct: 534 DALSIGHSIDGLIMVLLGGIHALAGPVYGAMAMVLIEDWVSRL----------------D 577 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + V+L+ + L R Sbjct: 578 YWRFIFGGIILTVVLLAPDGIAGGVRRLIQLVR 610 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 97/307 (31%), Gaps = 29/307 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---WLL 95 + + + A GLSI+ G +++ Y +GAY L + I W Sbjct: 8 LLTGLANASSLFLIASGLSIIFGVTRIVNFAHGSFYMLGAYLAYTLVTTLQGGIPGYWFS 67 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +A++ G G+++ L L+ + L+ + I+ G + Sbjct: 68 VLAAAVLVGGIGLVVELTILRRIYRAPELFQLVATFGVVLIVQDLTLAIWGAEDLLGPRA 127 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + ++ + A+I L RT R Sbjct: 128 PGLDRA----------VRLMGEPIPEYDLALIAIGPAVLAAIWLVFHRTRWGVLVRAATQ 177 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + +AF + SA G+ GA S +V++ Sbjct: 178 DREMVGALGVNQAWLFSAAFVLGSALAGLGGALQIPR--EAVSLQMDLSIIGEAFVVVVI 235 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S++ A ++ + + F L + + V+++R Sbjct: 236 GGMGSVTGAFVAAVLISVLNAFAILI--------------FPQISIVLPFVVMAAVLIVR 281 Query: 336 SHSLLRL 342 + L Sbjct: 282 PYGLFGR 288 >gi|167570933|ref|ZP_02363807.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia oklahomensis C6786] Length = 538 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYAPGAFDWYPLAAIPASFLAAAAIGIV 323 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 324 LER--TVLKHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 381 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 382 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 441 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S I V+LGG+ ++ L V + Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 499 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 500 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 537 >gi|78065485|ref|YP_368254.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77966230|gb|ABB07610.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia sp. 383] Length = 539 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 77/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ + Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPGAFDWYPLVAVPVSFVTAALVGIV 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L + Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLASKA 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538 >gi|222149558|ref|YP_002550515.1| ABC transporter membrane spanning protein (urea/amide) [Agrobacterium vitis S4] gi|221736540|gb|ACM37503.1| ABC transporter membrane spanning protein (urea/amide) [Agrobacterium vitis S4] Length = 386 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 99/346 (28%), Gaps = 33/346 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L A Y+ ++ + L Y M A L +V G G+LSL +A+G Y+ + Sbjct: 33 LATSPDSALHMPTYLVALFGKYLTYAMLALALDLVWGFCGILSLGHGAFFALGGYAMGMY 92 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 R LP D A L++ + + Sbjct: 93 LMRQIGPRGTYGDPVLPDFMVFLNWKELPWFWHGFDMFWFAALMVLVAPGLLAFVFGWFA 152 Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + D + + F ++ Sbjct: 153 FRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFNIQADGTRAALFS 212 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + S ++ + R+ IRD + L + KL AF VS+ G+A Sbjct: 213 LSALFLAGSLLLVSAIVRSKYGKVLVGIRDAESRTRFLGYRVENMKLFAFVVSAMMAGVA 272 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA + I+P F + +I V+ +GG +L ++ G + G+ Sbjct: 273 GALYVPQVGIINPGEFSPANSIEVVIWTAVGGRATLIGPIIGAVLVNGGKTIFTGL---- 328 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 F + V L ++ T S R Sbjct: 329 ----------FPNAWLFALGGLFVAVTLFLPKGIVGTVTQSLLRRR 364 >gi|107023435|ref|YP_621762.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|116690517|ref|YP_836140.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|170733858|ref|YP_001765805.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|254247441|ref|ZP_04940762.1| ABC transporter permease protein [Burkholderia cenocepacia PC184] gi|105893624|gb|ABF76789.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia cenocepacia AU 1054] gi|116648606|gb|ABK09247.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia cenocepacia HI2424] gi|124872217|gb|EAY63933.1| ABC transporter permease protein [Burkholderia cenocepacia PC184] gi|169817100|gb|ACA91683.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 316 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + + L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|328544749|ref|YP_004304858.1| ABC branched-chain amino acid transporter, permease protein [polymorphum gilvum SL003B-26A1] gi|326414491|gb|ADZ71554.1| ABC-type branched-chain amino acid transport system, permease component protein [Polymorphum gilvum SL003B-26A1] Length = 317 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 106/305 (34%), Gaps = 26/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + + I +FA ++ G G++SL + + IGAY+ L + L + Sbjct: 26 PFYLGLISSLFILAIFALSYDLLQGYAGVVSLGHAVYFGIGAYTSATLSNHGVNEPVLGL 85 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++SGA I+ + + TL + +F K +T G G Sbjct: 86 VAALVVSGAVAGILARIVVVGTDLTRLLVTLGIGFLFHEAANKAHWLTGGADGKS----- 140 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + F ++ L + L ++L + + A R IR+N Sbjct: 141 -------DFTVGPVLGLFQFDFLGRTAFFYTLAVLVLVYLLLLRITSSPFGLALRGIREN 193 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ ++ + +S A G+AGA + S DM F + V+ + LG Sbjct: 194 AGRMPAIGASVSRHLAVTYVMSGAIAGVAGALLTQTSQFASLDMLGFERSAEVVIMTALG 253 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G S+ + + + ++ Y++ + + L + + + Sbjct: 254 GTGSIPGVVLGATAFGYLKDALSALSPKYWHLG--------------IGVVLMVSVFVLP 299 Query: 337 HSLLR 341 + Sbjct: 300 DGIAG 304 >gi|307299182|ref|ZP_07578983.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2] gi|306914978|gb|EFN45364.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2] Length = 348 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +++ K++ + + +L L+L +I + IYV+ L+++ G G S Sbjct: 1 MDRKLKLVITIIELLVFILLLWLAENYIDAFIKRILNVAAIYVILGVSLNLINGFTGQFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L A+GAY+ +L L + I I A Sbjct: 61 LGHAGFMALGAYASALLYMSPSLK--AMNFFIQPIIWPLSEIEIPFFFALLIGGTVAAIA 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + + + G R+ + + Y Sbjct: 119 GFAVGAPCLRVGGDYLAIVTYGFAEIIRVILNNLQSITN----GPLGLKGLPTYTNLYWS 174 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G + I L ++ A ++IR+++ A ++ + K AF + + F G+ G Sbjct: 175 WGWALFTVFFIKKLVDSSYGRALKSIREDEVAAEAMGVNLFKHKTLAFVIGAFFAGIGGG 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + I P+ F + ++ IV+LGG+ S++ + ++EL + Sbjct: 235 LLGSLLMTIDPNSFNIALTFQIVMIVLLGGLGSITGSVVMGISVAFLMELLRFVESPMTI 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + L + ++ L + S Sbjct: 295 FGFTIP-GIPGMRMLIFALILVITVIFFRRGLFGHKEFS 332 >gi|221201127|ref|ZP_03574167.1| urea ABC transporter, permease protein UrtC [Burkholderia multivorans CGD2M] gi|221206420|ref|ZP_03579433.1| urea ABC transporter, permease protein UrtC [Burkholderia multivorans CGD2] gi|221213756|ref|ZP_03586730.1| urea ABC transporter, permease protein UrtC [Burkholderia multivorans CGD1] gi|221166545|gb|EED99017.1| urea ABC transporter, permease protein UrtC [Burkholderia multivorans CGD1] gi|221173729|gb|EEE06163.1| urea ABC transporter, permease protein UrtC [Burkholderia multivorans CGD2] gi|221178977|gb|EEE11384.1| urea ABC transporter, permease protein UrtC [Burkholderia multivorans CGD2M] Length = 395 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 99/350 (28%), Gaps = 32/350 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 52 LAVGIGVPLAALVAPESSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + +++ L Sbjct: 112 FALGGYAIGMYLMREIGRDGQYGSDLPDFMVFLDWHQLPWYWAGTQHLAWALLLVVLVPA 171 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + A + +I Y + + R FP + Sbjct: 172 VLAWVFGFFAFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPIT 231 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 232 SPGTRTVLLLLTFATLVLAFVAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + ++P +I + V +GG +L + G Sbjct: 292 TVSAVLCGIAGALYVPQVGIVNPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + F + + LV L+ ++ + Sbjct: 352 SVFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGVVER 387 >gi|307324511|ref|ZP_07603718.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113] gi|306889755|gb|EFN20734.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113] Length = 647 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 101/310 (32%), Gaps = 27/310 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 V+ + L G + + ++G+Q + + A+G++ V+ S G + L+ A+ Sbjct: 28 ALVLLVAAMSLLSGDFLTTGNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 86 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 A + GL +W+ ++ ACG++ G + ATL M I + + Sbjct: 87 ATVLAWSATSQGLPVWIAALLAVATGVACGLVSGALVSFGKLPPFI-ATLAMLSIGRGLA 145 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + + ++ +L M + Sbjct: 146 L--------------------VISQGSPIAIPDSMSGLGDTIGGWLPIPVLVMIGMGLIT 185 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L RT A I N++A + KL +A+S F +AG A+ Sbjct: 186 AGVLGRTYAGRAMYAIGGNEEAARLSGIRVTRQKLVIYALSGGFAAVAGIVLASRLSSAQ 245 Query: 258 PDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 P E + ++VI GG+ S IL + + F + Sbjct: 246 PQAAVGYELDAIAAVVIGGASLSGGVGKASGTLIGALILAVLRNGLNLLEVSPFWQQVVI 305 Query: 313 DCSFNMRHTT 322 + Sbjct: 306 GVVIALAVLL 315 >gi|163855102|ref|YP_001629400.1| ABC transporter permease protein [Bordetella petrii DSM 12804] gi|163258830|emb|CAP41129.1| ABC transporter permease protein [Bordetella petrii] Length = 294 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 129/308 (41%), Gaps = 21/308 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ ++ + + M A L+ ++G G+ SL + + +GAY + + S+ L + Sbjct: 3 AYLQNIAVLFCVNAMLAVTLNFIMGYAGIFSLAHAVFFGVGAYVAANIAMHFSDSLLLCV 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++GA M++ LP+L+ RG+Y A+L + I + +WK +T G G+ Sbjct: 63 AAAVLVAGALSMVLALPALRVRGEYFVAASLGLQVIGVTVFSEWKGVTGGLGGLVGIPPP 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + + F + + + + LL R + + IRD+ Sbjct: 123 TVFGHALATPGEFLALAVAGLAAVLLITTALL--------------RGSFGRSLMAIRDS 168 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + K + AVS+ G+AGA +A ++ + F +I+++++VI+G Sbjct: 169 ESAAQAAGKWVAAIKTLSVAVSAGLAGVAGAIYAFYMSFVNVEGFMLETSILLMAMVIIG 228 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G ++ A+L+ + + + + L+++ R Sbjct: 229 GTGTVFGPIIGAALLMLLPAALTYL-------PFLPPSELGTVQQIVYGAIMVLLMMYRP 281 Query: 337 HSLLRLRT 344 L+ R Sbjct: 282 GGLVGGRR 289 >gi|222106248|ref|YP_002547039.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] gi|221737427|gb|ACM38323.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] Length = 351 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 74/330 (22%), Positives = 135/330 (40%), Gaps = 16/330 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ LL + L + D + + L + GL+++ G G +SL Sbjct: 21 ISVATLLVLLLAYGILPVIGTSYLFDGILLPFLALSLAGVGLNLLTGYAGQVSLGSAAFM 80 Query: 75 AIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 A+GA++ L + + I ++ + + A G++ GLPSL+ RG YLA++TL Sbjct: 81 AVGAFACFNFDLRAGSLPLIVSILLAGLSAAAIGIVFGLPSLRLRGFYLAVSTLAAQFFV 140 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 Q L K+ +N A + + YY L + L Sbjct: 141 QWALTKFSWFSNDSASGVIDAPPLT-------------LAGFTFEGPVGRYYFALIIVTL 187 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-AS 252 + L + + +RDN+ A + ++ KL AFAVSS IG+AG +A A Sbjct: 188 VTFLAHRLVISQTGRNFIAVRDNETAARIIGVPVLRTKLLAFAVSSFIIGIAGVLWAFAY 247 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + P F + V+ I+I+GG+ SL A+++ + + + F L Sbjct: 248 LRTVEPAGFNLDRSFQVLFIIIIGGLASLRGAFFGAALIVVFPVVLSRVGAFVFGDLFDS 307 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +M ++ + L +++ L L Sbjct: 308 GV-LDMTQRIVLGALIILFLILEPDGLAAL 336 >gi|163757947|ref|ZP_02165036.1| putative permease component of ABC transporter [Hoeflea phototrophica DFL-43] gi|162285449|gb|EDQ35731.1| putative permease component of ABC transporter [Hoeflea phototrophica DFL-43] Length = 363 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 119/326 (36%), Gaps = 19/326 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L++ + + + IL ++ A +++ G GL+S+ IGA Sbjct: 24 VVAVLLIVLAIALPAFASRSLIQDMFFILTMLVLAQFWNLLAGYGGLVSVGQQAFVGIGA 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ + G I ++ + + + + + +G Y AI T +++E+ + ++ Sbjct: 84 YAMFSVVILMGFDPVPSILIAGVAALLLAIPTAFFAFRLQGAYFAIGTWVIAEVVRLLVA 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +WK + G R I S +I Y++ + + + + I Sbjct: 144 QWKAVGGGTG--TSLPRTATREMWFTETIETLFGVRSAAARDILAYWLAVVLAVATIAGI 201 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 WL RT +RDN +A S+ + K + F VS+ G+AG + RISP Sbjct: 202 YWLLRTKRGLGLAAVRDNIEAAKSVGVDAVRMKWTVFLVSAFGTGIAGGLIYMQKARISP 261 Query: 259 DMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 D VI IV++GGM ++ + + L Sbjct: 262 DAAFSLQDWTAYVIFIVVIGGMGTIEGPILGVLVFFILQSLLADY--------------- 306 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 + + + ++L L L Sbjct: 307 GSWYLMALGVIGITIMLFAPRGLWGL 332 >gi|163734445|ref|ZP_02141885.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] gi|161392453|gb|EDQ16782.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] Length = 327 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 114/324 (35%), Gaps = 15/324 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L + + ++ + +I+ + A GL+I +G GL+SL + + +G Sbjct: 10 VVLIGLCAVPIWALLVDEPFTITLATRAVIFALAAVGLNIALGWGGLVSLGHAVFFGLGG 69 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL ++ + ++ L ++ G + L+ I Sbjct: 70 YAMGILAHHAQTFTPVMEWPFLIEGTKSMPVIWLVAMISAGVAALVIGLLSLRTAGVYFI 129 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + G S+ FP + I + + + + I Sbjct: 130 MITLAFGQMFYYFAISWAEYGGEDGLSIYVRNDFPGLNTLVPIHFFALCFVILCIVLFIN 189 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ A R ++ + KL AF +S G+AGA FA +SP Sbjct: 190 ARLIKSPFGLALNAARQVPTRVETVGMDPVRLKLVAFVISGVITGLAGALFADLNRFVSP 249 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 MF + + ++ VILGG+ L + + + + G++ Y+ Sbjct: 250 TMFSWQMSGEIMIFVILGGVARLFGPVVGAVLFVMLEHILGGLSNYWH------------ 297 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + L +++L ++ L Sbjct: 298 ---IYLGALLLVIVLFARGGIIGL 318 >gi|149926555|ref|ZP_01914816.1| ABC-type transporter, permease component [Limnobacter sp. MED105] gi|149824918|gb|EDM84132.1| ABC-type transporter, permease component [Limnobacter sp. MED105] Length = 328 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 125/302 (41%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + +++L + +FA ++++G GLLS Y + GL L + Sbjct: 27 LLMKLLCFALFACAFNLLIGYTGLLSFGHAAFLGGAGYIAGYVIRDLGLPFELGLLAGVA 86 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G++MG +++ +G Y + TL ++++ I ++ T G+ G+ R Sbjct: 87 FAAFLGLVMGALAIRRQGIYFTMITLALAQMLYFIFLQAP-FTGGEDGLQGIPRGT---- 141 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + ++ +Y+V+L +C ++I+ + + I++N+ Sbjct: 142 ---------LLGVVDLSDDLTLYFVVLAICIAGYALIVRTVHSPFGQVLKAIKENEPRAI 192 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL F +S+A G+AGA A+ + ++ + +V+ + ++GG+ +L Sbjct: 193 SLGYDVDKYKLLVFVLSAALSGLAGATKASVLGFETLTDVHWTMSGLVVLMTLVGGLGTL 252 Query: 282 SKIAKATAILIGVVELCCGMNFYY-FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + ++I + + + + + S + T + +V+L ++ Sbjct: 253 AGPIVGAIVIIALENRIGEFGTWMAVTTDIAWFRSLGEQVTIVTGFIFIVVVLAFRRGIV 312 Query: 341 RL 342 Sbjct: 313 GE 314 >gi|167771044|ref|ZP_02443097.1| hypothetical protein ANACOL_02398 [Anaerotruncus colihominis DSM 17241] gi|167666714|gb|EDS10844.1| hypothetical protein ANACOL_02398 [Anaerotruncus colihominis DSM 17241] Length = 301 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 116/311 (37%), Gaps = 32/311 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + IQ I ++ G+ + G G+ SL AIGAY IL ++ GLS W+ Sbjct: 2 NSYYVGLLIQASISIIAITGIFALTGLAGMFSLGQAAYMAIGAYITFILAAKTGLSFWIT 61 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +P+++ R DY ++ ++ + + +LI + ITNG G + Sbjct: 62 SLGGIGACMLVAWLAAMPTVRLRKDYFSLISVGLGQTITALLITFSDITNGSQGFSKIPK 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + L + LS + L+ + +++ Sbjct: 122 VEH------------------------LLPLALLVTALSIFCVRNLKYSRYGRMSIALKN 157 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A S + K+ + + S G+AG + + P+ F ++ + + Sbjct: 158 DELAAKSFGIDVYKLKIKVYILGSVIAGLAGILYGLQNRVLLPESFGWTASSEQEIFLFF 217 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG SL+ + A+L + E + F S T L I + L+I R Sbjct: 218 GGTNSLTGAVISAALLKCLPEFFRNVTL--------FGQSLQEYRTILYCILILLIINFR 269 Query: 336 SHSLLRLRTPS 346 L+ S Sbjct: 270 PSGLMGEHELS 280 >gi|160901456|ref|YP_001567038.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160367040|gb|ABX38653.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 333 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 124/320 (38%), Gaps = 24/320 (7%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 LL + A S+ ++LI+ + A G ++++G GLLS I + +G+Y+ Sbjct: 10 LLLALAIVVAMPLCMQSGSLASEVLIFGLAAMGCNLLLGYTGLLSFGQGIFFGLGSYTIA 69 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L +R+ L + L + + + I+G +++ RG Y + TL +++F + Sbjct: 70 LLLTRWPLPMPLALLAATAMGAVGAAIVGWVAIRQRGTYFVMLTLAFAQMFYFLAYSATD 129 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 IT G G+ R + + Y + + + ++ + Sbjct: 130 ITGGDNGLLDVPRPA---------LAVAGQTLWPLATPWQYYGFVAVLFLVVFWLLRRVC 180 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + +RDN++ ++ + KL AF +S A G+AGA A + Sbjct: 181 DSMFGRTLLAVRDNEERAAAVGYDLRLLKLQAFVISGAVTGLAGALHAMMTGIAPLSNAE 240 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + +++ + ++GG +L A + + + + + Sbjct: 241 YHTSEMILVMTVIGGTGNLLASVLGAAFYVLLGDWLSTLWPRW---------------LL 285 Query: 323 LMVIALFLVILMRSHSLLRL 342 L+ + L +V L L L Sbjct: 286 LLGVVLMIVSLGLQRGLWGL 305 >gi|153004042|ref|YP_001378367.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] gi|152027615|gb|ABS25383.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] Length = 328 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 117/307 (38%), Gaps = 25/307 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + +ILI FA G +++ G GLLS + GAY+ ++ S+WL Sbjct: 29 PSYPLVVLTEILILGTFALGFNVLFGYAGLLSFGQAAFFGTGAYAAGLVLLHGPRSLWLA 88 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + + + +G +++ + +I TL + + + W+ +T G G Sbjct: 89 LLAAVAAAALLALPLGALAVRRDEIFFSILTLGLGMMIHSAAFGWREVTGGSDG------ 142 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 T + ++ MY + L L ++ + R+ + R+ Sbjct: 143 ----LTGFTVPKLDLLVTAVPLVRPRNMYLLALAATALVTLVLRLVVRSPFGLLLQASRE 198 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N++ + +L+AF +S+A G+AGA FA +PDM +S + + + IL Sbjct: 199 NRQRLAFAGGNVPRLRLAAFVLSAAVCGLAGALFALFNRIAAPDMLHWSFSARPVLMTIL 258 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG + A G+ +L + ++ L ++++ Sbjct: 259 GGAGTFLGPIVGAAAFFGLEQLVTR---------------WTQDWMIVLGALLVPIVILF 303 Query: 336 SHSLLRL 342 L+ Sbjct: 304 PRGLVGT 310 >gi|121592898|ref|YP_984794.1| inner-membrane translocator [Acidovorax sp. JS42] gi|120604978|gb|ABM40718.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax sp. JS42] Length = 358 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 78/345 (22%), Positives = 139/345 (40%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF + ++ + ++ + F+ + A S + ++ I ++I M A G++I+VG Sbjct: 18 QIFPITQDR------IAILLLLAVAFVAVPAMASDYFYRAILIPLVIMSMAALGVNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY R+ + + + + + G++ GLPSL+ +G Sbjct: 72 YCGQISLGSGAFMAVGAYGAFNFFVRFPGMPLVAALILGGLCATFFGILFGLPSLRVKGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL + ++ K TN V+ + Sbjct: 132 YLAVATLAAQFFSDWMFLRIKWFTNNSDSGSVSVSNLQVFGMPLDSAMAK---------- 181 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Y L + + A + L R AI W IRD A + ++AKLSAFAVSS Sbjct: 182 ---YLFCLTLLVVVALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +GMAGA +A P F + ++ +VI+GGM S+ A ++ + Sbjct: 239 IVGMAGALWAFVHLGSWEPAAFSVEVSFRLLFMVIIGGMGSIMGAFFGAAFIVVLPIFLN 298 Query: 300 GMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + +++ H L +L Sbjct: 299 QFLPAVAGLFGVDISTAAVSHAELMIFGALIVWFLIVEPHGLAKL 343 >gi|51246340|ref|YP_066224.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50877377|emb|CAG37217.1| probable high-affinity branched-chain amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 320 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 64/322 (19%), Positives = 135/322 (41%), Gaps = 31/322 (9%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L + ++ +++ + A + I++G G+ ++ + + +GAY Sbjct: 12 LFFLLMLSLPALLDSRWLAVATTFVVFSIVALSMDIILGKAGMFNMGQALFFGMGAYISA 71 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WK 141 IL + +G + +P + +I G+I+ P + RGDYL +A++ + +F ++ Sbjct: 72 ILNAHFGWPMLATVPAAIIIPAIFGVILAGPIVHLRGDYLLVASIGFNIVFIQVVQNDLG 131 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G GI+ D + G + +Y L FL+ ++ L Sbjct: 132 GVTGGPNGIFGLDMINLPGFMDSPQ--------------LGAFYAALIALFLTFLLMYNL 177 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 ++ A +R+++ A + K+ AFAV + GMAG F+A +SP+ F Sbjct: 178 AKSKAGRALHYLREDELAASCVGINTRVYKIFAFAVGAGIAGMAGTFYANQYSAVSPEAF 237 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F ++++ SIVI+GG S+ I ++ + E+ F Sbjct: 238 NFLQSVLFFSIVIVGGS-SIPGILLGVFVMFVLPEIFR---------------DFATWRY 281 Query: 322 TLMVIALFLVILMRSHSLLRLR 343 + +A+ + +++R + + Sbjct: 282 FIFGLAMIVTMIIRPRGICPAK 303 >gi|289626464|ref|ZP_06459418.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647184|ref|ZP_06478527.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868315|gb|EGH03024.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 355 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 16/328 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + F+ + + + ++ I L+ + GL+++ G G LSL A+ Sbjct: 27 IGLCSLLVFAFIAVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ + G+ + L + ++S ++ GLPSL+ +G YL ++TL + + Sbjct: 87 GAFAAYNLQLRVPGMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L ++ TN A + Y + LG+ L Sbjct: 147 VLTRFSWFTNDNASGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLF 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + L R + W +RD A + + AKL AFA+S ++G+AG+ +A A Sbjct: 194 WLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F + + ++ I+I+GG+ S+ A ++ L ++ L+ Sbjct: 254 TVEPHGFDLNRSFQILFIIIIGGLGSVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQ 313 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 N++ L + ++ L RL Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARL 340 >gi|220921540|ref|YP_002496841.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219946146|gb|ACL56538.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 294 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 18/292 (6%) Query: 50 VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109 ++ + GL++ G GL++ V +AIGAY+ +L + L +A+++G Sbjct: 16 MLLSLGLTLQYGLTGLINFGHVGFFAIGAYASALLALKGVPVP-LGFAAAALLAGLAAWP 74 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 +GL +L+ R DY AI TL SE+ + ++ + +TNG G+ RLY Sbjct: 75 LGLVALRLRDDYFAIVTLGFSEVVRIVVTSERWLTNGVQGLPGIPRLYPG---------- 124 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + + +L + + +I + + IRD ++A +L Sbjct: 125 ----LTGPAAQGATLATVLAVTLAAVWMIRRIAASPFGRLIEAIRDAEEAVTALGKDPAR 180 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 K+ V + G+AGAF+A I P+ F V +I+GG+ +S TA Sbjct: 181 LKVQVLVVGAGLAGIAGAFYAHYITYIVPEQFVPLVTFYVWMAMIMGGVGRVSGAVVGTA 240 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 IL+ +E + + ++ + L L ++ R L+ Sbjct: 241 ILMAFLEGSRFLRDLVPGIS---EVDMASVRIGVVGLLLILFVMFRPQGLMG 289 >gi|186477004|ref|YP_001858474.1| urea ABC transporter permease UrtC [Burkholderia phymatum STM815] gi|184193463|gb|ACC71428.1| urea ABC transporter, permease protein UrtC [Burkholderia phymatum STM815] Length = 398 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 107/349 (30%), Gaps = 32/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + L V + L+ A Y ++ +++ Y + A L +V G G+LSL Sbjct: 53 LIVAVGLGVPFTALVLPQTSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHG 112 Query: 72 IAYAIGAYSYVILGSRYGLS----------IWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + +A+G Y+ + R + + + G +L Sbjct: 113 LFFALGGYAIGMYLMRAIGHDGKYGSDLPDFMVFLDWHRLPWYWEGTQHLAYALLLVVLV 172 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFP 173 A + +K ++ + A L F R FP Sbjct: 173 PAAIAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFP 232 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + ++ + G+ L+ + + + +RD + L + KL Sbjct: 233 ITHPGTRTTLFLMTFGVLVLAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYNPLAYKLF 292 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 293 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIIGAFAVNG 352 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ + ++ L Sbjct: 353 AKSFFTAY--------------FAEYWLFFLGLIFVLVPLLLPNGIMGL 387 >gi|330971012|gb|EGH71078.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. aceris str. M302273PT] Length = 226 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 23/234 (9%) Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSF 176 TL EI + L IT G GI ++ F G T ++ FF P + Sbjct: 3 VTLGFGEIIRIFLRNLTDITGGPNGISNIEKPTFFGLTFERKAAEGMQTFHEFFGLPYNS 62 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 + IF+Y + L + + +I L R I AW +R+++ A +L KLSAF Sbjct: 63 INKVIFLYLIALLLALAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFT 122 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 + +AF G AG+FFAA + I+P+ F F E+ I+++IV+LGGM S + A ++I + E Sbjct: 123 LGAAFAGFAGSFFAARQGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPE 182 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L + Y + + L+++ R L ++ P L+ Sbjct: 183 LMREFSDY---------------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 221 >gi|319408544|emb|CBI82197.1| permease protein of ABC transporter [Bartonella schoenbuchensis R1] Length = 352 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 66/339 (19%), Positives = 117/339 (34%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K + + L+ FLF T Y + I I + A L+++ G G+ S Sbjct: 1 MAKSTTLFLSFISIVALIGFLFYADTHFNNYTLRIINLIAINAILAISLNLIYGFTGMFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY IL ++ + I+ + + L A + Sbjct: 61 LGHAGFMAIGAYICAILLLSPEQK--EMMWILEPIAEPLQNLQLPFFIAVIISGLCAAAI 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + + + G R+ T + + Y L Sbjct: 119 GLLVALPILRLGGDYLGIATLGFAEIIRVIITNATSLTNGSLGIKGIPQNATLWWNYGWL 178 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + I N R IRD++ A ++ F + +F V + F G+ GA Sbjct: 179 AFTIIFITLLLQ----SNIGNVLRAIRDDEIASKTMGVNTFFYRSLSFTVGAFFAGIGGA 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I P MF F ++ IV+ GG+ S++ + I+ ++E + Sbjct: 235 LTAALISTIDPKMFNFLLTFNILMIVVAGGLGSITGSIVGSIIITVMLESLRIIESPLNL 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 S + + + L ++IL LL R S Sbjct: 295 SFIYIP-GIPGLRMVVFSLLLLIIILFWRKGLLGQREFS 332 >gi|330837521|ref|YP_004412162.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374] gi|329749424|gb|AEC02780.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374] Length = 293 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 122/308 (39%), Gaps = 40/308 (12%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S+ LI ++ G+ I+ G GL SL AIGAY+ +L ++GL L + Sbjct: 4 LISILTSTLITLIAVIGIYILTGMTGLFSLGQASFMAIGAYTSGLLVVKWGLPFPLACLI 63 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G I+GLP+++ R DY+++ TL E IL + P+T G AG Sbjct: 64 AIFLAVLVGWIVGLPTVRLRRDYISLVTLGFGEAITAILNRATPLTGGAAGFVGIPPYTS 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++L + + + + + +R ++ Sbjct: 124 FT-------------------------LVLVSAVIIIAAVAMFKVSKFGRQCSALRGDEL 158 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A ++ + + K++AF S A +G +A + P +F + ++ + +V GG Sbjct: 159 AARAVGINVPWIKMTAFLFSVAVTAYSGCLYAFYTTYVDPSIFGWRKSADWVIMVFFGGS 218 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL+ AT IL G+ E+ + Y + + L+I + Sbjct: 219 GSLTGAVLATFILSGLPEILRFLADY---------------RSIFYAALVLLIINFKPSG 263 Query: 339 LLRLRTPS 346 LL + Sbjct: 264 LLGSWELT 271 >gi|33600472|ref|NP_888032.1| branched chain amino acid ABC transporter [Bordetella bronchiseptica RB50] gi|33568071|emb|CAE31984.1| Putative branched-chain amino acid transporter membrane protein [Bordetella bronchiseptica RB50] Length = 337 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 125/323 (38%), Gaps = 29/323 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 P+L+ L ++++ + +FA ++++VG GLLSL + + + AY Sbjct: 11 PMLVLLACAMVAPAIVYPIFLMKVMCFAIFACAVNLLVGYAGLLSLGHSMFFGMSAYITA 70 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +G +P + + A G+I G +++ +G Y A+ TL ++++ ++ Sbjct: 71 HTLKVWGWPFEAALPAAVLACSALGLIAGAIAIRRQGIYFAMITLALAQMVYFFCLQAP- 129 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 T G+ G+ R LG + +Y V+L + + ++ Sbjct: 130 FTGGEDGLQNVPRPVVLGLFDTADDW-------------TLYVVVLAIFLAAVAVYHRAI 176 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + IRDN+ SL + KL AF +S+A G+AG A S Sbjct: 177 HSPFGEVAKAIRDNEPRAISLGYKVNRYKLLAFVISAALTGLAGGTKALVFQLASLTDVG 236 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + V+ +V++GGM ++ +++ + + + Sbjct: 237 WHISTEVVLMVLVGGMGTIIGPLVGAVLILAMQYYLAPLGEWV---------------MV 281 Query: 323 LMVIALFLVILMRSHSLLRLRTP 345 + L V+++ L+ Sbjct: 282 IQGAVLVTVVMIFRRGLVGEFEA 304 >gi|121607327|ref|YP_995134.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121551967|gb|ABM56116.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 359 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 127/335 (37%), Gaps = 11/335 (3%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + ++ LL S+ ++L++V+ +++G G++S + + Sbjct: 16 LAVILIAVLLGLALAPFLLPGVKALSVAAKVLVFVVLVASFDLLLGYTGIVSFAHTMFFG 75 Query: 76 IGAYSYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 IGAY + +R G + L + + ++S + MGL SL+ R + A+ TL ++ Sbjct: 76 IGAYGIAVASTRLGPTWPALALGLGGALLLSLLLSLAMGLFSLRVRAIFFAMITLAVASA 135 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 FQ + + IT G+ G+ + FP + + YY+L Sbjct: 136 FQTLASQLPDITGGEDGLTFNLPAL---LSPDFEFFGQPFPGVALDGRLLCYYLLFASAL 192 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +L + + + IR+N+ ++ ++ + + +S+ F MAGA A Sbjct: 193 VLVLALLRIVNSPFGRVLQAIRENEFRAEAIGYRVVLYRTLSSVLSALFATMAGAMLALW 252 Query: 253 RDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFN 307 PD F I + IV++GGM ++ + + + + +L + Sbjct: 253 LRYNGPDVSLSFEIMIDCLLIVVIGGMGTIYGPVIGSVLFLAAQSYLQDLLRLGSEAASR 312 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 R + + + + ++ Sbjct: 313 LPWLSALLSPDRWLLWLGLLFVVSVYYFPSGVVGR 347 >gi|222102153|ref|YP_002546743.1| ABC transporter ATP-binding/permease protein [Agrobacterium radiobacter K84] gi|221728270|gb|ACM31279.1| ABC transporter ATP-binding/permease protein [Agrobacterium radiobacter K84] Length = 574 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 102/326 (31%), Gaps = 38/326 (11%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L + L + L Y + A GL + G G LSL + AI AY Sbjct: 9 LAVLATAMILLPLLAGDLWAYEVSLYLTYGIVATGLGLAWGLSGTLSLGHGLYMAISAYL 68 Query: 81 YV-----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + GS L + M+ ++ TL ++ Sbjct: 69 AANVFIVLDGSGLAWPAAFLCALIPMVIAFIIAFGVFKGQTGNATSFSMVTLALALAGGQ 128 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I I W +T G G+ L + I Y ++ + Sbjct: 129 IAIGWSSVTGGFNGLLGVPPLP------------------GISGIIEQYALVGAATLVVC 170 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + +WL + W+ + +++ L K AFAVS G+ G +A + Sbjct: 171 AGYVWLISAPLGTVWKAVAADERRMQFLGFDTALLKALAFAVSGFCAGLGGVIYAQQQGI 230 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++PD+ F+ ++ V +GG S+ ++ + ++ Sbjct: 231 VTPDLSGFAFCGSLLVYVAVGGRMSVFGPLVGALVVGLLSSELRDRVDWWE--------- 281 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + +V+L L Sbjct: 282 ------LVLALVFIVVVLRFPKGLAG 301 >gi|254469518|ref|ZP_05082923.1| inner-membrane translocator [Pseudovibrio sp. JE062] gi|211961353|gb|EEA96548.1| inner-membrane translocator [Pseudovibrio sp. JE062] Length = 341 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 108/328 (32%), Gaps = 15/328 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + +AV+ LL ++ + Y ++ I I+ + GL+ +G G++S + Sbjct: 21 IVNIAVMAILLALPLWASSIGEDYYVNLASLITIFAIAGVGLNFAIGQGGMVSFGHAAFF 80 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y+ I + A+ +I+ + ++ G I Sbjct: 81 GIGGYTTGIAAFHSFEETLFMAMPFAISGTNQMLIIWIVAMVLCGLAALAIGAISLRTEG 140 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + G S+ P + + + + + Sbjct: 141 VYFIMITLAFAQMIYYFAISWPTYGGEDGLSIYLRNELPMVDAESALTFFLICFILLLGA 200 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A T R N+ + KL+ F +S+ G+AGA FA Sbjct: 201 IFVSARLSGSRFGAALGTARMNETRLATSGIDPFPIKLTGFVISAMITGLAGALFAELNG 260 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P M + + ++ VILGG+ L A+ + + ++ Sbjct: 261 FVGPSMLSWHRSGEIMVFVILGGVGRLYGPVIGAALFVLLETYIGEWTEHW--------- 311 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 L+ AL V+L ++ L Sbjct: 312 ------QLLLGFALLGVVLFARGGVMGL 333 >gi|206561047|ref|YP_002231812.1| putative amino-acid transport permease [Burkholderia cenocepacia J2315] gi|198037089|emb|CAR53010.1| putative amino-acid transport permease protein [Burkholderia cenocepacia J2315] Length = 316 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|85706504|ref|ZP_01037597.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] gi|85668916|gb|EAQ23784.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] Length = 551 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 120/338 (35%), Gaps = 31/338 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +++ L ++ L F + + + G ++ ++++G+ + S Sbjct: 100 IDRRPIYWALCLLIIALGPLFFPADMMN--TLMTAGAIFGVFAAINVCWTLIIGTASIFS 157 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L + + +YG+ + L + + + G + +P+L+ G Y A+ TL Sbjct: 158 LATYAVVGTAGFISSWVSIKYGIPWYFLPFIGSGVGLIFGAAIAIPALRLDGFYYALLTL 217 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++E+ + + G + F + + YY Sbjct: 218 GLNELCRVFFTTSNEFGSASGG-------------LYGASTFVNDTWEPITQSMVTYYSS 264 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN-TTIIFAKLSAFAVSSAFIGMAG 246 + + + + + R + ++AF + A+++ F V+S +G G Sbjct: 265 FALLIGALFLFRLIHGKRLGRILRMAPEKREAFAAACGVDYKRARITIFVVTSIALGFIG 324 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 F++A I+ +F F ++ ++++ +GG+ T +++ + ++ + Sbjct: 325 GFYSAQYRGIAFSIFGFDTVLLGLAMLAIGGIGKAEGAILGTLVVVFLDKVLLELGP--- 381 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ + V+L ++ ++ Sbjct: 382 ------------IRHFMIGALMLGVVLFLNNGYFGIKQ 407 >gi|160900253|ref|YP_001565835.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160365837|gb|ABX37450.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 400 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 71/326 (21%), Positives = 129/326 (39%), Gaps = 30/326 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ L L ++ Y +L Y + GL+I+ G G +SL +AIGA Sbjct: 85 VLIAALALAACSLVFVAKGYQLFQATMVLAYAVALVGLNILTGYSGQISLGHGAFFAIGA 144 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL- 137 Y+ IL R GL+ WL +P + ++S A G + G P+L+ G YLA+AT + +L Sbjct: 145 YAAGILMDRAGLAYWLAVPAAGLVSLAAGYLFGRPALRLEGLYLALATFALGVAMPQLLK 204 Query: 138 -IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + T G GI + G + + F+ + + Sbjct: 205 YRHLEAWTGGVGGIVLTKPEAPWGLPLDADQWFYLYALAVAALL--------------FW 250 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L + A R IRD+ A ++ K AFA+S+ + G+ GA A + + Sbjct: 251 MARNLIDSGSGLALRAIRDHAMAAEAMGVDNAHCKSMAFAISAGYTGVGGALSAIAVQFV 310 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +PD F +I ++ V++GG+ +L ++ + L ++ Sbjct: 311 APDSFTMFLSISLLVGVVVGGVGTLWGALFGALFIMFIPGLAEQVSKA------------ 358 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 + L + + ++ L Sbjct: 359 --APWAVYGTVLIVFMFAMPGGVMGL 382 >gi|76802352|ref|YP_327360.1| branched-chain/neutral amino acids ABC transporter permease [Natronomonas pharaonis DSM 2160] gi|76558217|emb|CAI49805.1| ABC-type transport system permease protein II (probable substrates branched-chain/neutral amino acids) 4 [Natronomonas pharaonis DSM 2160] Length = 334 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 131/325 (40%), Gaps = 22/325 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + L + L L + + + I ++ + + A G ++++G GLLS + Sbjct: 16 VLGGIGLFVLLALIPATGRGFESFLVIWMMCFAIAALGFNVLLGYTGLLSFGHAAFFGSA 75 Query: 78 AYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY+ I R S+ +L+ + ++G G+ M L +L+ Y A+ TL ++++ + Sbjct: 76 AYAMAIGMDRLGIESLIVLLVFAVAVAGLLGLAMALLTLRSNEIYFALLTLALAQLVYVV 135 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ +G FLG + L F YY++L + Sbjct: 136 GVRDIYGLSGGTDGMSVGTPDFLGLGLNELAFNTYMLG-------FYYYIVLLFLAGTIL 188 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + R+ + IR+N + + + + +S+ G+ GA +A RI Sbjct: 189 LMWAMLRSPFGLTLKMIRENPERAMMSGVPVERYRTYSMTLSAMITGLGGALYAVQLGRI 248 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +PD + ++ ++ + +LGGM + A IG+ EL Y+ Sbjct: 249 TPDQLYWVQSGEIVFMALLGGMGTFFGPIVGAAAFIGLQELTLRFTEYW----------- 297 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 H + +I L +V+ +R + Sbjct: 298 ---HFVMGLILLIVVVTLREDGIWG 319 >gi|312795314|ref|YP_004028236.1| branched-chain amino acid transport system permease protein livH [Burkholderia rhizoxinica HKI 454] gi|312167089|emb|CBW74092.1| Branched-chain amino acid transport system permease protein livH [Burkholderia rhizoxinica HKI 454] Length = 335 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 110/314 (35%), Gaps = 19/314 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ +GA + S Sbjct: 27 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAISVLQTHFPGLGNV 86 Query: 94 ----LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + ++A + G+ + + + +A LI + +L + G+ Sbjct: 87 PTLVIALVIAAAVCACLGITIEKVAYRPLRRAPRLAPLITAIGVSILLQTLAMVIWGRNP 146 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + V S + +++ + +++L + +T + A Sbjct: 147 LSFPQLISTDPINVIKATD----TSPGAVISPTEVVIIVTAFVVMVALLLLVHKTKLGRA 202 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R I +N + F + F + SA +AG A+ + M F + Sbjct: 203 MRAIAENPNVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGLKA 261 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ +L +L + +L G + ++ + + L Sbjct: 262 FTAAVLGGIGNLGGAMVGGVLLGLIEQLGAGYIGDFTGGVIG-----SNYQDVFAFVVLI 316 Query: 330 LVILMRSHSLLRLR 343 LV+++R LL R Sbjct: 317 LVLVLRPSGLLGER 330 >gi|163794785|ref|ZP_02188755.1| ABC transporter permease protein [alpha proteobacterium BAL199] gi|159180058|gb|EDP64583.1| ABC transporter permease protein [alpha proteobacterium BAL199] Length = 316 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 101/287 (35%), Gaps = 14/287 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ L + M +I+IY + A L I++G ++S IGA Sbjct: 14 VLLILFAAVPALANAADLGFATQMVSRIMIYAIAALSLDIILGYGAMVSFGHAAFIGIGA 73 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ I + + P++ + G ++ G L+ RG Y + TL ++ Sbjct: 74 YAVGIASAHDLWDASITFPMAMLGGGLFALVTGAICLRTRGVYFIMITLAFGQMAYFTAS 133 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + R F S + E YYV+L Sbjct: 134 SLSAYGG--------------DDGLTMWGRSEVFGYSPLENETTFYYVVLACLASCYVFA 179 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + +R+N+ ++ +L A+ ++ G+AGA A + +SP Sbjct: 180 KALVGSRFGRVIVGVRENRLRMQAVGFNPYAYQLVAYVIAGMMAGLAGALLANHTEFVSP 239 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 + + +I +V+LGG +L + + E+ + ++ Sbjct: 240 STMSWQRSGDLIIMVVLGGTGTLHGAILGAVAYLALEEILSHVTEHW 286 >gi|170732232|ref|YP_001764179.1| urea ABC transporter permease protein UrtB [Burkholderia cenocepacia MC0-3] gi|169815474|gb|ACA90057.1| urea ABC transporter, permease protein UrtB [Burkholderia cenocepacia MC0-3] Length = 539 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 77/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ + Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPGAFDWYPLVAVPVSFAVAALVGIV 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L + Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLASKA 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538 >gi|315503684|ref|YP_004082571.1| inner-membrane translocator [Micromonospora sp. L5] gi|315410303|gb|ADU08420.1| inner-membrane translocator [Micromonospora sp. L5] Length = 372 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 107/321 (33%), Gaps = 13/321 (4%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L + + L++ A G ++ G G+LS + +A G Y IL Sbjct: 52 LPGIFEGPLNSPGTLQLLAICLVFGGLAAGYDLLFGRTGMLSFGHALYFAAGVYGTDILV 111 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 ++ GL +W ++ + ++G +L+ G A+ TL +++ ++ + Sbjct: 112 TKAGLPLWQAAVLTVIGGTTLAALLGAVALRTVGIAFAMVTLAFAQVGAILVAR------ 165 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 L + + V + +Y++ L + ++ + + Sbjct: 166 ------DFGGLTGGEEGLPLDVSGLPAALVGVTNTVNLYWLALAYLAIVVLVVHRVSASP 219 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 +RD+++ L KL AF ++ G + SP + Sbjct: 220 TGRVLAGLRDDERRIGVLGLDPYRFKLVAFTLAGGLASAGGVVYVLIVGGASPHITSSEL 279 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY-YFNSLLKFDCSFNMRHTTLM 324 + ++ +V+LGG + + + + NSL F + ++ Sbjct: 280 TLSLLVMVVLGGPGTRWGPVLGGVLYMYLDHRLTAFGSSDAVNSLPAFLSHPLSQPLFVL 339 Query: 325 VIALFLVILMRSHSLLRLRTP 345 L + L LR+ Sbjct: 340 GTVFILAVYFFPGGLASLRSR 360 >gi|239814513|ref|YP_002943423.1| ABC transporter [Variovorax paradoxus S110] gi|239801090|gb|ACS18157.1| ABC transporter related [Variovorax paradoxus S110] Length = 595 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 115/323 (35%), Gaps = 22/323 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A + ++ L L + + S+ I I + A GL ++ G G S I Sbjct: 8 MAWIAAVVAVLALVPAVAGSFTVSLLNDIGIGALVALGLVLLTGVGGATSFGQAAFVGIA 67 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ L + GLS W+ + + +++G + +G+ +L+ G +L ++T+ + Sbjct: 68 AYATAWLTTTQGLSPWIGLLFALLLTGLSALAIGMLTLRLGGHFLPLSTIAWGLSIAMLF 127 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + G+ L R + MYY++ + L+ Sbjct: 128 GNVDAL-GRHTGLSNIPAL--------------RIAGWSLADPRSMYYLIWVVVGLACLF 172 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L ++ A R +R S+ +L+ F ++ F G+AG +A +S Sbjct: 173 SHNLLQSRPGRAIRGLRGGATLLASVGADAYRVRLTLFVTAALFAGLAGWLYAHMNRFVS 232 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F +I + + + GG+ L+ A+++ + + Sbjct: 233 PSPFDVRASIEYLLMAVAGGLGQLAGALVGAALVLVLKNGLQDVLPMLTQRA-------G 285 Query: 318 MRHTTLMVIALFLVILMRSHSLL 340 L++ L+ Sbjct: 286 QLEAVAFATLFILLLHFARGGLM 308 >gi|293607219|ref|ZP_06689560.1| ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292814311|gb|EFF73451.1| ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 375 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 96/338 (28%), Gaps = 32/338 (9%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 +F A Y ++ + + Y M A L +V G G+LSL + +A+G Y++ + Sbjct: 42 VFPAGHALHVSAYAVALLGKFMCYAMAALALDLVWGYAGILSLGHGLFFALGGYAHGMYL 101 Query: 86 S---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 W P + M L L Sbjct: 102 MRAIGRDGVYQSDLPDFMVFLDWKSYPWYWAYTEHFWYAMLLVVLVPGVLAFVFGYFAFR 161 Query: 131 EIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +I + D + R F + +Y+V Sbjct: 162 SRIKGVYFSIITQALTFAAMLLFFRNDTGFGGNNGFTDFKRILGFDITAPSTRATLYWVT 221 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + + + ++ + +RD + + + KL + +S+ G+AGA Sbjct: 222 LAALAGALILARMVTQSKLGRVLTAVRDAESRLRFIGYDPLGFKLFVWTLSAVLCGIAGA 281 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + I+P +I ++ V GG +L + G+ Sbjct: 282 LYVPQVGIINPSEMSTENSIEMVIWVATGGRGTLIGPIIGAGAVNGLKTW---------- 331 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + LV L ++ L Sbjct: 332 ----FTSVLPEFWLYALGLIFVLVTLFLPTGIVGLARR 365 >gi|170740836|ref|YP_001769491.1| urea ABC transporter permease protein UrtC [Methylobacterium sp. 4-46] gi|168195110|gb|ACA17057.1| urea ABC transporter, permease protein UrtC [Methylobacterium sp. 4-46] Length = 382 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 112/363 (30%), Gaps = 35/363 (9%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ--KYIDSMGIQILIYVMFAWGLSI 58 M++ + + +L AV P+L + + + Y S+ + L Y + A L + Sbjct: 1 MTLIDRKGWVFLAVLLAFAVAVPVLNLATVEGSAANVPTYAVSLMGKYLCYAILALSLDL 60 Query: 59 VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 V G G+LSL +A+G Y+ + R + LP Sbjct: 61 VWGYCGILSLGHGAFFALGGYAMGMYLMRQIGPRGVYGHPILPDFMVFLNWKDLPWYWHG 120 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFL 159 D+ A L++ + + + + + D Sbjct: 121 FDWFPFAALMVLLVPGLLAFVFGWLAFRSRVTGVYLSIITQAMTFALMLAFFRNDMGLGG 180 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + F + ++ + L+ + + +A IRD + Sbjct: 181 NNGLTDFKDILGFNVQAQGTRVTLFVLTAAALALAYLVARVMTTSAYGKVLIAIRDAESR 240 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 L K+ AF VS+ G+AGA + I+P F + +I + V +GG Sbjct: 241 TRFLGYRTAHFKVLAFTVSAMMAGVAGALYVPQVGIINPSEFTPANSIEAVIWVAVGGRG 300 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 +L A ++ L G + ++ +V L + Sbjct: 301 TLVGAALGGVLVNYAKTLLTG--------------AMPDAWLFMLGALFVVVTLFLPRGI 346 Query: 340 LRL 342 + Sbjct: 347 VGT 349 >gi|221211494|ref|ZP_03584473.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD1] gi|221168855|gb|EEE01323.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein [Burkholderia multivorans CGD1] Length = 316 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|33596706|ref|NP_884349.1| branched chain amino acid ABC transporter [Bordetella parapertussis 12822] gi|33573407|emb|CAE37391.1| Putative branched-chain amino acid transporter membrane protein [Bordetella parapertussis] Length = 337 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 126/323 (39%), Gaps = 29/323 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 P+L+ L ++++ + +FA ++++VG GLLSL + + + AY Sbjct: 11 PMLVLLACAMVAPAIVYPIFLMKVMCFAIFACAVNLLVGYAGLLSLGHSMFFGMSAYITA 70 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +G +P + + A G+I G +++ +G Y A+ TL ++++ ++ Sbjct: 71 HTLKVWGWPFEAALPAAVLACSALGLIAGAIAIRRQGIYFAMITLALAQMVYFFCLQAP- 129 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 T G+ G+ R LG + +Y V+L + + ++ Sbjct: 130 FTGGEDGLQNVPRPVVLGLFDTADDWK-------------LYVVVLAIFLAAVAVYHRAI 176 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + IRDN+ SL T+ KL AF +S+A G+AG A S Sbjct: 177 HSPFGEVAKAIRDNEPRAISLGYTVNRYKLLAFVISAALTGLAGGTKALVFQLASLTDVG 236 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + V+ +V++GGM ++ +++ + + + Sbjct: 237 WHISTEVVLMVLVGGMGTIIGPLVGAVLILAMQYYLAPLGEWV---------------MV 281 Query: 323 LMVIALFLVILMRSHSLLRLRTP 345 + L V+++ L+ Sbjct: 282 IQGAVLVTVVMIFRRGLVGEFEA 304 >gi|28870166|ref|NP_792785.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213970652|ref|ZP_03398778.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301382033|ref|ZP_07230451.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302060941|ref|ZP_07252482.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302133928|ref|ZP_07259918.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853412|gb|AAO56480.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924649|gb|EEB58218.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 355 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 143/352 (40%), Gaps = 22/352 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF LR ++ + + F+ + + + ++ I L+ + GL+++ G Sbjct: 18 RIFRLRQDR------VALWGLLVFAFVGVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GA++ + G+ + L + ++S A ++ GLPSL+ +G Sbjct: 72 YAGQLSLGSAAFMAVGAFAAYNLQLRVPGMPLLLGFALGGLVSAAVALLFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YL ++TL + + +L ++ TN A + + S + Sbjct: 132 YLLVSTLAAQFVVEWVLTRFSWFTNDNASGVITSPPLIIAGMNFSSPQG----------- 180 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Y + L + L + L R + W +RD A + + AKL AFA+S Sbjct: 181 --RYLLTLALVVLLFWLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGF 238 Query: 241 FIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 ++G+AG+ +A A + P F + + ++ I+I+GG+ S+ A ++ L Sbjct: 239 YLGIAGSLWAFAYLGTVEPHGFDLNRSFQILFIIIIGGLGSVQGNFFGAAFIVLFPILLG 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ L+ N++ L + ++ L RL R Sbjct: 299 NLSAQLPVGLIDSGQLENIQKM-LFGALIIAFLIKEPEGLARLWQRFRQRAR 349 >gi|73537614|ref|YP_297981.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72120951|gb|AAZ63137.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 349 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 129/326 (39%), Gaps = 16/326 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 Y LLL + + A Y + +++L + +FA ++++G GLLS + Sbjct: 8 ATFAYGLLLAVLVAAPFLGAYPV-LVMKLLCFALFACAFNLLLGFTGLLSFGHAAFFGGA 66 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ ++ L + + G+ G +++ +G Y A+ TL ++++F Sbjct: 67 AYACGYAMKSLHVTPELGLLLGTAFGALLGLAFGALAIRRQGIYFAMITLALAQMFYFFC 126 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 ++ +T G+ G+ R F + ++ YY++L + + Sbjct: 127 LQAP-VTGGEDGLQAVPRGS-------------LFGVVSLEPDMTTYYLVLAITAAAFLG 172 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I+ + + R I++N+ SL KL AF +SSA G+AGA + Sbjct: 173 IMRIVNSPFGQILRAIKENEPRAISLGYDADRFKLLAFVLSSALAGLAGALKTLVLGFAT 232 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSF 316 + + VI + ++GGM +LS +++ + + + + + S Sbjct: 233 LTDVHWMMSGAVILMTLVGGMGTLSGPIVGALVIVALENKLGDAGTALASLTGIPWFDSL 292 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + +L ++ Sbjct: 293 GESVSMVTGLIFVVCVLTFRRGVMGE 318 >gi|107021988|ref|YP_620315.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|116688932|ref|YP_834555.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|105892177|gb|ABF75342.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia cenocepacia AU 1054] gi|116647021|gb|ABK07662.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia cenocepacia HI2424] Length = 539 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 77/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ + Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPGAFDWYPLVAVPVSFAVAALVGIV 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L + Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLASKA 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538 >gi|153004319|ref|YP_001378644.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] gi|152027892|gb|ABS25660.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] Length = 366 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 69/344 (20%), Positives = 140/344 (40%), Gaps = 19/344 (5%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + +L L+ V + + + Y+ MG+ + + ++ ++V G G Sbjct: 9 RAPRGFSVLGLVLFVAAVAALWAFPSFVKKPYVLHMGVVLFLAIIQGQAWNVVGGYAGQY 68 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S+ + IGAY +L ++ W+ I + + A +++G + + RG Y +A+ Sbjct: 69 SVGHAAYFGIGAYVTTMLLELNKIAPWIGIWAAIAAAVALSLVIGSITFRLRGPYFVLAS 128 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + ++EI + + +K T G G ++D + Y+ Sbjct: 129 ISVAEIIRLAALHFKDFTRGAEGFLLSDIP----------ALKIGATEIEFFTKRPFYFA 178 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 LG+ ++ ++ + + ++ IR++Q A SL F K A A+S+AF AG Sbjct: 179 ALGLAVITIVANYLVQHSKLGYYFQAIREDQDAAHSLGINPAFYKNVALAISAAFTAWAG 238 Query: 247 AFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 F+A I P+ F ++ + I I+GG+ ++ +L+ + E+ Sbjct: 239 GFYAMFVKFIDPNTVFGLDVSVQFVLICIIGGIGTILGPVIGAMVLVPLSEVLRNPKGLV 298 Query: 306 FNSLLKFDCSF--------NMRHTTLMVIALFLVILMRSHSLLR 341 +L D F + H + I + +VIL +L Sbjct: 299 QLGILSSDSGFVRFVEANLSNAHLLVYGILVVIVILFAPEGVLG 342 >gi|104783825|ref|YP_610323.1| branched-chain amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95112812|emb|CAK17540.1| putative branched-chain amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 359 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 100/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 A + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 ALQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 DGLPGFMTFLSWSELPWYWAGTQHFAWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + S F + ++ + +G+ S + Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTSFRTILGFDIAAQGTRAVLFLLTVGLLLGSLFLC 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLTQSKFGRLLTAVRDAENRLMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + LV L ++ L Sbjct: 329 FWLFFLGALFILVTLYLPKGVVGL 352 >gi|121603908|ref|YP_981237.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120592877|gb|ABM36316.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 403 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 100/355 (28%), Gaps = 37/355 (10%) Query: 11 YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + + L VV + L L A Y ++ +I+ Y + A + ++ G G+ Sbjct: 53 WSAFVIALIVVCAVAPVLNLWVPEGHALHLSTYAVALLGKIMCYAICALAMDLIWGYTGI 112 Query: 66 LSLNCVIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIM 110 LSL + +A+G Y+ + W +P S + + Sbjct: 113 LSLGHGVFFALGGYTMGMYLMRQIGADGNYKSNLPDFMVFLDWKELPWHWTFSDSFVATL 172 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 L + + A + + R F Sbjct: 173 ILIVAVPGIVAFVFGYFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFK 232 Query: 171 RFPSSFVIYEIFMYYVLL---GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 R + + + WL + + IRD + + Sbjct: 233 RILDIPIATPSMRMTLFVMTGLTLLGFFLFAKWLVGSKFGRVLQAIRDAETRVMFSGYSP 292 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + KL+ + +S+ G+AGA + I+P + +I + +GG SL Sbjct: 293 LGYKLTIWVISAVMCGVAGALYVPQVGIINPGEMSPANSIEIAIWAAVGGRASLIGPIVG 352 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 I+ G ++ + V L + ++ L Sbjct: 353 AFIVNGAKSWLT--------------VAYPEFWLYFLGALFIGVTLFLPNGVVGL 393 >gi|115352595|ref|YP_774434.1| inner-membrane translocator [Burkholderia ambifaria AMMD] gi|171316759|ref|ZP_02905971.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] gi|172061457|ref|YP_001809109.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] gi|115282583|gb|ABI88100.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia ambifaria AMMD] gi|171098109|gb|EDT42924.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] gi|171993974|gb|ACB64893.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] Length = 316 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAVVCAFVGFAIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|312197074|ref|YP_004017135.1| ABC transporter permease [Frankia sp. EuI1c] gi|311228410|gb|ADP81265.1| inner-membrane translocator [Frankia sp. EuI1c] Length = 386 Score = 90.3 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 65/337 (19%), Positives = 129/337 (38%), Gaps = 18/337 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + A Y + + + GL++VVG G + + + +G Sbjct: 18 IVCCVAAAVIVLFLAAYEPDYRLVNYGSVAAWAVALLGLNLVVGYSGQFTFSQSAFFGLG 77 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y IL S +G +PV A+ G+++GLP+L+ RG YLAI + + F +I+ Sbjct: 78 GYVTAILVSDHGWPFLATLPVVAVAGAVVGLVLGLPALRVRGHYLAIISFALVVAFPSIV 137 Query: 138 I--KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + +T G G + + + + L + L Sbjct: 138 NMDQLRDLTGGANGKSAFI-----------EWSAPAWFPIAMSDRGWQFLTLAALAVLLF 186 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ R+ + A +RDN+ + ++ K SAFA+ SA + GA Sbjct: 187 WLVSNALRSRVGRALMAMRDNEIGAAASGISLALWKASAFAIGSALAALGGAMLLLVVPI 246 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + PD F + +I+ ++LGG +++ A A ++ + ++ + + Sbjct: 247 VGPDSGGFLVALELITGLLLGGSGTIAGAAIGGAAIVWLPQISQNLAGSLPFLDSNQAPA 306 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR--LRTPSNFLE 350 F + L +VI + ++ R FL Sbjct: 307 FTN---VVYGAILVVVIFVMPGGIVSFLRRARGRFLP 340 >gi|91978023|ref|YP_570682.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91684479|gb|ABE40781.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 336 Score = 90.3 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 16/292 (5%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 +++ L + ++ ++ +LIY + L+I+ G G SL YA+GAY+ Sbjct: 29 VVVVILLCVAPLIAKNFVIFQMTMVLIYAIAVLALNILTGGSGQFSLGQSAFYALGAYTS 88 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IK 139 IL G++ L +PV+ I G + GLP+L+ G YLA+AT ++ +L Sbjct: 89 AILMEVGGVNYALTLPVAGGICFIAGYLFGLPALRLSGIYLALATFALATAMPQLLKLHY 148 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ T G G+ + + ++++YY +L + + + Sbjct: 149 FEAWTGGVQGLVITKPDAPF--------------GLPLSQDMWLYYFVLAVSMVIYVASV 194 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L ++ A IRDN+ A ++ + K AF VS+ G+AG A + ++PD Sbjct: 195 NLLKSRSGRAMMAIRDNEIAASAMGVDVALYKTLAFGVSAGITGVAGGLGAIAVQFVAPD 254 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + I + +++GG+ L A ++ V + + ++ Sbjct: 255 SYTIQLAIALFLGMVVGGVGWLPGSIIGAAFIVFVPNIAEQFSKGLSGAVFG 306 >gi|91784958|ref|YP_560164.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91688912|gb|ABE32112.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia xenovorans LB400] Length = 316 Score = 90.3 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 99/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ +GA + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + ++ +I+ ++G + L A + I + Sbjct: 68 PTLVIALIIAAVVCAVVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ M F + + Sbjct: 188 AENPGNASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|85704488|ref|ZP_01035590.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] gi|85670896|gb|EAQ25755.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] Length = 657 Score = 90.3 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 107/322 (33%), Gaps = 26/322 (8%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR- 87 LG ++ + I+ + A GL+I G +G++++ +GAY+ ++ Sbjct: 357 ALGLYQTLDLVLDGLSLASIFFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFI 416 Query: 88 --YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 Y +S+ + +P++ +++ G+ M + + TL+ + L + Sbjct: 417 PDYTVSLIVALPLAFVVTFGAGVAMERLVI-RHLYTRPLETLLATFGISIALQQLAKNIF 475 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G + + + V + + ++ L+RT Sbjct: 476 GTQARPLTAP---------DWLSGALTLNDIVSISNIRVAIFVLALIFLTLLLFILKRTR 526 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + R + N S+ + F + S G+AG S + Sbjct: 527 LGLEVRAVTQNPGMAASMGIDPDRINMLTFGLGSGIAGIAGVAIGLYAQVTSEMGANYIV 586 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + +V + ++ +++ + + F+ S + T MV Sbjct: 587 QSFMTVVVGG--VGNVWGTLAGASMIGFLQ-----------KGIEWFNPSNTLAAQTYMV 633 Query: 326 IALFLVILMRSHSLLRLRTPSN 347 + + L I R ++ L+ + Sbjct: 634 LFVILFIQFRPKGIVALKGRAA 655 >gi|331695904|ref|YP_004332143.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326950593|gb|AEA24290.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 351 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 112/310 (36%), Gaps = 29/310 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + I + A L ++G GL SL + +GAY V+L + G Sbjct: 55 FVGIDSAQQFLLAYMAIIALLAISLHFLMGIAGLFSLGQAGFFGVGAYVGVVLMDKLGWD 114 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + +P+ A+ G++M + +L+ YLA+ TL + +N++ + + Sbjct: 115 GAIALPLVAVAGALVGLLMAVATLRASDLYLALTTLAFGFVGENVVRNIDYLGGAQ---- 170 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 F + + +Y++ LG + +I +RR+ + A Sbjct: 171 ------------GLAGFDLYFFGLTLDDPLLIYWIGLGCLIVFMVMITSMRRSRLGRALM 218 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 R+ A S+ + AF +S AF +AG+ + A + P +F V++ Sbjct: 219 AGREGPIAARSIGVDTGRYRFLAFGLSGAFAAVAGSLYTAYAYVLDPSVFGLGLTTTVLT 278 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 I I+GG+ S+ + A L G + + + L Sbjct: 279 IAIVGGLRSMPGVLVAAVALTWFRSAVDG-------------EAISEYVLLFYAALVVLT 325 Query: 332 ILMRSHSLLR 341 +L + Sbjct: 326 LLFLPQGIGG 335 >gi|72384134|ref|YP_293488.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72123477|gb|AAZ65631.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 320 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 118/324 (36%), Gaps = 28/324 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V P+++ L + ++ +ILI+ +FA L + +G + S V Y GAY Sbjct: 3 VTVPIVIVLAAAPLYLAGFQLTLLTEILIFALFAMSLDLQMGYARMFSFGHVAPYGAGAY 62 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 W I +S +I + +G + G A+ TL ++++ I+ K Sbjct: 63 IAAFAMMHGCSLPW-SILLSLVIVTILAIPIGWLCTRASGVAFAMLTLAIAQLTFAIVFK 121 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T G G+ R F Y++ LG+ + Sbjct: 122 WDKVTGGSDGLSGFIR------------NPGPFGFEGFASREGFYWLALGITVALFLLAR 169 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 R+ + A R++++ ++ ++ AF S+A +AGA A +SP+ Sbjct: 170 EFVRSPLGTAIVGARESEQRAVAIGYKPRSLRVVAFVASNALASIAGALHAGFLLFVSPE 229 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + +S + VI VILGG +L A+ + + + Sbjct: 230 ILHWSLSGHVIIAVILGGTGTLIGPMIGAALFVLAHHELSAVTDSWP------------- 276 Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343 +M + +++ L + Sbjct: 277 --LVMGLLFIFIVIAAPQGLWGFK 298 >gi|227326261|ref|ZP_03830285.1| putative branched-chain amino acid transport system, permease component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 529 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 84/288 (29%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ S + +++ + Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYATWLVQSLCQQFAPSWLAYYPLLALPVAFFITAGVGMV 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNLEVANPAWLSGGLRLLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V++ + + L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIAVIVFVLGVLLLTWLLLNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L + ++ Sbjct: 434 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++++ + L I R L + Sbjct: 492 LEPQIGAVLGK-------------IVILVLIVLFIQKRPQGLFAFKGR 526 >gi|84501967|ref|ZP_01000125.1| putative branched-chain amino acid transport system permease [Oceanicola batsensis HTCC2597] gi|84389962|gb|EAQ02596.1| putative branched-chain amino acid transport system permease [Oceanicola batsensis HTCC2597] Length = 357 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 78/324 (24%), Positives = 135/324 (41%), Gaps = 18/324 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + LLL L Y++S + LI+ A GL++V G G L L A+GA Sbjct: 28 LAAFILLLGLAAPFIIPSLYLNSYMLPWLIWTAAALGLNLVTGWAGQLHLGYAAVMAVGA 87 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 YS I +R+G+ + + ++S G + +L+ +G YLA+ TL M + +L Sbjct: 88 YS-AIHAARFGVPWEFALIIGGLMSSVIGSLFAFAALRVKGLYLALTTLAMQFVMDWVLT 146 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 I+ G + L + + YYV G C L + Sbjct: 147 HSPMISGGSHASLQSPTLA--------------LLGQDITSDTGYYYVAFGWCVLVTIFM 192 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-IS 257 L L+R + A +R+ A L + K+ AFA SS G++GA A+ + Sbjct: 193 LNLKRCGLGRALVAVREKDFAAAILGVNSFYYKILAFATSSFIAGVSGALLVATFFFLAA 252 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F + +I V+++VI+GG+ S+ A+++ V L G+ L Sbjct: 253 PEQFSVAVSIQVLAMVIVGGLGSIIGSYFGVALILLVPGLVNGLVVSISEGLGMQVNIET 312 Query: 318 MRHT--TLMVIALFLVILMRSHSL 339 + H + + +++L+ L Sbjct: 313 LAHIPNAVYGALIVVILLIEPLGL 336 >gi|332981087|ref|YP_004462528.1| amino acid/amide ABC transporter membrane protein 1 [Mahella australiensis 50-1 BON] gi|332698765|gb|AEE95706.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Mahella australiensis 50-1 BON] Length = 294 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 97/289 (33%), Gaps = 10/289 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y IGAY I + GL + + Sbjct: 8 LLNGISLGSIYALLALGYTMVYGIINLINFAHGDVYMIGAYIGFIATALLGLGFIPALLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S IS GM + + + + IA LI + +L G L Sbjct: 68 SMAISALLGMAIEKVAYRPLRNSSRIALLITAIGVSLLLEYTTMYIAGPDTRSFPTVLTN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + S V Y+L+ L + ++RT I A R + ++ Sbjct: 128 RQYSFMS---------GQVNISSMQLYILIISIILMILLQFIVQRTKIGKAMRAVSMDKD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + FA+ SA G AG + I P M + + + GG+ Sbjct: 179 AAQLMGINVDTTISATFAIGSALAGAAGILVGIYYNSIDPLM-GITPGLKAFIAAVFGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ +L + L G + + F + + Sbjct: 238 GSIPGAMVGGLLLGMIETLVSGYLDSNYRDAVAFVILIIILLIKPSGLL 286 >gi|27381586|ref|NP_773115.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354754|dbj|BAC51740.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 338 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA L + L Y + + ILI+ S+ +G GL+SL IG Sbjct: 7 LAWAVGLAALVALPFVYRDPYHLHILVLILIWSFAYTSWSM-MGRFGLVSLGHGGFMGIG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG--DYLAIATLIMSEIFQN 135 AY +L + G S W+ IP+S +G +I+G P +FR Y + TL +S I Sbjct: 66 AYVTALLWNHLGWSPWIGIPISMAAAGTLALIVGYPCFRFRITGHYFVLVTLALSGIVLQ 125 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ + T G G + + + + Y + LG+ Sbjct: 126 VITATRDYTGGSLGYT------------PNRASGNKLLALQFDDKTTWYLIALGVWLFGI 173 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + W+ R+ A I +++ A + + KL +S+ +AGA + + Sbjct: 174 VVWHWVDRSMSRYALEAISEDEDAAAAAGVDVTAEKLKITLLSALMTALAGAIYCQYQMF 233 Query: 256 ISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I+PD + ++ ++ I+GG+ I I + E + F Sbjct: 234 ITPDTVSGIAVSLQMVFAAIVGGLFVSLGPTFGAVITILLAESLR----------IGFGT 283 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + L L I+ +L Sbjct: 284 KAVGWDNLVYGVLLVLFIIFLPKGILG 310 >gi|89901941|ref|YP_524412.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89346678|gb|ABD70881.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 309 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G +GL++ +GA + + ++ Sbjct: 8 IINGLVLGSMYALVALGYTMVYGIIGLINFAHGEVLMVGALTSWTIIGWMQEAMPGTPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + +L F + +A L S ++ + + + + Sbjct: 68 LILLISLIIACVVSATLNFVIEKVAYRPLRDSPRLAPLITAIGMSLLLQTLAMIIWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ F + +L A ++ + T + A R +N + Sbjct: 128 --KPYPTLLPRTPFEIGGAVITPTQVLILGMTVVSLAVLMWLVNYTKLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +AA+ + M F + + + GG+ Sbjct: 186 VAALMGVKPDLVISATFVIGAVLAAIAGVMWAANYGTVQHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G +L + I L V+ +R Sbjct: 245 GNLGGAVLGGILLGLIESLGAGYIGTVTGGVLG-----SHYSDIFAFIVLIFVLTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|325527364|gb|EGD04721.1| inner-membrane translocator [Burkholderia sp. TJI49] Length = 316 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 99/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G LG+++ IGA + + L V Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPALGNV 67 Query: 99 SAM-----ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAIVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|323498862|ref|ZP_08103845.1| branched-chain amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326] gi|323315974|gb|EGA69002.1| branched-chain amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326] Length = 397 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 101/349 (28%), Gaps = 33/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + ++ + ++ + + S+ + L Y M A + +V G LG+LSL Sbjct: 30 AILAAVILIPAANMMLSASHPLHVETFTISLLGKYLSYAMLALAVDLVWGYLGILSLGHG 89 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+G Y+ + R + LP D A L++ Sbjct: 90 AFFALGGYAMGMYLMRQIGDRGVYGNPILPDFMVFLNWQELPWFWHGFDQFWFAALMVVL 149 Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172 + + + + + + + + F Sbjct: 150 VPGAMAYVFGYLAFRSRVSGVYLSIITQALTYALMLAFFRNEMGFGGNNGLTDFKDILGF 209 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 I ++ +S + + + + IRD++ + + KL Sbjct: 210 SLQQDSTRIALFIATGIALIVSYLVCRSVVSSRLGRVSVAIRDSESRTRFMGYDVDGIKL 269 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 F +S+ G+AGA + I+P F +I V+ V LGG +L ++ Sbjct: 270 WVFVLSAVIAGIAGALYVPQVGIINPGEFAPLNSIEVVVWVALGGRATLFGAIVGALVIN 329 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F F + L L L+ Sbjct: 330 YAKSW--------------FTVEFPEVWLFALGGLFVLSTLYFPKGLIG 364 >gi|322373954|ref|ZP_08048489.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. C150] gi|321277326|gb|EFX54396.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. C150] Length = 294 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 105/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y IGA+ + ++ W+ + Sbjct: 10 LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMIGAFVGYYAINSLKMNFWIALVF 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G+++ + + + I+ LI + L G Sbjct: 70 SMIVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVYFVGADTRS------- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ + + +L+ L ++ L +++T + A R + + Sbjct: 123 ----FPQSIKMHTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S+ G AG + I P M + I +LGG+ Sbjct: 179 AAELMGINVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L + + ++ L +++L+R Sbjct: 238 GIIPGAALGGFVIGILETLSTAIG-------------LSSYRDAIVYGVLIVILLVRPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|251790327|ref|YP_003005048.1| urea ABC transporter permease protein UrtB [Dickeya zeae Ech1591] gi|247538948|gb|ACT07569.1| urea ABC transporter, permease protein UrtB [Dickeya zeae Ech1591] Length = 525 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ + + + + + + + + Sbjct: 252 ITYGLLGVINMAHGEMLMLGAYSTWLVQNLFQRLLPDWLALYPLAALPVAFFITAAVGML 311 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + V L + + Sbjct: 312 LERAI--IRHLYGRPLETLLATWGISLMLIQLVRVLFGTQNLEVANPGWLSGGWSALPNL 369 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V++ + + L L +T + R + N++ + AF + Sbjct: 370 VLPYNRIAVMIFVVGVLILTWLLLNKTRLGMNVRAVTQNRRMADCCGVPTGRVDMLAFGL 429 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+ GG+ L+ A L + ++ Sbjct: 430 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVTGGVGQLAGTVVAALGLGVLNKV 487 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +++ + L I R L + Sbjct: 488 LEPQMGAVLGK-------------IAILVLIVLFIQKRPQGLFAFKGR 522 >gi|302874077|ref|YP_003842710.1| inner-membrane translocator [Clostridium cellulovorans 743B] gi|307689666|ref|ZP_07632112.1| inner-membrane translocator [Clostridium cellulovorans 743B] gi|302576934|gb|ADL50946.1| inner-membrane translocator [Clostridium cellulovorans 743B] Length = 291 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 104/307 (33%), Gaps = 25/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ Y IGA++ + GL + + + Sbjct: 7 LVNGLALGSVYALLALGYTMVYGIIQLINFAHGEIYMIGAFAGFYSATTLGLPLIPTLLI 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++S G+I+ + K + I LI + +L I G Sbjct: 67 AMLVSALAGIIIEKIAYKPLRNSPRITLLITAIGISLLLQNAMRILVGSNPKP------- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 LI + E + + L + + +T I A R + + Sbjct: 120 ----FPDLINAGVLSIGPIEIEWKTILMFVVSSLLVIVLQFIVYKTKIGKAMRASSQDME 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FAV SA G++G A S I+P M + +LGG+ Sbjct: 176 AASLMGINVNNTISFTFAVGSALAGISGVLVAISYPSITPYM-GVMPGLKSFVAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + + G F+ + F L ++L++ Sbjct: 235 GSIPGSLLGGICIGLLETFSKGYISTKFSDAIVFG-------------VLVAILLIKPSG 281 Query: 339 LLRLRTP 345 LL + Sbjct: 282 LLGKKNR 288 >gi|86140099|ref|ZP_01058662.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] gi|85823194|gb|EAQ43406.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] Length = 356 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 119/336 (35%), Gaps = 9/336 (2%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + L+ +I I+++ +++G G++S + + Sbjct: 16 LALILGGILICLALAPFLFPGVRTVDTAARICIFIVLVASYDLLLGYGGIVSFAHTMFFG 75 Query: 76 IGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 IGAY + G + A ++ A +++GL SL+ R + A+ TL ++ Sbjct: 76 IGAYGVALTSVHMGRGFDAIAIGALAGAGLAAALALLIGLFSLRVRAIFFAMITLAVASA 135 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF-VIYEIFMYYVLLGMC 191 ++ + +T G+ G+ F + ++ YY + Sbjct: 136 VAVLVSQLSGLTGGEDGLTFKTPRQLGPAFKFGKEMFDGSLFGVKLNGKLLAYYFVFIGA 195 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L +L + + + IR+N S+ +++ +++A +S+A +AG+ +A Sbjct: 196 TLLFLALLRVVNSPFGRVLQAIRENDFRAESIGYRVVYYRVAATCLSAAIAALAGSLYAV 255 Query: 252 SRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY----YF 306 + PD I ++ +V++GGM +L + + + Sbjct: 256 WLRYVGPDTVLSMELMIDILLMVVIGGMGTLYGAMIGATLFVLAQNYLQNLMGAASHLVE 315 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L + R + + L + ++ Sbjct: 316 GLPLLPELLSADRWLLWLGVLFILSVYFFPTGVVGR 351 >gi|269793035|ref|YP_003317939.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100670|gb|ACZ19657.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] Length = 286 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 114/316 (36%), Gaps = 43/316 (13%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ S+ I + GL+I G G+ SL IGAY IL Y + L + Sbjct: 2 DYVLSILSLGAINGIAVLGLAIFTGFTGMFSLGHSAFVGIGAYGSAILTYYYFVPFPLAL 61 Query: 97 PVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 ++++ G+++G P+ R DY AIA L E F+ ++ Sbjct: 62 LAGSLMAALVGLLVGAPALKADLRSDYFAIAILGFGEAFRVLVENLDLTNGA-------- 113 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + + G L+ ++ R+ + + +R Sbjct: 114 ------------------RGLPGLEPFSTPAWIFGCLALALALAFNFVRSPLGRSCAAVR 155 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++ A ++ +L + A S+A G++G A + P MF +++ ++++ VI Sbjct: 156 EDPVAAQMAGVSLFTVRLCSLAFSAALCGLSGGLMAHYLSFVQPSMFTLTQSTMLLAAVI 215 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 GGM SL+ A I + + E M + L ++++ Sbjct: 216 AGGMGSLTGPLLAAFIFVALPEALR---------------MAQMWRLAAYGLILVAMMVL 260 Query: 335 RSHSLLRLRTPSNFLE 350 R L+ R L Sbjct: 261 RPKGLMGYREVWQLLP 276 >gi|187925118|ref|YP_001896760.1| branched-chain amino acid ABC transporter inner membrane protein [Burkholderia phytofirmans PsJN] gi|187716312|gb|ACD17536.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 316 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ +GA + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + ++ +I+ +G + L A + I + Sbjct: 68 PTLIIALIIAAIVCAAVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ M F + + Sbjct: 188 AENPGNASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L IL + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|295095870|emb|CBK84960.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 524 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 85/288 (29%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ + + + +++ + Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYATWMVQQVMAQWMPQWLALYPVVALPVAFCLTAGIGMV 310 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + + Sbjct: 311 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPAWLSGGVQVFANL 368 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 VL + + L L +T + R + N+ + AF + Sbjct: 369 TLPWNRIVVLGFVLMVLFFTWLILNKTRLGLNVRAVTQNRSMAACCGVPTGRVDMLAFGL 428 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L ++ Sbjct: 429 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 486 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L+++A+ L I R L L+ Sbjct: 487 LEPQMGAVLGK-------------ILILVAIILFIQKRPQGLFALKGR 521 >gi|172065387|ref|YP_001816099.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] gi|171997629|gb|ACB68546.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] Length = 316 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + I+ +G + L A + I + Sbjct: 68 ATLTIGLGIAAVVCAFVGFAIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + ++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ + F + F + SA +AG A+ + M F + + Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|315427792|dbj|BAJ49386.1| branched-chain amino acid ABC transporter, permease [Candidatus Caldiarchaeum subterraneum] Length = 379 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 130/337 (38%), Gaps = 38/337 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L L L + + + + ++V+ A ++VG G+++L +G Sbjct: 19 LMGAIALAAVLGVLPFFADDSLVHVLGMTFLFVLLAVSWDLIVGYTGVVNLGLTTFVGLG 78 Query: 78 AYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 Y+ +L L I IPV+ +++ G+++GL +L+ +G Y A Sbjct: 79 GYASALLIERQRLAGSELSFLTEFPPLPIHATIPVAGLVAAFLGLLVGLLTLRLKGWYFA 138 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 + T I+ +F WK + G+ G I Sbjct: 139 LVTAILPLVFMQTTYVWKEVFGGEEGFV--------------------VKVGLGATAIER 178 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 YY L + L+ + +L L R+ I W+ +R+++ A +L + + KL AF VSS G Sbjct: 179 YYAALAVLLLTLAGVLVLTRSRIGLRWKALREDEVAAEALGVSTMRYKLLAFVVSSFIAG 238 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 + GA R + D++ S ++VI V++GG ++ ++ V Sbjct: 239 VVGAMIVHYRMIANNDLYDISLLLLVILAVVVGGQGTIWGPVVGGFLVYTVKNWWLKPLV 298 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + + + L+ L + + R H L Sbjct: 299 FGYL----WPMGIPLNDDILLYSILIVFAVARPHGLW 331 >gi|296157150|ref|ZP_06839986.1| inner-membrane translocator [Burkholderia sp. Ch1-1] gi|295892486|gb|EFG72268.1| inner-membrane translocator [Burkholderia sp. Ch1-1] Length = 316 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 99/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ +GA + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + ++ +I+ ++G + L A + I + Sbjct: 68 PTLVIALIIAAIVCAVVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ M F + + Sbjct: 188 AENPGNASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|320527723|ref|ZP_08028893.1| amino acid or sugar ABC transport system, permease protein [Solobacterium moorei F0204] gi|320131888|gb|EFW24448.1| amino acid or sugar ABC transport system, permease protein [Solobacterium moorei F0204] Length = 317 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 66/322 (20%), Positives = 131/322 (40%), Gaps = 45/322 (13%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + +LL + + + Y + I I I V+ L++ G LG L+L A G Sbjct: 17 ITALGYILLVILMRIGALKSYWQGILITICINVILTVSLNMTAGFLGELALGHAGFMAAG 76 Query: 78 AYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 AY+ + + + I + +++ G+++ LP+L+ RGDYLAI TL EI Sbjct: 77 AYASAVFTKSMRLLPIIEFPVAIIIGGIVAMILGLLVCLPTLRLRGDYLAIITLAFGEIV 136 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 +N+LI K + I + + + + Sbjct: 137 RNVLINLKVLGGA--------------------------GGYSAITKNTTFTWAFALAVI 170 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + L L + + IR+++ A S K+ F S+ F G+ GA +A Sbjct: 171 TVFLSLSLIHSRHGRSIIAIREDEIAAESSGINTQKYKIITFLYSAFFAGVGGALYAHYM 230 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + P +F ++I ++ +V+LGGM ++ + ++L + E+ ++ Y Sbjct: 231 GFLQPSVFTLDKSIEILVMVVLGGMGNIFGSIVSASVLTLLPEVLRSVSDY--------- 281 Query: 314 CSFNMRHTTLMVIALFLVILMR 335 + + L L++L++ Sbjct: 282 ------RMLVYSVVLILMMLVK 297 >gi|288920144|ref|ZP_06414461.1| ABC transporter related protein [Frankia sp. EUN1f] gi|288348475|gb|EFC82735.1| ABC transporter related protein [Frankia sp. EUN1f] Length = 963 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 120/315 (38%), Gaps = 19/315 (6%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 L + S I I + + +V G G +SL + A++ L S Sbjct: 334 LGVLALLLTDGTWRSAVIGTFIGAVIGLSVVVVTGFAGQVSLAQLALAGCAAFTLSGLTS 393 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +G+ + ++A+++ A G+++GLP+L+ RG L I L ++ + + + + Sbjct: 394 GWGVPFPVAPLLAALVATAVGVLVGLPALRLRGLTLGIVALALAYAIEAVWFRNSDFVSS 453 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 L+ L + S F R P + L + A + LR +A+ Sbjct: 454 DGATVEQPTLFGLDLGIGSGHAFPRLPFG---------LMCLAVLVAVAWGVARLRMSAL 504 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 +A +R N+++ + ++ K+ +FA++S G+ G+ A R ++ D F Sbjct: 505 GSAMLAVRANERSAAGIGIDVVRVKVISFALASFIAGLGGSLLAYRRGVVTFDSFSAIAG 564 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + ++S L G+TS+ A + V + L + Sbjct: 565 LTLLSTAYLAGVTSVYGGILAGVMGGSGVAFV----------AMDRWVDLGDWFPVLSGL 614 Query: 327 ALFLVILMRSHSLLR 341 + V++ L Sbjct: 615 GVIGVLIGHPEGLAS 629 >gi|218439808|ref|YP_002378137.1| urea ABC transporter permease [Cyanothece sp. PCC 7424] gi|218172536|gb|ACK71269.1| urea ABC transporter, permease protein UrtC [Cyanothece sp. PCC 7424] Length = 385 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 100/354 (28%), Gaps = 35/354 (9%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ ++ ++ ++ + + L ++ + + L + A G+ ++ G GL Sbjct: 13 VKKHRRRLVIEGAIILGLAFILVVLMPFLLSEFRLKLLGRFLSLCLVALGIDLIWGYTGL 72 Query: 66 LSLNCVIAYAIGAYSYVI-----------------LGSRYGLSIWLLIPVSAMISGACGM 108 LSL I +A+G Y + G W + A + Sbjct: 73 LSLGHGIFFALGGYGLAMYLNLQLPEGQIPEFFTLYGVTQLPLFWQPFNSFFLTCLAIII 132 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 I L + + + + L Sbjct: 133 IPSLVAGLLGYLIFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLK---TDTQT 189 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 F ++ Y + + + L + WL + IRD++ Sbjct: 190 IFGALVGSSPVQLAFYEITIVLLILIYLLCRWLTSGRFGRLLKAIRDDEIRVRFSGYNPT 249 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 K+ FA+S A G++GA + I + +I ++ V +GG +L Sbjct: 250 GFKVLVFAISGAIAGISGALYTVQSGIIAPSPSLDVAFSIEMVIWVAVGGRGTLIGAILG 309 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 T ++ L F +V+ + +L Sbjct: 310 TLLVNWGKTLLSE--------------QFPEIWLFFQGALFLIVVTVLPEGILG 349 >gi|254253038|ref|ZP_04946356.1| ABC-type branched-chain amino acid transport system permease component [Burkholderia dolosa AUO158] gi|124895647|gb|EAY69527.1| ABC-type branched-chain amino acid transport system permease component [Burkholderia dolosa AUO158] Length = 395 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 97/346 (28%), Gaps = 32/346 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 52 IAIGIGVPLAALVAPESSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + G ++ L Sbjct: 112 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLGWALALVVLVPA 171 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R FP + Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPIT 231 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 232 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGEARLMFLGYSPLAYKLFVW 291 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 292 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L F + + LV L+ ++ Sbjct: 352 SLFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIVG 383 >gi|218294979|ref|ZP_03495833.1| inner-membrane translocator [Thermus aquaticus Y51MC23] gi|218244887|gb|EED11411.1| inner-membrane translocator [Thermus aquaticus Y51MC23] Length = 334 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 99/315 (31%), Gaps = 14/315 (4%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-------VILGS 86 + I + +Y M A G ++V G L L++ + IGA Sbjct: 20 LLPQVIFDGFVLGFVYAMVALGYTMVYGVLELINFAHSEIFMIGAVVGVEVFRYLGPHVG 79 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 L + + + + I+GA +++ + + L+ + + + Sbjct: 80 NGYLLLLVALLLGGAIAGATAILVERFAYRPLRKRGTTNRLVPLITAIGVSFILQDLVRL 139 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G++ + + T F F + + ++L + + + RT + Sbjct: 140 IEGLWHNEFFLRMRTMEDLEGSFDLF-GGAIFIQTKSLILILVSILMLLGLTYLVNRTKL 198 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A R + + + F + + G+AG FA +SP + F Sbjct: 199 GVAIRAVAQDLHTASLMGIDPDRIISRTFLIGGSLGGVAGVLFALQYTTVSPYV-GFLPG 257 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I + +LGG+ ++ +L + + + + Sbjct: 258 IKAFTAAVLGGIGNIPGAMLGGLVLGQLENFFGTYLPILTSGNFG-----TEYKDVVAFL 312 Query: 327 ALFLVILMRSHSLLR 341 L ++L R LL Sbjct: 313 ILVFILLARPQGLLG 327 >gi|311108398|ref|YP_003981251.1| urea ABC transporter permease UrtC 2 [Achromobacter xylosoxidans A8] gi|310763087|gb|ADP18536.1| urea ABC transporter, permease protein UrtC 2 [Achromobacter xylosoxidans A8] Length = 375 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 96/338 (28%), Gaps = 32/338 (9%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 +F A Y ++ + + Y M A L +V G G+LSL + +A+G Y++ + Sbjct: 42 VFPPGHALHVSAYAVALLGKFMCYAMAALALDLVWGYAGILSLGHGLFFALGGYAHGMYL 101 Query: 86 S---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 W P + M L L Sbjct: 102 MRAIGRDGVYQSDLPDFMVFLDWKSYPWYWSFTEHFWYAMLLVVLVPGVLAFVFGYFAFR 161 Query: 131 EIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +I + D + R F + +Y++ Sbjct: 162 SRIKGVYFSIITQALTFAAMLLFFRNDTGFGGNNGFTDFKRILGFDITAPGTRAALYWIT 221 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + + + ++ + +RD + + + KL + +S+ G+AGA Sbjct: 222 LAALAGALILARLVTQSKLGRVLTAVRDAESRLRFIGYDPLGFKLFVWTLSAVLCGIAGA 281 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + I+P +I ++ V GG +L + G+ Sbjct: 282 LYVPQVGIINPSEMSTETSIEMVIWVATGGRGTLVGPIIGAGAVNGLKTW---------- 331 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + LV L ++ L Sbjct: 332 ----FTSVLPEFWLYALGLIFVLVTLFLPTGIVGLARR 365 >gi|317054295|ref|YP_004118320.1| inner-membrane translocator [Pantoea sp. At-9b] gi|316952290|gb|ADU71764.1| inner-membrane translocator [Pantoea sp. At-9b] Length = 295 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 63/308 (20%), Positives = 124/308 (40%), Gaps = 19/308 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 ++ ++ IY + A L++ G GLL+ + +GAY+ + S++G S+WL Sbjct: 2 SDFLLNIFCLAGIYAVIALALNLQAGYAGLLNFGHIAFVGMGAYAVAL-SSQFGWSLWLA 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P+ + + ++M + DY IATL ++EI + + T G GI Sbjct: 61 LPLGMIAAMLVSLLMATLGRQLAADYWGIATLALAEIIRIAITNEDQYTGGAQGIGAISA 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + G + + V++ LS + + L + A R +R+ Sbjct: 121 PWASGVQSQD--------------GLIFGVVIVLAVVLSILVSVRLANSRFGRALRLMRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + + K A S+ +AG A + SPD SE ++ S+V++ Sbjct: 167 QPQLAVCMGYALPWLKCRALMCSAVMCSLAGMLLAWYTNYASPDYLLSSETFLIWSMVMI 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ + ++ E + + + L L+ I L L +L+R Sbjct: 227 GGLGNVRGVLLGVLVV----EALYNLIPFAKDYLHFSADLTGALRLGLVGITLLLCLLLR 282 Query: 336 SHSLLRLR 343 LL + Sbjct: 283 PAGLLPEK 290 >gi|239905846|ref|YP_002952585.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239795710|dbj|BAH74699.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 361 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 109/344 (31%), Gaps = 8/344 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L +L G Y S+ + + + ++ A L+I+ G++G S Sbjct: 8 VPALLACLFGVLLWAAGTGALNVYWQSVLMFMGVNIILATSLNIINGNMGEFSCGHAGFM 67 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+GAY +L + S A + + L + + Sbjct: 68 AVGAYVSSLLSVALFTKSQVFGEPLIGPSAAVWLFPLVLIAGALAASLVGLLVAIPSFKT 127 Query: 135 N--ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 L + + G + + I ++ + Sbjct: 128 RGDYLAIITIAAAYIVKSTIENIGAIGGARGFMGMSAVMSAMNETINLPWIMIWVFIGTV 187 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S +I + I ++ A ++ KL AF VS G+AG FA Sbjct: 188 FSVWLIRRFIYSTFGKGVDAICQDEIAAEIMSVNTDRVKLVAFMVSCGLAGLAGGLFAHI 247 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 ++P F ++ ++ +V LGGM SLS A ++ ++E + L Sbjct: 248 LGYVNPGTFTILKSTEIMVMVYLGGMGSLSGSVLAAILMTLLIEYLRDAFGFLNTFLHYI 307 Query: 313 DCSF------NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + ++ + L L++ R ++ R ++ Sbjct: 308 SVIPDSYEVTQVWKWVVIPLLLVLLMQFRPEGIMGRRELADVFP 351 >gi|33596724|ref|NP_884367.1| ABC transporter permease [Bordetella parapertussis 12822] gi|33573425|emb|CAE37409.1| Putative ABC transport system, permease protein [Bordetella parapertussis] Length = 299 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 16/305 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ ++ I +LIY++ A GL++ G GL++ V YAIGAY+ +L + G + I Sbjct: 4 AYLIAIFITVLIYMLLAGGLALQYGFTGLINFGHVGFYAIGAYTSALLSLQGGP-LVACI 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++SG +G+ +L+ RGDYLAI TL SE + IL K + +T G GI RL Sbjct: 63 LAATLVSGLSAYPLGVIALRLRGDYLAIVTLGFSESVRMILQKEEWLTRGVHGIPGIPRL 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + +S + ++ + LL L I + + + IRDN Sbjct: 123 F-------------GQYASGAMVDVLILATLLLTNILVFLGIRKIIGSPFGRTIKAIRDN 169 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A +L + K + + +A G+AGAF A I+P+ F V +I+G Sbjct: 170 EVAVMALGKNPAWFKTRSLMIGAALAGLAGAFTAHYLTFIAPEQFVPLITFYVWIAIIVG 229 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL + T IL+ +E + + F + + ++ + L L IL R Sbjct: 230 GVGSLKGVVAGTVILMVFLEGSRFVREFLFFDISE--VQMASLRFFIIGVGLILCILYRP 287 Query: 337 HSLLR 341 + + Sbjct: 288 NGIFG 292 >gi|192362311|ref|YP_001981731.1| putative permease of ABC transporter [Cellvibrio japonicus Ueda107] gi|190688476|gb|ACE86154.1| possible permease of ABC transporter [Cellvibrio japonicus Ueda107] Length = 383 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 99/347 (28%), Gaps = 33/347 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L ++ V LL + ++ + L Y + A + ++ G G+LSL + Sbjct: 22 LAMVIVPVCNLLIPEGSPLHISTFTVTLLGKFLCYALLALSVDLIWGYCGILSLGHGAFF 81 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+G Y+ + R LP D A L++ + Sbjct: 82 ALGGYAMGMYLMRQIGPRGQYGDPVLPDFMVFLNWQELPWYWLGFDMFWFAMLMVLLVPG 141 Query: 135 NILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + + + + + + F S Sbjct: 142 LLAFVFGWLAFRSRVTGVYFSIITQALTYALLLAFFRNEMGFGGNNGLTDFKDILGFSIS 201 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 I ++ M L+ ++ + + +IRD + + KL F Sbjct: 202 ANGTRISLFLASGVMLILAYLACRYIVTSRMGKIIVSIRDAESRTRFCGYQVESYKLWLF 261 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 S+ G+AGA + I+P F +I ++ V GG +L + Sbjct: 262 VFSAILAGIAGALYVPQVGIINPGEFSPLNSIELVVWVATGGRGTLFGAIVGAFSVNYGK 321 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L + + LV L+ L+ L Sbjct: 322 TLFTSYS--------------PETWLFALGALFVLVTLILPQGLVGL 354 >gi|39936729|ref|NP_949005.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] gi|39650585|emb|CAE29108.1| possible permease of ABC transporter [Rhodopseudomonas palustris CGA009] Length = 399 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 107/360 (29%), Gaps = 38/360 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFLFL------GATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 L++ I +L +LL L A Y+ S+ + + Y + A + ++ G Sbjct: 18 LDRGATIFLVLLAAIGILLPLLNLLTPESSALHVPTYLISLFGKYVCYALLALSIDLIWG 77 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G+LSL +A+G Y+ + R + + + LP + D Sbjct: 78 YCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYANPTLPDFMVFLNWKELPWYWYGFDM 137 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162 A +++ + + + + + D + Sbjct: 138 FWFAAVMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 197 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + F ++ + + I + + + IRD + Sbjct: 198 LTDFKDILGFNVQADGTRAALFMLSCLALAIGFFICRAVVTSKLGKVLIAIRDAESRTRF 257 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L + KL F +S+ G+AGA + I+P F +I + V +GG +L Sbjct: 258 LGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWVAVGGRGTLV 317 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A ++ + ++ V L+ ++ Sbjct: 318 GAALGAIVVNYAKTVFTS-------------GPLAPYWLFMLGALFVAVTLLLPKGIVGT 364 >gi|218245209|ref|YP_002370580.1| inner-membrane translocator [Cyanothece sp. PCC 8801] gi|218165687|gb|ACK64424.1| inner-membrane translocator [Cyanothece sp. PCC 8801] Length = 377 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 67/374 (17%), Positives = 132/374 (35%), Gaps = 63/374 (16%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 YI + +Y +FA GL++ G GL++ V +GAY+ +L + I + Sbjct: 8 SGYIVFLATSAGLYAIFALGLNLQWGFTGLINFGVVAFMTMGAYTTALLTLKG-TPIIIA 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + A++S G+ +GL +L+ R DYLAI T+ +SE+ + I + +T G G+ Sbjct: 67 VLIGAILSAILGLGIGLSTLRLREDYLAIVTIGVSELIRLIANNEEWLTGGTFGVRSYSL 126 Query: 156 L-----------------------------------YFLGTTVRSLIRFFRFPSSFVIYE 180 + ++ R P S + + Sbjct: 127 PLDIEPNFLIKFLLIIALTFLAIYAEWVLCRSLSEQWRQHKQIQGKSYQPRKPISLITWG 186 Query: 181 IFMYYVLLGMCFLSASIILWLR------------------------RTAISNAWRTIRDN 216 I ++L + + + + IR++ Sbjct: 187 IIGTILILLVYIPGIVALSNYTYKAGLMVLILAVLAIIYAGLEFLVHSPWGRILKAIRED 246 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L ++ KL +F + A G+AG+FFA I P F+ IV+LG Sbjct: 247 EDVAKALGKNVLLYKLQSFMLGGAIAGIAGSFFAWQLTTIYPKSFEPLLTFNAWIIVVLG 306 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G S + I + + Y+ + ++ + L ++++ R Sbjct: 307 GAGSNAGTLLGAIIFWSYDSITRFLLPYFG---IFDQSQAAAFRVMIIGLILMVLMVWRP 363 Query: 337 HSLLRLRTPSNFLE 350 +L + + Sbjct: 364 QGILGKKEELTLGK 377 >gi|116627275|ref|YP_819894.1| branched chain amino acid ABC transporter permease [Streptococcus thermophilus LMD-9] gi|116100552|gb|ABJ65698.1| Branched-chain amino acid ABC-type transport system, permease component [Streptococcus thermophilus LMD-9] Length = 294 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y IGA+ + ++ W+ + Sbjct: 10 LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYTIGAFVGYYAINSLKMNFWIALVF 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G+++ + + + I+ LI + L G Sbjct: 70 SMIVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVYFVGADTRS------- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ + + +L+ L ++ L +++T + A R + + Sbjct: 123 ----FPQSIKVHTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + ++ FA+ S+ G AG + I P M + I +LGG+ Sbjct: 179 AAELMGISVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L + + ++ L +++L+R Sbjct: 238 GIIPGAALGGFVIGILETLSTAIG-------------LSSYRDAIVYGVLIVILLLRPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|228997068|ref|ZP_04156699.1| Branched chain amino acid ABC transporter, permease [Bacillus mycoides Rock3-17] gi|228762693|gb|EEM11609.1| Branched chain amino acid ABC transporter, permease [Bacillus mycoides Rock3-17] Length = 333 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 120/325 (36%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L+ + + + Q+ I+ +FA I++G G++S + + IGAY Sbjct: 14 LVVLICLSVFPFVNDSRSLLILFTQVFIFAIFAMSFDILLGYTGIVSFGHCMFFGIGAYC 73 Query: 81 YVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + S + I ++ ++S I+G+ SL+ + + A+ TL +S++F + Sbjct: 74 VALLLDRQEVSIASFLIGIGIAVVLSAIISYIIGMLSLRLKSHFYAMLTLAISQLFFVLA 133 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ T+G G F YY+ L + + Sbjct: 134 EKWRSFTHGGDGFTFRVPDMFRDRF-------------------TFYYITLICLVVIFLL 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L I+ K+ A V+ ++G F + ++ Sbjct: 175 LRLFTQSSIGKVLKAISQNEQRVEALGYKILHYKIIASIVAGVVAALSGGLFVITLRFVN 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L I+ + + Sbjct: 235 TTVFSIEMTLNALLMTMIGGVGTLVGAIAGAGIIEFLKYYLSELAA---------QYPIF 285 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T + + +V+L L Sbjct: 286 ERWTIFLGLLYIIVLLGFPTGLTGT 310 >gi|134096409|ref|YP_001101484.1| putative high-affinity branched-chain amino acid transport system permease protein braE [Herminiimonas arsenicoxydans] gi|133740312|emb|CAL63363.1| Putative ABC-type branched-chain amino acid transport system, permease component [Herminiimonas arsenicoxydans] Length = 388 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 133/319 (41%), Gaps = 20/319 (6%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 ++ M +L+Y GL++ G G+ + + IG+Y+ +L + GL Sbjct: 87 FYDSHFVLLMIGGVLLYATACMGLTVQFGFSGVSNFAGAAFFGIGSYTTAVLATHTGLPT 146 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + I +S +++ G I+ P L+ RG Y A+ T+ I ++ + G G+ V Sbjct: 147 LVTIAISGIVAAVIGSILIWPVLRTRGHYAALVTIAF-GILFKTFLEVNDVLGGPQGLQV 205 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 F + F + + + L + ++ L R+ + + Sbjct: 206 PGMTLFGHAFNDNFTLF----GVEFSFYVNYVLLSLLLFVCVFVLVKALERSWVGLSMDV 261 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 +R ++ A + I+ K+ AF + + F G+AG+ + ++P+ F F+++++++SI Sbjct: 262 VRTDETAASTFGLHIVRWKVIAFTLGNLFAGVAGSIYGMMVGFVAPNNFTFADSLLLLSI 321 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 ILGG+ ++ + A I++ + E + Y L + ++ Sbjct: 322 TILGGLGNVIGLIPAAIIVLMLPEKLQFIQEY---------------RVLLYAALVIAIL 366 Query: 333 LMRSHSLLRLRTPSNFLER 351 L R LL +T F R Sbjct: 367 LFRPDGLLPRKTRLFFSRR 385 >gi|332995569|gb|AEF05624.1| branched-chain amino acid ABC transporter permease [Alteromonas sp. SN2] Length = 392 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 100/348 (28%), Gaps = 33/348 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 L V + L+F Y S+ + L Y + A + +V G G+LSL Sbjct: 26 FLSTAYVTFCNLVFADGALLHVSDYTVSLFGKYLCYALLALAVDLVWGYCGVLSLGHGAF 85 Query: 74 YAIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + +G Y+ + W IP S + ++ + L Sbjct: 86 FTLGGYAMGMYLMRQIGDRGVYGNPDLPDFMVFLNWTEIPWYWAGSSSAIWMVVMVFLGP 145 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG---TTVRSLIRFFRFPS 174 TL + + A + R + F F Sbjct: 146 GLLAFIFGTLAFRSRVSGVYLSIMTQAMTYALMLAFFRNEMGFGGNNGLTDFKEIFGFSL 205 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 ++ ++ + +I ++ + + RD + + K+ Sbjct: 206 QNPSTKLGLFVATAIALAIGYAISHFIVSSKMGRVITATRDAESRVRFVGYKPEHYKVWI 265 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F VS+ G+AGA + I+P F +I ++ V +GG +L ++ Sbjct: 266 FVVSAMLAGLAGALYVPQVGIINPGEFSPLNSIEMVVWVAIGGRCTLYGAIIGAIVVSYA 325 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F + LV L+ + L Sbjct: 326 KT--------------RFTAIMPEAWLFALGGLFVLVTLLLPKGIAGL 359 >gi|206561445|ref|YP_002232210.1| putative branched-chain amino acid transporter permease [Burkholderia cenocepacia J2315] gi|198037487|emb|CAR53423.1| putative branched-chain amino acid transport system, permease component [Burkholderia cenocepacia J2315] Length = 539 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 77/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ + Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPGAFDWYPLVAVPVSFAVAALVGIV 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 383 ILPYNRLAILAFALAVVVVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L + Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLASKA 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + + S Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538 >gi|300689809|ref|YP_003750804.1| branched-chain amino acid transport system permease, membrane component (livM) [Ralstonia solanacearum PSI07] gi|299076869|emb|CBJ49482.1| putative Branched-chain amino acid transport system permease, membrane component (livM) [Ralstonia solanacearum PSI07] Length = 328 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 62/325 (19%), Positives = 131/325 (40%), Gaps = 16/325 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++Y LLL + A + Y + ++L +V+FA ++++G GLLS + Sbjct: 9 FILYGLLLVALIAAPLAGAYPVFVA-KLLCFVLFASAFNLLLGYTGLLSFGHAAFFGGAG 67 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y L L+ L + G+++GL +++ +G Y A+ TL ++++F + Sbjct: 68 YVAGYLMRDLHLTPELGLIAGTAAGALIGLVVGLLAIRRQGIYFAMITLALAQMFYFFCL 127 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + T G+ G+ R + ++ +YYV+L + + +I Sbjct: 128 QAP-FTGGEDGLQGVPR-------------GKLLGVLDLSSDLTLYYVVLAIVAAAFLLI 173 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + + I++N+ SL KL AF +S+A G+AGA + Sbjct: 174 VRTIHSPFGQILKAIKENEPRAISLGYDTDRFKLLAFVLSAALSGLAGALKTLVLGFETL 233 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FN 317 ++ + VI + ++GG+ LS A++I + + + + + Sbjct: 234 TDVHWAMSGSVILMTLVGGLGILSGPILGAALVIALENKLGDIGTFLAGATGVDGFNVLG 293 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 TT+ + +L ++ Sbjct: 294 ESVTTVTGAIFVICVLTFRRGIMGE 318 >gi|116255093|ref|YP_770927.1| putative branched chain amino acid ABC transporter permease component [Rhizobium leguminosarum bv. viciae 3841] gi|115259741|emb|CAK02827.1| putative branched chain amino acid ABC transporter permease component [Rhizobium leguminosarum bv. viciae 3841] Length = 330 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 134/334 (40%), Gaps = 31/334 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + I L + +L L +Y +G IL YV+ A +I+ G G ++ Sbjct: 2 RNNSIPFWLLALALPVLAFILPKLGLNEYYLYVGYVILQYVVLATAWNILGGYAGYVNFG 61 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + +GAY+ ++L +G + + I +A++ G+ GL +L+ +G + +IAT+ Sbjct: 62 TGAFFGLGAYTALVLMKAFGAPLPIQIAGAAIVGALLGIGAGLLTLRLKGIFFSIATIAA 121 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + + ++ W+ + + P F Y + +V+ Sbjct: 122 AIVIETFILNWRFVGGATGMQIIRPE----------------VPLGFDTYTRLLLFVMTV 165 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ + ++ R+ + +RD + A + +L A A+S A + AGA F Sbjct: 166 LTVIAIIVARYIERSWLGRGLHAVRDAEAAAECSGVPTLRLRLIACAISGALMAAAGAPF 225 Query: 250 AASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + P F + +++ +S+ ++GGM+ ++ +L Sbjct: 226 PLYTSFVEPSSTFSLNYSVMALSMAVVGGMSRWWGPVLGAILIASSQQLAAS-------- 277 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + H ++ + + + ++M L+ L Sbjct: 278 ------ASPELHLLVVGLLMVIFVIMAPEGLVGL 305 >gi|27375306|ref|NP_766835.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27348442|dbj|BAC45460.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 361 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 106/309 (34%), Gaps = 12/309 (3%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 +L+ L Q Y+ +++I +FA +V G G++S + + Y Sbjct: 43 VVLVAALLAPLVLQDYLTVFATRVIILALFALSFDLVWGYAGIMSFGQALFFGSAGYGVA 102 Query: 83 ILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L + +I+L++P +I +++G L R I + + + Sbjct: 103 LLARDLDITNIFLVLPAGTIIGLTFALLLGGFLLLGRHPSSVIFVSLGTLTGSYAADRLA 162 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 G + + F YY++LG+ + + +L Sbjct: 163 RGWYYLGGQNGIPSIAPMTLGGYEFSEGPAF-----------YYLVLGILVVVYLLCRFL 211 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ A +R+N++ K F + G+AG+ +A + P+M Sbjct: 212 VRSQFGLALAGLRENEQRIAFFGYKAQHLKAIIFTIGGGVAGLAGSLYAFHEGFVWPNMV 271 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + V+ V+ GG +L I+ GV + +L + Sbjct: 272 GVVVSTQVVLYVLFGGSGTLIGAVIGAIIVEGVSFWLSDNYRDIWPIILGLLLLLVILFR 331 Query: 322 TLMVIALFL 330 L +I+ L Sbjct: 332 PLGLISFVL 340 >gi|332285890|ref|YP_004417801.1| ABC transporter permease protein [Pusillimonas sp. T7-7] gi|330429843|gb|AEC21177.1| ABC transporter permease protein [Pusillimonas sp. T7-7] Length = 327 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 124/302 (41%), Gaps = 13/302 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + +L+ + + + I++ + +FA L+I++G G++S + + Sbjct: 11 VGIALVAILILAAIPLLTPSRLVTDFVIRLAAFGVFATSLNILIGYGGMVSFGHAMFFGG 70 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY++ +L + G+SI L + + + +++G ++ + Y + TL + + +I Sbjct: 71 GAYAFGLLMQKAGVSIPLALLGAMVFCALLALVVGAICVRLKEIYFSFLTLAFAMLLYSI 130 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + W +T G G + I F + +Y+ + + Sbjct: 131 IQSWMSLTGGDQG-------------LMGGIPRPVFMGIDLSNGQHLYWFACFLAVVCLL 177 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ L ++ R +RDN + L + +L AF ++ AF G+AG+ A Sbjct: 178 LMRLLMQSPFGYTLRMVRDNPERARFLGVDVWRTRLYAFVLAGAFAGVAGSIMALFVSAA 237 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ ++ + I +++LGG+ A+L+ ++ + +L F Sbjct: 238 YPEFAYWTMSGEAIFMILLGGLHVYIGPVVGAALLMMFNDVITRYTDLHGLALGIIVLIF 297 Query: 317 NM 318 + Sbjct: 298 AL 299 >gi|257484519|ref|ZP_05638560.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|320324361|gb|EFW80440.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|330988868|gb|EGH86971.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008180|gb|EGH88237.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 355 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 16/328 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + F+ + + + ++ I L+ + GL+++ G G LSL A+ Sbjct: 27 IGLWSLLVFAFIAVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ + G+ + L + ++S ++ GLPSL+ +G YL ++TL + + Sbjct: 87 GAFAAYNLQLRVPGMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L ++ TN A + Y + LG+ L Sbjct: 147 VLTRFSWFTNDNASGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLF 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + L R + W +RD A + + AKL AFA+S ++G+AG+ +A A Sbjct: 194 WLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F + + ++ I+I+GG+ S+ A ++ L ++ L+ Sbjct: 254 TVEPHGFDLNRSFQILFIIIIGGLGSVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQ 313 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 N++ L + ++ L RL Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARL 340 >gi|228990981|ref|ZP_04150944.1| Branched chain amino acid ABC transporter, permease [Bacillus pseudomycoides DSM 12442] gi|228768761|gb|EEM17361.1| Branched chain amino acid ABC transporter, permease [Bacillus pseudomycoides DSM 12442] Length = 333 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 120/325 (36%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L+ + + + Q+ I+ +FA I++G G++S + + IGAY Sbjct: 14 LVVLICLSVFPFVNDSRSLLILFTQVFIFAIFAMSFDILLGYTGIVSFGHCMFFGIGAYC 73 Query: 81 YVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + S + I ++ ++S I+G+ SL+ + + A+ TL +S++F + Sbjct: 74 VALLLDRQEVSIASFLIGIGIAVVLSTIISYIIGMLSLRLKSHFYAMLTLAISQLFFVLA 133 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ T+G G F YY+ L + + Sbjct: 134 EKWRSFTHGGDGFTFRVPDMFRDRF-------------------TFYYITLICLVVIFLL 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L I+ K+ A V+ ++G F + ++ Sbjct: 175 LRLFTQSSIGKVLKAISQNEQRVEALGYKILHYKIIASIVAGVVAALSGGLFVITLRFVN 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L I+ + + Sbjct: 235 TTVFSIEMTLNALLMTMIGGVGTLVGAIAGAGIIEFLKYYLSELAA---------QYPIF 285 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T + + +V+L L Sbjct: 286 ERWTIFLGLLYIIVLLGFPTGLTGT 310 >gi|241766833|ref|ZP_04764652.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241362755|gb|EER58542.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 355 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 123/336 (36%), Gaps = 11/336 (3%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + +V L F S+ ++L++V+ +++G G++S + + Sbjct: 15 LLAVILVAIFLGLAFAPFLFPGVKALSVAAKVLVFVVLVASFDLLLGYTGIVSFAHTMFF 74 Query: 75 AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IGAY + +R ++ + + + ++S + +GL SL+ R + A+ TL ++ Sbjct: 75 GIGAYGIAVATTRMGPTWGALAVGLSGALVLSLLLSLAVGLFSLRVRAIFFAMITLAVAA 134 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 FQ + + IT G+ G+ + F + YY+L Sbjct: 135 AFQTLASQLSDITGGEDGLTFKVPEILSPSFEPFDDPFLGVSIDG---RLICYYLLFVTA 191 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 +L + + + IR+N+ ++ ++ + ++ +S+ F AGA A Sbjct: 192 VALVLALLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTTSSVLSALFACCAGAMLAI 251 Query: 252 SRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYF 306 F + + IV++GGM ++ A + + + +L + Sbjct: 252 WLRYNGPDTSLSFEIMMDCLLIVVIGGMGTIYGSAIGAVLFLVAQSYLQDLLRVGSEATA 311 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 R + + L + ++ Sbjct: 312 GLPWLSALLSPDRWLLWLGVLFVLSVYYFPTGVVGR 347 >gi|257058240|ref|YP_003136128.1| inner-membrane translocator [Cyanothece sp. PCC 8802] gi|256588406|gb|ACU99292.1| inner-membrane translocator [Cyanothece sp. PCC 8802] Length = 377 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 67/374 (17%), Positives = 132/374 (35%), Gaps = 63/374 (16%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 YI + +Y +FA GL++ G GL++ V +GAY+ +L + I + Sbjct: 8 SGYIVFLATSAGLYAIFALGLNLQWGFTGLINFGVVAFMTMGAYTTALLTLKG-TPIIIA 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + A++S G+ +GL +L+ R DYLAI T+ +SE+ + I + +T G G+ Sbjct: 67 VLIGAILSAILGLGIGLSTLRLREDYLAIVTIGVSELIRLIANNEEWLTGGTFGVRSYSL 126 Query: 156 L-----------------------------------YFLGTTVRSLIRFFRFPSSFVIYE 180 + ++ R P S + + Sbjct: 127 PLDIEPNFLIKFLLIIVLTFLAIYAEWVLCRSLSEQWRQHKQIQGKSYQPRKPISLITWG 186 Query: 181 IFMYYVLLGMCFLSASIILWLR------------------------RTAISNAWRTIRDN 216 I ++L + + + + IR++ Sbjct: 187 IIGTILILLVYIPGIVALSNYTYKAGLMVLILAVLAIIYAGLEFLVHSPWGRILKAIRED 246 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L ++ KL +F + A G+AG+FFA I P F+ IV+LG Sbjct: 247 EDVAKALGKNVLLYKLQSFMLGGAIAGIAGSFFAWQLTTIYPKSFEPLLTFNAWIIVVLG 306 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G S + I + + Y+ + ++ + L ++++ R Sbjct: 307 GAGSNAGTLLGAIIFWSYDSITRFLLPYFG---IFDQSQAAAFRVMIIGLILMVLMVWRP 363 Query: 337 HSLLRLRTPSNFLE 350 +L + + Sbjct: 364 QGILGKKEELTLGK 377 >gi|55820453|ref|YP_138895.1| branched-chain amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55822337|ref|YP_140778.1| branched-chain amino acid ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|55736438|gb|AAV60080.1| branched-chain amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55738322|gb|AAV61963.1| branched-chain amino acid ABC transporter permease protein [Streptococcus thermophilus CNRZ1066] gi|312277763|gb|ADQ62420.1| Branched-chain amino acid ABC transporter permease protein [Streptococcus thermophilus ND03] Length = 294 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y IGA+ + ++ W+ + Sbjct: 10 LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMIGAFVGYYAINSLKMNFWIALVF 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G+++ + + + I+ LI + L G Sbjct: 70 SMIVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVYFVGADTRS------- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ + + +L+ L ++ L +++T + A R + + Sbjct: 123 ----FPQSIKVHTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + ++ FA+ S+ G AG + I P M + I +LGG+ Sbjct: 179 AAELMGISVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L + + ++ L +++L+R Sbjct: 238 GIIPGAALGGFVIGILETLSTAIG-------------LSSYRDAIVYGVLIVILLLRPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|332525001|ref|ZP_08401185.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] gi|332108294|gb|EGJ09518.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] Length = 523 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 90/291 (30%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + + Sbjct: 249 ITYGLMGVINMAHGELIMIGAYATYVVQGLFRTWLPGAFDWYVVAAIPVAFLASALVGAV 308 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 ++ + + +L W + +G + + + Sbjct: 309 LER--SVIRFLYGRPLETLLATWGISLILMQTVRSIFGAQNVGVENPAWLSGGVQLLPNL 366 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + +++ + A + L + +T + R + N++ + AF++ Sbjct: 367 VLPYNRLAIIVFAGLVLAGVALLIGKTRLGLFVRGVTQNRRMAACVGVDTARIDTYAFSL 426 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+AG A S+ + +V+LGG+ L+ A L + +L Sbjct: 427 GAGIAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVYAGLGLGVLNKL 484 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 G +++ + + I R + L+ S Sbjct: 485 LEGWQGAVLAK-------------ITVLVFIVVFIQKRPQGIFALKGRSAE 522 >gi|325529159|gb|EGD06136.1| leucine/isoleucine/valine transporter permease subunit [Burkholderia sp. TJI49] Length = 215 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 24/228 (10%) Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFM 183 + + +T G GI + G + + S IF+ Sbjct: 3 IRLLANNLTSLTGGPDGISGIPKPTVFGYEMARSASVDGAKTFHELIGLEYSGDHVVIFL 62 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y + L + + + L R + AW +RD++ A SL KLSAF + +AF G Sbjct: 63 YLLALVLVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAG 122 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 + GAFFAA + ++P+ F F E+ ++++IV+LGGM S + A +L + E+ G Sbjct: 123 IGGAFFAARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAE 182 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 Y + + + L+++ R LL P L + Sbjct: 183 Y---------------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 215 >gi|325962599|ref|YP_004240505.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323468686|gb|ADX72371.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 430 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 98/338 (28%), Gaps = 24/338 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 ++ + + A +++ + + L+ + + GLS++ G+ GL + Sbjct: 115 FSQTSNLSVIFAFGKGIVVQQQDFGQNLLNRLVAGLSFGLLLALASVGLSLIFGTTGLTN 174 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +GA + +I R + + Sbjct: 175 FAHGEMVTLGAVLVFAFNAIGLPFWLAIILSLLGGGLFGYAQDRGLWRPLRRRGTGLVPM 234 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ I + +++ + T + V + L Sbjct: 235 MIVSIGLALAVRYV-----------IQFYFGGATQQLPYAQSPEIQLGPVSISPNNLWSL 283 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + A I + L +T + A R + DN + + + + G Sbjct: 284 GISAVVIALIGIVLLKTRLGKATRAVADNPALAAASGIDVDGVIRLVWITGGMLAALGGI 343 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A R ++ DM +++ + V LGG+ ++ + I+ VEL Sbjct: 344 LWAYYRPGVTFDMGSAIL-LLIFAGVTLGGLGTVFGALIGSIIVGIFVELTTVFGLA--- 399 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + +V+L R +L R Sbjct: 400 ---------ADLKYVGALFIMIVVLLFRPQGILGRRER 428 >gi|186475356|ref|YP_001856826.1| inner-membrane translocator [Burkholderia phymatum STM815] gi|184191815|gb|ACC69780.1| inner-membrane translocator [Burkholderia phymatum STM815] Length = 316 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 100/310 (32%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ +GA + Sbjct: 8 VINGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + ++ +I+ ++G + L A + I + Sbjct: 68 PTLCIALVIAAIVCAVVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ M F + + Sbjct: 188 AENPGVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L IL + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|260888351|ref|ZP_05899614.1| amino acid ABC transporter, permease protein LivH [Selenomonas sputigena ATCC 35185] gi|260861887|gb|EEX76387.1| amino acid ABC transporter, permease protein LivH [Selenomonas sputigena ATCC 35185] Length = 314 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 93/303 (30%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GAY + GL I + + Sbjct: 30 LINGVSLGSIYALIALGYTMVYGIIKLINFAHGDIYMVGAYLGFFAVTNLGLPIVPALIL 89 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+G G+++ + K I+ LI + L Sbjct: 90 AMIITGLLGIVIEKLAYKPLRHAPRISALISAIGVSLFLEYAMMYFVSPTPRTFPPLF-- 147 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F ++ +L CFL + ++ T I A R + + Sbjct: 148 ---------QDVAFSVGSLVINGQQMLILGITCFLMVVLTYIVQYTKIGKAMRAASYDTE 198 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + S+ +AG + I P M I +LGG+ Sbjct: 199 TAQLMGINADRVISFTFWIGSSLAAVAGVLVGVYYNSIDPLM-GIMPGIKAFVAAVLGGI 257 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L IL V G F F L LV+L + Sbjct: 258 GILPGAVAGGLILGIVEAFVSGFVSSTFRDAAAF-------------AILILVLLFKPAG 304 Query: 339 LLR 341 L Sbjct: 305 LFG 307 >gi|170692050|ref|ZP_02883214.1| urea ABC transporter, permease protein UrtC [Burkholderia graminis C4D1M] gi|170143334|gb|EDT11498.1| urea ABC transporter, permease protein UrtC [Burkholderia graminis C4D1M] Length = 398 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 101/349 (28%), Gaps = 32/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I+ L V + L+ Y ++ + + Y + A L +V G G+LSL Sbjct: 53 LIIVFGLGVPFATLVVPETSPLHLSAYAMTITGKFMCYAIAALALDLVWGYCGILSLGHA 112 Query: 72 IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113 + +A+G Y+ + G +++ L Sbjct: 113 LFFALGGYAIGMYLMRAIGHDGKYGSDLPDFMVFLDWHQLPWYWEGTQHLGYALLLVVLV 172 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 + + +I Y + + R F Sbjct: 173 PAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIGGFA 232 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + + + L+ + + + +RD + L + + KL Sbjct: 233 ITHPGTRTALLLITFAVLILAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 292 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 293 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNG 352 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F +F + + LV L+ + ++ L Sbjct: 353 AKSF--------------FTANFPEYWLFFLGLIFVLVPLLLPNGIMGL 387 >gi|195970131|ref|NP_387082.2| ABC transporter permease [Sinorhizobium meliloti 1021] gi|187904217|emb|CAC47555.2| Putative methionine ABC transporter, permease component [Sinorhizobium meliloti 1021] Length = 333 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 130/345 (37%), Gaps = 33/345 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + I+ + + L L + ++IL + +FA ++++G GLL Sbjct: 13 RKERSPAIVQTVFLGVGLACLLLAPLFFYPVF----LMKILCFALFACAFNLLLGYTGLL 68 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S + AY +G+ L I + + + G ++G +++ +G Y A+ T Sbjct: 69 SFGHAAFFGGAAYFTAHAVKEWGVPPELGILLGVVGAALLGAVVGFFAIRRQGIYFAMIT 128 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++++F ++ ++S+ R + MYY Sbjct: 129 LALAQMFYFFCLQAGFTRG--------------EDGIQSVPRGHLLGFIDLSQPTNMYYF 174 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + + ++I + + ++IR+N+ SL ++ KL+AF +S+A G+AG Sbjct: 175 VLAVFVIGIAMIWRIINSPFGMILKSIRENETRAISLGYSVRNYKLAAFVMSAALTGLAG 234 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A + + + VI + +LGG+ +L +++ + F Sbjct: 235 GLKALVFQFATLTDVSWQMSGEVILMTLLGGIGTLIGPLFGAGLVVTLQNYLATSEFPV- 293 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + I + +L+ ++ S R Sbjct: 294 --------------TIITGIVFMVCVLLFRRGIVGEFYNSRLGRR 324 >gi|152994981|ref|YP_001339816.1| inner-membrane translocator [Marinomonas sp. MWYL1] gi|150835905|gb|ABR69881.1| inner-membrane translocator [Marinomonas sp. MWYL1] Length = 377 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 95/346 (27%), Gaps = 33/346 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + LL Y ++ + L Y M A + I+ G G+LSL +A Sbjct: 28 VTILASAANLLLPADSVFYVSTYTITLLGKYLCYAMLALAVDIIWGYCGILSLGHGAFFA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +G Y+ + R + LP D A L+ I Sbjct: 88 LGGYAMGMYLMRQIGDRGVYGNPILPDFMVFLDWKELPWFWLGMDQFWFAMLMAVFIPGL 147 Query: 136 ILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSF 176 + + + + + + + F Sbjct: 148 LAFVFGWLAFRSRVTGVYLSIMTQALTYALLLAFFRNEMGFGGNNGLTDFKEILGFSLQA 207 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 + ++ + + + I + + IRD++ + K+ F Sbjct: 208 DSTRVALFLITAILLAVIFVISQKILSSRFGKVVLAIRDSESRSRFIGYRTDRYKVWLFV 267 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 S+ G+AGA + I+P F +I ++ V +GG +L ++ Sbjct: 268 YSAVIAGIAGALYVPQVGIINPGEFSPINSIEMVIWVAVGGRGTLIGAVIGALLVNYAKT 327 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F + LV L L+ L Sbjct: 328 --------------RFTAIMPDAWLFALGAMFVLVTLYLPKGLMGL 359 >gi|254441843|ref|ZP_05055336.1| amino acid or sugar ABC transport system, permease protein [Octadecabacter antarcticus 307] gi|198251921|gb|EDY76236.1| amino acid or sugar ABC transport system, permease protein [Octadecabacter antarcticus 307] Length = 630 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 94/311 (30%), Gaps = 26/311 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ I + + Sbjct: 341 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGFVVQQIVPDYTLSIIIAL 400 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + ++ A G+ M + + + TL+ + +L + G + Sbjct: 401 PTAFAVTFAAGVAMERLVI-RHLYHRPLETLLATFGIAIVLQQLAKNIFGTQARPLTSP- 458 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + + I+ L+RT + R + N Sbjct: 459 --------DWLAGAWVVNDVIQISTIRIAIFALALLFLGLILYILKRTRLGLEVRAVTQN 510 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 S+ + F + S G+AG S + Sbjct: 511 PGMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLYAKVTSEMGADYIVQ---------- 560 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 S + + + + + F+ S + T M++ + L I R Sbjct: 561 ---SFMTVVVGGVGNVWGTLAGASLIGFTQKGIEFFNPSNTLAAQTYMILFVILFIQFRP 617 Query: 337 HSLLRLRTPSN 347 ++ L+ + Sbjct: 618 KGIVALKGRAA 628 >gi|315651970|ref|ZP_07904972.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] gi|315485799|gb|EFU76179.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] Length = 293 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 102/306 (33%), Gaps = 25/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +++ +GAY+ S GL + + + + Sbjct: 9 LINGLRTGSIYALIAIGYTMVYGIAKMINFAHGDIIMVGAYALYFSISVLGLPVPIALLI 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I G G+++ + K +A LI + L + G Sbjct: 69 TVIICGVLGVMIEKVAYKPLRSAPPLAVLITAIGMSFFLQSASLLIFGST---------- 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +S+I V+ L+ + L++ +T + +A R + +++ Sbjct: 119 -PIPFQSVIPNVNISIGPVVISSITVVTLIVTAIAMILLTLFVNKTKLGSAMRAVSEDKG 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA +AG + + I +LGG+ Sbjct: 178 AAELMGINVNSTISMTFAIGSALAAVAGVLYICQYQSM-KPTLGALPGIKAFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + + + F L +V+L R Sbjct: 237 GSIPGAMIGGILLGLIESVSKAYISTELADAIVFG-------------VLIVVLLFRPSG 283 Query: 339 LLRLRT 344 LL + Sbjct: 284 LLGKKK 289 >gi|300314069|ref|YP_003778161.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076854|gb|ADJ66253.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 326 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 121/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS Y +GL L + + + Sbjct: 25 FLMKMLCFALFACAFNLLIGYTGLLSFGHAAFLGWAGYMCGQALKVWGLPTELGLIIGTL 84 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 G++MGL +++ +G Y + TL ++++ + ++ T G+ G+ R Sbjct: 85 TGALIGLVMGLLAIRRQGIYFTMITLALAQMLFFVALQAP-FTGGEDGLQGVPR------ 137 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + ++ +YYV+L + ++I+ + + I++N+ Sbjct: 138 -------GKLLGFLNLESDMTLYYVVLAIAVAGFALIVRTIHSPFGQVLKAIKENEPRAI 190 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+ G+AGA + +S + +V+ + ++GG+ ++ Sbjct: 191 SLGYDVARYKLLAFVLSAGLSGLAGATKTLVLGFETLTDVHWSMSGLVVLMTLVGGLGTI 250 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 I+I + + + + + + + T + + +L ++ Sbjct: 251 LGPIVGAVIIIMLENKLGDIGAWLASVTHIDWFNTLGDSVTIVTGFIFIVCVLAFRKGIV 310 Query: 341 RL 342 Sbjct: 311 GE 312 >gi|33600490|ref|NP_888050.1| ABC transporter permease [Bordetella bronchiseptica RB50] gi|33568089|emb|CAE32002.1| Putative ABC transport system, permease protein [Bordetella bronchiseptica RB50] Length = 299 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 16/305 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ ++ I +LIY++ A GL++ G GL++ V YAIGAY+ +L + + I Sbjct: 4 AYLIAIFITVLIYMLLAGGLALQYGFTGLINFGHVGFYAIGAYTSALLSLQGVP-LVACI 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++SG +G+ +L+ RGDYLAI TL SE + IL K + +T G GI RL Sbjct: 63 LAATLVSGLSAYPLGVIALRLRGDYLAIVTLGFSESVRMILQKEEWLTRGVHGIPGIPRL 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + +S + ++ + LL L I + + + IRDN Sbjct: 123 F-------------GQYASGAMVDVLILATLLLTNILVFLGIRKIIGSPFGRTIKAIRDN 169 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A +L + K + + +A G+AGAF A I+P+ F V +I+G Sbjct: 170 EVAVMALGKNPAWFKTRSLMIGAALAGLAGAFTAHYLTFIAPEQFVPLITFYVWIAIIVG 229 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL + T IL+ +E + + F + + ++ + L L IL R Sbjct: 230 GVGSLKGVVAGTVILMVFLEGSRFVREFLFFDISE--VQMASLRFFIIGVGLILCILYRP 287 Query: 337 HSLLR 341 + + Sbjct: 288 NGIFG 292 >gi|33602765|ref|NP_890325.1| putative branched-chain amino acid transport permease [Bordetella bronchiseptica RB50] gi|33577207|emb|CAE35764.1| putative branched-chain amino acid transport permease [Bordetella bronchiseptica RB50] Length = 326 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 132/336 (39%), Gaps = 23/336 (6%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +N+ A++ +L ++ + ++++ Y +FA ++++G GLLS Sbjct: 1 MNRQLLGYAAFAIIVGILPYVGVYPIF--------AMKVMCYALFACAFNLLLGYTGLLS 52 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AY+ +GL L + ++ G+ MG +++ G Y A+ TL Sbjct: 53 FGHAAFLGSAAYAAGHALKVWGLPTELGLAFGVAVAALLGLAMGALAIRRSGIYFAMITL 112 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++++ ++ T G+ G+ R + + ++ +YYV+ Sbjct: 113 ALAQMVFFFFLQA-HFTGGEDGLQGVPRGT-------------LLGTIDLRNDLNLYYVV 158 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 +G+ L +I + + +R+N+ SL + KL AF +S+A G+AGA Sbjct: 159 MGIFALGYFVIWRTVHSPFGQVLKGLRENEPRAISLGYDVDRFKLVAFVLSAAIAGLAGA 218 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + + +VI + ++GG+ +L+ I++ + Sbjct: 219 TKTLVFVSATLSDATWQMSGLVILMTLIGGLGTLTGPILGAFIVVLLENKVGDFGQMLTR 278 Query: 308 -SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L + T ++ + + ++ ++ Sbjct: 279 LTGLDWFLRLGESVTIVIGLIFVVCVMAFRRGIVGE 314 >gi|33594442|ref|NP_882086.1| putative branched-chain amino acid transport permease [Bordetella pertussis Tohama I] gi|33564517|emb|CAE43832.1| putative branched-chain amino acid transport permease [Bordetella pertussis Tohama I] gi|332383853|gb|AEE68700.1| putative branched-chain amino acid transport permease [Bordetella pertussis CS] Length = 325 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 131/336 (38%), Gaps = 24/336 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +N+ A+V +L ++ + ++++ Y +FA ++++G GLLS Sbjct: 1 MNRQLLGYAAFAIVVGILPYVGVYPIF--------AMKVMCYALFACAFNLLLGYTGLLS 52 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AY+ +GL L + ++ G+ MG +++ G Y A+ TL Sbjct: 53 FGHAAFLGSAAYAAGHALKVWGLPTELGLAFGVAVAALLGLAMGALAIRRSGIYFAMITL 112 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++++ L T G+ G+ R + + ++ +YYV+ Sbjct: 113 ALAQMVFFFLQ--AHFTGGEDGLQGVPRGT-------------LLGTIDLRNDLNLYYVV 157 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 +G+ L +I + + +R+N+ SL + KL AF +S+A G+AGA Sbjct: 158 MGIFALGYFVIWRTVHSPFGQVLKGLRENEPRAISLGYDVDRFKLVAFVLSAAIAGLAGA 217 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + + +VI + ++GG+ +L+ I++ + Sbjct: 218 TKTLVFVSATLSDATWQMSGLVILMTLIGGLGTLTGPILGAFIVVLLENKVGDFGQMLTR 277 Query: 308 -SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L + T ++ + + ++ ++ Sbjct: 278 LTGLDWFLRLGESVTIVIGLIFVVCVMAFRRGIVGE 313 >gi|325526280|gb|EGD03893.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia sp. TJI49] Length = 394 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 105/347 (30%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++G +++ Y + A L +V G G+LSL + Sbjct: 51 VAIGIGVPLAALVAPESSAFHLSAYAMTLGGKLMCYAIAALALDLVWGYCGILSLGHGLF 110 Query: 74 YAIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +A+G Y+ + R + + + G +L A Sbjct: 111 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTQHLAVALLLVVVVPA 170 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSS 175 + + +K ++ + A L F R FP + Sbjct: 171 VLAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPIT 230 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ + L+ + + + +RD + L + + KL + Sbjct: 231 SPGTRTVLFLLTFATLVLAFVAARAIVASKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 290 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 S+ G+AGA + I+P +I + V +GG +L + G Sbjct: 291 TASAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 350 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 351 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIVGL 383 >gi|187477585|ref|YP_785609.1| ABC transporter permease [Bordetella avium 197N] gi|115422171|emb|CAJ48695.1| ABC transporter, permease protein [Bordetella avium 197N] Length = 327 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 128/333 (38%), Gaps = 15/333 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ + +GA ++++ Y +FA ++++G GLLS AY Sbjct: 5 LLGYAAAVIVVGALPFLGVYPIFVMKVMCYALFACAFNLLLGYTGLLSFGHAAFLGSAAY 64 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +G L + +++ G+ MG +++ G Y A+ TL ++++ ++ Sbjct: 65 ATGQALKVWGWPTELGLLFGVVVAALLGLAMGALAIRRSGIYFAMITLALAQMVFFFFLQ 124 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G+ G+ R + +I +YY+++ + + II Sbjct: 125 A-KFTGGEDGLQGVPR-------------GKALGFIDLSQDINLYYLVMVLFIIGYFIIW 170 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + +R+N+ SL KL AF +S+A G+AG+ + Sbjct: 171 RTVHSPFGQVLKGLRENEPRAISLGYDTDRFKLLAFVLSAAIAGLAGSAKTLVFVSATLS 230 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318 + + +VI + ++GGM +L+ +++ + + N + + + Sbjct: 231 DATWQMSGLVILMTLVGGMGTLTGPIIGAFVVVLLENKVGDFGQFMANLTGMDWFLRLGE 290 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T ++ + + ++ L+ + R Sbjct: 291 SVTIVIGLIFVICVMAFRRGLVGEFSAWLERRR 323 >gi|307315823|ref|ZP_07595334.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] gi|307322579|ref|ZP_07601920.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|306891770|gb|EFN22615.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|306898532|gb|EFN29208.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] Length = 330 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 130/345 (37%), Gaps = 33/345 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + I+ + + L L + ++IL + +FA ++++G GLL Sbjct: 10 RKERSPAIVQTVFLGVGLACLLLAPLFFYPVF----LMKILCFALFACAFNLLLGYTGLL 65 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S + AY +G+ L I + + + G ++G +++ +G Y A+ T Sbjct: 66 SFGHAAFFGGAAYFTAHAVKEWGVPPELGILLGVVGAALLGAVVGFFAIRRQGIYFAMIT 125 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++++F ++ ++S+ R + MYY Sbjct: 126 LALAQMFYFFCLQAGFTRG--------------EDGIQSVPRGHLLGFIDLSQPTNMYYF 171 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + + ++I + + ++IR+N+ SL ++ KL+AF +S+A G+AG Sbjct: 172 VLAVFVIGIAMIWRIINSPFGMILKSIRENETRAISLGYSVRNYKLAAFVMSAALTGLAG 231 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A + + + VI + +LGG+ +L +++ + F Sbjct: 232 GLKALVFQFATLTDVSWQMSGEVILMTLLGGIGTLIGPLFGAGLVVTLQNYLATSEFPV- 290 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + I + +L+ ++ S R Sbjct: 291 --------------TIITGIVFMVCVLLFRRGIVGEFYNSRLGRR 321 >gi|261753388|ref|ZP_05997097.1| high-affinity branched-chain amino acid transport system permease [Brucella suis bv. 3 str. 686] gi|261743141|gb|EEY31067.1| high-affinity branched-chain amino acid transport system permease [Brucella suis bv. 3 str. 686] Length = 588 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 102/251 (40%), Gaps = 25/251 (9%) Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 W + + A I+ GM++ P + +G + ++A++ E+F+ + + + +T G G+ Sbjct: 74 PWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLALHFGWLTGGATGLM 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + +L ++ R ++ GM ++ +I +RR+ + Sbjct: 134 IQLKLGWVWIVFRERW--------------PSLLIVFGMLLVTLAITWAVRRSRLGFYLV 179 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVI 270 R+ + A + + +L A A+SSA M G F A I P MF + +I + Sbjct: 180 ATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIEPAAMFSLAFSIQIA 239 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++GG+ +++ +L+ + E L F + + L L Sbjct: 240 MFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF----------VYGLVLIL 289 Query: 331 VILMRSHSLLR 341 V+L + ++ Sbjct: 290 VVLFMPNGIMG 300 >gi|146339294|ref|YP_001204342.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146192100|emb|CAL76105.1| putative ABC transporter permease protein [Bradyrhizobium sp. ORS278] Length = 353 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 122/336 (36%), Gaps = 19/336 (5%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + + +++ + + IL ++ A +++ G GL+S+ Sbjct: 12 TRTKASIVFAVIAALIVVAGVIAPAYLPRSTLQDLFFILTMLVLAQSWNLLAGYAGLVSV 71 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +GAY+ L + + + + + G + + +G Y AI T + Sbjct: 72 GQQAFVGLGAYAMFAGVVLLKLDPLVSVLLGGAAAALLAIPAGFFAFRLQGAYFAIGTWV 131 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 ++EI + ++ +WK + G +++ +I Y++ L Sbjct: 132 VAEIVRLLVAQWKTLGGGTG--TSLPGAATRAMFGTDVVQRLLGVRPAQAVDIICYWLAL 189 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + + L R+ A ++RDNQ+A ++ K + S+A G+ GA Sbjct: 190 LLAVATIFTVYRLLRSRHGLALASVRDNQEAARAIGVDARRLKAMVYLTSAALTGLVGAL 249 Query: 249 FAASRDRISPDMFK--FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + RISPD VI IV++GG+ ++ I G+ +L Sbjct: 250 IYVQKARISPDAAFSVIDWTAYVIFIVVIGGIGTIEGPIVGVLIFFGLQKLLA------- 302 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + + +++L L L Sbjct: 303 --------DFGSLYLLALGLIGIVIMLFAPQGLWGL 330 >gi|119387721|ref|YP_918755.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119378296|gb|ABL73059.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Paracoccus denitrificans PD1222] Length = 333 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 118/326 (36%), Gaps = 29/326 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + V A+ Q ++ + LI + A L ++ G+ GLLS Y Sbjct: 17 LVGLAVIAATGLCLPFASAGQPFLLMLASHALIAAILALSLDMLTGNTGLLSFGHAAWYG 76 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY +L I +LI ++ + +G ++ G AI TL +S+I Sbjct: 77 FGAYVAGLLSKSVSSDIAVLILLTLAATLLVSGAVGAILVRQVGKTFAILTLALSQIMFA 136 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ + IT G+ G+ F + ++ Y +LLG L+ Sbjct: 137 LVFVFSDITGGEDGLQGIPMATFF--------------GAQIVSPATWYAILLGALLLAL 182 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L +R + AW IR+N + + + KL ++ +S++ +AG F Sbjct: 183 AGALHIRHAPLGRAWLAIRENSERARFIGMNVTLLKLISYMISASLASLAGLLFVLFNGA 242 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 SPD+ + E+ V+ V+LGG+ ++ + + Sbjct: 243 TSPDLLHWLESGKVLMYVVLGGVGTIFGPVIGAVVFTLAEHYVSSFTDAW---------- 292 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 L++++ L Sbjct: 293 -----LIYFGALFVLIVIVAPGGLFG 313 >gi|328955201|ref|YP_004372534.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Coriobacterium glomerans PW2] gi|328455525|gb|AEB06719.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Coriobacterium glomerans PW2] Length = 357 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 141/347 (40%), Gaps = 27/347 (7%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + R D + + VV L A + + + I Y++ A L++VV Sbjct: 1 MRFLNNRRTASDLLTYAIVVVAFALTTAAQAAHMVPRSLAGQLVPISCYIVMAVSLNLVV 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLP 113 G G LSL +IGA++ ++ + + + L + V A + G ++G+P Sbjct: 61 GISGELSLGHAGFMSIGAFTGIMCAAGLARAIPAPEIRLALAMVVGAGFACIAGFLIGIP 120 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD-----RLYFLGTTVRSLIR 168 ++ RGDYLAI TL EI + ++ + + + + L Sbjct: 121 VMRLRGDYLAIVTLAFGEIIKELINCLLVGVDSDGVHVLINVSGTLGVRDLHLAAGGQAI 180 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 + +I + + ++ +I L R+ A +RDN+ A S+ ++ Sbjct: 181 IKGAQGASGTEKIATFAAGFVLVMVALVVIQNLVRSRTGRAIMAVRDNRIAAQSVGISVT 240 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 ++ AF V++A G +GA F + ++S F F+ +I+V+ V+LGG+ S+ A Sbjct: 241 KYRMIAFVVAAALAGASGALFGCNFTQLSASKFGFNTSILVLVFVVLGGLGSMRGSMAAA 300 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 +L + E + Y + L V+++R Sbjct: 301 VVLTVLPEALREFSSY---------------RMLAYAVVLIAVMIIR 332 >gi|257454524|ref|ZP_05619782.1| urea ABC transporter, permease protein UrtC [Enhydrobacter aerosaccus SK60] gi|257448086|gb|EEV23071.1| urea ABC transporter, permease protein UrtC [Enhydrobacter aerosaccus SK60] Length = 379 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 103/341 (30%), Gaps = 27/341 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +L V+ L L A Y ++ +I+ M A L +V G G+LSL + + Sbjct: 21 FAVLMVLPWLHLLPADSALHLSAYWVTLIGKIMCLAMVALALDLVWGYAGILSLGHGLYF 80 Query: 75 AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 A+G Y+ + W +P + M L L Sbjct: 81 ALGGYAMGMYLMRQASGNSLPEFMRFLSWDKMPWFWAGTDNFAWAMILVVLVPALVAFIF 140 Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + +I + + + + + + Sbjct: 141 GFFAFRSKIKDVYFSIITQAMVFAASLLFFRNETGFGGNNGFTGFKTILGMDIAAPMTRT 200 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + + + L+ + +L +RD++ L ++ KLSA+ +S+ Sbjct: 201 LLCFATAFVLMLAYLGLRYLMHKPYGRVLGAVRDSENRLQYLGYRTLWYKLSAWVLSAII 260 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA + I+P +I + V GG +L ++ V Sbjct: 261 AGIAGALYVPQVGIINPSEMNPVNSIEMAVWVATGGRGTLIGAILGAGVVNAVKTY---- 316 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F ++ ++ +V L ++ L Sbjct: 317 ----------FTVAYPEAWLLILGGLFVVVTLFLPKGIIGL 347 >gi|187921065|ref|YP_001890097.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] gi|187719503|gb|ACD20726.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 316 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 105/314 (33%), Gaps = 19/314 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ +GA + + Sbjct: 8 IINGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQDHFPELGHV 67 Query: 94 ----LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + ++A + G + + + +A LI + +L I G+ Sbjct: 68 PTLLIALILAAAVCAMVGYTIEKVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWGRNP 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + L + + + +++ F+ A ++L + RT + A Sbjct: 128 LAFPQLLPTAPLNLIQASENHP----GAVISLTEIAIVVVAFFVMAGLLLLVHRTKLGRA 183 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R I +N + F + F + SA +AG A+ M F + Sbjct: 184 MRAIAENPNVASLMGVNPGFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKA 242 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ +L IL V +L G + + + L Sbjct: 243 FTAAVLGGIGNLGGAMVGGVILGLVEQLGAGYIGTLTGGVFG-----SNYQDVFAFVVLI 297 Query: 330 LVILMRSHSLLRLR 343 V++ R LL R Sbjct: 298 AVLVFRPSGLLGER 311 >gi|121608339|ref|YP_996146.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121552979|gb|ABM57128.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 339 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 111/334 (33%), Gaps = 26/334 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ + + ++ + +LI ++ A L + G G+ +L + G Sbjct: 18 FTAIDAVIAAALVATFFFAELYLALAVSVLIMIILALSLDLAQGYAGIETLGHAAFFGSG 77 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ + + + V A + G + G+ L+ +G + TL + + + Sbjct: 78 AYAAGLYALHISTEPFSGLVVGAAAAAIVGALTGIAVLRTQGLTQIMLTLASATLLLELA 137 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 K +T G G+ LG F I Y + L Sbjct: 138 NVAKKVTMGDDGLTGYSIAPLLGR------------FEFDIQGRTAYVYAAVVLMLVYIF 185 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + + IR+N L + L+ + +S+A G+AGA A + Sbjct: 186 AKYFVNSPLGLTAQGIRENPVRMRMLGVRVYARLLAIYTISAAVAGIAGALSAQVNRIVG 245 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 D F+ + V+ ++ LGG L + + + + ++ Sbjct: 246 LDALGFTLSANVLVMLALGGTGRLYGAFIGAVLFMLLSDRAAAVD--------------P 291 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L L + L+ L F R Sbjct: 292 TNWLAALGVLLILAVRFAPDGLMGLIERFAFKSR 325 >gi|225028597|ref|ZP_03717789.1| hypothetical protein EUBHAL_02876 [Eubacterium hallii DSM 3353] gi|224954079|gb|EEG35288.1| hypothetical protein EUBHAL_02876 [Eubacterium hallii DSM 3353] Length = 297 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 102/305 (33%), Gaps = 23/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + IY + A G ++V G +L+ IG Y +L + L+ + I Sbjct: 9 SYLINGVSLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMIGCYIVFVLMGSFHLNSTVSI 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G+++ + K +A LI + L + I G + Sbjct: 69 IAAVIGCTVLGVVIEKIAYKPLRKASPLAVLITAIGVSYFLQNFALILFGADTKSFTSVV 128 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + ++ + A+++++++++ A + ++ Sbjct: 129 SIPTIKLAG---------GDLTISGVTIATVISCIIIMAALMIFIKKSKSGQAMLAVSED 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ S +AG ++ +SP I + + G Sbjct: 180 KDAAQLMGVNVNKTISLTFAIGSGLAAIAGVLLCSAYPTLSPYT-GAMPGIKAFTAAVFG 238 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + ++ L +V+L++ Sbjct: 239 GIGSIPGALIGGILLGVIEILGRAYISSQLSDA-------------IVFAVLIIVLLVKP 285 Query: 337 HSLLR 341 LL Sbjct: 286 TGLLG 290 >gi|330963568|gb|EGH63828.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 355 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 134/337 (39%), Gaps = 16/337 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + F+ + + + ++ I L+ + GL+++ G G LSL A+ Sbjct: 27 IALWGLLVFAFVGVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ + G+ + L + ++S A ++ GLPSL+ +G YL ++TL + + Sbjct: 87 GAFAAYNLQLRVPGMPLLLGFALGGLVSAAVALLFGLPSLRIKGFYLLVSTLAAQFVVEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L ++ TN A + Y + L + L Sbjct: 147 VLTRFSWFTNDNASGVITSPPLI-------------IAGVSFSSPQGRYLLTLALVVLLF 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + L R + W +RD A + + AKL AFA+S ++G+AG+ +A A Sbjct: 194 WLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGIAGSLWAFAYLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F + + ++ I+I+GG+ S+ A ++ L ++ L+ Sbjct: 254 TVEPHGFDLNRSFQILFIIIIGGLGSVQGNFFGAAFIVLFPILLGNLSALLPVGLIDSGQ 313 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 N++ L + ++ L RL R Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARLWQRFRQRAR 349 >gi|298294086|ref|YP_003696025.1| urea ABC transporter permease UrtB [Starkeya novella DSM 506] gi|296930597|gb|ADH91406.1| urea ABC transporter, permease protein UrtB [Starkeya novella DSM 506] Length = 535 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 94/307 (30%), Gaps = 17/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I M A GL+I+ G +G+++L IGAY ++ L+ Sbjct: 244 LYNGLSFASILFMAAIGLAIIFGLMGVINLAQGELIMIGAYVTWLVQQGLRSVAPGLLDW 303 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++ ++ L + ++L W + V Sbjct: 304 YLILAIPAAFLVTAAIGIALEAAL--LRHLYKRPLMSLLATWAVSLFLVNLVRVIFGTQN 361 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + I+ + +L A L +R+T + R + N+ Sbjct: 362 LQFETPFYVTGGVPVIGDFIFTWNRMFAILFAVVTLALTWLVVRKTPLGLNIRAVTQNRD 421 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + AF + S G+AG + + I +V+LGG+ Sbjct: 422 MAACIGIPTRRVDMMAFGLGSGLAGLAGLALSPIYSV--NPQMGQNFIIDSFMVVVLGGV 479 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ A + + L + ++++ + + R Sbjct: 480 GTIAGTVVAALGIGQINVLIEPLWGAVAAK-------------VIVLLMIIGFLQWRPEG 526 Query: 339 LLRLRTP 345 L ++ Sbjct: 527 LFAVKGR 533 >gi|242239264|ref|YP_002987445.1| inner-membrane translocator [Dickeya dadantii Ech703] gi|242131321|gb|ACS85623.1| inner-membrane translocator [Dickeya dadantii Ech703] Length = 295 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 120/310 (38%), Gaps = 19/310 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +++ + IY + A L++ G GLL+ + IGAY+ I ++ L + ++ Sbjct: 2 SEFLLHICCIGGIYAIIALALNLQAGYAGLLNFGHIAFVGIGAYAIGIGS-QFDLPLLVV 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 IP + + ++M L + DY IATL ++EI + ++ +T G GI Sbjct: 61 IPAGILCALLVSILMALLGRQLSADYWGIATLALAEIIRIAVMNAGGLTGGAQGIGGLSA 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + ++ + L + L + A R +R+ Sbjct: 121 PWSSDGQATDA--------------LIFAALIFIVLILCTLASVRLADSRFGRALRLMRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + + K A S+ +AG A +SPD SE ++ S+V++ Sbjct: 167 QPQLAMCMGYALPWLKCRALMCSALMCSLAGMLLAWYTAYVSPDYLLSSETFLIWSMVMI 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ + + +VE+ + + L L +A+ L +L R Sbjct: 227 GGLGNIRGVLLG----VALVEVLYNFIPFARDYLQIGSDLTGALRLGLTGLAMLLCLLTR 282 Query: 336 SHSLLRLRTP 345 LL + Sbjct: 283 PGGLLPEKMR 292 >gi|312863000|ref|ZP_07723239.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Streptococcus vestibularis F0396] gi|322517393|ref|ZP_08070267.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|311101495|gb|EFQ59699.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Streptococcus vestibularis F0396] gi|322123991|gb|EFX95547.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 294 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 104/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y +GA+ + ++ W+ + Sbjct: 10 LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMMGAFVGYYAINSLKMNFWIALVF 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G+++ + + + I+ LI + L G Sbjct: 70 SMIVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVYFVGADTRS------- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ + + +L+ L ++ L +++T + A R + + Sbjct: 123 ----FPQSIKMHTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S+ G AG + I P M + I +LGG+ Sbjct: 179 AAELMGINVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L + ++ L +++L+R Sbjct: 238 GIIPGAALGGFVIGILETL-------------STAIGLSSYRDAIVYGVLIVILLLRPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|254295067|ref|YP_003061090.1| urea ABC transporter permease UrtC [Hirschia baltica ATCC 49814] gi|254043598|gb|ACT60393.1| urea ABC transporter, permease protein UrtC [Hirschia baltica ATCC 49814] Length = 370 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 103/346 (29%), Gaps = 28/346 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ ++L + Y ++ + L + A GL ++ G G+LSL + + +G Y Sbjct: 36 ILPAIILLAAIAPFLLSDYDLNLLGRFLSLSILALGLVLIWGHGGILSLGQGVFFGLGGY 95 Query: 80 SYVILGSR--------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + +W I ++ + + A Sbjct: 96 AIAMHLKLADLASGELPDFMVWSGIETLPLLWQPFQNPIFTLLAIILVPGIFAALFSWLV 155 Query: 132 IFQNI------LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + LI + + + P S +Y+ Sbjct: 156 FNRRVSGTYFALISQALALAFATLLVSRQDWTGGFNGLTNFSTLLGQPLSAASMNYAIYW 215 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 L + L + WL + R RD + L K+ AF+V++ GM+ Sbjct: 216 ATLIILCLCFLGLKWLLSSQFGVMLRASRDGENRVRFLGYNPTPIKVVAFSVAAMLAGMS 275 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA F ISP +I +I V LGG SL T ++ Sbjct: 276 GALFTLHAGNISPAAVGVIPSIEMIIWVALGGRFSLIGAIAGTILINV------------ 323 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 S + +F + L + L L ER Sbjct: 324 --SRDRISSAFPELWLYFIGALFVLSVTFLPKGLAGLYEKLTTKER 367 >gi|226193808|ref|ZP_03789410.1| urea ABC transporter, permease protein UrtB [Burkholderia pseudomallei Pakistan 9] gi|225934113|gb|EEH30098.1| urea ABC transporter, permease protein UrtB [Burkholderia pseudomallei Pakistan 9] Length = 456 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 182 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 241 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + S + + Sbjct: 242 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 299 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 300 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 359 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 360 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 417 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 418 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 455 >gi|194337049|ref|YP_002018843.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1] gi|194309526|gb|ACF44226.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1] Length = 287 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 122/296 (41%), Gaps = 22/296 (7%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 YI + I + IYVM + LS+ G G++SL Y IGAY+ +L Y + + Sbjct: 3 YILHLLIIVSIYVMLSQSLSLTAGFAGMISLAHAGFYGIGAYTTALLSINYQMPFIYTLF 62 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 +I G M++ + +L+ DY I TL + + IL W +TNG GI + Sbjct: 63 FGILICGIIAMLVSIIALRTIDDYFIICTLGIQIVIFTILNNWMSLTNGPMGIMGIPSIS 122 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + + + + I + +++ + + +++ Sbjct: 123 VFQIDFSNK--------------LSFLILSIIFSVVIFIFIKLIVKSSFGRVLKALSEDE 168 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 S+ + +K+ AF +SS + GA +A + P F +E+I ++SIVI+GG Sbjct: 169 IYTQSVGKNVYLSKVIAFTISSMIAAIPGALYAHYTSFVDPSSFTVNESIFILSIVIIGG 228 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 M +L I A A L+ + E + + + I L LVI Sbjct: 229 MRNLWGIIFAAAFLVLLPEALRFVGLP--------NNIAANLRQIIYGIILILVIF 276 >gi|189349621|ref|YP_001945249.1| branched-chain amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|189333643|dbj|BAG42713.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 395 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 99/350 (28%), Gaps = 32/350 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 52 LAVGIGVPLAALVAPESSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + +++ + Sbjct: 112 FALGGYAIGMYLMREIGRDGQYGSDLPDFMVFLDWHQLPWYWAGTQHLAWALLLVVIVPA 171 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + A + +I Y + + R FP + Sbjct: 172 VLAWVFGFFAFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPIT 231 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 232 SPGTRTVLLLLTFATLVLAFVAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + ++P +I + V +GG +L + G Sbjct: 292 TVSAVLCGIAGALYVPQVGIVNPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + F + + LV L+ ++ + Sbjct: 352 SVFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGVVER 387 >gi|221070045|ref|ZP_03546150.1| urea ABC transporter, permease protein UrtB [Comamonas testosteroni KF-1] gi|220715068|gb|EED70436.1| urea ABC transporter, permease protein UrtB [Comamonas testosteroni KF-1] Length = 537 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 90/291 (30%), Gaps = 16/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + ++ + + Sbjct: 262 ITYGLMGVINMAHGELIMIGAYATYLVQVAFQRWLPESLFGWYLVVAVPVAFLASALVGA 321 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + I L + +L + + + +G + + Sbjct: 322 VLERGVIRFL-YGRPLETLLATFGISLVLQQTVRSLFGAQNVGVENPVWMSGGIALLPNL 380 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +++ + A + + RT + R + N+ + AFA+ Sbjct: 381 TLPWNRIAIIVFAFAVLAGVAFMIARTRLGLFVRGVTQNRAMASCVGVNTARTDTYAFAL 440 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A S+ + + +V+LGG+ L+ A L + +L Sbjct: 441 GSGIAGLAGC--ALSQIGNVGPDLGQNYIVDSFLVVVLGGVGQLAGTVYAALGLGVLSKL 498 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 G +++ + + I R + L+ S Sbjct: 499 LEGWTGAVLAK-------------IAVLLFIVVFIQKRPQGIFALKGRSAE 536 >gi|289177904|gb|ADC85150.1| LivH [Bifidobacterium animalis subsp. lactis BB-12] Length = 488 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 80/302 (26%), Gaps = 24/302 (7%) Query: 44 IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103 I L+ + A G+++V G+ GL S + +G + + + L + I Sbjct: 209 IFGLMLGLMAVGMNLVYGTTGLSSFSHGEQVTLGGLMAYVGTQMLHMPVVLSAIFAVAIG 268 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 G + M I A Y+ + Sbjct: 269 ALAGWVQNQLVWAPLRHKRVGVMQQM----------IVTIGLSMALQYIYQFFFGGDIKG 318 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 ++ S+ ++L T + A R + DN + Sbjct: 319 IVKSVPEGIQLGPIVTNAPTLIAAAIALVTIVSVTVFLYCTRLGRATRAVSDNAALAAAS 378 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + + +S ++G + I+ + + +++ + V LGG+ + + Sbjct: 379 GINVDSVVRIVWILSCGLAALSGVLIGIHLNGIAWNT-GVTLLMLMFAAVTLGGLGTANG 437 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 I+ V ++ + + R + + Sbjct: 438 ALVGALIVGIVADMSTLVIPSDMRYASALAILILVLLI-------------RPQGIFGKQ 484 Query: 344 TP 345 Sbjct: 485 KR 486 >gi|318040811|ref|ZP_07972767.1| putative membrane protein of urea ABC transport system [Synechococcus sp. CB0101] Length = 384 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 98/335 (29%), Gaps = 29/335 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 +++ + + ++ + L + A G+ ++ G G+LSL I +A+G Y+ Sbjct: 17 VLIVVGALVLPVVLPPFRLNLLGRFLSLGIVALGVDLIWGYTGMLSLGQGIFFALGGYAL 76 Query: 82 VILGSRYGLSI-----WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN- 135 + L + + + + + Sbjct: 77 AMYLQLNELKPGELPEFFSLYGVKSLPAFWQPFNSPLFTLVAIWVIPAVVAGLVGYLVFR 136 Query: 136 ---------ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 IL + + + S R F + ++++ Sbjct: 137 NRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTSTARVFGELIGSDGMQRNLFWL 196 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + L+ + WL +A IRD++ K FAV+ A G++G Sbjct: 197 TVVITVLAFLLCRWLTHGRFGDALIAIRDDEPRLRFTGYNPTAYKTVVFAVAGALAGISG 256 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A + +SP +I ++ V +GG +L ++ L Sbjct: 257 ALYTVQSGIVSPQYMAVPFSIEMVIWVAVGGRGTLIGAVLGAVLINYAKSLVSE------ 310 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+L L+ Sbjct: 311 --------ALPETWLFIQGGLFLLVVLALPDGLVG 337 >gi|295701317|ref|YP_003610318.1| inner-membrane translocator [Burkholderia sp. CCGE1002] gi|295441640|gb|ADG20807.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 316 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 101/310 (32%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + I +Y + A G ++V G LG+++ +GA + Sbjct: 8 IMNGLILGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + V+ +I+ A ++G + L A + + Sbjct: 68 LTLVVALVIAAAVCAVVGYTIERVAYRPLRRAPRLAPLTTAIGVSILLQTLAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISMTEIVIIVVAFVVMGGLLLLVHKTRLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + + F + F + SA +AG A+ M F + + Sbjct: 188 AENPNVASLMGVSPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIVVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|126734799|ref|ZP_01750545.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter sp. CCS2] gi|126715354|gb|EBA12219.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter sp. CCS2] Length = 327 Score = 89.5 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 107/287 (37%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ L+ ++ + ++ + +I+ + A GL+I +G G++SL + + IG Sbjct: 10 FVLALLIAVPAWAVVANEPFTITLATRAVIFALAATGLNIALGLGGMVSLGHAVFFGIGG 69 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL L+ + + ++ L ++ G + L+ I Sbjct: 70 YAMGILAHHAQTYTPLMDGLFLIEGTKSMPVIWLVAMVTSGIAALLIGLVSLRTGGVYFI 129 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + G S+ FP + I + + + + + Sbjct: 130 MITLAFGQMFYYFSISWATYGGEDGLSIYLRNDFPGLNTLVPINFFAICFTILLIVLLLN 189 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + ++ A R + ++ KL AF +S G+AGA FA +SP Sbjct: 190 ALIAKSPFGLALNAARQVPQRAEAVGLNPQRLKLVAFVISGVITGLAGALFADLNRFVSP 249 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 MF + + ++ +ILGG+ L + + + + ++ Y+ Sbjct: 250 TMFSWQTSGEIMIFIILGGVARLCGPVVGAVVFVMLEHVLGDLSDYW 296 >gi|194289187|ref|YP_002005094.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis LMG 19424] gi|193223022|emb|CAQ69027.1| putative Branched-chain amino acid ABC TRANSPORTER, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 402 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 100/354 (28%), Gaps = 32/354 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + V LL Y ++ +I+ + + A L +V G G+LSL + + Sbjct: 38 IVGIGVPVCALLVPEGHPLHLSAYALTLVGKIMCFALAAIALDLVWGYCGILSLGHGLFF 97 Query: 75 AIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 A+G Y+ + R + + + G +L + Sbjct: 98 ALGGYAMGMYLMRSIGREGVYKSDLPDFMVFLDWKELPWFWHGTDHLGYALLLVVLVPGV 157 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSSF 176 + IK ++ + A L F R F + Sbjct: 158 LAWLFGFFAFRSRIKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRIAGFAIAA 217 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 ++ + ++ + + +RD + + + KL + Sbjct: 218 PQTRAALFVLTFLALLGGFVACRYIVTSKLGRVVTAVRDAEMRVMFSGYSPLGYKLFVWT 277 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 S+ G+AGA + I+P +I + V +GG +L ++ G Sbjct: 278 FSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPVIGAFLVNGAKT 337 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L F F L+ LV L + L Sbjct: 338 L--------------FTAHFAEYWLFLLGAMFVLVTLYLPDGVTGLWQRWRERR 377 >gi|188532832|ref|YP_001906629.1| Putative branched-chain amino acid transport system, permease component [Erwinia tasmaniensis Et1/99] gi|188027874|emb|CAO95731.1| Putative branched-chain amino acid transport system, permease component [Erwinia tasmaniensis Et1/99] Length = 519 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 17/290 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ IGAY+ ++ + + +++ + Sbjct: 246 ITYGLLGVINMAHGEMLMIGAYATWMVQHLFQRYAPEWLTFYPLLALPAAFFLTAAIGMM 305 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L W + + L + + + Sbjct: 306 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNLEVANPAWLSGGWQVLPNL 363 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+L + + L L +T + R + N+ + AF + Sbjct: 364 MLPYNRLAVMLFVVGVLVLTWLLLNKTRLGLNVRAVTQNRAMADCCGVATGRVDMLAFGL 423 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+ GG+ L+ A L + ++ Sbjct: 424 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVTGGVGQLAGTVCAALGLGILNKV 481 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L+++ + L I R L L+ + Sbjct: 482 LEPQIGAVLGK-------------ILILVLIVLFIQKRPQGLFALKGRAI 518 >gi|218780757|ref|YP_002432075.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218762141|gb|ACL04607.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 325 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 118/324 (36%), Gaps = 30/324 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V+ +LL L + +ILIY +FA G ++ +G G+LS + +G Y Sbjct: 13 IVWAILLVLAPMPLVLS---TPLATEILIYAIFAMGFNLALGHTGILSFGHAAYFGLGCY 69 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L ++ + + + +G + + ++K +G Y A+ +L S++ + + Sbjct: 70 ITGMALRYLELGVFPALLLGTVAAGLAALALAALAVKRQGVYFAMISLAFSQMLYFLALS 129 Query: 140 -WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K +T G+ G+ +L L R + Y+ L L+ + Sbjct: 130 PLKGLTGGEDGLKFIPKLAIEFPVTLDLSRPWS-----------AYWFTLLFFALALFAM 178 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + + +R+N+ SL K+ + A+S F G+AG + Sbjct: 179 RQVLNSPMGRLLPAVRENEARVKSLGFPSHALKIMSMAISGLFCGLAGGLLTVYLGYVPL 238 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + ++ + ILGGM S S + + + ++ + Sbjct: 239 STLHWFTSGSIMMMTILGGMQSFSGPIVGVLVFLCLQDVTGNFTERWE------------ 286 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 +IL+ + Sbjct: 287 ---LFSGTLFMALILLFPQGVAGT 307 >gi|291460305|ref|ZP_06599695.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Oribacterium sp. oral taxon 078 str. F0262] gi|291417060|gb|EFE90779.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Oribacterium sp. oral taxon 078 str. F0262] Length = 294 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 105/307 (34%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ +GAY+ I + GL I Sbjct: 6 SYLLNGISLGAVYAIIALGYTMVYGIAKMLNFAHGDILMLGAYTAFIAFNSLGLPIPASA 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ ++ G++ + K ++A LI + +L + G + Sbjct: 66 LLAVIVCTLTGILTERIAYKPLRGANSLAVLITAIGVSYLLQNLALLIFGANPKSFQSFI 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +L ++A ++L++ RT A + ++ Sbjct: 126 PIKPLHLAG---------GALTIPGETIATILTGLIVAAGLLLFVHRTKAGQAMLAVSED 176 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +AG ++ ++P I +LG Sbjct: 177 KGAATLMGVNVNATIAMTFAIGSALAAVAGILLCSAYPSLTPTT-GAMPGIKAFVAAVLG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ IL + L + + F L LV+L++ Sbjct: 236 GIGSIPGAFLGGVILGILENLSKAYISSKLSDAIVFS-------------VLILVLLVKP 282 Query: 337 HSLLRLR 343 +L + Sbjct: 283 SGILGKK 289 >gi|90425184|ref|YP_533554.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90107198|gb|ABD89235.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 389 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 106/360 (29%), Gaps = 38/360 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGAT------KSQKYIDSMGIQILIYVMFAWGLSIVVG 61 L++ I ++ +LL L Y+ ++ + + Y + A + ++ G Sbjct: 10 LDRSATIFLVIVAAVGILLPLANLLFPEGSALHVPTYLMALFGKYVCYALLALSIDLIWG 69 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G+LSL +A+G Y+ + R S + LP + D Sbjct: 70 YCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLNYNELPWYWYGFDM 129 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162 A L++ + + + + + D + Sbjct: 130 FWFAALMVLVVPGLLAFGFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + F ++ + L I + + + IRD + Sbjct: 190 LTDFKDILGFNVQADGTRAALFALSCLALALGFLICRAVVTSKLGKVLIAIRDAESRTRF 249 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L + KL F +S+ G+AGA + I+P F +I + V +GG +L Sbjct: 250 LGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPGEFAPGNSIEAVIWVAVGGRGTLI 309 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A ++ + ++ LV L+ ++ Sbjct: 310 GAALGAVVVNYAKTVFTS-------------GPLAPYWLFMLGALFILVTLLLPKGIIGT 356 >gi|307298926|ref|ZP_07578728.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2] gi|306915351|gb|EFN45736.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2] Length = 320 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 132/318 (41%), Gaps = 15/318 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V+ +LL + Y + + LI+ + A GL + G G +SL YAIG Sbjct: 5 IFVIGAILLIILFPLFVKNSYHLYLMNRALIHAILATGLVFLTGFAGQISLGQAGFYAIG 64 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS + G+ I + I +IS G ++ +PS K + +L++ T+ +I ++ Sbjct: 65 AYSSAYFTVKLGMPIVVGIIAGIVISVIAGFLLSIPSFKLKAFFLSLVTIAFGQIVWMLV 124 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I PIT G G + F ++ ++++ G+ LS I Sbjct: 125 INLTPITGGPYGFFGIPFYSF---------------GGVMLSFGQVFWLFGGLLLLSVFI 169 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + ++ + A + D+ A + + K++AF S+ G+AGA +A +S Sbjct: 170 MFRIKHSHFGRAMLAMNDDDVATETCGISTKKLKIAAFGFSAGLAGLAGALYAHLAGFLS 229 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F E+ +++ ++GG+ +S L + E + + ++ Sbjct: 230 PEPFTFFESSNFVAMAVVGGLRHMSGGVVGGIGLTLLPEFLRFGGWENYYLMVTSLIVIV 289 Query: 318 MRHTTLMVIALFLVILMR 335 + M + L L R Sbjct: 290 IVIFMPMGLGPILESLFR 307 >gi|317404504|gb|EFV84913.1| inner-membrane translocator [Achromobacter xylosoxidans C54] Length = 328 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 117/306 (38%), Gaps = 19/306 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ + + LIY + A L +V+G ++S + + +G Y+ I+ + L Sbjct: 34 PFLIGVVTRFLIYGLAAVSLDLVIGYGAMVSFGHAMFFGLGGYAVGIIAFHTTEAGPLFG 93 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + I + +A F I + + + + Sbjct: 94 WAGSNAALVVWPIALAVCALAGWLFGYLALRTRGVQFIMITLAFGQMVY----FILVSLQ 149 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++ G + + P + + YYV L + + + + + + + +R + Sbjct: 150 FYGGDDGLMISQRNVLPGLNLENPLTFYYVCLALLTVWTLLCIRVTNSRFGMVLQALRQS 209 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L +LSAF +S+ G+AG +A ++PDM ++++ +++IVILG Sbjct: 210 ERRAINLGVAPTPYRLSAFVLSAVGTGLAGVLWANYAGLVTPDMAAWTKSGELMAIVILG 269 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +L A+ +G+ ++ + ++ M L LV+L Sbjct: 270 GVGTLLGPIAGAAVFLGLEQMLSSLTEHW---------------LLYMGPVLVLVVLWGQ 314 Query: 337 HSLLRL 342 L Sbjct: 315 KGLFGR 320 >gi|227115092|ref|ZP_03828748.1| putative branched-chain amino acid transport system, permease component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 529 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 84/288 (29%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ S + +++ + Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYATWLVQSLCQQFAPSWLAYYPLLALPVAFFITAGIGMV 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNLEVANPAWLSGGLRVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V++ + + L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIAVIVFVLGVLLLTWLILNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L + ++ Sbjct: 434 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +++I + L I R L + Sbjct: 492 LEPQMGAVLGK-------------IVILILIVLFIQKRPQGLFAFKGR 526 >gi|331015520|gb|EGH95576.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 355 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 143/352 (40%), Gaps = 22/352 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF LR ++ + + F+ + + + ++ I L+ + GL+++ G Sbjct: 18 RIFRLRQDR------VALWGLLVFAFVGVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GA++ + G+ + L + ++S A ++ GLPSL+ +G Sbjct: 72 YAGQLSLGSAAFMAVGAFAAYNLQLRVPGMPLLLGFALGGLVSAAVALLFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YL ++TL + + +L ++ TN A + + S + Sbjct: 132 YLLVSTLAAQFVVEWVLTRFSWFTNDNASGVITSPPLIIAGMNFSSPQG----------- 180 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Y + L + L + L R + W +RD A + + AKL AFA+S Sbjct: 181 --RYLLTLALVVLLFWLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGF 238 Query: 241 FIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 ++G+AG+ +A A + P F + + ++ I+I+GG+ S+ A ++ L Sbjct: 239 YLGIAGSLWAFAYLGTVEPHGFDLNRSFQILFIIIIGGLGSVQGNFFGAAFIVLFPILLG 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ L+ N++ L + ++ L RL R Sbjct: 299 NLSALLPVGLIDSGQLENIQKM-LFGALIIAFLIKEPEGLARLWQRFRQRAR 349 >gi|209517438|ref|ZP_03266279.1| inner-membrane translocator [Burkholderia sp. H160] gi|209502092|gb|EEA02107.1| inner-membrane translocator [Burkholderia sp. H160] Length = 316 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 102/310 (32%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ +GA + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGSV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + ++ +I+ A ++G + L A + I + Sbjct: 68 LTLVIALIIAAAVCSVVGYTIERVAYRPLRRAPRLAPLITAIGVSILLQTLAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIASGPNNPGAVISMTEIVIIVVAFIVMGGLLLLVHKTRLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + + F + F + SA +AG A+ M F + + Sbjct: 188 AENPNVASLMGVSPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIVVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|116617600|ref|YP_817971.1| ABC transporter permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096447|gb|ABJ61598.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 324 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 78/340 (22%), Positives = 138/340 (40%), Gaps = 43/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 KY LA + +L+F+ Y + + I I ++ A GL++VVG G SL Sbjct: 7 KYTLSWASLAAMGFILIFVAQMLGLIGHYGITTIVLIGINIIAALGLNLVVGISGQFSLG 66 Query: 70 CVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ + + L + ++SG +I+G+P+L+ RGDYLAIATL Sbjct: 67 HAGFMAIGAYATALVMEVVPGIIGFILGMAAGIVVSGVIALIVGIPTLRLRGDYLAIATL 126 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EI + +++ K F I + ++ Sbjct: 127 GFAEIIRIVIMNLKITNG--------------------------PAGIFGIAPFVSWQLV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++ I++ R+ A +RDN+ A SL K+ AF + F MAG+ Sbjct: 161 YILAVITLIIVVNFVRSMPGRAIIAVRDNEIAAESLGINTTKYKVIAFVTGALFAAMAGS 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A+ I+P + F ++I+++ I+++GG+ S+S L + + Sbjct: 221 LRASFIQSIAPKDYAFMQSIMILIIIVIGGIGSMSGTVVTAIALGVLDTMLQNF------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L V+L+R + R S Sbjct: 275 ---------GSLRMVIYAVILIAVMLVRPQGIFGSRELSL 305 >gi|89897771|ref|YP_521258.1| hypothetical protein DSY5025 [Desulfitobacterium hafniense Y51] gi|219670920|ref|YP_002461355.1| inner-membrane translocator [Desulfitobacterium hafniense DCB-2] gi|89337219|dbj|BAE86814.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219541180|gb|ACL22919.1| inner-membrane translocator [Desulfitobacterium hafniense DCB-2] Length = 293 Score = 89.5 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 99/307 (32%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ S +Y + A G ++V G +L+ +GAY +R L + Sbjct: 5 SFLISGLSLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVCFFATTRGNLHPVFGV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ ++ G+++ + K ++A LI + L + + Sbjct: 65 LLAMVVCTILGVVIERLAYKPLRAATSLAVLITAIGVSYFLQNAALLLWSSNPKVFTSVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + ++ + A + + +T + A R ++ Sbjct: 125 GNGSLKLFD---------GQLTISVIAIVTIVACLIIMAVLTWFTGKTKMGKAMRACSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + F FA+ SA +AG ++ + I + +LG Sbjct: 176 KGAAQLMGINVNFTISVTFAIGSALAAIAGVLLCSAYPTL-MPTTGSMPGIKAFTAAVLG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + G + + F L L +L++ Sbjct: 235 GIGSIPGAMIGGILLGVIEIFGKGYISTQLSDAIVFS-------------VLILTLLVKP 281 Query: 337 HSLLRLR 343 LL + Sbjct: 282 TGLLGKK 288 >gi|227821175|ref|YP_002825145.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] gi|227340174|gb|ACP24392.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 325 Score = 89.5 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 63/310 (20%), Positives = 113/310 (36%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 I+IL + +FA ++V+G GLLS + AY + L L + Sbjct: 44 FLIKILCFALFAAAFNLVLGYAGLLSFGHAAFFGGAAYITAHAAKVWQLPFELAVLAGTA 103 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+ G +++ G Y A+ TL ++++ + ++ T G+ GI R Sbjct: 104 FAALLGLAFGTLAIRRHGIYFAMITLALAQMIYFMAVQMP-FTGGEDGIQAVPR------ 156 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + + MYY +LG L II + + IR+N+ Sbjct: 157 -------GYLLGIIDLRDITAMYYTVLGGTILGLVIIWRTVNSPFGHILSAIRENETRVT 209 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G AGA A + S + + VI + +LGGM +L Sbjct: 210 SLGLKPERYKLIAFTLSAALSGFAGALKAIAFQLASLVDVTWHMSGEVILMTLLGGMGTL 269 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +I++G+ T ++ + + ++M + Sbjct: 270 IGPIVGASIVVGLEHFLSTSGLPI---------------TFIIGLFFVVCVMMFRRGVFG 314 Query: 342 LRTPSNFLER 351 + Sbjct: 315 ELKALLERSK 324 >gi|88855851|ref|ZP_01130514.1| branched-chain amino acid transport system permease protein [marine actinobacterium PHSC20C1] gi|88815175|gb|EAR25034.1| branched-chain amino acid transport system permease protein [marine actinobacterium PHSC20C1] Length = 326 Score = 89.5 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 127/306 (41%), Gaps = 5/306 (1%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 Y + A GL++ G GLL++ AIGAY Y I +G W + V S + Sbjct: 22 YALAALGLAMHFGFTGLLNMGMAAFMAIGAYGYAISILTFGFPWWGGMLVGVGGSLIFAL 81 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILI-KWKPITNGKAGIYVADRLYFLGTTVRSLI 167 I+G+P+L+ RGDYLAI T+ +E+ + + + G A F Sbjct: 82 ILGIPTLRLRGDYLAIVTIAAAEVVRLLFLTTTFDKYTGSADGLSGYHASFRAFNPIPDG 141 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + P + ++ + + L+A I+ + R+ + IR+++ A +L + Sbjct: 142 TYGFGPWVYNANGWWVRIFGIVILALAALILWTVMRSPWGRVIKGIREDEDAVRALGKNV 201 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 KL + + F M G +A ++P ++ S V + ++LGG ++ Sbjct: 202 FSYKLQSLMLGGVFGAMGGIIYALPA-SVNPGVYVTSLTFFVYTALLLGGAATIFGPIIG 260 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMR---HTTLMVIALFLVILMRSHSLLRLRT 344 + I GV L + N + + L+ +AL L+++ R +L + Sbjct: 261 SVIFWGVQTLLSNLLPALVNIGVLPFMTTTQSQTVRFILVGVALMLLVIYRPQGILGNKK 320 Query: 345 PSNFLE 350 F++ Sbjct: 321 ELTFVK 326 >gi|296331301|ref|ZP_06873773.1| urea ABC transporter, permease protein UrtC [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676287|ref|YP_003867959.1| urea ABC transporter permease protein UrtC [Bacillus subtilis subsp. spizizenii str. W23] gi|296151416|gb|EFG92293.1| urea ABC transporter, permease protein UrtC [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414531|gb|ADM39650.1| urea ABC transporter, permease protein UrtC [Bacillus subtilis subsp. spizizenii str. W23] Length = 356 Score = 89.5 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 99/336 (29%), Gaps = 27/336 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + Q++ + + L + + A G+ ++ G G+LSL + + +GAY Sbjct: 11 LVMFALFIAAPIFLQEFRLGLLAKFLCFAIVAVGICLIWGYTGILSLGHGVFFGLGAYCM 70 Query: 82 VIL-------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI-- 132 + W + I + L Sbjct: 71 AMYLKIEASPSGIPDFMEWTGVSELPWIWAMFRYPFSAIAAAVIVPVFLALLLGYFTFRN 130 Query: 133 ----FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 LI + + + + + F++ + + +Y+ + Sbjct: 131 NIKGVYFSLISQAVVVVVVTLFIGSQDITGGTNGLTNFYTIFQYALADPAIKQILYFTTV 190 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 +S L+L R+ + +RD + K+ + VS+A G+AG Sbjct: 191 FFLGVSVVFALFLTRSRFGRLLQAVRDGESRVRFFGYHSTVFKVFIYCVSAAMAGIAGML 250 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 F ISP+M ++ ++ V +GG S+ + G+ Sbjct: 251 FVLQDGMISPEMMGIIPSVEMVLWVAIGGRHSIFGAVLGALLTNGMKSYLSEY------- 303 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + +V+L ++ L Sbjct: 304 -------YPDIWLYFLGALFIIVVLYMPKGIVGLFE 332 >gi|255659026|ref|ZP_05404435.1| amino acid ABC transporter, permease protein [Mitsuokella multacida DSM 20544] gi|260848811|gb|EEX68818.1| amino acid ABC transporter, permease protein [Mitsuokella multacida DSM 20544] Length = 318 Score = 89.5 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 134/340 (39%), Gaps = 41/340 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L K D I+ + +VV +L L + + + I I ++ A L+++ G G S Sbjct: 4 LRKNDCIMLVFSVVLFAVLQLLITERILSSFWQLNLLIIGINIILAASLNLINGYTGQFS 63 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L A+GAY V+L + + L + + + +G G ++G+P+L+ RGDYLAIATL Sbjct: 64 LGHAGFMAVGAYVGVVLTTNFHLPFAVALIAGGIAAGFLGFLVGIPTLRLRGDYLAIATL 123 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + EI + +++ + + + + + Sbjct: 124 GLGEIIRIVIMNIQYVGGAAGFKGIPHHTT--------------------------FAWV 157 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + I + A IR+N+ A S+ K+ AF + +AF G+AG Sbjct: 158 FFIMLFTLFFIKNFVNSNHGRACLAIRENEIAAESMGVNTTKYKVMAFTIGAAFAGVAGG 217 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 FA ISP F F + + +V++GG+ S++ ++ + Sbjct: 218 LFAHCFYLISPASFTFMQTFNYLIMVVMGGLGSITGSIAGAFVVTFISAALAS------- 270 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + IAL L++ R L +N Sbjct: 271 --------WPEFRMIIYAIALILLMFYRPQGLFGYMEITN 302 >gi|171057480|ref|YP_001789829.1| inner-membrane translocator [Leptothrix cholodnii SP-6] gi|170774925|gb|ACB33064.1| inner-membrane translocator [Leptothrix cholodnii SP-6] Length = 335 Score = 89.5 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 115/308 (37%), Gaps = 15/308 (4%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 L + L F+ + Q + S +I+IY + A L++ +G GL+S Sbjct: 7 RPATAIPLLLFIGLATVPFIASALEQPFWTSFFARIVIYAIAATALNLALGYGGLVSFGH 66 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + +G+Y+ + S W+ + + ++ +++G SL+ G + TL + Sbjct: 67 ALFLGLGSYAVALPAFHGIESGWVHLALCLVVCSVGALVIGAISLRTSGMAFIMITLAFA 126 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 ++ +L+ K ++ F S + +Y + Sbjct: 127 QMGYFLLVSLKQYGG---------------DDGLAVSTTSAFGSVNLGSSHVLYAAAWAV 171 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + LR A R R N + ++ +L AF +S A G+AG A Sbjct: 172 LAMVTWWMARLRSAPFGMALRGARQNARRINAIGLQAQKLQLVAFIISGAISGVAGLLLA 231 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 SP ++ + +I +V+LGG+ ++ + +G+ E+ G+ ++ Sbjct: 232 NLNAYASPSSMAWTVSGELIVMVVLGGIGTVFGPLVGALLFLGLEEVLKGLTEHWMAIFG 291 Query: 311 KFDCSFNM 318 + Sbjct: 292 PLIVLMAL 299 >gi|158334048|ref|YP_001515220.1| urea/ branched-chain amino acid ABC transporter permease [Acaryochloris marina MBIC11017] gi|158304289|gb|ABW25906.1| urea/ branched-chain amino acid ABC transporter, permease protein, putative [Acaryochloris marina MBIC11017] Length = 392 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 95/343 (27%), Gaps = 28/343 (8%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 ++ + ++ L Q++ +M + + + A G+ ++ G G+LSL I Sbjct: 23 GVIVVAIALFIQFGAPLLLTAIGQEFRINMLGRFMSLAIVALGIDLIWGYTGMLSLGHGI 82 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 +++G Y+ + L + + Sbjct: 83 FFSLGGYALGMFLQLQLPEGQLPEFFTLFGVDKLPGFWQPFHSLPFTLAAIVLIPASIAA 142 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF--------------FRFPSSFVI 178 L+ I I L S + F + Sbjct: 143 LLGYLVFRNRIRGVYFSILTQASLIVFFNFFNSQQKLINGTNGLKTDTTKIFGVYAGSDQ 202 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + Y + + L+ + WL + IRD++ K+ FAVS Sbjct: 203 AQSVFYTLTVIFLVLAYLLCRWLTSGRLGRLLIAIRDDESRVRFSGYDPTGFKVLVFAVS 262 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + G+AGA + ISP + +I ++ V +GG SL + L Sbjct: 263 AGLAGIAGALYTVQSGIISPKTMDIAFSIEMVIWVAVGGRASLVGAIFGALAVNFAKSLL 322 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +V+ + + Sbjct: 323 SE--------------QFPEIWLFFQGALFLVVVTVLPGGFVG 351 >gi|149201136|ref|ZP_01878111.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. TM1035] gi|149145469|gb|EDM33495.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. TM1035] Length = 657 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 101/322 (31%), Gaps = 26/322 (8%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 LG ++ + I+ + A GL+I G +G++++ +GAY+ + + Sbjct: 357 ALGLFQTFDLVLDGLSLASIFFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYV-VQLF 415 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT---LIMSEIFQNILIKWKPITN 145 + + ++ ++ G+ + +L L+ + L + Sbjct: 416 IPDYTVSLIIALPLAFVVTFGAGVVMERLVIRHLYTRPLETLLATFGISIALQQLAKNIF 475 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G + + + V + + A ++ L+RT Sbjct: 476 GTQARPLTAP---------DWLSGALTLNDIVSISNIRVAIFVLALIFLALLLFILKRTR 526 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + R + N S+ + F + S G+AG S + Sbjct: 527 LGLEVRAVTQNPGMAASMGIDPDRINMLTFGLGSGIAGIAGVAIGLYAQVTSEMGANYIV 586 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + +V + ++ +++ + + F+ S + T MV Sbjct: 587 QSFMTVVVGG--VGNVWGTLAGASMIGFLQ-----------KGIEWFNPSNTLAAQTYMV 633 Query: 326 IALFLVILMRSHSLLRLRTPSN 347 + + L I R ++ L+ + Sbjct: 634 LFVILFIQFRPKGIVALKGRAA 655 >gi|241664788|ref|YP_002983148.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|309780403|ref|ZP_07675153.1| amino acid uptake ABC transporter [Ralstonia sp. 5_7_47FAA] gi|240866815|gb|ACS64476.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|308920796|gb|EFP66443.1| amino acid uptake ABC transporter [Ralstonia sp. 5_7_47FAA] Length = 334 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 130/324 (40%), Gaps = 16/324 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+Y LLL + A Y + ++L + +FA ++++G GLLS + Y Sbjct: 16 VLYGLLLVALIAAPLVGAYPVFVA-KLLCFALFASAFNLLLGYTGLLSFGHAAFFGGAGY 74 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + ++ L + G+I+GL +++ +G Y A+ TL ++++ ++ Sbjct: 75 VAGYMMRDLHVTPELGLLAGTAAGAFIGLIVGLLAIRRQGIYFAMITLALAQMLYFFCLQ 134 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 P T G+ G+ R F + ++ +YYV+L + + +I+ Sbjct: 135 -VPFTGGEDGLQGVPR-------------GKLFGVIDLSSDLTLYYVVLVIVVAAFLLIV 180 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + I++N+ SL KL AF +S+A G+AG+ + Sbjct: 181 RTIHSPFGQILKAIKENEPRATSLGYDTDRFKLLAFVLSAALTGLAGSLKTLVLGFETLT 240 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FNM 318 +S + VI + ++GG+ LS A++I + + + + + Sbjct: 241 DVHWSMSGSVILMTLVGGLGILSGPLLGAALVIALENKLGDIGSFLAGATGIDGFNILGE 300 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 TT+ + +L ++ Sbjct: 301 SVTTVTGAIFVICVLTFRRGIMGE 324 >gi|121606420|ref|YP_983749.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120595389|gb|ABM38828.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 340 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 117/309 (37%), Gaps = 28/309 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY G + + I + Sbjct: 49 FVMKLLCFGLFACAFNLLLGFTGLLSFGHAAFFGSAAYVTGWFVKAQGWTPEMAILAGTV 108 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 +G G+++GL +++ +G Y A+ TL ++++ ++ T G+ G+ R Sbjct: 109 GAGLIGLVVGLVAIRRQGIYFAMITLAIAQMVYFFCLQAP-FTGGEDGLQGVPR------ 161 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + + MYY ++ + L I + + + IR+N+ Sbjct: 162 -------GNLFGMLSLQSDNAMYYFVVAVFVLCFLFISRIVNSPFGQVLKMIRENEPRAI 214 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+A G+AG+ + +S + VI + +LGG+ + Sbjct: 215 SLGYQVDRYKLLAFVLSAALAGLAGSLKTLVMGFATLSDVHWSMSGEVILMTLLGGVGTF 274 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+I + L + ++ + L +L ++ Sbjct: 275 FGPVMGAGIVISLQNLLADKVGSWVT--------------VIIGVIFVLCVLAFRKGVVG 320 Query: 342 LRTPSNFLE 350 Sbjct: 321 ELQAFRERR 329 >gi|284044094|ref|YP_003394434.1| inner-membrane translocator [Conexibacter woesei DSM 14684] gi|283948315|gb|ADB51059.1| inner-membrane translocator [Conexibacter woesei DSM 14684] Length = 356 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 128/342 (37%), Gaps = 11/342 (3%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + LA+ ++L L I+ + I LI ++ GL G G++S Sbjct: 8 RAGLWPPLALGLAIVLVASLVGGAGDVVIERVAILALINMVLVVGLWTFSGVTGVVSFGH 67 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V AIGAY L + L + + + P+ + I+ L+ + Sbjct: 68 VSFAAIGAYVCAFLTIPVPMKRGLFPEMPGFLDFLLTVHTDFPT------AIVISGLVAA 121 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + + + +AGI L + + + + R S+ + + Sbjct: 122 GFALVLAPAFVRLDGVQAGIATLALLAVVYNVLLNWEQVTRGSSTMIGVPADLTLSTAAG 181 Query: 191 CFLSAS-IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 ++A I R+ + R R++ A SL ++ + A+A+S+ +G GA + Sbjct: 182 WAVAAVCIAWAFARSRVGLRARAAREDAAAARSLGLRVVGDRTVAWALSAFVVGCGGALY 241 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A +PD F S +V+++++LGG+ SLS T + + EL + + + Sbjct: 242 AHFITTFNPDQFYLSLTFVVLAMLVLGGIGSLSGAVLGTVVYSLLAELLRRLQGGQWTGV 301 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L+++ L R L R + R Sbjct: 302 DLPAGTAEVVLAALLLLMLI----KRPRGLTGGREIPWPVPR 339 >gi|189352532|ref|YP_001948159.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|189336554|dbj|BAG45623.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 316 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ +GA + Sbjct: 8 VINGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSCIGLLQNHFPDLGSV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + ++ + +G + L A + I + Sbjct: 68 PTLCIALSAAAVVCAAVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + A ++L + +T + A R I Sbjct: 128 LAFPQLLPTDPINVIKATDTTPGAVISMTEIVIVVVAFLVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ M F + + Sbjct: 188 AENPGVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L IL + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|51245121|ref|YP_065005.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50876158|emb|CAG35998.1| probable high-affinity branched-chain amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 355 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 122/360 (33%), Gaps = 57/360 (15%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L V ++ L A+ Y+ + Y + A GL +++G G +S+ + Sbjct: 5 ISLFLFVIVIVGLHLLTASTGSLYLLTQLTMSAYYSLLAIGLCLLMGHAGQISMGHAGFF 64 Query: 75 AIGAYSYVILGSRYGLS-------------------------------IWLLIPVSAMIS 103 AIG Y L + +S W ++ ++ Sbjct: 65 AIGGYLSASLTTHNMVSSAETGWVQGLSSLGLLHAGEDMFGDALLVLAPWPACLMAIAVA 124 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 +++G+P LK +G YLA+ATL I +++ GI L Sbjct: 125 ALVALLLGIPILKLKGHYLAMATLGFGIIVYRLVL-ATEFFGEADGISDVPAFAILPG-- 181 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 + + YY+ + F ++ L R+ + A R I + A S+ Sbjct: 182 -------LSIVGDLDVRVENYYIAAVILFFGFVLLRNLTRSRVGRALRAIHSAEDAADSM 234 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + KL F +S+ F AG I P +++ ++IV +GGM +L Sbjct: 235 GINVAHYKLITFVLSAVFAAFAGVCLTHYNGGIGPSEAGMMKSVRYVAIVAVGGMANLWG 294 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + +L + F + L LV+L + ++ Sbjct: 295 VLTMSMVLNYL----------------SLRGIFGSYDDAVFGTVLVLVMLFAPDGIFSIK 338 >gi|311109058|ref|YP_003981911.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310763747|gb|ADP19196.1| inner-membrane translocator 58 [Achromobacter xylosoxidans A8] Length = 322 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 115/308 (37%), Gaps = 4/308 (1%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 KI+ + +L + + + ++ ++ + LIY + A L +++G ++S Sbjct: 3 RKIIVNTIGLLLFVLVPAIASATGESFLINLMTRFLIYAIAAISLDLILGYGAMVSFGHA 62 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + +G Y I G L + + ++M ++ + + Sbjct: 63 AFFGLGGYVIGIAGFHLAQGDTLFGWSGSNAA----LVMWPLAVASAALAGLVVGFLSLR 118 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + + + G S+ P + YYV L + Sbjct: 119 TSGVQFIMITLAFGQMLYFILVGLMVYGGDDGLSIDARNTLPGLDMNSPTTFYYVCLALM 178 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + + A ++I+ N + L + +L+AF +S+A G+AGA +A Sbjct: 179 TAWVLACRRIVNSPFGMALQSIKQNPRRSIGLGLAPLRYRLTAFVLSAAGTGLAGALWAN 238 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 +SPDM + ++ ++++VILGGM S+ A+ +G+ ++ ++ L Sbjct: 239 YALFVSPDMSAWQKSGELMAMVILGGMGSIFGPVLGVAVYLGLEQVATAWTEHWMLILGP 298 Query: 312 FDCSFNMR 319 + Sbjct: 299 VLVLVVLF 306 >gi|326693762|ref|ZP_08230767.1| ABC-type branched-chain amino acid transport system, permease component [Leuconostoc argentinum KCTC 3773] Length = 323 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 85/341 (24%), Positives = 143/341 (41%), Gaps = 43/341 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 KY LA + +L+ + +Y + + I I V+ A GL++V+G G SL Sbjct: 7 KYALGWAGLAGMIFVLIEVMTIVGVIGQYGLTTLVLIGINVIAAVGLNLVIGMSGQFSLG 66 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 A+GAY+ ++ S L + + ISGA +++G+P+L+ RGDYLAIATL Sbjct: 67 HAGFMAVGAYATALITSAMPNILGFGLSLVIGMGISGAIALLVGIPTLRLRGDYLAIATL 126 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++EI + ++I IT G AGI+ V+ Sbjct: 127 GVAEIIRIVIINL-KITRGPAGIFGIPNFVNWQ-------------------------VV 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G+ + +++ R+ A +RDN+ A SL K+ AF + + +AG Sbjct: 161 FGLSVVVIVLVVNFVRSTTGQAIIAVRDNKIAAASLGINTTKYKVIAFVIGAMLAALAGG 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A+ +SP + F + II++ IV+LGG+ S+S IL + + Sbjct: 221 LRASFIQSVSPQDYTFMQTIIILIIVVLGGIGSMSGTVVTAVILGVLDVVLQNFGP---- 276 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L +V++ R LL S Sbjct: 277 -----------LRMVIYAVVLIVVMIFRPKGLLGTAELSLK 306 >gi|323494090|ref|ZP_08099206.1| putative permease of ABC transporter [Vibrio brasiliensis LMG 20546] gi|323311717|gb|EGA64865.1| putative permease of ABC transporter [Vibrio brasiliensis LMG 20546] Length = 390 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 97/347 (27%), Gaps = 33/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + ++ + + + S+ + L Y M A + +V G LG+LSL Sbjct: 32 LAAIILIPLANTQLPAGHPLHVETFTISLLGKYLSYAMLALAVDLVWGYLGILSLGHGAF 91 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +A+G Y+ + R + LP D A L++ + Sbjct: 92 FALGGYAMGMYLMRQIGDRGVYGNPVLPDFMVFLNWQELPWFWLGFDQFWFAALMVVLVP 151 Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174 + + + + + + + + Sbjct: 152 GALAYVFGYLAFRSRVSGVYLSIITQALTYALMLAFFRNEMGFGGNNGLTDFKDILGYSL 211 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 I ++ S + + + + IRD + + + KL Sbjct: 212 QQDSTRIALFVATGIALIFSYLLCRSVVSSRLGRVSLAIRDTESRTRFMGYDVDGIKLWV 271 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F +S+ G+AGA + I+P F +I ++ V LGG +L ++ Sbjct: 272 FVLSAVIAGVAGALYVPQVGIINPGEFAPLNSIEIVVWVALGGRATLFGAIVGALVINYA 331 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F F + L + ++ Sbjct: 332 KSW--------------FTVEFPEVWLFALGGLFVLSTMYFPKGIIG 364 >gi|229816641|ref|ZP_04446930.1| hypothetical protein COLINT_03690 [Collinsella intestinalis DSM 13280] gi|229807769|gb|EEP43582.1| hypothetical protein COLINT_03690 [Collinsella intestinalis DSM 13280] Length = 293 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 97/305 (31%), Gaps = 24/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ + +Y + A G ++V G +L+ IGAY + S G+ + + Sbjct: 6 QYLVNGLSMGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGAYVSFCVTSYLGMPAIVSV 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + A G+++ + K +A LI + L + G + Sbjct: 66 LAAVAVCTALGILIEGLAYKPLRQAGPLAVLITAIGVSYFLQNAAQLVWGATPKNFTSIV 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F ++ + A ++ + +T + A R ++ Sbjct: 126 SFPVPEFLKAYN----------VSAVSLVTVVACLVIMAGLMWFTGKTKMGKAMRACSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +AG + + P I + + G Sbjct: 176 KAAAQLMGINVNRTISMTFAIGSALAAIAGVLLCSYSPVLQPTT-GSMPGIKAFTAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + + + + F L +V+L++ Sbjct: 235 GIGSIPGAFVGGILLGIIEAMAQAYISTSLANSIVFG-------------VLIVVLLVKP 281 Query: 337 HSLLR 341 L Sbjct: 282 AGLFG 286 >gi|163746733|ref|ZP_02154090.1| inner-membrane translocator [Oceanibulbus indolifex HEL-45] gi|161379847|gb|EDQ04259.1| inner-membrane translocator [Oceanibulbus indolifex HEL-45] Length = 327 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 103/293 (35%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +I ++ + I + GL+I +G GL+S + +G Y+ IL + L+ Sbjct: 28 PFIITLATKAAILALAGVGLNIALGLGGLVSFGHAAFFGLGGYAMGILAAHAQSYTPLME 87 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++ L +L + + I + Sbjct: 88 SPILIEGTKSMPVIWLVALVVSALAALLIGALSLRTSGVYFIMLTLAFGQMLFYFAISWP 147 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + G S+ FP + + + V + + + L R A R N Sbjct: 148 AYGGEDGLSIYVRNGFPGLNTLDPLTFFAVAFAILAVVLFFVGRLARAPFGLALSAARQN 207 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + ++ +L AF +S A G+AGA FA +SP MF + + ++ VILG Sbjct: 208 AERVEAVGLAPFRLRLVAFVISGAVTGLAGALFADLNRFVSPTMFSWQTSGEIMVFVILG 267 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 G+ L A+ I + + G++ ++ L + M+ + Sbjct: 268 GVGRLFGPVAGAALFILLEHVLGGLSEFWHIYLGLLLLLVVLFARGGMIGLIA 320 >gi|163747298|ref|ZP_02154652.1| branched-chain amino acid ABC transporter, permease protein, putative [Oceanibulbus indolifex HEL-45] gi|161379408|gb|EDQ03823.1| branched-chain amino acid ABC transporter, permease protein, putative [Oceanibulbus indolifex HEL-45] Length = 342 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 116/338 (34%), Gaps = 9/338 (2%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + + ++ L++F L K + M Q LI V F GL I VG+ GL+ Sbjct: 6 KQKRLSAWSTPILLIAILVVFTLLVTLLGDKSLARMAAQTLIRVTFVVGLWIFVGNSGLV 65 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S AIGAY L R + L + ++ A Sbjct: 66 SFGHAGYMAIGAYCSAWLTLRPQMKGMFLPDLWPYLATAEWHGFPAAVA--------SGL 117 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L + + + A S + +V Sbjct: 118 LAAVIALISGAAILRLSGIAASIATFAFLAIVYTVYSSWEGVTGATSSVVGLTRYADQWV 177 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 LG ++ W +A A R R+++ A + + +L + VS+ F G+AG Sbjct: 178 TLGWASVTVLAAAWYANSASGLALRASREDEVAADASGINMYGHRLISLVVSAFFAGVAG 237 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A F S ++P+ F I ++++++GG+ SL+ +L ++E M Sbjct: 238 ALFGHSLGVLNPNSFYLGITFITLAMLVVGGIGSLTGAVMGVLVLSIIIEGLVRMERGME 297 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + +I + ++ ++R L R Sbjct: 298 IGETTLALPTGAQEIIIGIIMILVL-ILRPAGLTGGRE 334 >gi|150398066|ref|YP_001328533.1| inner-membrane translocator [Sinorhizobium medicae WSM419] gi|150029581|gb|ABR61698.1| inner-membrane translocator [Sinorhizobium medicae WSM419] Length = 330 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 126/336 (37%), Gaps = 33/336 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + I+ + + L L ++ + + +FA ++++G GLL Sbjct: 10 RKERSPFIVQTVFLGVGLACLLLAPLFFYPVFLMKLL----CFALFACAFNLLLGYTGLL 65 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S + AY +G+ L I V + G ++G +++ +G Y A+ T Sbjct: 66 SFGHAAFFGGAAYFTAHAVKEWGVPPELGILVGVFGAALLGAVIGFFAIRRQGIYFAMIT 125 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++++F ++ ++S+ R ++ MYY Sbjct: 126 LALAQMFYFFCLQSGFTRG--------------EDGIQSVPRGHLLGVIDLLQPTNMYYF 171 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + + +II + + ++IR+N+ SL ++ KL+AF +S+A G+AG Sbjct: 172 VLTVFVIGIAIIWRIINSPFGMVLKSIRENETRAVSLGYSVRNYKLAAFVMSAALTGLAG 231 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A + + + VI + +LGG+ +L +++ + F Sbjct: 232 GLKALVFQFATLTDVSWQMSGEVILMTLLGGIGTLIGPIFGAGLVVTLQNYLATSEFPV- 290 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 T + + + +L+ ++ Sbjct: 291 --------------TIITGVVFMVCVLLFRRGIVGE 312 >gi|332530264|ref|ZP_08406210.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332040250|gb|EGI76630.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 633 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 133/335 (39%), Gaps = 33/335 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 L + AVV+ L L Y + I +LI +FA L ++G G+ Sbjct: 314 PLRRPGPAYLTAAVVFALALVAVPVLAPDSPYTLVLLIDLLIAALFAASLHFIMGPAGMH 373 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S + +GAY +L GL + + + V+ + + ++ G +++ G YLA+ T Sbjct: 374 SFGHSAYFGLGAYGAALLVRASGLPMEVALIVAPVAAALGALVFGWFAVRLSGVYLAMLT 433 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L S+I I +W T G G+ +PS ++ + Y+V Sbjct: 434 LAFSQITWGITYQWDSFTGGSNGLTGV------------------WPSDWLSDKRAYYWV 475 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 L + + + + + A R RD+ ++ + +AF V+ A G+AG Sbjct: 476 TLALVGIGVWWLRRVLFSPFGYALRAGRDSALRADAIGIDAKRMQWTAFVVAGAVAGLAG 535 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A FA S+ ISP+ S+++ + +V+LGG+ +L+ + + Y+ Sbjct: 536 ALFAFSKGSISPESLSVSKSVDGLVMVLLGGIQTLAGPVVGAFTFTWLHDTVARNTDYWR 595 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + +++L+ L Sbjct: 596 A---------------MLGAIILILVLLFPQGLAG 615 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 101/305 (33%), Gaps = 17/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--IWLLI 96 + + + A GLS++ G +++ + +G Y L ++ S W + Sbjct: 10 LLNGLASASSLFLVAAGLSLIFGVTRIVNFAHGSFFMVGIYVAYSLVDKFADSLGFWPAL 69 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V+A++ GA G ++ + L+ + L+ + ++ G + Sbjct: 70 VVAALVVGALGALIEILLLRRIYKAPELFQLLATFALVLVIKDVVLYLWGPDELLGPRAP 129 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + + ++++ + + L L RT R + Sbjct: 130 GLRGA----------VTILGRQFPAYDLFLIVVGPVVLGLVWLLLTRTRFGTLVRAATQD 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + + FA+ + G+ GA +V++G Sbjct: 180 REMVSALGVNQAWLFTAVFALGAFLAGLGGALQLPREPA--TLEMDLHTIGAAFVVVVVG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL A ++ E+ + L SF+ + + + V++ R Sbjct: 238 GMGSLPGAYVAALLIA---EIKAVCIWLGVVDLFGLQISFSKLTLVVDFLVMAAVLVWRP 294 Query: 337 HSLLR 341 L+ Sbjct: 295 WGLMG 299 >gi|160900592|ref|YP_001566174.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160366176|gb|ABX37789.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 332 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 125/302 (41%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G GLLS AY +G + L + Sbjct: 34 FVMKLMCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGYAIKGWGFTPELAMLAGTA 93 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 G+I G +++ +G Y ++ TL ++++ + ++ T G+ G+ R Sbjct: 94 GGALLGLIFGWLAIRRQGIYFSMITLALAQMLFFVCLQAP-FTGGEDGLQGVPR------ 146 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYYV L + L+ +I+ + + I++N+ Sbjct: 147 -------GKLFGLIDLTSDLTMYYVTLVIVVLAFLLIVRTIHSPFGQVLKAIKENEPRAT 199 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+A G+AG+ + ++ + VI + ++GG+ +L Sbjct: 200 SLGYDVARFKLLAFVISAALTGLAGSLKTVVLGFATLSDVHWTTSGHVILMTLMGGLGTL 259 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S +A+++ + + + +++ + T + + + +L+ ++ Sbjct: 260 SGPILGSAVVVMLENKIGEFGSFLQRLTGVEWFSTLGESVTIVTGLIFVVCVLLFRKGIM 319 Query: 341 RL 342 Sbjct: 320 GE 321 >gi|332142256|ref|YP_004427994.1| ABC-type branched-chain amino acid transport system, permease component [Alteromonas macleodii str. 'Deep ecotype'] gi|327552278|gb|AEA98996.1| ABC-type branched-chain amino acid transport system, permease component [Alteromonas macleodii str. 'Deep ecotype'] Length = 392 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 100/348 (28%), Gaps = 33/348 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 L V + L+F Y S+ + L Y + A + +V G G+LSL Sbjct: 26 FLSTAYVTFCNLVFADGALLHVSDYTVSLLGKYLCYALLALAVDLVWGYCGVLSLGHGAF 85 Query: 74 YAIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + +G Y+ + W IP S + ++ + L Sbjct: 86 FTLGGYAMGMYLMRQIGDRGVYGNPDLPDFMVFLNWTEIPWFWAGSSSAIWMVVMVFLGP 145 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG---TTVRSLIRFFRFPS 174 TL + + A + R + F F Sbjct: 146 GLLAFIFGTLAFRSRVSGVYLSIMTQAMTYALMLAFFRNEMGFGGNNGLTDFKEIFSFSL 205 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 ++ ++ + +I ++ + + RD + + K+ Sbjct: 206 QNPSTKLALFVATAIALAVGYAISHFIVSSKMGRVITATRDAESRVRFVGYKPEHYKVWI 265 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F VS+ G+AGA + I+P F +I ++ V +GG +L ++ Sbjct: 266 FVVSAMLAGLAGALYVPQVGIINPGEFSPLNSIEMVVWVAIGGRCTLYGAIIGAIVVSYA 325 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F + LV L+ + L Sbjct: 326 KT--------------RFTAIMPEAWLFALGGLFVLVTLLLPKGIAGL 359 >gi|260459128|ref|ZP_05807383.1| urea ABC transporter, permease protein UrtC [Mesorhizobium opportunistum WSM2075] gi|259034682|gb|EEW35938.1| urea ABC transporter, permease protein UrtC [Mesorhizobium opportunistum WSM2075] Length = 411 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 108/357 (30%), Gaps = 35/357 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGA--TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 R+ IL +A++ PLL A YI ++ + L Y + A L +V G G Sbjct: 14 RIAITIFILLAVAIIVPLLNLAVSPASAFYIPSYIVALTGKYLCYALLALSLDLVWGYCG 73 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +LSL +A+G Y+ + R S + LP D+ Sbjct: 74 ILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPILPDFMVFLNYKELPWFWTGFDHFWF 133 Query: 125 ATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRS 165 A +++ + + + + D + + Sbjct: 134 AAIMVLAVPGLLAFVFGWFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTD 193 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 F ++ M L+ + + + +RD + L Sbjct: 194 FKDILGFNVQADATRSALFAASAVMLALAVFLTWAIVGSKYGKLLMAVRDAESRTRFLGW 253 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 KL AF VS+ G+AGA + I+P F+ S +I V+ +GG ++ Sbjct: 254 RAENVKLFAFTVSAVMAGIAGALYVPQVGIINPGEFEPSNSIEVVIWAAVGGRGTIVGPI 313 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ G+ + V L+ ++ + Sbjct: 314 IGALLVNAGKSWFTGV--------------LPELWLFALGGLFVAVTLLLPKGIVGM 356 >gi|144901325|emb|CAM78189.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense MSR-1] Length = 328 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 107/295 (36%), Gaps = 3/295 (1%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + L + ++ + L + + ++LI + A L +V+G G++S Sbjct: 7 FRRRLAFVVLLILAVAVPPLLSALGHGFYIGFAARVLIMALAALSLDLVMGLGGMVSFGH 66 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +GAY I L ++ + + + + +L + Sbjct: 67 AAFLGLGAYVVGIGSWHVFDGSPLPFGLAGSENALIVWPLAMLVSGLAALGIGAISLRTT 126 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + ++ + G +L + YY+ LG+ Sbjct: 127 GVHFIMITLAFAQM---LFFLAGGLKTYGGDDGITLYNRSELAGLKLSDPTTFYYLCLGL 183 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 +++L L + R +RDN++ +L KL+AF +S G+AGA A Sbjct: 184 LVTVLALLLRLSSSRFGMVLRGVRDNERRMRALGFPTYRYKLAAFVLSGMICGLAGALLA 243 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 + + SP + + + ++ +V+LGGM SL L+ + E + ++ Sbjct: 244 NASEFASPALMSWQRSGELLVMVVLGGMGSLIGPVLGAVALMVLEESLAELTQHW 298 >gi|126732542|ref|ZP_01748340.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] gi|126706988|gb|EBA06056.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] Length = 398 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 126/361 (34%), Gaps = 32/361 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 I+ +L + P +L F + ++ + + +I+ +FA G +I+ G G LS Sbjct: 12 LIIVAILTMCAPFILNPFPADSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSF 71 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +G+YS V + ++I I +S +I+G +++G SL+ G Y +I TL Sbjct: 72 GHAAFLGVGSYSAVWMFKLLSMNILPAIILSVIIAGLFALVIGFVSLRRSGIYFSILTLA 131 Query: 129 MSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 +++ + P G + + + Sbjct: 132 FAQMSFALAYSVLTPITNGETGLQVTLDDPRILGMSATADGSIPVTNLFGLEMRAAYDMA 191 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + YYV + ++ + + + R+ R I+ NQ L Sbjct: 192 VGPWSFTFSAGYYVCAVILLIAFYLSIRIFRSPFGMMLRAIKSNQTRMNYTGLNPKPYTL 251 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 +AF +S + G+AG AA + +++ + V+ + ILGG +L ++ Sbjct: 252 AAFVISGMYAGLAGGLLAAMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGMIK 311 Query: 293 GVVELCCGMNFYYFNSLLKFDCSF-------------NMRHTTLMVIALFLVILMRSHSL 339 + +N + F + + LV++ L Sbjct: 312 YFENIFSKINEATLHGWFDFLPEPLENATVWVLEHFVGAGWHLTLGVIFMLVVIFLPGGL 371 Query: 340 L 340 + Sbjct: 372 V 372 >gi|163855492|ref|YP_001629790.1| putative branched-chain amino acid transport permease [Bordetella petrii DSM 12804] gi|163259220|emb|CAP41520.1| putative branched-chain amino acid transport permease [Bordetella petrii] Length = 329 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 125/303 (41%), Gaps = 11/303 (3%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + ++ ++ L F S+ I +LI+ ++A G +++ G +GLLS Sbjct: 13 ARSTGLVAAVSRHRVLASIAFFCVFPWIMPYQSVAINVLIFGLYALGFNLLFGYMGLLSF 72 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 GAY+ IL S+YG W +P + +S +IMGL +++ RG Y A+ TL Sbjct: 73 GHAAFLGTGAYTAGILISQYGAGWWWAVPAAVAMSAVIALIMGLLAIRTRGIYFAMVTLA 132 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 +S+ + + V ++ + YY +L Sbjct: 133 LSQCVYFFVYQLPASGG-----------ENGLRGVNVAEVSLFGLKLNLLDPMHKYYFIL 181 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 G ++ +++ + + IR+N+ + + +KL F +S+AF G+AGA Sbjct: 182 GFVAIAMAVLSRILASPFGGVIEAIRENESRARACGFDVDRSKLLTFVLSAAFCGLAGAL 241 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A ++ + ++ + +V+ + +LGGM + A+ + + ++ + Sbjct: 242 NAIHLSSVAIETLAYTTSGMVVMLCLLGGMGTYFGPFVGAALFLFIQDVASEYTENWQLY 301 Query: 309 LLK 311 + Sbjct: 302 VGA 304 >gi|118587841|ref|ZP_01545251.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Stappia aggregata IAM 12614] gi|118439463|gb|EAV46094.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Stappia aggregata IAM 12614] Length = 316 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 124/324 (38%), Gaps = 25/324 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88 Y S+ I IY + L++ G GL + Y +GAY+ IL + + Sbjct: 8 FYAVSLLILGGIYAILCLALNVQWGMGGLFNAGIAGFYGVGAYTSAILTTSASSKHLGGF 67 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 GL + L + +A+++G G + ++ + DYLA+A++ ++EI + +++ +TNG Sbjct: 68 GLPVPLGLVGAAILAGLAGWAVARICVRLKSDYLAMASIGIAEILRLVIVNESWLTNGSL 127 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ R T + + +I + + L L + Sbjct: 128 GLSRIPRPLADLT-------------TGRMGDIVFLGFVWFVVLLVYLAASRLHDSPWGR 174 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENI 267 + R IRDN+ + + + ++ F + A +G+AGA A +SP Sbjct: 175 SLRAIRDNEASAAAAGKNVEKFRIQTFVIGCAIMGIAGALSAHYFRFLSPTATDPLLVTF 234 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 +V +++ GG + + + + + + L+ + Sbjct: 235 LVWVMLMAGGSGNNKGAILGALTIWTLWSVTEIFTNRLPPE---WATRSSFIRMLLVGLL 291 Query: 328 LFLVILMRSHSLLRLRTPSNFLER 351 L +V+ LL ++P + Sbjct: 292 LQVVLQRFRSGLLPEKSPPVKFRQ 315 >gi|116617599|ref|YP_817970.1| branched chain amino acid ABC transporter permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096446|gb|ABJ61597.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 292 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 99/303 (32%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y + A G ++V G + L++ Y +GAY L+ ++ + + Sbjct: 8 LINGLMLGSVYALLALGYTMVYGIIKLINFAHGDIYMLGAYFGYFFIKVLHLNFFIALIL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +S G+++ + + IA LI + +L G + Sbjct: 68 AMAVSAIIGVVIEYIAYRPLRHSPRIAVLISALGISFLLENGMTYLYGSDQRSFPQAIKT 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + L + ++ T + A R + + Sbjct: 128 VQYHFYG-----------IQVSNIQLIIAVTSIVLMLLLTYIVKNTKMGRAMRAVSADPD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I FA+ SA G + I P M + + +LGG+ Sbjct: 177 AASLMGININHTISFTFAIGSALAAAGGVLIGLYYNSIDPLM-GMTPGLKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + +F+ ++ L +++L++ Sbjct: 236 GIIPGAAVGGWLIGILETMVQ-------------ATAFSDYKDAIVYAMLIVILLIKPTG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|239814590|ref|YP_002943500.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239801167|gb|ACS18234.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 319 Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 117/278 (42%), Gaps = 18/278 (6%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 S+ ++LIY + A G ++++G GLLS I + +G+Y+ IL +R L + L + + Sbjct: 25 SLASEVLIYALAALGCNLLLGYTGLLSFGQGIFFGLGSYTIAILLTRLSLPMPLALLAAV 84 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + ++G +++ RG Y + TL +++F + +T G G+ R F+ Sbjct: 85 AMGALGAAVVGWVAIRQRGTYFVMLTLAFAQMFYFVAYTASGLTGGDNGLLDVPRPAFMD 144 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 T + Y + M ++ ++L + + IRDN+ Sbjct: 145 TPWK------------------YYAFVAVMFLIAFGLLLRVTDSVFGRTLLAIRDNEDRA 186 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + KL AF +S A G+AG A ++ + +++ I ++GG + Sbjct: 187 AAVGYDLKRFKLLAFVISGAVTGLAGGLHAMMTGIAPLSNAEYHTSEMILVITVIGGTGN 246 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 L +A + + + + + L + ++ Sbjct: 247 LFASVLGSAFYVLLADWLSTLWPRWLLLLGLMLIAVSI 284 >gi|261821761|ref|YP_003259867.1| urea ABC transporter permease [Pectobacterium wasabiae WPP163] gi|261605774|gb|ACX88260.1| urea ABC transporter, permease protein UrtB [Pectobacterium wasabiae WPP163] Length = 539 Score = 89.2 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 83/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ S + +++ + Sbjct: 266 ITYGLLGVINMAHGEMLMLGAYSTWLVQSLCQQFAPTWLAYYPLLALPVAFFITAGVGMA 325 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + Sbjct: 326 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNLEVANPAWLSGGLRLLPNL 383 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+L + + L L +T + R + N+ + AF + Sbjct: 384 VLPYNRIAVILFVLGVLLLTWLLLNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 443 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 444 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 501 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++++ + L I R L + Sbjct: 502 LEPQIGAVLGK-------------IVILLLIVLFIQKRPQGLFAFKGR 536 >gi|255658015|ref|ZP_05403424.1| urea ABC transporter, permease protein UrtC [Mitsuokella multacida DSM 20544] gi|260850218|gb|EEX70225.1| urea ABC transporter, permease protein UrtC [Mitsuokella multacida DSM 20544] Length = 368 Score = 89.2 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 96/336 (28%), Gaps = 27/336 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L+L L + ++ + L Y + A G+ ++ G G+LSL + + +GA Sbjct: 13 LVFILLVLALLTMPFVLTLFRLTLLGKFLCYAIVALGIDLIWGYTGILSLGHGVFFGLGA 72 Query: 79 YSYVIL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 Y+ + GL+ + + + L Sbjct: 73 YAMAMHLKLVASGSSLPEFMVTGGLTQLPAFWKPFASAPFAFLAIIALPLLLALIVGFST 132 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + ++ + + + YY Sbjct: 133 FKNRIKGVYFSILSQALAWAFVTIFVGMQAYTGGSNGITGFTTLLGIQLQNPMNLVSFYY 192 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 V + + ++ WL I IRD + + K + +S+ G+A Sbjct: 193 VAVALLVVTYVFCTWLMSRGIGKILIAIRDGENRTYFTGYDSSRYKTFVYCISAIITGIA 252 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA + ISP + ++ ++ V +GG +L ++ + Sbjct: 253 GAMYVLFAGMISPKELDIAFSVEMVIWVAVGGRGTLIGAVIGALLVNAMKT--------- 303 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + LV+L L+ Sbjct: 304 -----GISETAPDMWLYFIGLLFVLVVLFMPKGLVG 334 >gi|170693586|ref|ZP_02884744.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|170141368|gb|EDT09538.1| inner-membrane translocator [Burkholderia graminis C4D1M] Length = 316 Score = 89.2 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 99/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ +GA + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + ++ I+ ++G + L A + I + Sbjct: 68 PTLCIALAIAAVVCAVVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ M F + + Sbjct: 188 AENPGVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L IL + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|326793438|ref|YP_004311258.1| urea ABC transporter permease [Marinomonas mediterranea MMB-1] gi|326544202|gb|ADZ89422.1| urea ABC transporter, permease protein UrtC [Marinomonas mediterranea MMB-1] Length = 377 Score = 89.2 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 96/348 (27%), Gaps = 33/348 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + LL A Y ++ + L Y M A + I+ G G+LSL Sbjct: 26 LSITVLASAANLLLPQDSALYVSTYSITLLGKYLCYAMLALAVDIIWGYCGILSLGHGAF 85 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +A+G Y+ + R + LP D A L+ + Sbjct: 86 FALGGYAMGMYLMRQIGDRGVYSNPLLPDFMVFLDWKELPWFWLGMDQFWFAMLMAVIVP 145 Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174 + + + + + + + F Sbjct: 146 GLLAFVFGWLAFRSRVTGVYLSIMTQALTYALLLAFFRNEMGFGGNNGLTDFKEILGFDL 205 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + ++ + + + + + + +RD + + K+ Sbjct: 206 QADATRVSLFLITAILLAGIFVLSQRILSSRLGKVTLAVRDAEARTRFIGYRTERYKVWL 265 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F S+ G+AGA + I+P F +I ++ V +GG +L ++ Sbjct: 266 FVYSAVIAGIAGALYVPQVGIINPGEFSPINSIEIVIWVAVGGRGTLIGAIIGALLVNYA 325 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F + LV L L+ L Sbjct: 326 KT--------------RFTAIMPDGWLFALGAMFVLVTLYLPKGLVGL 359 >gi|170738888|ref|YP_001767543.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168193162|gb|ACA15109.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 337 Score = 89.2 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 109/296 (36%), Gaps = 25/296 (8%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ + +LIY ++A G +++ G GLLS + GAY+ I +GL + + Sbjct: 50 ALAVNVLIYGLYATGYNLLYGYTGLLSFGHAAFFGTGAYATGIAIGAFGLHPLAAMALGI 109 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 +++G + +G S++ RG Y A+ TL ++++ ++ T G+ G Sbjct: 110 VLAGLLALAIGALSIRSRGIYFAMVTLALAQLVYYAALQASGWTGGENG----------L 159 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 ++ Y +L + + + + + IR+N+ Sbjct: 160 RGFTVARIGLGPVGLDILDPATKYAFVLACVAAALAAMSRILASPFGAVIEAIRENEARA 219 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + KL AF +S F G+AGA A + D + + + + ++GG + Sbjct: 220 RACGFDVERTKLLAFVLSGLFCGLAGALSALHLSIVPLDSLAYPLSGTAVVMTLVGGAGT 279 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 ++ + + ++ + + L +L Sbjct: 280 FFGPFLGALAVLVLEDSLSLWTSHW---------------QLALGVVFILFVLFLP 320 >gi|297204640|ref|ZP_06922037.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297148747|gb|EDY54741.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 944 Score = 89.2 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 107/324 (33%), Gaps = 24/324 (7%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + LAVV L L + L+ + + +V G G +SL Sbjct: 347 KVRPLPLALAVVTGLSLVSLATPLWADA-----ITTTLVLSLIILSIVVVTGYAGQVSLA 401 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 GA+ + +G L + + + G++ LP+++ RG LAI TL + Sbjct: 402 AYALAGTGAFLAGHAAADWGWPFELALLAGVLGTVPIGLLFALPAVRTRGVNLAIITLGL 461 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + ++ + ++ F S V + V+L Sbjct: 462 GTTLEAMVFQNTDLSTTPG----------SDGIAVGKQTLFGISISGVDHPQRYAAVVLV 511 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + ++ +RR+ +R N++A +L + AKL AF +S+A +AG Sbjct: 512 LFVAATLVVANVRRSRTGRRLIAVRANERAAAALGIDVRAAKLYAFGLSAAIAALAGVLT 571 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + F +I + + ++GG+ L Sbjct: 572 GFRSTSVVLSDFASFGSITALGLAVIGGVGFLVGPLFGATF---------AAGTVGARFG 622 Query: 310 LKFDCSFNMRHTTLMVIALFLVIL 333 + + I L L ++ Sbjct: 623 DLVLPGLSAWMPLIGGIILVLTLV 646 Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 80/276 (28%), Gaps = 13/276 (4%) Query: 53 AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112 A G+ +V G+L+ GAY L ++G++ W + S G++ L Sbjct: 68 AHGIVLVYRGSGVLNFAHGAIGMAGAYVQWELVGQHGVAYWPATACGVLTSAVLGVLTHL 127 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 L+ ++A L+ + +L G + V + Sbjct: 128 LVLRPLRSASSLARLVGTLAVFIVLTAIAVKRYGDS-----------LELVPGRLPTKLL 176 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + +++ ++ + L +RT + +N+ A SL + Sbjct: 177 TIAGATVSEDRVWLIGIAVAVTVLLHLLYKRTLFGLGTSAVAENEGAAASLGWSPDLIAT 236 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 +A+ SA G+ G + + + ++V +S ++ Sbjct: 237 GNWALGSALAGLTGILIVPVIGLSVTGLTTLLLSALAAALVGR--FSSFPVTLTGGLVIG 294 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 V F AL Sbjct: 295 VVQSELTRFGSDVTGLAASVPFLFIALVLVARGRAL 330 >gi|307730748|ref|YP_003907972.1| inner-membrane translocator [Burkholderia sp. CCGE1003] gi|323527111|ref|YP_004229264.1| inner-membrane translocator [Burkholderia sp. CCGE1001] gi|307585283|gb|ADN58681.1| inner-membrane translocator [Burkholderia sp. CCGE1003] gi|323384113|gb|ADX56204.1| inner-membrane translocator [Burkholderia sp. CCGE1001] Length = 316 Score = 89.2 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 99/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ +GA + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + ++ I+ ++G + L A + I + Sbjct: 68 PTLCIALAIAAVVCAVVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ M F + + Sbjct: 188 AENPGVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L IL + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|73542413|ref|YP_296933.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72119826|gb|AAZ62089.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 311 Score = 89.2 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 96/305 (31%), Gaps = 6/305 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G LG+++ IGA + + L Sbjct: 8 IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGALTALSAILGLQKFAPGLPEW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + L + + +A L + ++ + + Sbjct: 68 LTLVIATLIAMPVCAVLAYSIERIAYRPLRNAPRLAPLITAIGVSIILQTAGMLIWSRNP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L S+ ++ + A ++ + RT + A R +NQK Sbjct: 128 LTFPQLLPSEPIDIGSTGATITGKEMVIIGLAVMVMAGLLALVNRTKLGRAMRATAENQK 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + F + + +AG A + M F + + +LGG+ Sbjct: 188 VAGLMGVNPNFVISATFMIGATLAALAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + L G N + + I L V++ R Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTNGVFG-----SNYQDVFAFIVLITVLVFRPSG 301 Query: 339 LLRLR 343 ++ R Sbjct: 302 IMGER 306 >gi|297528881|ref|YP_003670156.1| inner-membrane translocator [Geobacillus sp. C56-T3] gi|297252133|gb|ADI25579.1| inner-membrane translocator [Geobacillus sp. C56-T3] Length = 292 Score = 89.2 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 101/303 (33%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ + +G++ + + + + + Sbjct: 7 LINGISLGSIYALIALGYTMVYGIVRLINFAHGDVFMVGSFVGFYAVTMLHVGFFPALLL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + GMI+ + K + IA LI + ++ G Sbjct: 67 AMASCAVLGMIIERIAYKPLRNAARIAVLITAIGVSLLIEYVTIYLRGAQ---------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ V+ ++L L + + RT I A R + + + Sbjct: 117 PEAYPSTLLPDRNLELFGVVISSQSLFILGTSLVLMILLQFIVHRTKIGKAMRAVSHDAE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + FA+ SA G AG F +I P M + +LGG+ Sbjct: 177 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYTKIDPLM-GILPGLKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + +L + L G+ + + F + L L+++ R Sbjct: 236 GIIPGAMVGGLLLGVIESLVSGLGYSLWRDGAAF-------------VILILILIFRPAG 282 Query: 339 LLR 341 L Sbjct: 283 LFG 285 >gi|114769128|ref|ZP_01446754.1| ABC transporter permease protein [alpha proteobacterium HTCC2255] gi|114550045|gb|EAU52926.1| ABC transporter permease protein [alpha proteobacterium HTCC2255] Length = 326 Score = 89.2 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 115/325 (35%), Gaps = 15/325 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + LL FLG + Y ++ +++I + GL++V+G G +S + IG Sbjct: 9 IICIILLLSVPFLGLILDEPYYITLATKVVILAIAGAGLNLVLGYGGFVSFGHAAFFGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y IL S ++ + +I+ ++ G + + ++ Sbjct: 69 GYVSGILASHALNYYPIIEWPFIIEGTTQMLIILPLAMLISGGFAFLIGMLCLRTSGVYF 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + G S+ FP + + + + I Sbjct: 129 IMITLAFAQMVYYFAISWPAYGGEDGLSVYLRNNFPGLNTMDGFSFFSICFVLLIFVLFI 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I + + A ++ + N + ++ I +L AF +S A G+AGA + +S Sbjct: 189 ISRIVNSNFGLALQSAKQNPERVAAVGIEPIKVQLIAFVISGAITGLAGALYTDLNRFVS 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P + + + ++ VILGG L A+ I + + G+ + Sbjct: 249 PSVLSWHTSGEIMVFVILGGTARLFGPLVGAALFIILEQFLGGITENW------------ 296 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + L +V+L ++ + Sbjct: 297 ---QFWLGFILIIVVLFAKGGIIGM 318 >gi|73540691|ref|YP_295211.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72118104|gb|AAZ60367.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 404 Score = 89.2 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 100/350 (28%), Gaps = 32/350 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + V L+ Y ++ +I+ + + A L +V G G+LSL + Sbjct: 37 LVVAVGVPVCALMVPEGHPLHLSAYALTLIGKIMCFALAAIALDLVWGYCGILSLGHGLF 96 Query: 74 YAIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +A+G Y+ + R + + + G +L Sbjct: 97 FALGGYAMGMYLMRSIGREGVYKSDLPDFMVFLDWKELPWFWHGTEHLWYALLLVVLVPG 156 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSS 175 + + IK ++ + A L F R F + Sbjct: 157 VLAWLFGFFAFRSRIKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRIADFAIA 216 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ + ++ + + +RD + + KL + Sbjct: 217 APQTRTALFVLTFLALIAGFVACRYIVTSKLGRVVTAVRDAEMRVMFSGYNPLGYKLFVW 276 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 S+ G+AGA + I+P +I + V +GG +L ++ G Sbjct: 277 TFSAVLCGVAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPVIGAFLVNGAK 336 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + F L+ LV L ++ L Sbjct: 337 TMFTAY--------------FAEYWLFLLGAMFVLVTLYLPDGVIGLWKR 372 >gi|154243897|ref|YP_001409470.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154163019|gb|ABS70234.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 362 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 80/345 (23%), Positives = 139/345 (40%), Gaps = 19/345 (5%) Query: 1 MSIFSLRLNKYDKILCLLA--VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSI 58 M+IF +R ++ L L+A V PLL + ++ +LI A GL++ Sbjct: 17 MAIFQIREDRIGIRLLLIAAFVAVPLLHAAGVPPFAGDYLFSAVLTPLLILATAAIGLNL 76 Query: 59 VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKF 117 +VG G +SL +GAY+ + L ++ S G++ G+PSL+ Sbjct: 77 LVGYCGQISLGAGAFMGVGAYAAYNVSVHLPGLPLLATFLLAGAASAVVGLVFGIPSLRI 136 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 +G YLA+ATL ++ ITN A V + V Sbjct: 137 KGLYLAVATLAAQFFLDWAFLRVGWITNYSASGSVTAPPLVIAGWH-------------V 183 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + Y ++L + + A L R + W IRD A + + +KL+AFA+ Sbjct: 184 DSPVERYLLVLAVAAIVALGAANLVRGNLGRQWMAIRDMDIAAEIIGIRPMQSKLTAFAI 243 Query: 238 SSAFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 SS +G+AGA +A + P F + ++ IVI+GG+ S+ A + + Sbjct: 244 SSFILGLAGALWAFVNLRAWEPYAFSIDRSFQLLFIVIIGGLGSIIGCFLGAAFIWLLPL 303 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 G+ + S+ + + + + ++ H L R Sbjct: 304 AVEGI--PRWLSIPIAADAAANLTLGVFGALILITLIFEPHGLAR 346 >gi|89069275|ref|ZP_01156638.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] gi|89045151|gb|EAR51219.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] Length = 350 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 128/342 (37%), Gaps = 13/342 (3%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 ++ ++ ++ L+ F I I+++ +++G G++S Sbjct: 9 DRPRSLVLTALLLGVLISLAFAPFLFPGVRSLETAATICIFILLVASYDLLLGYTGIVSF 68 Query: 69 NCVIAYAIGAYSYVILGSR---YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + + +GAY + + ++ L A+ + +++GL SL+ R + A+ Sbjct: 69 AHTMFFGLGAYGVALASTHVGRGWGALALGTLAGALAAAVLALVIGLFSLRVRAIFFAMI 128 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++ ++ + +T G+ G+ + R + +I YY Sbjct: 129 TLAVASAVAVLVSQLYQLTGGEDGLTYRIP-----RELTPAFRLGEVFGVRITGKILNYY 183 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++ C ++L + + + +R+N ++ +++ +++A +S+A +A Sbjct: 184 LIFFCCLALFLLLLRVVNSPFGRVLQAVRENDFRAEAIGYRVVYYRITATCLSAAVAALA 243 Query: 246 GAFFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM--- 301 G+ +A + PD F + ++ +V++GGM ++ I + + Sbjct: 244 GSLYAIWLRYVGPDTTLSFEIMLDILLMVVIGGMGTMYGAVLGAVIFVLAQNYLQNLMGV 303 Query: 302 -NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L + R + + L + ++ Sbjct: 304 AADAATGLPLLPELLDPNRWLLWLGVLFILSVYYFPAGIVGR 345 >gi|146296946|ref|YP_001180717.1| inner-membrane translocator [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410522|gb|ABP67526.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 311 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 70/338 (20%), Positives = 137/338 (40%), Gaps = 42/338 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K + L+ V +++ + + YI I++ ++ A L+++ G G S Sbjct: 1 MKKRFLVYFLIVVAIYVIITVLMKIGVIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60 Query: 68 LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L AIGAY+ + +L + +S +++ CG+I+GLP L+ +GDYLAIAT Sbjct: 61 LGHAGFMAIGAYTTAVLTTLEKPFPFYLTVLISGLLAMCCGLIIGLPVLRLKGDYLAIAT 120 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ + G +GI + Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + ++ +IL + ++ A IR+++ A ++ K+ AF + + F G+AG Sbjct: 157 --VITVITVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + ++ S I PDMF F ++I ++ IV+ + ++ Sbjct: 215 SVYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + ++ L + L +++L R LL + Sbjct: 260 TIISALLQNYPEVRMILYSLILIVIMLFRPQGLLGTKE 297 >gi|326318082|ref|YP_004235754.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374918|gb|ADX47187.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 309 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ IGA + ++ Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGLMQEAMPGAPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + +L F + +A L S ++ + + + + Sbjct: 68 VILLLATIIACVVAAALNFTIEKVAYRPLRSSPRLAPLITAIGMSILLQTLAMIIWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ F + +L AS++ + T + A R +N + Sbjct: 128 --KPYPTLLPTTPFQIGGAVITSTQVLILAVTAISLASLVYLVNYTKLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ M F + + + GG+ Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G LL + I L +++ +R Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGTLTGGLLG-----SNYTDIFAFIVLIIILTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|268325971|emb|CBH39559.1| putative high-affinity branched-chain amino acid transport system, permease protein [uncultured archaeon] Length = 303 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 114/299 (38%), Gaps = 13/299 (4%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 IY++ A GL+++ G + +++ +GAY+ + + GL+ +L+IP++ +I Sbjct: 18 CIYILLAIGLNLIFGVMKVVNFAHGELLMLGAYAIFWIYTYSGLNPYLVIPLAMIILAIV 77 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 G+ + + + + +S + + + Sbjct: 78 GVFIERLCFRPIMGTGKLNEIFLSLGLIYLFQNLAAVFWTTDSRSIHSPYSD-------- 129 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + + +++ ++ L++++ + A R N++A + Sbjct: 130 ---VSITIGSINLPVDYIIIIVITAICLIALQLFMKKATLGRAMRATSQNREAATLMGIN 186 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + + +FA+ SAF AG+ S ++P + I ++VI+GG+ S+ Sbjct: 187 VERMDMLSFALGSAFAATAGSLCLISGQMVNPYVGSI-PAIEAFAVVIIGGLGSIPGAII 245 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 A L + LL + SF+ T+ I L +V+++R + + Sbjct: 246 AGLTLGIAENIVPLFMQSSV-GLLGLEMSFSAWKDTIAFIILIIVLVIRPTGIFGEKEE 303 >gi|209550761|ref|YP_002282678.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536517|gb|ACI56452.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 334 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 121/343 (35%), Gaps = 27/343 (7%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ + RL + L + ++ + + ++ +++ + L +V Sbjct: 5 MNNENGRLQRRRGALARDLIGIAVMTAIAAIGYFAFPDNLALLTRMITIALLVLSLDLVT 64 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G G+ +L + GAY+ IL + Y L++ G++ G L+ G Sbjct: 65 GYCGVATLGHAALFGSGAYAAGILSAHYGINDPLLMMLAGIAGGAIAGLLSGAIILRAHG 124 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 + ++ + +F K T G G+ G F +Y Sbjct: 125 LPQLVLSIALINLFHEFANKASSWTGGSDGLSGIAPDPIFGI------------FEFDLY 172 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 ++ + + + ++ +L R+ R I+ + ++ + A + + +S Sbjct: 173 GQTAFFFGMALLLIVFVLLRFLVRSPFGMLCRGIKQDPLRIRAMGASPKAALIRMYVISG 232 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A G+ GA A S + D F+++ + +++LGG SL T I + + Sbjct: 233 AVAGVGGALNAISTQVVGLDSLSFTQSAEALVMLVLGGTGSLFGALSGTVIFMLFEDYVS 292 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 N +++ T++ L V+L L Sbjct: 293 AANPFHW--------------LTMVGALLIAVVLFAPKGLYGT 321 >gi|302560559|ref|ZP_07312901.1| ribose ABC transporter, permease [Streptomyces griseoflavus Tu4000] gi|302478177|gb|EFL41270.1| ribose ABC transporter, permease [Streptomyces griseoflavus Tu4000] Length = 652 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 103/325 (31%), Gaps = 39/325 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +V + + G + + ++G+Q + + A+G++ V+ S G + L+ Sbjct: 29 ALTALIVLVIAMSALSGDFLTADNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 87 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ A + G+ + L + ++ ACG++ G + ++ Sbjct: 88 ALSATVLAWSATEAGVPVVLAVLLAVATGIACGLVNGFLISYGKLPPFIATLAML----- 142 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 V L + + + ++ +L M + Sbjct: 143 ----------------SVGRGLSLVISQGSPIAFPDSVSHLGDTLGGWLPVPVLVMIVMG 186 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L RT I + I N++A + KL+ +A S F AG A+ Sbjct: 187 LITAFVLGRTYIGRSMYAIGGNEEAARLSGLRVKRQKLAIYAFSGLFAAAAGIVLASRLS 246 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 P + E + ++VI GG S IL + ++ F Sbjct: 247 SAQPQAAQGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSAF--- 303 Query: 310 LKFDCSFNMRHTTLMVIALFLVILM 334 ++ + + L +L Sbjct: 304 ---------WQQVVIGVVIALAVLF 319 >gi|92115978|ref|YP_575707.1| inner-membrane translocator [Nitrobacter hamburgensis X14] gi|91798872|gb|ABE61247.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Nitrobacter hamburgensis X14] Length = 345 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 66/308 (21%), Positives = 123/308 (39%), Gaps = 12/308 (3%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + A +LL L + +I +LIY + L+I+ G G SL Sbjct: 20 QAVTLGTATSIVILLLLLAVPLFFKNFIIFQLTTVLIYGIAVLALNILTGGSGQFSLGHS 79 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 YA+GAY+ IL G++ L +P+S ++ A G + GLP+L+ G YLA+AT ++ Sbjct: 80 AFYALGAYTSAILIEHAGMNYALTLPISGVVCFAMGFLFGLPALRLSGVYLALATFALAV 139 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 +L + G ++ + V + ++YY L + Sbjct: 140 ATPQLL------------KLGVLEPWTGGVQGLTVDKPDAPFGLPVSQDAWLYYFTLVVA 187 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + L + A IRDN+ A ++ + K AF +S+ G+AG A Sbjct: 188 IAIYIASVNLLSSRSGRAMMAIRDNEIAASAMGINVALYKTLAFGISAGITGIAGGLGAI 247 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++PD F I + +++GG+ L A ++ + + ++ ++ Sbjct: 248 AVQYVAPDSFTIQLAIALFLGMVVGGVGWLPGSIVGAAFIVFIPNVAESVSKGLSGAVSG 307 Query: 312 FDCSFNMR 319 + Sbjct: 308 ILLFVVIF 315 >gi|113869594|ref|YP_728083.1| ABC-type transporter, permease component [Ralstonia eutropha H16] gi|113528370|emb|CAJ94715.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 351 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 126/298 (42%), Gaps = 15/298 (5%) Query: 46 ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105 +L + +FA ++++G GLLS + Y+ +G++ + + + Sbjct: 55 VLCFALFACAFNLLIGYTGLLSFGHAAFFGGAGYAAGHAMKVWGVTPEIGLILGTGAGAL 114 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 G ++G +++ +G Y ++ TL ++++ I ++ T G+ G+ R Sbjct: 115 IGYVVGSLAIRRQGIYFSMITLALAQMLFFICLQAP-FTGGEDGLQGIPR---------- 163 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 F + ++ +YYV L + + ++I+ + + I++N+ SL Sbjct: 164 ---GKLFGVLPLSDDLTLYYVALAIIVAAFALIVRTVHSPFGQILKAIKENEPRAISLGY 220 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + KL+AF +S+A G+AG+ A + +S + VI + ++GG+ +LS Sbjct: 221 DVDRFKLTAFVLSAALSGLAGSIKALVLGFETLTDVHWSMSGSVILMTLVGGLGTLSGPI 280 Query: 286 KATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +++ + + + + + + + + T + + + +L ++ Sbjct: 281 VGAFVVVALENKLGDIGNFLASVTGISWFGTLGESVTMVTGVIFVICVLTFRRGIMGE 338 >gi|171060265|ref|YP_001792614.1| inner-membrane translocator [Leptothrix cholodnii SP-6] gi|170777710|gb|ACB35849.1| inner-membrane translocator [Leptothrix cholodnii SP-6] Length = 311 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 119/301 (39%), Gaps = 14/301 (4%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + +++L + +FA ++++G GLLS + AY L YGL+ L + Sbjct: 24 FYPTFLMKVLCFALFASAFNLLLGFAGLLSFGHAAFFGGAAYVCAALSKNYGLTPELAVL 83 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 A ++ G+ +G S++ G Y+ + TL ++++ + ++ T G+ G+ R Sbjct: 84 AGAAVAAVLGLGVGALSIRRSGIYMTMITLALAQLVFFLAVQLP-FTGGEDGLQGVPR-- 140 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 F + I MY+ +L + +I + + IR+N+ Sbjct: 141 -----------GKLFGLIDLNDNIAMYFFVLAVFVAGFWLIRRTVSSPFGQVLKAIRENE 189 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 SL + KL AF +S+A G+AG + S + + V+ + +LGG Sbjct: 190 PRAISLGYDVARYKLLAFVLSAALAGVAGGLKSLVFQLASLTDVHWHMSGEVVLMTLLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + +++ A ++ + + ++ + ++ L + R Sbjct: 250 LGTIAGPAVGALTIVTLENELADKVGSWVTVIMGVIFVVCVLAFRRGLVGEILALRGRRS 309 Query: 338 S 338 Sbjct: 310 G 310 >gi|300313997|ref|YP_003778089.1| urea transport system, permease component protein [Herbaspirillum seropedicae SmR1] gi|300076782|gb|ADJ66181.1| urea transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 111/346 (32%), Gaps = 32/346 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L + LLF A Y ++ + + Y M A L +V G G+LSL + + Sbjct: 24 IVLALLPVCNLLFPAGSALHVSSYTVALVGKFMCYAMAALALDLVWGYTGILSLGHGVFF 83 Query: 75 AIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 A+G Y++ + W P ++ M L L Sbjct: 84 ALGGYAHGMYLMRAIGRDGVYQSDLPDFMVFLNWKAYPWYWWMTDHFWFAMLLVVLVPGL 143 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSF 176 + + A + + R + R F + Sbjct: 144 LAFVFGYFAFRSRIKGVYFSIITQAMTFAFMLLFFRNDTGFGGNNGFTDFKRILGFTITA 203 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 + +Y V LG+ F + + + + + + +RD++ + ++ KL + Sbjct: 204 PATKAVLYLVTLGLLFGALVLCRMIVTSKLGRVLQGVRDSESRLMFIGYNPLWFKLFVWT 263 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S+ G+AGA + I+P + +I ++ +GG +L + G+ Sbjct: 264 LSAVICGIAGALYVPQVGIINPSEMSPANSIEMVIWAAVGGRGTLIGPIIGAFTVNGLKS 323 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F +F + + LV L +L L Sbjct: 324 W--------------FTAAFPDLWLYALGLIFILVTLFLPQGILGL 355 >gi|91977973|ref|YP_570632.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91684429|gb|ABE40731.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 397 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 105/360 (29%), Gaps = 38/360 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFLFL------GATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 L++ I L+ +LL L Y+ S+ + + Y + A + ++ G Sbjct: 10 LDRSATIFLLVLAALGILLPLSNLLLPESSFLHVPTYLISLFGKYVCYAILALSIDLIWG 69 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G+LSL +A+G Y+ + R + LP D Sbjct: 70 YCGILSLGHGAFFALGGYAMGMYLMRQIGDRGVYANPVLPDFMVFLNYKELPWYWTGFDM 129 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162 A L++ + + + + + D + Sbjct: 130 FWFAALMVLVVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + F ++ + + I + + + IRD + Sbjct: 190 LTDFKDILGFNIQADGTRAALFVLSCLALAIGFLICRAVVTSKLGKVLIAIRDAESRTRF 249 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L + KL F +S+ G+AGA + I+P F + +I + V +GG +L Sbjct: 250 LGYRVETYKLFVFTLSACMAGVAGALYVPQVGIINPGEFAPANSIEAVIWVAVGGRGTLV 309 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A ++ + ++ LV L+ ++ Sbjct: 310 GAALGAVVVNYAKTVFTS-------------GPLAPYWLFMLGALFVLVTLLLPKGIIGT 356 >gi|307945421|ref|ZP_07660757.1| putative permease abc transporter protein [Roseibium sp. TrichSKD4] gi|307771294|gb|EFO30519.1| putative permease abc transporter protein [Roseibium sp. TrichSKD4] Length = 313 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 118/325 (36%), Gaps = 29/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L L + +++ +ILI + A L ++G ++S +G Sbjct: 12 VILFLALALVPLYSSVFDDRFVLLFATRILILALAALSLDFILGLGAMVSFGHAAYLGLG 71 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL + W+ PV+ ++S I G SLK RG Y + TL ++ Sbjct: 72 AYAVGILAAHDIWDAWISFPVAILVSAIFAAITGAISLKTRGVYFIMITLAFGQMAYYTA 131 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + R F + + Y ++L + + ++ Sbjct: 132 TSLSAYGG--------------DDGLTMWGRSEFFGTDLFANDTSFYLLVLAILLGAYAL 177 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + + +R N+ +L +L+AF ++ G+AGA A + +S Sbjct: 178 LKRIAASRFGRVLKGVRQNEARLHALGIDPFGYRLAAFVIAGVLAGIAGALMANQTEFVS 237 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P + + +I +V+LGG+ L + + E+ G ++ Sbjct: 238 PAYMSWHRSGELIVMVVLGGLGYLHGAILGAIAYLMLEEVLSGYTQHW------------ 285 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + L LV+L +L L Sbjct: 286 ---RLIFGPLLILVVLYARGGILGL 307 >gi|227824481|ref|ZP_03989313.1| inner-membrane translocator [Acidaminococcus sp. D21] gi|226904980|gb|EEH90898.1| inner-membrane translocator [Acidaminococcus sp. D21] Length = 321 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 95/303 (31%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G L L++ Y +GAY I + + L + + + Sbjct: 37 LINGLSLGSIYALIALGYTMIYGILKLINFAHGDIYMVGAYIGYIATTVFHLPFFPSLLI 96 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + GM++ + + + IA LI + L + Sbjct: 97 AMAGAALVGMLIERVAYRPMRNAPRIAILITAIGVSFFLEN-----------GMILLASP 145 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T S + ++ +L L ++ + T I A R + + Sbjct: 146 QPRTFSSDFAASVYNVGGLVINSQQIIILGSTIVLMLALTYIVNYTKIGKAMRAVSFDAD 205 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I FA+ SA G + I P M + I +LGG+ Sbjct: 206 AARLMGINIDRVISMTFALGSALAAAGGVLVGIYYNSIDPLM-GMAPGIKAFVAAVLGGI 264 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + IL V L G F F L L++L + Sbjct: 265 GIIPGAMVGGIILGIVEALVSGFISSTFRDAAAF-------------AILILILLYKPQG 311 Query: 339 LLR 341 L Sbjct: 312 LFG 314 >gi|207722635|ref|YP_002253071.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206587817|emb|CAQ18399.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] Length = 299 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 120/302 (39%), Gaps = 41/302 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ + + I + A + + + S GLL++ IGAY+ +L + + + Sbjct: 11 YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++G P+L+ G YLA+ATL E+ + +++ + T G G+ +L Sbjct: 70 GMLAPAVVAVVIGRPTLRLSGVYLAMATLGFGEVVRVLILNTENWTGGALGLNGIPQLTE 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L+ ++ +RR+ + A+ I++++ Sbjct: 130 WWH-------------------------VALAVALTLFVLARMRRSKVGRAFEAIKEDET 164 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + KL AF + + G+AGA A I P+ F F + ++++ ILGG Sbjct: 165 AAGLMGINVAGTKLLAFTLGAVIAGLAGALNAHLTFFIGPNEFGFDRGVEILTMTILGGT 224 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L+ + IL + EL + + + L L++L Sbjct: 225 SGLTGPVLGSVILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269 Query: 339 LL 340 + Sbjct: 270 IW 271 >gi|323706037|ref|ZP_08117607.1| inner-membrane translocator [Thermoanaerobacterium xylanolyticum LX-11] gi|323534651|gb|EGB24432.1| inner-membrane translocator [Thermoanaerobacterium xylanolyticum LX-11] Length = 294 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 94/288 (32%), Gaps = 10/288 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GA++ + + L + + Sbjct: 8 LINGLSLGSIYALIALGYTMVYGIMKLINFAHGDIYMVGAFTGFFASTYFHLGFIPSLLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++S G+ + + + D I+ LI + +L G + Sbjct: 68 AMLVSLILGVTIERVAYRPLRDKSKISILITAIGVSLLLEN---------GGIILLSPQV 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F + + + + + + L + +T + A R + + Sbjct: 119 RTYPQIFKQHMYSFFNGIITISNQQIVIFVVSIIMMVGLQLIIYKTKMGKAMRAVSTDPD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA +AG + I P M + +LGG+ Sbjct: 179 AARLMGVNVDRTVSFTFAIGSALAAVAGVLVGIYYNSIDPLM-GIMPGLKAFIAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + ++ + L G + + F + + Sbjct: 238 GIIPGAMVGGLLMGVIEALVSGYGSSLYRDGVSFAILIIILLIKPTGL 285 >gi|91780605|ref|YP_555812.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693265|gb|ABE36462.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 332 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 111/291 (38%), Gaps = 14/291 (4%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +N + + +A+V +++ L T + I+IY + A G + + + G+LS Sbjct: 4 MNIWTQRTFCIAIVLIVVVGFALPWTGVSNSALFLTTMIMIYAIVAQGTNFLYSTAGILS 63 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + + +GAY I RY + + +S ++ G P+ + +G Y AI T Sbjct: 64 VAQGALWGVGAYVAAIGLQRYNIGFGFALLLSIPAGAIVAILTGYPAKRVQGHYFAIVTF 123 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +EIF + T G G+ VA R SF+ Y V Sbjct: 124 AFAEIFVIVGNNAVGWTGGNQGLIVAGRPLAG--------------LSFLSDLQANYLVA 169 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 S + L+R+ + N SL ++ +L AFAVS A G+ G Sbjct: 170 FLCFLGSLIAAVLLQRSGFGTRLAAAKTNSALAVSLGMNVVRDRLIAFAVSGAAAGIGGV 229 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 +A P F I + IV+LGG L +A+ + V Sbjct: 230 LYAYLTRYAQPGSFDVWAGITSLLIVMLGGRGYLLGPFIGSAVTLYVPAAL 280 >gi|50121073|ref|YP_050240.1| putative branched-chain amino acid transport system, permease [Pectobacterium atrosepticum SCRI1043] gi|49611599|emb|CAG75047.1| putative branched-chain amino acid transport system, permease component [Pectobacterium atrosepticum SCRI1043] Length = 524 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 84/288 (29%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ S +P +++ + Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYATWLVQSLCQQFAPAWLPYYPLLALPVAFFITAGVGMA 310 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + Sbjct: 311 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNLEVANPAWLSGGLRLLPNL 368 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+L + + L L +T + R + N+ + AF + Sbjct: 369 VLPYNRIAVILFVLGVLLLTWLLLNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 428 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 429 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 486 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++++ + L I R L + Sbjct: 487 LEPQIGAVLGK-------------IVILVLIVLFIQKRPQGLFAFKGR 521 >gi|33594942|ref|NP_882585.1| putative branched-chain amino acid transport system permease [Bordetella parapertussis 12822] gi|33565018|emb|CAE39967.1| putative branched-chain amino acid transport system permease [Bordetella parapertussis] Length = 354 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 80/343 (23%), Positives = 140/343 (40%), Gaps = 23/343 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + + ++F+ + T S + ++ I L+ + A GL+I+VG Sbjct: 18 QIFPIRQDR------IFIALLMAVIFVVVPLTASDYLLRAILIPFLLLALAAVGLNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY+ G R+ + I + + G+I G+PSL+ RG Sbjct: 72 YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLVAQILLGGCFATLVGVIFGIPSLRIRGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL ++ ++ + F V Sbjct: 132 YLAVATLAAQFFVDWAFLR-------------IPFFTNYSSSGSVSVPPMTFFGLPVQSA 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y ++LG + + L R AI W IRD A + ++AKLSAFAVSS Sbjct: 179 LEKYLLVLGFVVVFTLLAKNLVRGAIGRQWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +G+AGA + P F + + ++ +VI+GG+ S+ A ++ V Sbjct: 239 IVGVAGALWGYVHLGSWEPLAFDLARSFQLLFMVIIGGLGSILGSFFGAAFIVLVPVALT 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L + + + ++ H L RL Sbjct: 299 NV--PHLLGLSLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339 >gi|84387636|ref|ZP_00990653.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein [Vibrio splendidus 12B01] gi|84377481|gb|EAP94347.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein [Vibrio splendidus 12B01] Length = 390 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 98/349 (28%), Gaps = 33/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + ++ + + + + S+ + L Y M A L +V G LG+LSL Sbjct: 23 AILAAVILIPLANTMLPSGHPLHVETFTISLMGKYLSYAMLALALDLVWGYLGILSLGHG 82 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+G Y+ + R + LP D A L++ Sbjct: 83 AFFALGGYAMGMYLMRQIGDRGVYGDPVLPDFMVFLDWSALPWFWQGFDQFWFACLMVVL 142 Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172 + + + + + + + + Sbjct: 143 VPGALAYLFGYLAFRSRVSGVYLSIMTQALTYALMLAFFRNEMGFGGNNGLTDFKDIIGL 202 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 +I ++ LS + + + IRD + + + KL Sbjct: 203 SLQSDAVKIGLFVSTGIALILSYIACRMVVTSRLGRVALAIRDTESRTRFMGYDVDGIKL 262 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 F +S+ G+AGA + I+P F +I ++ V LGG +L I+ Sbjct: 263 WVFVLSAVIAGIAGALYVPQVGIINPGEFAPLNSIEIVVWVALGGRATLFGAIVGALIIN 322 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F F + L + ++ Sbjct: 323 YAKSW--------------FTVEFPEVWLFALGGLFVLSTMYFPQGVIG 357 >gi|94985308|ref|YP_604672.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300] gi|94555589|gb|ABF45503.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Deinococcus geothermalis DSM 11300] Length = 337 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 107/329 (32%), Gaps = 16/329 (4%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-- 85 L I + +Y + A G ++V G L L++ + GA + Sbjct: 3 LATLLPFIVNVIVGGLVLGFVYAIIALGYTMVYGVLQLINFAHSEVFVTGAVVGYEVFRV 62 Query: 86 -----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L + L + + ++SG +++ + + + + LI + IL Sbjct: 63 LAPSPMNGYLKLLLALLAAMVVSGILNVLIERLAYRPLRNAPKLVPLITAIGVSLILQDV 122 Query: 141 KPITNGKAGIYVADRLY-------FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + G G + F ++ V +I +++ Sbjct: 123 LRVIEGFQGRFDLTYTLPAGFSNKFCAAESSCAALGNALRTAGVDLQIKDIILIVVALLS 182 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + RT + A R + ++ + + F + A G++G F Sbjct: 183 LGVLNYLVNRTRLGRAIRAVAQDRVTAGLMGIDANRMISATFLIGGALGGISGVLFGLKV 242 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ++ F I+ + +LGG+ S+ +L + L N + + Sbjct: 243 GTVNAYS-GFDPGIVAFTAAVLGGIGSIPGAVLGGLVLGVIQNLIGVTNVFGQLLGIANL 301 Query: 314 CSFNMRHTTLM-VIALFLVILMRSHSLLR 341 + + + + + L L+++ + LL Sbjct: 302 EAIDASYQRIGAFLVLVLILIFKPTGLLG 330 >gi|268325336|emb|CBH38924.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [uncultured archaeon] Length = 303 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 114/299 (38%), Gaps = 13/299 (4%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 IY++ A GL+++ G + +++ +GAY+ + + GL+ +L+IP++ +I Sbjct: 18 CIYILLAIGLNLIFGVMKVVNFAHGELLMLGAYAIFWIYTYSGLNPYLVIPLAMIILAIV 77 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 G+ + + + + +S + + + Sbjct: 78 GVFIERLCFRPIMGTGKLNEIFLSLGLIYLFQNLAAVFWTTDSRSIHSPYSD-------- 129 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + + +++ ++ L++++ + A R N++A + Sbjct: 130 ---VSITIGSINLPVDYIIIIVITAICLIALQLFMKKATLGRAMRATSQNREAATLMGIN 186 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + + +FA+ SAF AG+ S ++P + I ++VI+GG+ S+ Sbjct: 187 VERMDMLSFALGSAFAATAGSLCLISGQMVNPYVGSI-PAIEAFAVVIIGGLGSIPGAII 245 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 A L + LL + SF+ T+ I L +V+++R + + Sbjct: 246 AGLTLGIAENIVPLFMQSSV-GLLGLEMSFSAWKDTIAFIILIIVLVIRPTGIFGEKEE 303 >gi|91789190|ref|YP_550142.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91698415|gb|ABE45244.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 388 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 142/325 (43%), Gaps = 20/325 (6%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + A S ++ M +L+Y GL++ G G+ + + IG+Y+ +L S Sbjct: 82 VALIAAFHSSHFVLLMLCGVLLYSTACLGLTVQFGYSGVANFAGAAFFGIGSYATAVLAS 141 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + L+I +S + + G ++ LP L+ RG Y A+ T+ +F+ + N Sbjct: 142 HTAIPHALVILISGLSAAVIGSLLILPVLRTRGHYAALVTIAFGILFKTFIE-----VND 196 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G ++ + SL F + + + + L M +++ L R+ + Sbjct: 197 VLGGPQGLQVPGMKLFGLSLNEGFSLFGLEISFYVTYALLSLAMFAGVYALVNALERSWV 256 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 + +R ++ A + I+ K+ AF + + F G+AGA + ++P+ F F ++ Sbjct: 257 GLSMDVVRTDETAASTFGLHIVRWKVIAFTMGNFFAGIAGALYGMIIAFVAPNNFTFGDS 316 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 ++++SIVILGG+ +++ + A I++ + E + Y L Sbjct: 317 LLMLSIVILGGLGNIAGLIPAAIIVLILPEKLQVIQEY---------------RFLLYAA 361 Query: 327 ALFLVILMRSHSLLRLRTPSNFLER 351 + +++L RS LL +T F + Sbjct: 362 LVIVILLFRSQGLLPRKTRIFFARK 386 >gi|27382937|ref|NP_774466.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27356110|dbj|BAC53091.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 339 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 126/300 (42%), Gaps = 16/300 (5%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 +L L + + +I +LIY + L+I+ G G SL YA+GAY+ Sbjct: 31 LVVLAALLIAPVFVKNFIIFQMTMLLIYGLAVLALNILTGGSGQFSLGQSAFYAVGAYTT 90 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IK 139 +L + ++ L +PV+ ++ G + G P+L+ G YLA+AT ++ +L Sbjct: 91 AVLMEHFNINYALTLPVAGVVCFGFGFLFGQPALRLSGVYLALATFALATAMPQLLKLNF 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + T G G+ V G + + +YY L + + Sbjct: 151 LEHWTGGVQGLVVTKPDAPFGLPMSQDMW--------------LYYFTLVVVIAIYIFSV 196 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ A+ IRDN+ A ++ + K AF VS+A G+AG+ A + ++PD Sbjct: 197 NLLRSRSGRAFMAIRDNEIAASAMGVDVALYKTLAFGVSAAITGIAGSLGAIAVQFVAPD 256 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + I + +++GG+ L A +I V + G++ ++ + Sbjct: 257 SYTITLAISLFLGMVVGGVGWLPGSIVGAAFIIFVPNIAEGISKGLSGAVFGVLLFAVIY 316 >gi|323691315|ref|ZP_08105590.1| hypothetical protein HMPREF9475_00452 [Clostridium symbiosum WAL-14673] gi|323504655|gb|EGB20442.1| hypothetical protein HMPREF9475_00452 [Clostridium symbiosum WAL-14673] Length = 296 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 125/305 (40%), Gaps = 33/305 (10%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 YI ++ + I I+ + A L+I+ G G ++ + IGAY+ ++ + WL + Sbjct: 2 SYIITVAVNIAIFALLALSLNIITGYAGQSAMGHAAFFGIGAYTAALMTNAGIS-FWLSL 60 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + +++ A G ++G+ SL+ R D+LAI T+ ++ + + I G+ V Sbjct: 61 PAAMLVTAAAGGLLGVISLRVRDDFLAITTIGINFVMVALFQNM-KIFGASLGMSVTPPT 119 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +F +LL + L+ + + ++ A ++R++ Sbjct: 120 FFGAKMTPMH----------------FLVLLLILIVLTCLLTRKMTKSWFGLALASLRND 163 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A S + K+ AF + +A G+ GA + I F F+ +I ++S+V++G Sbjct: 164 EGAAMSFGINVSQYKILAFILGTAIAGLTGAIYVHRMTFIFSSSFAFTVSISILSMVVVG 223 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ IL E+ Y L L L++ + Sbjct: 224 GIGTIRGPLLGALILGAAPEVLRFAADY---------------RMILYGGILVLMMRFQP 268 Query: 337 HSLLR 341 LL Sbjct: 269 QGLLG 273 >gi|120555909|ref|YP_960260.1| inner-membrane translocator [Marinobacter aquaeolei VT8] gi|120325758|gb|ABM20073.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Marinobacter aquaeolei VT8] Length = 377 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 98/348 (28%), Gaps = 33/348 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 L V + L A Y ++ + L Y + A + +V G LG+LSL Sbjct: 25 FAALALVTFLHLFMPEDSALHVSAYTVTLLGKYLCYALLAVAVDLVWGYLGILSLGHGAF 84 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +A+G Y+ + R + LP D A +++ Sbjct: 85 FALGGYAMGMYLMRQIGDRGVYGDPVLPDFMVFLNWQELPWYWQGFDMAWFAFIMVLLAP 144 Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174 + + + + + + + + F Sbjct: 145 GLLALVFGFLAFRSRVTGVYLSIITQALTFALMLAFFRNEMGFGGNNGLTDFKDILGFDL 204 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + ++ + + + + + RD + L + +L Sbjct: 205 RSDATRLGLFLATGIALAVGYVVCRAIVTSKLGRVSVACRDAEARTRFLGYRVERVQLFV 264 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F VS+ G+AGA + I+P F +I ++ V LGG +L ++ Sbjct: 265 FVVSAMLAGVAGALYVPQVGIINPSEFSPLFSIEIVVWVALGGRATLYGAVIGALLVNYA 324 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + G+ + LV + + L Sbjct: 325 KTVFTGI--------------MPDAWLFALGALFVLVTVFLPKGIAGL 358 >gi|330815028|ref|YP_004358733.1| Putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia gladioli BSR3] gi|327367421|gb|AEA58777.1| Putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia gladioli BSR3] Length = 324 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 125/302 (41%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G GLLS + A Y G + L + Sbjct: 26 FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLATAGYLSGYTIQTLGATPELGVLAGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ + ++ Sbjct: 86 AATVVGLVVGLFAIRRQGIYFAMITLAFAQMLYFVYLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + L+A +I+ + + I++N+ Sbjct: 132 GLQGVPRGRLFGLLDLSSDLALYYVILVVVALAAMLIVRIVHSPFGQVLVAIKENEPRAI 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AG+ + ++ + +VI + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFVLSAALAGLAGSLKVVVLGFETLGDAYWTMSGLVILMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + E + + + +++ S + + I +L ++ Sbjct: 252 FGPLLGAALIVALEERLGDIGSALASLTGVEWFRSLGESTSIVTGIIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|323341216|ref|ZP_08081463.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] gi|323091410|gb|EFZ34035.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] Length = 292 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 98/306 (32%), Gaps = 25/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + LL+ Y +GA+ L + + Sbjct: 8 LINGLSLGSIYALLALGYTMVYGIIKLLNFAHGDVYMLGAFFGYYTIKCLHLGFFGALIS 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ + + K + I LI + L + Sbjct: 68 SMVFCALAGVLVEIIAYKPLLNSPRITMLITAIGVSYFLEN-----------GMTYLFTA 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I+ + V + + L + + +++T + A R + + Sbjct: 117 NTRNFPQVIKRVSYDLGPVQVSNIQLLIFITTIILLILLQVIVQKTKMGRAMRAMAVDPD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I M + I +LGG+ Sbjct: 177 AAALMGINVSGTIAFTFAIGSALAGAAGVLIGMYYNSID-PMMGLTPGIKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A ++ + + + + + L +++L+ Sbjct: 236 GSIPGAAIGGIVIGFLETMFQSIG-------------LSAYKDAAVYAVLIIILLVLPSG 282 Query: 339 LLRLRT 344 L RT Sbjct: 283 LFGKRT 288 >gi|261420416|ref|YP_003254098.1| inner-membrane translocator [Geobacillus sp. Y412MC61] gi|319768082|ref|YP_004133583.1| inner-membrane translocator [Geobacillus sp. Y412MC52] gi|261376873|gb|ACX79616.1| inner-membrane translocator [Geobacillus sp. Y412MC61] gi|317112948|gb|ADU95440.1| inner-membrane translocator [Geobacillus sp. Y412MC52] Length = 292 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 100/303 (33%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ + +G++ + + + + Sbjct: 7 LVNGISLGSIYALIALGYTMVYGIVRLINFAHGDVFMVGSFVGFYAVTMLHVGFVPALLL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + GMI+ + K + IA LI + ++ G Sbjct: 67 AMASCAVLGMIIERIAYKPLRNAARIAVLITAIGVSLLIEYITIYLRGAQ---------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ V+ ++L L + + RT I A R + + + Sbjct: 117 PEAYPSTLLPDRNLELFGVVISSQSLFILGTSLVLMVLLQFIVHRTKIGKAMRAVSHDAE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + FA+ SA G AG F +I P M + +LGG+ Sbjct: 177 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYTKIEPLM-GILPGLKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + +L + L G+ + + F + L L+++ R Sbjct: 236 GIIPGAMVGGLLLGVIESLVSGLGYSLWRDGAAF-------------VILILILIFRPAG 282 Query: 339 LLR 341 L Sbjct: 283 LFG 285 >gi|326331058|ref|ZP_08197356.1| branched-chain amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] gi|325951099|gb|EGD43141.1| branched-chain amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] Length = 345 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 112/303 (36%), Gaps = 27/303 (8%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + + I + +FA L +++G GLLS + AY+ ++ G+ + + A+ Sbjct: 56 VAMDIASWALFAVALDLLLGYCGLLSFGHAAFWGGSAYATGLIAIHLGVPFPVAVLGGAL 115 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + + +G S+K G Y A+ TL +++ I + +T G+ G+ R +F Sbjct: 116 FAMVLAVPIGYLSVKRSGIYFAMVTLAFAQMLFFIANQASSLTGGENGLQGVPRSFFGIE 175 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 V + F YY L + L + + IRDN Sbjct: 176 AVETD-------------SFFFYYAALPIILLGMWAAWRIVHSPFGRVLVAIRDNAPRAR 222 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 +L + KL F +S+ G+AG FA S ++ ++ + V+ + +LGG+ +L Sbjct: 223 ALGYDVERYKLIVFVLSAGLSGLAGGVFAVSHGFVALPELHWATSGEVVLMTVLGGIGTL 282 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ + + F + V+L+ + Sbjct: 283 WGGVIGAGLIVMLADYLASSGFDGIG--------------IVTGAVFVTVVLLFRRGIWG 328 Query: 342 LRT 344 Sbjct: 329 TAR 331 >gi|328952047|ref|YP_004369381.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] gi|328452371|gb|AEB08200.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] Length = 313 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 121/320 (37%), Gaps = 47/320 (14%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 T YI + + + I ++ L++V G +G S+ AIGAY +L Sbjct: 24 AGTLLNLYIQQVLMYVGINIILTLSLNLVNGYMGEFSVGHAGFMAIGAYVASLLTVAVFP 83 Query: 91 SIW------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + W L++ + + + G+++ PS + RGDYLAI TL + I +++L + Sbjct: 84 TAWGPLIFPLVLVIGGLAAALAGLVIAFPSFRTRGDYLAIVTLAFNMIVKSVLENIDAV- 142 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G RL ++ ++ ++ + Sbjct: 143 GGPRGYLGMARLTD-------------------------LTWVVFWVLITLLVLRNFIYS 177 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 IR+++ A + K+ AF +S+ F G+AG +A I+P F Sbjct: 178 NFGRGVLAIREDELAANLVGVNTPRLKIYAFCLSAFFAGVAGGLYAHLLQFINPRSFSIL 237 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 ++ ++ +V LGG+ SL+ A+ ++E+ + + + Sbjct: 238 KSTDMLVMVYLGGVGSLTGSVLGAALYTLLMEVLRPLELWRWVLGPLLLVLL-------- 289 Query: 325 VIALFLVILMRSHSLLRLRT 344 ++ R ++ L+ Sbjct: 290 -------MIFRPTGIMGLKE 302 >gi|146284034|ref|YP_001174187.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145572239|gb|ABP81345.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|327482357|gb|AEA85667.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 359 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 103/341 (30%), Gaps = 27/341 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + L L A Y ++ +IL Y + A L +V G GLLSL + + Sbjct: 26 LAVLVAMPLLHLLPAEHALHVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFF 85 Query: 75 AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 A+G Y+ + W +P + + M L L Sbjct: 86 ALGGYAMGMYLMRQSAGDGLPAFMSFLAWNELPWYWYGTSSFLWAMCLVVLVPGVLAFVF 145 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEI 181 + + AG+ + R + F S Sbjct: 146 GFFAFRSRIKGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTDFKTILGFSISAPATRA 205 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 ++ + + S + L R+ +RD + KL + +S+ Sbjct: 206 TLFLATVALLAGSLYLGFRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFIWTLSAVL 265 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA + I+P +++I V LGG +L ++ G+ Sbjct: 266 CGLAGALYVPQVGIINPSEMAPTQSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW---- 321 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F +F + +V L ++ L Sbjct: 322 ----------FTVAFPEYWLFALGALFIVVTLYLPKGVIGL 352 >gi|71734455|ref|YP_274571.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555008|gb|AAZ34219.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 355 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 16/328 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + F+ + + + ++ I L+ + GL+++ G G LSL A+ Sbjct: 27 IGLWSLLVFAFIAVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ + G+ + L + ++S ++ GLPSL+ +G YL ++TL + + Sbjct: 87 GAFAAYNLQLRVPGMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L ++ TN A + Y + LG+ L Sbjct: 147 VLTRFSWFTNDNASGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLF 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + L R + W +RD A + + AKL AFA+S ++G+AG+ +A A Sbjct: 194 WLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F + + ++ I+I+GG+ S+ A ++ L ++ L+ Sbjct: 254 MVEPHGFDLNRSFQILFIIIIGGLGSVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQ 313 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 N++ L + ++ L RL Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARL 340 >gi|210632506|ref|ZP_03297434.1| hypothetical protein COLSTE_01336 [Collinsella stercoris DSM 13279] gi|210159601|gb|EEA90572.1| hypothetical protein COLSTE_01336 [Collinsella stercoris DSM 13279] Length = 304 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 24/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ + +Y + A G ++V G +L+ IGAY ++ S GL + + Sbjct: 17 QYLVNGLSMGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGAYISFVVTSYMGLPAIVSV 76 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + A G+++ + K +A LI + L + G + Sbjct: 77 IAAVAVCTALGILIEGLAYKPLRQAGPLAVLITAIGVSYFLQNAAQLIWGATPKNFTSIV 136 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F ++ + A ++ + +T + A R + ++ Sbjct: 137 SFPVPAFLKAYN----------VSAVSLVTVIACLLIMAGLMWFTGKTKMGKAMRAVSED 186 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +AG + + P I + + G Sbjct: 187 KAAAQLMGINVNRTISMTFAIGSALAAIAGVLLCSYSPVLQPTT-GSMPGIKAFTAAVFG 245 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + + + + F L +V+L++ Sbjct: 246 GIGSIPGAFVGGILLGIIEAMAQAYISTSLANSIVFG-------------VLIVVLLVKP 292 Query: 337 HSLLR 341 L Sbjct: 293 AGLFG 297 >gi|209515450|ref|ZP_03264316.1| inner-membrane translocator [Burkholderia sp. H160] gi|209504170|gb|EEA04160.1| inner-membrane translocator [Burkholderia sp. H160] Length = 337 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 115/297 (38%), Gaps = 12/297 (4%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 + + LGA + ++ I +FA L +++G G++SL + +GAYS Sbjct: 33 VIFWIVALGACLMPLNNYLLLNEMAILALFAVSLDLILGYTGIVSLGHAAFFGLGAYSAA 92 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L + L L + +S ++ G++ + ++ + TL ++ I + K Sbjct: 93 LLAKYFNLDPLLGMLLSCGVAAFAGLVTSVLVMRGSDLTRLMVTLGVASILHELANKLNW 152 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ + G F ++ Y + F+ + + Sbjct: 153 LTGGADGMTGVPMVPLFG------------HLEFDLFGKVAYTYSIVTLFVLFVVARAVV 200 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ + + IR N ++ + + + + +S+A+ G+AGA A + S D+ Sbjct: 201 KSPFGMSLQVIRQNPLRAAAMGVPVNLRRTAVYTLSAAYAGVAGALLAQTTGFASLDVLD 260 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F + V+ ++++GG L + + + + Y+ + + Sbjct: 261 FHRSADVLLMLMIGGAGYLYGGIIGAVVFRFMQDRLADITPQYWQFWIGLLLVIIVI 317 >gi|90419100|ref|ZP_01227011.1| permease protein, ABC-type branched-chain amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337180|gb|EAS50885.1| permease protein, ABC-type branched-chain amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 335 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 128/334 (38%), Gaps = 33/334 (9%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + + ++ L +I S+ + +FA ++++G +GLLS Sbjct: 28 QRDLSTIGFVLAGIAVVGLLVAPFYVYPVFIMSVL----CFALFATAFNLLLGYVGLLSF 83 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + AY +G I + A +G G+++G +++ +G Y A+ TL Sbjct: 84 GHAAFFGGAAYFTAHAAKVWGWEPLSAILLGAGGAGLIGLLVGYLAIRRQGIYFAMVTLA 143 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 +S++ I ++ ++ + R + + + +YY +L Sbjct: 144 LSQMIFFIFLQA--------------PFTHGEDGIQGVPRGYLLGVVNLNDPLNIYYFVL 189 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + + + + + IR+N+ SL + KL AF +S+A G+AG+ Sbjct: 190 AIFLFGFFAVWRIVHSPFGHVLKAIRENENRTISLGYRVERYKLGAFVMSAAIAGLAGST 249 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A + + + V+ + +LGGM ++ A A+++ + M+F Sbjct: 250 KAIVFQIATLTDVAWQMSGEVVLMTLLGGMGTIFGPAIGAALVVTMQHYFASMDFPV--- 306 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 T ++ I L +L+ ++ Sbjct: 307 ------------TVMIGIIFVLCVLLFRRGIVGE 328 >gi|307151250|ref|YP_003886634.1| urea ABC transporter permease UrtC [Cyanothece sp. PCC 7822] gi|306981478|gb|ADN13359.1| urea ABC transporter, permease protein UrtC [Cyanothece sp. PCC 7822] Length = 385 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 99/351 (28%), Gaps = 29/351 (8%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ + +L + L+ L ++ + + L + A G+ ++ G GL Sbjct: 13 VKKRQRQFLLEGAIIGGVALILALLMPFILSQFRLKLLGRFLSLCLAALGIDLIWGYTGL 72 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LSL I +A+G Y + + + L + + F I Sbjct: 73 LSLGHGIFFALGGYGLAMYLNLQLPAGQLPEFFTLYGVTKLPLFWQPFHSLFFTVIAIIV 132 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--------------FFR 171 + LI I I L + F Sbjct: 133 IPSLVAGLLGYLIFRNRIKGVYFSILTQAALLVFFNFFNGQQQLINGTNGLKTDTQTLFG 192 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 ++ Y + + L + WL + IRD++ K Sbjct: 193 ALVGSDGVQLVFYELTILCLILVYLLCRWLTSGRFGRLLKAIRDDEIRVRFSGYDPTGFK 252 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 + FA+S A G++GA + I + + +I ++ V +GG +L T + Sbjct: 253 VVVFAISGAIAGISGALYTVQSGIIAPSPSLEVAFSIEMVIWVAVGGRGTLIGAIVGTLL 312 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + F +V+ + ++ Sbjct: 313 VNWGKTFLSE--------------QFPEIWLFFQGALFLIVVTVLPAGIIG 349 >gi|209518081|ref|ZP_03266911.1| inner-membrane translocator [Burkholderia sp. H160] gi|209501487|gb|EEA01513.1| inner-membrane translocator [Burkholderia sp. H160] Length = 352 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 75/326 (23%), Positives = 139/326 (42%), Gaps = 18/326 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V L+ F+ + + +++++ + +LI + GL+ + G G LSL ++GAY Sbjct: 22 VSLVLVAFVAVPLVSNDYWLNAILVPLLILSLAGLGLNFLTGYAGQLSLGSAAFMSVGAY 81 Query: 80 SYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + +L L + + + + ++SGA G++ GLPSL+ RG YL ++TL I Sbjct: 82 AAYNLLVRLPALPLPVALLLGGLVSGAVGVLFGLPSLRIRGFYLIVSTLAAQFFVVWIFT 141 Query: 139 KWKPI-TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + N +G+ A RL + + Y +LG+ + + Sbjct: 142 RVSWFSNNDTSGVLSAPRLVIGHWQIDT--------------PAARYLFVLGVVVVLFLL 187 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRI 256 + R+ + W +RD A + + +KL AFA+SS +G+AGA +A A + Sbjct: 188 GAGVVRSDLGRRWMAVRDMDIAARVIGIPVGQSKLLAFALSSFVLGIAGALWAFAYLGTV 247 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 PD F + + V+ I+I+GGM S+S A ++ + L + Sbjct: 248 EPDGFSLNLSFQVLFIIIIGGMGSISGNLYGAAFIVLLPVLLSNAATALAQIGIG-ADQL 306 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 + + ++ L RL Sbjct: 307 QNLQKIIFGTLIIAFLIKEPDGLARL 332 >gi|114707738|ref|ZP_01440632.1| ABC transporter, membrane spanning protein [Fulvimarina pelagi HTCC2506] gi|114536727|gb|EAU39857.1| ABC transporter, membrane spanning protein [Fulvimarina pelagi HTCC2506] Length = 382 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 99/344 (28%), Gaps = 30/344 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +A L++ Y + + L M A L++ G+ G+L+L + Sbjct: 9 FLSIAAFAALIVLAVPLFFGFDGYELNTFARYLCLGMVAMALALSWGTAGILNLGQAAPF 68 Query: 75 AIGAYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +GAY + S G + ++ L A + Sbjct: 69 GLGAYIMAMHLKLMNSTSMPGGMPDFMGWMNIETLPWFWQPFHSLGFTLLAGLLFPAAMA 128 Query: 129 M----------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 +I + + + L F + Sbjct: 129 FAIGAFIFKGRVSGVFVAIITLAVLVAIQLLFVEEQGYTGGQNGLTGLALLTIFGVTIDN 188 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 Y + YY++ + + L R+ R +R++ L + ++ F+VS Sbjct: 189 YSLNFYYLVAASLLIVTVLATMLSRSKAGLVLRAVREDPNRARFLGYDVSNYEILVFSVS 248 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 +A G AG + SP S ++ ++ +GG SL A ++ + Sbjct: 249 AAIAGFAGMLYTLVLQFASPTYMSVSFSLSIVIWCAVGGRESLIGAAIGAIVVNMLEGRL 308 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F ++ + ++L L L Sbjct: 309 SDV--------------FVEAWLMVLGVLFIAIVLFLPRGLYGL 338 >gi|91976806|ref|YP_569465.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91683262|gb|ABE39564.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 324 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 114/341 (33%), Gaps = 32/341 (9%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + + ++A ++ + T + +Q L + + A ++++G Sbjct: 7 NSVPTPTTRRPMRDEMIAFALMTIVLAVVPFTGVYPFFV---MQGLCFALLACAFNLLIG 63 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 GLLS + Y + L L I + +I GL +++ +G Y Sbjct: 64 YGGLLSFGHAMFLGTAGYVSAHALKVWELPPELAIVAGTAAAFGLSVITGLIAIRRQGIY 123 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 A+ TL +S++ I ++ ++ + + F + Sbjct: 124 FAMITLALSQLLYFIYLQA--------------PFTHGEDGIQGIPQGKMFGVIDLQNTT 169 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +Y+V+L L II + + IR+N+ SL KL AF +S Sbjct: 170 TLYFVVLAGFLLGFLIIYRAINSPFGEVLKAIRENEPRAISLGYKTDHYKLMAFILSGTL 229 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G AGA S +S + ++ + ++GG+ ++ ++I + + G Sbjct: 230 AGFAGALKVFVAQNASLTDVHWSMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGF 289 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 290 ---------------GQWVTVIQGVIFVACVLTFRRGIVGE 315 >gi|253688545|ref|YP_003017735.1| urea ABC transporter, permease protein UrtB [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755123|gb|ACT13199.1| urea ABC transporter, permease protein UrtB [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 539 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 35/288 (12%), Positives = 84/288 (29%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ S + +++ + Sbjct: 266 ITYGLLGVINMAHGEMLMLGAYATWLVQSLCQQFAPGWLAYYPLLALPVAFFITAGVGMA 325 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + S + Sbjct: 326 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNLEVANPAWLSGGLRVLSNL 383 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+L + + + L +T + R + N+ + AF + Sbjct: 384 VLPYNRIAVILFVLGVLLLTWILLNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 443 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 444 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 501 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++++ + L I R L + Sbjct: 502 LEPQIGAVLGK-------------IVILVLIVLFIQKRPQGLFAFKGR 536 >gi|114707762|ref|ZP_01440656.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Fulvimarina pelagi HTCC2506] gi|114536751|gb|EAU39881.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Fulvimarina pelagi HTCC2506] Length = 312 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 128/325 (39%), Gaps = 34/325 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + L+ F+ L Y Y + A S++VG +G +S +G Sbjct: 9 IIGAALLVAFVLLPFAGLSDYWTYTVTIGFYYALLAASWSLLVGYVGRISFAQAAMSGLG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ + +GL I L + +A+I+G G ++G +L+ G YL + T+ EI + + Sbjct: 69 GYASALGVLEFGLPIGLGLVFAALIAGLVGYVLGWLTLRLHGAYLGLTTIAFGEILRISV 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +T G G+ V + YY+ L + + Sbjct: 129 TAEHWLTEGSLGLQVPP-------------------LIPGGSRLEYYYIFLAITVGCLAA 169 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ I +++IR+++ SL + K AFA+SSAF G+AG +A I+ Sbjct: 170 MGLLLRSRIGLFFQSIREDEDGAASLGVAVTTWKCVAFAISSAFAGLAGGLYAHFVQLIA 229 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P M E +++++ ++GG ++ A +L ++E + Sbjct: 230 PSMMSLQEMGVILAMAVIGGFHNILYAALGGMLLQVLLEALREVE--------------- 274 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + + LV+ + L + Sbjct: 275 QWRLVVFGLVTILVLRFAPNGLFGM 299 >gi|209515793|ref|ZP_03264656.1| inner-membrane translocator [Burkholderia sp. H160] gi|209503820|gb|EEA03813.1| inner-membrane translocator [Burkholderia sp. H160] Length = 324 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 122/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G S L + Sbjct: 27 FVMKVLCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYLTGYAMQTLGFSPELGVVSGTA 86 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++G +++ +G Y A+ TL ++++ + ++ Sbjct: 87 AATLLGLVVGFFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 132 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +Y+V+L + + +I+ + + I++N+ Sbjct: 133 GLQGVPRGKLFGLLDLSSDVALYFVVLAVIVAAFLLIVRIVHSPFGQVLVAIKENEPRAV 192 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + + ++ + +VI + ++GGM +L Sbjct: 193 SLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVQGFETLSDAYWTMSGLVILMTLVGGMGTL 252 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + S T + + +L ++ Sbjct: 253 FGPLLGAALIVSLEDRLGDIGSALASVTGIDWFRSLGESVTIVTGLIFIACVLAFRRGIV 312 Query: 341 RL 342 Sbjct: 313 GE 314 >gi|170699012|ref|ZP_02890069.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|170136048|gb|EDT04319.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] Length = 324 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 123/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + V Sbjct: 26 FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLATAGYGTGYTIQTLGFTPELGVLVGTF 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+I+GL +++ +G Y A+ TL +++ I ++ Sbjct: 86 AATLLGLIVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + + + I+ + + I++N+ Sbjct: 132 GLQGVPRGHLFGLVDLSNDVALYYVVLAVIVAACAFIVRIVHSPFGQVLVAIKENEARAI 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVLVLGFETLSDAHWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + + S T + + +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASVTGIGWFHSLGESTTIVTGLIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|158423384|ref|YP_001524676.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158330273|dbj|BAF87758.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 374 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 105/360 (29%), Gaps = 39/360 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFL------FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 L++ I +L + +L+ Y+ + + L Y + A + +V G Sbjct: 7 LDRRGAIFIILVLAAGVLVPAGNLLAPVGSPFHVSDYLVPLLGKYLCYALLAVAVDLVWG 66 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G+LSL +A+G Y+ + R + LP ++ Sbjct: 67 YCGVLSLGHGAFFALGGYAMGMYLMRQIGPRGVYGNPVLPDFMVFLNYKELPWFWLGFNH 126 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162 A L++ + + + + D + Sbjct: 127 FPFAALMVLVVPGLLAFAFGWFAFRSRVTGVYLSIITQAMTFALMLAFFRNDMGFGGNNG 186 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + +++ L I L + +RD + Sbjct: 187 LTDFKDILGYSITAGTTRGALFFASAVALVLGYLICRALVVSKYGKVLVAVRDAESRTRF 246 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L + KL A+ +S+ G+AGA + I+P F + +I + V +GG +L Sbjct: 247 LGYKVANYKLVAWTLSAMLAGVAGALYVPQVGIINPGEFAPANSIETVIWVAVGGRGTLV 306 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A ++ F + + +V L ++ L Sbjct: 307 GAALGALVV--------------NAGKTWFTGALPEAWLFALGALFVVVTLFLPRGIIGL 352 >gi|170694303|ref|ZP_02885457.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|170140726|gb|EDT08900.1| inner-membrane translocator [Burkholderia graminis C4D1M] Length = 323 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 124/302 (41%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G GLLS + A Y G S L + Sbjct: 26 FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYVTGYAMQTLGFSPELGVLAGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G ++G+ +++ +G Y A+ TL ++++ + ++ Sbjct: 86 CATLLGFVVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +Y+V+L + L+ +I+ + + I++N+ Sbjct: 132 GLQGVPRGKLFGVLDLSSDVALYFVVLAIMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVVVQGFETLSDAYWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + +++ S T + + +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDIGSALASTTGVEWFRSLGESVTIVTGVIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|320527722|ref|ZP_08028892.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Solobacterium moorei F0204] gi|320131887|gb|EFW24447.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Solobacterium moorei F0204] Length = 291 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 99/303 (32%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A G ++V G L++ +GAY I +GL WL + + Sbjct: 8 FINGLNIGSIYALIALGYTMVYGIAKLINFAHGDVIMVGAYISFISMK-FGLPWWLAVII 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G++M + K + I+ LI + +L + G + Sbjct: 67 SIVVCAVLGVVMEKVAYKPLRNASRISLLITAIGISYLLQNLFQLIFGANPQPYHAFIA- 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + Y L + L++ +T + A R + +++ Sbjct: 126 ----------LPALNLGGITIQANYYITFSVSVLLMILLTLFVNKTTMGKAMRAVSEDEG 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ A +AG +A I+P I +LGG+ Sbjct: 176 AAKLMGINVDTTISLTFAIGCALAAIAGILYANCYPMINPT-LGSLPGIKAFIAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL + + ++ L L+++ + Sbjct: 235 GSIPGAVIGAFILGMIEAMTKAYISSQLTDT-------------IVFAILILMLVFKPAG 281 Query: 339 LLR 341 +L Sbjct: 282 ILG 284 >gi|300311945|ref|YP_003776037.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300074730|gb|ADJ64129.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 401 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 91/334 (27%), Gaps = 36/334 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + ++ + L Y A GL + G G+LSL + + +G Y + Sbjct: 29 FPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGYGGILSLGQGVFFGLGGYCMAMFLKLEAS 88 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF----------------- 133 S + +L + + + Sbjct: 89 DPISTKIQSTPGIPDFMDWNQITALPAMWEPFHSFAFTIFAVLAVPTVLAMLIGMAMFKR 148 Query: 134 -----QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 ++ I L + L + ++ +Y+V Sbjct: 149 RVGDVYFSIVTQAIAAILSILIIGQQGLTGGVNGITDLKTLMGWDIRTDHAKLVLYFVNA 208 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 G+ F ++ + + +RD ++ + K+ F ++ F + GA Sbjct: 209 GLLFGCILFGRYVLGSKLGRLLVAMRDKEERVRFSGYDVASFKVFVFCAAAMFSAIGGAM 268 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 F +SP +I ++ +GG SL T ++ Sbjct: 269 FTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGTLLVNFGKTY----------- 317 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F +F LM V++ + L L Sbjct: 318 ---FSETFPELWLFLMGGLFIAVVMYFPNGLAGL 348 >gi|291449780|ref|ZP_06589170.1| predicted protein [Streptomyces albus J1074] gi|291352729|gb|EFE79631.1| predicted protein [Streptomyces albus J1074] Length = 698 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 26/326 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A + L + L Y S+ L + A ++++ G GL +L +A+G Sbjct: 360 AAPLLVLCVALVALPGLLDAYTISLAGSALALGLLAVSVTVLTGYAGLPTLGQTAPFAVG 419 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ L + + I +SA+ + + G ++ RG + + TL + E+ + Sbjct: 420 AYTTANLAAAGWTVGPVQILLSALAAAVFSAVTGPAVIRARGTTVLMITLAVGELTSAAV 479 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + K +T G G+ L + + E +Y L + ++ + Sbjct: 480 NQLKSVTGGADGLVGFPATQAL------------WGGEDLFEESELYTYALVVAAVAVAA 527 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L + R+ R + + + L A+ + A G+ G+ + +S Sbjct: 528 TLLVLRSPAGKLLTGARGAEARMRASGHPVWRYLLVAYIGAGALAGVGGSVMVTVQQYLS 587 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + ++GG TS+ +++ + G + Sbjct: 588 PADVGFEIAAFALLAAVIGGTTSVVGALFGAGLIVATRDWVAGAWPGHGP---------- 637 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343 L+ + + + L LR Sbjct: 638 ----LLLGVLFVAAVYLLPRGLAGLR 659 >gi|153809785|ref|ZP_01962453.1| hypothetical protein RUMOBE_00166 [Ruminococcus obeum ATCC 29174] gi|149833963|gb|EDM89043.1| hypothetical protein RUMOBE_00166 [Ruminococcus obeum ATCC 29174] Length = 294 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 99/306 (32%), Gaps = 24/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ IY + A G ++V G +L+ +GAY + +R G+S L + Sbjct: 5 SYLKDGISLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVILTAVTRGGMSPVLAV 64 Query: 97 PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +S + G+++ + R +A LI + +L + G Sbjct: 65 GLSVIFCTVLGVVIEKVAYSPLRKASSNLAVLITAIGVSYLLQNLALLIFGADAKSFVTV 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + T+ + + + +L + + L++++T A + + Sbjct: 125 VDVPSVTLFN---------GELTIKGITIVTILACVVIMVGLTLFVKKTKPGRAMLAVSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + FA+ S +AG + ++P I + Sbjct: 176 DRDAAQLMGVNVNATISLTFAIGSGLAAIAGLLLCQTYPTLTPYT-GAMPGIKAFVAAVF 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ +L + + F L +V+L++ Sbjct: 235 GGIGSIPGAMVGGILLGVIEIFGKAYISSQVADAICF-------------AVLIVVLLVK 281 Query: 336 SHSLLR 341 L Sbjct: 282 PTGLFG 287 >gi|163858069|ref|YP_001632367.1| branched chain amino acid ABC transporter permease [Bordetella petrii DSM 12804] gi|163261797|emb|CAP44099.1| Branched-chain amino acid transport system, permease component [Bordetella petrii] Length = 317 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 128/293 (43%), Gaps = 14/293 (4%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 F + + S + +I+ + A L+ ++G GL +L +GAY+ V L Sbjct: 2 FPLVAPELGLDFYVSFVRRAMIFAIAAASLNFILGFGGLPALGHAGFLGVGAYTVVALAD 61 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 S W+L P++ + +G C ++GL L+ RG YL ++TL +++ + + + G Sbjct: 62 AGLGSAWILWPLAMVAAGFCAFLIGLVVLRTRGVYLIMSTLAFAQMLYYVAVSLRA-YGG 120 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G + R + + E Y+V+L + L + + + Sbjct: 121 DDGYTLQARPVIF-------------DAIPLGNEATFYWVVLLLFGLVMAFLNRSSVSRF 167 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 +A IRDN+ +L + L+AF +S A +G++GA AA + +SP M ++++ Sbjct: 168 GHALMGIRDNETRMRALGYPVSRLLLAAFVISGACMGLSGALLAAHNNFVSPSMMHWTQS 227 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 +++ +V++GG A I + E+C + Y+ L + Sbjct: 228 AVLLVMVVIGGAGLRWGGALGAIAWIVLEEVCKQLTGYWHLPLGLLLLAIVFL 280 >gi|167818029|ref|ZP_02449709.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia pseudomallei 91] gi|167826392|ref|ZP_02457863.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia pseudomallei 9] gi|226193315|ref|ZP_03788925.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|254186507|ref|ZP_04893024.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254194755|ref|ZP_04901186.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254298685|ref|ZP_04966136.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157808482|gb|EDO85652.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157934192|gb|EDO89862.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|169651505|gb|EDS84198.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|225934915|gb|EEH30892.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] Length = 324 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 121/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + Sbjct: 26 FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGVLAGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 86 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + + I+ + + I++N+ Sbjct: 132 GLQGVPRGRLFGLVDLSSDLALYYVVLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAI 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AGA + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSATLAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + S T + + + +L ++ Sbjct: 252 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|134293030|ref|YP_001116766.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|161521296|ref|YP_001584723.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|134136187|gb|ABO57301.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia vietnamiensis G4] gi|160345346|gb|ABX18431.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] Length = 317 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ +GA + Sbjct: 9 VINGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSCIGLLQNHFPDLGSV 68 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + ++ + +G + L A + I + Sbjct: 69 PTLCIALSAAAVVCAAVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 128 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + A ++L + +T + A R I Sbjct: 129 LAFPQLLPTDPINVIKATDTTPGAVISMTEIVIVVVAFLVMAGLLLLVHKTKLGRAMRAI 188 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ M F + + Sbjct: 189 AENPGVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 247 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L IL + +L G + + I L +V++ Sbjct: 248 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 302 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 303 FRPSGLLGER 312 >gi|83749708|ref|ZP_00946687.1| LivM [Ralstonia solanacearum UW551] gi|207738527|ref|YP_002256920.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83723633|gb|EAP70832.1| LivM [Ralstonia solanacearum UW551] gi|206591895|emb|CAQ58801.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 299 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 120/302 (39%), Gaps = 41/302 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ + + I + A + + + S GLL++ IGAY+ +L + + + Sbjct: 11 YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+G P+L+ G YLA+ATL E+ + +++ + T G G+ +L Sbjct: 70 GMLAPAVVAVIIGRPTLRLSGVYLAMATLGFGEVVRVLILNTENWTGGALGLNGIPQLTE 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L+ ++ +RR+ + A+ I++++ Sbjct: 130 WWH-------------------------VALAVALTLFVLARMRRSKVGRAFEAIKEDET 164 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + KL AF + + G+AGA A I P+ F F + ++++ ILGG Sbjct: 165 AAGLMGINVAGTKLLAFTLGAVIAGLAGALNAHLTFFIGPNEFGFDRGVEILTMTILGGT 224 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L+ + IL + EL + + + L L++L Sbjct: 225 SGLTGPVLGSVILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269 Query: 339 LL 340 + Sbjct: 270 IW 271 >gi|150019851|ref|YP_001312105.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] gi|149906316|gb|ABR37149.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] Length = 291 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 95/289 (32%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G + L++ Y IGA+S S L + + V Sbjct: 7 IINGLALGSVYALLALGYTMVYGIIQLINFAHGEIYMIGAFSGFYCASTLKLPLIPTLLV 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +S G+I+ + K + IA LI + L + G Sbjct: 67 AMAVSALSGIIIEKIAYKPLRNSPRIALLITAIGVSLFLQNAMRLLVGSNPKP------- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 LI + +I + FL + + +T + A R + + Sbjct: 120 ----FPDLINAGSINIGTIQIDIKTILMFGVSAFLVVLLQFIVYKTKVGKAMRASSQDME 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G+AG A S I+P M + +LGG+ Sbjct: 176 AASLMGINVNNTISLTFAIGSALAGIAGVLVAISYPSITPYM-GAMPGLKAFVAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ + + F+ + F + + Sbjct: 235 GSIPGALVGGIAIGLLETFAKAYISTNFSDAIVFAILIIILLIKPSGLL 283 >gi|222478665|ref|YP_002564902.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] gi|222451567|gb|ACM55832.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] Length = 395 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 92/309 (29%), Gaps = 16/309 (5%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + + L+ +FA G +++ G GLLS + YA GAY I+ G Sbjct: 40 FGPSFQIYLFTDFLVVALFALGFNLLYGYTGLLSFGHGLFYAGGAYGVAIVLRDLGPVFA 99 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L+ + + + + L + + + + Sbjct: 100 DLVGSGISPLVTFVVGGVVGLALVVVVAVPVGWLSVRLEEIYFALITLAFGMLGYSLIIQ 159 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEI----FMYYVLLGMCFLSASIILWLRRTAISNA 209 D T ++ + I Y + + + + + + Sbjct: 160 DPAGLTNGTDGIIVLLGSVDIGGGSFRIGARRTYYALTVVVVLAATYGTWRVVNSPFGTV 219 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + IR++ +L + + F +S+A +G+AG A SP + +S + I Sbjct: 220 CKAIRESPDRASALGIDVRHHRWMTFIISAAIVGIAGVLRAGLASVASPGLTHWSTSAIA 279 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + ++GG T S + + + + + L Sbjct: 280 VIATVIGGATYFSGPIVGAFVFLYI------------RWGISRFPTLEAYWELFFGALLI 327 Query: 330 LVILMRSHS 338 V+L Sbjct: 328 GVVLYFKQG 336 >gi|310778218|ref|YP_003966551.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Ilyobacter polytropus DSM 2926] gi|309747541|gb|ADO82203.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Ilyobacter polytropus DSM 2926] Length = 291 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 94/303 (31%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ Y GAY + +R L + + Sbjct: 7 LLNGLALGSVYALIAIGYTMVYGIIKLINFAHGDIYMAGAYFGYVAVARLNLGFIPALIL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +S G+I+ + K + I LI + +L + G Sbjct: 67 AMTLSALLGIIIEKVAYKRLRNSPRITLLITAIGMSLLLENGFRLIFGPNPKP------- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L++ F + + L + + +T A R + + Sbjct: 120 ----FPELLKTKIFHLGSLRINNIQLIIFAVSIVLVIILEYIVFKTKTGKAMRASSYDIE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + RI P M + +LGG+ Sbjct: 176 AAKLMGINVDKIISLTFAIGSALAGAGGILVGIAYPRIEPYM-GIMPGLKAFVAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L ++ + + F L +V++++ Sbjct: 235 GVLPGAMLGGLVMGVAETFTKAFISTKLSDAIIFS-------------ILIVVLIVKPDG 281 Query: 339 LLR 341 LL Sbjct: 282 LLG 284 >gi|222106494|ref|YP_002547285.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] gi|221737673|gb|ACM38569.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] Length = 332 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 108/317 (34%), Gaps = 26/317 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L++ ++G QILI ++FA L ++VG G+++L + +GAY+ Sbjct: 29 GLIVLALALVPLLGDDYYALGSQILITIIFALSLDLLVGYAGIVTLGHAAFFGVGAYATG 88 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 I + + AM +G G ++G L+ L + TL +F I K Sbjct: 89 IASKYGWGEPLSGLLIGAMAAGLVGAVVGAIVLRTARFTLLMLTLCTVFLFGEIANKATW 148 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G V F + Y+ + L + L Sbjct: 149 LTGGVDG------------LVGMETWPVLGLYEFDLLGQVGYWFSALVFLLVWLGVRRLV 196 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + IRDN ++ + L F +S G+AGA A + Sbjct: 197 HSPFGQSIMAIRDNPGRAAAIGIAVRPRTLLIFVISCLLAGLAGALQAEVNQFVGLKDMS 256 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F + ++ ++ LGG L A+ + ++ + Sbjct: 257 FELSATILVMLALGGSGRLYGAIIGPAVYLIAQDILSK--------------DNPVMWQL 302 Query: 323 LMVIALFLVILMRSHSL 339 + I L +++L + Sbjct: 303 WLGIILVVLVLFAPGGI 319 >gi|114707824|ref|ZP_01440718.1| possible ABC transporter, permease protein precursor [Fulvimarina pelagi HTCC2506] gi|114536813|gb|EAU39943.1| possible ABC transporter, permease protein precursor [Fulvimarina pelagi HTCC2506] Length = 337 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 117/318 (36%), Gaps = 29/318 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 + + + M ++L + +FA ++++G GLLS + + AY Sbjct: 37 AIGIVVLLILPHYVYPVMIAKVLCFALFAAAFNLLLGFAGLLSFGHAAFFGMSAYVTGYC 96 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 G + L I G+ MGL +++ +G Y A+ TL ++++ + ++ T Sbjct: 97 LQSLGFTAELGILAGTAAGALLGLAMGLLAIRRQGIYFAMITLALAQMVYFVALQAP-FT 155 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G+ G+ R G S +YY++LG+ + I+ + Sbjct: 156 GGEDGLQGVPRRDLFGIIDMSSNMN-------------VYYLVLGVFCIGLFIVYRTVHS 202 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 ++IR+N+ SL KL AF +S+A G+AG+ S ++ Sbjct: 203 PFGQVLKSIRENEPRAISLGYDADRYKLMAFVLSAALSGLAGSTKVMVFQLASLTDIQWQ 262 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + V+ + +LGG+ ++ I+I + + T + Sbjct: 263 MSGEVVLMAVLGGIGTMVGPLVGATIIITLQNELAQI---------------GSVSTIVQ 307 Query: 325 VIALFLVILMRSHSLLRL 342 +L ++ Sbjct: 308 GAVFVFCVLAFRRGIVGE 325 >gi|115350839|ref|YP_772678.1| inner-membrane translocator [Burkholderia ambifaria AMMD] gi|115280827|gb|ABI86344.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia ambifaria AMMD] Length = 394 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++G +++ Y + A L +V G G+LSL + Sbjct: 51 IAIGVGVPLAALVAPESSAFHLSAYAMTLGGKLMCYAIAALALDLVWGYCGILSLGHGLF 110 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 111 FALGGYAIGMYLMREIGHEGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 170 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I + + + R F + Sbjct: 171 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRIAGFAIT 230 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + + +RD + L + + KL + Sbjct: 231 SPGTRTVLLLLTFATLVLAFIVARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 290 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+ G+AGA + I+P +I + V +GG +L + G Sbjct: 291 TLSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 350 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 351 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 383 >gi|329900647|ref|ZP_08272539.1| ABC-type branched-chain amino acid transport system, permease component [Oxalobacteraceae bacterium IMCC9480] gi|327549423|gb|EGF33987.1| ABC-type branched-chain amino acid transport system, permease component [Oxalobacteraceae bacterium IMCC9480] Length = 320 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 128/322 (39%), Gaps = 15/322 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++ L +++L + +FA ++++G GLLS + Y Sbjct: 5 IGYVIVLAALLAAPFWLYPVFLMKVLCFALFACAFNLLIGFTGLLSFGHAAFFGGAGYVA 64 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + GL + I + + G+ MG +++ +G Y + TL ++++ + ++ Sbjct: 65 GYAMATLGLPPEVGILLGTLAGALIGLFMGSFAIRRQGIYFTMITLALAQMLYFVFLQA- 123 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 T G+ G+ R + ++ +YYV++ + ++I+ + Sbjct: 124 KFTGGEDGLQGVPR-------------GKLLGFIDLSNDLTLYYVVMLIAVGGFAVIMRV 170 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + I++N+ SL + KL AF +S+ G+AGA + Sbjct: 171 VHSHFGQVLKAIKENEPRAISLGYDVDRYKLLAFVLSAGLSGLAGATKTLVLGFETLTDV 230 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRH 320 +S + +V+ + ++GG+ +LS I+I + + N + +++ + Sbjct: 231 HWSMSGLVVLMTLVGGLGTLSGPIVGAVIIIALENKLGSYGTWLANFTSIEWFRTIGQSV 290 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T ++ + + +L ++ Sbjct: 291 TIVIGLIFIICVLAFRRGIVGE 312 >gi|225386997|ref|ZP_03756761.1| hypothetical protein CLOSTASPAR_00747 [Clostridium asparagiforme DSM 15981] gi|225047009|gb|EEG57255.1| hypothetical protein CLOSTASPAR_00747 [Clostridium asparagiforme DSM 15981] Length = 295 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 110/311 (35%), Gaps = 37/311 (11%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 YI+ + I I ++ GL+I+ G +GL S+ +GAY+ IL YG+ ++ + Sbjct: 3 YIEGIMISACINIVCVAGLAILTGYIGLFSMGHACFLCLGAYTAGILTKFYGVPYFIALL 62 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++G +++G+P+L+ + Sbjct: 63 GGGAVAGLFSLVIGIPTLRGKMSADCFTIATFGFG----------------------EAT 100 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + + + + + L+ ++ +RD+ Sbjct: 101 RVVMANVNHPYVGGALGLSGLESLTTLPRAMILAVLAVFFARNYAKSQHGKIAIAVRDHA 160 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A + I KL +S+ F G+ G A I P++F + + +++ V+LGG Sbjct: 161 DASELIGVNIFHEKLKGLIISAFFCGVGGGMMAHYYTYIVPNIFGGTMSTNLLTAVVLGG 220 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S++ A AT +L E+ M + + L L + +R Sbjct: 221 VCSITGPALATTVLTATPEVLRFM---------------ANWRLPMYGLVLILTMRIRPE 265 Query: 338 SLLRLRTPSNF 348 L+ + S Sbjct: 266 GLMGYKELSLK 276 >gi|156742273|ref|YP_001432402.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941] gi|156233601|gb|ABU58384.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941] Length = 328 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 120/326 (36%), Gaps = 32/326 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + V L F + YI S + I +Y A +I+ G G LS + + Sbjct: 16 VAIGVGLALAFAAVPLAAPSAYILSFLLTIFMYGALAGSWNIIGGYAGYLSFGHAAFFGL 75 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L +G S +L +P++ ++ ++G P L+ RG Y ++ TLI+ ++ Sbjct: 76 GAYTTALLLFYFGWSPFLTLPLAGGVAALFAALVGYPCLRLRGPYFSLVTLILGLAMYSL 135 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + + + Y ++L + + + Sbjct: 136 TLNLPFTQG------------------STGLFLPFLKVDIYTSHVIFYEIMLALLVVVTA 177 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + RT + IR+++ A +L KL AF +S+ G+ G ++ + + Sbjct: 178 VLRQIARTKMGIGLAAIREDEDAAGTLGVDATRLKLQAFMLSAFLTGLVGGVYSYYKSYL 237 Query: 257 SPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P +F S +I ++ + + GG + +L V E+ Sbjct: 238 DPSFVFATSISITIVLMALFGGRLTWYGPLVGALVLSAVNEVLTTQAP------------ 285 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + L VI+ L+ Sbjct: 286 -PQTARIVFGALLIGVIMFLPDGLMS 310 >gi|320007437|gb|ADW02287.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331] Length = 654 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 106/311 (34%), Gaps = 29/311 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 VV + + L G + + + ++G+Q + + A+G++ V+ S G + L+ A+ Sbjct: 31 ALVVLLVAMSLLSGDFLTTQNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 89 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 A + G+ +WL + ++ ACG + G + ++ Sbjct: 90 ATVLAWSATSAGVPVWLAVIIAVATGLACGFVSGALVAYGKLPSFIATLAML-------- 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 VA L + + R + ++ +L M + Sbjct: 142 -------------SVARGLSLVISQGRPIPFPDSVSVLGDTLGGWLPVPVLVMIAMGLIA 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L RT I + I N++A + KL+ +A+S F +AG A+ Sbjct: 189 ALILARTYIGRSMYAIGGNEEAARLSGLRVKKQKLAIYALSGLFAAVAGIVLASRLVSAQ 248 Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 P + + I+ V++ GG+ S IL + ++ F + Sbjct: 249 PQAAQ-GYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQVV 307 Query: 312 FDCSFNMRHTT 322 + Sbjct: 308 IGVVIALAVLL 318 >gi|150377451|ref|YP_001314046.1| inner-membrane translocator [Sinorhizobium medicae WSM419] gi|150031998|gb|ABR64113.1| inner-membrane translocator [Sinorhizobium medicae WSM419] Length = 342 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 112/339 (33%), Gaps = 9/339 (2%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 + L ++ + + D + +LI ++ GL +G+ GLLS + Sbjct: 4 SYVTALILIGVIAAIAIGSQLLGIRLYDRISTNLLISLVLVVGLQTFMGNSGLLSFAHIG 63 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 +GAY+ +L + L + + + + A + + Sbjct: 64 FMGLGAYTSAVLTIPSQMKGMALPDLYGFMKVVEISPLLALFAAGALAAVVAAVISYPLM 123 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + A + + F + + V + Sbjct: 124 RLSDAASVI--------TSFALLVVLYTVMNNWSAFTNGPRTLFGLPKTTDMPVAAIVAS 175 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + + L + + R R+++ A +L I + AF +++ G+ GA + Sbjct: 176 IVVVVALVFKESRTGKLLRASREDEVAAAALGADIPQLRWRAFILAAFIAGIGGALWGHF 235 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 +P F E ++I+++++GG +++ T ++ E G + Sbjct: 236 ITSFAPKAFYLKETFLIITMLVIGGANTVTGAVAGTILITFAYEALRGTEGALNATSFGA 295 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + ++ +A+ V+++R L R + L R Sbjct: 296 GQVVGLTE-IVLALAMIAVMIVRPGGLFPNREIGHILTR 333 >gi|322830804|ref|YP_004210831.1| urea ABC transporter permease [Rahnella sp. Y9602] gi|321166005|gb|ADW71704.1| urea ABC transporter, permease protein UrtC [Rahnella sp. Y9602] Length = 357 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 102/342 (29%), Gaps = 27/342 (7%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 +L L V+ L L Y ++ +IL Y + A L +V G GLLSL + Sbjct: 24 VLIFLIVMPFLALLPASNPLAISTYTLTLIGKILCYAIVAIALDLVWGYAGLLSLGHGLF 83 Query: 74 YAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +A+G Y+ + W +P + + L L Sbjct: 84 FALGGYAMGMYLMRQAAGSGLPDFMSFLSWTELPWFWAGTQHFAWALCLIVLVPGALAFV 143 Query: 124 IATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 + ++ G + + + FP + Sbjct: 144 FGYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTR 203 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + ++ + + S ++ L R+ +RD + KL + +S+ Sbjct: 204 VGLFLATVLVLVASLALGFALARSKYGRVLTAVRDAENRLIFCGYDPKGFKLFVWTISAM 263 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA + I+P + +I V LGG +L I+ G Sbjct: 264 LCGLAGALYVPQVGIINPGEMSPTNSIEAAIWVALGGRGTLIGPVIGAGIVNGAKSW--- 320 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + ++ LV L ++ L Sbjct: 321 -----------FTVAIPEYWQFVLGGMFILVTLFLPQGVIGL 351 >gi|194291187|ref|YP_002007094.1| branched-chain amino acid ABC transporter permease [Cupriavidus taiwanensis LMG 19424] gi|193225022|emb|CAQ71033.1| putative Branched-chain amino acid transport system permease, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 339 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 126/298 (42%), Gaps = 15/298 (5%) Query: 46 ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105 +L + +FA ++++G GLLS + Y+ +G++ + + + Sbjct: 43 VLCFALFACAFNLLIGYTGLLSFGHAAFFGGAGYAAGHAMKVWGVTPEIGLILGTGTGAL 102 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 G ++G +++ +G Y ++ TL ++++ I ++ T G+ G+ R Sbjct: 103 IGYVVGSLAIRRQGIYFSMITLALAQMLFFICLQAP-FTGGEDGLQGIPR---------- 151 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 F + ++ +YYV L + + ++I+ + + I++N+ SL Sbjct: 152 ---GKLFGVLSLSDDLTLYYVALVIIVAAFALIVRTVHSPFGQILKAIKENEPRAVSLGY 208 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + KL+AF +S+A G+AG+ A + +S + VI + ++GG+ +LS Sbjct: 209 DVDRFKLTAFVLSAALSGLAGSIKALVLGFETLTDVHWSMSGSVILMTLVGGLGTLSGPI 268 Query: 286 KATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +++ + + + + + + + + T + + + +L ++ Sbjct: 269 VGAFVIVALENKLGDIGNFLASVTGISWFGTLGESVTMVTGVIFVICVLTFRRGIMGE 326 >gi|227823571|ref|YP_002827544.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] gi|227342573|gb|ACP26791.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 329 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 127/335 (37%), Gaps = 29/335 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++A L L + ++IL + +FA ++++G GLLS + Sbjct: 16 VVAQTVFLGAGLAFLLVAPLFFYPVFLMKILCFALFACAFNLLLGYTGLLSFGHAAFFGG 75 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY +GL + + + G ++G +++ +G Y A+ TL ++++F Sbjct: 76 AAYFTAHAVKEWGLPVEFGLLAGVAGAALLGAVIGFFAIRRQGIYFAMITLALAQMFYFF 135 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ + ++S+ R F + MYY +L + + + Sbjct: 136 CLQAEFTHG--------------EDGIQSVPRGHLFGFIDLSQSSNMYYFVLAVFVIGIA 181 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 II + + ++IR+N+ SL ++ KL AF +S+A G+AG A Sbjct: 182 IIWRIINSPFGMILKSIRENETRAISLGYSVRNYKLGAFVMSAALTGLAGGLKALVFQFA 241 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + VI + +LGG+ +L A+++ + F Sbjct: 242 TLTDVGWQMSGEVILMTLLGGIGTLIGPLFGAALVVTLQNYLATSEFPV----------- 290 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + + +L+ ++ S R Sbjct: 291 ----TIITGVVFMVCVLLFRRGIVGEFYNSRLGRR 321 >gi|320352225|ref|YP_004193564.1| HAAT family amino acid/amide ABC transporter membrane protein 2 [Desulfobulbus propionicus DSM 2032] gi|320120727|gb|ADW16273.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Desulfobulbus propionicus DSM 2032] Length = 360 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 123/365 (33%), Gaps = 51/365 (13%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K K L + + + +Y + Y + GL +++G G +S+ Sbjct: 2 KTRKNWSLAGLCLLVAILHLCTVLTGTEYYLTQLTMAAYYGLVIIGLGVLMGYAGQISIG 61 Query: 70 CVIAYAIGAYSYV-------------------------------ILGSRYGLSIWLLIPV 98 +AIG Y ++ W Sbjct: 62 HAGFFAIGGYLAAALTTRDLGPLQEAWAVRWLDSVGLLARGQDLYGAQLLTVTPWAACCC 121 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ +++G+P LK +G YLA+ATL I IL+ GI Sbjct: 122 AVLVAALIALVIGIPVLKLKGHYLAMATLGFGTIIYRILLAAPYF-GEADGISEVPGFTL 180 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + S + I +Y+ G+ + ++L L + + A R++ +++ Sbjct: 181 VPAMAN---WDGLVISGDPAHRILNFYLAWGVLIVGMGLLLNLIGSRVGRALRSLHSSEE 237 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + +KL F +S+ + +AG I P +++ +++V +GGM Sbjct: 238 AAEASGIDTARSKLQVFVLSAVYAAVAGVLLTHFNGGIGPSEASVMKSVRYVALVAVGGM 297 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 T+L L + F + + L +V+L+ Sbjct: 298 TNLWGTLLMGVGLTFL----------------SLRGVFGAYDDAVFGLILIMVMLLAPEG 341 Query: 339 LLRLR 343 +L LR Sbjct: 342 ILSLR 346 >gi|258592152|emb|CBE68457.1| high-affinity branched-chain amino acid ABC transporter (permease protein) [NC10 bacterium 'Dutch sediment'] Length = 300 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 94/303 (31%), Gaps = 15/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ Y +GAY I+ ++ L P Sbjct: 6 LVNGLTLGSVYALIALGYTMVYGIIELINFAHGEVYMLGAYI-GIVTFSLLTTLHLTSPD 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 SA+ + L +A + + + + +V Sbjct: 65 SAVTLVCMMIAAILFCGACGITIERLAYRPLRTAPRLSPLISALGVSIFLQNFVMLAQGP 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L +++ + + L +RRT I A R +++ Sbjct: 125 RDKGFPELFIQGGIDLPGGRISAIQLFIMATSVLMMVGLHLLVRRTRIGKAMRATAQDKQ 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + SA +AG I+ + + + + +LGG+ Sbjct: 185 MASLVGIDVNRVISVTFLIGSALAAVAGVMVGMYYGLINFYIGYIA-GVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + L G + + F L LV++ R Sbjct: 244 GSIPGAMLGGVLLGLIESLGAGYISSEYKDVFAF-------------AILILVLIFRPRG 290 Query: 339 LLR 341 LL Sbjct: 291 LLG 293 >gi|317401949|gb|EFV82552.1| branched-chain amino acid transport permease [Achromobacter xylosoxidans C54] Length = 327 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 135/345 (39%), Gaps = 23/345 (6%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +N+ +LAVV +L F+ + ++I+ Y +FA ++++G GLLS Sbjct: 1 MNRQFLGYAVLAVVVAILPFVGVYPIF--------AMKIMCYALFACAFNLLLGFTGLLS 52 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AY+ +G+ + + ++ G+ MG +++ G Y A+ TL Sbjct: 53 FGHAAFLGSAAYAAGHALKVWGVPTEIGLLFGVAVAALLGLAMGALAIRRSGIYFAMITL 112 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++++ ++ T G+ G+ R + ++ +YY++ Sbjct: 113 ALAQMVFFFFLQA-KFTGGEDGLQSVPRGT-------------LLGIIDLSKDLNLYYLV 158 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 +G+ + II + + +R+N+ SL + KL AF +S+A G+AGA Sbjct: 159 MGVFIIGYFIIWRTVHSPFGQVLQALRENEPRAISLGYDVDRFKLLAFVLSAAIAGLAGA 218 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + + +VI + ++GG+ +L+ I++ + + Sbjct: 219 TKTLVFVSATLSDATWQMSGLVILMTLIGGLGTLTGPILGAFIVVLLENKVGDFGQMMAS 278 Query: 308 -SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + T ++ + + +L ++ R Sbjct: 279 LTGVDWFLRLGESVTIVIGLIFVICVLAFRRGIVGEIGALIEKRR 323 >gi|146339162|ref|YP_001204210.1| putative high-affinity branched-chain amino acid transport system permease livM [Bradyrhizobium sp. ORS278] gi|146191968|emb|CAL75973.1| putative high-affinity branched-chain amino acid transport system permease protein livM [Bradyrhizobium sp. ORS278] Length = 628 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 124/330 (37%), Gaps = 33/330 (10%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L F + + Y ++G +I I+V+FA L ++ GL S + +GAY Sbjct: 315 LVALAFAAMLPFIAGNYALTVGSEIAIFVIFAASLHFLMAVGGLASFGHAAYFGLGAYGV 374 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 L GL + + + ++ A + G +++ G Y A+ TL ++I +I +W Sbjct: 375 AFLAKMAGLPMIACLLLGPLLGAAGAAVFGAFAVQLSGVYFAMLTLAFAQIVWSIAFQWV 434 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G +P + Y++ LG+ S++ + Sbjct: 435 AVTGGDNG------------------ILGLWPEKWAASPSHFYWLALGVSAFVVSVLRLI 476 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + A R +RD+ S+ + +AF ++ G+ GA FA + + PD Sbjct: 477 TFSPFGYALRGMRDSPLRSESIGINGKRIQWTAFIIAGTTAGIGGALFAYLKGSVFPDNM 536 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 S ++ + +V+LGG+ ++ + + Sbjct: 537 GISLSVDALVMVLLGGVETVPGAIFGAIVYKALNIWLVSQ---------------TDWSK 581 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ I + L++++ ++ + R Sbjct: 582 LVLGIFIVLIVVVFPKGIVGVVESVMHRRR 611 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 96/311 (30%), Gaps = 28/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--SRYGLSIWLLI 96 + + A GLSI+ G +++ Y +GAY L L W I Sbjct: 8 FLTGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAFSLTERLSGPLGFWGGI 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V+A+ G+++ + L+ + L+ + ++ + G Sbjct: 68 VVAALAVAVIGVLVEIVLLRRIYHAPELFQLLGTFGLTLMVEDLVVLIWGPD-------- 119 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 R+ + ++++ + ++ L +RT R + Sbjct: 120 --DLVGRRAPGFKGAVDFFGQNIPSYDLFLIVLGPVVLGALWLLFQRTRWGILVRAATQD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L + S FAV + GA + V +V++G Sbjct: 178 RDMVAALGVNQKWLFTSVFAVGVFLAALGGALQIPRDAV--HHAMDLRIIVEVFVVVVIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ A ++ + + F L+ + + +V+++R Sbjct: 236 GLGSILGAFVAAVLVSELNAFGILI--------------FPTISLILVFLVMAVVLVVRP 281 Query: 337 HSLLRLRTPSN 347 L + Sbjct: 282 WGLFGRKEAPA 292 >gi|228900552|ref|ZP_04064775.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis IBL 4222] gi|228859103|gb|EEN03540.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis IBL 4222] Length = 298 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 123/313 (39%), Gaps = 31/313 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98 M QI I+ +FA +++G G++S + + IGAY +L R + + I Sbjct: 1 MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++S I+GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 YYV L ++ +++I + I N++ Sbjct: 121 RDRF-------------------TFYYVSLVCLCFIFILLRLFTKSSIGKVLKAISQNEQ 161 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L ++ K+ A V+ ++G F + ++ +F + + + ++GG+ Sbjct: 162 RVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L + I+ + + Y R T ++ + +V+L+ Sbjct: 222 GTLIGAIAGSGIIESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKG 272 Query: 339 LLRLRTPSNFLER 351 L+ +R Sbjct: 273 LVGTVKKLKGFKR 285 >gi|113868983|ref|YP_727472.1| ABC transporter permease [Ralstonia eutropha H16] gi|113527759|emb|CAJ94104.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 311 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 96/305 (31%), Gaps = 6/305 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G LG+++ IGA + + L Sbjct: 8 IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGALTALSAILGLQKFAPGLPEW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + L + + +A L + ++ + + Sbjct: 68 LTLVIATLVAMPVCAILSYSIERIAYRPLRNAPRLAPLITAIGVSIILQTMGMLIWSRNP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L ++ ++ + + ++ + RT + A R +NQK Sbjct: 128 LTFPQLLPSEPIDIGTTGATITGKEMVIIGMAVMVMSGLLALVNRTKLGRAMRATAENQK 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + F + + +AG A + M F + + +LGG+ Sbjct: 188 VAGLMGVNPNFVISATFMIGATLAALAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + L G N + + I L V++ R Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTNGVFG-----SNYQDVFAFIVLITVLVFRPSG 301 Query: 339 LLRLR 343 ++ R Sbjct: 302 IMGER 306 >gi|115350134|ref|YP_771973.1| inner-membrane translocator [Burkholderia ambifaria AMMD] gi|115280122|gb|ABI85639.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia ambifaria AMMD] Length = 324 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 123/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + V Sbjct: 26 FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLATAGYGTGYTIQTLGFTPELGVLVGTF 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 86 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTRGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + + + I+ + + I++N+ Sbjct: 132 GLQGVPRGHLFGLVDLSNDVALYYVVLAVIVAACAFIVRIVHSPFGQVLVAIKENEARAI 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVLVLGFETLSDAHWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + + S T + + +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASVTGIGWFHSLGESTTIVTGLIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|91789640|ref|YP_550592.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91698865|gb|ABE45694.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Polaromonas sp. JS666] Length = 309 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 100/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + + ++ Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMQEAMPGTPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + +L F + +A L S ++ + + + + Sbjct: 68 LILLISLLIAFVVCGALNFAIEKVAYRPLRNSPKLAPLITAIGMSLLLQTLAMMIWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ F + + ++L + ++ + T + A R +N + Sbjct: 128 --KPYPTLLPTEPFQVGGAVITVTQLFILGATAVSLSVLMWLVHYTRLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ + M F + + + GG+ Sbjct: 186 VAALMGVRPDTVISATFIIGAILAALAGVMYASNYGTVQHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + + G +L + I L V+ +R Sbjct: 245 GNLGGAVLGGILLGLIESIGAGYIGPLTGGVLG-----SQYSDIFAFIVLIFVLTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|194290589|ref|YP_002006496.1| high-affinity branched-chain amino acid transport protein,ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] gi|193224424|emb|CAQ70435.1| high-affinity branched-chain amino acid transport protein,ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 311 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 96/305 (31%), Gaps = 6/305 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G LG+++ IGA + + L Sbjct: 8 IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGALTALSAILGLQKFAPGLPEW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + L + + +A L + ++ + + Sbjct: 68 LTLVIATLVAMPVCAILSYSIERVAYRPLRNAPRLAPLITAIGVSIILQTAGMLIWSRNP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L ++ ++ + + ++ + RT + A R +NQK Sbjct: 128 LTFPQLLPSDPIDIGATGATITGKEMVIIGMAVMVMSGLLALVNRTKLGRAMRATAENQK 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + F + + +AG A + M F + + +LGG+ Sbjct: 188 VAGLMGVNPNFVISATFMIGATLAALAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + L G N + + I L V++ R Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTNGVFG-----SNYQDVFAFIVLITVLVFRPSG 301 Query: 339 LLRLR 343 ++ R Sbjct: 302 IMGER 306 >gi|33601733|ref|NP_889293.1| permease component of ABC transporter protein [Bordetella bronchiseptica RB50] gi|33576170|emb|CAE33249.1| permease component of ABC transporter protein [Bordetella bronchiseptica RB50] Length = 329 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 125/320 (39%), Gaps = 26/320 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L F S+ I +LI+ ++A G +++ G +GLLS GAY+ Sbjct: 27 VLAAIAFFCVFPWIMPYQSVAINVLIFGLYAVGFNLLFGYMGLLSFGHAAFLGTGAYTAG 86 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 IL S++G + W +P + +S + MGL +++ RG Y A+ TL +S+ ++ + Sbjct: 87 ILISQHGAAWWWAVPAAIAMSALVALAMGLLAIRTRGIYFAMVTLALSQCVYFLVYQLPA 146 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 V ++ + YY +LG L+ +++ + Sbjct: 147 SGG-----------ENGLRGVNVAEVSLLGLRLDLLDPMQKYYFILGFVALAMAVLSRIL 195 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + IR+N+ + + +KL F +S+AF G+AGA A ++ + Sbjct: 196 SSPFGGVVEAIRENESRARACGFDVDRSKLLTFVLSAAFCGLAGALNAIHLSSVAIETLA 255 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 ++ + +V+ + +LGGM + A+ + + ++ + Sbjct: 256 YTTSGMVVMLCLLGGMGTYFGPFVGAALFLFIQDVASEYTENW---------------QL 300 Query: 323 LMVIALFLVILMRSHSLLRL 342 + + +L + Sbjct: 301 YVGAVFVIFVLFFPKGVWGT 320 >gi|170745119|ref|YP_001766576.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] gi|170658720|gb|ACB27774.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] Length = 344 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 120/323 (37%), Gaps = 35/323 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--------- 82 + Y+ + + I + A L++++G G LSL + + IGAY Sbjct: 19 GLGASPYLLNALVVTGILTIGAMSLNLLLGFTGQLSLGHIAFFGIGAYVSALTSLGFDVD 78 Query: 83 ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 I + + ++ +GACG ++G S + RG Y I T+ +E+ + + + Sbjct: 79 LGFGIRVVHEPWPAVVGLLLATAAAGACGYLIGRLSFRVRGAYFVIVTISFAEVVRLVAL 138 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W +T G + + + + ++ YY++L + L ++I Sbjct: 139 NWVELTQGPLALTNIPAIT---------LGLPGLGMWTLKTKLQNYYLVLAVGTLCYAVI 189 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L A R +++N+ S+ A +S+A G AG+ +A I P Sbjct: 190 ARLVGGRFGRAMRGLKENEPLALSVGINATRTLTVAAVISAAMAGAAGSLYAHYLRIIDP 249 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 D+F F+ + ++ +V+ GG +L I + Sbjct: 250 DVFLFATTVSMVIMVVAGGKGTLMGPVVGGLIFGLLPVALR-------------PVMAPE 296 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + + L +++ + ++ Sbjct: 297 AQWIVYGLVLIVILFVMPRGIVP 319 >gi|288916402|ref|ZP_06410780.1| ABC transporter related protein [Frankia sp. EUN1f] gi|288352173|gb|EFC86372.1| ABC transporter related protein [Frankia sp. EUN1f] Length = 1033 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 120/316 (37%), Gaps = 19/316 (6%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 LG + S I I + L +V G G +SL + A++ L Sbjct: 334 ALGVLGLLVTTGTWRSAVIGTFIAAIIGLSLVVVTGYAGQVSLAQLALAGSAAFTLSGLT 393 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + + ++A+++ G+++GLP+L+ +G L I TL ++ + + + I + Sbjct: 394 QSWHVPFPFAPLLAALVATVLGVVIGLPALRLKGLTLGIVTLALAYTIEAVWFRNTDIVD 453 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 +L+ L ++ + F R P + L + A + LR +A Sbjct: 454 SDGAQVTQPKLFGLDLSIGTGHAFPRLPFG---------LLCLAVLVAVAFGVAKLRTSA 504 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + +A +R N+++ + ++ K+++FA++S G+ G+ A + ++ F Sbjct: 505 LGSAMLAVRANEQSAAGIGINVVAVKVASFAIASFIAGLGGSLLAYRLNTVTFASFTALG 564 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + ++S L G+TS+ A + + + + Sbjct: 565 GLALLSTAYLAGVTSVYGGILAGVMASTGITFI----------AMDRWVHLGDWFPVITG 614 Query: 326 IALFLVILMRSHSLLR 341 + L + ++ Sbjct: 615 VLLLVALIGHPEGFAS 630 Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 85/287 (29%), Gaps = 7/287 (2%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107 +Y L + S G+++ AYSY L L + +P S I G+ Sbjct: 16 VYAALGLALVLTYRSSGVINFATGAVALYVAYSYAYLRDGQFLVLLPGLPESVDIGGSWP 75 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYVADRLYFLGTT 162 + G L + +A RL + Sbjct: 76 LAPAAALSLLLGALLGAILYLAVFRPLREAPPLARAVASLGVLVVIQSTMAIRLGTSPVS 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 V ++ R+ +Y+++ + L+ + R T R + ++Q + Sbjct: 136 VSAIFPSERWEFGDAKLLSDRFYLVVAVVALTLVLTAVYRFTRFGLLTRAVAESQTGAYV 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + L + +S G AG A + ++ ++GG +L Sbjct: 196 SGVSPDRIALFNWMISGVTAGAAGILIAPLSPL--SPTTYTLFVVPALAAAVVGGFKNLI 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 A ++ + + + L K S + ++V L Sbjct: 254 PTVAAGIVIGMLQAEAQSLVSRDVSWLPKTGSSELIPLIVILVALLI 300 >gi|219682619|ref|YP_002469002.1| branched-chain amino acid ABC-type transport system permease components [Bifidobacterium animalis subsp. lactis AD011] gi|219620269|gb|ACL28426.1| branched-chain amino acid ABC-type transport system permease components [Bifidobacterium animalis subsp. lactis AD011] Length = 475 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 80/302 (26%), Gaps = 24/302 (7%) Query: 44 IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103 I L+ + A G+++V G+ GL S + +G + + + L + I Sbjct: 196 IFGLMLGLMAVGMNLVYGTTGLSSFSHGEQVTLGGLMAYVGTQMLHMPVVLSAIFAVAIG 255 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 G + M I A Y+ + Sbjct: 256 ALAGWVQNQLVWAPLRHKRVGVMQQM----------IVTIGLSMALQYIYQFFFGGDIKG 305 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 ++ S+ ++L T + A R + DN + Sbjct: 306 IVKSVPEGIQLGPIVTNAPTLIAAAIALVTIVSVTVFLYCTRLGRATRAVSDNAALAAAS 365 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + + +S ++G + I+ + + +++ + V LGG+ + + Sbjct: 366 GINVDSVVRIVWILSCGLAALSGVLIGIHLNGIAWNT-GVTLLMLMFAAVTLGGLGTANG 424 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 I+ V ++ + + R + + Sbjct: 425 ALVGALIVGIVADMSTLVIPSDMRYASALAILILVLLI-------------RPQGIFGKQ 471 Query: 344 TP 345 Sbjct: 472 KR 473 >gi|88855356|ref|ZP_01130020.1| branched-chain amino acid ABC transporter permease protein [marine actinobacterium PHSC20C1] gi|88815263|gb|EAR25121.1| branched-chain amino acid ABC transporter permease protein [marine actinobacterium PHSC20C1] Length = 359 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 118/339 (34%), Gaps = 14/339 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + + + + L + L++ A ++ G+ G+LS + Sbjct: 21 VFAAILPLLNISIPGVLPGATYTPGTLQLLALALLFASLALSYHLLFGTAGMLSFGHALY 80 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +A+GAY I+ + LS+ + ++ I A ++G SL+ G A+ TL ++ Sbjct: 81 FALGAYGLGIVLQQTELSLIPALGLTLAIVIAAAYLLGSLSLRVTGISFAMVTLAFAQAG 140 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 ++ + IT G+ G +R V+ +Y++ L + + Sbjct: 141 NVLVRRNPAITGGEEG-------------LRLDTEHVPDFFIGVVNTRNLYWLALALLVI 187 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 ++ + +A R+N+ L KL AF ++S + G + Sbjct: 188 VFVVVASFEHSRAGHAVTATRENELRVRVLGLRPFGVKLMAFVIASVLASLVGMVHLLLQ 247 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +P + ++ IV+LGG+ S I + + + + L Sbjct: 248 SGTTPRATSADFTLTILVIVVLGGVGSRWGAIVGGIIYTLLDQRLTALAGSEAIADLPAV 307 Query: 314 CSFNMRH-TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + ++ LV+L + + R Sbjct: 308 LRIPLSEPLFILGTLFILVVLFLPGGIAGAARRLSTGTR 346 >gi|220914813|ref|YP_002490121.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219952564|gb|ACL62954.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 293 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 121/304 (39%), Gaps = 26/304 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ ++ I I + + A ++++G GL+S+ + YAIGAY +L G+ + L + Sbjct: 2 DYLFTLAILIGLSIALASSFNLIIGYAGLISIAHPVFYAIGAYVSALLARDLGVPVPLAM 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 A+ + A + LPSL+ GDYL IA++ + +T G G+ Sbjct: 62 LCGALAAAAASAAVALPSLRVSGDYLLIASIGFQLGVLEAIKNIA-VTGGAGGLTNIPPF 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++LG L+ + + A +RD+ Sbjct: 121 LVHEAGRG-----------------AYVALVLGFAALTVWLNWTIAHGPYGRALSAMRDD 163 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + AF L + K++ FA SA G+AGA +A ++P+ F+ ++ ++++V++G Sbjct: 164 ELAFAGLGRNAVSMKVAVFAFGSAVAGLAGALYAHYFRFVTPEQFEILQSAALLTMVVVG 223 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ + +L + + ++ + + + + R Sbjct: 224 GIRTTWGPVLGAVLLQALPQAITFLDLP--------PALLGPLQGLMFTGLVLVFMFWRP 275 Query: 337 HSLL 340 L+ Sbjct: 276 QGLI 279 >gi|45440785|ref|NP_992324.1| branched-chain amino acid ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|51595574|ref|YP_069765.1| ABC type branched-chain amino acid transporter, permease protein [Yersinia pseudotuberculosis IP 32953] gi|108806898|ref|YP_650814.1| branched chain amino acid ABC transporter permease [Yersinia pestis Antiqua] gi|108812947|ref|YP_648714.1| branched chain amino acid ABC transporter permease [Yersinia pestis Nepal516] gi|145599775|ref|YP_001163851.1| branched chain amino acid ABC transporter permease [Yersinia pestis Pestoides F] gi|149366816|ref|ZP_01888850.1| putative branched-chain amino acid transport system, permease component [Yersinia pestis CA88-4125] gi|162418934|ref|YP_001605867.1| hydrophobic amino acid ABC transporter permease [Yersinia pestis Angola] gi|165924661|ref|ZP_02220493.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165938308|ref|ZP_02226866.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009786|ref|ZP_02230684.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211555|ref|ZP_02237590.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400461|ref|ZP_02305974.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419831|ref|ZP_02311584.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424213|ref|ZP_02315966.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466734|ref|ZP_02331438.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis FV-1] gi|170025095|ref|YP_001721600.1| urea ABC transporter permease UrtC [Yersinia pseudotuberculosis YPIII] gi|186894638|ref|YP_001871750.1| urea ABC transporter permease UrtC [Yersinia pseudotuberculosis PB1/+] gi|218928352|ref|YP_002346227.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis CO92] gi|229841133|ref|ZP_04461292.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843237|ref|ZP_04463383.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis biovar Orientalis str. India 195] gi|229894145|ref|ZP_04509331.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Pestoides A] gi|229903379|ref|ZP_04518492.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Nepal516] gi|270487190|ref|ZP_06204264.1| urea ABC transporter, permease protein UrtC [Yersinia pestis KIM D27] gi|294503206|ref|YP_003567268.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Z176003] gi|45435643|gb|AAS61201.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis biovar Microtus str. 91001] gi|51588856|emb|CAH20470.1| ABC type branched-chain amino acid transporter, permease protein [Yersinia pseudotuberculosis IP 32953] gi|108776595|gb|ABG19114.1| Branched-chain amino acid transport system, permease component [Yersinia pestis Nepal516] gi|108778811|gb|ABG12869.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Antiqua] gi|115346963|emb|CAL19853.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis CO92] gi|145211471|gb|ABP40878.1| Branched-chain amino acid transport system, permease component [Yersinia pestis Pestoides F] gi|149291190|gb|EDM41265.1| putative branched-chain amino acid transport system, permease component [Yersinia pestis CA88-4125] gi|162351749|gb|ABX85697.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis Angola] gi|165913686|gb|EDR32305.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165923721|gb|EDR40853.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165991182|gb|EDR43483.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207326|gb|EDR51806.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166962572|gb|EDR58593.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050410|gb|EDR61818.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057062|gb|EDR66825.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751629|gb|ACA69147.1| urea ABC transporter, permease protein UrtC [Yersinia pseudotuberculosis YPIII] gi|186697664|gb|ACC88293.1| urea ABC transporter, permease protein UrtC [Yersinia pseudotuberculosis PB1/+] gi|229679149|gb|EEO75252.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Nepal516] gi|229689584|gb|EEO81645.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis biovar Orientalis str. India 195] gi|229697499|gb|EEO87546.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704030|gb|EEO91043.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Pestoides A] gi|262361245|gb|ACY57966.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis D106004] gi|262365218|gb|ACY61775.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis D182038] gi|270335694|gb|EFA46471.1| urea ABC transporter, permease protein UrtC [Yersinia pestis KIM D27] gi|294353665|gb|ADE64006.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Z176003] Length = 358 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 101/344 (29%), Gaps = 27/344 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L V+ L L Y ++ +IL Y + A L +V G GLLSL + + Sbjct: 25 LIALIVLPFLALLPADHPLAISTYTLTLIGKILCYAVVAIALDLVWGYAGLLSLGHGLFF 84 Query: 75 AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 A+G Y+ + W +P S + L L Sbjct: 85 ALGGYAMGMYLMRQAAGDGLPAFMSFLSWSELPWFWSGSQYFVWALCLIVLVPGLLAFLF 144 Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + ++ G + + + FP S I Sbjct: 145 GYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGFPVSATSTRI 204 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 ++ L + S ++ L L RT +RD + KL + +S+ Sbjct: 205 ALFLATLALLIASLALGLALARTKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVL 264 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 +AGA + I+P + +I V LGG +L I+ G Sbjct: 265 CALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVNGAKSW---- 320 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + + LV L ++ L Sbjct: 321 ----------FTMAMPEYWQFFLGLIFILVTLFLPKGVIGLLRR 354 >gi|154248072|ref|YP_001419030.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154162157|gb|ABS69373.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 375 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 106/360 (29%), Gaps = 39/360 (10%) Query: 8 LNKYDKILCLLAVVYPLLL------FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +++ I L+ + +L+ Y+ + + L Y + A + +V G Sbjct: 7 IDRTGGIFLLVMLAVAVLVPASNLLLPAGHPLHVPDYMIPLLGKYLTYALLAVAVDLVWG 66 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G+LSL +A+G Y+ + R + LP D Sbjct: 67 YCGVLSLGHGAFFALGGYAMGMYLMRQIGPRGVYGNPVLPDFMVFLNYKELPWFWHGFDM 126 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162 A L++ + + + + D + Sbjct: 127 FPFAMLMVVLVPGALAFVFGWFAFRSRVTGVYLSIITQAMTFALMLAFFRNDMGFGGNNG 186 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + FP S + ++ I L + +RD + Sbjct: 187 LTDFKDILGFPISAPSTRLTLFVASAVALAAGYLICRALVTSKYGKVLVAVRDAESRTRF 246 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L + KL A+ +S+ G+AGA + I+P F +++I ++ V +GG +L Sbjct: 247 LGYRVQNYKLLAWVLSAMLAGVAGALYVPQVGIINPSEFAPAQSIEMVIWVAVGGRGTLV 306 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A I+ G+ + LV L +L L Sbjct: 307 GAALGAVIVNAGKTWFTGV--------------LPEAWLFALGALFVLVTLFLPRGVLGL 352 >gi|228476571|ref|ZP_04061253.1| branched-chain amino acid ABC transporter permease protein [Streptococcus salivarius SK126] gi|228251766|gb|EEK10831.1| branched-chain amino acid ABC transporter permease protein [Streptococcus salivarius SK126] Length = 294 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y +GA+ + G++ W+ + Sbjct: 10 LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMMGAFVGYYAINSLGMNFWVALVF 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+++ + + + I+ LI + L + G Sbjct: 70 AMLVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVLFVGADTRS------- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + + +L+ L ++ L +++T + A R + + Sbjct: 123 ----FPQKIAIKTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S+ G AG + I P M + I +LGG+ Sbjct: 179 AAELMGINVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L + + ++ L +++L+R Sbjct: 238 GIIPGAALGGFVIGILETLSTAIG-------------LSSYRDAIVYGVLIVILLVRPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|330875491|gb|EGH09640.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 355 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 139/346 (40%), Gaps = 22/346 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +F LR ++ + + F+ + + + ++ I L+ + GL+++ G Sbjct: 18 RLFRLRQDR------IALWGLLVFAFVGVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G LSL A+GA++ + G+ + L + ++S A ++ GLPSL+ +G Sbjct: 72 YAGQLSLGSAAFMAVGAFAAYNLQLRVPGMPLLLGFALGGLVSAAVALLFGLPSLRIKGF 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YL ++TL + + +L ++ TN A + Sbjct: 132 YLLVSTLAAQFVVEWVLTRFSWFTNDNASGVITSPPLI-------------IAGVSFSSP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Y + L + L + L R + W +RD A + + AKL AFA+S Sbjct: 179 QGRYLLTLALVVLLFWLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGF 238 Query: 241 FIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 ++G+AG+ +A A + P F + + ++ I+I+GG+ S+ A ++ L Sbjct: 239 YLGIAGSLWAFAYLGTVEPHGFDLNRSFQILFIIIIGGLGSVQGNFFGAAFIVLFPILLG 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++ L+ N++ L + ++ L RL Sbjct: 299 NLSALLPVGLIDSGQLENIQKM-LFGALIIAFLIKEPEGLTRLWQR 343 >gi|148979617|ref|ZP_01815622.1| branched-chain amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] gi|145961702|gb|EDK26999.1| branched-chain amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] Length = 390 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 99/349 (28%), Gaps = 33/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + ++ + + + + S+ + L Y M A L +V G LG+LSL Sbjct: 23 AILAAVILIPLANTMLPSGHPLHVETFTISLMGKYLSYAMLALALDLVWGYLGILSLGHG 82 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+G Y+ + R + LP D A L++ Sbjct: 83 AFFALGGYAMGMYLMRQIGDRGVYGDPILPDFMVFLDWSALPWFWQGFDQFWFACLMVVL 142 Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172 + + + + + + + + Sbjct: 143 VPGALAYLFGYLAFRSRVSGVYLSIMTQALTYALMLAFFRNEMGFGGNNGLTDFKDIIGL 202 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 +I ++ LS + + + + IRD + + + KL Sbjct: 203 SLQSDAVKIGLFVATGISLILSYIVCRMVVTSRLGRVALAIRDTESRTRFMGYDVDGIKL 262 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 F +S+ G+AGA + I+P F +I ++ V LGG +L I+ Sbjct: 263 WVFVLSAVIAGIAGALYVPQVGIINPGEFAPLNSIEIVVWVALGGRATLFGAIVGALIIN 322 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F F + L + ++ Sbjct: 323 YAKSW--------------FTVEFPEVWLFALGGLFVLSTMYFPQGVIG 357 >gi|113867097|ref|YP_725586.1| ABC transporter permease [Ralstonia eutropha H16] gi|113525873|emb|CAJ92218.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 401 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 96/344 (27%), Gaps = 32/344 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ Y ++ +I+ + + A L +V G G+LSL + +A+G Y+ + Sbjct: 48 LVLPEGHPLHLSAYALTLVGKIMCFALAAIALDLVWGYCGILSLGHGLFFALGGYAMGMY 107 Query: 85 GSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 R + + + G +L + + Sbjct: 108 LMRSIGREGVYKSELPDFMVFLDWKELPWFWHGTEHLGYALLLVVLVPGVLAWLFGFFAF 167 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSSFVIYEIFMYYV 186 IK ++ + A L F R F + ++ + Sbjct: 168 RSRIKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRIAGFAIAAPQTRTALFVL 227 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 ++ + + +RD + + KL + S+ G+AG Sbjct: 228 TFLALLAGFIACRYIVTSKLGRVVTAVRDAEMRVMFSGYNPLGYKLFVWTFSAVLCGIAG 287 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A + I+P +I + V +GG +L ++ G L Sbjct: 288 ALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPVIGAFLVNGAKTL--------- 338 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 F F L+ LV L + L Sbjct: 339 -----FTAHFAEYWLFLLGAMFVLVTLYLPDGVTGLWNRLRERR 377 >gi|94309899|ref|YP_583109.1| inner-membrane translocator [Cupriavidus metallidurans CH34] gi|93353751|gb|ABF07840.1| Putative branched-chain amino acid ABC transporter, permease protein [Cupriavidus metallidurans CH34] Length = 400 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 47/369 (12%), Positives = 104/369 (28%), Gaps = 35/369 (9%) Query: 3 IFSLRLNKYDKILCLLAVVYPLLLFLFLG---ATKSQKYIDSMGIQILIYVMFAWGLSIV 59 +FS R+ +L ++ + + L + A Y ++ +I+ + + A L +V Sbjct: 22 LFSTRMWMAMAVLTVVVAIGVPVCALVVPEGHALHLSAYALTLIGKIMCFALAAIALDLV 81 Query: 60 VGSLGLLSLNCVIAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAM 101 G G+LSL + +A+G Y+ + Sbjct: 82 WGYCGILSLGHGLFFALGGYAMGMYLMRSIGRDGVYKSDLPDFMVFLDWKELPWFWHGTE 141 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 +++ L + A + +I + + + Sbjct: 142 HFPYALLLVVLVPGVLAWLFGFFAFRSRIKGVYLSIITQAMTYAAMLLFFRNETGFGGNN 201 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 R F + ++ + ++ + + +RD + Sbjct: 202 GFTDFKRIAGFAVAAPQTRAALFVLTFLALLAGFVACRYIVTSKLGRVVTAVRDAEMRVM 261 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 + KL + S+ G+AGA + I+P + +I + V +GG +L Sbjct: 262 FSGYNPLGYKLFVWTFSAVLCGIAGALYVPQVGIINPSEMSPANSIEMAVWVAVGGRGTL 321 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ G + F L+ LV L ++ Sbjct: 322 IGPVVGAFLVNGAKTMFTAY--------------FAEYWLFLLGAMFVLVTLYLPDGVVG 367 Query: 342 LRTPSNFLE 350 L Sbjct: 368 LWRRLRDRR 376 >gi|323483240|ref|ZP_08088631.1| hypothetical protein HMPREF9474_00380 [Clostridium symbiosum WAL-14163] gi|323403513|gb|EGA95820.1| hypothetical protein HMPREF9474_00380 [Clostridium symbiosum WAL-14163] Length = 296 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 125/305 (40%), Gaps = 33/305 (10%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 YI ++ + I I+ + A L+I+ G G ++ + IGAY+ ++ + WL + Sbjct: 2 SYIITVAVNIAIFTLLALSLNIITGYAGQSAMGHAAFFGIGAYTAALMTNAGIS-FWLSL 60 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + +++ A G ++G+ SL+ R D+LAI T+ ++ + + I G+ V Sbjct: 61 PAAMLVTAAAGGLLGVISLRVRDDFLAITTIGINFVMVALFQNM-KIFGASLGMSVTPPT 119 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +F +LL + L+ + + ++ A ++R++ Sbjct: 120 FFGAKMTPMH----------------FLVLLLILIVLTCLLTRKMTKSWFGLALASLRND 163 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A S + K+ AF + +A G+ GA + I F F+ +I ++S+V++G Sbjct: 164 EGAAMSFGINVSQYKILAFILGTAIAGLTGAIYVHRMTFIFSSSFAFTVSISILSMVVVG 223 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ IL E+ Y L L L++ + Sbjct: 224 GIGTIRGPLLGALILGAAPEVLRFAADY---------------RMILYGGILVLMMRFQP 268 Query: 337 HSLLR 341 LL Sbjct: 269 QGLLG 273 >gi|312139407|ref|YP_004006743.1| ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311888746|emb|CBH48058.1| putative ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 631 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 95/298 (31%), Gaps = 28/298 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 G + + ++G+Q + + A+G++ V+ G + L+ + + G+ Sbjct: 26 GDFLTTNNLLNVGVQASVTAVLAFGMTFVI-VSGGIDLSVGSIAGLSGIVTGWTATTAGV 84 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 +WL + G++ G+ R ATL M + + + + Sbjct: 85 PMWLAVLAGMASGVLAGVVSGILITAGRMPPFI-ATLAMLSVARGLALVIADGR------ 137 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + F+ Y +L + + + L LRRT A Sbjct: 138 -------------PIPVDGWLATLGSGELFGFLPYPVLVLIAAAIATGLILRRTYAGRAM 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 I N +A + ++ +A+S F +AG AA P+ + I Sbjct: 185 YAIGGNAEAARLSGIRVNRQQVLVYALSGLFAAVAGILLAARLASAQPEA-GTGYELDAI 243 Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + V++ GG+ + IL + ++ F + Sbjct: 244 AAVVIGGASLSGGVGTAVGTLIGALILAILRNGLNLLDVSAFWQQVVIGAVIAAAVLF 301 >gi|300310287|ref|YP_003774379.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300073072|gb|ADJ62471.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 347 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 130/320 (40%), Gaps = 16/320 (5%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGS 86 + + S ID++ I L + A GL+++ G G LSL A+GA++ + Sbjct: 34 VVVPWIASAYLIDALLIPFLALSLAAVGLNLLTGYAGQLSLGSAAFMAVGAFAAYNLNLR 93 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 GL + + I ++ + + A G++ GLPSL+ RG YLA++TL Q +L+K+ +N Sbjct: 94 VAGLPLLVSIVLAGLAATAIGLVFGLPSLRLRGFYLAVSTLAAQFFVQWVLVKFSWFSND 153 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + Y L + + + L ++ Sbjct: 154 NPSGVIDAPPLV-------------VGGLAFDTPAGRYLFALAIVTVLTLLCWRLVQSQT 200 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSE 265 + + +RDN++A + ++ KL AFA+SS IG+AG + + P F Sbjct: 201 GHHFIAVRDNEQAARVIGVPVLRTKLLAFAISSFVIGVAGVLWGFVYLRTVEPAGFNLDR 260 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 ++ ++ IVI+GG+ ++ A+++ L + M ++ Sbjct: 261 SLQILFIVIIGGLATIRGAFFGAALIVVFPLLLSRLGSLLLGQWFDSGV-LEMSQRIVLG 319 Query: 326 IALFLVILMRSHSLLRLRTP 345 + +++ L L Sbjct: 320 ALIIFFLIVEPQGLAALWQR 339 >gi|323525067|ref|YP_004227220.1| urea ABC transporter permease UrtC [Burkholderia sp. CCGE1001] gi|323382069|gb|ADX54160.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. CCGE1001] Length = 397 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 100/349 (28%), Gaps = 32/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + L V + L+ Y ++ + + Y + A L +V G G+LSL Sbjct: 52 LIVAFGLGVPFATLVVPQTSPLHLSAYATTITGKFMCYAIAALALDLVWGYCGILSLGHA 111 Query: 72 IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113 + +A+G Y+ + G +++ L Sbjct: 112 LFFALGGYAIGMYLMRSIGHDGKYGSDLPDFMVFLDWHQLPWYWEGTQHLGYALLLVVLV 171 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 + + +I Y + + R FP Sbjct: 172 PAVIAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIGGFP 231 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + + + ++ + + + +RD + L + + KL Sbjct: 232 ITHPGTRTALLLITFAVLIVAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 291 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 292 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNG 351 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F +F + + LV L + ++ L Sbjct: 352 AKSF--------------FTANFPEYWLFFLGLIFVLVPLFLPNGIMGL 386 >gi|89098007|ref|ZP_01170893.1| Branched-chain amino acid transport system permease protein livM [Bacillus sp. NRRL B-14911] gi|89087170|gb|EAR66285.1| Branched-chain amino acid transport system permease protein livM [Bacillus sp. NRRL B-14911] Length = 332 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 125/324 (38%), Gaps = 31/324 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + + L + + + QI I+ +FA I++G G++S + + IGAY+ Sbjct: 15 FIAAALMLLPFVYESRTMLILFTQIFIFAIFAMSYDILLGYTGIVSFGHAMFFGIGAYTA 74 Query: 82 VILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 ++ R +++ L + ++ +++ +GL +L+ + + A+ TL + +F + Sbjct: 75 GVMMKRMEPTMVNLLLAVLLTIVLTAVLSYAVGLLTLRLKSHFYAMLTLAFAGLFLVLAE 134 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 KW+ +T G G + Y++ L L I+ Sbjct: 135 KWRTVTYGNDGFTFRVP-------------------DLLKDRTDFYFICLAAMILVFMIL 175 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + + IR+N++ SL +I K++A + G+AG ++ S ++ Sbjct: 176 SRFTHSPLGRVLQAIRENEQRTESLGYNVIQYKIAASVAAGVIAGIAGMLYSISLRFVNT 235 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +F + + + I+GG+ +L+ ++ ++ + L Sbjct: 236 SVFTMDITLDALLMTIIGGVGTLA---------GAIIGAGIIEFAHHGLTELAKVHWIFE 286 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 R I L ++ +L Sbjct: 287 RWIIFFGIIYILAVMFFPKGILGT 310 >gi|323527858|ref|YP_004230011.1| inner-membrane translocator [Burkholderia sp. CCGE1001] gi|323384860|gb|ADX56951.1| inner-membrane translocator [Burkholderia sp. CCGE1001] Length = 323 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 125/302 (41%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G GLLS + A Y G S L + Sbjct: 26 FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYITGYAMQTLGFSPELGVLAGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++G+ +++ +G Y A+ TL ++++ + ++ Sbjct: 86 CATLLGLVVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +Y+V+L + L+ +I+ + + I++N+ Sbjct: 132 GLQGVPRGKLFGLLDLTSDVALYFVVLTIMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVVVQGFETLSDAYWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + +++ S T + I +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDIGGALASTTGVEWFRSLGESVTIVTGIIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|209517252|ref|ZP_03266096.1| inner-membrane translocator [Burkholderia sp. H160] gi|209502261|gb|EEA02273.1| inner-membrane translocator [Burkholderia sp. H160] Length = 316 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 99/310 (31%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-----W 93 + + + +Y + A G ++V G LG+++ +GA + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNI 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + ++ ++ +G + L A + I + Sbjct: 68 PTLCIALAVAACACAAVGYTIERVAYRPLRRAPKLAPLITAIGVSILLQTLAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + ++ + + +++ + ++L + +T + A R I Sbjct: 128 MSFPQLLPTDPINVIAATKTTAGAVISMTEIVIIVVAFIVMGGLLLLVHKTRLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ M F + + Sbjct: 188 AENPANASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G N + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGKITNDVFG-----SNYQDVFAFIVLIIVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|260222130|emb|CBA31389.1| hypothetical protein Csp_F37280 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 358 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 74/330 (22%), Positives = 131/330 (39%), Gaps = 17/330 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + L+ F + S ++ I LI+ + A G++I+VG G +SL A+ Sbjct: 27 MAIAALLLVGFALVPMLASDYLFRAILIPFLIFSLAAVGVNILVGFCGQISLGSGAFMAV 86 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGA-CGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ R L+ + +S GM+ GLPSL+ +G YLA+ATL Sbjct: 87 GAYAAYNFFVRIEGMPLLVALLLGGVSSMLFGMVFGLPSLRVKGLYLAVATLAAQFFADW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + ++ + TN + + + + + Y L + + A Sbjct: 147 MFLRIQWFTN-------------NSPSGSVSVSNLQVFGLSLESPLAKYIFCLSLLVVIA 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254 + L R A+ W IRD A + ++AKLSAFAVSS +G+AGA + Sbjct: 194 LLAKNLVRGAVGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSFIVGVAGALWGFIYLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY--FNSLLKF 312 P F ++ ++ +VI+GGM S+ A ++ + Sbjct: 254 AWEPAAFSVDQSFRLLFMVIIGGMGSIMGSFFGAAFIVVLPIFLSQFLPALAGLFGFEIS 313 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + +++ H L +L Sbjct: 314 TAAVSHAELMVFGGLIVWFLIVEPHGLAKL 343 >gi|190891910|ref|YP_001978452.1| branched-chain amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190697189|gb|ACE91274.1| putative branched-chain amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 580 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 109/329 (33%), Gaps = 34/329 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL + + L Y S I +++ A I+ G G S + I Sbjct: 4 LLITAPVVAILASLPYLGMADYYLSYLYIIFFWIVLATSWGILSGYTGYWSFGHAAFFGI 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK---FRGDYLAIATLIMSEIF 133 G Y+ L ++ IP +A+++ +++GL + RG++ A+ TL ++ + Sbjct: 64 GVYTTATLTTQLSWPFVATIPAAALLAAVVAVLIGLVVFRSGALRGEFFALLTLSVTFVV 123 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 I+ + + P +Y + Sbjct: 124 AAIVSNTALDSG-----------------TGVFLSGIEIPMIGATASGSLYMFGFIAALV 166 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + ++ + I D++ KL +FAVSSA G GA A Sbjct: 167 ALATSYFIFHSKFGQGLLAIHDDEDVAEVKGVPTFRYKLISFAVSSALAGAMGAIHAVYV 226 Query: 254 DRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 ++ + F + + V+ + ILGG + A I+ + F Sbjct: 227 GYVTVGETFAVTVPLYVVLMSILGGARHWAGPAIGAVIITVMQSAIVSGAHAEFGRAG-- 284 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +AL +VIL+ ++ Sbjct: 285 -----------VALALIVVILVLPSGIVP 302 >gi|291547115|emb|CBL20223.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Ruminococcus sp. SR1/5] Length = 294 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 100/306 (32%), Gaps = 24/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ IY + A G ++V G +L+ +GAY + +R G+S L + Sbjct: 5 SYLKDGISLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYIILTCITRGGMSPILAV 64 Query: 97 PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +S +I G+++ + R +A LI + +L + G Sbjct: 65 ILSVVICTLLGVVIEKVAYSPLRKASSNLAVLITAIGVSYLLQNLALLIFGADAKSFVAV 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + T+ + + +L + + L++++T A + + + Sbjct: 125 IKVPSITLFD---------GELTIKGITIVTILACIIIMVGLSLFVKKTKPGRAMQAVSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + FA+ S +AG + ++P I + Sbjct: 176 DRDAAQLMGVNVNATISLTFAIGSGLAAIAGLLLCQTYPTLTPYT-GAMPGIKAFVAAVF 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ +L + ++ L +V+L++ Sbjct: 235 GGIGSIPGAMVGGILLGIIEIFGKAYISSQVADA-------------IVFAVLIVVLLVK 281 Query: 336 SHSLLR 341 L Sbjct: 282 PTGLFG 287 >gi|84501887|ref|ZP_01000045.1| high-affinity branched-chain amino acid ABC transporter, permease protein, putative [Oceanicola batsensis HTCC2597] gi|84389882|gb|EAQ02516.1| high-affinity branched-chain amino acid ABC transporter, permease protein, putative [Oceanicola batsensis HTCC2597] Length = 320 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 124/317 (39%), Gaps = 15/317 (4%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 + + I ++ +LI + A GL I G G ++L +GAY+ IL Sbjct: 1 MALMLAAPYLVSGRIIAILNMMLISAVIAVGLQICTGYAGQINLGQAAFMGVGAYTASIL 60 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 S+ GL+ L IP++ + + G + GL + + +G YLA+ T+ IF ++ Sbjct: 61 ASKTGLTFLLTIPLAGISAALFGFLFGLTAARIKGFYLALTTIAAQFIFHFAVLNLPSSW 120 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G + LG +Y+ L + + + + R+ Sbjct: 121 MGGSNGITVPPAELLGLRFVGET--------------SQFYLNLAVAAIMIAGAFGIVRS 166 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A+ +RD+ A + + K +AF + + + G+ GA +A + D F Sbjct: 167 RFGRAFVAVRDDDVAAGIMGINVAATKANAFLIGAFYAGVGGALWAYLIRFVGVDQFTLF 226 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT-TL 323 +I ++++I+GGM S+ ++ + E+ + S+ + Sbjct: 227 HSIFFVAMIIVGGMGSIVGALVGVFVIRIIQEIIATVGPNIAESVSFLGGDIVFAGMNVV 286 Query: 324 MVIALFLVILMRSHSLL 340 + + + +++ L+ Sbjct: 287 LGGVIAMFMILEPKGLM 303 >gi|171315844|ref|ZP_02905075.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] gi|171099033|gb|EDT43818.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] Length = 324 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 122/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + V Sbjct: 26 FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLASAGYGTGYAIQTLGFTPELGVLVGTF 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 86 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + + + I+ + + I++N+ Sbjct: 132 GLQGVPRGHLFGLVDLSNDVALYYVVLAVIVAACAFIVRIVHSPFGQVLVAIKENEARAI 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVLVLGFETLSDAHWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + S T + + +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASATGIGWFHSLGESTTIVTGLIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|160900786|ref|YP_001566368.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160366370|gb|ABX37983.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 309 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 99/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y + A G ++V G + L++ +GA + ++ Sbjct: 8 VINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMVGALTSWSCIGLMQEAMPGAPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + +L F + +A L S ++ + + + + Sbjct: 68 LILLLATVIACVVAAALNFVIEKVAYRRLRSSPRLAPLITAIGVSLLLQTLAMIIWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ F + VL+ AS+ + T + A R +N + Sbjct: 128 --KAYPTLLPSTPFEIGTAVITPTQILVLVVTAIALASLTYLVNYTKLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ M F + + + GG+ Sbjct: 186 VAALMGVKPDVVISATFIIGAVLAAIAGIMYASNYGTAHHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G +L + I L +++ +R Sbjct: 245 GNLAGAVVGAMLLGLIESIGSGYIGDLTGGVLG-----SHYTDIFAFIVLIIILTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|291521816|emb|CBK80109.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Coprococcus catus GD/7] Length = 291 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 103/305 (33%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ +G+Y I S GL+ L + Sbjct: 5 SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDIIMVGSYVVYIAVSSLGLNPILSV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +SA+ G+++ + K +A LI + L + G Sbjct: 65 VISAIACLVLGVVIEKVAYKPLRHASKLAVLITAIGVSYFLQNVALLIFGANTKS----- 119 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 S++ + +L + + L++ +T +A + + ++ Sbjct: 120 ------FTSVVPAVSVKLGGITITAETIVTILACVIIMICLTLFINKTKAGHAMQAVSED 173 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 Q A + + FA+ SA +AG ++ ++P I + G Sbjct: 174 QDAAQLMGINVNATISLTFAIGSALAAVAGVLLCSAYPSLTPYT-GAMPGIKAFVAAVFG 232 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + + F L +V++++ Sbjct: 233 GIGSIPGALIGGILLGVIEILSKAYISSQLSDAIVFG-------------VLIVVLVVKP 279 Query: 337 HSLLR 341 +L Sbjct: 280 TGILG 284 >gi|226312175|ref|YP_002772069.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226095123|dbj|BAH43565.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 332 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 125/336 (37%), Gaps = 31/336 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +++ L L + + + QI I+ +FA +++G G++S + + IGA Sbjct: 11 FILFVFLSLAVLPFLSDSRSLYILFTQIFIFAIFAMSFDLLLGYTGIVSFGHCMFFGIGA 70 Query: 79 YSYVILGSRYGL---SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 YS + + L + V+ M+SG ++G+ SL+ + + A+ TL +S++ Sbjct: 71 YSVSLFLKNFDASIGYFLLGVLVAIMLSGILSYVIGMLSLRLKSHFYAMLTLAISQLLFV 130 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + KW+ +T G G F + YYV L + + Sbjct: 131 LAEKWRSLTMGGDGFTFPVPELFRDR-------------------LSFYYVCLLLMVMLF 171 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I+ R+ + + I N++ +L I+ K+ V+ ++G +A Sbjct: 172 VILRAFTRSPLGKVLKAIGQNEQRAEALGYQILHYKVIVSIVAGVVAAISGGLYAVMLRF 231 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++ +F + + + ++GG+ +L + I+ + + Sbjct: 232 VNTQVFSIETTLDALLMSMIGGLGTLFGSILGSGIVELAHHGLTELAKLH---------P 282 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R + + LV+L ++ + Sbjct: 283 IFERWVIFLGLLYILVVLCFPSGIVGSFQEWREKRK 318 >gi|56478452|ref|YP_160041.1| putative ABC-transporter [Aromatoleum aromaticum EbN1] gi|56314495|emb|CAI09140.1| putative ABC-transporter [Aromatoleum aromaticum EbN1] Length = 324 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 62/323 (19%), Positives = 128/323 (39%), Gaps = 24/323 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + LL L + Y + +I+I +FA L ++VG GL+S + I AY Sbjct: 11 ALLATLLVLSIFPLFGSDYYSELLTKIMIMAIFAMSLDLLVGFTGLVSFGHAAFFGIAAY 70 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + V++ +Y + LL+ +A+++ A + + I + + Sbjct: 71 AVVLVSPQYDPASLLLVLPAAVLAAAVAAFVIGLFVLRTKGIYFIMVTLAFAQMIYFVFH 130 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 P+ G G++ + +R + YY+ L + + + Sbjct: 131 DSPLGGGSDGVF---------INFKPELRIGETQLLDLGNAAHFYYLALLLLVATYVFLR 181 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ + +A I+ N+ SL + KL+ F ++ A G+AG A ++P+ Sbjct: 182 ILLRSPLGHALAGIKSNEHRMLSLGFPVFLYKLAGFVIAGALAGVAGFLSACQYGFVTPE 241 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + ++ V+ +VILGG+ +L+ A + + E+ + ++ Sbjct: 242 ILSWHQSGNVLLMVILGGIGTLNGAAIGAFAFVVLQEVFSALTKHW-------------- 287 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 LM + LV+++ L L Sbjct: 288 -QFLMGTVIVLVVMLLPGGLSSL 309 >gi|311107608|ref|YP_003980461.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310762297|gb|ADP17746.1| inner-membrane translocator 45 [Achromobacter xylosoxidans A8] Length = 329 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 118/302 (39%), Gaps = 24/302 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 S+ ++LIY + G ++++G GLLS I + +G+Y+ IL +R GL + L + + Sbjct: 28 SLATEVLIYSLAVLGCNLLLGFTGLLSFGQGIFFGLGSYAVGILLTRTGLPMPLALLAAM 87 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++ ++G +++ RG Y + TL +++F + +T G G+ R F Sbjct: 88 VVGALGATLVGWFAIRQRGTYFVMLTLAFAQMFYFLAYSLPDLTGGDNGLLDVPRPAFSV 147 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + Y + + ++L + + IRDN+ Sbjct: 148 A---------GMELMPLATPWQFYAFVAVCFLVVFWLLLRVTNSVFGRTLLAIRDNEARA 198 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + KLSAFA+S A +AGAF A ++ + +++ + ++GG + Sbjct: 199 MAVGYNVRLFKLSAFAISGAVTALAGAFLAMMTGIAPLSSIEYHSSEMILVMTVIGGTGN 258 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L A + + + + L+ L V L L Sbjct: 259 LFASVLGAAFYVLFADWLSTLWPRW---------------LMLLGFLLIAVSLFMQKGLW 303 Query: 341 RL 342 L Sbjct: 304 GL 305 >gi|183602256|ref|ZP_02963623.1| branched-chain amino acid ABC-type transport system permease components [Bifidobacterium animalis subsp. lactis HN019] gi|241190194|ref|YP_002967588.1| branched-chain amino acid ABC-type transport system permease [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195600|ref|YP_002969155.1| branched-chain amino acid ABC-type transport system permease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218470|gb|EDT89114.1| branched-chain amino acid ABC-type transport system permease components [Bifidobacterium animalis subsp. lactis HN019] gi|240248586|gb|ACS45526.1| branched-chain amino acid ABC-type transport system permease component [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250154|gb|ACS47093.1| branched-chain amino acid ABC-type transport system permease component [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793181|gb|ADG32716.1| branched-chain amino acid ABC-type transport system permease component [Bifidobacterium animalis subsp. lactis V9] Length = 478 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 80/302 (26%), Gaps = 24/302 (7%) Query: 44 IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103 I L+ + A G+++V G+ GL S + +G + + + L + I Sbjct: 199 IFGLMLGLMAVGMNLVYGTTGLSSFSHGEQVTLGGLMAYVGTQMLHMPVVLSAIFAVAIG 258 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 G + M I A Y+ + Sbjct: 259 ALAGWVQNQLVWAPLRHKRVGVMQQM----------IVTIGLSMALQYIYQFFFGGDIKG 308 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 ++ S+ ++L T + A R + DN + Sbjct: 309 IVKSVPEGIQLGPIVTNAPTLIAAAIALVTIVSVTVFLYCTRLGRATRAVSDNAALAAAS 368 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + + +S ++G + I+ + + +++ + V LGG+ + + Sbjct: 369 GINVDSVVRIVWILSCGLAALSGVLIGIHLNGIAWNT-GVTLLMLMFAAVTLGGLGTANG 427 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 I+ V ++ + + R + + Sbjct: 428 ALVGALIVGIVADMSTLVIPSDMRYASALAILILVLLI-------------RPQGIFGKQ 474 Query: 344 TP 345 Sbjct: 475 KR 476 >gi|85703573|ref|ZP_01034677.1| putative permease abc transporter protein [Roseovarius sp. 217] gi|85672501|gb|EAQ27358.1| putative permease abc transporter protein [Roseovarius sp. 217] Length = 335 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 122/310 (39%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +G S I + Sbjct: 48 FVMKLLCFALFAAAFNLLLGYTGLLSFGHSAFFGGAAYFTAHAVKEWGWSPEFGILLGVA 107 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+IMG +++ +G Y A+ TL +S++F ++ Sbjct: 108 GAAGLGLIMGAIAIRRQGIYFAMITLALSQMFFFFCLQAGFTKG--------------ED 153 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MYY +LG+ L II + + ++IR+N+ Sbjct: 154 GIQSVPRGELFGFIDLSDATNMYYFVLGVFLLGMVIIWRIVNSPFGMILKSIRENESRAT 213 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL+AF +S+A G+AG + + + + VI + +LGG+ +L Sbjct: 214 SLGYSVTRYKLTAFVMSAALTGLAGGIKSLVFQFATLTDVTWQMSGEVILMTLLGGIGTL 273 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I++ + +F T + + + +L+ L+ Sbjct: 274 IGPIFGAGIVVTLQNYLATSDFPV---------------TIITGVVFMVCVLLFRRGLVG 318 Query: 342 LRTPSNFLER 351 S R Sbjct: 319 EFYASRLGRR 328 >gi|295677428|ref|YP_003605952.1| inner-membrane translocator [Burkholderia sp. CCGE1002] gi|295437271|gb|ADG16441.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 316 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 102/310 (32%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 I + + +Y + A G ++V G LG+++ +GA + Sbjct: 8 ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + ++ +I+ A ++G + L A + I + Sbjct: 68 LTLVIALVIAAAVCAVVGYTIERVAYRPLRRAPRLAPLITAIGVSILLQTLAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L T + + + + +++ + ++L + +T + A R I Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISMTEIVIIVVAFVVMGGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + + F + F + SA +AG A+ M F + + Sbjct: 188 AENPNVASLMGVSPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + I L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIVVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|192292555|ref|YP_001993160.1| urea ABC transporter permease [Rhodopseudomonas palustris TIE-1] gi|192286304|gb|ACF02685.1| urea ABC transporter, permease protein UrtC [Rhodopseudomonas palustris TIE-1] Length = 391 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 107/360 (29%), Gaps = 38/360 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFLFL------GATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 L++ + +L +LL L A Y+ S+ + + Y + A + ++ G Sbjct: 10 LDRGATVFLVLLAAIGILLPLLNLLTPESSALHVPTYLISLFGKYVCYALLALSIDLIWG 69 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G+LSL +A+G Y+ + R + + + LP + D Sbjct: 70 YCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYANPTLPDFMVFLNWKELPWYWYGFDM 129 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162 A +++ + + + + + D + Sbjct: 130 FWFAAVMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + F ++ + + I + + + IRD + Sbjct: 190 LTDFKDILGFNVQADGTRAALFMLSCLALAIGFFICRAVVTSKLGKVLIAIRDAESRTRF 249 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L + KL F +S+ G+AGA + I+P F +I + V +GG +L Sbjct: 250 LGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWVAVGGRGTLV 309 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A ++ + ++ V L+ ++ Sbjct: 310 GAALGAIVVNYAKTVFTS-------------GPLAPYWLFMLGALFVAVTLLLPKGIVGT 356 >gi|120610555|ref|YP_970233.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120589019|gb|ABM32459.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Acidovorax citrulli AAC00-1] Length = 309 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ IGA + ++ Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGLMQEAMPGAPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + +L F + +A L S ++ + + + + Sbjct: 68 VILLLATIIACVVAAALNFTIEKVAYRPLRSSPRLAPLITAIGMSILLQTLAMIIWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ F + +L AS++ + T + A R +N + Sbjct: 128 --KPYPTLLPTTPFQIGGAVITCTQVLILAVTAIALASLVYLVNYTKLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ M F + + + GG+ Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G LL + I L +++ +R Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGTLTGGLLG-----SNYTDIFAFIVLIIILTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|33595628|ref|NP_883271.1| branched chain amino acid ABC transporter permease [Bordetella parapertussis 12822] gi|33565706|emb|CAE40354.1| probable permease component of branched-chain amino acid transporter [Bordetella parapertussis] Length = 320 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 15/294 (5%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y I + GL +V G G +SL A+G Y IL +R G+ ++ Sbjct: 24 PEYQLYQVSLIAATAIIVLGLVVVCGIAGQISLGQAAFVALGGYGAAILATRLGVPLYAG 83 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 IP++A I G ++GL +L+ G YLA+AT+ ++ I Q +I +T G AG+ + Sbjct: 84 IPLAAAICALLGYLLGLATLRVSGHYLALATMAVTAIVQLAVINLDDLTGGAAGMPMPPL 143 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +Y V++ + LS +++ L R+ I A+ +R Sbjct: 144 EIAGHV---------------LDNGASLYLVIVPVFALSYALVRNLMRSRIGRAFGAVRQ 188 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A ++ ++ K SAFA S + G A + P + ++ + ++I ++ Sbjct: 189 GEIAAAAMGVNVLHYKASAFAASGFLGALGGGLLGALSSYLDPSQYGITQTVYYLAIAVV 248 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 GGM S +AI + + E+ G+ Y +F M + + Sbjct: 249 GGMASPLGALIGSAIFVFIPEVLQGLQSYLGLVFALLLLAFIMLRPAGLASFIV 302 >gi|264680645|ref|YP_003280555.1| membrane protein [Comamonas testosteroni CNB-2] gi|262211161|gb|ACY35259.1| Integral membrane protein [Comamonas testosteroni CNB-2] Length = 402 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 101/351 (28%), Gaps = 33/351 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + L L +V + L L A Y+ + + + Y + A + ++ G G+ Sbjct: 22 WTAFLLTLTMVCAVAPALNLWVPEDSALHLSDYMLGLLGKFMCYAICALAIDLIWGYTGI 81 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSI-----------WLLIPVSAMISGACGMIMGLPS 114 LSL + +A+G Y + R W +P +SG+ + L Sbjct: 82 LSLGHGLFFALGGYVMGMYLMREAAGPDALPAFMGFLDWKELPWHWALSGSFAATVLLVF 141 Query: 115 LKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 L +I + + + Sbjct: 142 LVPGLIGGLFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTGFKTLLG 201 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + + ++ + WL R+ + +RD + + K Sbjct: 202 FSVNSQAMHVLLFALSGLALLGCFLFSRWLMRSKYGRVLQAVRDAESRTMFCGYNPLPYK 261 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 LS + +S+ G+AGA + I+P +I + +GG SL + Sbjct: 262 LSIWVISAMMCGLAGALYVPQVGIINPSEMSVGNSIEMAVWTAVGGRASLVGPIIGAFAV 321 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G + ++ +V L L+RL Sbjct: 322 NGGKSWLT--------------VAAPEYWLYVLGALFIVVTLFMPGGLIRL 358 >gi|121609821|ref|YP_997628.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gi|121554461|gb|ABM58610.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 604 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 111/306 (36%), Gaps = 22/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + ++ I I + A GL ++ G G S I AY+ L + GLS WL + Sbjct: 25 SFTIALLNDIGIGALVALGLVLLTGIGGATSFGQAAFVGIAAYASAWLSTAQGLSPWLGL 84 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++G + +G+ +L+ G +L ++T+ + + + G+ L Sbjct: 85 VFALLLTGLSALAIGMLTLRLGGHFLPLSTIAWGLSIALLFGNVEQL-GRHTGLSNIPPL 143 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + MYY++ + L+ L + A R++R Sbjct: 144 H--------------LGGWSLARPQAMYYLIWTLLALALLFCHHLLHSRPGRAIRSLRGG 189 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 S+ +L+ F +++F G+AG +A +SP F +I + + + G Sbjct: 190 ATLLASVGADAYRVRLTLFVTAASFAGLAGWLYAHMNRFVSPSPFDIHASIEYLLMAVAG 249 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ LS A+++ + + + + + + Sbjct: 250 GLGQLSGALAGAALVLVLKNGLQDLLPMFTQRAGQLQAIAFAAGFIAL-------LHFAR 302 Query: 337 HSLLRL 342 L+ L Sbjct: 303 GGLMGL 308 >gi|71905913|ref|YP_283500.1| inner-membrane translocator [Dechloromonas aromatica RCB] gi|71845534|gb|AAZ45030.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Dechloromonas aromatica RCB] Length = 319 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 95/306 (31%), Gaps = 10/306 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Q IY + A G ++V G +GL++ IG ++ S+ Sbjct: 20 IINGLVQGSIYALVALGYTMVYGIMGLINFAHGEVVMIGT----LVTITVAGSLIKAGMP 75 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+ A L + IA + + + + Sbjct: 76 VALAGLAGVSASVLVCMALGWGLERIAYRPLRNAPRLTPLITAIGMSIVLQNLAMMIWGR 135 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T L+ F + + ++L ++L + RT + A R N Sbjct: 136 NYLTFPPLLPKMDFEFAGANFTAIQVIIVLVSAATMGGLLLLVYRTKLGMAMRATAQNPA 195 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I +AF + SA +AG + I+ F + + +LGG+ Sbjct: 196 VASLMGVNINRVIAAAFVIGSALGALAGVMVGGYYE-IAHYQMGFMLGLKAFTAAVLGGI 254 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G L + I L +V++ + Sbjct: 255 GNLGGAMLGGILLGIIEALGAGYIGDLTGGFLG-----SHYQDIFAFIVLIVVLMFKPSG 309 Query: 339 LLRLRT 344 L +T Sbjct: 310 LFGEKT 315 >gi|269838171|ref|YP_003320399.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] gi|269787434|gb|ACZ39577.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] Length = 389 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 66/371 (17%), Positives = 137/371 (36%), Gaps = 46/371 (12%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQK----YIDSMGIQILIYVMFAWGLSIVVG 61 ++ L + AV ++L + + S ++ + I + A GL++ G Sbjct: 1 MKEASKTTKLIVAAVTVAMILLPLIHSGGSVTAVIGFLVPFVTTVAILAIIAIGLNVQWG 60 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRY--------------------------GLSIWLL 95 G+ + V + +GA+ I+ L Sbjct: 61 YTGIFNFGVVGFFMVGAFVAAIVTKSPADSEFVQYVGGFGDRLAFLPFLDSREWLPFIFG 120 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +A+ S +++ L +L+ R DYLAI T+ ++E+ + + I+ + NG G+ R Sbjct: 121 VLAAALASALLALLLALSALRLREDYLAITTIGVAEVLRRVTIEETWLVNGTRGLTGIPR 180 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 +Y + L M FL ++ + R +R+ Sbjct: 181 PLAGW-------------FEPNVYRFVFLGLALAMLFLVYLMVERGISSPWGRVLRALRE 227 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-KFSENIIVISIVI 274 ++ + + K+ F + +A +G GAFFA + ISP+ F F I+ ++++ Sbjct: 228 DEDVVAASGKNVFAFKVQGFVLGAAIMGAGGAFFAFQQGAISPETFTHFFGTFIIWAMLV 287 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 LGG + T ++ G + + + + SF ++ + +V+L Sbjct: 288 LGGSGNNVGAVVGTFVVWGFWSITLQIQSFKLPVFIVDRISF--FRDFIIGALIVVVLLA 345 Query: 335 RSHSLLRLRTP 345 L+ R Sbjct: 346 GPKGLVPERAR 356 >gi|222082648|ref|YP_002542013.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727327|gb|ACM30416.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 556 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 81/323 (25%), Positives = 147/323 (45%), Gaps = 36/323 (11%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-- 89 + ++ + + + +Y++ GL+I +G GL+ L V +A+GAY+ +L S Sbjct: 256 PMITSDFVAQIAMLVALYMLMGMGLNIELGLAGLVDLGFVAFFAVGAYTIALLCSDGPLA 315 Query: 90 ---LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPIT 144 +S WL +P++ ++ G + GLP L+ RGDYLA+ATL + EI + +++ PI Sbjct: 316 IADISFWLAMPIAIGLAATAGFLFGLPVLRVRGDYLAMATLGLGEIVRVLVLSDALAPIL 375 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G+ R + + + F I L+R+ Sbjct: 376 GGSQGVIGIKRPMLGDIVLNQPTELYYLALALAAVVAF--------------ISWRLQRS 421 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 I AW +R+++ +L + +KL A+ V +AF G AGA FA + P F+ Sbjct: 422 RIGRAWLALREDEDVAQALGIDPVASKLIAYTVGAAFAGAAGAVFAVLIGSVFPSSFQLL 481 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 +I V++I+++GG+ SL + A+LIG+ EL + Sbjct: 482 VSINVLAILVIGGLGSLPGVLVGAAVLIGLPELLREFGEF---------------RYLFY 526 Query: 325 VIALFLVILMRSHSLLRLRTPSN 347 +AL +++ +R+ L ++ S Sbjct: 527 GLALVVMMHVRAEGLWPVKVASA 549 >gi|149915787|ref|ZP_01904312.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. AzwK-3b] gi|149810369|gb|EDM70214.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. AzwK-3b] Length = 657 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 104/322 (32%), Gaps = 26/322 (8%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 L ++ I I+ + A GL+I G +G++++ +GAY+ ++ Sbjct: 357 MLAVYQTLDLILDGVSLASIFFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFI 416 Query: 89 GLS---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + + +P++ ++ G+ M + + TL+ + L + Sbjct: 417 PDYTLSLLVALPLAFAVTFGAGVTMERLVI-RHLYTRPLETLLATFGISIALQQLAKNIF 475 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G + + + V + + A ++ L+RT Sbjct: 476 GTQARPLTAP---------DWLGGAITLNDIVGISTIRVAIFVLALIFLALLLYVLKRTR 526 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + R + N S+ + F + S G+AG S + Sbjct: 527 LGLEVRAVTQNPGMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLYAQVTSEMGANYIV 586 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + +V + ++ +++ + + +N S + T MV Sbjct: 587 QSFMTVVVGG--VGNVWGTLAGASMIGFLQKGIEWLNP-----------SNTLAAQTYMV 633 Query: 326 IALFLVILMRSHSLLRLRTPSN 347 + + L I +R ++ L+ + Sbjct: 634 LFVILFIQVRPKGIVALKGRAA 655 >gi|332531346|ref|ZP_08407254.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332039210|gb|EGI75628.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 306 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 11/305 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G +GL++ +GA + + + + Sbjct: 8 IINGLVLGSMYALVALGYTMVYGIIGLINFAHGEVLMVGALVSWTVIGFIQPLLPPWLVL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + AC + L R Y + + + I+ + Sbjct: 68 LVALVVACLVAAVLNYTIERVAYRPLRNSPRLAPLITAIGMSILLQTLAMIIWKPN---- 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +L+ +L+ A ++ + T + A R +NQ+ Sbjct: 124 -YKSYPTLLPSEPISLGGASITPTQIMILVVTALTLAGLVWLVHGTKLGRAMRATAENQR 182 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ + M F I + +LGG+ Sbjct: 183 VAALMGVQPNRVISATFVIGAMLAALAGVMWASNYGTVQHAM-GFIPGIKAFTAAVLGGI 241 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G +L + L +V+ +R Sbjct: 242 GNLAGAVVGGILLGLIESIGAGYIGDLTGGVLG-----SHYVDIFAFAVLIVVLTLRPSG 296 Query: 339 LLRLR 343 LL R Sbjct: 297 LLGER 301 >gi|299065177|emb|CBJ36342.1| putative Branched-chain amino acid transport system permease, membrane component (livM) [Ralstonia solanacearum CMR15] Length = 328 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 129/325 (39%), Gaps = 16/325 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++Y LLL + A + Y + ++L + +FA ++++G GLLS + Sbjct: 9 FILYGLLLAALIVAPLAGAYPVFVA-KLLCFALFASAFNLLLGYTGLLSFGHAAFFGGAG 67 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y L L+ L + G+++GL +++ +G Y A+ TL ++++F + Sbjct: 68 YVAGYLMRDLNLTPELGLLAGTAAGALIGLVVGLLAIRRQGIYFAMITLALAQMFYFFCL 127 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + T G+ G+ R + ++ +YY +L + ++ ++ Sbjct: 128 QAP-FTGGEDGLQGVPR-------------GKLLGMLDLSSDLTLYYFVLAVVVVAFLLV 173 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + + I++N+ SL KL AF +S+A G+AGA + Sbjct: 174 VRTIHSPFGQILKAIKENEPRAISLGYDTDRFKLLAFVLSAALSGLAGALKTLVLGFETL 233 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FN 317 ++ + VI + ++GG+ LS A++I + + + + Sbjct: 234 TDVHWAMSGSVILMTLVGGLGILSGPILGAALVIALENKLGDLGAFLAGVTGMDGFNVLG 293 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 TT+ + +L ++ Sbjct: 294 ESVTTVTGAIFVICVLTFRRGIMGE 318 >gi|330957690|gb|EGH57950.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas syringae pv. maculicola str. ES4326] Length = 214 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 23/224 (10%) Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYV 186 L IT G GI ++ F G ++ FF P + + IF+Y + Sbjct: 1 MFLRNLTDITGGPNGISNIEKPTFFGLIFERKAAEGMQTFHEFFGLPYNSINKVIFLYLI 60 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 L + + +I L R I AW +R+++ A +L KLSAF + +AF G AG Sbjct: 61 ALLLALAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAG 120 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +FFAA + I+P+ F F E+ I+++IV+LGGM S + A ++I + EL + Y Sbjct: 121 SFFAARQGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-- 178 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + L+++ R L ++ P L+ Sbjct: 179 -------------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 209 >gi|146296947|ref|YP_001180718.1| inner-membrane translocator [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410523|gb|ABP67527.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 294 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 90/289 (31%), Gaps = 10/289 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ + +GAY + + L + + + Sbjct: 8 LINGITLGSVYALIALGYTMVYGIIKLINFAHGDVFMVGAYIAFLCVTYLKLGLLPALII 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + GM++ + K + I+ LI + L + G + Sbjct: 68 SMIFCALLGMLIEKFAYKPLRNSPRISALITAIGVSLFLENLMQLLMGADSKVFPRLVNE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V+ Y+L+ L + ++ T I A R + + Sbjct: 128 KNYHLFH---------GKVVVNSKQIYLLVITVLLMLLLNFIVKNTKIGKAMRAVSQDMD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G + I+P M + + GG+ Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAGGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + L + L G + + F + + Sbjct: 238 GIIPGAMLGGFSLGVIETLVSGYGSSMYKDAVAFALLILILILKPSGLL 286 >gi|319790791|ref|YP_004152431.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315593254|gb|ADU34320.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 317 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 128/327 (39%), Gaps = 24/327 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 V L + + Y ++++I +FA L ++VG GL+SL Y Sbjct: 5 GAFLVPLACALLIGIAGPLMGNYASDFVVKVMILSIFALSLELLVGMTGLVSLGHAAFYG 64 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY V+ G + LL+P++ + + +G SL+ RG Y + TL +++ Sbjct: 65 IGAYVTVLASGSEGGNFALLLPMAVGAAALYALFVGALSLRTRGVYFIMVTLAFAQMAFF 124 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + G GIY+ R + + ++YV+L + Sbjct: 125 VFHD-TKVGGGSDGIYMYVRPAIGALDLENRT--------------VLFYVVLASLVFTY 169 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ +RR+ A IR N++ + + KL+AF ++ A G+AG A+ Sbjct: 170 GLLALIRRSRFGAALAGIRVNEQRMRAAGFPVYGYKLAAFVLAGALAGLAGFLLASRDGV 229 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P++ + + V+ +VILGG+ L + E+ Sbjct: 230 VNPELMAWHNSGEVLLMVILGGLGHLRGAVIGAIAFTLLKEIFST---------HAVMGP 280 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + IA+ + + L+ L Sbjct: 281 LADHWQLTLGIAIIVFVAWLPKGLIGL 307 >gi|167586401|ref|ZP_02378789.1| inner-membrane translocator [Burkholderia ubonensis Bu] Length = 452 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ Sbjct: 178 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRFAPAAFDWYPLVAVPASFAAAALVGIV 237 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + S + + Sbjct: 238 LER--LVLRHLYGRPLETLLATFGVSLILIQAMRMLFGAQNVQVVNPSWMSGGVTVMQNL 295 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 296 ILPYNRLVILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 355 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L V + Sbjct: 356 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 413 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 414 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 451 >gi|239813104|ref|YP_002942014.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239799681|gb|ACS16748.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 324 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 65/330 (19%), Positives = 131/330 (39%), Gaps = 24/330 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 V + + + Y+ ++++I +FA L ++VG GL+SL Y Sbjct: 12 GAFLVPVACAIAIGVLGPLMGNYVSDFVVKVMILSIFALSLELLVGMTGLVSLGHAAFYG 71 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY V+ G ++ LL+P++ + + +G SL+ RG Y + TL +++ Sbjct: 72 IGAYVTVLASGSEGGNLALLLPLAMGAAALYALFVGALSLRTRGVYFIMVTLAFAQMAFF 131 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + G GIY+ R + + + ++Y++L + Sbjct: 132 VFHD-TKVGGGSDGIYMYVRPAIGKLDMENRM--------------VLFYIVLASLVFTY 176 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ +RR+ A IR N++ + + KL+AF ++ A G+AG A+ Sbjct: 177 GLLALVRRSRFGAALAGIRVNEQRMRAAGFPVYGYKLAAFVLAGALAGLAGFLLASRDGV 236 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P++ + + V+ +VILGG+ L + E+ Sbjct: 237 VNPELMAWHNSGEVLLMVILGGLGHLRGAVIGAIAFTLLKEIFST---------HAVMGP 287 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + IA+ + + L+ L Sbjct: 288 LADHWQLTLGIAIIVFVAWLPKGLIGLAKR 317 >gi|254488829|ref|ZP_05102034.1| ABC transporter permease protein [Roseobacter sp. GAI101] gi|214045698|gb|EEB86336.1| ABC transporter permease protein [Roseobacter sp. GAI101] Length = 311 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 115/292 (39%), Gaps = 14/292 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + LL F+ Y+ + I+ ++ + A L +++G G++SL Sbjct: 1 MIVAAVIFGLLLAMPFVLPLVGGAYLTGLLIKAMLLAIAAISLDLLIGHGGMISLGHAAF 60 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +GAY+ I +I +L+ ++ +++G +I G +L+ G Y + TL ++ Sbjct: 61 VGVGAYAAAIGLENGVENILVLLVITLVVTGTVALITGSLALRTSGVYFLMITLAFGQMI 120 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 L + F S V +Y+V+LG Sbjct: 121 YFTLTSLAAYGG--------------DDGLTLWSLATLFGSDIVQGGSGLYFVVLGTLLA 166 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + + + R RDN + ++ +L A+ +++ G++G Sbjct: 167 TWWGVYRISLSRFGRVLRAARDNPGRAEVMGYSVTRYRLIAYVIAAMIAGVSGLLLVQHA 226 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 + +SP + + + +I +++LGG+ S + ++ V E+ G + Sbjct: 227 EFVSPALATWQRSGDLIVVIVLGGLGSRNGAILGAFFIVIVEEVLGGFFHEW 278 >gi|121611556|ref|YP_999363.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121556196|gb|ABM60345.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 310 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 122/305 (40%), Gaps = 29/305 (9%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + ++L++ A + + G G L+L+ Y +GAY+ VIL + GL + L Sbjct: 23 AYHTDVYRKLLLWSALALSFNFLFGISGQLALSHFTFYGLGAYAIVILSHQVGLPLPLAA 82 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + + +P+ + G YLA+ATL ++++ +L + +T G G+ Sbjct: 83 MGALALCIVVSAAVAIPATRLEGFYLALATLALAQLVTVLLNEGGALTGGSNGLANYGVP 142 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F + + + ++ + L+ ++ L R+ A R +RD+ Sbjct: 143 S---------------VLGFRLEGMNLTAAVILLLVLTFGLLRRLDRSQFGRACRAVRDD 187 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + K++A+ ++S AG +A ++P F +++ VI+G Sbjct: 188 PAVASAMGIDVSRTKIAAYMLASCLAAAAGMCYAFVDRNVNPAAFGIEYGFLLLFAVIVG 247 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S ++ + + + H + I + L++L+ Sbjct: 248 GVGSQWGAIFGGVLVFVLPLFLAPLIGH--------------YHALIFGIVVVLIMLLEP 293 Query: 337 HSLLR 341 L+ Sbjct: 294 RGLVG 298 >gi|299134327|ref|ZP_07027520.1| inner-membrane translocator [Afipia sp. 1NLS2] gi|298591074|gb|EFI51276.1| inner-membrane translocator [Afipia sp. 1NLS2] Length = 334 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 119/327 (36%), Gaps = 29/327 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L L + +Y ++ QI+I + A L++++G G++SL Sbjct: 6 LNWMVWLAGFAALLALPWLVTSEYYINIASQIVIAAILALSLNLLIGFGGMISLGHAAYL 65 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + AY + L ++ G ++ + A M+ G SL+ G + TL + +I Sbjct: 66 GVSAYLAIYLTAQAGFGQLSGALIAIGGTTALAMLFGYLSLRASGLGFLMITLALGQILW 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I +W +T G G+ R + G + YY +L L+ Sbjct: 126 GIAYRWASLTGGDNGLGGMKRPHPFGLDLTH--------------PAIFYYFVLFFLGLA 171 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I ++ + + + RD + +L + + +F + + +AG +A Sbjct: 172 LWCIARFIQSGLGQSLQGTRDQPRRMRALGYNVWLIQWLSFVFAGFWGAVAGLLYAYYHQ 231 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP + + + +VI GG +L A+++ + + + Sbjct: 232 FVSPQTLHLTTSAEALLMVIAGGTGTLFGPVVGAALVVILKNVVSAYITRW--------- 282 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ ++L LL Sbjct: 283 ------LILLGAIFVAIVLFMPEGLLP 303 >gi|296110587|ref|YP_003620968.1| branched-chain amino acid ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832118|gb|ADG39999.1| branched-chain amino acid ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] Length = 290 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 102/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GAY ++ ++ + + Sbjct: 6 LINGVILGSVYALLALGYTMVYGIIKLINFAHGDIYMLGAYFGYFFLRVMHMNFFIALIL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S I GM++ + + IA LI + L G Sbjct: 66 SMAICAVLGMLIEFIAYRPLRHSPRIAVLISALGVSFFLENGMSYLFGSD---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + I+ ++ + ++ L + + +++T + A R + +++ Sbjct: 116 -KRSFPQAIKTIQYHFGSLQISNIQIIIISTAIILMILLNIIVKKTKMGRAMRAVSADEE 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G + I P M + I +LGG+ Sbjct: 175 AAILMGINVNRTISFTFAIGSALAAAGGVLIGLYYNNIDPLM-GMTPGIKAFVAAVLGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + + + ++ L +V+L + Sbjct: 234 GIIPGAALGGWLIGILETMTQAVG-------------LSNYKDAIVYAILIVVLLFKPTG 280 Query: 339 LLR 341 +L Sbjct: 281 ILG 283 >gi|254473724|ref|ZP_05087119.1| branched-chain amino acid ABC transporter, permease protein [Pseudovibrio sp. JE062] gi|211957110|gb|EEA92315.1| branched-chain amino acid ABC transporter, permease protein [Pseudovibrio sp. JE062] Length = 351 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 118/333 (35%), Gaps = 11/333 (3%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 ++ L +F +I I+++ +++G G++S + + IG Sbjct: 18 AVLLLILFGLMFAPFLFPGTRSLDTAARICIFIVLVASYDLLLGYTGVVSFAHTMFFGIG 77 Query: 78 AYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY + +I L A+++GA ++ L SL+ + + A+ TL ++ F Sbjct: 78 AYGTALALVNMGASYSAIVLGTVCGAVVAGAFAFVIALFSLRVKAIFFAMMTLAVASAFL 137 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ + IT G+ G+ + + ++ YYV+ Sbjct: 138 VLISQLSGITGGEDGLSYRIPREMTPAFKLVKEKVLGVRLNG---KLITYYVVFFSSLCL 194 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++L + + + IR+N ++ ++ + A +S+ +AG+ A Sbjct: 195 FLVLLRMVNSPFGRVLQAIRENAFRAEAIGYKVVRYRSVATILSAVVAALAGSLMAIWLR 254 Query: 255 RISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSL 309 P + ++ +V++GGM S+ + + + L + + Sbjct: 255 YTGPATTLSMDIMVDILLMVVIGGMGSMYGAVIGAVLFLLTQSYLQNLLGILQESLGSLP 314 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + R + I I ++ Sbjct: 315 VVSEVVSPERWLLWLGILFICSIYWFPKGVVGR 347 >gi|172059856|ref|YP_001807508.1| urea ABC transporter permease protein UrtC [Burkholderia ambifaria MC40-6] gi|171992373|gb|ACB63292.1| urea ABC transporter, permease protein UrtC [Burkholderia ambifaria MC40-6] Length = 394 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 95/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I V L+ A Y ++G +++ Y + A L +V G G+LSL + Sbjct: 51 IAIGAGVPLAALVAPESSAFHLSAYAMTLGGKLMCYAIAALALDLVWGYCGILSLGHGLF 110 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 111 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 170 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I + + + R F + Sbjct: 171 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRIAGFAIT 230 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 231 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 290 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+ G+AGA + I+P +I + V +GG +L + G Sbjct: 291 TLSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 350 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 351 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 383 >gi|46198389|ref|YP_004056.1| branched-chain amino acid transport system permease protein livM [Thermus thermophilus HB27] gi|46196011|gb|AAS80429.1| branched-chain amino acid transport system permease protein livM [Thermus thermophilus HB27] Length = 366 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 89/238 (37%), Gaps = 15/238 (6%) Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 G + G P + + YLA+ATL +F+ + + G A L Sbjct: 124 GLLRVPGGHPEPRVKHLYLAMATLAFQVVFEWTVGHLPLLNQGGAMPLPRVGLLGYEVGF 183 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 R+ F+ YYV + L A L RT A +RDN +A ++ Sbjct: 184 RNHYHFW-------------YYVSFAVLVLLALFFRNLLRTKYGRALVAVRDNDRAADAM 230 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 KL AFA+ + + G+AGA +A + + + FS +I ++++ I+GG+ +L Sbjct: 231 GMDPGRTKLFAFALGAFYAGVAGALYAYLSRAVVIEDYTFSVSIKLLAMAIVGGLGTLVG 290 Query: 284 IAKATAILIGVVELCCGMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 A L + ++ + + + + L ++ L Sbjct: 291 SFLGPAFLELLDVNMEALSNLIKALGFSVAGVDVASALRPLAFGLVIVLFLVFEPRGL 348 >gi|304394450|ref|ZP_07376371.1| inner-membrane translocator [Ahrensia sp. R2A130] gi|303293360|gb|EFL87739.1| inner-membrane translocator [Ahrensia sp. R2A130] Length = 331 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 101/302 (33%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LAV+ L + + + + ++ +I I + A GL++ +G+ GL+S + G Sbjct: 13 LAVLLMLPAAVLWASATGETFTITLATRIAILAIAATGLNLALGNGGLVSFGHAAFFGAG 72 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y IL S S L+ + ++ L ++ A+ L Sbjct: 73 GYVCGILASHAFTSEPLMTVPFLIEGTKSMPVIWLVAIVVSALLAALIGLFALRTAGVYF 132 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + G FP + + + V + L + Sbjct: 133 IMLTLAFAQMIYYFAISFPGYGGEDGLPTYVRNGFPGLNTLVPLPFFIVCFVVLALVIWL 192 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + A R N + ++ + AF +S A G+AGA + +S Sbjct: 193 VDRFTHSRFGLALAAARQNGERLEAVGIAPFRIRYVAFILSGAITGLAGALYTDLNRFVS 252 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P M + + +I +ILGG L A+ + + G ++ + Sbjct: 253 PSMLSWQTSGELIVFIILGGTARLFGPLLGAALFVVLENTLGGWTEHWQFFVGLILLGVV 312 Query: 318 MR 319 + Sbjct: 313 LF 314 >gi|172059155|ref|YP_001806807.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] gi|171991672|gb|ACB62591.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] Length = 324 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 123/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + V Sbjct: 26 FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLATAGYGTGYAIQTLGFTPELGVLVGTF 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 86 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTRGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + + + I+ + + I++N+ Sbjct: 132 GLQGVPRGHLFGLVDLSNDVALYYVVLTVIVAACAFIVRIVHSPFGQVLVAIKENEARAI 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVLVLGFETLSDAHWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + + S T + + +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASVTGIGWFHSLGESTTIVTGLIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|187922953|ref|YP_001894595.1| urea ABC transporter permease [Burkholderia phytofirmans PsJN] gi|187714147|gb|ACD15371.1| urea ABC transporter, permease protein UrtC [Burkholderia phytofirmans PsJN] Length = 394 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 102/349 (29%), Gaps = 32/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ L V + L+ A Y ++ + + Y + A L +V G G+LSL Sbjct: 49 LIVVFGLGVPFCTLVVPETSALHLSAYAMTITGKFMCYAIAALALDLVWGYCGILSLGHA 108 Query: 72 IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113 + +A+G Y+ + G +++ L Sbjct: 109 LFFALGGYAIGMYLMRSIGHEGKYGSDLPDFMVFLDWHQLPWYWQGTQHLGYALLLVVLV 168 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 + + +I Y + + R FP Sbjct: 169 PAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIGGFP 228 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + + + L+ + + + +RD + L + + KL Sbjct: 229 ITHPGTRTALLLITFAVLILAFLGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 288 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 289 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIIGAFAVNG 348 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F +F + + LV L + ++ L Sbjct: 349 AKSF--------------FTANFPEYWLFFLGLIFVLVPLFLPNGIMGL 383 >gi|330953091|gb|EGH53351.1| inner-membrane translocator [Pseudomonas syringae Cit 7] Length = 359 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 96/324 (29%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 GFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDHFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRAALFLATVALLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 +V L ++ + Sbjct: 329 YWLFFFGALFIIVTLYLPKGVIGM 352 >gi|312793572|ref|YP_004026495.1| inner-membrane translocator [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180712|gb|ADQ40882.1| inner-membrane translocator [Caldicellulosiruptor kristjanssonii 177R1B] Length = 312 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 72/338 (21%), Positives = 135/338 (39%), Gaps = 42/338 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K + + +V L++ L + YI I++ ++ A L+++ G G S Sbjct: 1 MKKRLLVYSVFVIVLYLIITLLMKMGIIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60 Query: 68 LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L AIGAY+ + + +L + + + + CG+I+GLP L+ RGDYLAIAT Sbjct: 61 LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGLIIGLPVLRLRGDYLAIAT 120 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ + G +GI + Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + LS +IL + ++ A IR+++ A ++ K+ AF + + F G+AG Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + ++ S I PDMF F ++I ++ IV+ + ++ Sbjct: 215 SVYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + L + L +++L R L+ + Sbjct: 260 TIISALLQDYPAVRMVLYALILIIIMLFRPQGLMGTKE 297 >gi|197301483|ref|ZP_03166562.1| hypothetical protein RUMLAC_00215 [Ruminococcus lactaris ATCC 29176] gi|197299443|gb|EDY33964.1| hypothetical protein RUMLAC_00215 [Ruminococcus lactaris ATCC 29176] Length = 294 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 105/306 (34%), Gaps = 24/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IGAY ++ ++ G+ + + Sbjct: 5 SYLVNGLSLGSVYALIALGYTMVYGIAKMLNFAHGDVIMIGAYVALVSMNQAGMPVPAAV 64 Query: 97 PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +S ++ G++M + R ++A LI + +L + G Sbjct: 65 LISIVVCTVLGVVMERIAYKPLRNASSSLAVLITAIGVSYLLQNVALLIFGANAKTFPSV 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + G +V + ++ + ++ ++++T A R + + Sbjct: 125 IKWKGISVAG---------GELKISGETIVTIVVCVVIMVVLMAFVQKTKPGQAMRAVSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + FA+ S +AG ++ ++P I + Sbjct: 176 DRGAAQLMGINVNGTIALTFAIGSGLAAVAGVLLCSTYPSLTPYT-GAMPGIKAFVAAVF 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ +L + ++ L +V+L++ Sbjct: 235 GGIGSIPGAFIGGILLGLIEIFSKAYISSQMADA-------------IVFAVLIVVLLVK 281 Query: 336 SHSLLR 341 LL Sbjct: 282 PTGLLG 287 >gi|325519801|gb|EGC99096.1| branched-chain amino acid ABC-type transport system permease component [Burkholderia sp. TJI49] Length = 360 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 105/305 (34%), Gaps = 25/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I IY + A GL+++ G L++ Y +GA+ + +R+GL + + Sbjct: 6 DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAF 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + GA G+ + L+ IA L+ + IL + + G V L Sbjct: 66 AAVVVGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + +A + +LR T + A R + Sbjct: 126 PDWH-----------LRLGGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA++ A G++G + I P M F + + +++G Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + +L V + + L F L + ++ R Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280 Query: 337 HSLLR 341 + L Sbjct: 281 NGLFS 285 >gi|296536412|ref|ZP_06898512.1| urea ABC superfamily ATP binding cassette transporter, permease protein [Roseomonas cervicalis ATCC 49957] gi|296263262|gb|EFH09787.1| urea ABC superfamily ATP binding cassette transporter, permease protein [Roseomonas cervicalis ATCC 49957] Length = 366 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 88/335 (26%), Gaps = 33/335 (9%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 A + S+ + + Y + A + + G G+LSL +A+G Y+ + Sbjct: 39 LPPDAALYVSDFTVSVSGKWICYAILALAIDLAWGYAGILSLGHGAFFALGGYAIGMHLM 98 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM----------------- 129 R + LP + A + Sbjct: 99 RLIGPRGVYGHPVLPDFMVFLGWTELPWYWWGFSSFPFAFTMALVVPGLLAGLVGYLAFR 158 Query: 130 --SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +I + D + + ++Y Sbjct: 159 SRITGVYLSIITQAMTYALMLAFFRNDMGFGGNNGFTDFKELLGLRLNTAEARAALFYAA 218 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + + + R+ + +RD + L + KLS F +S+ G+AGA Sbjct: 219 LLALAGALLLCRHVTRSKLGRVLVAVRDAESRVRFLGYDTVRVKLSVFVLSAMLAGLAGA 278 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + I+P F +I + V +GG +L + + Sbjct: 279 LYTPLVGIINPGEFSPGNSIEAVVWVAVGGRGTLVGALVGAFSVNAIKTWLTSFA----- 333 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ V L L+ L Sbjct: 334 ---------PDLWLFVLGGLFVAVTLFLPRGLVGL 359 >gi|139437972|ref|ZP_01771525.1| Hypothetical protein COLAER_00512 [Collinsella aerofaciens ATCC 25986] gi|133776169|gb|EBA39989.1| Hypothetical protein COLAER_00512 [Collinsella aerofaciens ATCC 25986] Length = 296 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 24/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ + +Y + A G ++V G +L+ +GAY S GL W + Sbjct: 9 QYLVNGLSMGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVSFCATSYLGLPGWASV 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +S ++ G+++ + K +A LI + L + G + Sbjct: 69 VLSCVVCTVLGVLIEGLAYKPLRQAGPLAVLITAIGVSYFLQNAAQLLWGATPKNFTSLV 128 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F + ++ + A ++ + +T + A R + ++ Sbjct: 129 TFPVPEF----------LAKFNVSAVSLVTIVACLVIMAGLMFFTGKTKMGKAMRAVSED 178 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +AG + + P I + G Sbjct: 179 KAAAQLMGINVNRTISMTFAIGSALAAIAGVLLCSYSPVLQPTT-GAMPGIKAFDAAVFG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ ++ + + + + F L +V+L++ Sbjct: 238 GIGSIPGAFVGGILIGIIEAMAQAYISTSLANSIVFG-------------VLIIVLLVKP 284 Query: 337 HSLLR 341 LL Sbjct: 285 AGLLG 289 >gi|71907068|ref|YP_284655.1| inner-membrane translocator [Dechloromonas aromatica RCB] gi|71846689|gb|AAZ46185.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Dechloromonas aromatica RCB] Length = 371 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 109/350 (31%), Gaps = 32/350 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + L L+ + L F A Y ++ +I+ Y + A + ++ G G+LSL Sbjct: 23 FFLALALVVIPVLHLNFPEDSALHVSTYAITLIGKIMCYALVAVAMDLIWGYGGILSLGH 82 Query: 71 VIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSL 115 + +A+G Y++ + W +P + S + G + L Sbjct: 83 GLFFALGGYAFGMYLMRQIGRDGSYGADLPDFMVFLDWKELPWFWVGSDSFGWVAFLVMA 142 Query: 116 KFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 +I + + + R + Sbjct: 143 VPAVVAFVFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRVLGY 202 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + + ++ + M ++ WL ++ IRD + + ++ KL Sbjct: 203 SVTSSETRLVLFGLTAVMLAVTLVFAAWLVKSKFGRVLTAIRDAESRVMFIGYNPLWYKL 262 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 + + +S+ G+AGA + I+P +I + V +GG +L ++ Sbjct: 263 TIWVISAVLCGIAGALYVPQVGIINPSEMSPGNSIEIAIWVAVGGRGTLIGPIIGAFVVN 322 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F SF + + +V LM L+ L Sbjct: 323 LAKSW--------------FTVSFPEYWLFFLGLLFIVVTLMLPQGLVGL 358 >gi|264677025|ref|YP_003276931.1| High-affinity branched-chain amino acidtransporter permease livH [Comamonas testosteroni CNB-2] gi|299532555|ref|ZP_07045945.1| High-affinity branched-chain amino acidtransport system permease protein livH [Comamonas testosteroni S44] gi|262207537|gb|ACY31635.1| High-affinity branched-chain amino acidtransport system permease protein livH [Comamonas testosteroni CNB-2] gi|298719502|gb|EFI60469.1| High-affinity branched-chain amino acidtransport system permease protein livH [Comamonas testosteroni S44] Length = 309 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 102/305 (33%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + ++ L Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMVGALTSWSCIGLMQEAMPYLPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ A + SL F + +A L S ++ + + + + Sbjct: 68 LMLLIAAIIACVVAASLNFVIEKVAYRPLRNSPRLAPLITAIGVSILLQTLAMIIWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ + + VL+ A+++ + T + A R +N + Sbjct: 128 --KAYPTLLSSTPYEIGTAVITPTQILVLVVTAIALATLMYLVNYTRLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ M F + + + GG+ Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAHHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G +L + I L +++ +R Sbjct: 245 GNLAGAVVGGLLLGLIESIGSGYIGDLTGGVLG-----SQYTDIFAFIVLIIILTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|116750524|ref|YP_847211.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116699588|gb|ABK18776.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 340 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 131/356 (36%), Gaps = 47/356 (13%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + L V+ +LL YI + + I I ++ + L++V G +G S+ Sbjct: 2 RSLSILAYVLLGILLVAGAMGNWVNSYIQLVIMYIGINIILSSSLNLVNGYMGEFSVGHA 61 Query: 72 IAYAIGAYSYVILGSRYGLS-----------------IWLLIPVSAMISGACGMIMGLPS 114 A+GAY +L + + + + + + G+++ +PS Sbjct: 62 GFMAVGAYITSVLNVWFFTDSTIFGPSLFPPVSAVVLFPVTLLIGGIGAALAGLLVAIPS 121 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + RGDYLAI TL ++ I ++ + + I + + + + + Sbjct: 122 FRTRGDYLAIITLAVNYIVKSSIENLQVIGGARGFMGMGGVVNAMK-------------- 167 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + ++ +L L+ ++ + IRD++ A ++ K+ A Sbjct: 168 -SAVPVPWVLIWVLIATGLTIWVLYRFVNSTYGKGIVAIRDDEIAAEIMSVDTRRMKMVA 226 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F +SS G+AG FA I+P F ++ V+ +V LGGM SLS + IL Sbjct: 227 FMLSSGLAGIAGGLFAHVLGYINPGTFTIMKSTEVLVMVYLGGMGSLSGSVLSAVILTVG 286 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 +EL + + + + R L R ++ Sbjct: 287 LELFRSFQVWKWVVVPLLLILLML---------------FRPEGLFGHRELTDVFP 327 >gi|163854601|ref|YP_001628899.1| branched chain amino acid ABC transporter permease [Bordetella petrii DSM 12804] gi|163258329|emb|CAP40628.1| Branched-chain amino acid transport system, permease component [Bordetella petrii] Length = 541 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 83/291 (28%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY + + + L + + + ++ Sbjct: 268 ITFGLMGVINMAHGELLMIGAYVTYAVQALFRLWFPQWLDAYVIAALPAAFVVTALVGMA 327 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + S + + Sbjct: 328 LER--TVIRWLYGRPLETLLATWGISLMLMQAVRTLFGAQNVEVGNPSWMSGGITVLGNL 385 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + + L L T + R I N++ + + AF + Sbjct: 386 VLSYNRIAIVAFAVLVVVFVWLLLNHTRLGLFVRAITQNRRMADCVGVPTGRIDMLAFGL 445 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG + + + + +V+LGG+ L+ A L V + Sbjct: 446 GSGIAGLAGVALSQLGNV--GPDLGRAYIVDSFMVVVLGGVGQLAGTVVAALGLGAVTKF 503 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + ++ + L + R L R S Sbjct: 504 LEPYSGAVMAK-------------ITILALIVLFVQKRPQGLFAPRGRSAE 541 >gi|17548057|ref|NP_521459.1| transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17430363|emb|CAD17128.1| probable transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 328 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 130/325 (40%), Gaps = 16/325 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++Y LLL + A + Y + ++L + +FA ++++G GLLS + Sbjct: 9 FILYGLLLAALIVAPLAGAYPVFVA-KLLCFALFASAFNLLLGYTGLLSFGHAAFFGGAG 67 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y L L+ L + G+++GL +++ +G Y A+ TL ++++F + Sbjct: 68 YVAGYLMRDLNLTPELGLIAGTAAGALIGLVVGLLAIRRQGIYFAMITLALAQMFYFFCL 127 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + T G+ G+ R + ++ +YY +L + ++ +I Sbjct: 128 QAP-FTGGEDGLQGVPR-------------GKLLGMLDLSSDLTLYYFVLAVVVVAFLLI 173 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + + I++N+ SL KL AF +S+A G+AGA + Sbjct: 174 VRTIHSPFGQILKAIKENEPRAISLGYDTDRFKLLAFVLSAALSGLAGALKTLVLGFETL 233 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FN 317 ++ + VI + ++GG+ LS A++I + + + + + Sbjct: 234 TDVHWAMSGSVILMTLVGGLGILSGPILGAALVIALENKLGDLGAFLAGATGMDGFNVLG 293 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 TT+ + +L ++ Sbjct: 294 ESVTTVTGAIFVICVLTFRRGIMGE 318 >gi|153950095|ref|YP_001401756.1| hydrophobic amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|152961590|gb|ABS49051.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pseudotuberculosis IP 31758] Length = 358 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 101/344 (29%), Gaps = 27/344 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L V+ L L Y ++ +IL Y + A L +V G GLLSL + + Sbjct: 25 LIALIVLPFLALLPADHPLAISTYTLTLIGKILCYAVVAIALDLVWGYAGLLSLGHGLFF 84 Query: 75 AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 A+G Y+ + W +P S + L L Sbjct: 85 ALGGYAMGMYLMRQAAGDGLPAFMSFLSWSELPWFWSGSQYFVWALCLIVLVPGLLAFLF 144 Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + ++ G + + + FP S I Sbjct: 145 GYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGFPVSATSTRI 204 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 ++ L + S ++ L L RT +RD + KL + +S+ Sbjct: 205 ALFLATLALLIASLALGLALARTKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVL 264 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 +AGA + I+P + +I V LGG +L I+ G Sbjct: 265 CALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVNGAKSW---- 320 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + + LV L ++ L Sbjct: 321 ----------FTMAMPEYWQFFLGLIFILVTLFLPKGVIGLLRR 354 >gi|134299577|ref|YP_001113073.1| inner-membrane translocator [Desulfotomaculum reducens MI-1] gi|134052277|gb|ABO50248.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Desulfotomaculum reducens MI-1] Length = 290 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 94/304 (30%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G + L++ Y +GA+ V++ + + + + Sbjct: 6 LLNGITLGATYALIALGYTMVYGIIQLINFAHGEIYMVGAFVGVLMVTVFQQGLAASLVA 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+ + + + +A LI + L G Sbjct: 66 AMLTCMVIGVSIERIAYRPLRRSTRLAPLISAIGVSIFLQTLMTKLKGPQ---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I + + + +L+ L A + ++ I A R ++ Sbjct: 116 -PVGFPHVIEDAIYKFASIEISKVQIIILVLSSLLMAGLHFIVKYVKIGKAMRAASEDYD 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ SA G + +SP M + + +LGG+ Sbjct: 175 TAALMGINVNRVISFTFAIGSALAAAGGVLVGIYFNSVSPLM-GVTVGLKAFCAAVLGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ L L F++ + L +V+L R Sbjct: 234 GSIPGAMLGGLFLGVAETL-------------GVAGGFDLYKDAIAFTLLIVVLLFRPTG 280 Query: 339 LLRL 342 LL Sbjct: 281 LLGR 284 >gi|319795283|ref|YP_004156923.1| urea ABC transporter permease urtc [Variovorax paradoxus EPS] gi|315597746|gb|ADU38812.1| urea ABC transporter, permease protein UrtC [Variovorax paradoxus EPS] Length = 411 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 97/355 (27%), Gaps = 37/355 (10%) Query: 11 YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + L VV + L + Y ++ +I+ Y + A + ++ G G+ Sbjct: 20 WTAFFVALIVVCAVAPVLNIWVPADSPLHMSDYAVALVGKIMCYAICALAMDLIWGYTGI 79 Query: 66 LSLNCVIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIM 110 LSL + +A+G Y + W +P S + + Sbjct: 80 LSLGHGLFFALGGYMMGMYLMRQIGRDGNYKSDLPDFMVFLDWKTLPWHWTFSDSFIATL 139 Query: 111 GLPSLKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 L +I + + + Sbjct: 140 ILIVAVPGLIAFVFGFFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFK 199 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 R P + + ++ + WL + + IRD + Sbjct: 200 RILNIPIATQEMRMTLFALTGLTLLGFFLFAKWLIGSKFGRVLQAIRDAETRVMFSGYNP 259 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + KL+ + +S+ G+AGA + I+P + +I + +GG SL Sbjct: 260 LPYKLTIWVISAVMCGVAGALYVPQVGIINPGEMSAANSIEIAIWAAVGGRASLIGPIIG 319 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 I+ G ++ + V L + ++ L Sbjct: 320 AFIVNGAKSWLT--------------VAYPEYWLYFLGALFIAVTLFLPNGIVGL 360 >gi|62870128|gb|AAY18215.1| HmgE [Pseudomonas putida] Length = 312 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 99/307 (32%), Gaps = 9/307 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + IY + A G ++V G +GL++ IGA + + + + + + Sbjct: 12 VLNGLVLGSIYALVALGYTMVYGIIGLINFAHGEVVMIGAMVTISVLTMLAGAGFAPGII 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ ++ + + Y + IL I + + R Sbjct: 72 TLLLAIMAAAVVCMLLAQGMEKYAYRPLRKAPRLTPLILAIGISIALQNLAMMIWGR--- 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T ++ ++L + + L + +T + A R NQ+ Sbjct: 129 GYKTFPEVVETRPVDVFGATVTNVQLSIMLVAVVIMLGLWLLVDKTRLGKAMRATAQNQE 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I + F + ++ +AG A + + M + S +LGG+ Sbjct: 189 VAGLMGININRVISATFLIGASLGAIAGVMRAINYGQADAYM-GLLLGLKAFSAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G L L LV+L R + Sbjct: 248 GNLFGAMAGGLLLGLIESLAAGYTGQLTGGFLG-----ANYQDIFAFAVLILVLLFRPNG 302 Query: 339 LLRLRTP 345 LL R Sbjct: 303 LLGERQA 309 >gi|206562128|ref|YP_002232891.1| putative branched-chain amino acid transporter [Burkholderia cenocepacia J2315] gi|198038168|emb|CAR54119.1| putative branched-chain amino acid transporter [Burkholderia cenocepacia J2315] Length = 357 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 104/296 (35%), Gaps = 12/296 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + +++ + Y ++ L+ + A ++ G G+L+L + IG Sbjct: 26 VMTGFAIVVAGAILPLVVGAYELTVIRDALVLAILALSYDLLWGRAGVLTLGHTTFFGIG 85 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMI--MGLPSLKFRGDYLAIATLIMSEIFQN 135 AY + + ++G + + + + L R + AI ++ + I Q Sbjct: 86 AYGFAVTTVQFGQTPLVGFLAGLACAAVAAAVLGYFLLYAGVRLHFFAILSMAVLIIAQQ 145 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + W+ +T G G+ L F + + +Y + + Sbjct: 146 LATSWQSVTGGDTGLLGIPGLSFQLAGHT----------LDLSGPVASWYAVATILVALL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ L R+ I N+ + + L F S+ +AG AA+ Sbjct: 196 GVVWLLCRSRYGKVLAAISTNEWRALACGYHTSWHLLLMFTASAVLAAVAGCLMAATAGV 255 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ++PD+F VI V +GG SL A L + ++ ++ +L Sbjct: 256 VAPDVFSPVLATEVILWVAIGGRGSLGGPVLAAVGLTLLKHGASSLSTQWWPLILG 311 >gi|126731556|ref|ZP_01747362.1| ABC transporter permease protein [Sagittula stellata E-37] gi|126708092|gb|EBA07152.1| ABC transporter permease protein [Sagittula stellata E-37] Length = 327 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 112/314 (35%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +AV+ L+ + + ++ + +I + A GL+I +G GL+SL + + Sbjct: 6 WLNIAVLLALVAVPGWALVADEPFTITLATRAVILALAAAGLNIALGVGGLVSLGHAVFF 65 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +G Y+ IL + ++ ++ L +L G L+ Sbjct: 66 GLGGYAMGILAFHAQSYAPMEFFGVSVPGTKAMPVIWLVALVVSGLAAFFIGLLALRTSG 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + G S+ FP + I Y + L + Sbjct: 126 VYFIMITLAFGQMFYFFSISWAAYGGEDGVSIYVRNGFPGLNTLVPIQFYGLCLVVLLAV 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ L R+ A R + ++ + +L+AF +S A G+AGA FA Sbjct: 186 LALTAALMRSPFGLALNAARQAPERVRAVGLDPVRLRLAAFTLSGAVTGLAGALFADLNR 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP MF + + I +ILGG L AI + + ++ Y+ Sbjct: 246 FVSPSMFSWQLSGEFIVFIILGGTARLFGPVIGAAIFVLMEHWLGQLSEYWHIWFGLLLL 305 Query: 315 SFNMRHTTLMVIAL 328 + + ++ L Sbjct: 306 AVTLWGQGGVIGLL 319 >gi|296101745|ref|YP_003611891.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056204|gb|ADF60942.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 304 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 88/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLALLSFFGLQSFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGWTIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQLSQGPRQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + FV ++L+ + + T + R ++ ++K Sbjct: 129 GVPTMLDGVIRLHLGEGFVQITYTKVFILVASFAGMLLLTWIISHTRLGRMCRAVQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A G+AG + + F I + +LGG+ Sbjct: 189 MASILGINTDRVISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFVIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL GM + + F L ++++ R Sbjct: 248 GSLPGAMLGGLILGVAEAQFSGMVNSDYKDVFSFG-------------LLVMILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|91782150|ref|YP_557356.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|296162011|ref|ZP_06844810.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. Ch1-1] gi|91686104|gb|ABE29304.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] gi|295887755|gb|EFG67574.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. Ch1-1] Length = 393 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 102/349 (29%), Gaps = 32/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I+ L V + L+ A Y ++ + + Y + A L +V G G+LSL Sbjct: 48 LIIVFGLGVPFATLVVPETSALHLSAYAMTITGKFMCYAIAALALDLVWGYCGILSLGHA 107 Query: 72 IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113 + +A+G Y+ + G +++ L Sbjct: 108 LFFALGGYAIGMYLMRAIGHEGKYGSDLPDFMVFLDWHQLPWYWQGTQHLGYALLLVVLV 167 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 + + +I Y + + R FP Sbjct: 168 PAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIGGFP 227 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + + + L+ + + + +RD + L + + KL Sbjct: 228 ITHPGTRTALLLITFAVLILAFLGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 287 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 288 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIIGAFAVNG 347 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F +F + + LV L + ++ L Sbjct: 348 AKSF--------------FTANFPEYWLFFLGLIFVLVPLFLPNGIMGL 382 >gi|148255158|ref|YP_001239743.1| hypothetical protein BBta_3759 [Bradyrhizobium sp. BTAi1] gi|146407331|gb|ABQ35837.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 322 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 108/301 (35%), Gaps = 22/301 (7%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + + ++A + ++ F L +Q L + + A ++++G G Sbjct: 13 PRAMRDEMIVFVIMAALLAIVPFTGLYPFF--------VMQALCFALLACAFNLLIGYGG 64 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 LLS + Y +GL L I + ++ G S++ +G Y ++ Sbjct: 65 LLSFGHAMFLGTAGYCSAHALKVWGLPPELGILTGIAGAFVLSVVTGYISIRRQGIYFSM 124 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL +S++ + ++ ++ + + F + +Y Sbjct: 125 ITLALSQLLYFVYLQ--------------TPFTHGEDGIQGIPQGRLFGFIDLSKPTTLY 170 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 YV+L +I + + IR+N++ SL KL A+ +S G Sbjct: 171 YVVLVGFLAGFLLIFRTINSPFGEVLKAIRENEQRAISLGYKTDQYKLLAYILSGTIAGF 230 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA S +S + ++ + ++GG+ ++ ++I + + G + Sbjct: 231 AGALKVFVAQNASLTDVHWSMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGFGQW 290 Query: 305 Y 305 Sbjct: 291 V 291 >gi|312622383|ref|YP_004023996.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis 2002] gi|312202850|gb|ADQ46177.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis 2002] Length = 312 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 73/338 (21%), Positives = 135/338 (39%), Gaps = 42/338 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K + + +V L++ L + YI I++ ++ A L+++ G G S Sbjct: 1 MKKRLLVYSVFIIVLYLIIMLLIKIGIIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60 Query: 68 LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L AIGAY+ + + +L + + + + CG+I+GLP L+ RGDYLAIAT Sbjct: 61 LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGLIIGLPVLRLRGDYLAIAT 120 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ + G +GI + Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + LS +IL + ++ A IR+++ A ++ K+ AF + + F G+AG Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + ++ S I PDMF F ++I ++ IV+ + ++ Sbjct: 215 SIYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + L I L +++L R L+ + Sbjct: 260 TIISALLQDYPAVRMVLYSIILIIIMLFRPQGLMGTKE 297 >gi|326318178|ref|YP_004235850.1| urea ABC transporter permease UrtC [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375014|gb|ADX47283.1| urea ABC transporter, permease protein UrtC [Acidovorax avenae subsp. avenae ATCC 19860] Length = 385 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 100/349 (28%), Gaps = 33/349 (9%) Query: 13 KILCLLAVVYPL-LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ + AV L LL A Y ++ +I+ Y + A + ++ G G+LSL Sbjct: 27 ALIAVCAVAPALNLLVPAGSAFHLSDYAVALLGKIMCYAICALAMDLIWGYTGILSLGHG 86 Query: 72 IAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 + +A+G Y + W +P +S + + L Sbjct: 87 LFFALGGYVMGMYLMRQIGRDGNYKSDLPDFMVFLDWKDLPWHWALSDSFVATLVLVVAV 146 Query: 117 FRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 +I + + + R P Sbjct: 147 PGLVAFVFGYFAFRSRIKGVYFSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGQP 206 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + ++ + + WL + + IRD + + + KL+ Sbjct: 207 IATQNMRMLLFVLTGLALLGFFLLGRWLVGSKFGRVLQAIRDAETRVMFSGYSPLPYKLA 266 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + +S+ G+AGA + I+P + +I + +GG +L+ I+ G Sbjct: 267 IWTISAMMCGVAGALYVPQVGIINPGEMSAANSIEIAVWAAVGGRATLAGPIAGAFIVNG 326 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + V L + L Sbjct: 327 AKSWLT--------------VTAPEFWLYFLGALFIAVTLFLPQGVAGL 361 >gi|239977855|ref|ZP_04700379.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces albus J1074] Length = 666 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 26/326 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A + L + L Y S+ L + A ++++ G GL +L +A+G Sbjct: 328 AAPLLVLCVALVALPGLLDAYTISLAGSALALGLLAVSVTVLTGYAGLPTLGQTAPFAVG 387 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ L + + I +SA+ + + G ++ RG + + TL + E+ + Sbjct: 388 AYTTANLAAAGWTVGPVQILLSALAAAVFSAVTGPAVIRARGTTVLMITLAVGELTSAAV 447 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + K +T G G+ L + + E +Y L + ++ + Sbjct: 448 NQLKSVTGGADGLVGFPATQAL------------WGGEDLFEESELYTYALVVAAVAVAA 495 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L + R+ R + + + L A+ + A G+ G+ + +S Sbjct: 496 TLLVLRSPAGKLLTGARGAEARMRASGHPVWRYLLVAYIGAGALAGVGGSVMVTVQQYLS 555 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + ++GG TS+ +++ + G + Sbjct: 556 PADVGFEIAAFALLAAVIGGTTSVVGALFGAGLIVATRDWVAGAWPGHGP---------- 605 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343 L+ + + + L LR Sbjct: 606 ----LLLGVLFVAAVYLLPRGLAGLR 627 >gi|241765514|ref|ZP_04763477.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241364698|gb|EER59717.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 321 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 115/322 (35%), Gaps = 28/322 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + L L Y ++ I+ + GL+++ G G +L A+GAY Sbjct: 10 WLLLVALGLAFPLFTGNDYHLTVMSTAYIFAIATIGLNLITGYTGQFNLAHSGFMAVGAY 69 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + IL + S W +S +S G +G+ SL+ +G Y +I TL + I ++ K Sbjct: 70 TVGILTVDHQFSFWAAFALSGAVSVVLGYFLGILSLRLKGHYFSIFTLCVGYIMFLVIEK 129 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T+G GI S + +YY++ L + Sbjct: 130 WDGLTHGTVGIMGIPAPEP-------------IGSLRFDTPLALYYLVFFWLVLGMWAMR 176 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + + + IR++ + +L ++ K AF +S + GMAG +A I P Sbjct: 177 RIVNSLLGRTFVAIRNSDELAEALGINLMRNKTLAFMLSVFYAGMAGGLYAGFVRFIGPG 236 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + +I+ L + L ++ Sbjct: 237 VAGVEHTFDMTMYMIV---------------GGLGTLLGPLLGALAVPWLTQYLQFLQEY 281 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 + L L+++ H ++ Sbjct: 282 RFIVFGPILVLLVIFVPHGIVG 303 >gi|86748864|ref|YP_485360.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86571892|gb|ABD06449.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 336 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 124/308 (40%), Gaps = 26/308 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 ++ ++ +LIY + L+I+ G G SL YA+GAY+ IL +G+ Sbjct: 38 APLIAKNFVIFQMTMVLIYAIAVLALNILTGGSGQFSLGQSAFYALGAYTSAILMEVFGV 97 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + L +PV+ I G + GLP+L+ G YLA+AT ++ +L Sbjct: 98 NYALTLPVAGGICFIAGYLFGLPALRLSGIYLALATFALATAMPQLL------------K 145 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + G + + + ++++YY +L + + L ++ A Sbjct: 146 LHYFEAWTGGVQGLVITKPDAPFGLPLSQDMWLYYFVLVVSMAIYVASVNLLKSRSGRAM 205 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 IRDN+ A ++ + K AF VS+ G+AG A + ++PD + I + Sbjct: 206 MAIRDNEIAASAMGVDVALYKTLAFGVSAGITGVAGGLGAIAVQFVAPDSYTIQLAIALF 265 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +++GG+ L A ++ V + + + + + L L Sbjct: 266 LGMVVGGVGWLPGSIVGAAFIVFVPNIAEHFSKGLSGA--------------VFGLILVL 311 Query: 331 VILMRSHS 338 +I + H Sbjct: 312 IIFVLPHG 319 >gi|327192980|gb|EGE59895.1| putative branched-chain amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 333 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 122/344 (35%), Gaps = 28/344 (8%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 ++ I C LA + ++ +G + ++ +++ + L +V G G+ +L Sbjct: 14 HRRGFISCDLAGITIIIAVAAVGYFAFPDNL-ALLTRMITIALLVLSLDLVTGYCGVATL 72 Query: 69 NCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + GAY+ IL + Y L++ A G++ G L+ G + ++ Sbjct: 73 GHAALFGSGAYAAGILSAHYGVNDPLLMLLAGIAGGAASGLLSGAIILRAHGLPQLVLSI 132 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + +F K T G G+ G F +Y ++ Sbjct: 133 ALIHLFHEFANKASSWTGGSDGLSGIAPDPIFGL------------FEFDLYGQTAFFFG 180 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + +++ L R+ R IR + ++ + A + + +S A G+ GA Sbjct: 181 TALLLVVFALLRLLVRSPFGMLCRGIRQDPLRIRAMGGSPKAALIRMYVMSGAVAGVGGA 240 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A S + D F+++ + +++LGG SL T I + + N +++ Sbjct: 241 LNAISTQVVGLDSLSFTQSAEALVMLVLGGTGSLFGALSGTIIFMLFEDYVSAANPFHW- 299 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T++ L V+L L R Sbjct: 300 -------------LTMVGALLIAVVLFAPKGLYGTAAALIVRRR 330 >gi|296536413|ref|ZP_06898513.1| urea ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296263263|gb|EFH09788.1| urea ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 518 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 86/291 (29%), Gaps = 18/291 (6%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + G +G++++ +GAY+ V++ L + A ++ + Sbjct: 245 VTFGVMGVINMAHGEMVMLGAYTTVVVQEALRGIPALAPLSLPLSVPAAFLVTAAIGVAL 304 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L+ + + + + + ++ + Sbjct: 305 ERG---LIRHLYGRPLETLLMTFGVGMILQQSVRLIFGAQNREVVSPAWMQGTLILPFGI 361 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +++ + + +R T R + N++ ++ FA Sbjct: 362 EVTQNRLWIIFFSLVVLGLTVAAIRFTRFGLEMRAVVQNRRIAATMGIRTGRVDAMTFAF 421 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S GMAG A S+ I +V+ GG+ SL+ L V ++ Sbjct: 422 GSGIAGMAGV--ALSQIDNVSPNLGTGYIIDSFMVVVFGGVGSLAGTMIGAFTLGIVNKM 479 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R L L+ + Sbjct: 480 LEPWAGAVLAK-------------IAVLVGIMLFIQRRPKGLFALKGRAAE 517 >gi|121595666|ref|YP_987562.1| inner-membrane translocator [Acidovorax sp. JS42] gi|222111883|ref|YP_002554147.1| inner-membrane translocator [Acidovorax ebreus TPSY] gi|120607746|gb|ABM43486.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Acidovorax sp. JS42] gi|221731327|gb|ACM34147.1| inner-membrane translocator [Acidovorax ebreus TPSY] Length = 309 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 98/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + ++ Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMVGALTSWSCIGLMQEAMPGAPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + L F + +A L S ++ + + + + Sbjct: 68 LILLLATLIACVVAAVLNFTIEKVAYRPLRNSPRLAPLITAIGMSILLQTLAMIIWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ F + +L AS++ + T + A R +N + Sbjct: 128 --KPYPTLLPTQPFQVGGAVITTTQVLILGVTVVALASMVYLVNYTRLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ M F + + + GG+ Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMWASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G +L + I L +++ +R Sbjct: 245 GNLAGAVVGGLLLGLIEAIGSGYIGTLTGGVLG-----SHYTDIFAFIVLIIILTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|16119763|ref|NP_396469.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15162357|gb|AAK90910.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 379 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 99/354 (27%), Gaps = 42/354 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A + +F ++ + + L+Y M +++ G G+L+L + + +G Sbjct: 9 IAAYVLFIAIIFAAPVFGDEFWLNRISKYLVYGMLGVAIALTWGYAGILNLGQGLFFGLG 68 Query: 78 AYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 AY + +W P + L Sbjct: 69 AYMLAMSLKLSSLTSLQQGSDKPVPDFMLWNAEPGAPTELCCINKGSFLWLPFQSQSVGL 128 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVA----------------DRLYFLGTTVRSLI 167 + +++ + L + + L Sbjct: 129 VLGVLLPVLIAGALGMLVFRKRISGVFVSIITLALVLLVRLVVVDAQPVTNGFNGLTDLG 188 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 F Y YY+ L+ + T + IRD+Q L + Sbjct: 189 WLMVGGIEFDPYSRATYYLCAACLSLTLIGARLVVETRAGMILQAIRDDQVRARYLGFDV 248 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 ++ F +S+ G+AG + + SP S ++ ++ +GG +SL Sbjct: 249 SLYQVFFFVISAGIAGVAGMLYVVVAEFASPTFMDLSFSVTMVVWAAVGGRSSLLGACIG 308 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + + + + ++ + LV+L L Sbjct: 309 AILINMIE------------AEVSETEALVEAWKAIIGLIFVLVVLFMPRGLGG 350 >gi|119386975|ref|YP_918030.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119377570|gb|ABL72334.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Paracoccus denitrificans PD1222] Length = 325 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 108/264 (40%), Gaps = 14/264 (5%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + +ILI+ M ++++G GLLS I + IG Y+ I +R+ + + +++ +A+ Sbjct: 32 LATEILIFAMVVAACNLLLGYTGLLSFGQGIFFGIGTYAAGICLTRWQIPVPVVLASAAV 91 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + A ++G S++ +G Y + TL S++F + + +T G G+ R Sbjct: 92 LGAATATLVGWLSIRRQGVYFVMLTLAFSQLFYFVAYTFSGVTGGDNGLLGVPRPS---- 147 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + + Y + +I++ + ++ IR+N+ Sbjct: 148 ----------VGGTALNAPWSYYTYVAVCFVAVFAILVMVTQSTFGRTLLAIRENEGRAA 197 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 ++ KL AFA+S A GA A ++ + +++ + I+GG +SL Sbjct: 198 AIGFPTKLFKLEAFAISGAVTAFGGALHAMLIGVAPLSNIEYHTSELILIMTIIGGSSSL 257 Query: 282 SKIAKATAILIGVVELCCGMNFYY 305 + + + + + Sbjct: 258 FGSVLGAGFYLLLADALSTVWPRW 281 >gi|282599983|ref|ZP_05972603.2| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Providencia rustigianii DSM 4541] gi|282567102|gb|EFB72637.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Providencia rustigianii DSM 4541] Length = 333 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 84/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIP 97 + Y + A G ++V G +G+++ Y IG+Y I + + + Sbjct: 37 FLNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIAIAGLMMLGIDVGWI 96 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + A A ++ I I + R Sbjct: 97 LIAAAFIAAIVVSSSYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQGSRDL 156 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ L++R + + A R ++ Sbjct: 157 ALPSLITGQWVLGESDGFEATISKMQLVIWIVTFLSMLALTLFIRYSRMGRACRACAEDL 216 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 217 KMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 275 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL + + ++ F L V+L+ Sbjct: 276 IGSIPGAMLGGLILGVSEAMTSAYLSTEYKDVVSFG-------------LLIGVLLIMPT 322 Query: 338 SLLRL 342 +L Sbjct: 323 GILGR 327 >gi|222529377|ref|YP_002573259.1| inner-membrane translocator [Caldicellulosiruptor bescii DSM 6725] gi|222456224|gb|ACM60486.1| inner-membrane translocator [Caldicellulosiruptor bescii DSM 6725] Length = 312 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 135/338 (39%), Gaps = 42/338 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K I + +V L++ L + YI I++ ++ A L+++ G G S Sbjct: 1 MKKRLLIYSVFIIVLYLIITLLMKIGIIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60 Query: 68 LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L AIGAY+ + + +L + + + + CG+I+GLP L+ RGDYLAIAT Sbjct: 61 LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGLIIGLPVLRLRGDYLAIAT 120 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ + G +GI + Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + LS +IL + ++ A IR+++ A ++ K+ AF + + F G+AG Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + ++ S I PDMF F ++I ++ IV+ + ++ Sbjct: 215 SIYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + L I L +++L R L+ + Sbjct: 260 TIISALLQDYPAVRMVLYSIILIIIMLFRPQGLMGTKE 297 >gi|254442160|ref|ZP_05055636.1| amino acid or sugar ABC transport system, permease protein [Verrucomicrobiae bacterium DG1235] gi|198256468|gb|EDY80776.1| amino acid or sugar ABC transport system, permease protein [Verrucomicrobiae bacterium DG1235] Length = 541 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 105/316 (33%), Gaps = 37/316 (11%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-----------YGLS 91 + +M ++GL+I G +G++++ AIG Y+ ++ + Sbjct: 250 LSTGSVLLMVSFGLAITFGLMGIINMAHGEFIAIGGYTCYVVQGYFSNWFGESSPAFQWF 309 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 W+ +PVS ++G G ++ +F + L+ + ++ + + G A + Sbjct: 310 FWVSLPVSFAVAGGIGFVLEKGFFRFLYKRPLES-LLATWGLSMVMRQAFRLKFGAANVQ 368 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 VA+ + F + + + + F+ L L +T + R Sbjct: 369 VANP----------DLLLGNFEYAGISMSYARLFAIAFAGFVCVLTWLLLTKTNLGLYIR 418 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 + N+ SL + FA MAGA + + + Sbjct: 419 AVMQNRNMASSLGIPVKRVNSMTFAFGCGLAAMAGAVLTQIGNV--GPTMGQAYIVDSFM 476 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V++GG+ +L + + + + +++ + L Sbjct: 477 VVVVGGVGNLLGAGISAMGIGVFDQFLQPLFGPVMGK-------------IIVLGMIILF 523 Query: 332 ILMRSHSLLRLRTPSN 347 + + + ++ S Sbjct: 524 LQWKPGGIFPTKSRSM 539 >gi|330807292|ref|YP_004351754.1| amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375400|gb|AEA66750.1| Putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 359 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 PLHVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDSFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F + +++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFGITEPGTRAVLFFATVLLLVASLFIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLARSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIVVTLYLPKGVIGL 352 >gi|269123242|ref|YP_003305819.1| inner-membrane translocator [Streptobacillus moniliformis DSM 12112] gi|268314568|gb|ACZ00942.1| inner-membrane translocator [Streptobacillus moniliformis DSM 12112] Length = 331 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 81/351 (23%), Positives = 150/351 (42%), Gaps = 49/351 (13%) Query: 5 SLRLNKYDKILCLLAVVY-PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 SL+LNK + IL L +++ L+L + Y S+ I ILIY++FA ++I G + Sbjct: 6 SLKLNKTNYILGFLMILFTYLILQYSIIDDGIFSYKASIYINILIYILFALSINITTGVM 65 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLK 116 G L+L +IGAYS I + ++ A+I+ GM++ + +L+ Sbjct: 66 GELNLGHAGFISIGAYSSSIFSKYLYSFNLNHLLHLVIVCIFGAIIASFFGMLVSMTTLR 125 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 RGDYLAI TL EI + I+ + Sbjct: 126 LRGDYLAIITLAFGEIVKYIIQNIDFLGGAA-----------------------GLNGIP 162 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 I ++++ + + +IL ++ +IR+N+ A ++ I AK+ F Sbjct: 163 DIVNFSYIFLIVVISSILMIMILISKK---GRLLLSIRENEIAAENMGVNINRAKIYGFT 219 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S+ F G+ GA FA + ++PD F F +I ++ +V+LGG+ S++ + L + E Sbjct: 220 LSAFFAGIGGALFAHNLGSLTPDKFNFVFSIEILVMVVLGGLGSITGAVVSATFLTLLNE 279 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + ++ Y + I L +++ + +L + Sbjct: 280 ILRQVSEY---------------RFLIYSIILISLMIFKKDGILGTNEFTI 315 >gi|254500777|ref|ZP_05112928.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222436848|gb|EEE43527.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 360 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 117/329 (35%), Gaps = 19/329 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L V +++ + + + IL ++ A G +++ G GL+S+ Sbjct: 18 LFLGVAVVVVIVAAFAPFYASRSLIQDLFFILTMLVLAQGWNLLAGYAGLVSVGQQAFVG 77 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ GL + I + + + + + + +G Y AI T +++EI + Sbjct: 78 IGAYAMFSGVILLGLDPVVSILLGGIAAALLAIPAAFFTFRLQGAYFAIGTWVVAEIVRL 137 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ +WK + G R ++ + ++ Y++ L + + Sbjct: 138 LVAQWKMLGGGTG--TSLPRSASREMFGIEFLKDTFGFKTSAAADVVTYWLSLVLAVATI 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ WL R+ +RDNQ S+ K + ++ G+ GA + R Sbjct: 196 GVVYWLLRSRQGLGLAAVRDNQNTARSIGVDAQRIKAIVYLSTAFITGLVGALIYVQKAR 255 Query: 256 ISPDMFK--FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ISPD VI IV++GG+ ++ + + G +Y L Sbjct: 256 ISPDAAFSVLDWTAYVIFIVVIGGIGTIEGPIIGVLVFFALQNTLSGYGSWYLLVLGLLG 315 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +L L L Sbjct: 316 IVI---------------MLFAPRGLWGL 329 >gi|160914596|ref|ZP_02076810.1| hypothetical protein EUBDOL_00603 [Eubacterium dolichum DSM 3991] gi|158433136|gb|EDP11425.1| hypothetical protein EUBDOL_00603 [Eubacterium dolichum DSM 3991] Length = 297 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 94/289 (32%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GAY + S++ L+ +L + V Sbjct: 13 LINGLSIGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAYVGFLAISQFHLNFFLALLV 72 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G+++ + K + IA LI + L G Sbjct: 73 AMAFCAVLGVVIERIAYKPLRNATRIAALITAIGVSYFLEYSTQKIMGP----------- 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + + F + ++ Y+ L + +++T + + R + + Sbjct: 122 GVKTYPTTLSNEAFTIFGLHIQLQQIYIFAITIVLMLILTFVVKKTKVGRSMRAVSVDAD 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + I+P M I + GG+ Sbjct: 182 AAKLMGINVDATISYTFAIGSALAGAGGVLVGMYYNTINPLM-GMVPGIKAFVAAVFGGI 240 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 L + V L + + + + + Sbjct: 241 GILPGAMFGGFFIGIVESLVTAYGSSLYKDAVVYAILILILIIKPAGLL 289 >gi|187925880|ref|YP_001897522.1| branched-chain amino acid ABC transporter inner membrane protein [Burkholderia phytofirmans PsJN] gi|187717074|gb|ACD18298.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 323 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 124/302 (41%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G S L + Sbjct: 26 FVMKVLCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYVTGYAIQSLGFSPELGVLAGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+I+G+ +++ +G Y A+ TL ++++ + ++ Sbjct: 86 AATLLGLIVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +Y+V+L + L+ +I+ + + I++N+ Sbjct: 132 GLQGVPRGKLFGVLDLSSDVALYFVVLAVMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + + ++ + +VI + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGIAGLAGSLKVLVQGFETLSDAYWTMSGLVILMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + +++ S T + + +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDIGGALATTTGVEWFRSLGESVTIVTGVIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|330969709|gb|EGH69775.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str. M302273PT] Length = 359 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 99/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G+Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGSYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDHFLWAMCLVVLAPGLLALIFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFLATVALLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ + Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352 >gi|120609972|ref|YP_969650.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120588436|gb|ABM31876.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax citrulli AAC00-1] Length = 326 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 122/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS AY +GL+ + + + Sbjct: 30 FVMKLLCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGHAIKVWGLTPEIGLVLGTA 89 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 G++ G +++ +G Y ++ TL ++++ ++ T G+ G+ R Sbjct: 90 GGALLGLLFGWLAIRRQGIYFSMITLALAQMLFFACLQAP-FTGGEDGLQGVPR------ 142 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYYV L + + +I+ + + I++N+ Sbjct: 143 -------GKLFGVLDLSSDVTMYYVALAVVVAAFLLIVRTIHSPFGQVLKGIKENEPRAI 195 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AG+ + ++ + VI + ++GG+ +L Sbjct: 196 SLGYDTQRFKLLAFVISAAIAGLAGSLKTLVLGFATLSDVHWTASGQVILMTLVGGLGTL 255 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S +A+++ + + + + + + T + + + +L ++ Sbjct: 256 SGPLVGSAVVVLLENKIGEFGNLLASLTGVDWFRTLGESVTIVTGLIFVVCVLAFRRGIM 315 Query: 341 RL 342 Sbjct: 316 GE 317 >gi|121606498|ref|YP_983827.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120595467|gb|ABM38906.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 358 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 139/345 (40%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF + ++ + + F+ + S S+ I ++I + A G++I+VG Sbjct: 18 QIFPITQDR------VAIGLMLAFAFIAVPLMASDYLYASILIPLVIMSLAAIGVNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY R + + + + + + G++ GLPSL+ +G Sbjct: 72 YCGQISLGSGAFMAVGAYGAYNFFVRIPGMPLIPTLILGGLCAMSFGILFGLPSLRVKGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL + ++ K +TN A V + + + Sbjct: 132 YLAVATLAAQFFSDWMFLRIKWLTNDSASGSV-------------SVTQLQVFGLPIQSP 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y L + + A + L R AI W IRD A + ++AKLSAFAVSS Sbjct: 179 VSKYLFCLAVLVIVALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 IGMAGA +A P F + ++ +VI+GG+ S+ A ++ + Sbjct: 239 IIGMAGALWAFVHLGSWEPAAFSVEISFRLLFMVIIGGLGSIMGGFFGAAFIVVLPIALN 298 Query: 300 GMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + +++ H L RL Sbjct: 299 RFLPAFMSLFGIEISTAGVSHAELMIFGGLIVWFLIVEPHGLARL 343 >gi|300696581|ref|YP_003747242.1| leucine/isoleucine/valine transporter permease subunit (transmembrane abc transporter) [Ralstonia solanacearum CFBP2957] gi|299073305|emb|CBJ52814.1| leucine/isoleucine/valine transporter permease subunit (transmembrane abc transporter) [Ralstonia solanacearum CFBP2957] Length = 299 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 118/302 (39%), Gaps = 41/302 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ + + I + A + + + S GLL++ IGAY+ +L + + + Sbjct: 11 YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++G P+L+ G YLA+ATL E+ + +++ + T G G+ +L Sbjct: 70 GMLAPAVVAVVIGRPTLRLSGVYLAMATLGFGEVVRVLILNTENWTGGALGLNGIPQLTE 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L+ ++ RR+ + A+ I++++ Sbjct: 130 WWH-------------------------VALAVALTLFVLARTRRSKVGRAFEAIKEDET 164 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + KL AF + + G+AGA A I P F F + ++++ ILGG Sbjct: 165 AAGLMGINVAGTKLLAFTLGAVIAGLAGALNAHLTFFIGPSEFGFDRGVEILTMTILGGT 224 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L+ + IL + EL + + + L L++L Sbjct: 225 SGLTGPVLGSMILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269 Query: 339 LL 340 + Sbjct: 270 IW 271 >gi|304317546|ref|YP_003852691.1| inner-membrane translocator [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779048|gb|ADL69607.1| inner-membrane translocator [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 294 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 94/288 (32%), Gaps = 10/288 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GA++ + + L + + Sbjct: 8 LINGLSLGSIYALIALGYTMVYGIMKLINFAHGDIYMVGAFTGFFASTYFHLGFIPSLLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++S G+ + + + D I+ LI + +L G + Sbjct: 68 AMLVSLILGVTIERVAYRPLRDKSKISILITAIGVSLLLEN---------GGIILLSPQV 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F + + + + + + + + +T I A R + + Sbjct: 119 RTYPQIFKQHMYSFFNGIITISNQQIVIFVVSIIMMVGLQIIIYKTKIGKAMRAVSTDAD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA +AG + I P M + +LGG+ Sbjct: 179 AAKLMGVNVDRTVSFTFAIGSALAAVAGVLVGIYYNSIDPLM-GIMPGLKAFIAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + ++ + L G + + F + + Sbjct: 238 GIIPGAMVGGLLMGVIEALVSGYGSSLYRDGVSFAILIIILLIKPTGL 285 >gi|226356447|ref|YP_002786187.1| branched-chain amino acid ABC transporter permease [Deinococcus deserti VCD115] gi|226318437|gb|ACO46433.1| putative branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] Length = 340 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 70/334 (20%), Positives = 134/334 (40%), Gaps = 36/334 (10%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 K+ L A L+F FL ++++ +G L+ + A I+ G +SL Sbjct: 35 KLWPLAAFFALALIFPFLPLGDKREFLLQIGFFTLVAGIMALSWDILA-RSGQVSLAHAA 93 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 Y +GAY+Y +L + +P++A+++G +++G +++ G Y AIATL +E+ Sbjct: 94 FYGLGAYTYALLLKTGLPWL-AAMPLAALLAGLFSLVLGAVTMRLSGMYFAIATLAFTEV 152 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + ++ G A + L Y + L + Sbjct: 153 IRTVIQNLPESVAGGANGMLVPAL-------------------LGGNSRGQYLLALSLLL 193 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L+ + L +R T + +A+ IR ++ L +I+ KL+AF +SS +AG +A Sbjct: 194 LTVGVSLAVRLTRLHHAFAAIRQGEETARVLGVSIVRYKLAAFFISSVLAALAGVLYAGK 253 Query: 253 RDRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 I+P + F + +I ++ I GG+ + +L E+ Sbjct: 254 TFFINPLETFSLANSIAPLTTSIFGGLYTTLGPVLGATVLRVAEEIL------------- 300 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + + + L L IL L+ L Sbjct: 301 -HNNVKNGYLVVYGLVLMLSILWLPRGLMGLLRR 333 >gi|221068781|ref|ZP_03544886.1| inner-membrane translocator [Comamonas testosteroni KF-1] gi|220713804|gb|EED69172.1| inner-membrane translocator [Comamonas testosteroni KF-1] Length = 309 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 101/305 (33%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + ++ L Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMVGALTSWSCIGLMQEAMPYLPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ A + SL F + +A L S ++ + + + + Sbjct: 68 LMLLIAAIIACVVAASLNFVIEKVAYRPLRSSPRLAPLITAIGVSILLQTLAMIIWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ + + VL A+++ + T + A R +N + Sbjct: 128 --KAYPTLLSSTPYEIGTAVITPTQILVLAVTAIALATLMYLVNYTRLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ M F + + + GG+ Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAHHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G +L + I L +++ +R Sbjct: 245 GNLAGAVVGGLLLGLIESIGSGYIGDLTGGVLG-----SQYTDIFAFIVLIIILTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|163745616|ref|ZP_02152976.1| branched-chain amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] gi|161382434|gb|EDQ06843.1| branched-chain amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] Length = 356 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 123/345 (35%), Gaps = 11/345 (3%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + Y I AV+ L LF + +I I+++ +++G G++S Sbjct: 5 STYGTIAVKTAVLQIAALLLFAPFLFQDVRALEVAARICIFIVLVASYDLLIGYTGIVSF 64 Query: 69 NCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + + GAY I ++ L ++S +GL SL+ + + A+ Sbjct: 65 AHTMFFGFGAYGAAISLREMGPGWDAVALGAVAGVLVSLIVATAVGLLSLRVKAIFFAMI 124 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIF 182 TL + + + + T G+ GI V + R + ++ Sbjct: 125 TLATASVALVLASQLSQFTGGEDGITYRAPDLFKTATKLMVDEDGKVVRLFGVKLNGKLA 184 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY + ++L + + + + IR+N+ ++ ++ + F +S+A Sbjct: 185 AYYFVFFTSLALFLLMLRVVAAPLGSVLKAIRENEARAEAIGYRVVAYRTFVFCLSAAVA 244 Query: 243 GMAGAFFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 +AG +A PD F+ I ++ +V++GGM ++ +++ + Sbjct: 245 SLAGTIYAVWLKYTGPDTTLSFAIMIDILLMVVIGGMGTMWGAVVGAVLMVMAQYYLRDL 304 Query: 302 ----NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L + R + I L++ + Sbjct: 305 MGAAAEATASLPLLPELLDPDRWLFWLGIIFILLVYFFPRGITGT 349 >gi|56421514|ref|YP_148832.1| branched-chain amino acid ABC transporter permease [Geobacillus kaustophilus HTA426] gi|56381356|dbj|BAD77264.1| branched-chain amino acid ABC transporter (permease) [Geobacillus kaustophilus HTA426] Length = 292 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 103/303 (33%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ + +G++ + G+ + + + Sbjct: 7 LVNGISLGSIYALIALGYTMVYGIVRLINFAHGDVFMVGSFVGFYAVTMLGVGFFPALLL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + GMI+ + K + IA LI + ++ G Sbjct: 67 AMASCAVLGMIIERIAYKPLRNAARIAVLITAIGVSLLIEYVTIYLRGAQ---------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ V+ ++L L + + RT I A R + + + Sbjct: 117 PEAYPSTLLPDRNLKLFGVVISSQSLFILGTSLVLMILLQFIVHRTKIGKAMRAVSHDAE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + FA+ SA G AG F +I P M + +LGG+ Sbjct: 177 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYTKIEPLM-GILPGLKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + +L + L G+ + + + F + L L+++ R Sbjct: 236 GIIPGAMVGGLLLGVIESLVSGLGYSLWRDGVAF-------------VILILILIFRPAG 282 Query: 339 LLR 341 L Sbjct: 283 LFG 285 >gi|84502255|ref|ZP_01000403.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] gi|84389615|gb|EAQ02334.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] Length = 355 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 123/340 (36%), Gaps = 11/340 (3%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I L V+ L LF + +I I+V+ +++G G++S + Sbjct: 8 IAVKLVVLGIGALLLFAPFLFQDVRSLEVAARICIFVVLVASYDLLIGYTGIVSFAHTMF 67 Query: 74 YAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + GAY I + L +S + +GL SL+ + + A+ TL + Sbjct: 68 FGFGAYGAAILLKAMGPGWTPVILGALAGVAVSLVFAVAIGLLSLRVKAIFFAMITLAAA 127 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTT---VRSLIRFFRFPSSFVIYEIFMYYVL 187 + ++ + +T G+ GI F T + + R + ++ YY + Sbjct: 128 SVVLVLVSQLSQLTGGEDGITYRAPDVFKPATKILTDADGKVLRIFDVRINGKLAAYYFV 187 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++L + + + IR+N+ ++ ++ + F +S+ F +AG Sbjct: 188 FFTSLIMFLMLLRFVGSPLGTVLKAIRENEGRAEAIGYRVVAYRTFVFCLSAVFASLAGT 247 Query: 248 FFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +A PD F+ I ++ +V++GGM ++ ++I + Sbjct: 248 VYAVWLKYTGPDTALSFAIMIDILLMVVIGGMGTMWGAVIGAVLMIMAQYYLRDLMGAAS 307 Query: 307 NSLLKFD----CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +L R + I L++ + Sbjct: 308 EALHGLPVLPELLAPDRWLFWLGIIFILLVYFFPKGIAGT 347 >gi|50121074|ref|YP_050241.1| putative branched-chain amino acid transport system, permease [Pectobacterium atrosepticum SCRI1043] gi|49611600|emb|CAG75048.1| putative branched-chain amino acid transport system, permease component [Pectobacterium atrosepticum SCRI1043] Length = 366 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 95/324 (29%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 50 PLAISTYTLTLIGKILCYAIVAVALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 109 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138 W +P + + L L + ++ Sbjct: 110 EGMPAFMSFLSWTELPWFWAGTQYFVWALCLIVLVPGVLAFVFGWFAFRSKIKGVYFSIM 169 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G + + + FP + I ++ + + S + Sbjct: 170 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRIGLFIATVLLLTASLLVG 229 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 230 FALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALYVPQVGIINP 289 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L I+ G F +F Sbjct: 290 SEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKSW--------------FTVAFPE 335 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + LV L ++ L Sbjct: 336 YWLFFLGLMFILVTLFLPRGVIGL 359 >gi|67925780|ref|ZP_00519081.1| inner-membrane translocator [Crocosphaera watsonii WH 8501] gi|67852373|gb|EAM47831.1| inner-membrane translocator [Crocosphaera watsonii WH 8501] Length = 382 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 65/366 (17%), Positives = 133/366 (36%), Gaps = 63/366 (17%) Query: 44 IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103 +Y +FA GL++ G GL++ V +GAY+ V+L + + + A+++ Sbjct: 21 TSAGVYGIFALGLNLQWGFTGLINFGVVGFMTLGAYTSVLLTRQG-FPFIVAVLAGAILA 79 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 G+++GL +L+ R DYLAI T+ +SE+ + + + + +TNG G+ + T+ Sbjct: 80 AILGLLIGLSTLRLREDYLAIVTIGVSELVRLVALNEEWLTNGALGLRQYPLPLNIEATL 139 Query: 164 RSLIRFFRFPSSFVIYEIFMYY------------------------------------VL 187 + + +Y + Y +L Sbjct: 140 PIKLLLILVLTLLAVYAEWTLYKSLAFQWKQNKEIQGKSYQPRKPFSLIIWGVLATSLIL 199 Query: 188 LGMCFLSASIILWLRRTAISNAWRTI-----------------------RDNQKAFFSLN 224 L + ++ + ++ + ++ R++++ +L Sbjct: 200 LAFITGTTALWFYTYKSGLMVLVLSVLAIIYASLEFLVHSPWGRILKAIREDEEVPRALG 259 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 I+ KL +F + A G +GAFFA I PD F+ IV+LGG S + Sbjct: 260 KNILLYKLQSFMLGGAIAGTSGAFFAWQLTTIYPDKFEPLITFNTWIIVVLGGSGSNAGT 319 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 I L + + ++ + L ++++ R +L + Sbjct: 320 LLGAVIFWAYDSLTRFVLPQLQ---ILSPSQLGYFRIMVIGLILMVLMVWRPQGILGKKE 376 Query: 345 PSNFLE 350 Sbjct: 377 ELTLGR 382 >gi|171318302|ref|ZP_02907462.1| urea ABC transporter, permease protein UrtC [Burkholderia ambifaria MEX-5] gi|171096504|gb|EDT41401.1| urea ABC transporter, permease protein UrtC [Burkholderia ambifaria MEX-5] Length = 394 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++G +++ Y + A L +V G G+LSL + Sbjct: 51 IAIGVGVPLAALVAPESSAFHLSAYAMTLGGKLMCYAIAALALDLVWGYCGILSLGHGLF 110 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 111 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 170 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I + + + R F + Sbjct: 171 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRIAGFAIT 230 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 231 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 290 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+ G+AGA + I+P +I + V +GG +L + G Sbjct: 291 TLSAMLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 350 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F F + + LV L+ ++ L Sbjct: 351 SF--------------FTAHFAEYWLFFLGLIFVLVPLLLPRGIMGL 383 >gi|330960032|gb|EGH60292.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 359 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 96/324 (29%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 GFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMREAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWTGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVVLLVACLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVMCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352 >gi|158314770|ref|YP_001507278.1| ABC transporter related [Frankia sp. EAN1pec] gi|158110175|gb|ABW12372.1| ABC transporter related [Frankia sp. EAN1pec] Length = 930 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 117/306 (38%), Gaps = 19/306 (6%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 +L + ++ L L + ++G + L ++V + G +SL V Sbjct: 310 LLAGVGLLVALGLVPSFAGIHLTDWTAALGT-----AIVFLSLGLLVRTSGQVSLCHVSF 364 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 AIGA ++ L + L + + V+ +I+ G ++ +P+++ G YLA+AT Sbjct: 365 MAIGAAAFSHLAVGHDLPWLVALLVTGLIAVPVGAMLAVPAVRLSGLYLALATFGFGIFL 424 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 Q +L + R + V F YY++L M Sbjct: 425 QYMLYTQDYMFGSMGAGLSEPRPHLSWLNVEDDKGF--------------YYLVLVMAVA 470 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++++ L R+ + R + ++ A+ + T+ ++ F VS+ + GA A ++ Sbjct: 471 AVTLLVILDRSRLGRLLRGLAESPTAWETSGVTVSVTRVLVFCVSAFMAAVGGALTAVAQ 530 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +S D ++ ++ ++VI+ + L + G N L Sbjct: 531 STVSADAYQPMLSLTYFAVVIVALGGNPWYALTGAGALELIPSYISGENTAAVLQLGFGL 590 Query: 314 CSFNMR 319 + + Sbjct: 591 AAVGVA 596 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 33/290 (11%), Positives = 81/290 (27%), Gaps = 12/290 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ + +Y + GL + + G+ + A+ AY + L G + + Sbjct: 6 PFLVAGLTTGAVYGLAGTGLVLTYKTSGVFNFAHGAVAALAAYVFYSLWVSQGWPWPVAV 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V+ + +G ++ +F + + ++ + G Sbjct: 66 AVAVVAAGPVLGLVQELLARFIQGSSLALQVAATVGLLLVVQAVLVLVYGTLETRTVPIF 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + + ++A + + RR + A R + D+ Sbjct: 126 LGSGNVRLAGTNVRWADIAT----------FAFAVVVTAGLSVMFRRARLGLAMRAVVDD 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 T+ + A+ + + +G FA + + + Sbjct: 176 PALLDLAGTSPRQTRRFAWCIGATLAAASGVLFAPLLPLDVLQLTLLVVAAFGAAAIGA- 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 TSL ++ + L + L F + L+V Sbjct: 235 -FTSLPLTFAGGLVIGVLASLATRYFTTGLLAGLPPALPFAVLFLVLLVF 283 >gi|209519226|ref|ZP_03268028.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. H160] gi|209500306|gb|EEA00360.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. H160] Length = 399 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 102/349 (29%), Gaps = 32/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ L V + L+ A Y ++ + + Y + A L +V G G+LSL Sbjct: 55 LIVVFGLGVPFAALVIPETSALHLSAYAMTLTGKFMCYAIAALALDLVWGYCGILSLGHA 114 Query: 72 IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113 + +A+G Y+ + G +++ L Sbjct: 115 LFFALGGYAIGMYLMRAIGHDGKYGSDLPDFMVFLDWHQLPWYWHGTQHLGYALLLVVLV 174 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 + + +I Y + + R FP Sbjct: 175 PAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFP 234 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + + + + + + + +RD + L + + KL Sbjct: 235 ITHQGTRAALLLITFAVLIAAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 294 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 295 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIIGAFAVNG 354 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F +F + + LV L+ + ++ L Sbjct: 355 AKSF--------------FTANFPEYWLFFLGLIFVLVPLLLPNGIMGL 389 >gi|291279057|ref|YP_003495892.1| branched-chain amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290753759|dbj|BAI80136.1| branched-chain amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 315 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 74/327 (22%), Positives = 141/327 (43%), Gaps = 30/327 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++FL + + ++G +IY + A IV+G G+ + + + +G Sbjct: 7 LIGFLIFIIFLIVFPFMANSRWLAVGTTFIIYSIVALSQDIVLGRAGMFDMGHALFFGLG 66 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS IL + Y + + IPV+ ++ G+++ P + RGDYL + T+ + +F+ +L Sbjct: 67 AYSTAILNTVYNVPVMWTIPVAVLLPMVFGVLLAAPIIHLRGDYLLVTTIGFNIVFEQVL 126 Query: 138 -IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 IT G GI+ G + + +YY+ + L+ Sbjct: 127 KNNLFGITGGPNGIFGIGVPSIFGFQIMTQQ--------------SIYYMSFVVLMLTFF 172 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 II L + I A + ++ A + F +L AF + +A G+AG FA + Sbjct: 173 IIRNLETSKIGRALHYLNEDSLAAECVGINTRFYRLYAFGLGAALAGLAGVLFAVQYAAV 232 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP+ F F ++++ +IVI+GG +S+ I T ++ + E+ F Sbjct: 233 SPEAFSFIQSVLFFTIVIVGGPSSIPGILIGTFVMFVLPEIFR---------------QF 277 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343 + IA+ L +++R + + Sbjct: 278 ATARYFVFGIAMILTMILRPRGVWPAK 304 >gi|326316121|ref|YP_004233793.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372957|gb|ADX45226.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 326 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 122/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS AY +GL+ + + + Sbjct: 30 FVMKLLCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVAGHAIKVWGLTPEVGLLLGTA 89 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 G++ G +++ +G Y ++ TL ++++ ++ T G+ G+ R Sbjct: 90 GGALLGLLFGWLAIRRQGIYFSMITLALAQMLFFACLQAP-FTGGEDGLQGVPR------ 142 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYYV L + + +I+ + + I++N+ Sbjct: 143 -------GKLFGVLDLSSDVTMYYVALAVVVAAFLLIVRTIHSPFGQVLKGIKENEPRAI 195 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AG+ + ++ + VI + ++GG+ +L Sbjct: 196 SLGYDTQRFKLLAFVISAAIAGLAGSLKTLVLGFATLSDVHWTASGQVILMTLVGGLGTL 255 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S +A+++ + + + + + + T + + + +L ++ Sbjct: 256 SGPLVGSAVVVLLENKIGEFGNLLASLTGVDWFRTLGESVTIVTGLIFVVCVLAFRRGIM 315 Query: 341 RL 342 Sbjct: 316 GE 317 >gi|237654019|ref|YP_002890333.1| inner-membrane translocator [Thauera sp. MZ1T] gi|237625266|gb|ACR01956.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 358 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 76/329 (23%), Positives = 125/329 (37%), Gaps = 17/329 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + + ++ I L+ + A G++++VG G ++L AIG Sbjct: 28 FVWGLIAFAALAVPMLADEYMFRAILIPFLVLSLAALGVNLLVGYCGQITLGAGAFMAIG 87 Query: 78 AYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY+ R L + + + + A G++ G+PSL+ RG YLA+ATL + Sbjct: 88 AYAAYNFMVRIDGMPLVLAMLLGGVSAAAFGILFGIPSLRVRGLYLAVATLAAQFLCDWA 147 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ TN + V+ + V Y L A Sbjct: 148 FLRIGWFTNHSSSGSVSVAKLEMLGWVIDSPTEK-------------YLFCLAFVIAFAF 194 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDR 255 I L R AI W IRD A + +FAKLSAFAVSS F+G+AGA + Sbjct: 195 IAKNLTRAAIGRQWMAIRDMDVAAEVIGIRPMFAKLSAFAVSSFFVGVAGALWGFVHLGS 254 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY--FNSLLKFD 313 P F + ++ +VI+GGM S+ A ++ + + Sbjct: 255 WEPAAFSVDRSFQLLFMVIIGGMGSIMGSFFGAAFIVILPIFLNQFLPLLGSLVGVTVST 314 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +++ H L RL Sbjct: 315 AGISHAELIIFGSLIIFFLIVEPHGLARL 343 >gi|107025706|ref|YP_623217.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|116693112|ref|YP_838645.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|105895080|gb|ABF78244.1| L-leucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein [Burkholderia cenocepacia AU 1054] gi|116651112|gb|ABK11752.1| L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein [Burkholderia cenocepacia HI2424] Length = 319 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 23 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 82 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 83 VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 139 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 140 ----RDVSVPVLISGAFEIHLGGDYDVTIPYARLLIVCVTLVLMIALTLFISHSRMGRAC 195 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + + + G + +++P F I Sbjct: 196 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 254 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 255 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 301 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 302 ILLFRPTGLLG 312 >gi|51893334|ref|YP_076025.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51857023|dbj|BAD41181.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 339 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 126/332 (37%), Gaps = 30/332 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + L V+ L FL +Y+ S+ I ++ +FA +++G G++S Sbjct: 16 RFGWILPLLVIAALYALPFLPGLGQNRYLLSLLIGAFVFAVFAMSFDLLLGYTGIVSFGH 75 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + + G Y+ +L +G+ W + ++ I+ +++G SL+ RG Y A+ ++ + Sbjct: 76 ALFFGAGTYAAALLAKYHGVGFWASLALAPAIAAVLALVIGALSLRVRGVYFAMVSMAFA 135 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 E F+ K+ +T G G+ V + + + + + Sbjct: 136 EFFRVAAEKFSSVTGGSDGLSVQVAPDWAYGPRHRIELYLLTLTLAAVV----------- 184 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + + IR+N++ ++ + KL A ++ A +AG +A Sbjct: 185 ----YLALRRIIHSPFGRVLVAIRENEQRAAAIGYNVFAFKLGAIVLAGAVAAVAGVMYA 240 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 A+ + + P + I V+ + I+GG +L A ++ L + Sbjct: 241 ATENFVVPTVLSTETTINVLLMTIIGGAGTLGGPALGAGVVRLAGTLLSSYTDRW----- 295 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L++L H + L Sbjct: 296 ----------RLALGLLYALIVLFLPHGIAGL 317 >gi|148253469|ref|YP_001238054.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146405642|gb|ABQ34148.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 382 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 102/354 (28%), Gaps = 42/354 (11%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ ++ + L + + + L++ M +++ G G+L+L + + GA Sbjct: 10 AIYAAFIVLIMLVPLIMDSFWLNRLAKYLVFGMLGIAVALSWGYAGILNLGQGLFFGAGA 69 Query: 79 YSYVILGS--------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 Y + +W P + L + Sbjct: 70 YMLAMSLKLASSTSLQQGSDKPVPDFMLWNAEPGAKTELCCINKASFLWLPFQSQWFGVA 129 Query: 125 ATLIMSEIFQNIL----------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 LI+ +L I + + + A + + L Sbjct: 130 MGLILPVAIAFVLGSIVFRKRIAGVFVSIITLALVLLVRLVMIDAQPVTNGFNGLTDLGW 189 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 F F Y + YY++ + L T + IRD+Q L + Sbjct: 190 FKLGGFEFDPYVVPTYYLIAVSLSVVLIAARLLVETRAGVILQAIRDDQNRARYLGFDVP 249 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 + FAVS+ G AG + + SP S +I ++ +GG S+ Sbjct: 250 AYQTFFFAVSALIAGFAGMLYVIVSEFASPTFMDLSFSITMVVWAAVGGRASILGACIGA 309 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + F ++ + LV+L + L Sbjct: 310 ILINMISATVSE------------TEGFAEAWKAIIGLIFVLVVLYMPRGIAGL 351 >gi|312127556|ref|YP_003992430.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis 108] gi|311777575|gb|ADQ07061.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis 108] Length = 312 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 73/338 (21%), Positives = 134/338 (39%), Gaps = 42/338 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K + +V L + L + YI I++ ++ A L+++ G G S Sbjct: 1 MKKRLLVYSAFIIVLYLTITLLMKIGIIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L AIGAY+ +L + +L + + + + CG+I+GLP L+ RGDYLAIAT Sbjct: 61 LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGLIIGLPVLRLRGDYLAIAT 120 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ + G +GI + Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + LS +IL + ++ A IR+++ A ++ K+ AF + + F G+AG Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + ++ S I PDMF F ++I ++ IV+ + ++ Sbjct: 215 SIYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + L + L +++L R L+ + Sbjct: 260 TIISALLQDYPAVRMVLYSLILIIIMLFRPQGLMGTKE 297 >gi|264677221|ref|YP_003277127.1| inner-membrane translocator [Comamonas testosteroni CNB-2] gi|299530765|ref|ZP_07044180.1| inner-membrane translocator [Comamonas testosteroni S44] gi|262207733|gb|ACY31831.1| inner-membrane translocator [Comamonas testosteroni CNB-2] gi|298721281|gb|EFI62223.1| inner-membrane translocator [Comamonas testosteroni S44] Length = 330 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 128/302 (42%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G GLLS AY +G + + + + + Sbjct: 34 FVMKLMCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVAGYTIKAWGFTPEVGMLLGTV 93 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G G+I G +++ +G Y ++ TL ++++ + ++ T G+ G+ R Sbjct: 94 VGGLLGLIFGWLAIRRQGIYFSMITLALAQMLFFVALQA-KFTGGEDGLQGVPR------ 146 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYYV L + + +I+ + + I++N+ Sbjct: 147 -------GKLFGVIDLSSDMVMYYVALIIVAAAFLLIVRTIHSPFGQVLKAIKENEPRAI 199 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+A G+AG+ + ++ + VI + ++GG+ +L Sbjct: 200 SLGYDVNRFKLLAFVISAALTGLAGSLKTLVLGFATLSDVHWTTSGHVILMTLMGGLGTL 259 Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S +A+++ + + + +++ + T + + L +L+ ++ Sbjct: 260 SGPLLGSAVVVALENKIGEFGSFLAHATGVEWFSTLGESVTIVTGLIFVLCVLLFRKGIM 319 Query: 341 RL 342 Sbjct: 320 GE 321 >gi|288549661|ref|ZP_05967739.2| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Enterobacter cancerogenus ATCC 35316] gi|288317791|gb|EFC56729.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Enterobacter cancerogenus ATCC 35316] Length = 329 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 96/310 (30%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----YVILGSRYGLSIW 93 + + + IY + A G ++V G L +++ +GA + + + + Sbjct: 21 LINGVMLGSIYALIALGYTMVYGILRIINFAHGDILMVGALTTLSALNALNTTFPHMPQL 80 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + + I+ A ++ + +F L A + I + Sbjct: 81 LQLGFALSIAMAVCALLAMAVERFAYRRLRNAPRLAPLISGIGVSVLLQTVAMIIWTRNP 140 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + I I + + + + L + T + R + Sbjct: 141 LMFPQILPMDPIAITAGSEAHPPAIITVTGIVTVALALIVMIGLWLLVEYTRLGRGMRAV 200 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + + FA+ F +AG A++ S M F I + Sbjct: 201 AENPRVATLMGVNPNAIITLTFAIGGMFAALAGVMMASNYGNASFSM-GFLPGIKAFTAA 259 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ ++ +L + L G + + + I L LV++ Sbjct: 260 VLGGIGNIRGAMIGGILLGVIEALGAGYLGELTDGVFG-----SNYQDVFAFIVLILVLV 314 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 315 FRPAGLLGER 324 >gi|170740837|ref|YP_001769492.1| urea ABC transporter permease protein UrtB [Methylobacterium sp. 4-46] gi|168195111|gb|ACA17058.1| urea ABC transporter, permease protein UrtB [Methylobacterium sp. 4-46] Length = 545 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 102/330 (30%), Gaps = 21/330 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 AV L ++ Y S+G + ++ A GL+I G +G++++ +GA Sbjct: 236 AVAGIAFRLAILANLQNAWYGISLG---SVLLLAAIGLAITFGVMGVINMAHGEMVMLGA 292 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ ++ L S I+ ++ I + + +L Sbjct: 293 YTTFLVQEVIRQRAPGLFDWSLPIAIPLAFLVAGAVGIVIER--GIIRFLYGRPLETLLA 350 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 W + G+ S + ++++ + + Sbjct: 351 TWGVSLILQQGVRSLFGPTNREVGAPSY-MSGAVDVFGLAITWGRLWIVVFALAVFVGLN 409 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L L+ T+ R + N++ ++ + F + S G+AG A S+ Sbjct: 410 LILKATSFGLKTRAVTQNRRMAAAMGIRTPWIDAFTFGLGSGIAGIAGV--ALSQIDNVS 467 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 S I +V+ GG+ +L A L + Sbjct: 468 PNLGQSYIIDSFLVVVFGGVGNLWGTLVAALTLGAANKFLEPYAGAVLGK---------- 517 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 L++I + L I R L L+ + Sbjct: 518 ---ILLLIFIVLFIQKRPRGLFALKGRAVE 544 >gi|114707992|ref|ZP_01440883.1| probable urea or short-chain amide ABC transporter, permease protein [Fulvimarina pelagi HTCC2506] gi|114536533|gb|EAU39666.1| probable urea or short-chain amide ABC transporter, permease protein [Fulvimarina pelagi HTCC2506] Length = 384 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 105/365 (28%), Gaps = 39/365 (10%) Query: 3 IFSLRLNKYDKILCLLAVVYPLLLFLFLG------ATKSQKYIDSMGIQILIYVMFAWGL 56 IF+ L L LL V +L+ + Y + + + Y + A L Sbjct: 2 IFAKYLGPRVWFLVLLLVAAAILVPMASLWLPRSHPLHVPSYAVPLIGKYICYALLALSL 61 Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 +V G LG+LSL +A+G Y+ + R S + LP Sbjct: 62 DLVWGYLGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGDPVLPDFMVFLNWQELPWYW 121 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLY 157 D A L++ + + + D + Sbjct: 122 SGFDQFWFAALMVMVAPGLLAFVFGFFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGF 181 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + F ++ + I+ + R+ + N +RD + Sbjct: 182 GGNNGLTDFKDILGFSIQAPETRASLFAASCIALAIGVLIVGAITRSKLGNLMIAVRDAE 241 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + + KL AF VS+ G+AGA + I+P F +I V+ +GG Sbjct: 242 SRTRFIGWRPEYVKLFAFTVSAVMAGIAGALYVPQVGIINPGEFDPVNSIEVVVWAAVGG 301 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 +L ++ + + ++ V + Sbjct: 302 RGTLIGPVLGALLVNYGKTVFTSIA--------------PQYWLFVLGGLFVFVTIFLPR 347 Query: 338 SLLRL 342 ++ Sbjct: 348 GIVGT 352 >gi|328542454|ref|YP_004302563.1| ABC transporter livM-like permease [polymorphum gilvum SL003B-26A1] gi|326412201|gb|ADZ69264.1| ABC-type transporter, livM-like permease component [Polymorphum gilvum SL003B-26A1] Length = 359 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 141/345 (40%), Gaps = 19/345 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 ++F +R ++ + + + F+ + T + ++ S+ I L++ + GL+I+ G Sbjct: 18 ALFPIRQDR------IGLGIILAIAFVVIPLTANAFFLTSIMIPFLVFALATIGLNILTG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G LSL +GAYS + ++ L+I +S + S G++ GLPSL+ +G Sbjct: 72 YAGQLSLGTGAFMGVGAYSAYKLTSIFPEANLILVILLSGVFSAGIGVVFGLPSLRIKGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ TL + I+ + N V+ F + Sbjct: 132 YLAVTTLAAQFFLEWCFIRIPWLYNYN---------ASGAIEVQQRELFGVIATGAAATP 182 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y+++L + ++ + R I W IRD A + + AKLSAFAVSS Sbjct: 183 LTRYFIVLSIVIALTWLVSNVIRGRIGRQWMMIRDMDIAAELIGVRPLTAKLSAFAVSSY 242 Query: 241 FIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 G+AGA P F S + V+ + ILGG+ SL+ A + + L Sbjct: 243 LCGVAGAMMVFFWLGAAEPSAFAISLSFQVLFMAILGGLGSLTGCYMGAAFIWILPVLLR 302 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + S+ + ++ + ++ H L RL Sbjct: 303 VLLPSLGLSVAA--ETVQHLTFMIVGALIIFFLITEPHGLARLWR 345 >gi|253575736|ref|ZP_04853071.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251844779|gb|EES72792.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 293 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 105/306 (34%), Gaps = 25/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +IY + A G ++V G L +++ + IG++ + + L ++L + Sbjct: 9 LTNGLTIGVIYALIALGYTMVYGILKIVNFAHGDIFMIGSFLGLFFMQEFQLPLYLAFLL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 SA ++ GM++ + + I LI + +L+ G Sbjct: 69 SAAVTAGIGMLIERLAYRPLRLADRIVPLISALGVSTLLVSLAQKLWGTEMHP------- 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +LL L + L++ RT A R + Sbjct: 122 ----FPTTFGSQTYTFGSITFSEIQILILLLSFLLMLGLQLFVTRTKTGTAMRATSMSLT 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + AFA+ S+ AG + + P M + I + +LGG+ Sbjct: 178 NAALMGINTNRMISLAFAIGSSLAACAGIMVGIYYNAVYPTMGYMA-GINAFTAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L V L + S++ F L +V+L+R Sbjct: 237 GNIPGAMLGGVLLGLVETLGGAYISTQYKSVISFS-------------ILIIVLLIRPSG 283 Query: 339 LLRLRT 344 +L + Sbjct: 284 ILGSKE 289 >gi|149378302|ref|ZP_01896011.1| branched-chain amino acid ABC transporter, permease protein [Marinobacter algicola DG893] gi|149357409|gb|EDM45922.1| branched-chain amino acid ABC transporter, permease protein [Marinobacter algicola DG893] Length = 378 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 103/362 (28%), Gaps = 38/362 (10%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIV 59 LR L +L ++ FL + A Y ++ + L Y + A + +V Sbjct: 6 PLRERSTQIFLGVLFAALAIVTFLHVAMPEDSALYVSAYTVTLLGKYLCYALLAVAVDLV 65 Query: 60 VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G LG+LSL +AIG Y+ + R LP Sbjct: 66 WGYLGILSLGHGAFFAIGGYAMGMYLMRQIGDRGTYGDPILPDFMVFLNWQELPWYWLGF 125 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLG 160 D A +++ + + + + + + + Sbjct: 126 DMAWFAFIMVLLAPGLLALVFGFLAFRSRVTGVYLSIITQALTFALMLAFFRNEMGFGGN 185 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + F + ++ + I + + + RD + Sbjct: 186 NGLTDFRDILGFNLRTDATRLGLFIATGIALAIGYVICRGIVTSKLGRVSIACRDAEARA 245 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 L + +L F VS+ G+AGA + I+P F +I V+ V LGG + Sbjct: 246 RFLGYRVDRVQLFVFVVSAMLAGVAGALYVPQVGIINPSEFSPLFSIEVVVWVALGGRAT 305 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L ++ + G+ + LV + + Sbjct: 306 LYGAVIGAVLVNYAKTVFTGV--------------MPDAWLFALGGLFVLVTVFLPKGIA 351 Query: 341 RL 342 L Sbjct: 352 GL 353 >gi|229588137|ref|YP_002870256.1| putative amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229360003|emb|CAY46857.1| putative amino acid ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 355 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 97/320 (30%), Gaps = 27/320 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86 Y ++ +IL Y + A L +V G G+LSL + +A+G Y+ + Sbjct: 47 SAYTLTLVGKILCYAIVALALDLVWGYAGMLSLGHGLFFALGGYAMGMYLMRQASGDELP 106 Query: 87 -RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 W +P + + M L L L + + Sbjct: 107 AFMTFLSWTELPWYWVGTEHFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIMTQAL 166 Query: 146 GKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 AG+ + R + + F + ++ + + S + L Sbjct: 167 TFAGMLLFFRNETGFGGNNGFTNFRSILGFGITEPGTRAVLFVATVALLVASLFLGWRLA 226 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 227 QSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINPSEMS 286 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + +I V LGG +L ++ G+ F +F Sbjct: 287 PTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPEYWLF 332 Query: 323 LMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 333 FLGALFIIVTLYLPKGVIGL 352 >gi|225175945|ref|ZP_03729937.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1] gi|225168533|gb|EEG77335.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1] Length = 290 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 96/303 (31%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + Y + A G ++V G L++ Y GA+ +I+ + GL + + Sbjct: 6 LVNGIVLGSTYALIALGYTMVYGIAELINFAHGEIYMFGAFVGMIMVTIVGLPFLPALVI 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+ + + + +A LI + L + G Sbjct: 66 AMLAAALLGVTVEFIAYRPLRKSSRLAALISAIGASIFLQNAALLRWGPQSQGFPRPFEV 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + V Y+L+ L ++ + +T I A R +++ Sbjct: 126 NQIMV-----------AGVRISSLQIYILVISLVLMVALHFLITKTKIGKAMRATAQDKE 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ SA AG + +S M + +LGG+ Sbjct: 175 TAALMGINVNRVISFTFAIGSALGAAAGVMVGIYFNSVS-PMMGLLPGLKGFVAAVLGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ IL + + + F L +V+L + Sbjct: 234 GNIPGAMLGGIILGIAETMGVAYGDSRYRDAIAF-------------AILIIVLLFKPSG 280 Query: 339 LLR 341 LL Sbjct: 281 LLG 283 >gi|81300703|ref|YP_400911.1| integral membrane protein of the ABC-type Nat permease for neutral amino acids [Synechococcus elongatus PCC 7942] gi|81169584|gb|ABB57924.1| integral membrane protein of the ABC-type Nat permease for neutral amino acids [Synechococcus elongatus PCC 7942] Length = 359 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 120/360 (33%), Gaps = 51/360 (14%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 YI + I ++ +F GL++ G GLL+ V IGAYS +L + +WL Sbjct: 4 YIILLVCTIALFALFCVGLNLHWGYTGLLNFGHVAFLLIGAYSVSLLAQQGWP-LWLAAI 62 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ G++MG+ SL+ DYL I T+ ++E+ + + +T G G+ + Sbjct: 63 AGVTLAALLGLVMGVASLRLSQDYLGIVTVGLAEVLRIFVQNETGLTQGSFGVQAYPIIL 122 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG---------------------------- 189 + + Sbjct: 123 QGWEPPIWQTHLLVVGLLAIAAWGYWQLWQWWRSSASRGKHWLAIVALGSSLIVLPPAAL 182 Query: 190 -------------------MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 +L+ + + L R+ + IR+++ +L ++ Sbjct: 183 GLADYERYPRSGQMLLLLGALWLTVAAVDRLVRSPWGRVLKAIREDETVAIALGKNVLSY 242 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 KL + A+ A G+AG F+A I PD F+ V ++++LGG A+ Sbjct: 243 KLQSLALGGAIAGLAGVFYAWQLTAIYPDNFRPQLTFDVWTMLVLGGTAHRFGPVLGAAV 302 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L + L+ + L +++ R +L R + Sbjct: 303 FWLYDSLTRFLLPAILPLD---GSQIGALRIALVGLLLMALMIWRPQGILGRREELSLGR 359 >gi|270260924|ref|ZP_06189197.1| transporter [Serratia odorifera 4Rx13] gi|270044408|gb|EFA17499.1| transporter [Serratia odorifera 4Rx13] Length = 358 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 97/333 (29%), Gaps = 27/333 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ Sbjct: 33 FLALLPADHPLAISTYTLTLAGKILCYAVVAVALDLVWGYAGLLSLGHGLFFALGGYAMG 92 Query: 83 IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + S S +M L + A Sbjct: 93 MYLMRQAAGDGLPAFMSFLSWSELPWFWSGTQYFAWALCLMILVPGVLAFVFGYFAFRSK 152 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + ++ G + + + FP + + ++ + Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRVALFLATVL 212 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + S +I L R+ +RD + KL + +S+ G+AGA + Sbjct: 213 LLAASLAIGFALARSKFGRVLTAVRDAENRLTFCGYDPKGFKLFVWTLSAVLCGLAGALY 272 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I+P + +I V LGG +L I+ G Sbjct: 273 VPQVGIINPGEMSPTNSIEAAIWVALGGRGTLVGPLLGAGIVNGAKSW------------ 320 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + + +V L ++ L Sbjct: 321 --FTVAIPEYWQFFLGLMFIIVTLFLPKGVIGL 351 >gi|163792962|ref|ZP_02186938.1| ABC-type branched-chain amino acid transport system, permease component [alpha proteobacterium BAL199] gi|159181608|gb|EDP66120.1| ABC-type branched-chain amino acid transport system, permease component [alpha proteobacterium BAL199] Length = 378 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 100/364 (27%), Gaps = 39/364 (10%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYI------DSMGIQILIYVMFAWGLS 57 L L++ L V +L+ + S + + L Y + A + Sbjct: 1 MPLGLSRIGVAFLLSLAVAAVLVPVLNLTVASDSTWHVSTTNVVLFGKYLCYALLALSID 60 Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 +V G G+LSL +A+G Y+ + R S + LP + Sbjct: 61 LVWGYCGILSLGHGAFFALGGYAMGMHLMREIGSRGVYGNPVLPDFMVFLNWKELPWYWY 120 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYF 158 D A L++ + + + D + Sbjct: 121 GFDQFWFAALMVVLAPGALAFVFGMFAFRSRVTGVYLSIITQAMTFALLLAFFRNDMGFG 180 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F ++ + + + + +RD + Sbjct: 181 GNNGLTDFKGVLGFDLQNNATRCGLFALSAIALAGGFLACRAIVSSKLGKVLVAVRDAES 240 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + KL F VS+ G+AGA + I+P F + +I + V +GG Sbjct: 241 RTRFIGYRVEHYKLFVFTVSAMMAGVAGALYVPQVGIINPGEFAPANSIEAVIWVAVGGR 300 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L A ++ G + + V L Sbjct: 301 GTLVGAALGALVVNVGKSWFTG--------------ALPELWLFALGGLFIFVTLFLPKG 346 Query: 339 LLRL 342 LL L Sbjct: 347 LLGL 350 >gi|302871815|ref|YP_003840451.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47] gi|302574674|gb|ADL42465.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47] Length = 312 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 135/338 (39%), Gaps = 42/338 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K + + +V L++ L + YI I++ ++ A L+++ G G S Sbjct: 1 MKKRLVVHSVFVIVLYLIITLLMKIGMIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L AIGAY+ +L + +L + + + + CG I+GLP L+ RGDYLAIAT Sbjct: 61 LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGFIIGLPVLRLRGDYLAIAT 120 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ + G +GI + Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + LS +IL + ++ A IR+++ A ++ K+ AF + + F G+AG Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVMAFMIGAFFAGVAG 214 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + ++ S I PDMF F ++I ++ IV+ + ++ Sbjct: 215 SIYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L + L + L +++L R L+ + Sbjct: 260 TILSALLQDYPAVRMVLYSLILIIIMLFRPQGLMGTKE 297 >gi|330989138|gb|EGH87241.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012526|gb|EGH92582.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 359 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMREAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVLLLIASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352 >gi|239815098|ref|YP_002944008.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239801675|gb|ACS18742.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 309 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 99/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + + S+ Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKESMPGTPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +I + +L F + +A L S ++ + + + Sbjct: 68 LILIIALIIACVVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAMIIWKPTN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ + + +L F ++ + T + A R +N + Sbjct: 128 --KAYPNLLSTTPIEVAGAVISPTQVMILSVTAFSLVVLMWLVNYTKLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ I+ F + + + GG+ Sbjct: 186 VAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYG-IAQHAMGFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G +L + I L +++ +R Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGSLTGGVLG-----SNYSDIFAFIVLIVMLTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|297530333|ref|YP_003671608.1| inner-membrane translocator [Geobacillus sp. C56-T3] gi|297253585|gb|ADI27031.1| inner-membrane translocator [Geobacillus sp. C56-T3] Length = 329 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 122/291 (41%), Gaps = 15/291 (5%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 F + ++ +I I +FA L +++G G++SL + IGAY+ ++G Sbjct: 16 FAMPLVLSDFGINLATEIYIMAIFAMSLGLIMGYGGMVSLGHAGFFGIGAYTVAVIGQHV 75 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + +LL+ +S +ISG ++ G ++ Y + TL ++ + + KP T G Sbjct: 76 ANT-YLLLLLSVVISGLIALVTGAVFIRTSKFYFLMITLAFGQLLYVLFWQLKPWTGGAD 134 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ S+ F ++ +YYV+ +S ++ + Sbjct: 135 GM--------------SVSAVMNFGFGEIVSPNALYYVMGIAFVMSYFLLYLFVGSPAGK 180 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 R + +N+ +L + KL + +S + G+AGA +A +SPD+ + + Sbjct: 181 ITRGVMENEARMSALGYNVRVYKLLVYTLSGSLAGLAGALYAYFNVFVSPDLSSWMFSGQ 240 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 V+ +VI+GG+ +L A ++ + + + + + + Sbjct: 241 VMVMVIIGGVGTLLGPALGASVFVYLQNFMSTYTERWPMIMGGLLVALVLA 291 >gi|313126234|ref|YP_004036504.1| amino acid/amide ABC transporter membrane protein 2, haat family [Halogeometricum borinquense DSM 11551] gi|312292599|gb|ADQ67059.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Halogeometricum borinquense DSM 11551] Length = 426 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 106/343 (30%), Gaps = 43/343 (12%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV------ILGSRYGLSIWLLI 96 I + + +FA + G G LS Y GAY V I L+ Sbjct: 50 MIAVFYFGLFAMSFDFISGYTGYLSFGHAAFYGAGAYLVVLASNGKIPFVPVDTPFVALL 109 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------- 148 + ++ A +I+G+ S + G Y A+ TL S++ + W + + Sbjct: 110 VLGGFVALALAVIIGVVSFRLTGVYFAMITLGFSQVLYVFIRDWDYVGSNPRDGIAVLER 169 Query: 149 ------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 G+ D L + YY++ + + + Sbjct: 170 TAPFNIGVPGVDALNLAIGQLAGESVEGFLGFLTFSPAEVSYYMVGLVVAGCYFALQRIV 229 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MF 261 + IR+N++ ++ KL AFA+S+ F G+AG FA R ++P+ F Sbjct: 230 HSPFGRVLIAIRENEERARAVGYDTFRYKLGAFALSAFFAGVAGGLFAGFRRSVTPENSF 289 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL----------- 310 F + I+GG +++ + E Sbjct: 290 YFLVAGDALLAAIIGGFGTIAGPLFGRLFDETIREFLSKGGEGGGLLPFIDDTLGEATLS 349 Query: 311 -----------KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 D N + I L +L + LL Sbjct: 350 TVLYDGLTVNRAIDTFLNGHAALYLGIVFVLFVLYVPNGLLGT 392 >gi|147676795|ref|YP_001211010.1| ABC-type branched-chain amino acid transport system, permeasecomponent [Pelotomaculum thermopropionicum SI] gi|146272892|dbj|BAF58641.1| ABC-type branched-chain amino acid transport system, permeasecomponent [Pelotomaculum thermopropionicum SI] Length = 318 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 131/328 (39%), Gaps = 37/328 (11%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ + L + L Y + I I+I+ + +++ G G +S + + Sbjct: 6 IVFTLLFALFAVLLPLFVKAPYQMHILILIIIWSVIGTAWNLLGGYAGQVSFGHAAFFGL 65 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ +L Y +S W + + + + + +GL + RG Y A+A L + EIF+ + Sbjct: 66 GAYAAGLLKFHYDISPWWGMLLGPVAASVISLPIGLICFRLRGPYFALAMLALGEIFRLL 125 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 TNG GI + + ++F YY+ L M L+ Sbjct: 126 FTNLTSFTNGARGILIMPEIT---------------------GKMFYYYLGLAMLALTLL 164 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + + +IR++Q A SL K A S+ F G+AGAF+ I Sbjct: 165 TTYLIVHSKVGYYLVSIREDQDAATSLGIPTTRYKNYALLPSAFFTGLAGAFYMNYVAFI 224 Query: 257 SPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 P++ +++VI +V+LGG+ + A+ I + EL Sbjct: 225 DPNIVFNLSNVSVMVILVVMLGGVATTWGPTVGAAMYIFLGELFRT-------------- 270 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + I + L+I+ + ++ Sbjct: 271 TLGSANVLVFGILVCLIIMFLPNGVVGE 298 >gi|239814295|ref|YP_002943205.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239800872|gb|ACS17939.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 309 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 98/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + + S+ Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKESMPGTPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +I + +L F + +A L S ++ + + + Sbjct: 68 LILIIALIIACIVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAMIIWKPTN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ + +L F ++ + T + A R +N + Sbjct: 128 --KAYPNLLSTTPIEVGGAVISPTQVMILSVTAFSLVVLMWLVNYTKLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ I+ F + + + GG+ Sbjct: 186 VAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYG-IAQHAMGFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G +L + I L +++ +R Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGTLTGGVLG-----SNYSDIFAFIVLIVMLTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|260778377|ref|ZP_05887270.1| urea ABC transporter permease protein UrtC [Vibrio coralliilyticus ATCC BAA-450] gi|260606390|gb|EEX32675.1| urea ABC transporter permease protein UrtC [Vibrio coralliilyticus ATCC BAA-450] Length = 390 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 101/349 (28%), Gaps = 33/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + ++ + +L + + S+ + L Y M A + +V G LG+LSL Sbjct: 30 AILAAVVLIPLANVLLPAGHPLHVETFAISLLGKYLSYAMLALAVDLVWGYLGILSLGHG 89 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+G Y+ + R + LP + D A+L++ Sbjct: 90 AFFALGGYAMGMYLMRQIGDRGVYANPELPDFMVFLNWQELPWFWYGFDQFWFASLMVVL 149 Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172 + + + + + + + + F Sbjct: 150 VPGVLAYVFGYLAFRSRVSGVYLSIITQALTYALMLAFFRNEMGFGGNNGLTDFKDILGF 209 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 I ++ S + + + + IRD + + + KL Sbjct: 210 SLQQDSTRIALFIATGIALIFSYLLCRSIVASRLGRVALAIRDTESRTRFMGYDVDGIKL 269 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 F +S+ G+AGA + I+P F +I V+ V LGG +L ++ Sbjct: 270 WVFVLSAVIAGIAGALYVPQVGIINPGEFAPLNSIEVVVWVALGGRATLFGAIVGALLIN 329 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F F + L + L+ Sbjct: 330 YAKSW--------------FTVEFPEVWLFALGGLFVLSTMYFPKGLMG 364 >gi|261419709|ref|YP_003253391.1| inner-membrane translocator [Geobacillus sp. Y412MC61] gi|319766527|ref|YP_004132028.1| inner-membrane translocator [Geobacillus sp. Y412MC52] gi|261376166|gb|ACX78909.1| inner-membrane translocator [Geobacillus sp. Y412MC61] gi|317111393|gb|ADU93885.1| inner-membrane translocator [Geobacillus sp. Y412MC52] Length = 329 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 122/291 (41%), Gaps = 15/291 (5%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 F + ++ +I I +FA L +++G G++SL + IGAY+ ++G Sbjct: 16 FAMPLVLSDFGINLATEIYIMAIFAMSLGLIMGYGGMVSLGHAGFFGIGAYTVAVIGQHV 75 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + +LL+ +S +ISG ++ G ++ Y + TL ++ + + KP T G Sbjct: 76 ANT-YLLLLLSVVISGLIALVTGAVFIRTSKFYFLMITLAFGQLLYVLFWQLKPWTGGAD 134 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ S+ F ++ +YYV+ +S ++ + Sbjct: 135 GM--------------SVSAVMNFGFGEIVSPNALYYVMGIAFVMSYFLLYLFVGSPAGK 180 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 R + +N+ +L + KL + +S + G+AGA +A +SPD+ + + Sbjct: 181 ITRGVMENEARMSALGYNVRVYKLLVYTLSGSLAGLAGALYAYFNVFVSPDLSSWMFSGQ 240 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 V+ +VI+GG+ +L A ++ + + + + + + Sbjct: 241 VMVMVIIGGVGTLLGPALGASVFVYLQNFMSTYTERWPMIMGGLLVALVLA 291 >gi|299068452|emb|CBJ39675.1| leucine/isoleucine/valine transporter permease subunit (transmembrane abc transporter) [Ralstonia solanacearum CMR15] Length = 299 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 119/302 (39%), Gaps = 41/302 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ + + I + A + + + S GLL++ IGAY+ +L + + + Sbjct: 11 YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++G P+L+ G YLA+ATL E+ + +++ + T G G+ +L Sbjct: 70 GMLAPAVVAVVIGRPTLRLSGVYLAMATLGFGEVVRVLILNTESWTGGALGLNGIPQLTE 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L+ ++ LRR+ + A+ I++++ Sbjct: 130 WWH-------------------------VALAVALTLFVLARLRRSKVGRAFEAIKEDET 164 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + KL AF + + G+AGA A I P F F + ++++ ILGG Sbjct: 165 AAGLMGINVAGTKLLAFVLGAMIAGLAGALNAHLTFFIGPSEFGFDRGVEILTMAILGGT 224 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L+ + IL + EL + + + L L++L Sbjct: 225 SGLTGPVLGSVILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269 Query: 339 LL 340 + Sbjct: 270 IW 271 >gi|300865733|ref|ZP_07110496.1| inner-membrane translocator [Oscillatoria sp. PCC 6506] gi|300336264|emb|CBN55646.1| inner-membrane translocator [Oscillatoria sp. PCC 6506] Length = 389 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 103/354 (29%), Gaps = 30/354 (8%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F + + ++ + L+ +F+ + + L + A G+ ++ G Sbjct: 8 FLVNEERRALVIEAAIIAGLALILIFIMPAILPSVRLNQLGRFLALAIAALGIDLIWGYT 67 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLS------IWLLIPVSAMISGACGMIMGLPSLKF 117 GLLSL + +A+G Y++ + + + L Sbjct: 68 GLLSLGHGVFFALGGYAFAMYLKLQIPADASVKLPEFMNLYGVTELPWFWQPFYSFPLSL 127 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGK----------AGIYVADRLYFLGTTVRSLI 167 L A L + + + + +L + Sbjct: 128 IAVVLVPAFLGAFLGYLVFRNRIRGVYFSILTQAATIVFFNFFNGQQKLINGTNGLTDFK 187 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 F + + Y + + + ++ WL IRD++ Sbjct: 188 TIFGATVNSPQTQFIFYTLTILFLAGAYALCRWLTSGRFGRLLIAIRDDEVRVRFSGYDP 247 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 K+ F +S+A G+AGA F ISP + +I ++ V +GG SL Sbjct: 248 TDFKVVVFGISAALAGIAGALFTVQTGIISPKAMDIAFSIEMVIWVAVGGRASLVGAVVG 307 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ L F +V+++ + L+ Sbjct: 308 ALLVNFGKSLLSE--------------QFPEVWLFFQGALFLIVVMVLPNGLVG 347 >gi|77456816|ref|YP_346321.1| inner-membrane translocator [Pseudomonas fluorescens Pf0-1] gi|77380819|gb|ABA72332.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Pseudomonas fluorescens Pf0-1] Length = 359 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 98/320 (30%), Gaps = 27/320 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86 Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 47 SAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAGDGLP 106 Query: 87 -RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 W +P +G+ M L L L + + Sbjct: 107 AFMTFLSWTELPWYWSGTGSFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIMTQAL 166 Query: 146 GKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 AG+ + R + + F + ++ + + S I L Sbjct: 167 TFAGMLLFFRNETGFGGNNGFTNFRTILGFGITEPGTRAVLFLATVLLLVASLFIGWRLA 226 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 227 RSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINPSEMS 286 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + +I V LGG +L ++ G+ F +F Sbjct: 287 PTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPEYWLF 332 Query: 323 LMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 333 FLGALFIVVTLYLPKGVIGL 352 >gi|108803212|ref|YP_643149.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941] gi|108764455|gb|ABG03337.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941] Length = 333 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 123/332 (37%), Gaps = 14/332 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V+ +L L ++ + IQ L++ + +++ G G S + IG Sbjct: 11 LLVLAAGVLVLIPVPLFLSGFLLEVAIQTLLFGLLGVAWNLMGGFAGQFSFGHAAFFGIG 70 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF-RGDYLAIATLIMSEIFQNI 136 AY+ + + YGLS W+ + + A ++ A G+++G S ++ + Sbjct: 71 AYATAVAVTDYGLSPWVGMLLGAALAAAFGVLVGFLSFRYGLKGVFFALATFAFAEMLRL 130 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + N G + R F YYV+L + LS Sbjct: 131 ISRSLEAVNAARGYNIPIRSGNPW-----------LTLQFPQGSPNYYYVILALLALSLL 179 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ L R+ +IR+N+ A +L + KL A A+S+A + GAF+ I Sbjct: 180 AVILLMRSRAGTFILSIRENEDAAAALGVNPMRYKLLAVALSAALTAVGGAFYVQYFFFI 239 Query: 257 SPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 P+ F S +I ++ I+GG+ + + I+ + + + L Sbjct: 240 DPELAFGASVSIQILLPAIVGGIGTTWGPVVGSLIITVLGQGSTALVRTPPPFLEAL-QG 298 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + + LV+L + Sbjct: 299 VSGLDVAIYGALIVLVVLFLPRGVFGTLRERL 330 >gi|322830805|ref|YP_004210832.1| urea ABC transporter permease [Rahnella sp. Y9602] gi|321166006|gb|ADW71705.1| urea ABC transporter, permease protein UrtB [Rahnella sp. Y9602] Length = 522 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 82/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +G+YS ++ S + L+ + +++ + Sbjct: 249 ITYGLLGVINMAHGEMLMLGSYSTYMVQSLFQHYAPGLLALYPLVALPVAFFITAGIGMT 308 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ + + + + Sbjct: 309 LER--TVIRHLYGRPLETLLATWGISLILIQGVRMLFGAQNVEVANPGWLSGGIQLLPNL 366 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V++ + + L L +T + R + N+ + AF + Sbjct: 367 VLPYNRIAVIIFVLLVLGLTWLLLNKTRLGMNVRAVTQNRAMAACCGVPTGRVDMLAFGL 426 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L V ++ Sbjct: 427 GSGIAGLGGV--ALSQLSNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFGLGIVNKI 484 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L + Sbjct: 485 LEPEIGAVLGKILILALIILFIQK-------------RPQGLFAFKGR 519 >gi|294339354|emb|CAZ87710.1| putative ABC-type branched-chain amino acid transport system, permease component [Thiomonas sp. 3As] Length = 328 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 125/302 (41%), Gaps = 16/302 (5%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +G++++ + +FA +++ G GL+S + Y + + +G L I Sbjct: 33 LGMRMMCFALFACAFNLLAGYAGLISFGHAALFGGAGYLTGLALTTWGWPTPLGILTGVA 92 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G++MGL +++ G Y ++ TL +++I ++ T G+ G+ R G Sbjct: 93 TALLIGLVMGLLAVRRSGIYFSMITLALAQIVYFYALQA-HFTGGEDGLQGIPRGTLFGL 151 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S MYY++L + S + + + + +R+N+ Sbjct: 152 PLQSDR--------------VMYYLVLAVFVASWWFMRRVVNSPFGQVLQAVRENEPRAI 197 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL F +S+ F G+AGA A + +S + +VI + ++GG+ + Sbjct: 198 SLGYRVNRYKLGVFLISAGFAGLAGAMKAVVMGFETLTDVHWSTSGLVILMTLVGGLGTD 257 Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 I+ + E ++ + + + + N + ++ L +L+ ++ Sbjct: 258 LGPILGAVIITVLEEKMGTISRFLVHATGVDWFHQLNDSVSMVIGAIFVLCVLLFRRGIV 317 Query: 341 RL 342 Sbjct: 318 GE 319 >gi|291460304|ref|ZP_06599694.1| high-affinity branched-chain amino acid transport protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417059|gb|EFE90778.1| high-affinity branched-chain amino acid transport protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 358 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 24/327 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + L LFL + + + + + IY + A L++VVG G LSL I Sbjct: 19 AMILAAYLAAELFLRSGAAGSLFKGLLVPLCIYSIMALSLNLVVGISGELSLGHAGFMCI 78 Query: 77 GAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 GA+S ++L I + A+ + G ++G+P L+ +GDYLAI TL Sbjct: 79 GAFSSASFSMLMKGQGLPNGLCLFLAIVIGALSAAVFGFLIGIPVLRLKGDYLAIVTLAF 138 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 EI +N++ + + + L I ++ + V + Sbjct: 139 GEIIKNLINALYFGVDERGAHFSLKDGAALKLAGGGRIIIKGAQGITGTPKLSNFTVGII 198 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + LS ++L L + A +RDN+ A S+ KL AF +S+A G AG + Sbjct: 199 LLLLSLFLVLRLMNSRTGRAIAAVRDNRIAAESIGLDAARLKLLAFTISAAIAGAAGVLY 258 Query: 250 AASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + + P F ++++I+++ V+LGG+ ++ A +L + EL +N Y Sbjct: 259 AHNLSSLQALPKNFGYNQSIMILVFVVLGGIGNMRGSVIAAVLLTLLPELLRSLNDY--- 315 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILM 334 + + L L++L Sbjct: 316 ------------RMLIYAVVLILMMLF 330 >gi|284162939|ref|YP_003401562.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631] gi|284012936|gb|ADB58889.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631] Length = 321 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 129/328 (39%), Gaps = 27/328 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L+ VV ++ L + +L+Y+ A L+I++G G +S ++ Y Sbjct: 6 ISLIWVVAVIIAMGLLPVVTKSVTLRETVFIMLMYIALASSLNILLGYTGYVSFGHIVFY 65 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y + L YG SI + + + S +G LK RG Y AIAT+ ++E + Sbjct: 66 GIGGYVAISLIEYYGFSIIPAMIIGGLFSAIIAYALGQAILKLRGAYFAIATIGVNEAIK 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ +PI + D + YY++L + Sbjct: 126 ALVENLEPIGGAEGIYLHID--------------VYNPYGGPENAIWLSYYLMLVVTLAV 171 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + +++++ IR+++ A SL K A+A+S+ F GM GA F Sbjct: 172 VVVSWYVKKSKFGLGLLAIREDEDAAISLGVDTRSYKSLAYALSAFFPGMVGAIFFFKNG 231 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I P F ++++ +I +V+LGG +++ + L Sbjct: 232 NIEPGVAFHLTKSVEMIFMVMLGGFGTIAGPFIGAV------------AYERIRGYLLVS 279 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 +F H + + L L++L ++ Sbjct: 280 EAFKNLHMAISGVILLLIVLFMPRGIVG 307 >gi|313903767|ref|ZP_07837156.1| inner-membrane translocator [Thermaerobacter subterraneus DSM 13965] gi|313465955|gb|EFR61480.1| inner-membrane translocator [Thermaerobacter subterraneus DSM 13965] Length = 326 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 125/338 (36%), Gaps = 41/338 (12%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + A + L+ A Y+ + + I ++ L++V G LG ++ Sbjct: 14 RRAVGWGWAAAAGAVVALYALGEAGWVSSYVTHVLCLVGINIILTASLNLVNGYLGEFAI 73 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 A+GAY +L + L L + + +G ++G+P+ GDYLAI TL Sbjct: 74 GHAGFMAVGAYIAGVLTVKLDLPFALAFLAAGVAAGLVAWLVGIPAFTMFGDYLAIVTLG 133 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + I NI+ + G G+ + + Sbjct: 134 FNMIIVNIINNIDAV-GGPRGMVGLP-------------------------KAANLLWVY 167 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 G + L + A+ IR ++ A + + K+ AF ++ F G+AGA Sbjct: 168 GTVLFMLWLFRNLVDSNYGRAFHAIRQDEVAANLMGIRVRRIKMLAFVLAGFFAGLAGAL 227 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + I+P F + ++ +++++ LGGM SLS ++L ++E G+ Sbjct: 228 WGHLIQYINPGSFTYIKSTEILAMLYLGGMGSLSGSVVGASLLTVLLESLRGL------- 280 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + + L +++L +L R Sbjct: 281 --------GVWRMVISPLILVVIMLRMPRGILGFRELH 310 >gi|206564085|ref|YP_002234848.1| putative amino acid ABC transporter permease [Burkholderia cenocepacia J2315] gi|198040125|emb|CAR56107.1| putative amino acid transport system permease component of ABC transporter protein [Burkholderia cenocepacia J2315] Length = 319 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 23 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 82 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 83 VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 139 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 140 ----RDVSVPVLISGAFDIHLGGDYDVTIPYARLLIVCVTIVLMIALTLFISHSRMGRAC 195 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + + + G + +++P F I Sbjct: 196 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 254 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 255 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 301 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 302 ILLFRPTGLLG 312 >gi|182434888|ref|YP_001822607.1| putative D-ribose ABC transporter substrate-binding/permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775405|ref|ZP_08234670.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|178463404|dbj|BAG17924.1| putative D-ribose ABC transporter substrate-binding/permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655738|gb|EGE40584.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 652 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 104/310 (33%), Gaps = 27/310 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 VV + + L G + + + ++G+Q + + A+G++ V+ S G + L+ A+ Sbjct: 31 ALVVLVVAMSLLSGDFLTTQNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 89 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 A + G+ + L + ++ + ACG + G + ++ Sbjct: 90 ATVLAWSATSAGVPVVLAVVLAIVTGIACGFVNGALVSYGKLPPFIATLAML-------- 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +A L + + + ++ +L M + Sbjct: 142 -------------SIARGLSLVISQGSPIAFPDSVSVLGDTLGGWLPVPVLVMIAMGLVT 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L RT I + I N++A + K+ +A+S F +AG A+ Sbjct: 189 ALILGRTFIGRSMYAIGGNEEAARLSGLRVKRQKIVIYALSGLFAAVAGIVLASRLVSAQ 248 Query: 258 PDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 P + E + ++VI GG+ S IL + ++ F + Sbjct: 249 PQAAQGYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQVVI 308 Query: 313 DCSFNMRHTT 322 + Sbjct: 309 GVVIALAVLL 318 >gi|78061502|ref|YP_371410.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77969387|gb|ABB10766.1| L-leucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein [Burkholderia sp. 383] Length = 319 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 23 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 82 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 83 VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 139 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 140 ----RDVSVPVLISGAFDIHLGGDFDVTIPYSRLMIVCVTLVLMIALTLFISHSRMGRAC 195 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + + + G + +++P F I Sbjct: 196 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 254 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 255 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 301 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 302 ILLFRPTGLLG 312 >gi|42781083|ref|NP_978330.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42737004|gb|AAS40938.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 333 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 131/334 (39%), Gaps = 31/334 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + + I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPEVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R T ++ + +V+L+ L+ ++R Sbjct: 287 ERWTIILGVLYIIVLLVFPKGLVGTVKRLKNMKR 320 >gi|295095497|emb|CBK84587.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 304 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 90/304 (29%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIGLALLAFFGLHSFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGWTIERIAYKPLRNSTRLAPLISAIGMSLILQNYVQLSQGPRQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + F FV ++L+ + + RT + R ++ ++K Sbjct: 129 GVPTMLDGVLRFHLGEGFVQITYTKVFILIASFAGMLVLTWIINRTRLGRMCRAVQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A G+AG + + F I + +LGG+ Sbjct: 189 MASILGINTDRIISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFVIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL GM + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAEAQFSGMVNSDYKDVFSFG-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|123443086|ref|YP_001007060.1| branched chain amino acid ABC transporter permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090047|emb|CAL12910.1| putative Branched-chain amino acid transport system, permease component [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 358 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 101/353 (28%), Gaps = 27/353 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L L+ + LL + L L Y ++ +IL Y + A L +V G GL Sbjct: 16 LSLSLAGIVTILLITLPFLALLPADNPLAISTYTLTVVGKILCYAVVAIALDLVWGYAGL 75 Query: 66 LSLNCVIAYAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSL 115 LSL + +A+G Y+ + W +P S + L + Sbjct: 76 LSLGHGLFFALGGYAMGMYLMRQAAGDGLPAFMSFLSWSELPWFWRGSQYFIWALCLIVV 135 Query: 116 KFRGDYLAIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 + ++ G + + + F Sbjct: 136 VPGLLAFIFGYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGF 195 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 S I ++ L + S + + RT +RD + KL Sbjct: 196 SVSATSTRIALFLATLALLIASLVLGFAVARTKFGRILTAVRDAENRLTFCGYDPKGFKL 255 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 + +S+ +AGA + I+P + +I V LGG +L I+ Sbjct: 256 FIWTLSAVLCALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVN 315 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 G F + + + LV L ++ L Sbjct: 316 GAKSW--------------FTIAMPEYWQFFLGLIFILVTLFLPKGVIGLLRR 354 >gi|66047655|ref|YP_237496.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] gi|63258362|gb|AAY39458.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] Length = 359 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDHFLWAMCLVVLAPGLLALIFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFLATVALLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ + Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352 >gi|87120263|ref|ZP_01076158.1| putative urea short-chain amide or branched-chain amino acid uptake ABC transporter permease protein [Marinomonas sp. MED121] gi|86164366|gb|EAQ65636.1| putative urea short-chain amide or branched-chain amino acid uptake ABC transporter permease protein [Marinomonas sp. MED121] Length = 395 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 98/350 (28%), Gaps = 33/350 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ L LL Y ++ + L Y M A + I+ G G+LSL Sbjct: 33 VISTLLACASNLLLTEDSPLYVSTYTITLLGKYLCYAMLALAVDIIWGYCGILSLGHGAF 92 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +A+G Y+ + R + LP D A L+ I Sbjct: 93 FALGGYAMGMYLMRQIGDRGVYGDPVLPDFMVFLDWKSLPWFWQGMDQFWFAILMAVVIP 152 Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174 + + + + + + + F Sbjct: 153 GLLAFIFGWLAFRSRVTGVYLSIMTQALTYALLLAFFRNEMGFGGNNGLTDFKEILGFDL 212 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + ++ + + + I +L + + IRD + + K+ Sbjct: 213 QADATRVSLFAITAFLLAVIFIISQYLMNSRMGKVILAIRDGESRARFMGYHTERYKVWL 272 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F S+ G+AGA + I+P F +I ++ V +GG +L Sbjct: 273 FVYSAIIAGIAGALYVPQVGIINPGEFSPINSIEIVIWVAVGGRGTLI------------ 320 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + +F F + LV L L+ L Sbjct: 321 --GAIIGALIINYAKTRFTALFPEAWLFALGGLFVLVTLYLPKGLMGLWE 368 >gi|332383229|gb|AEE68076.1| branched chain amino acid ABC transporter permease [Bordetella pertussis CS] Length = 320 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 15/294 (5%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y I + GL +V G G +SL A+G Y IL +R G+ ++ Sbjct: 24 PEYQLYQVSLIAATAIIVLGLVVVCGIAGQISLGQAAFVALGGYGAAILATRLGVPLYAG 83 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 IP++A G ++GL +L+ G YLA+AT+ ++ I Q +I +T G AG+ + Sbjct: 84 IPLAAAACALLGYLLGLATLRVSGHYLALATMAVTAIVQLAVINLDDLTGGAAGMPMPPL 143 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +Y V++ + LS +++ L R+ I A+ +R Sbjct: 144 EIAGHV---------------LDNGASLYLVIVPVFALSYALVRNLMRSRIGRAFGAVRQ 188 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A ++ ++ K SAFA S + G A + P + ++ + ++I ++ Sbjct: 189 GEIAAAAMGVNVLHYKASAFAASGFLGALGGGLLGALSSYLDPSQYGITQTVYYLAIAVV 248 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 GGM S +AI + + E+ G+ Y +F M + + Sbjct: 249 GGMASPLGALIGSAIFVFIPEVLQGLQSYLGLVFALLLLAFIMLRPAGLASFIV 302 >gi|307731476|ref|YP_003908700.1| inner-membrane translocator [Burkholderia sp. CCGE1003] gi|307586011|gb|ADN59409.1| inner-membrane translocator [Burkholderia sp. CCGE1003] Length = 323 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 123/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G GLLS + A Y G S L + Sbjct: 26 FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYITGYAMQTLGFSPELGVLAGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++G+ +++ +G Y A+ TL ++++ + ++ Sbjct: 86 CATVLGLVVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +Y+V+L + L+ +I+ + + I++N+ Sbjct: 132 GLQGVPRGKLFGVLDLSSDVALYFVVLTVMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVVVQGFETLSDAYWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYY-FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + S T + + +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDIGSVLAAATGVDWFRSLGESVTIVTGVIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|330873701|gb|EGH07850.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963399|gb|EGH63659.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] gi|331014669|gb|EGH94725.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 359 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVVLLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352 >gi|297626281|ref|YP_003688044.1| High-affinity branched-chain amino acid transport system permease protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922046|emb|CBL56610.1| High-affinity branched-chain amino acid transport system permease protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 294 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 102/303 (33%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G +++ G + L++ Y +GAY + + L + + V Sbjct: 8 LVNGASLGSVYALIALGYTMIYGIIQLINFAHGDVYMVGAYVGYACMAHFHLGFFTSLVV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ + K IA LI + +L G ++ Sbjct: 68 AMAVCTVLGVVIERVAYKPLRKSSRIAVLITAIGVSFLLEYTMMFFVGADVRSYPPLPHW 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + VI + L ++ L +RRT + A R + + Sbjct: 128 MQV---------SWHLGGVIITSLQVLIFAIAVALMIALQLIVRRTRLGKAMRAVSQDAD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + I+P M + +LGG+ Sbjct: 179 AARLMGINVNNTISFTFALGSALAGAAGVLVAVYYNSINPLM-GMVPGLKAFIAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L + V G F F ++ L ++++++ Sbjct: 238 GLLPGALIGGYFIGVVETFVSGTGFSTFKDA-------------VVYALLIIILVVKPSG 284 Query: 339 LLR 341 LL Sbjct: 285 LLG 287 >gi|307728867|ref|YP_003906091.1| urea ABC transporter permease UrtC [Burkholderia sp. CCGE1003] gi|307583402|gb|ADN56800.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. CCGE1003] Length = 397 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 103/354 (29%), Gaps = 37/354 (10%) Query: 11 YDKILCLLAVV-----YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + ++ L+AVV + L+ Y ++ + + Y + A L +V G G+ Sbjct: 46 WLALIVLIAVVALGVPFATLVVPETSPLHLSAYATTVAGKFMCYAIAALALDLVWGYCGI 105 Query: 66 LSLNCVIAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACG 107 LSL + +A+G Y+ + G Sbjct: 106 LSLGHALFFALGGYAIGMYLMRAIGHDGKYGSDLPDFMVFLDWHQLPWYWQGTQHLGYAL 165 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 M++ L + + +I Y + + Sbjct: 166 MLVVLVPAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFK 225 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 R FP + + + + + + + + +RD + L + Sbjct: 226 RIGGFPITHAGTRTALLLITFAVLIAAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYSP 285 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + KL + VS+ G+AGA + I+P +I + V +GG +L Sbjct: 286 LAYKLFVWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVG 345 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + G F +F + + LV L + ++ Sbjct: 346 AFAVNGAKSF--------------FTANFPEYWLFFLGLIFVLVPLFLPNGIMG 385 >gi|86158561|ref|YP_465346.1| chain amino acid ABC transporter inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85775072|gb|ABC81909.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Anaeromyxobacter dehalogenans 2CP-C] Length = 313 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 105/301 (34%), Gaps = 29/301 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + +L +FA ++++G GLLS AY+ +GL + + + Sbjct: 28 FAMNVLCLALFASAFNLLLGYTGLLSFGHAAFLGASAYATGWALRSWGLPPEVAVLLGTA 87 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 ++ A G+ G +++ G Y A+ TL +++ ++++ T G+ G+ R Sbjct: 88 LAAALGLAFGALAIRRSGIYFAMITLGFAQLVYFLVVQLPW-TGGEDGLQGIPR------ 140 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + Y+ + ++ + + R IR+N+ Sbjct: 141 -------GRALGLLPLDDPRTAYWFVYAAFLAGFWLLHRAIHSPFGHVLRAIRENEPRAV 193 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+ G+AG A S + + V+ + +LGGM ++ Sbjct: 194 SLGYDVARYKLLAFVLSAGVSGLAGGLKAVVLQFASLSDVHWHRSGEVVLMTLLGGMGTV 253 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +++ + T + ++ ++ Sbjct: 254 LGPSVGALLVVALENYLA---------------DTGSWVTVITGAVFVACVVAFRRGIVG 298 Query: 342 L 342 Sbjct: 299 E 299 >gi|111224252|ref|YP_715046.1| putative ABC transporter permease ATPase [Frankia alni ACN14a] gi|111151784|emb|CAJ63504.1| putative ABC transporter permease protein ATPase [Frankia alni ACN14a] Length = 1057 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 122/307 (39%), Gaps = 18/307 (5%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + + + + ++ + L +V G G +SL + +G + + + + + L Sbjct: 343 TSGSMRAAVVTSMLLGIVTLSLVVVTGYAGQVSLAQLTLAGVGGFLVSRMSTDWNIPFPL 402 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 ++A+ + G+++GLP+L+ RG +A+ TL + ++I + + G G VAD Sbjct: 403 APLLAALGAMIIGVVVGLPALRIRGLPVAVVTLALGMAVESIWFRNPDVNGGTGGAKVAD 462 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + + ++ + + V L + LRR+ + A +R Sbjct: 463 PKLWGLNLRIGAGENYPRIQFGLLCLVVLILVGLAVAE--------LRRSRLGAAMLAVR 514 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 N+++ + + K++AFA+ S G+ GA A + + + F + + + Sbjct: 515 ANERSAAAAGIDVARVKIAAFAIGSFIAGLGGALMAYQQTLVDAESFSVVGGLALFATAY 574 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 L G+TS+S A + G + L + + +AL L +L+ Sbjct: 575 LAGITSVSGGLLAGVLGAGGLLFV----------ALDKAVDLGSWYQVITGVALVLSVLL 624 Query: 335 RSHSLLR 341 + Sbjct: 625 NPEGAVG 631 Score = 53.7 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 88/296 (29%), Gaps = 7/296 (2%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 ++ ++ A GL + S G+++ AY+Y L L +P Sbjct: 7 FLLLGLGSGAVFGALALGLVVTYRSSGVVNFATGAIALYTAYTYAFLRRGELLLPIPGLP 66 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYV 152 + + G+ L L + ++ + + Sbjct: 67 KTVSVGSDWGLWPALGVSLVIAALLGVLLYVLVFRWLRAAPPVAKAVASIGLLIVFQALL 126 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 A R+ +V+ ++ + + + + L + L+ ++ R T A R Sbjct: 127 AQRVGTTPVSVKRILPSDNYTIGDLRIQGDKLWFALTIVVLAIALAGVFRFTRFGLATRA 186 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 + +K + L+ +A+ + G++G + I F + ++ Sbjct: 187 AAETEKGALVTGLSPDRIALANWAIGAVVAGLSGILISPIVPLIPVSYTLFIVPALAAAL 246 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 V G SL A ++ V + + + L + L Sbjct: 247 VA--GFNSLGLAVGAGLLIGMVQSELQYLQSQHSWLPQQGLGQLVPLVVILGYLVL 300 >gi|33600142|ref|NP_887702.1| branched chain amino acid ABC transporter permease [Bordetella bronchiseptica RB50] gi|33567740|emb|CAE31654.1| probable permease component of branched-chain amino acid transporter [Bordetella bronchiseptica RB50] Length = 320 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 15/294 (5%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y I + GL +V G G +SL A+G Y IL +R G+ ++ Sbjct: 24 PEYQLYQVSLIAATAIIVLGLVVVCGIAGQISLGQAAFVALGGYGAAILATRLGVPLYAG 83 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 IP++A G ++GL +L+ G YLA+AT+ ++ I Q +I +T G AG+ + Sbjct: 84 IPLAAAACALLGYLLGLATLRVSGHYLALATMAVTAIVQLAVINLDDLTGGAAGMPMPPL 143 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + +Y V++ + LS +++ L R+ I A+ +R Sbjct: 144 EIAGHV---------------LDNGASLYLVIVPVFALSYALVRNLMRSRIGRAFGAVRQ 188 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A ++ ++ K SAFA S + G A + P + ++ + ++I ++ Sbjct: 189 GEIAAAAMGVNVLHYKASAFAASGFLGALGGGLLGALSSYLDPSQYGITQTVYYLAIAVV 248 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 GGM S +AI + + E+ G+ Y +F M + + Sbjct: 249 GGMASPLGALIGSAIFVFIPEVLQGLQSYLGLVFALLLLAFIMLRPAGLASFIV 302 >gi|330960062|gb|EGH60322.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. maculicola str. ES4326] Length = 219 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 22/214 (10%) Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVL 187 +L W T G G+ V +F R + +F F + + IF+Y VL Sbjct: 1 MVLNNWLSFTGGPNGVPVPAPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVL 60 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + I L R I AW +R+++ A S+ + KLSAF + ++ G+AG Sbjct: 61 FLVVLAVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGV 120 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 FFA+ + ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 121 FFASYQGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY--- 177 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 178 ------------RVLLFGILMVLMMIWRPRGLIR 199 >gi|332161029|ref|YP_004297606.1| branched chain amino acid ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665259|gb|ADZ41903.1| branched chain amino acid ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859430|emb|CBX69775.1| hypothetical protein YEW_GJ27610 [Yersinia enterocolitica W22703] Length = 358 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 105/350 (30%), Gaps = 27/350 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L L+ + LL ++ L L Y ++ +IL Y + A L +V G GL Sbjct: 16 LSLSLAGIVTILLVILPFLALLPADNPLAISTYTLTVVGKILCYAVVAIALDLVWGYAGL 75 Query: 66 LSLNCVIAYAIGAYSYVILG----------SRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 LSL + +A+G Y+ + S W +P S ++ L + Sbjct: 76 LSLGHGLFFALGGYAMGMYLMRQAAGDGLPSFMSFLSWSELPWFWSGSQYFIWVLCLIVV 135 Query: 116 KFRGDYLAIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 + ++ G + + + F Sbjct: 136 VPGLLAFIFGYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGF 195 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 S I ++ L + S ++ + R+ +RD + KL Sbjct: 196 SVSATSTRIALFLATLALLIASLALGFAVARSKFGRILTAVRDAENRLTFCGYDPKGFKL 255 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 + +S+ +AGA + I+P + +I V LGG +L I+ Sbjct: 256 FIWTLSAVLCALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVN 315 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G F + + + LV L ++ L Sbjct: 316 GAKSW--------------FTMAMPEYWQFFLGLIFILVTLFLPKGVIGL 351 >gi|299134319|ref|ZP_07027512.1| inner-membrane translocator [Afipia sp. 1NLS2] gi|298591066|gb|EFI51268.1| inner-membrane translocator [Afipia sp. 1NLS2] Length = 307 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 111/301 (36%), Gaps = 25/301 (8%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ + +LIY + G +++ G GLLS + GAY I +GL + + + Sbjct: 23 ALAVNVLIYGVVCVGYNLLFGYTGLLSFGHAAFFGAGAYITGIAIVHFGLPWYAAVVLGV 82 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + G +++G S++ RG Y A+ TL ++++ + ++ T G+ G+ Sbjct: 83 LGGGLLALVIGALSIRTRGIYFAMVTLALAQLVYYVALQASNWTGGENGLRG-------- 134 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + + YYVL+ L+ + + + IR+N+ Sbjct: 135 --FTVSKIDLFGLQINFLDPLQKYYVLMAFAGLALWFVSRILNSPFGAVIEAIRENETRA 192 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + AKL +F +S +AG A + D + + +++ + +LGG S Sbjct: 193 RACGYNVERAKLMSFTLSGLICALAGTLSAMHLAIVPLDSLHYQTSGMIVMMTLLGGAGS 252 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + ++ ++ ++ L +L + Sbjct: 253 FFGPFVGALAFLLMEDVFSIWTSHW---------------QIVVGSVFILFVLFLPKGIW 297 Query: 341 R 341 Sbjct: 298 G 298 >gi|296157552|ref|ZP_06840387.1| inner-membrane translocator [Burkholderia sp. Ch1-1] gi|295892324|gb|EFG72107.1| inner-membrane translocator [Burkholderia sp. Ch1-1] Length = 323 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 123/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G GLLS + A Y G S L + Sbjct: 26 FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYVTGYAMQTLGFSPELGVLAGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+I+G+ +++ +G Y A+ TL ++++ + ++ Sbjct: 86 AATLLGLIVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + + +Y+V+L + L+ +I+ + + I++N+ Sbjct: 132 GLQGVPRGKLFGVLDLSSDTALYFVVLAVMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + + ++ + +VI + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGIAGLAGSLKVLVQGFETLSDAYWTMSGLVILMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNS-LLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + +S +++ S T + + +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDFGAALASSTGVEWFRSLGESVTIVTGVIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|297567643|ref|YP_003686614.1| hypothetical protein Mesil_3292 [Meiothermus silvanus DSM 9946] gi|296852092|gb|ADH65106.1| hypothetical protein Mesil_3292 [Meiothermus silvanus DSM 9946] Length = 301 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 108/307 (35%), Gaps = 19/307 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A GLSI+ L L + IGA++ + G+S + V Sbjct: 11 LINALSVGSLYALVAVGLSIIFSLLRLTNFAHGDMMMIGAFAT-LFAQLAGMSFLAAVGV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++S G+I+ + + + L+ S IL + + + Sbjct: 70 GILVSALAGVIIERVAYRPVRGAPDVTMLLTSVALTYILENLGILLFSSSPRNFPLPEWM 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + R + + + + + + ++RRT + R ++ Sbjct: 130 NHLYRFADGRITFNNINLLTLGVTLLAL--------LFLNWFVRRTRVGLGMRAAAEDLT 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + AF ++SAF G+AG +AA + P M F+ + I+GG Sbjct: 182 AAHLVGLDVNQVIVVAFVLASAFAGVAGVLWAAQAGVVEPQM-GFTPLLKAFVAAIIGGF 240 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L G+ L + + + L+ L +L R Sbjct: 241 GSIPGAIVGGFVLGGLEVLIQSLPGQW---------GLSSYRDALVFALLIAFLLFRPGG 291 Query: 339 LLRLRTP 345 +L +R Sbjct: 292 ILGVRQE 298 >gi|29832709|ref|NP_827343.1| branched-chain amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29609829|dbj|BAC73878.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 393 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 129/327 (39%), Gaps = 7/327 (2%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ + L + + +G+ + + A GL+++ G+ G LSL A+GA Sbjct: 5 LVMAGAAVLLCVLPFYLGAFWLQVGLFSMAAALGAVGLTLLTGTAGQLSLGHAFFLAVGA 64 Query: 79 YSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 Y YV L GL L + ++ +SG G + + + RG YL +ATL + + ++ Sbjct: 65 YGYVWLAGDPGPGLPPLLALVLAVCLSGLVGGLFSPVAGRVRGVYLGVATLALVFLGHHV 124 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ IT G G + G T + E ++Y+ L + + Sbjct: 125 MLNADSITGGFNGRS-VPPMSLGGFTFTASDPQLTVLGVPFGAEERLWYLALILLAVGWF 183 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L A +RD++ A + + + +AF VSS + G+AG A RI Sbjct: 184 AARNLLNGRPGLALTALRDSETAAAVMGVPVARRRSAAFVVSSMYAGLAGVLLALVFRRI 243 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKF 312 PD F + +I ++++++GG+ S++ A + + L Sbjct: 244 VPDYFGLALSIDYLAMIVIGGLGSVAGAAAGAVFVTALPLLMARYADQLPLVAAPGAAGH 303 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSL 339 L A+ LV+L L Sbjct: 304 AVGPTEASRYLYGAAIVLVLLFAPDGL 330 >gi|28872002|ref|NP_794621.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28855255|gb|AAO58316.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 359 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVVLLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352 >gi|71733664|ref|YP_276587.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|289625274|ref|ZP_06458228.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647800|ref|ZP_06479143.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|71554217|gb|AAZ33428.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322766|gb|EFW78859.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|330867109|gb|EGH01818.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330870997|gb|EGH05706.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 359 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVLLLIASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352 >gi|83950516|ref|ZP_00959249.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83838415|gb|EAP77711.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 322 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 66/323 (20%), Positives = 119/323 (36%), Gaps = 31/323 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + L L + Y+ + I+I+ + A G + V+G+LG L+ + +GAY Sbjct: 15 FWAVPLLLLALPLVTNAYVQFIANSIVIFALVALGFNFVIGNLGQLAFANTALFGLGAYG 74 Query: 81 YVILGSRYGLSIWLLIP-VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 IL + +GL + IP + + R YLAI TL E+ + + + Sbjct: 75 SAILVNSFGLPWIVSIPLAGVAGAAGGFLASAAALRGIRLYYLAIITLAFGELMRWLYVH 134 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 K +T G G+ + + + +Y+ L + L L Sbjct: 135 GKSVTGGTDGMGLPA---------------QSLFGFSLTDDRAKFYIFLVVAVLLFKATL 179 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + R+ + + +R+N+ A SL + AF S +G AGA FA + P+ Sbjct: 180 NILRSRVGRSVMAVRENEVATASLGIPTARIIVFAFMWSGFVVGCAGALFALHTSYVFPE 239 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F I+ ++V++GG+ S+ A L + E Sbjct: 240 SFGMLHLIVSFAMVLVGGLGSVIGAVLGAAALTILPEYLRSF---------------PGM 284 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 + + V+L L L Sbjct: 285 EELFFGLIVIAVLLALPDGLASL 307 >gi|91785752|ref|YP_560958.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91689706|gb|ABE32906.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 323 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 124/302 (41%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G GLLS + A Y G S L + Sbjct: 26 FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYVTGYAMQTLGFSPELGVLAGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+I+G+ +++ +G Y A+ TL ++++ + ++ Sbjct: 86 AATLLGLIVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +Y+V+L + L+ +I+ + + I++N+ Sbjct: 132 GLQGVPRGKLFGVLDLSSDVALYFVVLAVMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + + ++ + +VI + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGIAGLAGSLKVLVQGFETLSDAYWTMSGLVILMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNS-LLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + +S +++ S T + I +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDFGAALASSTGVEWFRSLGESVTIVTGIIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|241764226|ref|ZP_04762259.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241366445|gb|EER60956.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 358 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 78/345 (22%), Positives = 138/345 (40%), Gaps = 23/345 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 +IF + ++ + + + FL + S ++ I +I + A G++I+VG Sbjct: 18 AIFPIAQDR------IAIALMLAVAFLVVPMLASDYIFRAILIPFVIMALAALGVNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY R + + + + + G++ GLPSL+ +G Sbjct: 72 YCGQISLGSGAFMAVGAYGAYNFFVRIPGLPLIPALILGGLCATFFGILFGLPSLRVKGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL + ++ K TN V + + + Sbjct: 132 YLAVATLAAQFFSDWMFLRIKWFTNNSDSGSV-------------SVNGLQVFGMPIESA 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 Y L + + A + L R AI W IRD A + ++AKLSAFAVSS Sbjct: 179 TSKYIFCLAVLVVVALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 IGMAGA +A P F + ++ +VI+GG+ S+ A ++ + + Sbjct: 239 IIGMAGALWAFVHLGAWEPAAFSVEVSFRLLFMVIIGGLGSIMGGFFGAAFIVVLPIVLN 298 Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342 + + + H + + +++ H L +L Sbjct: 299 QFLPALMGMVGIEISTAGVSHAELMIFGALIVWFLIVEPHGLAKL 343 >gi|46205037|ref|ZP_00049132.2| COG4177: ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 378 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 122/288 (42%), Gaps = 29/288 (10%) Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 +V+G+ G+ SL AY L + GL W+L V A+I G+++ LP+L+ Sbjct: 1 MLVIGTAGIYSLASYAIVGAAAYGATYLAVQLGLPWWVLPAVGAVIGFLFGLLIALPALR 60 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 G Y A+ TL + E+ + +I+ + + GIY A G + + Sbjct: 61 LDGFYYALLTLGVVELCRVYVIQSRTFGSATGGIYGAPSYLPEGLSQSGQL--------- 111 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN-TTIIFAKLSAF 235 ++ YY L + + + ++ + R + ++AF + A++S F Sbjct: 112 ----LWGYYASLIVMVCALFLYRFVNGKRLGRVLRMAPEKKEAFAQACGVDYLRARISVF 167 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +SS IG G F+A+ SP++F F ++ ++++++GG+ TAI++ + Sbjct: 168 MISSTAIGAVGGFYASHFGGASPNLFSFDTLLLALAMLVIGGIGRSEGAVTGTAIVVFID 227 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L+ + + LV+L L ++ Sbjct: 228 RVM---------------IDWGPLRFVLIGMIMLLVVLFLRGGLFGIK 260 >gi|327399761|ref|YP_004340630.1| ABC transporter integral membrane subunit [Hippea maritima DSM 10411] gi|327182390|gb|AEA34571.1| ABC-type transporter, integral membrane subunit [Hippea maritima DSM 10411] Length = 291 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 71/308 (23%), Positives = 136/308 (44%), Gaps = 31/308 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ ++ I + IY++ A L+I+VG G +SL +AIGAYS+ IL ++YGL Sbjct: 2 SGYLVTLAITVGIYMILALSLNIIVGYAGQISLGHAAFWAIGAYSFAILTTKYGLGFIES 61 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 ++ +I+ G+ +GLPSL+ D+LAI T+ ++ I Q I G GI Sbjct: 62 SVLAVIITTLVGIFLGLPSLRVSEDFLAITTIGINFIVQGIF-NSSDYFGGAMGIGGIPF 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 F G + + ++ G ++ +R+ A I+D Sbjct: 121 PTFKGEMISNTA---------------FMLMVYGFVAITIVASYMFKRSWAGLASFAIKD 165 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + + KL +FA+ SA G++G +A+ IS F F ++ ++++V++ Sbjct: 166 DELAASVNSVSPVRFKLLSFAIGSAIAGISGVLYASFMSFISAADFSFPVSVTILAMVMV 225 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ + +L+ + E+ ++ Y L + L ++ + Sbjct: 226 GGEATIIGPIFGSVLLVILPEIFRFIHDY---------------RMLLYGLLLVFMMRFQ 270 Query: 336 SHSLLRLR 343 R Sbjct: 271 PDGFFGKR 278 >gi|86750275|ref|YP_486771.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86573303|gb|ABD07860.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 324 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 116/341 (34%), Gaps = 32/341 (9%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + + ++A ++ + T + +Q L + + A ++++G Sbjct: 7 NSVPAPTTRRPVRDEMIAFALMTIVLAVVPFTGVYPFFV---MQGLCFALLACAFNLLIG 63 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 GLLS + Y + L L I + + +I GL +++ +G Y Sbjct: 64 YGGLLSFGHAMFLGTAGYVSAHALKVWELPPELGIVAGVVAAFGLSVITGLIAIRRQGIY 123 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 A+ TL +S++ I ++ ++ + + F + + Sbjct: 124 FAMITLALSQLLYFIYLQA--------------PFTHGEDGIQGIPQGKMFGIIDLQHTT 169 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +Y+V+L + II + + IR+N+ SL KL AF +S Sbjct: 170 TLYFVILIGFLIGFLIIYRAINSPFGEVLKAIRENEPRAISLGYKTDQYKLLAFILSGTL 229 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G AGA S +S + ++ + ++GG+ ++ ++I + + G Sbjct: 230 AGFAGALKVFVAQNASLTDVHWSMSGEIVLMTLVGGLGTIFGPVVGAFVIIAMQQYLAGF 289 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 290 ---------------GQWVTVIQGVIFVACVLTFRRGIVGE 315 >gi|84683570|ref|ZP_01011473.1| probable transmembrane abc transporter protein [Maritimibacter alkaliphilus HTCC2654] gi|84668313|gb|EAQ14780.1| probable transmembrane abc transporter protein [Rhodobacterales bacterium HTCC2654] Length = 339 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 124/329 (37%), Gaps = 26/329 (7%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 + L + +G ++G +L+ +FA L +V+G G+++L + + +GAY Sbjct: 19 LVPLIVAIGCYYLFPGYLTLGAAVLVMAIFAVSLDLVIGYAGIVTLGHSVFFGVGAYGAA 78 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 L + ++ ++ ++ G L+ + L + T+ ++ I K Sbjct: 79 KLSIAGIDTPIAAALIAGAMASLLAVLTGPFVLRLKHLPLIMVTVAIAAIAHEAANKMSW 138 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ LG S+ Y +L L I + Sbjct: 139 LTGGHDGLPNLTFEPVLGLFKWSIW------------GTTSYLYVLAWLVLLVIISRIVV 186 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ A + IR N+ + ++ ++ + S+ G+AGA +A + + +S + Sbjct: 187 SSSFGMALQGIRQNELRMRVMGAPVLKQQVIIYTYSAFLAGIAGALYAQTNNFVSLETLT 246 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + +++++LGG+ + A+ + V L + Y++ Sbjct: 247 VDLGVFALAMIVLGGLGRIYGAIIGAAVYMIVQYLAQQWDPYFW--------------ML 292 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + L LV+ LL + + R Sbjct: 293 AIGVLLVLVVRFGKGGLLGIAEKAWLRVR 321 >gi|115525737|ref|YP_782648.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115519684|gb|ABJ07668.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 390 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 107/353 (30%), Gaps = 36/353 (10%) Query: 13 KILCLLAVVYPLLLFLFLGATKS----QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 +L + A+ L LF L S Y+ ++ + + Y + A + ++ G G+LSL Sbjct: 17 FVLVVAAIGVALPLFNLLLPEGSTLHVPTYLLALFGKYVCYALLALSIDLIWGYCGILSL 76 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +A+G Y+ + R S + LP + D A L+ Sbjct: 77 GHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLNYKALPWYWYGFDMFWFAALM 136 Query: 129 MSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRF 169 + + + + + + D + + Sbjct: 137 VLVVPGLLAFGFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNGLTDFKDI 196 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 F ++ + + I + + + IRD + L + Sbjct: 197 LGFNVQADGTRAALFALSCLALIVGFLICRAVVTSKLGKVLIAIRDAESRTRFLGYRVES 256 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL F +S+ G+AGA + I+P F + +I + V +GG +L A Sbjct: 257 YKLFVFTLSACMAGVAGALYVPQVGIINPGEFAPANSIEAVIWVAVGGRGTLIGAALGAV 316 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + ++ LV L+ ++ Sbjct: 317 VVNYAKTVFTS-------------GPLAPYWLFMLGALFVLVTLLLPKGIVGT 356 >gi|299532791|ref|ZP_07046178.1| membrane protein [Comamonas testosteroni S44] gi|298719015|gb|EFI59985.1| membrane protein [Comamonas testosteroni S44] Length = 402 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 100/351 (28%), Gaps = 33/351 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + L L +V + L L A Y+ + + + Y + A + ++ G G+ Sbjct: 22 WTAFLLALTMVCAVAPALNLWVPEDSALHLSDYMLGLLGKFMCYAICALAIDLIWGYTGI 81 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSI-----------WLLIPVSAMISGACGMIMGLPS 114 LSL + +A+G Y + R W +P +SG+ + L Sbjct: 82 LSLGHGLFFALGGYVMGMYLMREAAGPDALPAFMGFLDWKELPWHWALSGSFAATVLLVF 141 Query: 115 LKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 L +I + + + Sbjct: 142 LVPGLIGGLFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTGFKTLLG 201 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + + ++ + WL R+ + +RD + + K Sbjct: 202 FSVNSQAMHVLLFALSGLALLGCFLFSRWLMRSKYGRVLQAVRDAESRTMFCGYNPLPYK 261 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 LS + +S G+AGA + I+P +I + +GG SL + Sbjct: 262 LSIWVISVMMCGLAGALYVPQVGIINPSEMSVGNSIEMAVWTAVGGRASLVGPIIGAFAV 321 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G + ++ +V L L+RL Sbjct: 322 NGGKSWLT--------------VAAPEYWLYVLGALFIVVTLFMPGGLIRL 358 >gi|295109214|emb|CBL23167.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Ruminococcus obeum A2-162] Length = 294 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 102/306 (33%), Gaps = 24/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ IY + A G ++V G +L+ +GAY + +R G+S L + Sbjct: 5 SYLKDGISLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVILTAVTRGGMSPVLAV 64 Query: 97 PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +S + GM++ + R +A LI + +L + G Sbjct: 65 ALSVIFCTVLGMVIEKVAYSPLRKASSNLAVLITAIGVSYLLQNLALLIFGADAKSFVTV 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + ++ ++ + +L + A ++L++++T A + + + Sbjct: 125 IDVPSVSLFD---------GQLVIKGITIVTILSCIVIMAGLMLFVQKTKPGRAMQAVSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + FA+ S +AG + ++P I + Sbjct: 176 DRDAAQLMGVNVNATISMTFAIGSGLAAIAGLLLCQTYPTLTPYT-GAMPGIKAFVAAVF 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ +L + + F L +V+L++ Sbjct: 235 GGIGSIPGAMVGGILLGVIEIFGKAYISSQVADAICF-------------AVLIVVLLVK 281 Query: 336 SHSLLR 341 L Sbjct: 282 PTGLFG 287 >gi|296102371|ref|YP_003612517.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056830|gb|ADF61568.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 524 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 84/288 (29%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ + + +++ + Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYATWMVQQIMASVTPQWLALYPVVALPVAFCLTAGIGMI 310 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + + Sbjct: 311 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPAWLSGGVQVFANL 368 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 VL + + L L +T + R + N+ + AF + Sbjct: 369 TLPWNRIVVLGFVLMVLFFTWLVLNKTRLGLNVRAVTQNRSMAACCGVPTGRVDMLAFGL 428 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L ++ Sbjct: 429 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 486 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++++A+ L I R L L+ Sbjct: 487 LEPQMGAVLGK-------------IVILVAIILFIQKRPQGLFALKGR 521 >gi|222086386|ref|YP_002544920.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723834|gb|ACM26990.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 349 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 109/310 (35%), Gaps = 15/310 (4%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + +L + + L +Q + +I+ + + A + +++G G++SL Sbjct: 20 RRSARWSVLELAFWALAVTSWFLFPNQH---LILTEIVGFAILALSIDLMLGYAGIVSLG 76 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 Y +GAY+ + + V A+ + L+ + TL + Sbjct: 77 QAAMYGVGAYASGLFSIHVTGEPLSGLVVGALSGTVVAFLTSFLLLRGGDLTRLMVTLGV 136 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + +F I + +T G G+ G + + S + + L Sbjct: 137 AAVFAEIANQANWLTGGADGLQGITINPLFGVFDFDIYGHTGYAYSLAVLFVLFLLARLI 196 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + + + IRDN ++ + ++ + +S A+ G+AGA F Sbjct: 197 VS------------SPFGYSLKAIRDNPLRASAVGVPVNARLVAIYTLSGAYAGIAGALF 244 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A ++ IS D F ++ + I+++GG L + + + + Y+ Sbjct: 245 AQTQQFISLDALSFQKSADGLMILVIGGTGYLYGGIIGALVYELIQDGLSSLTPQYWQFW 304 Query: 310 LKFDCSFNMR 319 L + Sbjct: 305 LGMLLVAFVL 314 >gi|291296498|ref|YP_003507896.1| inner-membrane translocator [Meiothermus ruber DSM 1279] gi|290471457|gb|ADD28876.1| inner-membrane translocator [Meiothermus ruber DSM 1279] Length = 304 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 133/327 (40%), Gaps = 32/327 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ LL F + A ++ + +I+I+ + A L++++G G++S + +GA Sbjct: 8 VLLGLLLAFPPIAAAMGLEFYQGLLTKIMIFALAASSLNLILGYGGMVSFGHAAYFGLGA 67 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL S W++ V+ +S +++G SL+ RG Y + TL +++ +++ Sbjct: 68 YTVAILMREGVTSGWVIWAVAVGLSALLALLIGAISLRTRGIYFIMITLAFAQMIYYLVV 127 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +K L F + + +YY+ LG+ + ++ Sbjct: 128 SFKQYGG-----------------EDGLRARRPEFGLFELNDTTLYYLTLGVLLAALYLL 170 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + + IR+N+ +L + +L AF ++ A G+AG A SP Sbjct: 171 YRLVHSRFGRVLQAIRENEARALALGYPVFHFQLVAFVLAGALAGLAGVLMAHYTQYASP 230 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 ++ + ++ ++ +VILGG+ +L V E+ + ++ Sbjct: 231 NLLAWQQSGHLMMMVILGGVGQFWGGVLGALVLSLVEEILQDLTIHWQLG---------- 280 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 + + L ++L L L Sbjct: 281 -----VGLILLFIVLFAPKGLAGLMRR 302 >gi|89899880|ref|YP_522351.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89344617|gb|ABD68820.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 333 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 129/346 (37%), Gaps = 35/346 (10%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + K+ +I + ++ L+ + +++L + +FA ++++G GL Sbjct: 15 TKAAKFLRITYIALLILALVAPMIGLYPV-------FVMKLLCFALFACAFNLLLGFTGL 67 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LS + AY L + + L I + SG G+++G +++ +G Y A+ Sbjct: 68 LSFGHAAFFGSAAYITGYLIKSHNFTPELGIVAGMIGSGLIGLVVGYVAIRRQGIYFAMI 127 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++++ + ++ ++ + R F + + MYY Sbjct: 128 TLALAQMVYFVCLQ--------------APFTGGEDGLQGVPRGALFGLLSLQSDTAMYY 173 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +++ + + + + + IR+N+ SL + KL AF +S+A G+A Sbjct: 174 LVVAVFVAGFLAVSRIVHSPFGQVLKMIRENEPRAISLGYQVDRYKLMAFVLSAALAGLA 233 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G+ + ++ + VI + +LGG+ + I+I + + + Sbjct: 234 GSLKTLIMGFATLSDVHWTMSGEVILMTLLGGVGTFFGPVMGAGIVISLQDTLADKVGSW 293 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 N ++ + L +L ++ R Sbjct: 294 VN--------------VIIGVIFVLCVLAFRKGVVGELQAWLERRR 325 >gi|311103676|ref|YP_003976529.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310758365|gb|ADP13814.1| inner-membrane translocator 5 [Achromobacter xylosoxidans A8] Length = 326 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 118/307 (38%), Gaps = 19/307 (6%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 ++ + + LIY + A L +V+G ++S + + +G Y+ I+ + + Sbjct: 30 GSPFLIGVVTRFLIYGLAAVSLDLVIGYGAMVSFGHAMFFGLGGYAVGIIAFHTAEAGPI 89 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 + + I + + +A F I + + + + Sbjct: 90 FGWAGSNAALVVWPIALIVCALAGWLFGYLALRTRGVQFIMITLAFGQMVY----FVLVS 145 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 ++ G + + P + + YYV L + L + + + + + +R Sbjct: 146 LQFYGGDDGLMIPQRNELPGINLESPMVFYYVCLALLTLWTLLCIRVTNSRFGMVLQALR 205 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 +++ +L +LSAF +S+ G+AG +A ++PDM ++++ +++IVI Sbjct: 206 QSERRSINLGVAPTPYRLSAFVLSAMGTGLAGVLWANYAGLVTPDMAAWTKSGELMAIVI 265 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 LGG+ +L A+ +G+ ++ + ++ M L LV+L Sbjct: 266 LGGVGTLLGPIAGAAVFLGLEQMLSSLTEHW---------------LLYMGPILVLVVLW 310 Query: 335 RSHSLLR 341 L Sbjct: 311 GEKGLFG 317 >gi|301629568|ref|XP_002943910.1| PREDICTED: putative ribose/galactose/methyl galactoside import ATP-binding protein-like [Xenopus (Silurana) tropicalis] Length = 929 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 65/218 (29%), Gaps = 21/218 (9%) Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 L W + G R + + + +RF S ++ ++ Sbjct: 1 MSIFLQNWVALGQGA-------RDMAVPSLLPGALRFGAEDSFEIVVPYSRVLIIAVTVV 53 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L ++ L+++ + + A R + L F + + + G A + Sbjct: 54 LMIALTLYIKHSRMGRASRACSQDMHMAGLLGIDTHRVISFTFILGAMLAAVGGVLIALA 113 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 +++ F I + +LGG+ S+ +L + ++ F Sbjct: 114 VGKLN-PFIGFIVGIKAFTAAVLGGIGSIPGAMLGGVLLGVAETFAAAYISSEYKDIVAF 172 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L L++L+R LL L Sbjct: 173 G-------------LLVLILLVRPTGLLGKPEVEKMLR 197 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 46/88 (52%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + + +IYVM GL++VVG GLL L V YA+GAY+Y +L G Sbjct: 237 WPFFAGRNAVDIATLAMIYVMLGLGLNVVVGFAGLLDLGFVGFYAVGAYTYALLFHWAGW 296 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFR 118 S W +P++ + G ++G P L+ R Sbjct: 297 SFWQALPLAGTAAALFGFVLGFPVLRLR 324 >gi|30020070|ref|NP_831701.1| branched chain amino acid ABC transporter permease [Bacillus cereus ATCC 14579] gi|229144573|ref|ZP_04272976.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus BDRD-ST24] gi|296502554|ref|YP_003664254.1| branched chain amino acid ABC transporter permease [Bacillus thuringiensis BMB171] gi|29895620|gb|AAP08902.1| Branched-chain amino acid transport system permease protein livM [Bacillus cereus ATCC 14579] gi|228638986|gb|EEK95413.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus BDRD-ST24] gi|296323606|gb|ADH06534.1| branched chain amino acid ABC transporter permease [Bacillus thuringiensis BMB171] Length = 333 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 128/325 (39%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + + I + ++S I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T ++ + +V+L+ L+ Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311 >gi|294341960|emb|CAZ90389.1| putative ABC-type branched-chain amino acid transport system, permease component [Thiomonas sp. 3As] Length = 311 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 133/325 (40%), Gaps = 30/325 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + L + + +Y + A IV+G G+ + + + +GAY Sbjct: 13 LGAALWAIGLAIPLVLDQTWVFIAALFAVYAIVALSQDIVLGRAGMFDMGHAVYFGVGAY 72 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-I 138 IL + + I+ PV+ +++G G ++ P +K RGDYL +AT+ + IF L Sbjct: 73 VTSILNTHFNWPIFATWPVAILVAGLVGAVLAAPIVKLRGDYLLVATIGFNAIFVLALRN 132 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G GI+ G ++ S +++ + +I Sbjct: 133 NLGHLTGGSDGIFGIGVPSLFGFSLSSQN--------------AQFWLDWLAFAVILLLI 178 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ + + ++ +Q A ++ ++ AFA+ +A G AG FA +SP Sbjct: 179 RNLDRSHLGRVFYYLKHDQLAATTMGVDARAYRVLAFALGAALAGFAGTLFATLMAAVSP 238 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F F+E++ + +IV++GG S+ + T ++ V ++ Y Sbjct: 239 GAFVFTESVTLFAIVLVGGQGSIPGVLLGTVLMFVVPQIFRSFAEY-------------- 284 Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343 + IA+ +V+++R + R Sbjct: 285 -RYFIFGIAMVVVMVLRPQGIWPRR 308 >gi|228952335|ref|ZP_04114423.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807331|gb|EEM53862.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 298 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 121/304 (39%), Gaps = 31/304 (10%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98 M QI I+ +FA +++G G++S + + IGAY +L R + + I Sbjct: 1 MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++S I+GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 YYV L ++ +++I + I N++ Sbjct: 121 RDRF-------------------TFYYVSLVCLCFIFILLRLFTKSSIGKVLKAISQNEQ 161 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L ++ K+ A V+ ++G F + ++ +F + + + ++GG+ Sbjct: 162 RVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L + I+ + + Y R T ++ + +V+L+ Sbjct: 222 GTLIGAIAGSGIIESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKG 272 Query: 339 LLRL 342 L+ Sbjct: 273 LVGT 276 >gi|326693763|ref|ZP_08230768.1| branched chain amino acid ABC transporter permease [Leuconostoc argentinum KCTC 3773] Length = 292 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 103/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GAY L+ ++ + + Sbjct: 8 LLNGVILGSVYALLALGYTMVYGIIKLINFAHGDVYMLGAYFGYFFIKILHLNFFVALIL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++S G+++ L + + IA LI + +L G Sbjct: 68 SMIVSAGVGVLIELIAYRPLRHSPRIAVLISALGVSFLLENGMSYAVGSD---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I ++ + ++ L ++ L +++T + A R + +Q+ Sbjct: 118 -KRAFPQAIATVQYHVGQLQISNIQLLIIGTAVILMLALTLIVQKTKMGRAMRAVSADQE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G + I P M + I +LG + Sbjct: 177 AAVLMGINVNRTISFTFAIGSALAAAGGVLIGLYYNNIDPLM-GMTPGIKAFVAAVLGAI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + ++ + L + + ++ L L++L + Sbjct: 236 GIIPGAVLGGWLIGILETLTQAVG-------------LSDYKDAVVYGILILILLWKPTG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|220912001|ref|YP_002487310.1| inner-membrane translocator [Arthrobacter chlorophenolicus A6] gi|219858879|gb|ACL39221.1| inner-membrane translocator [Arthrobacter chlorophenolicus A6] Length = 322 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 122/307 (39%), Gaps = 6/307 (1%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 Y M A GL++ G GLL+ A+GAY + I +G+ ++ + ++ S Sbjct: 18 TTAAYAMAALGLAVHFGYSGLLNFGQAGFMAVGAYGFAISTLTFGVPFFVGLLIAIAASA 77 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 +++G+P+L+ R DYLAI T+ +EI + I+ + + +A Sbjct: 78 VFALLLGIPTLRLRADYLAIVTIAAAEIVRYIVTTNQLTAVTGSANGLAAFEGSFYAMNP 137 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + ++ + + + L+ +C ++ R+ + IR+++ A SL Sbjct: 138 FPEGSYFGMNNRDFFIRVVGWALVAICCTLVWLL---MRSPWGRVLKGIREDENAVRSLG 194 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + K+ A + +AG F R + P + + + ++LGG+ ++ Sbjct: 195 KNVYAYKMQALVIGGVLGALAGMIFTLPRGAVQPANYGTELTFFLYTCLLLGGLGTVLGP 254 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMRSHSLLR 341 I V+ L G+ + S L+ +AL L+++ R + Sbjct: 255 VIGAMIFWVVLSLTQGILYGLIESGAVTWLNTVQAGQLRYILVGVALMLLMIFRPQGVFG 314 Query: 342 LRTPSNF 348 + F Sbjct: 315 NKKELAF 321 >gi|288930484|ref|YP_003434544.1| inner-membrane translocator [Ferroglobus placidus DSM 10642] gi|288892732|gb|ADC64269.1| inner-membrane translocator [Ferroglobus placidus DSM 10642] Length = 335 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 110/302 (36%), Gaps = 37/302 (12%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y + L + + A + +GL+SL + + IGAY+ L + + L I++ IP Sbjct: 54 YYLRVLNIALSFAILAASWDFLANYVGLVSLGHALFFGIGAYTAGALSAYFDLPIFVTIP 113 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ + GA + P+LK RG Y ++ TL + LI+ I G GI + Sbjct: 114 LATLAGGAISTALIYPTLKVRGIYFSLITLAFPLLLAR-LIEATDILGGTLGITDVEGFP 172 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 Y+L+ + + L + R I+DN Sbjct: 173 NPWIES---------------------YLLIFSLIVVVFGLRRLLGEDLGIVLRAIKDND 211 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + + + A +SSA GA+ A S + +I I+ ++GG Sbjct: 212 LTVEASGINVNKYRAVAVFISSAIASFVGAYTAHSYMFVGLPYLNLEYSIFPIAATVVGG 271 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 M+S++ A +L+ + E+ + + L L I +R Sbjct: 272 MSSIAGAAIGAFVLVPLSEMLREF---------------GTLRIAIYSLLLMLFIALRPE 316 Query: 338 SL 339 + Sbjct: 317 GI 318 >gi|146279301|ref|YP_001169459.1| ABC transporter related [Rhodobacter sphaeroides ATCC 17025] gi|145557542|gb|ABP72154.1| ABC transporter related [Rhodobacter sphaeroides ATCC 17025] Length = 313 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 120/326 (36%), Gaps = 29/326 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + ++ LL + A + ++ + + LI+ + A L +++G ++S Sbjct: 9 VMAGLLLLLLPMPAVFAALGEPFLTVVLTRALIFAIAALSLDLILGFGAMVSFGHAAYLG 68 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY+ IL + + +PV+ + +G ++ G SL+ RG + + TL ++ Sbjct: 69 IGAYAAGILAANGITGLEWQMPVALVAAGIFALVTGAISLRTRGVHFIMITLAFGQMAYF 128 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ + R F + + +Y +L + Sbjct: 129 LMSSLSAYGG--------------DDGMTLAARSTLFGAEPFNGTLRFFYTVLALLAALW 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + + R+ R+N+ ++ + +L+A+A+S +AG A Sbjct: 175 LGLRAVTRSRFGRVLAGTRENETRMQAIGFSPFAYRLTAYALSGMIAALAGVLLANHAAF 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +SP ++ + +I++V+LGGM +L+ I E ++ Sbjct: 235 VSPSYMGWARSGEMIAMVVLGGMGTLTGPVLGALAFILSEEALARFTTHW---------- 284 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 A+ L +L LL Sbjct: 285 -----RLPFGAAVVLAVLFTRGGLLG 305 >gi|171462842|ref|YP_001796955.1| inner-membrane translocator [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192380|gb|ACB43341.1| inner-membrane translocator [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 309 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 62/323 (19%), Positives = 128/323 (39%), Gaps = 29/323 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++Y +L+ + L +++L + +FA ++++G GLLS + AY Sbjct: 7 LLYGILVLIGLLLPFQDCIYLVFAMKVLCFALFACAFNLLLGFTGLLSFGHAAFFGTAAY 66 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 L G S L I + SG G ++GL +++ +G Y A+ TL +S++ + ++ Sbjct: 67 ITAYLCKEAGFSPELGIVLGVAGSGVFGFLIGLLAIRRQGIYFAMVTLALSQMVYFLAVQ 126 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G+ GI R F + ++ MYY +L + ++I+ Sbjct: 127 LP-FTGGEDGIQGVPR-------------GMLFGFIGLKDDVAMYYFVLTVFLFGFALIM 172 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + IR+N+ SL + KL +F +S+A G+AG+ + + Sbjct: 173 RAVHSPFGQVLKAIRENEPRAISLGYDVDRFKLMSFVISAALSGLAGSMKSLVFQLATLT 232 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + V+ + +LGGM ++ I++G+ + Sbjct: 233 DAHWHMSGEVVLMTLLGGMGTIFGPVVGAGIVVGLQNYLANI---------------GSW 277 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 T + +L+ ++ Sbjct: 278 STIATGFIFVICVLVFRRGVVGE 300 >gi|228907678|ref|ZP_04071535.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis IBL 200] gi|228852170|gb|EEM96967.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis IBL 200] Length = 298 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 121/304 (39%), Gaps = 31/304 (10%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98 M QI I+ +FA +++G G++S + + IGAY +L R + + I Sbjct: 1 MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++S I+GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 YYV L ++ +++I + I N++ Sbjct: 121 RDRF-------------------TFYYVSLVCLLFIFILLRLFTKSSIGKVLKAISQNEQ 161 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L ++ K+ A V+ ++G F + ++ +F + + + ++GG+ Sbjct: 162 RVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L + I+ + + Y R T ++ + +V+L+ Sbjct: 222 GTLIGAIAGSGIIESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKG 272 Query: 339 LLRL 342 L+ Sbjct: 273 LVGT 276 >gi|254469685|ref|ZP_05083090.1| urea ABC transporter, permease protein UrtC [Pseudovibrio sp. JE062] gi|211961520|gb|EEA96715.1| urea ABC transporter, permease protein UrtC [Pseudovibrio sp. JE062] Length = 380 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 104/350 (29%), Gaps = 33/350 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ + V L+ YI + + L Y M A L +V G G+LSL Sbjct: 20 AIMMLAVLVPLFNLVVPAEHPLHIPGYIVGLMGKYLCYAMLALALDLVWGYCGILSLGHG 79 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+G Y+ + R + LP + D L++ Sbjct: 80 AFFALGGYAMGMYLMRQIGDRGVYAHPELPDFMVFLNWQELPWFWYGFDQFWFTALMILA 139 Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172 + + + + + D + + F Sbjct: 140 VPGLLAFVFGYLAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGF 199 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 P ++ +S ++ R+ + +RD + + + KL Sbjct: 200 PLQAAETRAALFAATAVFLAISLVACSFVVRSKLGKVMLAVRDAESRTRFIGYRVEHVKL 259 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 AF +S+ G+AGA + I+P F + +I V+ +GG +L ++ Sbjct: 260 FAFILSAMIAGIAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIIGAVLVN 319 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G F +F + +V L ++ L Sbjct: 320 GGKSY--------------FTAAFPDLWLFALGGLFIIVTLFLPKGIVGL 355 >gi|241763746|ref|ZP_04761794.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241367051|gb|EER61436.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 309 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ IGA + ++ Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGLMQEAMPGAPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + +L F + +A L S ++ + + + + Sbjct: 68 LILLLATIIACVVAATLNFVIEKVAYKPLRTSPRLAPLITAIGMSILLQTLAMIIWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ F + +L AS++ + T + A R +N + Sbjct: 128 --KPYPTLLSSTPFQVGGAVITSTQILILGVTVVALASLMYLVNYTKLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ M F + + + GG+ Sbjct: 186 VASLMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G LL + I L +++ +R Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGTLTGGLLG-----SHYTDIFAFIVLIIILTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|146312138|ref|YP_001177212.1| inner-membrane translocator [Enterobacter sp. 638] gi|145319014|gb|ABP61161.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Enterobacter sp. 638] Length = 304 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 88/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIGLALLAWFGLESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + + + I + Sbjct: 69 LILGTLVFTIFVTGVYGWTIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQISQGPRQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + F FV ++L+ + + T + R ++ ++K Sbjct: 129 GVPTMLDGVFRFHIGEGFVQVTYTKVFILIASFAGMLLLTWIISNTRLGRMCRAVQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A G+AG + + F I + +LGG+ Sbjct: 189 MASILGINTDRIISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFVIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL GM + + F L ++++ R Sbjct: 248 GSLPGAMLGGLILGIAEAQFSGMVNSDYKDVFSFG-------------LLVVILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|218896903|ref|YP_002445314.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|218543201|gb|ACK95595.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus G9842] Length = 298 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 120/313 (38%), Gaps = 31/313 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPV 98 M QI I+ +FA +++G G++S + + IGAY + + + I Sbjct: 1 MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++S I+GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 YYV L ++ +++I + I N++ Sbjct: 121 RDRF-------------------TFYYVSLVCLCFIFILLRLFTKSSIGKVLKAISQNEQ 161 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L ++ K+ A V+ ++G F + ++ +F + + + ++GG+ Sbjct: 162 RVEALGYKVLQYKIIASIVAGVVASISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L + I+ + + Y R T ++ + +V+L+ Sbjct: 222 GTLIGAIAGSGIIESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKG 272 Query: 339 LLRLRTPSNFLER 351 + +R Sbjct: 273 FVGTVKKLKSFKR 285 >gi|330976758|gb|EGH76796.1| inner-membrane translocator [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 359 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDHFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFMATVALLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ + Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352 >gi|222081064|ref|YP_002540427.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725743|gb|ACM28832.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 297 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 108/307 (35%), Gaps = 19/307 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ + I +Y + A L++ G GL++ V + G Y I +Y L I Sbjct: 3 DFLIHVTILACLYSLVALSLNLQSGFGGLMNFGQVALFGCGTYGAGI-AYKYDLGFASGI 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++A + G + DY +ATL ++E+ + I+ T G GI L Sbjct: 62 VIAAAFAVFVGWAFAAIGRNLQEDYWGMATLALAEVIRIIVNNEGWFTGGAQGISPVSPL 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + ++ + + ++ + WL + R+ Sbjct: 122 FP--------------SLAGRMQQVAILCSCAALLTVAYILCRWLTDGRYGLGLKMSREE 167 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + SL + + +S AG FA ++P+ SE ++ ++VI+G Sbjct: 168 PQLALSLGYNVAALRRECMILSGLVAASAGFVFAHYISFVAPEQLVSSETFLIWAMVIIG 227 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ + +L + ++ + + ++ L +L R Sbjct: 228 GIGNHRGAIVGACLLQFIF----SFIPFFKDLVGLPTEFVAAARLVMIGGGLIAFMLWRQ 283 Query: 337 HSLLRLR 343 L+ R Sbjct: 284 SGLVPER 290 >gi|221068589|ref|ZP_03544694.1| inner-membrane translocator [Comamonas testosteroni KF-1] gi|220713612|gb|EED68980.1| inner-membrane translocator [Comamonas testosteroni KF-1] Length = 330 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 128/302 (42%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G GLLS AY +G + + + + + Sbjct: 34 FVMKLMCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVAGYSIKAWGFTPEIGMLLGTL 93 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+I G +++ +G Y ++ TL ++++ + ++ T G+ G+ R Sbjct: 94 VGALLGLIFGWLAIRRQGIYFSMITLALAQMLFFVALQA-KFTGGEDGLQGVPR------ 146 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYYV L + + +I+ + + I++N+ Sbjct: 147 -------GKLFGVIDLSSDMVMYYVALVIVVAAFLLIVRTIHSPFGQVLKAIKENEPRAI 199 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+A G+AG+ + ++ + VI + ++GG+ +L Sbjct: 200 SLGYDVNRFKLLAFVISAALTGLAGSLKTLVLGFATLSDVHWTTSGHVILMTLMGGLGTL 259 Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S +A+++ + + + + +++ + T + + L +L+ ++ Sbjct: 260 SGPLLGSAVVVALENKIGEVGTFLAHTTGVEWFGTLGESVTIVTGLIFVLCVLLFRKGIM 319 Query: 341 RL 342 Sbjct: 320 GE 321 >gi|298488923|ref|ZP_07006947.1| Urea ABC transporter, permease protein UrtC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156598|gb|EFH97694.1| Urea ABC transporter, permease protein UrtC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 359 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 99/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVLLLIASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ S +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFSRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAILCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352 >gi|241762794|ref|ZP_04760858.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241368213|gb|EER62405.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 322 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 69/338 (20%), Positives = 128/338 (37%), Gaps = 34/338 (10%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++L+++D +L V +LL L + + I+ +FA G V GSLG+ Sbjct: 1 MKLSRFDIYFGILLAVAGILLPLLRPGEA----LIQLVTLAAIWAVFAVGFDFVFGSLGM 56 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 +S +G Y+ + +YGL + ++ + A + +L+ G + A+ Sbjct: 57 VSFGHATFLGVGGYAVALATQKYGLPFFCGAGIAIAVGAAFALFFSFFALRVSGIFFALV 116 Query: 126 TLIMSEIFQNIL-IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL +S++ + K + T G GI +R F I Y Sbjct: 117 TLALSQLIFILADSKLRGFTGGSDGISGVERP--------------GFLGIDFYDPINFY 162 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + +LG+ L ++ LR + A IR N+ L + K F +S A G+ Sbjct: 163 WFVLGVYALVMLAVISLRSSPFGRAIAAIRSNETRADQLGFNVNRYKQITFVISGALSGL 222 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA A+ ++P M ++ + VI + +LGG SL + + E Y Sbjct: 223 AGALLASLLMYMNPQMLHWTTSGDVIIMTLLGGSGSLWGATVGVIVFEILKEWLSSWTEY 282 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ ++ L + ++ Sbjct: 283 WYG---------------VLGTVFILATIFFPRGIVGE 305 >gi|213967979|ref|ZP_03396125.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301383706|ref|ZP_07232124.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302131591|ref|ZP_07257581.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927322|gb|EEB60871.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 359 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F + ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSITSQGTRATLFLATVVLLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352 >gi|317046827|ref|YP_004114475.1| urea ABC transporter permease UrtC [Pantoea sp. At-9b] gi|316948444|gb|ADU67919.1| urea ABC transporter, permease protein UrtC [Pantoea sp. At-9b] Length = 358 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 103/346 (29%), Gaps = 27/346 (7%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 I LL ++ L Y ++ +IL Y + A L +V G GLLSL + Sbjct: 23 IIALLLLIMPFFALLPASHPLALSTYTLTLVGKILCYAIVAVALDLVWGYAGLLSLGHGL 82 Query: 73 AYAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 +A+G Y + W +P + + L L L Sbjct: 83 FFALGGYGMGMYLMRQASGDGLPAFMSFLSWNELPWFWAGTQHFAWALCLIVLVPGLLAL 142 Query: 123 AIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 + ++ G + + + F + Sbjct: 143 VFGFFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFNVTATST 202 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 I ++ + + +S + L R+ +RD + + KL + +S+ Sbjct: 203 RIGLFVATVLLLLVSIGVGFALARSKFGRVLTAVRDAENRLMFIGYDPRGFKLFVWTLSA 262 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 G+AGA + I+P + +I V LGG +L AI+ G Sbjct: 263 VLCGLAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPLLGAAIVNGAKSW-- 320 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F +F + + LV L ++ L Sbjct: 321 ------------FTVAFPEYWLFFLGLMFILVTLFLPRGVIGLWRR 354 >gi|220919841|ref|YP_002495144.1| ABC transporter related [Methylobacterium nodulans ORS 2060] gi|219952261|gb|ACL62652.1| ABC transporter related [Methylobacterium nodulans ORS 2060] Length = 859 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 102/309 (33%), Gaps = 34/309 (11%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 QI IY ++ G++ ++G LGL+ + Y+ I G S + ++A Sbjct: 40 ITQIAIYTLYGAGVNFLIGYLGLVPFGASFFFGCAGYALAITSGALGGSEISGLVIAAGF 99 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G L+ RG Y ++ TL S+I + KW +T G+ G+ R F Sbjct: 100 ALILAALVGSVILRRRGLYFSLLTLACSQIAFEVAFKWTSVTGGENGLQNVLRPLFPSA- 158 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + + L + +RDN++ S Sbjct: 159 ------------------LAFHAFTVAVVLGLLWGLWRLAHAPFGRLMQALRDNEQRVVS 200 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L KL A ++ IG+ G A + + + + + LGG+ Sbjct: 201 LGYDTYRTKLIALTIAGGVIGVGGGLMALLLQGVYANNLDWQHAGDAVLMAALGGVHHFL 260 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + I + + + ++ + + + L+ + + Sbjct: 261 GPLWGAIVFIVLEDRLSAITENWW---------------LIFAPLIIVFALLSPEGIQGI 305 Query: 343 RTPSNFLER 351 R Sbjct: 306 FQRLVGRNR 314 >gi|218234219|ref|YP_002366652.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|218162176|gb|ACK62168.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus B4264] Length = 333 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 128/325 (39%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSGFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + + I + ++S I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T ++ + +V+L+ L+ Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311 >gi|328881683|emb|CCA54922.1| High-affinity branched-chain amino acid transport system permease protein LivH [Streptomyces venezuelae ATCC 10712] Length = 321 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 95/307 (30%), Gaps = 12/307 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLI 96 + + + +Y + A G ++V G + L++ + G + V L G ++W+ + Sbjct: 20 LVNGLLLGSMYGLVAVGYTMVYGIVQLINFAHGEIFMTGGFGALTVWLILPGGTTMWVAL 79 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P+ + + + + + + L + LI ++ A Sbjct: 80 PLMIVGAVLVATTIAVGAERLAYRPLRGGPRLAP------LITAIGLSLALQQAVWAFYP 133 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 I V + ++L+ A + ++ RT + + Sbjct: 134 EAKSARTFPQIPGGPIELGPVTIQTGDVFLLIAAPICMAFLAFFVMRTRTGRGMQATAQD 193 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + AFA+ +A + + + M F + + +LG Sbjct: 194 PDTAKLMGVNTDRIIVIAFALGAAMAAVGAVAYGLKYGVVDYKM-GFLLGLKAFTAAVLG 252 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ +L + + S+ + L +V+L R Sbjct: 253 GIGNIYGAMIGGVVLGVAETMATAYVSHIPGMEQLGGQSWADVWA---FVLLIVVLLARP 309 Query: 337 HSLLRLR 343 LL R Sbjct: 310 QGLLGER 316 >gi|318604902|emb|CBY26400.1| urea ABC transporter, permease protein UrtC [Yersinia enterocolitica subsp. palearctica Y11] Length = 358 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 105/350 (30%), Gaps = 27/350 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L L+ + LL ++ L L Y ++ +IL Y + A L +V G GL Sbjct: 16 LSLSLAGIVTILLIILPFLALLPADNPLAISTYTLTVVGKILCYAVVAIALDLVWGYAGL 75 Query: 66 LSLNCVIAYAIGAYSYVILG----------SRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 LSL + +A+G Y+ + S W +P S ++ L + Sbjct: 76 LSLGHGLFFALGGYAMGMYLMRQAAGDGLPSFMSFLSWSELPWFWSGSQYFIWVLCLIVV 135 Query: 116 KFRGDYLAIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 + ++ G + + + F Sbjct: 136 VPGLLAFIFGYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGF 195 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 S I ++ L + S ++ + R+ +RD + KL Sbjct: 196 SVSATSTRIALFLATLALLIASLALGFAVARSKFGRILTAVRDAENRLTFCGYDPKGFKL 255 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 + +S+ +AGA + I+P + +I V LGG +L I+ Sbjct: 256 FIWTLSAVLCALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVN 315 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G F + + + LV L ++ L Sbjct: 316 GAKSW--------------FTMAMPEYWQFFLGLIFILVTLFLPKGVIGL 351 >gi|254525468|ref|ZP_05137520.1| urea ABC transporter, permease protein UrtC [Prochlorococcus marinus str. MIT 9202] gi|221536892|gb|EEE39345.1| urea ABC transporter, permease protein UrtC [Prochlorococcus marinus str. MIT 9202] Length = 376 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 108/358 (30%), Gaps = 35/358 (9%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MS+ ++L+K +L+ L+ + T + ++ + L + A G+ ++ Sbjct: 1 MSLSKIKLDKK----IILSFWIILIALVIAAPTLLPVFRLNLLGRYLSLSIVALGVDLIW 56 Query: 61 GSLGLLSLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMIS 103 G GLLSL I +A+G Y + + + Sbjct: 57 GYTGLLSLGQGIFFALGGYCAAMYLQITSSSEFPNNIPEFFALYGVEKLPFFWEPFRSLV 116 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 I +P+L + + ++ +IL + + + Sbjct: 117 YTFFAIWIIPALVAGLIGFLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLK 176 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 + + F + +++ + S WL + N IRD++ Sbjct: 177 TDVTQLFGQMVGSESMQRIFFWITAILVIASWFFAKWLVKGRFGNILIGIRDDEPRVRFT 236 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + K F+++ G++GA + +SP +I ++ V +GG +L Sbjct: 237 GYNPVIFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLG 296 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + + LV+ +L Sbjct: 297 AILGAVFINYAKSLVSE--------------ALPASWMFIQGGLFILVVTALPEGVLG 340 >gi|284045826|ref|YP_003396166.1| inner-membrane translocator [Conexibacter woesei DSM 14684] gi|283950047|gb|ADB52791.1| inner-membrane translocator [Conexibacter woesei DSM 14684] Length = 355 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 104/308 (33%), Gaps = 8/308 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 LIYV L + G+ G++S V AIGAY+ +L GL L + Sbjct: 31 FQRTVTTALIYVTAVVALYVFAGNSGIVSFGHVAFMAIGAYTAGLLTIPSGLKQVTLPNL 90 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 I+ + L + + L + + + + Sbjct: 91 YGFIANTTVSADVALLIGGVVAALFALVVAVPL---MRLNGIAAAIGTFSLLVIVYVVAG 147 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + V E+ + +++L ++ + + R+ R+ Sbjct: 148 NWYDLTNGTQTLVGVPAVVDIEMALPWLILV-----LALAFAYQESRWGRRLRSTREELL 202 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + AF +S+ G+AG P F F + ++++I+GG+ Sbjct: 203 AAQATGVRVAKERTIAFVLSAFCAGVAGGLLGLFLGAFGPQQFYFDLTFLTVAMLIIGGL 262 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SLS ++ + EL + + L L+ + ++++R Sbjct: 263 RSLSGAVVGALVVATLSELLTRFEEHGIDVLGVGVHPRPGLREILLAALMLTILVLRPQG 322 Query: 339 LLRLRTPS 346 + R S Sbjct: 323 ITGGRELS 330 >gi|167721839|ref|ZP_02405075.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding/permease protein [Burkholderia pseudomallei DM98] Length = 315 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 117/327 (35%), Gaps = 22/327 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V +L GA + +Y ++ I +Y + A GL ++ G G+ S Sbjct: 9 AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ L + YG+S WL + +++ +++G+ +++ G +L + T+ Sbjct: 69 GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + F +YY++ + + Sbjct: 129 FLFGNLDWLGKYDGINGIPALALFGHAFDTGR---------------SLYYLIWIVVLAA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L + A R +R ++ + ++ F ++ ++G +A + Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F S I + + ++GG+ + AI+ + + + + F Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L++ + Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313 >gi|84503099|ref|ZP_01001195.1| hypothetical protein OB2597_01462 [Oceanicola batsensis HTCC2597] gi|84388643|gb|EAQ01515.1| hypothetical protein OB2597_01462 [Oceanicola batsensis HTCC2597] Length = 382 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 106/354 (29%), Gaps = 42/354 (11%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V +++ L L + + + + L+Y M +++ G G+L+L + + +GAY Sbjct: 16 VLFIVIVLGLPLVMTDVFWLNRIAKYLVYGMLGIAIALSWGYAGILNLGQGLFFGLGAYM 75 Query: 81 YVILGS--------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + +W P + L + Sbjct: 76 VAMSLKLQSYTSLQQGSENPVPDFMLWNAEPGAPTELCCITSGSWLWLPFQAQGFGMAMA 135 Query: 127 LIMSEIF----------------QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 +I+ I +I + + I A + + L Sbjct: 136 IILPVIVALILSSAIFRLRVSGVYVAIITLALVLLVRLLIIDAQPVTNGFNGLTDLGWLT 195 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 F Y + YY++ + WL T ++ RD+ L + Sbjct: 196 IGGVEFDPYLVSTYYIVAVSICVVLLATRWLVSTRAGLILQSTRDDPNRSRYLGYDVAAY 255 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 ++ F VS+ G AG + + + SP S +I ++ +GG +SL A + Sbjct: 256 QVFFFTVSAGIAGFAGMLYVIAAEFASPSFLDISFSISMVVWAAVGGRSSLIGAAIGAIL 315 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + F ++ + LV+L L L Sbjct: 316 INTIEATASE------------TEMFQEAWKLIIGVIFVLVVLYMPRGLAGLAE 357 >gi|224369599|ref|YP_002603763.1| LivM4 [Desulfobacterium autotrophicum HRM2] gi|223692316|gb|ACN15599.1| LivM4 [Desulfobacterium autotrophicum HRM2] Length = 436 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 106/331 (32%), Gaps = 24/331 (7%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ V + Y + ++ V+ ++I+ G G S + Sbjct: 97 HLPLVIATLVHLAAFYGVLHIWADINDYRVLVLKLTMVSVILTISINIINGYQGEFSCSH 156 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 A+GAY+ L + + +A++ G M L + S Sbjct: 157 PGFMALGAYTSSALTLLFFADD--KLFGAALLPAWLGPWMFPLI-------LIAGGFVAS 207 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + I I ++ + + + +L V+ Sbjct: 208 IGSLVVAIPSFRTRGDYLAIISLAFMFIVKSAIENLEVLGGPRGMSSQPNYASLPVVFAW 267 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 +S II + + A +RDN+ A S+ K++AF + + G+AG FA Sbjct: 268 MAISIWIINNFVSSTMGKALNAVRDNEPAADSMTVNTRKTKMTAFMFGAFWAGIAGGLFA 327 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 ++P F + ++++V GG+ S+ + + E + + + + Sbjct: 328 HVLRYVNPATFGIQKLAEILAMVYFGGLNSIWGSIVGAVSISVLGEALRPLELFKWIIIP 387 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 V+L R H L+ Sbjct: 388 LILIL---------------VMLFRPHGLIS 403 >gi|167618989|ref|ZP_02387620.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis Bt4] Length = 401 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 98/347 (28%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 58 IAVGIGVPLAALVAPESSAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 117 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 118 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLAPA 177 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 178 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 237 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ + + S + + + IRD + L + + KL + Sbjct: 238 SPGTRCALFLITVAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 297 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P + +I + V +GG +L + G Sbjct: 298 VVSAVLCGIAGALYVPQVGIINPSEMSPANSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 357 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 358 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 390 >gi|218781637|ref|YP_002432955.1| branched-chain amino acid ABC transporter permease [Desulfatibacillum alkenivorans AK-01] gi|218763021|gb|ACL05487.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 435 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 135/349 (38%), Gaps = 40/349 (11%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V +F + Y S+ + I Y M A G+ +++G GL++L A+GAY Sbjct: 80 WVLYPFVFALFLLYRLPDYYLSVMVMIGYYGMGALGVQLLIGYTGLITLGHAAFIAVGAY 139 Query: 80 SYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 ++ + + I V+ + +G ++ GLPS K +G YL + T+ Sbjct: 140 VSALMVLYFHWPQFILDAGLAYPISIVVAGVFAGLWSVLFGLPSAKVKGFYLILTTMAAQ 199 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 I + ++ G G + + + ++ +Y+++ + Sbjct: 200 FITVDFILTQYVAQIGGRGQAFSLPPGTIKVGPW-----------VIDSDVKIYFLMAFI 248 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L + + L R+ AW IRDN A ++ I+ KL AF V+ G+ GAF+ Sbjct: 249 LTLMVAFVANLFRSRAGRAWVAIRDNDIAAETMGINIVQYKLLAFFVAGFLGGVTGAFWL 308 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG---------- 300 ++ +SP+ F + ++ ++ ++++GG+ S+ ++ + E Sbjct: 309 SNTAALSPEHFPWFLSLWLVGVILIGGVGSIHGAILGALFMVILTESLQWSVIPLTDYYD 368 Query: 301 ----------MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + + K F + +A+ ++ + L Sbjct: 369 EVADTLNPGQLKNILDWLVPKLLMDFAYIKDMVFGLAICAFLIFEPNGL 417 >gi|239816980|ref|YP_002945890.1| urea ABC transporter permease [Variovorax paradoxus S110] gi|239803557|gb|ACS20624.1| urea ABC transporter, permease protein UrtC [Variovorax paradoxus S110] Length = 405 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 96/355 (27%), Gaps = 37/355 (10%) Query: 11 YDKILCLLAVVYPLL-----LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + L VV + + Y ++ +I+ Y + A + ++ G G+ Sbjct: 18 WTAFFVALIVVCAVAPVLNMVVPAGSPLHMSDYAVALVGKIMCYAICALAMDLIWGYTGI 77 Query: 66 LSLNCVIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIM 110 LSL + +A+G Y + W +P S + + Sbjct: 78 LSLGHGLFFALGGYMMGMYLMRQIGRDGNYKSDLPDFMVFLDWKTLPWHWTFSDSFIATL 137 Query: 111 GLPSLKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 L +I + + + Sbjct: 138 VLIVAVPGLIAFVFGFFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFK 197 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 R P + + ++ + WL + + IRD + Sbjct: 198 RILGIPIATQEMRMTLFALTGLTLLGFFLFAKWLIASKFGRVLQAIRDAETRVMFSGYNP 257 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + KL+ + +S+ G+AGA + I+P + +I + +GG +L Sbjct: 258 LPYKLTIWVISAVMCGVAGALYVPQVGIINPGEMSAANSIEIAIWAAVGGRATLIGPIIG 317 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 I+ G ++ + V L + ++ L Sbjct: 318 AFIVNGAKSWLT--------------VAYPEYWLYFLGAVFIAVTLFLPNGIVGL 358 >gi|88601639|ref|YP_501817.1| inner-membrane translocator [Methanospirillum hungatei JF-1] gi|88187101|gb|ABD40098.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Methanospirillum hungatei JF-1] Length = 325 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 64/334 (19%), Positives = 127/334 (38%), Gaps = 28/334 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 AV+ ++ L S +Y ++ I +LI++++A + + G SL + +G Sbjct: 13 FAVLAFIVAILLPVIVGSNQYYRTVLILMLIFIIYASAWNFLT-FSGQGSLGHAAFFGLG 71 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y ++ G+ + + + A ++ G+++G+ ++ R +LA+ T + I Q ++ Sbjct: 72 GYFSSLIAINSGIPLIIAVFAGACVTAGIGVLIGMTCVRLREWFLAMVTFGFAVIIQTLI 131 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + +L + PSS YY +L + S + Sbjct: 132 V--------------ISQLSPITGGWDGFAVPKLIPSSIPGSPNLEYYGILAIAVGSILV 177 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L ++ I A IR+N+ + + KL AF +SS +AGA IS Sbjct: 178 FHLLLKSKIGLALAAIRENEMEAKASGINPVPFKLFAFGISSFITAIAGALEVCHFGYIS 237 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P++F + I I GG+ +L+ T ++ + E + F Y ++ Sbjct: 238 PEIFGTDISFWPIIYSITGGLGTLAGPIIGTIVISLLWEGLNALGFTYERFIVIGILLIL 297 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L+ L +L+R Sbjct: 298 TIIFL-------------PKGLVSLPERLQYLKR 318 >gi|148254024|ref|YP_001238609.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146406197|gb|ABQ34703.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 365 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 65/306 (21%), Positives = 119/306 (38%), Gaps = 16/306 (5%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIW 93 S +++++ I LI + A GL++++G G SL +G Y+ +L L + Sbjct: 46 SDYWLNAVLIPFLIMSLTALGLNLLMGYAGQASLGTGGFMLVGTYATYNLLLRLPELPLP 105 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + + +ISG G+I GLPSL+ +G YL +TL + + + ++ +N ++ Sbjct: 106 VSLLLGGIISGLVGVIAGLPSLRIKGFYLVASTLATQFLLEWLFNQYGWFSNYSTSSSIS 165 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + Y + L + +I + L R+ W I Sbjct: 166 APRL-------------AILGRDLSSPAGRYLLTLATVAVVTAIAVRLVRSQTGRTWMAI 212 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENIIVISI 272 RD A + + KL AF VSS IG+AGA + A + F + V+ Sbjct: 213 RDMDTAAAVIGIPVASGKLKAFFVSSLVIGIAGALWGFAYLGTVDARSFNLDRSFQVMFA 272 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 +I+GGM S+ A +I + L + + N + + + Sbjct: 273 IIIGGMGSIVGNYLGAAFMILLPILLDHVGTRLLGGAIDAGQLENFQR-AFFGALIIWFL 331 Query: 333 LMRSHS 338 + Sbjct: 332 IKEPRG 337 >gi|283853507|ref|ZP_06370748.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] gi|283571088|gb|EFC19107.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] Length = 297 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 94/305 (30%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ + +GAY + L + + + Sbjct: 10 LLNSLTLGSLYALVAIGYTMVYGILRLINFAHSEIFMLGAYFVFWGITLGHLPWPVAMVL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ + G+++ + + D I+ LI S L + Sbjct: 70 AIAVTASLGVLVDQVAYRPLRDAPRISALISSIGVSFFLQNVAIVFFQA----------I 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R V +V L L ++ + RT R I + + Sbjct: 120 PREVYRPSWLENPILMGDVRVLPLTLFVPLLSLALMLGLVYIVYRTKTGLGMRAISKDIE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + F + SA +G +A ++ P M + GG+ Sbjct: 180 TSYLMGVPVNRVIAITFGIGSALAAASGIMWALRYPQLQPIMGTI-PGFKAFIAAVFGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ L + + + F + L LV++++ Sbjct: 239 GSIQGAVVGGLALGFIEIMT-----------VAFFPDLAGYRDAFAFVLLILVLMVKPTG 287 Query: 339 LLRLR 343 L R Sbjct: 288 LFGER 292 >gi|163792998|ref|ZP_02186974.1| ABC transporter permease protein [alpha proteobacterium BAL199] gi|159181644|gb|EDP66156.1| ABC transporter permease protein [alpha proteobacterium BAL199] Length = 338 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 136/323 (42%), Gaps = 22/323 (6%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L L L Y+ + I IL++ SI +G GL+SL IGAY Sbjct: 16 VLLAALLTLPLLGFSDYVLHIAISILLWAFVYTSWSI-MGRFGLVSLGHGAFLGIGAYGT 74 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG--DYLAIATLIMSEIFQNILIK 139 +L + YGL+ W+ IP+S ++SG G+++GLP +F+ Y A+ TL ++E+ + +++ Sbjct: 75 TMLWNHYGLTPWVGIPISIVLSGILGLLIGLPCFRFKITGHYFALVTLALTEVARLLIVA 134 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + T G G+ + S F + + +Y+++G+ + I Sbjct: 135 LRDHTGGSLGVTPVGMV--------SPENPVSFYALQFASKSVWFYIVVGVWLVGLLIWR 186 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + R+ + A I + A S+ + KL+ +S+A GA + + I+P+ Sbjct: 187 AVDRSMLRYAMEAISQEEDASASVGINVTRTKLTVTVISAAMTAFGGAVYGQYQQYINPE 246 Query: 260 M-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + ++ ++ VI GGM I I + E L F F+ Sbjct: 247 TVSGIAISLQIVFAVIAGGMFVQLGPTVGAVITILLGEGLR----------LGFGNQFHG 296 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 T+ + L L I+ +L Sbjct: 297 LDVTIYGLMLILFIIYMPRGVLG 319 >gi|170750813|ref|YP_001757073.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] gi|170657335|gb|ACB26390.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] Length = 601 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 98/323 (30%), Gaps = 29/323 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 V L L++ + ++ + +IY + A + ++ G G+L+ + IG Sbjct: 26 FVVAALAALALWIAPLFLDTFAVNVLTRSMIYAVLAVTVDLLWGFAGILTFGQAAFFGIG 85 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ ++ + YG + + A A ++ + + I+ Sbjct: 86 AYATAMILTAYGATPLGIAAAIAAALVAPALLGLAVGWLSFYHRSTPLYASVISLVVPIV 145 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + G+ + + F F + + Sbjct: 146 VVQLIYSGGEWTGSSSGLVGFDVLPFEIEGYFR---------------LAALFLIVVTLA 190 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L R A +RDN+ L ++ A + G+AG FA + ++ Sbjct: 191 AWILVRADAGRALVALRDNEARCAYLGLNPRRLQIRLTAALAGIAGLAGFLFANASGVVA 250 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F ++ V LGG +L T + + G Sbjct: 251 PENAGFLFGTELVIWVALGGRGTLLGPVLGTVAIDYLAANLSG--------------DLP 296 Query: 318 MRHTTLMVIALFLVILMRSHSLL 340 L+ A +I++ L Sbjct: 297 FLWQLLLGTAFVAIIILLPGGLA 319 >gi|157371439|ref|YP_001479428.1| inner-membrane translocator [Serratia proteamaculans 568] gi|157323203|gb|ABV42300.1| inner-membrane translocator [Serratia proteamaculans 568] Length = 338 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 92/315 (29%), Gaps = 14/315 (4%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 L + + + + +Y + A G ++V G +G+++ Y I AY I + Sbjct: 32 LLIMDVFFLQQLINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLAL 91 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 P+ + + +++ + + I + Sbjct: 92 LSFFGLQSFPLLILGTLVFTIVVTGVYGWVIERIAYKPLRNSTRLAPLISAIGMSLILQN 151 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 T+ + F + ++L+ A + ++ T + Sbjct: 152 YAQISQGPRQQGIPTLLDGVFRLNFDGGVIQITYTKVFILVASLLGMAILTYIIQHTRLG 211 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 R + ++K L F + +A G+AG + + F I Sbjct: 212 RICRATQQDRKMASILGINTDRVISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFIIGI 270 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ SL +L GM + + F Sbjct: 271 KAFTAAVLGGIGSLPGAMLGGLLLGVAEAQFAGMVNSDYKDVFSFG-------------L 317 Query: 328 LFLVILMRSHSLLRL 342 L ++++ R LL Sbjct: 318 LVVILIFRPQGLLGR 332 >gi|86359039|ref|YP_470931.1| branched chain amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86283141|gb|ABC92204.1| probable branched-chain amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 334 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 122/336 (36%), Gaps = 28/336 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 ++ + LA + ++ +G + ++ +++ + A L +V G G+ + Sbjct: 13 QHRRGYVSRDLASLIVIIAVAAIGYFAFPDNL-ALLTRMITIALLALSLDLVTGYCGVAT 71 Query: 68 LNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L + GAY+ IL + Y L++ A G++ G L+ G + + Sbjct: 72 LGHAALFGSGAYAAGILSAHYGINDPLLMLLAGIAGGVASGLLSGAIILRAHGLPQLVLS 131 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + +F K T G G+ LG F +Y +++ Sbjct: 132 IALIHLFHEFANKASSWTGGSDGLSGIAPDPVLGF------------FEFDLYGRTAFFL 179 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + ++ L R+ R I+ + ++ + A + + +S A G+ G Sbjct: 180 GTALLLVVFVLLRLLVRSPFGMLCRAIKQDPLRIRAMGGSPKGALIRMYTISGAVAGVGG 239 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A A S + D F+++ + I++LGG SL T I + + N +++ Sbjct: 240 ALNAISTQVVGLDSLSFTQSAEALVILVLGGTGSLFGALSGTIIFMLFEDYVSAANPFHW 299 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 T++ L V+L L Sbjct: 300 --------------LTMVGALLIAVVLFAPKGLYGT 321 >gi|72160482|ref|YP_288139.1| branched-chain amino acid ABC transporter permease [Thermobifida fusca YX] gi|71914214|gb|AAZ54116.1| branched-chain amino acid ABC transporter permease protein [Thermobifida fusca YX] Length = 374 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 114/318 (35%), Gaps = 13/318 (4%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 + T + + L+ A ++ G +GLLS + +A GAY V+L Sbjct: 54 IPGLFEGTLNSPSTLHVLATCLVLGGLATSYDLLYGRVGLLSFGHALYFAAGAYLAVLLM 113 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 L + ++ +++G SL+ G LA+ TL ++ ++++ Sbjct: 114 GILELPLLWSALIAVASGTLLALVLGAISLRVSGIALAMVTLAFAQAGSILVVR------ 167 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 R+ + V+ + +Y++ +G ++ ++ WL T Sbjct: 168 ------DPGRMTGGEEGLSLNPDLVPDAFIGVVNTVNLYWLAVGYVVVALGVVWWLSATP 221 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + W+ IR N++ L KL+AF V+ A + G + ++P + Sbjct: 222 VGRVWQGIRANEQRVSVLGVNPYPYKLAAFTVAGALASLGGVVYLVVSGGVTPAITTAEF 281 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVE-LCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + ++ +V LGG + + V L F+ L + + ++ Sbjct: 282 TLTLLVMVSLGGAGTRWGPLVGAVVYTYVDHRLLQLAASDVFDGLPAVVRAPLSQPLFIL 341 Query: 325 VIALFLVILMRSHSLLRL 342 L++ L L Sbjct: 342 GTLFVLLVFFFPGGLAAL 359 >gi|330938382|gb|EGH42008.1| inner-membrane translocator [Pseudomonas syringae pv. pisi str. 1704B] Length = 359 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRAALFLATVALLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSTVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ + Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352 >gi|260220659|emb|CBA28420.1| High-affinity branched-chain amino acid transport system permease protein braD [Curvibacter putative symbiont of Hydra magnipapillata] Length = 309 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 100/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + + S+ Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVVMVGALTSWTIIGLMQESMPGTPGP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + +L F + +A L S ++ + + + + Sbjct: 68 VILLIALVIACVVAAALNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAMIIWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +L+ + + +L A ++ + T + A R +N + Sbjct: 128 --KSYPTLLPGNPIDIAGAVITPTQVMILGVTAASLAVLMWLVNYTKLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ M F + + + GG+ Sbjct: 186 VAALMGVKPDVVISATFIIGAVLAAIAGVMYASNYGTAQHAM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G +L + I L +V+ +R Sbjct: 245 GNLAGAVVGALLLGLIEAIGAGYIGALTGGVLG-----SHYSDIFAFIVLIIVLTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|167841010|ref|ZP_02467694.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 308 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTSAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALVVSVLVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDMSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIALMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ + L F + + + G + +++P F I Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|329113960|ref|ZP_08242727.1| Urea ABC Transporter Permease Protein UrtC [Acetobacter pomorum DM001] gi|326696707|gb|EGE48381.1| Urea ABC Transporter Permease Protein UrtC [Acetobacter pomorum DM001] Length = 379 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 98/359 (27%), Gaps = 33/359 (9%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F + + V+ L ++ S+ + L Y + A + +V G Sbjct: 12 FPGAIRMAAVTFAVTIVLAGASLLPEANPLHVSAFVVSLAGKYLAYAILALSVDLVWGFA 71 Query: 64 GLLSLNCVIAYAIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACG 107 G+L+L +A+G Y+ + W +P S Sbjct: 72 GILTLGHAAFFALGGYAMGMYLMREIGTRGVYGNPNLPDFMIFLSWKSLPWYWWGSDHFA 131 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 +M L + L + + A + + L Sbjct: 132 WVMLLVLIVPGILAGVFGWLAFRSRVSGVYLSIITQALTYALMLAFFQNGLGFGGNNGLT 191 Query: 168 RFFRFPSSFVIYEIFMYYVLL---GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 F + + + +L+ + + WL +RD + L Sbjct: 192 DFKDILGADLHSPLTRAVLLVVTGAVLAGCLLLSRWLVSGRFGYLLVAVRDAENRTRFLG 251 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 AKL + S+ G+ GA + I+P F + +I + V +GG +LS Sbjct: 252 YRPEQAKLLIWVFSAMVAGIGGALYVTQVGIINPGEFAPANSIESVIWVAVGGRGTLSGS 311 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 ++ L ++ L L+ LR Sbjct: 312 VLGAVLVNCGKTLFTAWLPEFWLYGLGLLFLVTTLFL--------------PQGLMGLR 356 >gi|237798340|ref|ZP_04586801.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021192|gb|EGI01249.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 359 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRAVLFLSTVALLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 GEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTMAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352 >gi|156933946|ref|YP_001437862.1| hypothetical protein ESA_01772 [Cronobacter sakazakii ATCC BAA-894] gi|156532200|gb|ABU77026.1| hypothetical protein ESA_01772 [Cronobacter sakazakii ATCC BAA-894] Length = 357 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 96/333 (28%), Gaps = 27/333 (8%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL- 84 L + ++ +IL Y + A L +V G GLLSL I +A+G Y+ + Sbjct: 36 LLPASHPLAVSTWTLTLMGKILCYAIVAVALDLVWGYAGLLSLGHGIFFALGGYAMGMYL 95 Query: 85 ------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 S S +++ L + A + Sbjct: 96 MRQAAGDGLPAFMSFLSWSELPWYWWGTSNFLWALLLVVLVPGLLALVFGFFAFRSKIKG 155 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +I G + + + F + I ++ L + Sbjct: 156 VYFSIITQALTFAGMLLFFRNETGFGGNNGFTGFTTLLGFSLTATGTRIALFIATLALLL 215 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 ++ LWL R+ +RD + KL + +S+ G+AGA + Sbjct: 216 ACLAVGLWLARSKFGRVLTAVRDAESRLMYCGYDPRGFKLLVWTISAVMCGLAGALYVPQ 275 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P + +I V LGG +L ++ G L F Sbjct: 276 VGIINPGEMSPTNSIEAAIWVALGGRGTLVGPVFGALLVNGAKSL--------------F 321 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + L+ L + L Sbjct: 322 TVVMPEYWQLFLGLIFILITLFLPRGVAGLLRR 354 >gi|119718342|ref|YP_925307.1| inner-membrane translocator [Nocardioides sp. JS614] gi|119539003|gb|ABL83620.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Nocardioides sp. JS614] Length = 352 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 107/308 (34%), Gaps = 18/308 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V + + + A I I ++ + A ++I G G+LS+ AIGAY Sbjct: 17 LVLTAAVIVIMIAIGQDPAQVDSAITIAVFSLLALSVAISYGQAGVLSVAQAAFAAIGAY 76 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + IL +R+ L + + + ++ + + LA+ATL+ EI +L + Sbjct: 77 ATAILTTRWELHPLIGLVGAVLVPAVIAYPLSRLVGRLSHLALAVATLVFGEIVVILLRE 136 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G GI L + + + L + Sbjct: 137 GGDFTGGYIGISGIPPLPW------------------ALDLKNYAIFAWVLVILVVGLYA 178 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L ++ +TIR + + + F++S+A G+AG +A ++P+ Sbjct: 179 NLVSSSHGRGLQTIRWDTLRARADGVDVPARVAGVFSLSAAIAGLAGWLYAHYLTFLAPE 238 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + +I I + ++GG + IL+ V + + Sbjct: 239 SLPSAFSITAILMAVVGGTRYVLGPIVGATILLYVNNTLPSEEAQGLLYGAALVVALLVA 298 Query: 320 HTTLMVIA 327 ++ + Sbjct: 299 PQGVLGLL 306 >gi|312135193|ref|YP_004002531.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL] gi|311775244|gb|ADQ04731.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL] Length = 312 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 72/338 (21%), Positives = 134/338 (39%), Gaps = 42/338 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K + +V L++ L + YI I++ ++ A L+++ G G S Sbjct: 1 MKKRFLVYSAFIIVLYLIITLLMKIGIIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60 Query: 68 LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L AIGAY+ + + +L + + +++ CG+I+GLP L+ RGDYLAIAT Sbjct: 61 LGHAGFMAIGAYTTAVLATLEKPVPFYLTVLIGGILAMICGLIIGLPVLRLRGDYLAIAT 120 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ + G +GI + Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 LS +IL + ++ A IR+++ A ++ K+ AF + + F G+AG Sbjct: 157 --VFTVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + ++ S I PDMF F ++I ++ IV+ + ++ Sbjct: 215 SIYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + L + L +++L R L+ + Sbjct: 260 TIISALLQDYPAVRMVLYSLILIIIMLFRPQGLMGTKE 297 >gi|148258222|ref|YP_001242807.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146410395|gb|ABQ38901.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 387 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 106/360 (29%), Gaps = 38/360 (10%) Query: 8 LNKYDKILCLLAVVYPLL------LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 L++ I L+ +L L A + Y+ ++ + + Y + A + ++ G Sbjct: 10 LDRAATIFVLIVAACGVLIPLSNLLLPAGSALQVPTYLVALWGKYVCYAILALSIDLIWG 69 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G+LSL +A+G Y+ + R + + LP D Sbjct: 70 YCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYGNPILPDFMVFLNYSKLPWYWHGFDM 129 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162 A L++ + + + + + D + Sbjct: 130 FWFAALMVLFVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + F ++ + L+ I + + + IRD + Sbjct: 190 LTDFKDILGFNVQAEGTRAALFALSCLALILAFLICRAVVSSKLGKVLIAIRDAESRTRF 249 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L + KL F +S+ G+AGA + I+P F +I + V +GG +L Sbjct: 250 LGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWVAVGGRGTLV 309 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A ++ ++ LV L+ +L Sbjct: 310 GAALGAVVVNYAKTFFTS-------------GVLAPYWLFMLGALFVLVTLLLPKGILGT 356 >gi|300311771|ref|YP_003775863.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300074556|gb|ADJ63955.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 628 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 116/269 (43%), Gaps = 18/269 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + ++IL+ V+FA L ++G G++S + +GAY+ ++ R + L + Sbjct: 345 PYLPVLMVEILVAVLFAASLHFLMGPGGMVSFGHAAYFGLGAYAAALVTLRLQWPMPLAM 404 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 A + ++ G ++ G YLA+ TL ++I + +W +T G G+ Sbjct: 405 LAGAGTAMLAALLFGWFCVRLSGVYLAMLTLAFAQIVWAAIYQWDDLTGGSNGLV----- 459 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++ + + YY+ L L ++ + A R RD Sbjct: 460 -------------GLRTAAALASPLAYYYLALLCSALGVYLLRRVIHAPFGLALRAARDA 506 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +L + + FA++ F G+AG FA S+ ISP++ + ++ + +V+LG Sbjct: 507 SGRAQALGMDVRALQWGGFALAGLFCGLAGVLFAFSKGSISPEVAGVNRSVDGLVMVLLG 566 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYY 305 G+ SL+ ++ + +L Y+ Sbjct: 567 GVQSLAGPLLGASVFTWLQDLVARETDYW 595 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 97/306 (31%), Gaps = 18/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + M A GLS++ G +++ Y +G AYS V W Sbjct: 10 LLNGLADASAMFMVAAGLSLIFGVTRIVNFAHGSFYMLGLYLAYSLVDRLGATPWGYWAA 69 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + ++A+ A G ++ L L+ + L+ + ++ G ++ Sbjct: 70 LLLAALPVAALGALVELTILRRIYRAPELFQLLATFALVLVIKDAALWYWGPEDLFGPRA 129 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 G + ++ + A + L L RT R Sbjct: 130 PGLAGA----------VQVLGRRLPQYDLLLMAIGPLVFALLWLLLNRTRWGALIRAATQ 179 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + FA+ G+ GA +V++ Sbjct: 180 DREMLGALGVNQAWLFTGVFALGCFLAGLGGALQGPRLPA--NLALDLDTIGTAFVVVVV 237 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A ++ V LC + S + S + + + +++++R Sbjct: 238 GGMGSIGGAFAAAVLIAEVKALCIALGT---VSCFGIELSLSRLTLVAEFLVMAVILVVR 294 Query: 336 SHSLLR 341 LL Sbjct: 295 PWGLLG 300 >gi|300715223|ref|YP_003740026.1| ABC transporter permease [Erwinia billingiae Eb661] gi|299061059|emb|CAX58166.1| ABC transporter, permease protein (UrtC-related) [Erwinia billingiae Eb661] Length = 358 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 53/327 (16%), Positives = 95/327 (29%), Gaps = 27/327 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 42 PLALSTYTLTLIGKILCYAIVAVALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQASG 101 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138 W +P + + L L L + ++ Sbjct: 102 DGLPAFMSFLSWNELPWFWTGTQHFAWTLCLIVLVPGILALIFGFFAFRSKIKGVYFSIM 161 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G + + + F + I ++ + + S I Sbjct: 162 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFQVTATSTRIGLFVATVLLLVASLGIG 221 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 222 FALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALYVPQVGIINP 281 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L I+ G F +F Sbjct: 282 SEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKSW--------------FTVAFPE 327 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 + + LV L ++ L Sbjct: 328 YWLFFLGLMFILVTLFLPRGVIGLIRR 354 >gi|239815404|ref|YP_002944314.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239801981|gb|ACS19048.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 355 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 118/319 (36%), Gaps = 11/319 (3%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 S+ ++L++V+ +++G G++S + + IGAY I SR G Sbjct: 32 PFIFPGVKALSVAAKVLVFVVLVASFDLLLGYTGIVSFAHTMFFGIGAYGIAISASRLGP 91 Query: 91 SI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 + L + S +S +GL SL+ R + A+ TL ++ FQ + + T G+ Sbjct: 92 NWGAVLLGLAASLAVSLVLSFAIGLFSLRVRAIFFAMITLAVASAFQTLASQLSDFTGGE 151 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ + S F + YY+L + +L + + Sbjct: 152 DGLTFKLPELISPSFEFSEDPFLGVSLDG---RLLCYYLLFVAAVVLVLALLRIVNSPFG 208 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSEN 266 + IR+N+ ++ ++ + +A +S+ F +AGA A F Sbjct: 209 RVLQAIRENEFRAEAIGYRVVVYRTTAAVLSALFATLAGAMLAIWLRYNGPDTSLSFEIM 268 Query: 267 IIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 I V+ IV++GGM ++ A + + + +L + R Sbjct: 269 IDVLLIVVIGGMGTIYGAAIGAVLFVVAQSYLQDLLRVGSEAASGLPWLAALLSPDRWLL 328 Query: 323 LMVIALFLVILMRSHSLLR 341 + + L + ++ Sbjct: 329 WLGVLFVLSVYYFPTGIVG 347 >gi|91776126|ref|YP_545882.1| inner-membrane translocator [Methylobacillus flagellatus KT] gi|91710113|gb|ABE50041.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Methylobacillus flagellatus KT] Length = 389 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 100/348 (28%), Gaps = 36/348 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + L + + + + + L Y A L ++ G+ G+LSL I + Sbjct: 14 GAIGLGILAAFILVVLPLGLEPFRLGLIGKYLTYAFVAVSLVLLWGNGGILSLGQGIFFG 73 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG-----LPSLKFRGDYLAIATLIMS 130 +G Y+ + S F+ L I +++ Sbjct: 74 LGGYAMAMFLKLEASDPESTAIQSTPGIPDFMDWNQLTALPWFWEPFKSFPLTILAILIV 133 Query: 131 EIFQNILIKWKPITNGKAGIYVA-----------------DRLYFLGTTVRSLIRFFRFP 173 F LI + G+Y A + L + Sbjct: 134 PTFFAFLIGYAMFKRRVGGVYFAIITQAIALILSILIIGQQGYTGGVNGITDLKTLMGWD 193 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + +YYV G+ + ++ + +RD ++ + K+ Sbjct: 194 IRTDSAKYVLYYVNAGLLIACILLSRYVLSSKFGMLLLAMRDKEERVRFSGYDVSNFKIF 253 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 F +S+ + GA F +SP +I ++ +GG SL T ++ Sbjct: 254 IFCLSALISAIGGAMFTLQVGFMSPTFIGIVPSIEMVIFAAVGGRMSLIGAVYGTLLVNF 313 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + F ++ LM V++ + L Sbjct: 314 GKTM--------------FSETYPELWLFLMGGLFIAVVMFFPNGLAG 347 >gi|254502617|ref|ZP_05114768.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222438688|gb|EEE45367.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 353 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 115/323 (35%), Gaps = 11/323 (3%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---L 84 F +I I+++ +++G G++S + + IGAY + Sbjct: 28 AFAPFLFPGTRSLETAAKICIFIVLVASYDLLLGYAGIVSFAHTMFFGIGAYGTALALST 87 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 S+ A+++ + +GL SL+ + + A+ TL ++ F ++ + +T Sbjct: 88 TGPTYGSMIWGTAAGAIVAAVFALAIGLFSLRVKAIFFAMVTLAIASAFAVLVSQLSWLT 147 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G+ G+ + F + F + ++ +YY++ + +L + + Sbjct: 148 GGEDGLNYSIPREFKPAFKLVDEKIFDVRING---KLLLYYLVFFASLILFLTMLRIVNS 204 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKF 263 + +RDN ++ +++ + +A +S+ +AG+ A P Sbjct: 205 PFGRTLKAVRDNAFRAEAIGYRVVWYRTTATVLSAVMAALAGSLLAIWLRYTGPATTLSM 264 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM----NFYYFNSLLKFDCSFNMR 319 I ++ +V++GGM +L I I + L R Sbjct: 265 EIMIDILLMVVIGGMGTLYGAVIGATIFILAQTYLQNLMGVAAEATSAIPLVSTLVAPER 324 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 + + L + ++ Sbjct: 325 WLLWLGVLFILSVYFFPSGIVGR 347 >gi|6690693|gb|AAF24261.1| Orf405 [Rhodobacter sphaeroides] Length = 405 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 29/300 (9%), Positives = 73/300 (24%), Gaps = 13/300 (4%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107 IY + A GL+I G + ++++ +GAY+ ++ ++ + Sbjct: 117 IYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWISDYTISILVALPLAFDRHL 176 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + + +L L + + K Sbjct: 177 RVPASTMERLVIRHLYRRPLAKNAAGHVRHLHRAAAARPKNIFRHPGPASSTAPAWLDER 236 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + + + + S+ Sbjct: 237 AEASNDVVSIQLHHASRSSSSQRSSIGVFPLHHDAHPPRARGAGGNSRTPTMAASMGINP 296 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + S G+AG + V++GG+ ++ Sbjct: 297 DRINMLTFGLGSGIAGIAGVAIGLFAKVTFELGQDYIVQS--FMTVVVGGVGNIWGTLAG 354 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 A++ GV + +N + + F + R ++ L+ + Sbjct: 355 AAMIGGVQKGIEWLNPLNTLAAQTYMILFIIIFIQF-----------RPRGIVALKGRAA 403 >gi|257092808|ref|YP_003166449.1| urea ABC transporter permease UrtC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045332|gb|ACV34520.1| urea ABC transporter, permease protein UrtC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 388 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 98/348 (28%), Gaps = 32/348 (9%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 L+AV L + ++ +IL Y + A + ++ G G+LSL + Sbjct: 30 AAFALVAVPVMHLALPPDHPLHLSTWFITLVGKILCYAIVAVAMDLIWGYGGILSLGHGL 89 Query: 73 AYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 +A+G Y++ + W +P S + + L + Sbjct: 90 FFALGGYAFGMYLMRQIGRDGSYQSDLPDFMVFLDWKELPWFWAGSDSFLWVALLVLVVP 149 Query: 118 RGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 +I + + + R + Sbjct: 150 AVIAFVFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRILGYSI 209 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + + ++ + + + +L + IRD + + ++ KL Sbjct: 210 TAPETRVVLFALSALALIGTLLLARYLVTSKFGRVLTAIRDAESRVMFIGYNPLWYKLFV 269 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 + +S+ AGA + I+P + +I + V +GG +L I+ Sbjct: 270 WTLSAMLCAFAGALYVPQVGIINPSEMSVANSIEIAIWVAVGGRGTLIGPVIGAFIVNLA 329 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F SF + + L ++ L Sbjct: 330 KSW--------------FTVSFPEYWLFFLGTLFIVATLYLPQGVVGL 363 >gi|296129816|ref|YP_003637066.1| inner-membrane translocator [Cellulomonas flavigena DSM 20109] gi|296021631|gb|ADG74867.1| inner-membrane translocator [Cellulomonas flavigena DSM 20109] Length = 462 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 95/309 (30%), Gaps = 28/309 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I ++ + + G +++ G+ GL + +G + + R+GL +WL I V Sbjct: 178 VLAGTIFGVLLALASLGANLIYGTTGLSNFAHGELVTLGGMTAFLAVQRWGLPLWLAIVV 237 Query: 99 SAMISGACGMI--MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 S + G G + + + R +I++ ++ G + + Sbjct: 238 STVAGGLVGWLLNQLIFAPLRRRGVGVTQQMIVTIGLSLAMLSGFLFAFGARPAPIVSGI 297 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 R V + + ++ + L RT + A R + DN Sbjct: 298 S------------QRMQIGPVQISGQSLVSVGIAVVVLTAVAVVLSRTRLGRATRAVSDN 345 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + + VS + G A + + F + +++ + + LG Sbjct: 346 PALAAATGIKVESVISRVWVVSGGLASLGGVLLALYLNT-TRFNFGSTLLLLMFAAITLG 404 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S ++ VVEL + + R Sbjct: 405 GLGSPLGAVLGALVIGLVVELSTLVLPSDMRYASALVILILVLLL-------------RP 451 Query: 337 HSLLRLRTP 345 +L Sbjct: 452 QGILGRAER 460 >gi|33595272|ref|NP_882915.1| putative branched-chain amino acid transport system permease [Bordetella parapertussis 12822] gi|33599563|ref|NP_887123.1| putative branched-chain amino acid transport system permease [Bordetella bronchiseptica RB50] gi|33565349|emb|CAE36152.1| putative branched-chain amino acid transport system permease [Bordetella parapertussis] gi|33567159|emb|CAE31073.1| putative branched-chain amino acid transport system permease [Bordetella bronchiseptica RB50] Length = 345 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 122/325 (37%), Gaps = 24/325 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + +++ + A Y + L+ A +++ G G +SL + +AIG+Y Sbjct: 19 IAALVVVAAAVAAPWMNPYYTRVMTMGLMCGYLAASWNLIGGYAGQMSLGHALFFAIGSY 78 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNIL 137 S +L + + P++ ++S I+ + RG Y A+ TL+++EI + ++ Sbjct: 79 SVALLARMPDVPLVAAFPLAILVSVGLAWIIATICFRYALRGIYFAVGTLLLAEIARILV 138 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + + + ++ +Y+ LG+ A Sbjct: 139 INSDVL---------------GRSQGLQIPGMQGALNFSFGSDLPFFYIFLGISIALALG 183 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L R + +R+ ++ +L + K AF +S+A + G +A + Sbjct: 184 SLALERCKLGYDLVALREQEEGAQALGVDVAAIKRLAFVLSAALTCVGGVIYAGLVRYVE 243 Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P S + ++ +LGG + +++ V E + + + S Sbjct: 244 PGYDLSLSITLFMVMGAVLGGRGTALGPFLGGVVMVIVQETLITVGSAFGTT------SV 297 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + + +++L+ ++ Sbjct: 298 SALAQMIYGLFFVVILLVFPRGIVG 322 >gi|302188758|ref|ZP_07265431.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642] Length = 359 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFLATVALLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ + Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352 >gi|270284573|ref|ZP_05966356.2| putative Branched-chain amino acid transport system, permease component [Bifidobacterium gallicum DSM 20093] gi|270276463|gb|EFA22317.1| putative Branched-chain amino acid transport system, permease component [Bifidobacterium gallicum DSM 20093] Length = 448 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 85/301 (28%), Gaps = 28/301 (9%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 L+ + + G++++ G+ GL S + +G + + IWL + +I Sbjct: 172 LMLALMSVGMNLIYGTTGLSSFSHGEQVTLGGLMAYLGAQVMHMPIWLAAVFAIVIGALT 231 Query: 107 GMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 G I + + + +I++ L G Sbjct: 232 GFIEDVLIWGPLRKKRIGPLQQMIVTIGLSMALQYLFQCFFGGD------------IKGI 279 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + + + A + +L RT + A R + DN + Sbjct: 280 TKSIPEAIQIGPITTNAPSLLAAAIAIIVIAGVTFFLYRTRLGRATRAVSDNSALAAASG 339 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + + ++ ++G + IS + + +++ + V LGG+ + + Sbjct: 340 INVNRVVRVVWTLACGLAALSGVLMGIYLNGISWNT-GATLLMLMFAAVTLGGLGTANGA 398 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + ++ V ++ + R + + Sbjct: 399 LVGSLVIGIVADMSSLFIPSDMRYASALAILIIVLLI-------------RPQGIFGKQQ 445 Query: 345 P 345 Sbjct: 446 R 446 >gi|94986131|ref|YP_605495.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300] gi|94556412|gb|ABF46326.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Deinococcus geothermalis DSM 11300] Length = 318 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 109/286 (38%), Gaps = 15/286 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 L+ + + + + IL + +FA ++ G GLLS + AY Sbjct: 19 AAWLIGLGIVLLILPRLIYPVLALDILAWGLFAVAFDLLFGFSGLLSFGHAAFWGTSAYV 78 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L + + + + +G S++ G Y ++ TL +++ + ++W Sbjct: 79 TAFLLGHGQSVP-VALLGGTGSALLIALPIGFLSVRSIGIYFSMITLAFAQMLSFVALQW 137 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G+ G+ R FLG YY L + L + Sbjct: 138 TDVTGGENGLQGLARPGFLGLDFSDATT--------------RYYFCLVLFALGFYVAYR 183 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 R+ A + +RDN++ S+ K +AF +S+ G+AG+ F +S D+ Sbjct: 184 TVRSPFGQALQAVRDNEQRAQSIGYNPQRFKFTAFLISATLAGLAGSMFTFGHGVVSLDV 243 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + + V+ + +LGG T+L +++ + ++ N Sbjct: 244 LNWRTSGEVVMMTLLGGTTTLFGPVIGAGLVLLLRDVLTTANLPVG 289 >gi|300710023|ref|YP_003735837.1| inner-membrane translocator [Halalkalicoccus jeotgali B3] gi|299123706|gb|ADJ14045.1| inner-membrane translocator [Halalkalicoccus jeotgali B3] Length = 349 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 3/303 (0%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + L + Y + L+Y + L ++ G G+LS V + IG Sbjct: 21 AGFGLAVFALLGYPLVASTYAVANAALFLLYAILGLSLCVIWGYCGILSFGQVAFFGIGG 80 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y++ I+G I + +++G + L + Y + + ++ + + + Sbjct: 81 YTFGIVGINLTGGIGPTLG---LLAGIGVATLFAFVLGYFMFYGGVRDVYVTIMTLVVAL 137 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG A LG + + YYV+L + + Sbjct: 138 VIHTFMGQTAGSEWAIGEAALGGFDGMTNIPNLAVGGVELIDTAFYYVVLLALLGTYLGL 197 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + A +R++++ L KL F + G++G +A+ + ++P Sbjct: 198 RALVNSDFGRAMVAVREDEERTELLGYDTKRIKLLVFTLGGTLAGLSGVLYASWGNYMNP 257 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +F + + + V +GG SL AT + + Y ++ + Sbjct: 258 AVFGITFAALPVVWVSVGGRDSLLGAIGATYAVEWFSQQLSITGNEYALVVVGGLLLVTI 317 Query: 319 RHT 321 Sbjct: 318 LWL 320 >gi|190893260|ref|YP_001979802.1| branched-chain amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190698539|gb|ACE92624.1| probable branched-chain amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 333 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 57/335 (17%), Positives = 118/335 (35%), Gaps = 28/335 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA + ++ +G + ++ +++ + L +V G G+ +L + G Sbjct: 23 LAGIMVIIAVAAVGYFAFPDNL-ALLTRMITIALLVLSLDLVTGYCGVATLGHAALFGSG 81 Query: 78 AYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY+ IL + Y L++ A G++ G L+ G + ++ + +F Sbjct: 82 AYAAGILSAHYGVNDPLLMLLAGIAGGAASGLLSGAIILRAHGLPQLVLSIALIHLFHEF 141 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 K T G G+ G F +Y ++ + + + Sbjct: 142 ANKASSWTGGSDGLSGIAPDPIFGL------------FEFDLYGQTAFFFGTALLLVVFA 189 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ L R+ R IR + ++ + A + + +S A G+ GA A S + Sbjct: 190 LLRLLVRSPFGMLCRGIRQDPLRIRAMGGSPKAALIRMYVISGAVAGVGGALNAISTQVV 249 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 D F+++ + +++LGG SL T I + + N +++ Sbjct: 250 GLDSLSFTQSAEALVMLVLGGAGSLFGALSGTIIFMLFEDYVSAANPFHW---------- 299 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T++ L V+L L R Sbjct: 300 ----LTMVGALLIAVVLFAPKGLYGTAAALIVRRR 330 >gi|27375994|ref|NP_767523.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27349133|dbj|BAC46148.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 373 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 108/322 (33%), Gaps = 13/322 (4%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSR 87 ++ +I ++ +++G G +S + Y IG+Y+ I Sbjct: 41 PFLFPGAKALNVAAKICVFAALVASYDLLLGYTGSVSFAHTMFYGIGSYAIAIALYGMGP 100 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 ++ I V ++ + +GL SL+ + A+ TL ++ FQ + + +T G+ Sbjct: 101 NWAAVATGIVVGLPLAALLALAIGLFSLRVAAIFFAMITLAVASAFQVLASQLSWLTGGE 160 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G TV F F + I YY++L + L +L + + Sbjct: 161 DGRSFQLPELLRPGTVLISRNLFGFEVNG---RILTYYLVLAISALMILALLRVVNSPFG 217 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI-SPDMFKFSEN 266 + IR+N+ +L +F A +++ AG A FS Sbjct: 218 RVLQAIRENRFRAEALGFRTVFHLTYANCLAALVAASAGILNALWLRYAGPDTSLSFSIM 277 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGM------NFYYFNSLLKFDCSFNMRH 320 + ++ +V++GGM ++ I I + L R Sbjct: 278 LDILLMVVIGGMGTIYGAIIGATIFILAQNYLQSLMGVASKAASEAGLPLLPGLLHPDRW 337 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 + + + ++ Sbjct: 338 LLWLGLLFIASVYFFPTGVVGR 359 >gi|312875931|ref|ZP_07735921.1| inner-membrane translocator [Caldicellulosiruptor lactoaceticus 6A] gi|311797412|gb|EFR13751.1| inner-membrane translocator [Caldicellulosiruptor lactoaceticus 6A] Length = 312 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 73/338 (21%), Positives = 136/338 (40%), Gaps = 42/338 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K + + +V L++ L + YI I++ ++ A L+++ G GL S Sbjct: 1 MKKRLLVYSVFVIVLYLIITLLMKMGIIDDYIKLNLFLIMLNIILAVSLNLINGITGLFS 60 Query: 68 LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L AIGAY+ + + +L + + + + CG+I+GLP L+ RGDYLAIAT Sbjct: 61 LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGLIIGLPVLRLRGDYLAIAT 120 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + I+ + G +GI + Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + LS +IL + ++ A IR+++ A ++ K+ AF + + F G+AG Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + ++ S I PDMF F ++I ++ IV+ + ++ Sbjct: 215 SVYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + L + L +++L R L+ + Sbjct: 260 TIISALLQDYPAVRMVLYALILIIIMLFRPQGLMGTKE 297 >gi|157369666|ref|YP_001477655.1| inner-membrane translocator [Serratia proteamaculans 568] gi|157321430|gb|ABV40527.1| inner-membrane translocator [Serratia proteamaculans 568] Length = 358 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 102/344 (29%), Gaps = 27/344 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L ++ L L Y ++ +IL Y + A L +V G GLLSL + + Sbjct: 25 LLVLLIMPFLALLPADHPLAISTYTLTLVGKILCYAVVAVALDLVWGYAGLLSLGHGLFF 84 Query: 75 AIGAYSYVIL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 A+G Y+ + S + ++ L + Sbjct: 85 ALGGYAMGMYLMRQAAGDGLPAFMSFLSWNELPWFWSGTQYFAWALCLIVLVPGVLAFVF 144 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 A + ++ G + + + FP + + Sbjct: 145 GYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRV 204 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 ++ + + S +I L R+ +RD + KL + +S+ Sbjct: 205 ALFVTTVLLLAASLAIGFALARSKFGRVLTAVRDAENRLTFCGYDPKGFKLFVWTLSAVL 264 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA + I+P + +I V LGG +L I+ G Sbjct: 265 CGLAGALYVPQVGIINPGEMSPTNSIEAAIWVALGGRGTLVGPLLGAGIVNGAKSW---- 320 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + + +V L ++ L Sbjct: 321 ----------FTMAIPEYWQFFLGLMFIVVTLFLPKGVIGLLRR 354 >gi|299541878|ref|ZP_07052201.1| high-affinity branched-chain amino acid transport system permease protein [Lysinibacillus fusiformis ZC1] gi|298725616|gb|EFI66257.1| high-affinity branched-chain amino acid transport system permease protein [Lysinibacillus fusiformis ZC1] Length = 291 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 100/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ + IG++ +++ L + + + Sbjct: 7 LVNGISLGSIYALIALGYTMVYGIIKLINFAHGDVFMIGSFIGFYAIAKWELGFFPALLL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+++ + K + IA LI + ++ G Sbjct: 67 AMLVCAIFGVLIERIAYKRLRNATRIAALITAIGVSLLIEYTTIFFRGAQPAAYP----- 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + V +L L + + +T I A R + + Sbjct: 122 ------EVFKNKSLDVFGVQISSTSILILSVAVVLMILLQFIVHKTKIGKAMRAVSHDAD 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + FA+ SA G AG F +I P M + +LGG+ Sbjct: 176 AARLMGINVDNTISATFAIGSALAGAAGVIFGVYYTKIDPLM-GVIPGVKAFIAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + +L V L + F + F + L L+++ R Sbjct: 235 GIIPGAMVGGMLLGVVESLVSALGFSLWRDAAAF-------------VILILILIFRPSG 281 Query: 339 LLR 341 + Sbjct: 282 IFG 284 >gi|121606098|ref|YP_983427.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120595067|gb|ABM38506.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 309 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 101/305 (33%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + + ++ Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGWMQEAMPGAPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + +L F + +A L S ++ + + + + Sbjct: 68 LVLLISLLIAFVVCAALNFTIEKVAYRPLRNSPKLAPLITAIGMSLLLQTLAMIIWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +L+ F + + ++L + ++ + T + A R +N + Sbjct: 128 --KSYPTLLPAEPFQIGGAVITVTQLFILGTTAVSLSVLMWLVHYTKLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ + M F + + + GG+ Sbjct: 186 VAALMGVRPDTVISATFIIGAILAALAGVMYASNYGTVQHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + + G +L + I L V+ +R Sbjct: 245 GNLGGAVLGGILLGLIEAIGAGYIGPLTGGVLG-----SQYSDIFAFIVLIFVLTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|83720104|ref|YP_442048.1| branched-chain amino acid ABC transporter permease [Burkholderia thailandensis E264] gi|167580887|ref|ZP_02373761.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|257138230|ref|ZP_05586492.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83653929|gb|ABC37992.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 401 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 58 IAVGIGVPLAALVAPESSAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 117 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 118 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLAPA 177 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 178 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 237 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ + S + + + IRD + L + + KL + Sbjct: 238 SPGTRCALFLITFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 297 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P + +I + V +GG +L + G Sbjct: 298 VVSAVLCGIAGALYVPQVGIINPSEMSPANSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 357 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 358 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 390 >gi|56698527|ref|YP_168903.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56680264|gb|AAV96930.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 350 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 126/342 (36%), Gaps = 12/342 (3%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ L + L+ +I ++++ +++G G++S Sbjct: 12 RSLVLALILGLILVCLALAPFLFPGVRTVDTAARICVFIVLVASYDLLLGYGGIVSFAHT 71 Query: 72 IAYAIGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + + IGAY + + G + SA+++ A ++GL SL+ R + A+ TL Sbjct: 72 MFFGIGAYGVALALTHLGRGFDAILVGAGASALLAAALAFVIGLFSLRVRAIFFAMITLA 131 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 ++ ++ + +T G+ G+ F + ++ YYV+ Sbjct: 132 VASAVAVLVSQLSGLTGGEDGLTFKTPRALGPAFKFGDELF----GVKLNGKLLSYYVVF 187 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + ++L + + + IR+N ++ +++ +++A +S+A +AG+ Sbjct: 188 IGSLVLFLLMLRVVNSPFGRVLQAIRENDFRAEAIGYRVVYYRVAATCLSAAVAALAGSL 247 Query: 249 FAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 +A + PD I ++ +V++GGM ++ +L+ + + Sbjct: 248 YAIWLRYVGPDTTLSMEIMIDILLMVVIGGMGTMYGAVIGATLLVLAQNYLQNLMGVAGS 307 Query: 308 SLLKFDCSFNMR----HTTLMVIALFLVILMRSHSLLRLRTP 345 + + + + L + ++ Sbjct: 308 LVDGVPVLPQLLDADRWLLWLGVLFILSVYFFPTGVVGRLRR 349 >gi|146340683|ref|YP_001205731.1| ABC transporter [Bradyrhizobium sp. ORS278] gi|146193489|emb|CAL77505.1| conserved hypothetical protein; putative membrane protein; possible ABC transporter [Bradyrhizobium sp. ORS278] Length = 322 Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 106/289 (36%), Gaps = 17/289 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++A V L + T + +Q L + + A ++++G GLLS + Sbjct: 20 MIAFVIMAALLAIVPFTGLYPFFV---MQALCFALLACAFNLLIGYGGLLSFGHAMFLGT 76 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 Y +G L I + ++ G S++ +G Y ++ TL +S++ + Sbjct: 77 AGYCSAHALKVWGFPPELGILTGIAGAFVLSIVTGYISIRRQGIYFSMITLALSQLLYFV 136 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ ++ + + F + +YYV+L Sbjct: 137 YLQ--------------TPFTHGEDGIQGIPQGKLFGFIDLSKPFTLYYVVLVGFLAGFL 182 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 +I + ++IR+N++ SL KL AF +S G AG+ Sbjct: 183 LIFRTINSPFGEVLKSIRENEQRAISLGYKTDQYKLLAFILSGTIAGFAGSLKVFVAQNA 242 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 S +S + ++ + ++GG+ ++ ++I + + G + Sbjct: 243 SLTDVHWSMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGFGQWV 291 >gi|226356147|ref|YP_002785887.1| branched-chain amino acid ABC transporter permease [Deinococcus deserti VCD115] gi|226318137|gb|ACO46133.1| putative branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] Length = 334 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 133/351 (37%), Gaps = 38/351 (10%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ S+ + + + + ++L + + GI L++ A +I+ Sbjct: 1 MTASSVSVARPRALTFGNVWLSAVILAVLFIYPFVFGKTMNFGISTLLFAGLAMSWNILG 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSR--------YGLSIWLLIPVSAMISGACGMIMGL 112 G G SL IGAY+ +L + ++ W + ++ A + G Sbjct: 61 GWAGQTSLGHAALLGIGAYTMTLLATPERVPALFGGPVAPWWGTLIGMALAVALAAVWGA 120 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 + + RG Y ++T+ ++ + + + I + T G G+++ + F G + Sbjct: 121 LTFRLRGSYFTLSTIAVALVIRLVAINSEW-TGGSEGLFMPELPRFFGLDLFDRR----- 174 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 Y++ L+ + +RR+ + A + +R+++ +L KL Sbjct: 175 ---------VEYWLSFAFVVLTLLVTHLIRRSRLGYALQAVREDEDGARALGIDPTRMKL 225 Query: 233 SAFAVSSAFIGMAGAFFAASRD-RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 AF +S+A + GA +A + + ++ + + I+GG TS+ +L Sbjct: 226 IAFMISAALTALGGALYAIYLQAFEPHTLLELPISVQIALMAIIGGRTSIQGPLIGAVLL 285 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 E+ + F+ + + + + LV L + ++ L Sbjct: 286 ATFGEVFRNV--------------FSSANLLIYGVLILLVTLYAPNGIMGL 322 >gi|17548236|ref|NP_521576.1| amino-acid transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17430482|emb|CAD17166.1| probable amino-acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 299 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 118/302 (39%), Gaps = 41/302 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ + + I + A + + + S GLL++ IGAY+ +L + + + Sbjct: 11 YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+G P+L+ G YLA+ATL E+ + +++ + T G G+ +L Sbjct: 70 GMLAPAVVAVIIGRPTLRLSGVYLAMATLGFGEVVRVLILNTESWTGGALGLNGIPQLTE 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L+ ++ LRR+ + A+ I++++ Sbjct: 130 WWH-------------------------VALAVALTLFVLARLRRSKVGRAFEAIKEDET 164 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + KL AF + + G+AGA A I P F F + ++++ ILGG Sbjct: 165 AAGLMGINVAGTKLLAFVLGAMIAGLAGALNAHLTFFIGPAEFGFDRGVEILTMAILGGT 224 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L+ + IL + EL + + + L L++L Sbjct: 225 NGLTGPVLGSVILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269 Query: 339 LL 340 + Sbjct: 270 IW 271 >gi|254431008|ref|ZP_05044711.1| urea ABC transporter, permease protein UrtC [Cyanobium sp. PCC 7001] gi|197625461|gb|EDY38020.1| urea ABC transporter, permease protein UrtC [Cyanobium sp. PCC 7001] Length = 375 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 103/353 (29%), Gaps = 42/353 (11%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 RL ++ L ++A L L + ++ + L + A G+ ++ G G+L Sbjct: 3 RLRQWLPWLLIIAAGLILPAVL-------PPFRLNLLGRFLSLGIVALGIDLIWGFTGML 55 Query: 67 SLNCVIAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGM 108 SL I +A+G Y+ + G + + W + Sbjct: 56 SLGQGIFFALGGYAIGMYLQLKSLAPGQLPEFFGLYGVQELPAFWKPFGSPLFTFFCIWV 115 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + L + + + + L R Sbjct: 116 LPALVAGVLGYLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLK---TDTAR 172 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 F + ++++V L + S + WL R +A IRD++ Sbjct: 173 IFGQLVGSDGMQRWLFWVTLLLVVASWLLCRWLTRGRFGDALIAIRDDEPRLRFTGYNPT 232 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 K FA++ A G++GA + ISP +I ++ V +GG +L Sbjct: 233 AYKTVVFAIAGALAGVSGALYTVQSGIISPQFMAVPFSIEMVIWVAVGGRGTLIGAVLGA 292 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ L + LV+ L+ Sbjct: 293 VLINYAKSLVSE--------------QLPETWLFIQGGLFLLVVTALPDGLVG 331 >gi|237653793|ref|YP_002890107.1| branched-chain amino acid ABC transporter permease [Thauera sp. MZ1T] gi|237625040|gb|ACR01730.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 322 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 67/331 (20%), Positives = 129/331 (38%), Gaps = 26/331 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L+ +L L L + + +IL+ +FA L+++VG GL+SL + Sbjct: 5 VVLSFKLAVLAGLVLFPAIGSSFYVELVAKILVMSIFAMSLALLVGFTGLVSLGHAAYFG 64 Query: 76 IGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 I AY+ ++ Y ++W ++ S + +GA +GL L+ +G Y + TL +++ Sbjct: 65 IAAYTVALIAPEYEAANLWFVLAASVLAAGAAAFFIGLFVLRTKGIYFIMVTLAFAQMAY 124 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + F + + + +YY +L Sbjct: 125 YIFHDTALGRSSDGIYLNVKP----------DASLFGWMPFNLDEPLHLYYFILAAMVAV 174 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ ++ R+ I N+ SL KL+AF ++ A G+AG +A Sbjct: 175 FVLLAFVLRSPFGRVLAGIHSNEHRMKSLGYATQRYKLAAFTLAGALAGVAGFLYAVLFG 234 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++PD + ++ V+ +VILGG+ SL+ IG+ E+ ++ Sbjct: 235 FVTPDYLSWHQSGNVLLMVILGGLGSLAGAVAGAFAFIGLQEMFSDWTKHW--------- 285 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 LM + + +L L L Sbjct: 286 ------QLLMGLVIVAAVLFMPSGLAGLPRR 310 >gi|116053008|ref|YP_793326.1| putative branched-chain amino acid ABC transporter, permease protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115588229|gb|ABJ14244.1| putative branched-chain amino acid ABC transporter, permease protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 529 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 31/295 (10%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLP 113 I G LG++++ +GAYS ++ + + L ++ ++ +G+ Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYSTYVVQLLFQRLAPEWLALYPLLALPVAFCVSAAIGMA 315 Query: 114 SLKFRGDYLAIAT---LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 + +L L+ + +LI+ + G + VA+ + Sbjct: 316 LERTVIRHLYGRPLETLLATWGISLVLIQLVRMLFGAQNVEVANPA---------WLSGG 366 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 ++ ++ F+ L L RT + R + N+ Sbjct: 367 IQVLPNLVLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRV 426 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 + AF + S G+ G A S+ I +V+LGG+ L+ A Sbjct: 427 DMLAFGLGSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFG 484 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ L++ + L I R L L+ Sbjct: 485 LGVANKILEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFALKGR 526 >gi|56752210|ref|YP_172911.1| neutral amino acids ABC transporter permease [Synechococcus elongatus PCC 6301] gi|56687169|dbj|BAD80391.1| ABC-type Nat permease for neutral amino acids [Synechococcus elongatus PCC 6301] Length = 359 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 120/360 (33%), Gaps = 51/360 (14%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 YI + I ++ +F GL++ G GLL+ V IGAYS +L + +WL Sbjct: 4 YIILLVCTIALFALFYVGLNLHWGYTGLLNFGHVAFLLIGAYSVSLLAQQGWP-LWLAAI 62 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ G++MG+ SL+ DYL I T+ ++E+ + + +T G G+ + Sbjct: 63 AGVTLAALLGLVMGVASLRLSQDYLGIVTVGLAEVLRIFVQNETGLTQGSFGVQAYPIIL 122 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG---------------------------- 189 + + Sbjct: 123 QGWEPPIWQTHLLVVGLLAIAAWGYWQLWQWWRSSASRGKHWLAIVALGSSLIVLPPAAL 182 Query: 190 -------------------MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 +L+ + + L R+ + IR+++ +L ++ Sbjct: 183 GLADYERYPRSGQMLLLLGALWLTVAAVDRLVRSPWGRVLKAIREDETVAIALGKNVLSY 242 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 KL + A+ A G+AG F+A I PD F+ V ++++LGG A+ Sbjct: 243 KLQSLALGGAIAGLAGVFYAWQLTAIYPDNFRPQLTFDVWTMLVLGGTAHRFGPVLGAAV 302 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L + L+ + L +++ R +L R + Sbjct: 303 FWLYDSLTRFLLPAILPLD---GSQIGALRIALVGLLLMALMIWRPQGILGRREELSLGR 359 >gi|149203612|ref|ZP_01880581.1| probable branched-chain amino acid transport system, permease component [Roseovarius sp. TM1035] gi|149142729|gb|EDM30771.1| probable branched-chain amino acid transport system, permease component [Roseovarius sp. TM1035] Length = 334 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 115/312 (36%), Gaps = 28/312 (8%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 A ++ + + +ILI M L +V G G++SL +GAY Y IL ++ G Sbjct: 21 FQAFTAEYFGLEILTEILILAMLVIALDMVAGFGGMVSLCHGALLGVGAYGYAILSTKVG 80 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L+ + + I+GA ++G + G Y +ATL ++ G + Sbjct: 81 LTPVAAMGGAVAITGAIAWVIGAICARSHGIYFIMATLAFGQM-------------GYSY 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 ++ A + L M + + R+ + + Sbjct: 128 VFEAPLFGGDDGLGGIERLDLALIGLDLNDGRSFALFCLAMLAAIYGAAVLILRSGLGRS 187 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + N++ +L T+ K F +S G+AG A +SP + ++ + Sbjct: 188 LSGVMHNEQRMRALGLTVWRVKADVFGLSGLISGLAGVMAAQHVMFVSPGLLSWTVSGEA 247 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +VILGG+ +L A+ + + + Y+ ++ + L Sbjct: 248 LVVVILGGLGTLVGPLLGAAVFVLLKHEVGALTSYWH---------------LVVGVILI 292 Query: 330 LVILMRSHSLLR 341 V++ R++ + Sbjct: 293 AVVMSRANGIFG 304 >gi|255659025|ref|ZP_05404434.1| amino acid ABC transporter, permease protein LivH [Mitsuokella multacida DSM 20544] gi|260848810|gb|EEX68817.1| amino acid ABC transporter, permease protein LivH [Mitsuokella multacida DSM 20544] Length = 295 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 95/303 (31%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G + L++ Y +GAY ++ LSI + + Sbjct: 11 LINGISLGSIYALIALGYTMIYGIIKLINFAHGDIYMVGAYIGFFAITQAHLSIVPSLLI 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S +++G GM++ + K I+ LI + L Sbjct: 71 SLVVTGFLGMLVERLAYKPLRHAPRISVLITAIGVSFFLEYTTMYFVSPT---------- 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T ++ ++ +L L + +++T A R + + Sbjct: 121 -PRTFPAMFGDVAVTVGGIVINGQQMLILGITAVLMVILTYIVQKTKTGKAMRAASFDTE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + SA +AG + I P M + +LGG+ Sbjct: 180 TAELMGINSDRIISITFGIGSALAAVAGVLVGIYYNSIDPLM-GIMPGLKAFVAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L IL V L G F F L LV+L+R Sbjct: 239 GILPGAVVGGLILGVVEALVSGFISSTFRDAAAF-------------AILILVLLVRPAG 285 Query: 339 LLR 341 + Sbjct: 286 IFG 288 >gi|188580548|ref|YP_001923993.1| urea ABC transporter permease [Methylobacterium populi BJ001] gi|179344046|gb|ACB79458.1| urea ABC transporter, permease protein UrtC [Methylobacterium populi BJ001] Length = 373 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 94/341 (27%), Gaps = 30/341 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + A S ++ + IY M A +S+ G G+L+L IA+ + Sbjct: 15 AVYGLFFVAIAGIPAFVSDGFLLNQFAVYGIYGMLALSISLCWGFGGILNLGQGIAFGLA 74 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY + M++ + + + + LI+ +F + Sbjct: 75 AYGMAMTMQMQSQDPDSNPIPPFMLNNSLEHLPWFWQPFWSTGGGILLALIVPTLFYVVF 134 Query: 138 IKWKPITNGKAGIYVAD----------------RLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + F + Y Sbjct: 135 GTLMFRARVSGPFFAIMSLAMLSAFATLILDMQPYTNGANGISPPSPLSLFGTDIDPYGP 194 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 Y+++ G+ L ++ + +R + + L + + +A+S Sbjct: 195 TAYWIVCGLLIAVTVGAKLLTQSKFGLVIQALRGDPERVRFLGYNVALYETCIYAISGFI 254 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 +AG + +SP + +I ++ +GG SL ++ G Sbjct: 255 AALAGCLWVMLIQYVSPAQLDTTFSIGMVIWAGIGGRLSLLGAILGAFLIQGGQSYL--- 311 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F ++ +V+ L L Sbjct: 312 -----------GDQFLATWLLVLGAFFIVVVRFLPKGLAGL 341 >gi|86160676|ref|YP_467461.1| chain amino acid ABC transporter inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85777187|gb|ABC84024.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Anaeromyxobacter dehalogenans 2CP-C] Length = 310 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 98/311 (31%), Gaps = 21/311 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLS 91 + + IY + A G ++V G L L++ Y +GA++ LGS + Sbjct: 8 LVNGLSLGTIYALIALGYTMVYGVLKLINFAHGDVYMVGAFAGYYLGSVTGTDRAPGMVG 67 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L+ + + GA G ++ + + + + LI + +L ++ Sbjct: 68 AALVTLGAMAVCGALGYVIERFAYRPLRNRARLTALITAIGVSFLLEYGFQLSPIVRTPV 127 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 L V L+ L + L + RT A R Sbjct: 128 EFPPGPSPRFFPALLELGEPLTFLGVTVPRIDLLGLVVALVLMIGLQLIVYRTRFGMAMR 187 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 + + + + F + SA AG A+SR +I +F + Sbjct: 188 AASFDPQVAGLMGIPVNRIISWTFVLGSALAAAAGIINASSRPKIE-PLFGLMSGLKAFV 246 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +LGG+ S+ +L E G + + F L LV Sbjct: 247 AAVLGGIGSVPGAMVGGLVLGLTEEYVAGYTSSQYRDAIAFT-------------VLILV 293 Query: 332 ILMRSHSLLRL 342 +L+R L Sbjct: 294 LLVRPEGLFGR 304 >gi|229096479|ref|ZP_04227450.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock3-29] gi|229115452|ref|ZP_04244858.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock1-3] gi|228667865|gb|EEL23301.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock1-3] gi|228686685|gb|EEL40592.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock3-29] Length = 333 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 60/334 (17%), Positives = 131/334 (39%), Gaps = 31/334 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V+ L+ + + + QI I+ +FA I++G G++S + + IGAY Sbjct: 15 VFMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDILLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + ++ I + ++S I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFFIGIIAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV + Sbjct: 135 EKWRGLTHGGDGFTFGVPEIFRDRF-------------------TFYYVTFICLINIFIL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R T ++ + +V+L+ L+ ++R Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKQLKSVKR 320 >gi|220916922|ref|YP_002492226.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] gi|219954776|gb|ACL65160.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] Length = 313 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 106/301 (35%), Gaps = 29/301 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + +L +FA ++++G GLLS AY+ +GL + + + Sbjct: 28 FAMNVLCLALFASAFNLLLGYTGLLSFGHAAFLGASAYATGWALRSWGLPPEVAVLLGTA 87 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 ++ A G++ G +++ G Y A+ TL +++ ++++ T G+ G+ R Sbjct: 88 LAAALGLVFGALAIRRSGIYFAMITLGFAQLVYFLVVQLPW-TGGEDGLQGIPR------ 140 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + Y+ + ++ + + R IR+N+ Sbjct: 141 -------GRALGLIPLDDPRTAYWFVYAAFLAGFWLLHRAIHSPFGHVLRAIRENEPRAV 193 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+ G+AG A S + + V+ + +LGGM ++ Sbjct: 194 SLGYDVARYKLLAFVLSAGVSGLAGGLKAVVLQFASLSDVHWHRSGEVVLMTLLGGMGTV 253 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +++ + T + ++ ++ Sbjct: 254 LGPSVGALLVVALENYLA---------------DTGSWVTVITGAVFVACVVAFRRGIVG 298 Query: 342 L 342 Sbjct: 299 E 299 >gi|150017621|ref|YP_001309875.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] gi|149904086|gb|ABR34919.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] Length = 294 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 92/305 (30%), Gaps = 23/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G + L++ Y +GA+ + GL + Sbjct: 8 IVNGICLGSVYALIAIGYTMVYGIIKLINFAHCDIYMVGAFLGYFAATVLGLGFIPSLIF 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + GM++ + K + + LI + + IL + Sbjct: 68 SMVSCAVLGMLIERIAYKPLRNSPNVTLLITTMGMELILQNFVKADFVAGPN-------- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I + + L L ++ + +T A R ++ Sbjct: 120 -TRNFPEVIPLISYKIGAITISNLQIIALAITIILCVALQYLVNKTRTGRAMRATSYDRD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I FA+ SA AG R+ P M + +LGG+ Sbjct: 179 AAALMGININRVISLTFALGSALAATAGVLVGMLYPRLEPAM-GVMPGLKSFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + + L + + F L ++++++ Sbjct: 238 GIIPGAMFGGLAMGLIETLSKVYISSGLSDAIAFS-------------ILIIILIVKPTG 284 Query: 339 LLRLR 343 L + Sbjct: 285 LFGKK 289 >gi|121610871|ref|YP_998678.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gi|121555511|gb|ABM59660.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 625 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 108/337 (32%), Gaps = 10/337 (2%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 +++ L + L L L + + I +Y + A GL ++ G G+ S Sbjct: 15 SRFMHRLTRARLTLAALALLVLCWGWLPDFSVVLLCHIALYALVALGLVLLTGIGGMTSF 74 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 IGAY+ + + WL V G+ +GL L TL Sbjct: 75 GQAAFVGIGAYATAWVCTAPAPVQWLAGAVGMAGLPWVGLALGLALTTVLAWGLGAVTLR 134 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 +S + + + + G T + + + + ++ Sbjct: 135 LSGHYLPLCTIA---WGLSLYYLFGNMSFLGGQTGITGVPPLVLGGLSLAAPRAIGLLIW 191 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + L+ ++ L + A R ++ + S+ ++ F +++ ++G Sbjct: 192 ALLLLALWLLHNLLDSRAGRAIRALKGARVMAESMGVDTARYRIRLFVLAALLAALSGWL 251 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 +A + +SP F I + + ++GG L ++ + E S Sbjct: 252 YAHLQRFVSPTPFNLHIGIEYLFMAVVGGAGHLGGAVLGATLITLLKEKLQDWLPSLLGS 311 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + + LV+ + L + Sbjct: 312 SGNF-------ELIVFGLLMVLVLQRFADGLWPMLER 341 >gi|296135255|ref|YP_003642497.1| inner-membrane translocator [Thiomonas intermedia K12] gi|295795377|gb|ADG30167.1| inner-membrane translocator [Thiomonas intermedia K12] Length = 326 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 125/302 (41%), Gaps = 16/302 (5%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +G++++ + +FA +++ G GL+S + Y + + +G L I Sbjct: 31 LGMRMMCFALFACAFNLLAGYAGLISFGHAALFGGAGYLTGLALTTWGWPTPLGILTGVA 90 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G++MGL +++ G Y ++ TL +++I ++ T G+ G+ R G Sbjct: 91 TALLIGLVMGLLAVRRSGIYFSMITLALAQIVYFYALQA-HFTGGEDGLQGIPRGTLFGL 149 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S MYY++L + S + + + + +R+N+ Sbjct: 150 PLQSDR--------------VMYYLVLAVFVASWWFMRRVVNSPFGQVLQAVRENEPRAI 195 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL F +S+ F G+AGA A + +S + +VI + ++GG+ + Sbjct: 196 SLGYRVNRYKLGVFLISAGFAGLAGAMKAVVMGFETLTDVHWSTSGLVILMTLVGGLRTD 255 Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 I+ + E ++ + + + + N + ++ L +L+ ++ Sbjct: 256 LGPILGAVIITVLEEKMGTISRFLVHATGVDWFHQLNDSVSMVIGAIFVLCVLLFRRGIV 315 Query: 341 RL 342 Sbjct: 316 GE 317 >gi|229155547|ref|ZP_04283655.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus ATCC 4342] gi|228627865|gb|EEK84584.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus ATCC 4342] Length = 333 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 128/325 (39%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + + + + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFLIGLVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T ++ + +V+L+ L+ Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311 >gi|90424445|ref|YP_532815.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90106459|gb|ABD88496.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 323 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 110/286 (38%), Gaps = 14/286 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ ++ L +Q L + + A ++++G GLLS + Y Sbjct: 21 MIAFAVMTALLAVVPLTGVYPFFVMQGLCFALLACAFNLLIGYGGLLSFGHAMFLGTAGY 80 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +G+S L I + + A G+I GL +++ +G Y A+ TL +S++ + ++ Sbjct: 81 ASAHALKVWGVSPELGILIGTAAAAALGVITGLVAIRRQGIYFAMITLALSQLLYFVYLQ 140 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ + + F + +YYV+L L +I Sbjct: 141 --------------TPFTHGEDGIQGIPQGHLFGFIDLGKPTTLYYVILVGFLLGFLVIY 186 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + IR+N+ SL KL A+ +S+ G AG+ S Sbjct: 187 RAINSPFGEVLKAIRENEPRAISLGYKTDHYKLLAYILSATLAGFAGSLKVFVAQNASLT 246 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 ++ + ++ + ++GG+ ++ ++I + + G + Sbjct: 247 DVHWTMSGEIVLMTLVGGLGTIYGPVVGAFVIIAMQQYLAGFGQWV 292 >gi|227485098|ref|ZP_03915414.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus lactolyticus ATCC 51172] gi|227236931|gb|EEI86946.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus lactolyticus ATCC 51172] Length = 295 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 102/307 (33%), Gaps = 29/307 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS----YVILGSRYGLSIWL 94 + IY + A G ++V G L++ +G Y+ + + GL +WL Sbjct: 7 FFNGLQLGSIYALVALGYTMVYGIAKLINFAHGDIIMVGGYTVFLAIGLPLFKTGLPLWL 66 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 + + ++ G+++ + K + I+ LI + L + Sbjct: 67 AVVPAVIVCTLLGVLIERVAYKPLRNSSRISLLITTIGVSLFLQNLFVKIFTSNAKPLPA 126 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 V + ++ L+ + L++ +T A + Sbjct: 127 LFPQ-----------KSLSFGDVHLSLATVITIISTIILTYLLNLFVNKTKYGKAMLAVS 175 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++ A + + FA+ SA G+A + AS +I P M I + + Sbjct: 176 EDYGAAELVGINVNQVMTMTFAIGSALAGVASVLYVASYPQIQPFM-GSMLGIKAFTAAV 234 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 LGG+ S+ IL + L + ++ + L LV+L+ Sbjct: 235 LGGIGSIPGAVVGGLILGIIEVLTRAYLSSAYADA-------------IVFVILILVLLI 281 Query: 335 RSHSLLR 341 + + L Sbjct: 282 QPNGLFG 288 >gi|292558834|gb|ADE31835.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus suis GZ1] Length = 308 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 135/325 (41%), Gaps = 42/325 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI- 83 L + Y + QI I ++ A GL+++VG G SL AIGAY+ I Sbjct: 14 LFKVLYQPGILNFYYIQIVQQIGIQIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAVGIL 73 Query: 84 -LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + V +ISGA +++G+P+L+ +GDYLAIATL ++EI + ++I Sbjct: 74 GKMMPTYGGFAIALIVGMLISGAVALLVGIPTLRLKGDYLAIATLGVAEIIRILIINGGS 133 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +TNG AGI ++ ++ + + Sbjct: 134 VTNGAAGIMSIPLFTSWP-------------------------LVYIFVIITTLVTVNFL 168 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ + A ++R+++ A S+ F K+SAF + +AG A I P F Sbjct: 169 RSPMGRATISVREDEIAAESVGVNPTFVKVSAFVFGAMTAAIAGGLHAGYVGTIVPKDFA 228 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F ++ V+ I++LGG+ S++ A +L + + Sbjct: 229 FMTSVNVLIIIVLGGLGSITGTFVAAIVLGILNVFLKSY---------------SDISMI 273 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + +AL L+++ R LL + S Sbjct: 274 IYSLALILLMIFRPGGLLGTKEFSV 298 >gi|226946399|ref|YP_002801472.1| LivM family inner-membrane translocator [Azotobacter vinelandii DJ] gi|226721326|gb|ACO80497.1| Bacterial inner-membrane translocator, LivM family [Azotobacter vinelandii DJ] Length = 352 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 67/326 (20%), Positives = 131/326 (40%), Gaps = 16/326 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + + F+ + +++++ I L+ + GL+++ G G S+ A+GA Sbjct: 26 LAILLAVAFVLVPWLGDDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFMAVGA 85 Query: 79 YS-YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 ++ Y +L GL + L + I+ A G++ G+PS + +G YL + TL + + Sbjct: 86 FASYGLLLRVPGLPLPLALAGGGAIAAAVGLVFGIPSNRIKGFYLMVTTLAAQFFLEWVF 145 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 K+ N + ++ + Y ++LG L + Sbjct: 146 TKFPWFYNHASSGTISAPRLE-------------LFGLDLHAPAGRYLLVLGCVTLLTWV 192 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRI 256 + L R+ I W IRD A + + K AFAVSS ++G+AGA +A A Sbjct: 193 AVNLVRSQIGRNWMAIRDMDTAAAVIGIPVDGYKRLAFAVSSFYLGVAGALWAFAYLGTA 252 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 S F + + ++ I+I+GGM S++ A + + L + + Sbjct: 253 SAGSFDINRSFQILFIIIIGGMGSIAGNFVGAAFISLLPLLLNQIGQGLLGGNVDAG-QL 311 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 + + + ++ L+RL Sbjct: 312 QNLQKIIFGVLIIWFLVKEPEGLIRL 337 >gi|226356193|ref|YP_002785933.1| branched-chain amino acid ABC transporter permease [Deinococcus deserti VCD115] gi|226318183|gb|ACO46179.1| putative Branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] Length = 340 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 98/332 (29%), Gaps = 19/332 (5%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY------ 81 L I + +Y + A G ++V G L L++ + GA Sbjct: 3 LATLLPFLVNVIVGGLVIGFVYAIIALGYTMVYGVLQLINFAHSEVFVTGAIVGFEVFRL 62 Query: 82 -VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L + + + + +ISG +++ + + + + LI + IL Sbjct: 63 LANNPMNGYLKLIIALASAMLISGLLNVLIERLAYRPLRNAPKLVPLITAIGVSLILQDL 122 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFF---------RFPSSFVIYEIFMYYVLLGMC 191 + D Y L + + ++ ++ Sbjct: 123 LKLFEAFQTPSRFDLTYTLPQGFAAPFCGTESSCAPFGTFLKGIGIEVQLKDVIIIGVSL 182 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 A + + T + R + ++ + + FA+ A G++G F Sbjct: 183 LSLALLNHLVNHTRLGKGIRAVAQDRVTAGLMGIDSNRMISATFAIGGALGGVSGVLFGM 242 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ++ F II + +LGG+ S+ L + L G Sbjct: 243 KIGTVNAYS-GFDPGIIAFTAAVLGGIGSIPGAVLGGLTLGVIQNLIGGAFSVLGGLWQV 301 Query: 312 FDCSFNMRHTTLMV--IALFLVILMRSHSLLR 341 + + I L L+++ + LL Sbjct: 302 SNLEAIDASYQRIGAFIVLVLILIFKPTGLLG 333 >gi|197124775|ref|YP_002136726.1| inner-membrane translocator [Anaeromyxobacter sp. K] gi|220919494|ref|YP_002494798.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] gi|196174624|gb|ACG75597.1| inner-membrane translocator [Anaeromyxobacter sp. K] gi|219957348|gb|ACL67732.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] Length = 310 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 98/311 (31%), Gaps = 21/311 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLS 91 + + IY + A G ++V G L L++ Y +GA++ LGS + Sbjct: 8 LVNGLSLGTIYALIALGYTMVYGVLKLINFAHGDVYMVGAFAGYYLGSVTGTDRAPGMVG 67 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L+ + I GA G ++ + + + + LI + +L ++ Sbjct: 68 AALVTLGAMAICGALGYVIERFAYRPLRNRARLTALITAIGVSFLLEYGFQLSPIVRSPV 127 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 L V LL L + L + RT A R Sbjct: 128 EFPPGPSPRFFPALLELGEPLTFLGVTVPRIDLLGLLVALLLMIGLQLIVYRTRFGMAMR 187 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 + + + + F + SA AG A+SR +I +F + Sbjct: 188 AASFDPQVAGLMGIPVNRIISWTFVLGSALAAAAGIINASSRPKIE-PLFGLMSGLKAFV 246 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +LGG+ S+ +L E G + + F L LV Sbjct: 247 AAVLGGIGSVPGAMVGGLVLGLTEEYVAGYTSSQYRDAIAFT-------------VLILV 293 Query: 332 ILMRSHSLLRL 342 +L+R L Sbjct: 294 LLVRPEGLFGR 304 >gi|121611381|ref|YP_999188.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121556021|gb|ABM60170.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 295 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 111/307 (36%), Gaps = 19/307 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ + IY + A GL+I G GLL+ + IGAY+ I G + + Sbjct: 3 DFLTYLLTIGGIYAIMALGLNIQAGYGGLLNFGHIAFAGIGAYATGI-AHARGWPVPAGM 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++ A G +G + DY IATL ++EI + + + +T G GI L Sbjct: 62 ALGMALATALGWCIGRLGRRLAADYWGIATLAVAEILRTVALNEDWLTGGANGISAIPGL 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + F V + L A R +R+ Sbjct: 122 FENQPRPWNELLFMALVLGLVALLA--------------WLSARLGDGRFGRAIRLMREQ 167 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + + K +A +AG+ +A + P+ +E ++ +++++G Sbjct: 168 PQLAACMGYDLQSLKTRTVMSGAAVTALAGSLYALQMNFAGPEFLLAAETFVLWTMLMVG 227 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ + + +L + + + L ++ + L +L+R Sbjct: 228 GIGRTAGVLLGVVLL----QAVHAFVPFAKDMLGFDSDRAGALRLGMIGLILLACLLLRR 283 Query: 337 HSLLRLR 343 LL + Sbjct: 284 EGLLPEK 290 >gi|281412339|ref|YP_003346418.1| inner-membrane translocator [Thermotoga naphthophila RKU-10] gi|281373442|gb|ADA67004.1| inner-membrane translocator [Thermotoga naphthophila RKU-10] Length = 808 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 92/303 (30%), Gaps = 28/303 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L+ V + L + + + I ++ + + + ++G+++V+ + G + L+ Sbjct: 13 IFLILVAIVVFLGVTTREFLTVENIFTVILNVSFIAIMSFGMTMVIITSG-IDLSVGSIL 71 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + +L GLS +L + + + G+ GL K R ++S Sbjct: 72 GAASVVMGLLMDEKGLSPFLSVVIGLAVGVGFGLANGLLITKARLAPFISTLGMLSV--- 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 G+ + + + +Y ++G Sbjct: 129 ------------GRGLAYVMSGGWPISPFPESFTVHGQGMVGPVPVPVIYMAVIG----- 171 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++L+ T I N +A + + + ++ AG A Sbjct: 172 VIAHIFLKYTVTGRRIYAIGGNMEASKLVGIKTDRILILVYTINGFLAAFAGFLLTAWLG 231 Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308 ++ + VI+ ++GG ++ I+ + + + Sbjct: 232 -VAQPNAGQGYELDVIAATVIGGTSLSGGEGTILGAFLGAVIMGVLRNGMILLGGIVILA 290 Query: 309 LLK 311 Sbjct: 291 ASG 293 >gi|85706577|ref|ZP_01037670.1| putative branched-chain amino acid transport system permease [Roseovarius sp. 217] gi|85668989|gb|EAQ23857.1| putative branched-chain amino acid transport system permease [Roseovarius sp. 217] Length = 339 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 84/324 (25%), Positives = 139/324 (42%), Gaps = 18/324 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ LL L Y++S + LI+ A GL++V G G L L A+GA Sbjct: 10 LAVFFLLFGLGAPFIIPSLYLNSYMLPWLIWTAAALGLNLVTGWAGQLHLGYAAVMAVGA 69 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 YS I +R+G+ + + + S G + +L+ +G YLA+ TL M + +L Sbjct: 70 YS-AIHAARFGVPWEFALIIGGLASSVIGSLFAFAALRVKGLYLALTTLAMQFVMDWVLN 128 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 I+ G + L LG + S F YYV G C L + Sbjct: 129 HSPAISGGSHASLQSPTLALLGQEITSDTGF--------------YYVAFGWCVLVTIFM 174 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-IS 257 L L+RT + A +R+ A L + K+ AFA SS G++GA A+ + Sbjct: 175 LNLKRTGLGRALVAVREKDFAAAILGVNSFYYKILAFATSSFIAGVSGALLVATFFFLAA 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F + +I V+++VI+GG++S+ A+++ V L G SL Sbjct: 235 PEQFSVNVSIQVLAMVIVGGLSSIIGSYFGVALILLVPGLVNGFVVVTSQSLGMQINVET 294 Query: 318 MRHT--TLMVIALFLVILMRSHSL 339 + H + + +++L+ L Sbjct: 295 LAHIPNAVYGALIVIILLIEPLGL 318 >gi|167563795|ref|ZP_02356711.1| putative amino acid ABC transporter, permease protein [Burkholderia oklahomensis EO147] Length = 394 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 51 IAVGVGVPLAALVTPESSAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 110 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 111 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTGYLAYALALVVLVPA 170 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 171 AVAWVFGFFTFRSRVKGVYLSIITQAATFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 230 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ + S + + + IRD + L + + KL + Sbjct: 231 SPGTRTVLFLMTFATLVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 290 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I ++ V +GG +L + G Sbjct: 291 VVSAVLCGIAGALYVPQVGIINPSEMSPGNSIEMVIWVAVGGRGTLIGPIVGAFAVNGAK 350 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 351 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 383 >gi|330816621|ref|YP_004360326.1| ABC transporter, permease/ATP-binding protein [Burkholderia gladioli BSR3] gi|327369014|gb|AEA60370.1| ABC transporter, permease/ATP-binding protein [Burkholderia gladioli BSR3] Length = 768 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 102/302 (33%), Gaps = 12/302 (3%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + L + Q + + Q V+ A ++++GS GLLS + Sbjct: 10 AAGWLALVGLLVLPALIWPQGAVLAWLAQTAALVVLALSYNLLLGSTGLLSFCHAAFAGL 69 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +R+G ++ L + G++ G + + G A+ TL + E+ Sbjct: 70 GAFVAAHAFNRFGFALPWLPLAGGLGGAGFGLLFGAIATRRAGTAFAMITLGLGELIAAA 129 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + + Y ++ C LSA Sbjct: 130 AWSVPDWFGGAGGLAI------------DRAAGAPLGAWRFGADREAYALIAAWCLLSAL 177 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + T + R +RD + +L T +L +++ F G+AG + Sbjct: 178 AMRVVLATPFARLARAVRDKPRRVAALGTDPRRVRLLMMVIAAFFAGVAGTLTLIDVELA 237 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 S D + V+ ++GG A++ G++ + L + Sbjct: 238 SSDSVSMLRSATVLFATVIGGSGGFFGPVLGAAVMAAFGSFVAGLSRAWLFYLGLLFVAV 297 Query: 317 NM 318 + Sbjct: 298 VV 299 >gi|169830085|ref|YP_001700243.1| high-affinity branched-chain amino acid transport system permease [Lysinibacillus sphaericus C3-41] gi|168994573|gb|ACA42113.1| High-affinity branched-chain amino acid transport system permease protein [Lysinibacillus sphaericus C3-41] Length = 291 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 101/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ + IG++ +++ L + + + Sbjct: 7 LVNGISLGSIYALIALGYTMVYGIIKLINFAHGDVFMIGSFIGFYAIAKWELGFFPALLL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I G+++ + K + IA LI + ++ G Sbjct: 67 AMLICAIFGVLIERIAYKRLRNATRIAALITAIGVSLLIEYTTIFFRGAQPAAYP----- 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + F V +L L + + +T I A R + + Sbjct: 122 ------EVFKNKSFDILGVQISSTSILILSVAVVLMILLQFIVHKTKIGKAMRAVSHDAD 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + FA+ SA G AG F +I P M + +LGG+ Sbjct: 176 AARLMGINVDNTISATFAIGSALAGAAGVIFGVYYTKIDPLM-GVIPGVKAFIAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + +L V L + F + F + L L+++ R Sbjct: 235 GIIPGAMVGGMLLGVVESLVSALGFSLWRDAAAF-------------VILILILIFRPSG 281 Query: 339 LLR 341 + Sbjct: 282 IFG 284 >gi|152981369|ref|YP_001353498.1| ABC-type branched-chain amino acid transport system, permease component [Janthinobacterium sp. Marseille] gi|151281446|gb|ABR89856.1| ABC-type branched-chain amino acid transport system, permease component [Janthinobacterium sp. Marseille] Length = 365 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 106/346 (30%), Gaps = 32/346 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L + L F A Y ++ + + Y M A L +V G G+LSL + + Sbjct: 23 VVLALLPIMNLCFPADHALHISSYTIALVGKFMCYAMAALALDLVWGYTGILSLGHGVFF 82 Query: 75 AIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 A+G Y++ + R + + ++ + Sbjct: 83 ALGGYAHGMYLMRSIGRDGVYQSNLPDFMVFLNWKEYPWYWWMTEHFWFAMLLVVLVPGL 142 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSSF 176 I IK + + A L F R F + Sbjct: 143 LAFIFGYFAFRSRIKGVYFSIITQAMTFAFMLLFFRNDTGFGGNNGFTDFKRILGFTITD 202 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 + +Y V L + + + + + + +RD++ + ++ KL + Sbjct: 203 PSTKAVLYLVTLAFLLAALFVCRAIVTSKLGRVLQGVRDSESRLMFIGYNPLWFKLFVWT 262 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S+ G+AGA + I+P + +I ++ +GG SL + G+ Sbjct: 263 LSAVVCGIAGALYVPQVGIINPSEMSPANSIEMVIWAAVGGRGSLLGPIIGAFTVNGLKS 322 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F +F + + V L +L L Sbjct: 323 W--------------FTAAFPDLWLYALGLIFIFVTLFMPQGILGL 354 >gi|91780954|ref|YP_556161.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693614|gb|ABE36811.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia xenovorans LB400] Length = 656 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 112/285 (39%), Gaps = 14/285 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 LL G + ++IL + +FA +++ G +GL++ + Y Sbjct: 326 LYLLFLGGFGIVAPHFVYPTFLMEILCFALFACAYNLIFGYVGLVAFGHAAFFGAAIYVA 385 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +G+S L I + + S G+++G +++ RG Y A+ TL ++++ ++ Sbjct: 386 AQTAKFWGISPELAILLGTLASTMLGLVVGAIAIRRRGLYFAMITLALAQLVYFYGVQAS 445 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 ++ + R F + + +YY +L + +++ Sbjct: 446 WTKG--------------EDGLQDVPRGKLFGLFSLHQDAVLYYFVLAVFLTGFAVVHRA 491 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R+ R IRDN++ SL KL AF +S+ G+AG A + + Sbjct: 492 VRSPFGKVLRAIRDNEQRAVSLGYDTDRLKLIAFTISAGLSGLAGGTMAIVFQVATLNNL 551 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 F+ + V+ IV++GG ++ I++ + + Sbjct: 552 FFTTSAEVLLIVLIGGAGTILGPVVGAVIVVSMGHYLASTGSWVL 596 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 99/303 (32%), Gaps = 17/303 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + + G++++ G L + + + +GA+ L L L +P Sbjct: 13 LLIGLVNGSFYALMSLGVAVIFGMLRIANFVHGAQFMLGAFLGWFLLGLPTLFPGLGLPS 72 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + ++ + L I+ + +L+ ++ GI+ Sbjct: 73 VGYWPALVIVPLAIGAVGVLTEKLFISRAYKLDPSYGVLLTL-GLSLVIEGIFHVGFGSS 131 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + F+ + +VL + + RT + R +N Sbjct: 132 GKPYDVPLELANGWDLGFLYLPFYRAWVLAASMLICFGTWYLIERTRLGAYLRAATENPV 191 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 S + + + G+AG A + I+V +IV++GGM Sbjct: 192 VVESFGINVPRMLTLTYGLGVGLAGLAGLMAAPIYQV--SPQMGQNIIIVVFAIVVIGGM 249 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + L + L + +T++ + + +V+++R Sbjct: 250 GSIFGAIFSGFALGLIEALTKVF--------------YPQASSTVIFVIMAIVLVVRPQG 295 Query: 339 LLR 341 L Sbjct: 296 LFG 298 >gi|319794095|ref|YP_004155735.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315596558|gb|ADU37624.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 355 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 118/319 (36%), Gaps = 11/319 (3%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 S+ +IL++V+ +++G G++S + + IGAY I SR G Sbjct: 32 PFIFPGVKALSVAAKILVFVVLVASFDLLLGYTGIVSFAHTMFFGIGAYGIAISASRLGP 91 Query: 91 SI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 + + + S IS +GL SL+ R + A+ TL ++ FQ + + T G+ Sbjct: 92 NWGAVLVGLGASLAISLVLSFAIGLFSLRVRAIFFAMITLAVASAFQTLASQLSDFTGGE 151 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ + S F + YY+L + +L + + Sbjct: 152 DGLTFKLPELISPSFEFSEEPFLGVSLDG---RLLCYYLLFVAAVVLVLALLRIVNSPFG 208 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSEN 266 + IR+N+ ++ ++ + +A +S+ F +AGA A F Sbjct: 209 RVLQAIRENEFRAEAIGYRVVVYRTTAAVLSALFATLAGAMLAIWLRYNGPDTSLSFEIM 268 Query: 267 IIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 I V+ IV++GGM ++ A + + + +L + R Sbjct: 269 IDVLLIVVIGGMGTIYGAAIGAVLFVVAQSYLQDLLRLGSEAASGLPWLAALLSPDRWLL 328 Query: 323 LMVIALFLVILMRSHSLLR 341 + + L + ++ Sbjct: 329 WLGVLFVLSVYYFPTGIVG 347 >gi|319792076|ref|YP_004153716.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315594539|gb|ADU35605.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 309 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 97/305 (31%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + + + Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKDGMPNTPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + +L F + +A L S ++ + + + Sbjct: 68 LVLLIALIIACIVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAMIIWKPTN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ + +L F ++ + T + A R +N + Sbjct: 128 --KAYPNLLPTDPIHVGGAVISPTQVMILSVTAFSLVVLMWLVNYTKLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ I+ F + + + GG+ Sbjct: 186 VAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYG-IAQHAMGFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G +L + I L +++ +R Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGTLTGGVLG-----SNYSDIFAFIVLIVMLTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|115525783|ref|YP_782694.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115519730|gb|ABJ07714.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 337 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 129/303 (42%), Gaps = 16/303 (5%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 +K+ +L+ LF ++ ++ LIY + L+I+ G G SL Sbjct: 19 KNKLALGYLASTIILVLLFAVPLFAKNFVIFQMTMWLIYAIAILALNILTGGSGQFSLGQ 78 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 YA+GAY+ IL G++ L +PV+ +I A G + GLP+L+ G YLA+AT ++ Sbjct: 79 SAFYALGAYTSAILMEHGGVNYALTLPVAGIICFASGFLFGLPALRLSGIYLALATFALA 138 Query: 131 EIFQNILIK--WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 +L ++ T G G+ V G + + +YY L Sbjct: 139 TAMPQLLKLGVFEHWTGGVQGLVVTKPDAPFGLPMSQDMW--------------LYYFTL 184 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + + L ++ A IRDN+ A ++ + K AF +S+ G+AG Sbjct: 185 VISIVIYVFSVNLLKSRTGRAMMAIRDNEIAASAMGVDVSLYKTLAFGISAGTTGVAGGL 244 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A + ++PD + I + +++GG+ L +A ++ V + ++ + Sbjct: 245 GAIAVQFVAPDGYTIQLAIALFLGMVVGGVGWLPGSLAGSAFIVFVPNMAESISKGLSGA 304 Query: 309 LLK 311 + Sbjct: 305 VFG 307 >gi|283797881|ref|ZP_06347034.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Clostridium sp. M62/1] gi|291074571|gb|EFE11935.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Clostridium sp. M62/1] gi|295091909|emb|CBK78016.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Clostridium cf. saccharolyticum K10] Length = 294 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 100/307 (32%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ +G ++ + S G S L + Sbjct: 6 SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDIIMVGGFTTFTVVSTMGGSPLLGV 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++ G+ + + + +A LI + +L + G + Sbjct: 66 LAAVVVCTVLGVTVERVAYRPLRGASPLAVLITAIGVSYLLQNVALLIFGSNARQFTSVV 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + + ++L++ +T I A + ++ Sbjct: 126 NVPPLKLAG---------GALSISGVTIVTIAACIIIMIGLMLFINKTKIGQAMLAVSED 176 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +AG ++ ++P I + G Sbjct: 177 RGAATLMGINVNGTIAVTFAIGSALAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + + F L +V+L+R Sbjct: 236 GIGSIPGALIGGVLLGVIENLAKAYISSQLSDAIVFS-------------VLIIVLLVRP 282 Query: 337 HSLLRLR 343 +L + Sbjct: 283 TGILGKK 289 >gi|224367608|ref|YP_002601771.1| LivM2 [Desulfobacterium autotrophicum HRM2] gi|223690324|gb|ACN13607.1| LivM2 [Desulfobacterium autotrophicum HRM2] Length = 315 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 72/323 (22%), Positives = 137/323 (42%), Gaps = 31/323 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++ + L + ++G LI+ + I++G G+ ++ + + IGAY+ Sbjct: 12 VIFIIAMLLFPALADSKWLAIGSTFLIFSVVGLSEDIILGKGGMFNMGHALFFGIGAYTA 71 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKW 140 I +G+ I IP++ +I CG+++ P + RGDYL +AT+ + +F ++ Sbjct: 72 AIANKSFGIPILYSIPLAIIIPALCGIVLAGPIIHLRGDYLLVATIGFNIVFLQLVENNI 131 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 IT G GI+ D F + +YY+ +G+ L+ I+ Sbjct: 132 FGITGGPNGIFGLDTPS--------------FLGMDLASPTAIYYLGVGVLILTFFIMAN 177 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R+ A +R ++ A S+ KL AF + + G+AG A +SP+ Sbjct: 178 LDRSKAGRALHYLRLDELAANSIGINTRGYKLFAFGLGAGIAGLAGVLLAIQYSAVSPEA 237 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F ++++ SIV++GG SL I T ++ + E+ F Sbjct: 238 FNFMQSVLFFSIVLVGGS-SLPGILMGTFVMFVLPEIFR---------------DFATWR 281 Query: 321 TTLMVIALFLVILMRSHSLLRLR 343 + A+ +++R + R Sbjct: 282 YFIFGFAMIFAMILRPEGIFPAR 304 >gi|222102748|ref|YP_002539787.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] gi|221739349|gb|ACM40082.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] Length = 363 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 118/324 (36%), Gaps = 19/324 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + L + IL + A +++ G GL+S+ + GAY+ Sbjct: 33 LILVFAVLAFAPFFVSRGTVQNLFYILTMLTLAQSWNLLAGYAGLISVGQQLFVGCGAYA 92 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 + G++ + IP++ + + + L + + G Y AI T +++E+ + + +W Sbjct: 93 LFAMVILLGVNPLIAIPLAGVFATIVALPTALFTFRLHGSYFAIGTWVIAEVGRLVFAQW 152 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 K + G R S I V + Y++ L + + + Sbjct: 153 KTLGGGTG--ASLPREATREMFGVSTISALFGMKPAVALDSLAYWLALLLTGFTIVFVYR 210 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R+ +RDN+ A +L + KL+ + +++A GM GA + RISPD Sbjct: 211 LLRSKQGLGLAAVRDNETAATALGVDALRLKLTIYLLTAALTGMTGALIYLQKARISPDA 270 Query: 261 FKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 V+ IV++GG+ ++ IL + L +Y L Sbjct: 271 AFSLTDWTAYVLFIVVVGGIGTIEGPIVGVIILFFLQNLLSDFGSWYLLLLGALAILT-- 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 +L + L Sbjct: 329 -------------MLFAPRGIWGL 339 >gi|54025331|ref|YP_119573.1| putative ABC transporter ATP-binding protein [Nocardia farcinica IFM 10152] gi|54016839|dbj|BAD58209.1| putative ABC transporter ATP-binding protein [Nocardia farcinica IFM 10152] Length = 926 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 116/307 (37%), Gaps = 18/307 (5%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + + + +I+ + A +V G G +SL + + AY+ + G+ Sbjct: 343 TSGSYRAALVSSIIFAVLALSQVVVTGYAGQVSLAQLTLAGVAAYALSVSNQHLGIPFPF 402 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 V+A+ + G+++GLP+L+ RG L + TL ++ + + + G G + Sbjct: 403 APVVAALFATVVGVVVGLPALRVRGLPLTVVTLALAVFVEAFWFRNPSLNGGVQGAPIDA 462 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 F + + + L + + WLRR+++ +R Sbjct: 463 PRLFGID--------LGIGTGEAYPRLAFGLLCLVVLTAVGLAVAWLRRSSLGTDMLAVR 514 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 N+++ + + KL FA+ + G+AG + +P+ F I + ++V Sbjct: 515 ANERSAAAAGIDVSRTKLVTFAIGAFLAGLAGGLLGYQQTLATPEPFTVFLGISLFAVVY 574 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + G+TS++ A + G + L+ ++ + I L + ++ Sbjct: 575 VAGITSITGGILAGVMAPGGIVYL----------LVDRFLHVGDYYSVISGILLVVTVMA 624 Query: 335 RSHSLLR 341 + Sbjct: 625 NPDGIAS 631 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 79/297 (26%), Gaps = 7/297 (2%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ +Y L + S G+++ AY+Y +L + + Sbjct: 6 SFLVLGLGNGAVYAALGLALVMTFKSSGVVNFATGAVALYAAYTYALLRKGELMVPIPGL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA--- 153 P + + G G+ + L + + + V Sbjct: 66 PETIELGGPLGVAPAMAISLVAAAVLGVLCYALVFRPMRTASVIAKAVASIGLMIVIQAV 125 Query: 154 --DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 R +V + F ++ + LSA L R T A Sbjct: 126 IAQRAGTGLISVPPIFALDMFALGDRTVPADRVWLAASVVALSAVAALGFRFTRFGVATE 185 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +++K + + + + +SS G+ G A + + ++ Sbjct: 186 AAAESEKGTYLTGLSPDRIAFANWTLSSMVAGLGGILIAPLVAL--NPVAYSLFIVPALA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 ++G S+ A ++ + + Y L + + Sbjct: 244 ATLVGNFGSIWLTVTAGVVIGALQAEATNLQGLYDWWPRAGTAEAISLLLILGFLVV 300 >gi|91978521|ref|YP_571180.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91684977|gb|ABE41279.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 355 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 109/335 (32%), Gaps = 14/335 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++ + + ++ +I I+ +++G G +S + Y IG Sbjct: 16 LMLIAIIAVLAITPFLFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFYGIG 75 Query: 78 AYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +Y+ I ++ I + ++ + +GL SL+ + A+ TL ++ F Sbjct: 76 SYAVAIALYTMGPSWGAVAAGIVIGLPLAALLALGIGLFSLRVEAIFFAMITLAVASAFL 135 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + +T G+ G + V I YYV+ C Sbjct: 136 VLASQLSWLTGGEDGRSFQLP----ELLRPGTVFIKDLFGVRVNGRILTYYVIFVGCAAM 191 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +L + + + +R+N+ +L +F A +++ AG A Sbjct: 192 ILGLLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVIAALVAASAGVLNAMWLR 251 Query: 255 RI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 FS + ++ +V++GGM ++ I I + N+ + Sbjct: 252 YAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASNAATEAG 311 Query: 314 CSF------NMRHTTLMVIALFLVILMRSHSLLRL 342 R + + + ++ Sbjct: 312 LPLLPGLLHPDRWLLWLGLLFVASVYFFPTGIVGR 346 >gi|330873760|gb|EGH07909.1| high-affinity branched-chain amino acid ABC transporter permease BraD [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 304 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G +G+++ Y I AY I + P Sbjct: 9 IVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F S FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|311109601|ref|YP_003982454.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310764290|gb|ADP19739.1| inner-membrane translocator 72 [Achromobacter xylosoxidans A8] Length = 355 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 132/350 (37%), Gaps = 11/350 (3%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MS+ L + L LA++ + L ++ +IL++V+ +++ Sbjct: 1 MSVRLLSGDPPRSTLLALALIAIVALLATAPFLFPGPKSLAVAAKILVFVILVASYDLLL 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKF 117 G G++S + + IGAY I R ++ + + ++S A +++GL SL+ Sbjct: 61 GYTGIVSFAHTMFFGIGAYGVAIASIRMEPSWTAVLVGLSGGLVVSLAFALLIGLASLRV 120 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 R + A+ TL ++ FQ ++ + +T G+ G+ + F Sbjct: 121 RAIFYAMITLAVAAAFQTLVSQLSDLTGGEDGLNFKVPQMLRPAFRPFSEQIFGVTVDG- 179 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I YY++ +C + ++L + + + IR+N ++ + + + + Sbjct: 180 --RIITYYLIAAVCVVLFLLLLRIVNSPFGRVLQAIRENPFRAEAIGYRTVLYRSLSNLL 237 Query: 238 SSAFIGMAGAFFAASRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 ++AF +AGA +A F + ++ ++++GGM ++ ++ + Sbjct: 238 AAAFATLAGAMYALWLRYNGPDTSLSFEIMLNILLMLVIGGMGTMYGAVVGASLFVFAQS 297 Query: 297 LCCG----MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ R + I + + + Sbjct: 298 YLQDGLHVIHDAVSGVAPLALLFEPDRWLLWLGILFVVSVYYFPTGIAGR 347 >gi|83594744|ref|YP_428496.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] gi|83577658|gb|ABC24209.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] Length = 295 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 72/305 (23%), Positives = 122/305 (40%), Gaps = 17/305 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ ++ + LIY + GL++ G GL++ V +AIGAY+ +L I L + Sbjct: 3 SYLLAVTVIALIYSLMTLGLNLQYGFTGLINFGVVGFFAIGAYTSALLVVAGWP-ILLAL 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + S + L SL+ R +Y AI L +E + ++ +T G G+ L Sbjct: 62 PCAVAASALVSWPVALLSLRLRIEYFAIVMLGFAETIRLVVTSEGWLTGGVQGVTGIPSL 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V LG + L + R IRD+ Sbjct: 122 A-------------AALGLSMESTLLTALVALGAVIGVVWLSRRLVASPFGRIIRAIRDD 168 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A +L K++ F + SA G+AGA +A ISPD F + +ILG Sbjct: 169 EDAVQALGKAPGRFKVAVFVLGSASAGLAGALYAHYITYISPDQFMSLLTFYIWVAMILG 228 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ + TA+LIG++E + + ++ +AL +++ R Sbjct: 229 GVGRVGGAVLGTAVLIGLMEGSRFLRDILPGVA---EVEMASIRLGVIGLALMVLMRFRP 285 Query: 337 HSLLR 341 LL Sbjct: 286 EGLLG 290 >gi|148262198|ref|YP_001228904.1| inner-membrane translocator [Geobacter uraniireducens Rf4] gi|146395698|gb|ABQ24331.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Geobacter uraniireducens Rf4] Length = 325 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 114/308 (37%), Gaps = 34/308 (11%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + + +++V A ++ G G L+ + +GAY+ IL + L L Sbjct: 25 DTFFLRVITEAIMWVGLAIAFDVIAGYTGYLNFGHGAFFGMGAYAIGILMMQAHLPFALA 84 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P +++G +I G P+L+ +G Y AIAT +S Q + + IT G G+ Sbjct: 85 LPAGGVVAGIAALIAGFPTLRLKGPYFAIATWALSRAIQQLALTM-DITGGPDGMR---- 139 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 ++F+ + F Y +L+ + + L + IR+ Sbjct: 140 -----------------LTAFLNPQFFYYLMLIVVGGTFILLWFLLECAPFGLKLKAIRE 182 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-KFSENIIVISIVI 274 ++ +L K+ +F +S+ G+ G +A I P + + +V+ Sbjct: 183 DELGAKALGLNPTKLKMQSFILSAIPTGILGGIYAYWITFIDPASTLGDMVSDQAVVMVV 242 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 GGM +L ++ + + + + ++ + + ++ Sbjct: 243 FGGMGTLLGPVIGALLIFTFKTIFWAYL-----------SDYQLLYLIILGALIAISVVF 291 Query: 335 RSHSLLRL 342 + L Sbjct: 292 MPNGLWGT 299 >gi|221068451|ref|ZP_03544556.1| inner-membrane translocator [Comamonas testosteroni KF-1] gi|220713474|gb|EED68842.1| inner-membrane translocator [Comamonas testosteroni KF-1] Length = 356 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 130/345 (37%), Gaps = 11/345 (3%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L ++ L ++ ++LI+V+ +++G G++S + + Sbjct: 15 ILALMLLAIFLGLAVAPFAFPGVKALNVAAKVLIFVVLVASFDLLLGYTGIVSFAHTMFF 74 Query: 75 AIGAYSYVILG---SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IGAY I ++ L + + ++S + +GL SL+ R + A+ TL ++ Sbjct: 75 GIGAYGVAIASGKLGAGWGALALGLGAALLLSLLLSLAIGLFSLRVRAIFFAMITLAVAA 134 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 FQ + + T G+ G+ + + F I YY+L + Sbjct: 135 AFQTLASQLSDWTGGEDGLTFKMPEWLSPSFEPFENEIFGTLIDG---RIISYYLLFVLA 191 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L ++L + + + IR+N+ ++ ++ + ++ +S+ F +AGA A Sbjct: 192 LLLVLMLLRIVNSPFGRVLQAIRENEFRAEAIGYRVVIYRTTSSVLSALFACVAGAMLAV 251 Query: 252 SRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYF 306 PD F + + IV++GGM ++ + I + + +L + Sbjct: 252 WLRYNGPDTTLSFEIMMDCLLIVVIGGMGTIYGAVIGSVIFLVAQSYLQDLLRLGSEATA 311 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + R + + L + ++ + L+ Sbjct: 312 SLPWLSALLSPDRWLLWLGLLFVLSVYYFPTGVVGRLRAAASLKE 356 >gi|89901363|ref|YP_523834.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89346100|gb|ABD70303.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 317 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 126/327 (38%), Gaps = 28/327 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ + + A S Y+ S+ + ++ A +++ G++S + + Sbjct: 6 MIIAMLLAVYIAVPLAFGSDNYVMSLVVASMVIGGIALSWALLGNLGGMVSFGHAAFFGV 65 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ IL ++G+ + + I + + + LP L+ RG Y A+A L + IF+ + Sbjct: 66 GAYASAILSMKFGVPVLISILLGG-VGAVIASLAMLPVLRLRGPYFALAILAYAHIFRIL 124 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 +W +T G G+ RL + S Y V+L + A+ Sbjct: 125 ATQWTSVTGGSGGLSNIPRLPEIFGYDFSSKTGG-------------YLVILTIVLAFAA 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + ++R + A R + +++ A + K VS+ G+ GAF A + + Sbjct: 172 VYQYIRGSHYGLALRAMHESEDATRVVGVNSTLLKGLMLLVSAFMCGVVGAFNAHYINFL 231 Query: 257 SPDMFKFSENIIV-ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 PD + + I I GG +++ ++ + +L F Sbjct: 232 EPDYAFSGLWVTIPIVAAIFGGYRTITGPIVGAVVVYLIDQLI-------------FKNI 278 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 H ++ + L +I+ LL L Sbjct: 279 IPSGHQLVLGVLLVAMIVFSPDGLLPL 305 >gi|78064746|ref|YP_367515.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77965491|gb|ABB06871.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia sp. 383] Length = 324 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 124/302 (41%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y+ G + L + + Sbjct: 26 FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLATAGYATGYSIQTLGFTPELGVLAGTV 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 86 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + + + I+ + + I++N+ Sbjct: 132 GLQGVPRGHLFGLLDLSNDVALYYVVLAVVVAACAFIVRVVHSPFGQVLVAIKENEARAI 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGIAGLAGSLKVLVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + + S T + + +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASTTGVAWFHSLGESATIVTGLIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|220924475|ref|YP_002499777.1| urea ABC transporter permease protein UrtC [Methylobacterium nodulans ORS 2060] gi|219949082|gb|ACL59474.1| urea ABC transporter, permease protein UrtC [Methylobacterium nodulans ORS 2060] Length = 381 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 100/341 (29%), Gaps = 41/341 (12%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ A Y S+ + L Y + A L +V G G+LSL +A+G Y+ + Sbjct: 30 LMTAPGSAVHVPTYAVSLMGKYLTYAILALSLDLVWGYCGILSLGHGAFFALGGYAMGMY 89 Query: 85 GSRYG-----------------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 R W + ++ GL + F Sbjct: 90 LMRQIGPRGVYGHPVLPDFMVFLNYKELPWYWYGFDSFPFAAAMVLLVPGLLAFVFGWLA 149 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + + + + D + F + Sbjct: 150 FRSRVTGVYLSIITQAMTFALM----LAFFRNDMGLGGNNGLTDFKDILGFNVQAQGTRV 205 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 ++ + L+ + ++ +A IRD + L K+ AF VS+ Sbjct: 206 ALFGLSAVALALAYLLARFMTVSAYGKVLIAIRDAESRTRFLGYRTAHFKVLAFTVSAMM 265 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA + I+P F + +I + V +GG +L A ++ L G Sbjct: 266 AGVAGALYVPQVGIINPSEFTPANSIEAVIWVAVGGRGTLVGAALGGVLVNYAKTLLTG- 324 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ +V L ++ Sbjct: 325 -------------AMPDAWLFMLGALFVVVTLFLPRGIVGT 352 >gi|107103958|ref|ZP_01367876.1| hypothetical protein PaerPA_01005030 [Pseudomonas aeruginosa PACS2] Length = 529 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 31/295 (10%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLP 113 I G LG++++ +GAYS ++ + + L ++ ++ +G+ Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYSTYVVQLLFQRLAPEWLALYPLLALPVAFCVSAAIGMA 315 Query: 114 SLKFRGDYLAIAT---LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 + +L L+ + +LI+ + G + VA+ + Sbjct: 316 LERTVIRHLYGRPLETLLATWGISLVLIQLVRMLFGAQNVEVANPA---------WLSGG 366 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 ++ ++ F+ L L RT + R + N+ Sbjct: 367 IQVLPNLVLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRV 426 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 + AF + S G+ G A S+ I +V+LGG+ L+ A Sbjct: 427 DMLAFGLGSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFG 484 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ L++ + L I R L L+ Sbjct: 485 LGVANKILEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFALKGR 526 >gi|88798756|ref|ZP_01114339.1| branched-chain amino acid ABC transporter, permease protein [Reinekea sp. MED297] gi|88778519|gb|EAR09711.1| branched-chain amino acid ABC transporter, permease protein [Reinekea sp. MED297] Length = 355 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 124/332 (37%), Gaps = 11/332 (3%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + ++ L ++ I+++ +++G G++S + + IGA Sbjct: 18 LLAVIVVSLLLAPFIFDGSRALDTAARLCIFIVLVASYDLLLGYTGVVSFAHTLFFGIGA 77 Query: 79 YSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 YS I + + V+ +S + +GL SL+ + + A+ TL ++ + Sbjct: 78 YSVAIAFDHVAPGFGVLLVAVVVALGVSTVVAVTIGLVSLRVKAIFYAMITLAVASVATV 137 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ + T G+ G+ + + ++ YY++ + + Sbjct: 138 LVSQLYLYTGGEDGMTYRIPRVLTPAFKLLDDKVLGVRING---KLLNYYLIFTVSTVLF 194 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +++ + + + +R+N ++ T ++ + +A +S+ +AG A Sbjct: 195 LLMVRIVASPFGKVLKALRENDFRAEAIGYTTVYYRTAATVISACMATLAGVLMAIWLRY 254 Query: 256 ISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLL 310 PD + I ++ +V++GGM SL +L+ + E + + + + Sbjct: 255 TGPDSVLSLNIMIDILLMVVIGGMGSLYGAIIGATLLVLARNYLNEAMGVAHNAFIDVPI 314 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + R + + +++ ++ Sbjct: 315 LAELFNPERWLLWLGVLFVVMVYFFPLGIVGR 346 >gi|264677359|ref|YP_003277265.1| inner-membrane translocator [Comamonas testosteroni CNB-2] gi|262207871|gb|ACY31969.1| inner-membrane translocator [Comamonas testosteroni CNB-2] Length = 356 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 109/309 (35%), Gaps = 7/309 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ ++ ++LI+V+ +++G G++S + + Sbjct: 15 VLAVLLLAVFAGLALAPFLFPGVKALNVAAKVLIFVVLVASFDLLLGYTGIVSFAHTMFF 74 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG---LPSLKFRGDYLAIATLIMSE 131 IGAY I +R G L ++ L SL+ R + A+ TL ++ Sbjct: 75 GIGAYGVAIASTRLGAGWGALAAGLGGALVVSLLLSLAIGLFSLRVRAIFFAMITLAVAA 134 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 FQ + + T G+ G+ + + F +I YY+L + Sbjct: 135 AFQTLASQLSDWTGGEDGLTFKMPEWLSPSFEPFENDIFGVTIDG---KILSYYLLFAVA 191 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++L + + + IR+N+ ++ ++ + ++ +S+ F +AGA A Sbjct: 192 VALVLMLLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTTSSVLSALFACVAGAMLAV 251 Query: 252 SRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 F + + IV++GGM ++ + + + + Sbjct: 252 WLRYNGPDTSLSFEIMMDCLLIVVIGGMGTIYGAVIGAVVFLIAQSYLQDLLRMASEASA 311 Query: 311 KFDCSFNMR 319 + Sbjct: 312 GLPWLAALL 320 >gi|153815309|ref|ZP_01967977.1| hypothetical protein RUMTOR_01543 [Ruminococcus torques ATCC 27756] gi|317501667|ref|ZP_07959858.1| high-affinity branched-chain amino acid ABC transporter [Lachnospiraceae bacterium 8_1_57FAA] gi|331088450|ref|ZP_08337365.1| hypothetical protein HMPREF1025_00948 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847371|gb|EDK24289.1| hypothetical protein RUMTOR_01543 [Ruminococcus torques ATCC 27756] gi|316896918|gb|EFV18998.1| high-affinity branched-chain amino acid ABC transporter [Lachnospiraceae bacterium 8_1_57FAA] gi|330408217|gb|EGG87705.1| hypothetical protein HMPREF1025_00948 [Lachnospiraceae bacterium 3_1_46FAA] Length = 294 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 106/308 (34%), Gaps = 24/308 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IGAY +I + G+S L I Sbjct: 5 SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGAYMALITMMKAGMSPILAI 64 Query: 97 PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + ++ G+++ + R ++A LI + +L + G Sbjct: 65 VAAVIVCTVLGILIERIAYKPLRNASSSLAVLITAIGVSYLLQNTALLVFGANAQTFPSV 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + G ++ + + + ++L+++++ A R + + Sbjct: 125 IKWKGLSLAG---------GKLNISGETIVTIAACVVIMIVLMLFVQKSKPGQAMRAVSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + FA+ SA +AG ++ ++P I + Sbjct: 176 DKGAAQLMGINVNGTIALTFAIGSALAAVAGVLLCSAYPSLTPYT-GAMPGIKAFVAAVF 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ +L + ++ L +V+L++ Sbjct: 235 GGIGSIPGAFIGGILLGVIEIFGKAYISSQMADA-------------IVFAVLIIVLLVK 281 Query: 336 SHSLLRLR 343 LL + Sbjct: 282 PTGLLGKK 289 >gi|116253648|ref|YP_769486.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258296|emb|CAK09398.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 334 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 118/313 (37%), Gaps = 27/313 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 ++ +++ + L +V G G+ +L + GAY+ IL + YG++ LL+ ++ Sbjct: 44 LALLTRMITIALLVLSLDLVTGYCGVATLGHAALFGSGAYAAGILSAHYGINDPLLMMLA 103 Query: 100 AMISGACG-MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ GA ++ G L+ G + ++ + +F K T G G+ Sbjct: 104 GIVGGAVAGLLCGAIILRAHGLPQLVLSIALIHLFHEFANKASSWTGGSDGLSGIAPDPV 163 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G F +Y ++ + + + ++ L R+ R I+ + Sbjct: 164 FGL------------FEFDLYGHTAFFFGMALLLIVFVLLRVLVRSPFGMLCRAIKQDPL 211 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ + A + +A+S A G+ GA A S + D F+++ + +++LGG Sbjct: 212 RIRAMGASPKAALIRMYAISGAVAGVGGALNAISTQVVGLDSLSFTQSAEALVMLVLGGT 271 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL T I + + N +++ T++ L V+L Sbjct: 272 GSLFGALSGTVIFMLFEDYVSAANPFHW--------------LTMVGALLIAVVLFAPKG 317 Query: 339 LLRLRTPSNFLER 351 L R Sbjct: 318 LYGTAAAFVGRRR 330 >gi|167586400|ref|ZP_02378788.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 394 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 106/352 (30%), Gaps = 32/352 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 51 VAIGVGVPLAALVAPESSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 110 Query: 74 YAIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +A+G Y+ + R + + + G +L A Sbjct: 111 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAVALLLVVLVPA 170 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSS 175 + + +K ++ + A L F R FP + Sbjct: 171 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPVT 230 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ + L+ + + + +RD + L + + KL + Sbjct: 231 SPGTRTVLFLLTFAALVLAFVAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 290 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 291 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 350 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F + + LV L+ ++ L + Sbjct: 351 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGLVEAAI 388 >gi|325526279|gb|EGD03892.1| inner-membrane translocator [Burkholderia sp. TJI49] Length = 433 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 77/291 (26%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + +++ Sbjct: 159 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPAAFDWYPLVAVPVSFAAAALVGIV 218 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + S + + Sbjct: 219 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVANPSWMSGGVAVMQNL 276 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 277 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 336 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + I V+LGG+ ++ L V + Sbjct: 337 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 394 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++ + L I R + L+ S Sbjct: 395 IEPFWGAVLAK-------------IAVLAMIVLFIQKRPQGMFALKGRSAE 432 >gi|222102530|ref|YP_002539569.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] gi|221739131|gb|ACM39864.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] Length = 350 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 75/326 (23%), Positives = 130/326 (39%), Gaps = 18/326 (5%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYG 89 S+ +I+++ + LI + GL+++ G G LSL +GAY ++ Sbjct: 34 PFLTSEYWINAIIVPFLILSLAGLGLNLLTGYAGQLSLGAGAFMMVGAYATFAFQLRVPE 93 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L + +S +ISG G+ GLPS + +G YL ++TL F+ + +K+ NG + Sbjct: 94 LPLPLALIISGLISGVVGLAFGLPSTRIKGFYLIVSTLTAQFFFEWLFLKFPWFYNGNSS 153 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 +A + Y++ LG L + L R+ Sbjct: 154 ATIALP------------HGLSVFGLDLNNPHGRYFLTLGSVALLTWLSFNLVRSQTGRN 201 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSENII 268 W IRD A + AKL AFAVSS +G+AGA +A S F + + Sbjct: 202 WMAIRDMDTAAAVIGVPTFRAKLQAFAVSSFILGIAGALWAFTYLGSASVQSFGLTRSYQ 261 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 ++ I+I+GG+ ++ A + + + Y F+ + + I + Sbjct: 262 ILFIIIIGGLGTIRGAYLGAAFVSLLPLALDWLFQYLFSGHVDAGL-LQNIQKAIFGILI 320 Query: 329 FLVILMRSHS---LLRLRTPSNFLER 351 ++ LL LR R Sbjct: 321 IWFLIKEPEGLSRLLGLRRAHGARRR 346 >gi|152980464|ref|YP_001352469.1| branched-chain amino acid transport system permease protein [Janthinobacterium sp. Marseille] gi|151280541|gb|ABR88951.1| branched-chain amino acid transport system permease protein [Janthinobacterium sp. Marseille] Length = 290 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 103/306 (33%), Gaps = 26/306 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + + Y + GL+++ G + +++ YA+GAY + + +G++ + + V+ Sbjct: 9 LNALVLGSTYALLGIGLTLIFGIMRVVNFAHGELYALGAYVAYGVVAMFGMNFFGSLIVA 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 A++ G + L+ R +++ I+ + + G V Sbjct: 69 AIVGFLFGTAIEYFLLRRRDLKAIDEVMLIMIGVMIIMQNAELLMWGGVAKSVPSPFSQE 128 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + +VL+ L L + R+ + A R ++ A Sbjct: 129 PIVW-----------GAISVSPIRLFVLVTALALLVIFYLLIERSRLGLAMRATFQDKDA 177 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + FA+ S +AGA A + ++ +IVILGG+ Sbjct: 178 AKIVGVNVSHVYTLTFALGSCLASVAGALLAPV--FVVTPTMGDLASLKAFAIVILGGLG 235 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 +L A IL V E G L + + V++ R L Sbjct: 236 NLPGAALGGFILAIVEEFGAGYIS-------------TAYRDALGFLVILAVMIFRPQGL 282 Query: 340 LRLRTP 345 +R Sbjct: 283 FTIRER 288 >gi|270260923|ref|ZP_06189196.1| transporter [Serratia odorifera 4Rx13] gi|270044407|gb|EFA17498.1| transporter [Serratia odorifera 4Rx13] Length = 526 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ + + + +++ + Sbjct: 253 ITYGLLGVINMAHGEMLMLGAYSAYLVQGLFQQFAPQWLALYPLVALPVAFAITACIGMA 312 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ V L + + + Sbjct: 313 LER--TVIRHLYGRPLETLLATWGISLVLIQGVRVLFGAQNLEVANPAWLSGGIQLLPNL 370 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V++ + + A L L +T + R + N+ + AF + Sbjct: 371 VLPWNRIAVIVFVVLVLALTWLLLNKTRLGMNVRAVTQNRAMAACCGVPTGRVDMLAFGL 430 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L V ++ Sbjct: 431 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFGLGIVNKI 488 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L++ + L I R L + Sbjct: 489 LEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFAFKGR 523 >gi|323692014|ref|ZP_08106262.1| high-affinity branched-chain amino acid ABC transporter [Clostridium symbiosum WAL-14673] gi|323503937|gb|EGB19751.1| high-affinity branched-chain amino acid ABC transporter [Clostridium symbiosum WAL-14673] Length = 293 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 99/307 (32%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ +G ++ + S G S + + Sbjct: 5 SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDIIMVGGFTVFTIVSTAGGSPVVGV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 S ++ G+ + + + +A LI + +L + G + Sbjct: 65 LASIVVCTVLGVTIEKVAYRPLRGASPLAVLITAIGVSYLLQNVALLIFGSNARQFTSVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + ++ + ++ ++ +T I A + ++ Sbjct: 125 TLPALKLAG---------GKLSISGVTIVTIITCVIIMLALTTFINKTKIGQAMLAVSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ S+ +AG ++ ++P I + G Sbjct: 176 KGAATLMGINVNGTIAVTFAIGSSLAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + F L +V+L+R Sbjct: 235 GIGSIPGAMIGGILLGVIENLAKAYISSQLADAIVFS-------------VLIIVLLVRP 281 Query: 337 HSLLRLR 343 +L + Sbjct: 282 TGILGKK 288 >gi|206970890|ref|ZP_03231842.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|206734526|gb|EDZ51696.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus AH1134] Length = 298 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 121/304 (39%), Gaps = 31/304 (10%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98 M QI I+ +FA +++G G++S + + IGAY +L R + + I Sbjct: 1 MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +IS I+GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 AIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 YYV L ++ +++I + I N++ Sbjct: 121 RDRF-------------------TFYYVSLVCLCFIFILLRLFTKSSIGKVLKAISQNEQ 161 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L ++ K+ A V+ ++G F + ++ +F + + + ++GG+ Sbjct: 162 RVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L + I+ + + Y R T ++ + +V+L+ Sbjct: 222 GTLIGAIAGSGIIESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKG 272 Query: 339 LLRL 342 L+ Sbjct: 273 LVGT 276 >gi|257483302|ref|ZP_05637343.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 334 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 18 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMREAAG 77 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 78 DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 137 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 138 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVLLLIASLYIG 197 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 198 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 257 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 258 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 303 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 304 YWLFFLGALFIIVTLYLPKGVIGL 327 >gi|29831861|ref|NP_826495.1| D-ribose ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29608978|dbj|BAC73030.1| putative D-ribose ABC transporter substrate-binding protein/permease protein [Streptomyces avermitilis MA-4680] Length = 648 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 98/313 (31%), Gaps = 27/313 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +V + + G + + ++G+Q + + A+G++ V+ S G + L+ Sbjct: 27 ALTALIVLVVAMSALSGDFLTTDNLLNIGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 85 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ A + +GL + + + ++ ACG++ G + Sbjct: 86 ALSATVLAWTATSHGLPVVVAVALAVATGVACGLVNGFLISYGKLPPFIAT-------LA 138 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + G + ++ +L M + Sbjct: 139 MLSVGRGLSLVISQGSPIPFPDSVSHL--------------GDTLGGWLPVPVLVMIVMG 184 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L L RT I + I N++A + KL+ +A+S F AG A+ Sbjct: 185 LITALILGRTYIGRSMYAIGGNEEAARLSGLRVKKQKLAIYALSGLFAAAAGIVLASRLS 244 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 P + E + ++VI GG S IL + ++ F Sbjct: 245 SAQPQAAQGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSAFWQQ 304 Query: 310 LKFDCSFNMRHTT 322 + + Sbjct: 305 VVIGVVIALAVLL 317 >gi|327398298|ref|YP_004339167.1| ABC transporter integral membrane subunit [Hippea maritima DSM 10411] gi|327180927|gb|AEA33108.1| ABC-type transporter, integral membrane subunit [Hippea maritima DSM 10411] Length = 347 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 60/322 (18%), Positives = 114/322 (35%), Gaps = 7/322 (2%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 F++ Y + I++M A +++ G G SL AIGAY IL Sbjct: 18 FTFVWYANNNLTPYAVRIWENTAIFLMLAASYNLINGVTGQFSLEPNGFVAIGAYVAAIL 77 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + + + I L A + F ++ + Sbjct: 78 TLTPDQKD--AMFIIEPMVPWLKNIHMSFLPSLIIAGLVTAFVGFLLGFPVFRVRGDYLA 135 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G L + ++ I + G LS II+ + + Sbjct: 136 IVTLGF----GLTIRVISNNTITITNGALGLKGIASYTNIWWCFGWAILSMIIIMRIVYS 191 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A A + IRD++ A ++ + K++AF +++ F G+ G A ISP MF F Sbjct: 192 AFGRAMKAIRDDEDAAIAMGINTFWIKMAAFVIAAFFEGVGGGLLAHLITTISPTMFTFF 251 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 ++ I+++GG+ S++ AT ++I E+ + + L + Sbjct: 252 LTFQLLIIIVVGGLGSMTGTVMATILVIWGSEILRFVEQPMNIAGLHIP-GIPGMRMVIF 310 Query: 325 VIALFLVILMRSHSLLRLRTPS 346 I L ++++ ++ R S Sbjct: 311 SILLIVIMIFAREGIMGQREFS 332 >gi|319783757|ref|YP_004143233.1| urea ABC transporter permease protein UrtC [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169645|gb|ADV13183.1| urea ABC transporter, permease protein UrtC [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 410 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 109/357 (30%), Gaps = 35/357 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGA--TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 R+ IL +AV+ PLL A YI ++ + L Y + A L +V G G Sbjct: 14 RIAITIFILLAVAVIVPLLNLAVSPASAFYVPSYIVALTGKYLCYALLALALDLVWGYCG 73 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +LSL +A+G Y+ + R S + LP + D+ Sbjct: 74 ILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPILPDFMVFLNYKELPWFWYGFDHFWF 133 Query: 125 ATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRS 165 A L++ + + + + D + + Sbjct: 134 AGLMVLAVPGLLAFVFGWFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTD 193 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 F ++ M L+ + + + +RD + L Sbjct: 194 FKDILGFNVQADATRSALFAASAVMLALAVFVTWAIVGSKYGKLLMAVRDAESRTRFLGW 253 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 KL AF VS+ G+AGA + I+P F+ S +I V+ +GG ++ Sbjct: 254 RAENVKLFAFTVSAVMAGIAGALYVPQVGIINPGEFEPSNSIEVVVWAAVGGRGTIVGPI 313 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ G+ + V L+ ++ + Sbjct: 314 IGALLVNAGKSWFTGV--------------LPEFWLFALGGLFVAVTLLLPKGIIGM 356 >gi|146305734|ref|YP_001186199.1| inner-membrane translocator [Pseudomonas mendocina ymp] gi|145573935|gb|ABP83467.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Pseudomonas mendocina ymp] Length = 363 Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 98/320 (30%), Gaps = 27/320 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86 Y ++ +IL Y + A L +V G G+LSL + +A+G Y+ + Sbjct: 51 SAYALTLVGKILCYAIVALALDLVWGYAGMLSLGHGLFFALGGYAMGMYLMRQSAGDGLP 110 Query: 87 -RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---QNILIKWKP 142 W +P + + + L L LA ++ Sbjct: 111 AFMSFLAWSELPWYWYGTSSFLWALCLVVLAPGLLALAFGFFAFRSRIKGVYFSIMTQAL 170 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 G + + + R F + +++ + + S + L Sbjct: 171 TFAGMLLFFRNETGFGGNNGFTGFTRILGFDITAQGTRAALFFATVVLLVGSLYLGFRLA 230 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 231 RSKFGRVLTALRDAENRLMFCGYDPRGYKLFIWVLSAVLCGLAGALYVPQVGIINPSEMA 290 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 +++I V LGG +L I+ G+ F +F Sbjct: 291 PTQSIEAAVWVALGGRGTLIGPLLGAGIVNGMKSW--------------FTVAFPEYWLF 336 Query: 323 LMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 337 ALGALFIVVTLFLPKGVIGL 356 >gi|324325995|gb|ADY21255.1| branched chain amino acid ABC transporter permease [Bacillus thuringiensis serovar finitimus YBT-020] Length = 333 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 126/325 (38%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + + + I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDWQGVSVTNFLIGIIAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T ++ + +V+L+ L+ Sbjct: 287 ERWTIILGVLYIIVLLVFPKGLVGT 311 >gi|295102251|emb|CBK99796.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Faecalibacterium prausnitzii L2-6] Length = 292 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 95/305 (31%), Gaps = 25/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G S+V G + LL+ +GAY + ++ GL + Sbjct: 8 LINGLSLGSIYALIALGYSMVYGIILLLNFAHGDVIMVGAYMSWFVMNQLGLGPVTAVCA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ + I+ LI + L + G Sbjct: 68 TILTCTLLGVVIEKIAYTPLRSAPRISLLITAIGVSFFLEYTAELVMGS----------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + S F + L+ + +++T + A R + ++ Sbjct: 117 GAKVIPSYYDNKTFYLGKAPLGLTSIITLVVTVLSMLVLTFLVQKTKLGKAMRAVSEDMD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FAV SA G+ + S + +P M + +LGG+ Sbjct: 177 AARLMGINVNSTISFTFAVGSALAGIGSVLYCCSYPQATPTM-GSMLGLKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ + + + F L +V+L + Sbjct: 236 GSIPGAMVGGIVIGLCECFVSAIGLSAWKDAVTF-------------AILIIVLLFKPTG 282 Query: 339 LLRLR 343 L + Sbjct: 283 FLGRK 287 >gi|119896967|ref|YP_932180.1| ABC transporter membrane protein [Azoarcus sp. BH72] gi|119669380|emb|CAL93293.1| probable ABC transporter, membrane spanning protein [Azoarcus sp. BH72] Length = 397 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 99/356 (27%), Gaps = 32/356 (8%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 ++ + V L A Y S+ +IL Y++ A + ++ G G+LSL + Sbjct: 25 AVVACVGVPVAHLALPEGHALHLSAYTVSLLGKILCYMVVAVAMDLIWGYAGILSLGHGL 84 Query: 73 AYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 +A+G Y++ + W +P S + + L Sbjct: 85 FFALGGYAFGMYLMRQIGRDGSYQSDLPDFMVFLDWKELPWYWAGSDSFLWALFLAMALP 144 Query: 118 RGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 +I + + + R + Sbjct: 145 GLVAFVFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRILGYSI 204 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + ++ + + + +L + IRD + + + KL Sbjct: 205 TSPEMRATLFALSALLLIACLVLGRYLVSSRFGRVLAAIRDAESRVMFIGYNPLHYKLFM 264 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 + +S+ G+AGA + I+P + +I + V +GG +L I+ Sbjct: 265 WTLSAVLCGLAGALYVPQVGIINPSEMSPANSIEIAVWVAVGGRGTLVGAVLGAGIVNLA 324 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 F + + V L ++ L + Sbjct: 325 KSF--------------FTVTVPEYWPFFLGFLFIAVTLYLPDGVVGLWRKLRARK 366 >gi|238025740|ref|YP_002909971.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia glumae BGR1] gi|237874934|gb|ACR27267.1| Putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia glumae BGR1] Length = 326 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 128/323 (39%), Gaps = 15/323 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V +L L ++++ + +FA ++++G GLLS + A Y Sbjct: 6 VLYGVLLAGLAVLPFAGVYPLFVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLATAGYL 65 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 GLS L + + A G+++GL +++ +G Y A+ TL +++ + ++ Sbjct: 66 TGYAIQTLGLSPELGVLAGTAAATALGLVVGLFAIRRQGIYFAMITLAFAQMVYFVYLQA 125 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 ++ + R F + ++ +YYV+L L+A I+ Sbjct: 126 --------------PFTHGEDGLQGVPRGRLFGLLDLSSDLTLYYVILVAVVLAALSIVR 171 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + I++N+ SL KL AF +S+A G+AG+ + Sbjct: 172 IVHSPFGQVLVAIKENEPRAISLGYDTDRFKLLAFVLSAALAGLAGSLKVLVLGFETLGD 231 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMR 319 ++ + +VI + ++GGM +L A+++ + E + + + + + S Sbjct: 232 AYWTMSGLVILMTLVGGMGTLFGPLLGAALIVLLEERLGDIGTWLASATGVDWFRSLGES 291 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 + + + +L ++ Sbjct: 292 TSIVTGLIFIACVLTFRRGIVGE 314 >gi|295678150|ref|YP_003606674.1| inner-membrane translocator [Burkholderia sp. CCGE1002] gi|295437993|gb|ADG17163.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 324 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 122/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G S L + Sbjct: 27 FVMKVLCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYVTGYAMQTLGFSPELGVLSGTA 86 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++G +++ +G Y A+ TL ++++ + ++ Sbjct: 87 AATLLGLVVGFFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 132 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +Y+V+L + + +I+ + + I++N+ Sbjct: 133 GLQGVPRGNLFGLLSLSSDVALYFVVLAVIVAAFLLIVRIVHSPFGQVLVAIKENEPRAV 192 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG+ + + ++ + +VI + ++GGM +L Sbjct: 193 SLGYDTDRFKLLAFILSAGIAGLAGSLKVLVQGFETLSDAYWTMSGLVILMTLVGGMGTL 252 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + S T + + +L ++ Sbjct: 253 FGPLLGAALIVSLEDRLGDIGAALASMTGIDWFRSLGESVTIVTGLIFIACVLAFRRGIV 312 Query: 341 RL 342 Sbjct: 313 GE 314 >gi|27379152|ref|NP_770681.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27352302|dbj|BAC49306.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 322 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 106/287 (36%), Gaps = 15/287 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V+ ++ L + Y + Q L + + A ++++G GLLS + Sbjct: 20 MIVFAVMALLLASVPFTGVYPFFVM-QALCFALLACAFNLLIGYGGLLSFGHAMFLGTAG 78 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y + L L I V + ++ G S++ +G Y ++ TL +S++ I + Sbjct: 79 YCSAHALKVWALPPELGILVGVAGAFVLSIVTGYISIRRQGIYFSMITLALSQLLYFIYL 138 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + ++ + + F + +YYV+L +I Sbjct: 139 QA--------------PFTHGEDGIQGIPQGHMFGVLDLSKPTVLYYVVLVGFLAGFLLI 184 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + ++IR+N++ SL K AF +S G AG+ S Sbjct: 185 FRIINSPFGEVLKSIRENEQRAISLGYRTDQYKFLAFVLSGTLAGFAGSLKVFVAQNASL 244 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 +S + V+ + ++GG+ ++ ++I + + + Sbjct: 245 TDVHWSMSGEVVLMTLVGGLGTIFGPVVGAFVIIAMQQYLASFGQWV 291 >gi|288958251|ref|YP_003448592.1| ABC branched-chain amino acid transporter inner membrane subunit [Azospirillum sp. B510] gi|288910559|dbj|BAI72048.1| ABC branched-chain amino acid transporter inner membrane subunit [Azospirillum sp. B510] Length = 340 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 116/301 (38%), Gaps = 29/301 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +G+ L I + Sbjct: 59 FLMKVLCFALFACAFNLLIGFGGLLSFGHAAFFGSAAYVTAHTVKMWGVPPELGILLGTA 118 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 S G++ G +++ +G Y A+ TL +S++ + ++ Sbjct: 119 ASAFLGLLFGGIAIRRQGIYFAMITLALSQMVYFLALQL--------------PFTHGED 164 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++++ R F + + MYY +LG+ + +II ++ + IR+N+ Sbjct: 165 GIQAVPRGVLFGVFDLNNPLAMYYTVLGIFLIGFAIIWRTVQSPFGQVLKAIRENEPRAI 224 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S++ G+AG A + + + V+ + +LGGM +L Sbjct: 225 SLGYRTDRYKLLAFILSASLAGLAGGTKAIVFQLATLTDVTWQMSGEVVLMTLLGGMGTL 284 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 S A+++ + + ++ +L+ + Sbjct: 285 SGPVIGAALVVTLENYLAATSLPVP---------------VVIGCIFVACVLVFRRGIAG 329 Query: 342 L 342 Sbjct: 330 E 330 >gi|116694750|ref|YP_728961.1| ABC-type transporter, permease component [Ralstonia eutropha H16] gi|113529249|emb|CAJ95596.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 348 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 119/302 (39%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + +++L + +FA ++++G GL+S + AY+ L+ L + Sbjct: 30 LVMKLLCFALFACAFNLLLGYTGLVSFGHAAFFGGAAYACGYAMKFLQLTPELGLLAGTA 89 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 G++ G +++ +G Y A+ TL ++++F ++ T G+ G+ R Sbjct: 90 FGALLGLVFGALAIRRQGIYFAMITLALAQMFYFFCLQAPA-TGGEDGLQAVPR------ 142 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + + MYYV+L + + I+ + + R I++N+ Sbjct: 143 -------GDLFGVLPLASDHTMYYVVLLITAAAFLGIMRIVNSPFGQILRAIKENEPRAI 195 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +SSA G+AGA + + + VI + ++GGM +L Sbjct: 196 SLGYDADRFKLLAFVLSSALAGLAGALKTLVLGFATLTDVHWMMSGTVILMTLVGGMGTL 255 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S +++ + + + + + + + + + +L ++ Sbjct: 256 SGPLVGALVIVALENKLGDAGNALAAMTGIGWFETLGESVSMVTGLIFVVCVLTFRRGIM 315 Query: 341 RL 342 Sbjct: 316 GE 317 >gi|149202323|ref|ZP_01879296.1| ABC transporter, membrane spanning protein [Roseovarius sp. TM1035] gi|149144421|gb|EDM32452.1| ABC transporter, membrane spanning protein [Roseovarius sp. TM1035] Length = 368 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 100/346 (28%), Gaps = 28/346 (8%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 ++K L L + L + + + ++ + +Y M A +S+ GS G+L++ Sbjct: 7 HNKTLQWLFYIAVLAVLGAVPLISNDAFLLNQLAIYGVYGMLAVSISLCWGSGGILNMGQ 66 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 IA+ +GAY + + + P ++ P + Sbjct: 67 GIAFGLGAYCMAMTMQMQTQADGTIPPFMLNNGLDSLPLLWQPFQNTSTGIFLALFVPTV 126 Query: 131 EIFQNILIKWKPITNGKAGIYVA--------------DRLYFLGTTVRSLIRFFRFPSSF 176 I + +G + + + Sbjct: 127 FYLIFGGIMFTARVSGPFFAIMTLATLSAFATIFVDLQPYTNGVNGISPPSSLKLGQTEI 186 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 Y Y+ + + + ++ R ++D+ + L + + + Sbjct: 187 DPYSSGAYWFVFALLAACTVAAKLINQSRFGLIVRALKDDPERVRFLGYNVAIYETLVYT 246 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S +AG FA +SP F+ +I ++ V LGG SL + G Sbjct: 247 LSGLIAAIAGCCFAVLTQYVSPAQFEVGFSISIVIWVALGGRNSLIWAMFGAFTVQGAQS 306 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F ++ + LV+ L L Sbjct: 307 YV--------------GDQFLSTWILILGFSFILVVRFLPGGLAGL 338 >gi|320330448|gb|EFW86427.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330873928|gb|EGH08077.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 359 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVLLLIASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIIVTLHLPKGVIGL 352 >gi|303246981|ref|ZP_07333257.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] gi|302491688|gb|EFL51571.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] Length = 338 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 112/339 (33%), Gaps = 19/339 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L V +L Y S+ + + + ++ + L+I+ G++G S Sbjct: 6 VPALLAVLFAVLVWVSQTGTLNIYWQSVIMFMGVNIILSSSLNIINGNMGEFSCGHAGFM 65 Query: 75 AIGAYSYVILGSRYGLS---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 A+GAY +L + ++ +I+ + L L +A Sbjct: 66 AVGAYVSSVLSVALFAKSAAFGQPLLPPSLAVWFFPVILLIGGLAASVVGLLVAIPSFKT 125 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + I + + ++ M +V +G Sbjct: 126 RGDYLAIITIAAAYIVKSTIENINIIGGARGFMGMGSVMNAMTNTANLPWMMIWVFVGTV 185 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 F +I + I ++ A ++ KL AF VS G+AG FA Sbjct: 186 FS-VWLIRRFIYSTFGKGVDAISQDEIAAEIMSVDTNHIKLVAFMVSCGLAGVAGGLFAH 244 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ++P F ++ ++ +V LGGM SL+ + ++ ++E + + ++ Sbjct: 245 ILGYVNPGSFTILKSTEIMVMVYLGGMGSLTGSVLSAILVTLLMEALRPLQIIKWVAIP- 303 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + L L++ R ++ R ++ Sbjct: 304 --------------LLLVLLMQFRPEGIMGRRELADVFP 328 >gi|154496292|ref|ZP_02034988.1| hypothetical protein BACCAP_00579 [Bacteroides capillosus ATCC 29799] gi|150274375|gb|EDN01452.1| hypothetical protein BACCAP_00579 [Bacteroides capillosus ATCC 29799] Length = 305 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 99/309 (32%), Gaps = 22/309 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + + +Y + A G ++V G +L+ +GAY S + S Sbjct: 8 QNLINGVGLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVCFFTVSAFTDSPIAGG 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAI----ATLIMSEIFQNILIKWKPITNGKAGIYV 152 + +++ ++G+ + L A LI + L + G Sbjct: 68 LLGILLAVVVCTVLGVVIERLAYKPLRQAASLAVLITAIGVSYFLQNAALLLWGSDTKVF 127 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 L + + + + IF V + + + L+ R+ + A R Sbjct: 128 PSFLSQMLSKLPGGGSVTVLGCTVAYTTIFNMLVCVII---MVGLTLFTSRSKMGKAMRA 184 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 +N+ A + + FA+ SA +AG ++ ++P I + Sbjct: 185 CSENKDAARLMGINVDTTISITFAIGSALAAIAGVLLCSTYPTLTPTT-GSMPGIRAFTA 243 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 + GG+ S+ +L + + ++ L +V+ Sbjct: 244 AVFGGIGSIPGALLGGVLLGVIEIFAKSFS--------------TELSDAVVFAVLIVVL 289 Query: 333 LMRSHSLLR 341 L++ LL Sbjct: 290 LVKPTGLLG 298 >gi|238061206|ref|ZP_04605915.1| ABC branched-chain amino acid transporter permease component [Micromonospora sp. ATCC 39149] gi|237883017|gb|EEP71845.1| ABC branched-chain amino acid transporter permease component [Micromonospora sp. ATCC 39149] Length = 371 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 106/327 (32%), Gaps = 13/327 (3%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L + + L++ A G ++ G G+LS + +A G Y IL Sbjct: 49 LPGIFEGPLNSPGTLQLLAVCLVFGGLAAGYDLLFGRTGMLSFGHALYFAAGVYGTDILV 108 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 +R GL +W ++ ++G +L+ G A+ TL +++ ++ + Sbjct: 109 TRAGLPLWQAALLTITGGTILAGLLGAVALRTAGIAFAMVTLAFAQVGAILVAR------ 162 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 L + + V + +Y++ L L ++ + + Sbjct: 163 ------DFGGLTGGEEGLPLDVSGLPAGLVGVANTVNLYWLALAYLTLVVLVVHRVSGSP 216 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 +RD+++ L KL AF ++ G + SP + Sbjct: 217 TGRVLAGLRDDERRVGVLGLDPYRFKLVAFTLAGGLAAGGGVVYCLIVGGASPHITSSEL 276 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY-YFNSLLKFDCSFNMRHTTLM 324 + ++ +V+LGG + + + SL F + ++ Sbjct: 277 TLSLLVMVVLGGPGTRWGPVLGGVLYTYLDHRLTAFGASDAVESLPAFLSRPLSQPLFVL 336 Query: 325 VIALFLVILMRSHSLLRLRTPSNFLER 351 L + L LR+ L R Sbjct: 337 GTVFILAVYFFPGGLASLRSRLTPLAR 363 >gi|78065484|ref|YP_368253.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77966229|gb|ABB07609.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia sp. 383] Length = 395 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 96/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 52 VAIGIGVPLAALVAPESSAFHLSAYAMTLTGKLMCYAIAALALDLVWGYCGILSLGHGLF 111 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 112 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 171 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 231 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 232 SPGTRTVLLLMTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 292 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 352 SVFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 384 >gi|300310992|ref|YP_003775084.1| branched-chain aminoacid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300073777|gb|ADJ63176.1| ABC-type branched-chain aminoacid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 308 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 102/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G ++V G +G+++ Y I +Y ++ + L Sbjct: 12 LVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIASYVGLVTLTAIGVQSGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 LLGGALIVSVLVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + + F V ++ L ++ L++ R+ + A Sbjct: 129 ----RDMSVPVLISGALEFQMGSDFTVTIPYSRMVIVGVTLVLMVALTLFIARSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ L F + + + G A + +++P F I Sbjct: 185 RACAEDMGMANLLGIDTNKVISFTFVLGAMLAAVGGVLIALTIGKLNPY-IGFIAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPSEYKDVVSFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|261821760|ref|YP_003259866.1| urea ABC transporter permease [Pectobacterium wasabiae WPP163] gi|261605773|gb|ACX88259.1| urea ABC transporter, permease protein UrtC [Pectobacterium wasabiae WPP163] Length = 362 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 96/327 (29%), Gaps = 27/327 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 46 PLAISTYTLTLIGKILCYAIVAVALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 105 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138 W +P + ++ L L + ++ Sbjct: 106 EGMPAFMSFLSWTELPWFWAGTQYFVWVLCLIVLVPGVLAFVFGWFAFRSKIKGVYFSIM 165 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G + + + FP + I ++ + + S + Sbjct: 166 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRIGLFVATVLLLVASLLVG 225 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 226 FALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALYVPQVGIINP 285 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L I+ G F +F Sbjct: 286 SEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKSW--------------FTVAFPE 331 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 + + LV L ++ L Sbjct: 332 YWLFFLGLMFILVTLFLPRGVIGLLRR 358 >gi|53721612|ref|YP_110597.1| high-affinity branched-chain amino acid transport system permease protein [Burkholderia pseudomallei K96243] gi|76818755|ref|YP_337290.1| high-affinity branched-chain amino acid transport system permease [Burkholderia pseudomallei 1710b] gi|126442669|ref|YP_001061862.1| high-affinity branched-chain amino acid ABC transporter permease [Burkholderia pseudomallei 668] gi|126456016|ref|YP_001074809.1| high-affinity branched-chain amino acid ABC transporter permease [Burkholderia pseudomallei 1106a] gi|134284152|ref|ZP_01770845.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167722717|ref|ZP_02405953.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei DM98] gi|167741687|ref|ZP_02414461.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167818879|ref|ZP_02450559.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167827252|ref|ZP_02458723.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167848742|ref|ZP_02474250.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167897336|ref|ZP_02484738.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167905695|ref|ZP_02492900.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167914001|ref|ZP_02501092.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|167921913|ref|ZP_02509004.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|217425489|ref|ZP_03456982.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|226194948|ref|ZP_03790539.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237508918|ref|ZP_04521633.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242311665|ref|ZP_04810682.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254182335|ref|ZP_04888930.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254187396|ref|ZP_04893909.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254198789|ref|ZP_04905209.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254265059|ref|ZP_04955924.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254299838|ref|ZP_04967286.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|52212026|emb|CAH38033.1| high-affinity branched-chain amino acid transport system permease protein [Burkholderia pseudomallei K96243] gi|76583228|gb|ABA52702.1| high-affinity branched-chain amino acid transport system permease protein [Burkholderia pseudomallei 1710b] gi|126222160|gb|ABN85665.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126229784|gb|ABN93197.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134244470|gb|EBA44575.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|157809699|gb|EDO86869.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157935077|gb|EDO90747.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|169655528|gb|EDS88221.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184212871|gb|EDU09914.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|217391452|gb|EEC31481.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|225932753|gb|EEH28749.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|235001123|gb|EEP50547.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242134904|gb|EES21307.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254216061|gb|EET05446.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 308 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y +GAY ++ + + Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMLGAYVGLVTLTAIGTSAGYPLPV 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALVVSVVVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDMSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIVLMIALTLFIAHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ + L F + + + G + +++P F I Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|299533057|ref|ZP_07046443.1| inner-membrane translocator [Comamonas testosteroni S44] gi|298718942|gb|EFI59913.1| inner-membrane translocator [Comamonas testosteroni S44] Length = 356 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 109/309 (35%), Gaps = 7/309 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ ++ ++LI+V+ +++G G++S + + Sbjct: 15 VLAVLLLAIFAGLALAPFLFPGVKALNVAAKVLIFVVLVASFDLLLGYTGIVSFAHTMFF 74 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG---LPSLKFRGDYLAIATLIMSE 131 IGAY I +R G L ++ L SL+ R + A+ TL ++ Sbjct: 75 GIGAYGVAIASTRLGAGWGALAAGLGGALVVSLLLSLAIGLFSLRVRAIFFAMITLAVAA 134 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 FQ + + T G+ G+ + + F +I YY+L + Sbjct: 135 AFQTLASQLSDWTGGEDGLTFKMPEWLSPSFEPFENDIFGVTIDG---KILSYYLLFVVA 191 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++L + + + IR+N+ ++ ++ + ++ +S+ F +AGA A Sbjct: 192 VALVLMLLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTTSSVLSALFACVAGAMLAV 251 Query: 252 SRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 F + + IV++GGM ++ + + + + Sbjct: 252 WLRYNGPDTSLSFEIMMDCLLIVVIGGMGTIYGAVIGAVVFLIAQSYLQDLLRMASEASA 311 Query: 311 KFDCSFNMR 319 + Sbjct: 312 SLPWLAALL 320 >gi|171057448|ref|YP_001789797.1| inner-membrane translocator [Leptothrix cholodnii SP-6] gi|170774893|gb|ACB33032.1| inner-membrane translocator [Leptothrix cholodnii SP-6] Length = 311 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 101/305 (33%), Gaps = 6/305 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + + + + Sbjct: 8 IINGLVLGSMYALVALGYTMVYGIISLINFAHGEVLMVGAMVSWTVATAFQDAGIAAPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ I+ +L + + +A L + ++ + + + Sbjct: 68 VILLISMVAAIIVCSALNYTIEKVAYRPLRNAPRLAPLITAMGMSLLLQTLAMIIWKPNP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + + +L+ + A ++ + +T + A R +N + Sbjct: 128 KPYPQLIPAEIFFLWEDGPVITLTQVLILVTTAVVLAGLLYLVNKTKLGRAMRATAENPR 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + +A +AG +AA+ + M F + + + GG+ Sbjct: 188 VAGLMGVRPDHIISATFIIGAALAAIAGIMWAANYGTLQHSM-GFMPGLKAFTAAVFGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G L + + L LV+ +R Sbjct: 247 GNLTGAMVGGVLLGLIEAIGAGYLGDLTGGLFG-----SHYVEIFAFLVLILVLTLRPSG 301 Query: 339 LLRLR 343 L+ R Sbjct: 302 LMGER 306 >gi|146311642|ref|YP_001176716.1| inner-membrane translocator [Enterobacter sp. 638] gi|145318518|gb|ABP60665.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Enterobacter sp. 638] Length = 524 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 86/288 (29%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY ++ + + +++ ++ Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYCTWMVQQAMAQFAPQWLALYPIVALPVAFLVTAGVGMA 310 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 ++ + + +L W + + L + + + + Sbjct: 311 LER--SVIRHLYGRPLETLLATWGISLMIIQLVRMTFGAQNLEVANPAWLSGGVQVFANL 368 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I VL+ + + L L +T + R + N+ + AF + Sbjct: 369 ILPWNRIAVLVFVLLVLFFTWLILNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 428 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L ++ Sbjct: 429 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 486 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++++A+ L I R L L+ Sbjct: 487 LEPQMGAVLGK-------------IVILVAIILFIQKRPQGLFALKGR 521 >gi|56420470|ref|YP_147788.1| ABC transporter permease [Geobacillus kaustophilus HTA426] gi|56380312|dbj|BAD76220.1| ABC transporter (permease) [Geobacillus kaustophilus HTA426] Length = 352 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 94/291 (32%), Gaps = 13/291 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + LFL ++ S+ + L + + A G+S++ G G+LSL + + +GAY Sbjct: 9 WLFFAALFLAPFYLTEFRLSLLGKFLCFAIVAVGISLIWGYTGILSLGHGVYFGLGAYCM 68 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + L + + AIA + + L Sbjct: 69 AMYLKLEASQGHLPDFMEWSGVRELPWFWKPFAHPMVAIAAAIALPTLLAALLSYLTFKN 128 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRF-------------FRFPSSFVIYEIFMYYVLL 188 I + + T + F F S + +I +Y++ Sbjct: 129 RIKGVYFSLLSQAVVVVFVTLFIGKQEWTGGTNGLTNFSTVFGFSLSSPLTQIVLYWLTT 188 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 L L + IRD + L K+ +++S+AF G+AGA Sbjct: 189 ACLALIFVAARRLTSGRLGKVLIAIRDAENRVRFLGFNPTVYKVFVYSLSAAFAGVAGAL 248 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 F ISP+M +I ++ +GG SL ++ Sbjct: 249 FVLQVGLISPEMMGIIPSIEMVLWAAVGGRQSLMGAIIGAIVMNTAKSFLS 299 >gi|167578589|ref|ZP_02371463.1| high-affinity branched-chain amino acid transport system permease protein [Burkholderia thailandensis TXDOH] Length = 308 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 99/311 (31%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y +GAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMLGAYIGLVTLTAIGTSAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALVVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDMSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIVLMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + + L F + + + G + +++P F I Sbjct: 185 RACAQDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPTEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|303327495|ref|ZP_07357936.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Desulfovibrio sp. 3_1_syn3] gi|302862435|gb|EFL85368.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Desulfovibrio sp. 3_1_syn3] Length = 341 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 95/299 (31%), Gaps = 17/299 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY + A G ++V G + L++ Y +GA++ +++ G+ + + + Sbjct: 53 LTRGSIYALIALGYTLVYGIIELINFAHGEIYMLGAFTALLVAGVLGVYGFPAAGILIIA 112 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + + LI ++ + + Sbjct: 113 ALAAVIWCAAYGFTLEKVAYKPLRGA---PRLSPLISAIGMSIFLQNYVLLAQTSDFVPF 169 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 R L + + +LL ++ L++R T + A R N+K Sbjct: 170 PRLLPEMEFLEYVNYVMGPSDFLILLVSTLAMVALSLFIRFTRMGKAMRATAQNRKMALL 229 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L + F + S + G A+ +++ F + + +LGG+ S+ Sbjct: 230 LGINADWIISLTFIIGSGLAALGGVLIASHMGQVNF-GIGFLAGLKAFTAAVLGGIGSIP 288 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +L G + +L F L L+++ R +L Sbjct: 289 GAMVGGLVLGLAESFTTGYFSGNYEDILAFG-------------ILILILIFRPDGILG 334 >gi|50084918|ref|YP_046428.1| branched chain amino acid ABC transporter permease [Acinetobacter sp. ADP1] gi|49530894|emb|CAG68606.1| putative branched-chain amino acid permease protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 356 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 103/341 (30%), Gaps = 27/341 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 ++ ++ L L Y ++ +I+ + A L +V G G+LSL + + Sbjct: 21 FLVVMILPWLHLVPSDSPFYLSAYWVTLIGKIMCLALVALSLDLVWGYAGILSLGHGLYF 80 Query: 75 AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 A+G Y++ + W +P + + + L L Sbjct: 81 ALGGYAFGMYLMRQSAGDGLPDFMRFLSWNELPWFWVGTEHFIWAVLLVVLVPGVIAFIF 140 Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + +I + + + F + + Sbjct: 141 GFFAFRSKIKGVYFSIITQAMTFAAALLFFRNETGFGGNNGFTGFKTILGFDITSSMTRA 200 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +V + L + L IRD++ L ++ KLSA+ +S+ Sbjct: 201 VLCFVTALILMLCFIGLRILMNQPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVI 260 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA + I+P +I + V GG +L ++ G+ Sbjct: 261 AGIAGALYVPQAGIINPSEMNPVNSIEMAVWVAAGGRGTLIGPILGAGLINGLKTY---- 316 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + ++ +V L ++ L Sbjct: 317 ----------FTVAAPEFWLIILGALFIVVTLFLPKGVIGL 347 >gi|225375069|ref|ZP_03752290.1| hypothetical protein ROSEINA2194_00692 [Roseburia inulinivorans DSM 16841] gi|225213141|gb|EEG95495.1| hypothetical protein ROSEINA2194_00692 [Roseburia inulinivorans DSM 16841] Length = 293 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 101/305 (33%), Gaps = 23/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ +G Y + S G + Sbjct: 5 SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGCYIVFMTMSGQGWGAVPAV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +S ++ G+++ + K +A LI + L + G + + Sbjct: 65 VLSIIVCTVLGIVIEKIAYKPLRKATPLAVLITAIGVSYFLENAALLIFGADTRSFTNVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + L + A+++L++++T A + ++ Sbjct: 125 TLPALKLAG---------GALTISGTTIVTFLACVVIMAALMLFIKKTKAGQAMLAVSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ S +AG F ++ ++P I + + G Sbjct: 176 KDAAQLMGVNVNATISLTFAIGSGLAAVAGVLFCSAYPTLTPYT-GAMPGIKAFTAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + ++ L +V+L++ Sbjct: 235 GIGSIPGALIGGILLGVIEILGRAYISSQLSDA-------------IVFAVLIIVLLVKP 281 Query: 337 HSLLR 341 +L Sbjct: 282 SGILG 286 >gi|114706264|ref|ZP_01439166.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506] gi|114538125|gb|EAU41247.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506] Length = 343 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 126/344 (36%), Gaps = 29/344 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +++ + + L L L + ++ +I+++ + A L +V+G ++S Sbjct: 26 VSREGAAVAATILFAALALLPLLASAIDDPFLIVTATRIMVFALAALALDLVLGFGAMVS 85 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 IGAYS IL S I + V+ + +I G SL+ G Y + TL Sbjct: 86 FGHAAFLGIGAYSVAILSSHGVEDILVQTLVALGTASLFALITGAISLRTSGVYFIMITL 145 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ +I G G+ + +R S + ++ ++YV+ Sbjct: 146 AFGQMAYFFMISLSA-YGGDDGMTLWNRSTV-------------LGSDVLESDLVLFYVV 191 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L L+ + + + R RDN ++ + +L+A+ +S A +AG Sbjct: 192 LAALVLAFFALRAVVGSRFGRVLRGTRDNATRMRAIGFSPYSYQLTAYVMSGAIAALAGV 251 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F A + +SP + + +I +V++GGM +L L+ E + +Y Sbjct: 252 FLANQTEFVSPAYMNWQRSGELIVMVVIGGMGTLVGPIAGAIALLLAEEWLANLWEHY-- 309 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + + + L + R Sbjct: 310 -------------KLVLGVLIVCLALFTRGGIAGAARRLFRGGR 340 >gi|47568335|ref|ZP_00239037.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus G9241] gi|47555028|gb|EAL13377.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus G9241] Length = 333 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 128/334 (38%), Gaps = 31/334 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + + + + + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFLIGLVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATAYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R T ++ + +V+L+ L+ ++R Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKSLKNMKR 320 >gi|310829096|ref|YP_003961453.1| inner-membrane translocator [Eubacterium limosum KIST612] gi|308740830|gb|ADO38490.1| inner-membrane translocator [Eubacterium limosum KIST612] Length = 291 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 99/303 (32%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A G ++V G L L++ GAY I + W +I Sbjct: 7 FINGLNSGSIYALIAIGYTLVYGILKLINFAHGEIMMFGAYFAFIAATTLNWPFWAVIAF 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S +++ G+++ + + + ++ LI + L + G + Sbjct: 67 SMILTAVMGVVIEFIAYRPLRNAPRLSALITAIGVSMFLQNLALMIFGADPKVMPKIFPQ 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F + + + L++++T A R + +NQ Sbjct: 127 VV-----------FHVGGLEINSITLITIGLSVLFMILLELFIQKTKQGRAMRAVSENQN 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + SA + G ++ + I+P M + +LGG+ Sbjct: 176 AAILMGINVNRTISLTFLIGSALGALGGILYSTAYLNIAPTMGTM-PGLKAFVAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + + ++ + L +V+L + Sbjct: 235 GSVPGAMLGGFIIGMIETMTKAYISSTWADA-------------IVFLVLIIVLLFKPTG 281 Query: 339 LLR 341 +L Sbjct: 282 ILG 284 >gi|284161325|ref|YP_003399948.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631] gi|284011322|gb|ADB57275.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631] Length = 309 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 124/323 (38%), Gaps = 26/323 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L + K + M ++V++ +V G +G ++L V+ +GAY Sbjct: 5 LILALTAIPLIFPFVLPKSVVFMLGLAYLFVVYVVTWDLVAGYVGEVNLGHVVFIGLGAY 64 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L + + + I V A+++ G+ +G L+ +G YLA+ T I+ +F I+ Sbjct: 65 TSALLVLNQNVPVPISILVGAVVATLFGLGVGAVCLRLKGYYLALVTAILPLVFVQIVNI 124 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + I G G+ V ++ YY+ S ++ Sbjct: 125 YPQIFGGYEGLSV------------------GIKNALHRTTEGRYYIAYAFMLASVLVLY 166 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + + IRD+ + SL + K+ AF +S+ G+AGA A R + D Sbjct: 167 RVVNSKFGLRLKAIRDDPELAESLGINVFKHKVMAFCISAFVSGLAGAITAFYRLSVGVD 226 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 MF +++I + GG+ + + + + + + Sbjct: 227 MFGVPLMLLIIISAVFGGLGTFFGAIIGALTIYILKN--------WILMEVSYSTGIMGL 278 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 ++ L ++IL H + L Sbjct: 279 DNLIIYAMLIVLILKMPHGIFGL 301 >gi|120556243|ref|YP_960594.1| inner-membrane translocator [Marinobacter aquaeolei VT8] gi|120326092|gb|ABM20407.1| L-leucine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-valine ABC transporter membrane protein [Marinobacter aquaeolei VT8] Length = 307 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 97/297 (32%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + Y + A G ++V G +G+++ Y IGAY+ +I + L Sbjct: 11 LINGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGAYTALIAITGLATLGIAWLPL 70 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + + + ++S + G + + + + LI + L + + G Sbjct: 71 VLIVALICAVIVSSSMGWAVERVAYRPVRGRHRLIPLISAIGMSIFLQNYVHLAQGS--- 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + +F + + + + ++ L++ R+ I A Sbjct: 128 ----RNIGFPALIEGGFQFGSEDTFPMSISYIQITIFITTLICMTALSLFISRSRIGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + + L + F + ++ +AG + +F F + Sbjct: 184 RAVSQDLGMANLLGIDTNRIISATFVIGASLAAVAGLLLGMYYGSVD-PLFGFIAGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ IL + G + ++ F + + Sbjct: 243 TAAVLGGIGSIPGAMLGGLILGVAESMTSGYLSGEYKDVVSFSLLILILLFKPTGLL 299 >gi|330899634|gb|EGH31053.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str. M301072PT] Length = 359 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F S ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFMATVALLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 GEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ + Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352 >gi|313109852|ref|ZP_07795786.1| LOW QUALITY PROTEIN: putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|310882288|gb|EFQ40882.1| LOW QUALITY PROTEIN: putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 529 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 31/295 (10%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLP 113 I G LG++++ +GAYS ++ + + L ++ ++ +G+ Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYSTYVVQLLFQRLAPEWLALYPLLALPVAFCVSAAIGMA 315 Query: 114 SLKFRGDYLAIAT---LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 + +L L+ + +LI+ + G + VA+ + Sbjct: 316 LERTVIRHLYGRPLETLLATWGISLVLIQLVRMLFGAQNVEVANPA---------WLSGG 366 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 ++ ++ F+ L L RT + R + N+ Sbjct: 367 IQVLPNLVLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRV 426 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 + AF + S G+ G A S+ I +V+LGG+ L+ A Sbjct: 427 DMLAFGLGSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFG 484 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ L++ + L I R L L+ Sbjct: 485 LGVANKILEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFALKGR 526 >gi|296391693|ref|ZP_06881168.1| putative branched-chain amino acid ABC transporter, permease protein [Pseudomonas aeruginosa PAb1] Length = 529 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 31/295 (10%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLP 113 I G LG++++ +GAYS ++ + + L ++ ++ +G+ Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYSTYVVQLLFQRLAPEWLALYPLLALPVAFCVSAAIGMA 315 Query: 114 SLKFRGDYLAIAT---LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 + +L L+ + +LI+ + G + VA+ + Sbjct: 316 LERTVIRHLYGRPLETLLATWGISLVLIQLVRMLFGAQNVEVANPA---------WLSGG 366 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 ++ ++ F+ L L RT + R + N+ Sbjct: 367 IQVLPNLVLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRV 426 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 + AF + S G+ G A S+ I +V+LGG+ L+ A Sbjct: 427 DMLAFGLGSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFG 484 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ L++ + L I R L L+ Sbjct: 485 LGVANKILEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFALKGR 526 >gi|269125017|ref|YP_003298387.1| inner-membrane translocator [Thermomonospora curvata DSM 43183] gi|268309975|gb|ACY96349.1| inner-membrane translocator [Thermomonospora curvata DSM 43183] Length = 362 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 121/310 (39%), Gaps = 11/310 (3%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + G+ + + A G++++ G+ G LS+ A+GAY YV L + Sbjct: 23 PFYLESFWLTAGVFAMAAAIGAIGINLLTGATGQLSMGHAFFLAVGAYGYVYLAAEPEGG 82 Query: 92 I-------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + L ++ ++GA G + + + +G YL IATL + + Q++L P+T Sbjct: 83 LGGLGLPTPLAAVLAVALAGAAGGLFSPIAGRLKGAYLGIATLALIFLGQHVLFNAGPVT 142 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G V F ++++ L + + R Sbjct: 143 GGYNGRPVPPLEIFGFVFADDPQVVLLGVPFGAAEKLWLLAAALLALAAWFARGVLADR- 201 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A TIRD++ A + + + F +SS + G+AG A + + P F Sbjct: 202 -PGRAMNTIRDHETAAGVMGVPVARYRAGVFVLSSMYGGLAGVLLALTFQQTVPSYFDML 260 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNMRHTT 322 ++ ++++++GG+ S+ A + + E+ + + S Sbjct: 261 RSLDYLAMIVIGGLGSVGGAVIGAAFVSLLPEVLGRYSEALPLVAAPGSGGFSPAEASRV 320 Query: 323 LMVIALFLVI 332 L IA+ V+ Sbjct: 321 LYGIAVVAVV 330 >gi|87123409|ref|ZP_01079260.1| putative membrane protein of ABC transport system [Synechococcus sp. RS9917] gi|86169129|gb|EAQ70385.1| putative membrane protein of ABC transport system [Synechococcus sp. RS9917] Length = 373 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 96/351 (27%), Gaps = 32/351 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + L ++ L + + ++ + L + A G+ ++ G GLLS Sbjct: 2 MTRRRFPWSWLLWAVVIVAVLLAPSVL-PVFRLNLLGRYLALAIVALGIDLIWGFTGLLS 60 Query: 68 LNCVIAYAIGAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 L I +A+G Y+ + P Sbjct: 61 LGQGIFFALGGYAAAMFLQLGSASDAAHGLPEFFSLYGVDQLPLFWEPFRSPLFTLIAIA 120 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV-----------RSLIRFF 170 L A + + + K + + + F Sbjct: 121 LIPALVAAGLGYLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTMLF 180 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 + +++ + +S + WL R + IRD++ Sbjct: 181 GQMVGSEGMQRGFFWLTAALVIVSWLFVRWLVRGRFGDVLIAIRDDESRLRFTGYNPTQF 240 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 K FA++ A G++GA + +SP +I ++ V +GG +L + Sbjct: 241 KTIVFALAGALAGVSGALYTVQSGIVSPQYMTVPFSIEMVIWVAVGGRGTLLGAVLGAVL 300 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + + LV+ + LL Sbjct: 301 INYAKSLVSE--------------AIPESWMFIQGGLFILVVTVLPQGLLG 337 >gi|296137602|ref|YP_003644844.1| inner-membrane translocator [Thiomonas intermedia K12] gi|295797724|gb|ADG32514.1| inner-membrane translocator [Thiomonas intermedia K12] Length = 311 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 30/325 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + + + +Y + A IV+G G+ + + + +GAY Sbjct: 13 IGAAFWVIGLAIPLVLDQTWVFIAALFAVYAIVALSQDIVLGRAGMFDMGHAVYFGVGAY 72 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-I 138 IL +R+ I+ PV+ +++G G ++ P +K RGDYL +AT+ + IF L Sbjct: 73 VTSILNTRFNWPIFATWPVAILVAGLVGAVLAAPIVKLRGDYLLVATIGFNAIFVLALRN 132 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G GI+ G ++ S +++ + +I Sbjct: 133 NLGHLTGGSDGIFGIGVPSLFGFSLSSQN--------------AQFWLDWLAFAVVLLLI 178 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ + + ++ +Q A ++ ++ AFA+ +A G AG FA +SP Sbjct: 179 RNLDRSHLGRVFYYLKHDQLAATTMGVDARAYRVLAFALGAALAGFAGTLFATLMAAVSP 238 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F F+E++ + +IV++GG S+ + T ++ V ++ Y Sbjct: 239 GAFVFTESVTLFAIVLVGGQGSIPGVLLGTVLMFVVPQIFRSFAEY-------------- 284 Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343 + IA+ +V+++R + R Sbjct: 285 -RYFIFGIAMVVVMVLRPQGIWPRR 308 >gi|238894647|ref|YP_002919381.1| high-affinity branched-chain amino acid ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|238546963|dbj|BAH63314.1| high-affinity branched-chain amino acid ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 357 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 98/336 (29%), Gaps = 27/336 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L ++ ++ +IL Y + A L +V G G+LSL I +A+G Y+ Sbjct: 33 FLALLPASHPLAVPSWLLTLSGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92 Query: 83 IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + S S ++ L + A Sbjct: 93 MYLMRQAAGDGLPAFMSFLSWSELPWFWWGTQHFAWAMALVVLVPGLLALVFGWFAFRSK 152 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + ++ G + + + FP + ++ + Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTRASLFMATVL 212 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ + L ++ +RD + KL + +S+ G+AGA + Sbjct: 213 LLLLTLWLGAALAQSKFGRILTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALY 272 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I+P + +I V LGG +L ++ G + Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGLVNGAKSI------------ 320 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + + +V L ++ L Sbjct: 321 --FTVAMPEYWQLFLGLIFIIVTLFLPRGVMGLLRR 354 >gi|330006532|ref|ZP_08305631.1| urea ABC transporter, permease protein UrtC [Klebsiella sp. MS 92-3] gi|328535809|gb|EGF62244.1| urea ABC transporter, permease protein UrtC [Klebsiella sp. MS 92-3] Length = 357 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 98/336 (29%), Gaps = 27/336 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L ++ ++ +IL Y + A L +V G G+LSL I +A+G Y+ Sbjct: 33 FLALLPASHPLAVPSWLLTLSGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92 Query: 83 IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + S S ++ L + A Sbjct: 93 MYLMRQAAGDGLPAFMSFLSWSELPWFWWGTQHFAWAMALVVLVPGLLALVFGWFAFRSK 152 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + ++ G + + + FP + ++ + Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTRASLFMATVL 212 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ + L ++ +RD + KL + +S+ G+AGA + Sbjct: 213 LLLLTLWLGAALAQSKFGRILTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALY 272 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I+P + +I V LGG +L ++ G + Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGLVNGAKSI------------ 320 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + + +V L ++ L Sbjct: 321 --FTVAMPEYWQLFLGLIFIIVTLFLPRGVMGLLRR 354 >gi|163758197|ref|ZP_02165285.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica DFL-43] gi|162284486|gb|EDQ34769.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica DFL-43] Length = 367 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 95/339 (28%), Gaps = 29/339 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A L + + ++ + +Y + A LS+ G G+L+L IA+ +GA Sbjct: 16 AYAVFFALIALIPLSMDDAFLLNQLSTYGVYGILALSLSLCWGFGGILNLGQGIAFGLGA 75 Query: 79 YSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 Y + + +P G+ + L L Sbjct: 76 YGMAMTMQMQTQDAADPIPPFMLNNGLDALPAIWEPFANTGLGIFLALAVPTLYCLIFGA 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV---IYEIFM 183 L+ + A V L +L V + + Y Sbjct: 136 LMFQARVSGPFFAIMTLAMLSAIYTVFIDLQYLTNGVNGISPPQSLMLGSLEVDPYSTTS 195 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 ++ + + + + + R ++ + L + + + +S Sbjct: 196 FWGVYIVLLVCTIAAKLITLSKFGLIVRAQNNDAERVRFLGYNVAVYETLIYTISGLMAA 255 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 +AG FA +SP F S +I ++ +GG SL I+ G Sbjct: 256 LAGCCFAYLTQYVSPSQFDVSFSISIVIWAAIGGRGSLLWAILGAFIVQGAQSYL----- 310 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F ++ LV+ L L Sbjct: 311 ---------GDEFLNTWILILGFFFILVVRFLPTGLAGL 340 >gi|149191435|ref|ZP_01869685.1| ABC-type branched-chain amino acid transport system, permease component [Vibrio shilonii AK1] gi|148834704|gb|EDL51691.1| ABC-type branched-chain amino acid transport system, permease component [Vibrio shilonii AK1] Length = 382 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 97/335 (28%), Gaps = 33/335 (9%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L + + S+ + L Y M A + +V G LG+LSL +A+G Y+ + Sbjct: 37 LLPVGHPLHVETFTISLMGKYLSYAMLALAVDLVWGYLGILSLGHGAFFALGGYAMGMYL 96 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 R + LP D A L++ + + + + Sbjct: 97 MRQIGDRGVYGNPILPDFMVFLDWQALPWFWQGFDQFWFACLMVVLVPGALAYVFGYLAF 156 Query: 146 GKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + + + F +I ++ + Sbjct: 157 RSRVSGVYLSIMTQALTYALMLAFFRNEMGFGGNNGLTDFKDILGFSLQQDATKIALFMI 216 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +S + + + + IRD + + + KL F +S+ G+AG Sbjct: 217 TGIALVVSYVVCRTIISSRLGRVSMAIRDTESRTRFMGYDVDGIKLWIFVLSAVIAGVAG 276 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A + I+P F +I V+ V LGG +L ++ Sbjct: 277 ALYVPQVGIINPGEFAPLNSIEVVVWVALGGRATLFGAIVGALVINYAKSW--------- 327 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F F + L + L+ Sbjct: 328 -----FTVEFPEVWLFALGGLFVLSTMYFPKGLIG 357 >gi|83716942|ref|YP_440032.1| high-affinity branched-chain amino acid transport system permease [Burkholderia thailandensis E264] gi|167616731|ref|ZP_02385362.1| high-affinity branched-chain amino acid transport system permease protein [Burkholderia thailandensis Bt4] gi|83650767|gb|ABC34831.1| high-affinity branched-chain amino acid transport system permease protein [Burkholderia thailandensis E264] Length = 308 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y +GAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMLGAYIGLVTLTAIGTSAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALVVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDMSVPVLISGAFDIRLGGDFDVTVPYARLLIVCVTIVLMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ + L F + + + G + +++P F I Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPTEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|332653977|ref|ZP_08419721.1| high affinity branched-chain amino acid ABC transporter, permease protein [Ruminococcaceae bacterium D16] gi|332517063|gb|EGJ46668.1| high affinity branched-chain amino acid ABC transporter, permease protein [Ruminococcaceae bacterium D16] Length = 355 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 78/334 (23%), Positives = 130/334 (38%), Gaps = 23/334 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + L +V L++ + G ++ I I YV A L++VVG G L Sbjct: 12 KTTRSSLFTYTLVIVAFLIIQVLRGTVGIGSVLEGQLIPICAYVTMALALNLVVGVSGEL 71 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIW-------LLIPVSAMISGACGMIMGLPSLKFRG 119 SL +IGA+ S I + + V A ++G G ++G+P L+ G Sbjct: 72 SLGHAGFMSIGAFMGCSAASALAGVIPFAPLRLAVAMLVGAALAGFFGFLIGIPVLRLNG 131 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI TL EI +++L + K G + + Sbjct: 132 DYLAIVTLAFGEIIKSLLTN-VYLGVDKDGFQFSFLSDKNTLGEGGIQLIKGPMGVMNTA 190 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 I + + ++ II L + A RDN+ A S+ ++ K+ AF S+ Sbjct: 191 RISSFIAGFILVMITLIIIFNLVNSRTGRAIMAARDNRIAAESVGISVTKYKMIAFVTSA 250 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A G AG + S+ + F F+ +I+++ V+LGG+ ++ A A L + E Sbjct: 251 ALAGAAGTLYGCSQVTFTATKFDFNTSILILVFVVLGGLGNMWGSVIAAAALTILPEALR 310 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 Y + I L LV+L Sbjct: 311 QFADY---------------RMLVYAIVLILVML 329 >gi|269123241|ref|YP_003305818.1| inner-membrane translocator [Streptobacillus moniliformis DSM 12112] gi|268314567|gb|ACZ00941.1| inner-membrane translocator [Streptobacillus moniliformis DSM 12112] Length = 298 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 101/302 (33%), Gaps = 20/302 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + IY + A G ++V G + L++ IGAY + G ++ + +S Sbjct: 10 INGLQTGSIYALIALGYTMVYGIVKLINFAHGDILMIGAYISFM-AVNRGFNLTTALIIS 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + G++M + + D + LI + +L I G + + Sbjct: 69 IIFCSILGIVMERLAYRPLRDASRMNVLITAIGLSFLLESLALIYFGASPKIIKSEFIPK 128 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + I F S + ++V++ F + ++++ T + A R + + A Sbjct: 129 YLSSSEYISIFGIRVSNLS-----FFVIIVTLFCMLLLHVFIKYTNLGKATRAVSQDISA 183 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + F FA+ SA + G +A + RI P M + + GG+ Sbjct: 184 AKLMGINTDFTISLTFAIGSALGSLGGLMYALTYPRIDPYM-GLLPGLKAFIAAVFGGIG 242 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ ++ + G + + + F + + + L Sbjct: 243 NIPGAMVGGYVMGLLETYVKGYISSTWANPIVFILLIIILL-------------FKPNGL 289 Query: 340 LR 341 Sbjct: 290 FG 291 >gi|253688544|ref|YP_003017734.1| urea ABC transporter, permease protein UrtC [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755122|gb|ACT13198.1| urea ABC transporter, permease protein UrtC [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 358 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 95/327 (29%), Gaps = 27/327 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 42 PLAISTYTLTLIGKILCYAIVAVALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 101 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138 W +P + + L L + ++ Sbjct: 102 EGMPAFMSFLSWTELPWFWAGTQYFAWALCLIVLVPGVLAFVFGWFAFRSKIKGVYFSIM 161 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G + + + FP + I ++ + + S + Sbjct: 162 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRIGLFVATVLLLIASLLVG 221 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 222 FALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALYVPQVGIINP 281 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L I+ G F +F Sbjct: 282 SEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKSW--------------FTVAFPE 327 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 + + LV L ++ L Sbjct: 328 YWLFFLGLMFILVTLFLPRGVIGLLRR 354 >gi|223984824|ref|ZP_03634933.1| hypothetical protein HOLDEFILI_02231 [Holdemania filiformis DSM 12042] gi|223963198|gb|EEF67601.1| hypothetical protein HOLDEFILI_02231 [Holdemania filiformis DSM 12042] Length = 292 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 91/289 (31%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GAY I ++ G+ + + Sbjct: 8 LINGLSLGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAYIGFICTAQLGMGFFPALAA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + I G+I+ + K + I LI + L G Sbjct: 68 AMGICALIGVIIERIAYKPLRNATRITALITAIGVSYFLEASTQKVMGT----------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T ++ + V+ + L + +R+T + A R + + Sbjct: 117 GVKTFPQVLANQKIMIGGVMITTQQIAIFAITIGLMLLLQFIVRKTKVGRAMRAVSVDAD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I+P M + + GG+ Sbjct: 177 AARLMGVNVDMTISYTFAIGSALAGAAGVLVGLYYNSINPLM-GMLPGVKAFIAAVFGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + + V L G + + + + + Sbjct: 236 GIIPGAMFGGFFIGIVETLVSGYGSSLYKDAVVYIILIIILVVKPAGLL 284 >gi|170732231|ref|YP_001764178.1| urea ABC transporter permease protein UrtC [Burkholderia cenocepacia MC0-3] gi|169815473|gb|ACA90056.1| urea ABC transporter, permease protein UrtC [Burkholderia cenocepacia MC0-3] Length = 395 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 95/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 52 VAIGIGVPLAALVAPEASAFHLSAYTMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 112 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWNGTQHLAWALALVVLVPA 171 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 231 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 232 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 292 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 352 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 384 >gi|77404666|ref|YP_345240.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|221218331|ref|YP_002524358.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|77390316|gb|ABA81499.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|221163358|gb|ACM04324.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 337 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 102/313 (32%), Gaps = 26/313 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 I + LI +FA +++ G GL S +AIGAY Sbjct: 35 APGLVNPGILFVIGMTLIQAVFALSWNLLFGFTGLASFGHAGFFAIGAYFTGAALRYDFH 94 Query: 91 SIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 +L + V+ ++ + +G+ +LK + +I + P + G Sbjct: 95 LPFLAVLAVAGLLGALVALAIGVVALKRLTGIFLAVLTVALTEAMAKIIGFSPALGEQDG 154 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + R + + + Y L+ L + + W+ + + Sbjct: 155 LGNIPRP----------VIEMGLFQIDLTHGDDYYRFLVVATVLIVAALWWVVHSRLGRT 204 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 +R IR++ + + ++ +F +S +AGA A ++ D + + Sbjct: 205 FRAIREDADRARFVGIDVARYRVISFMISGGTAALAGALSAPLTRIVTLDQVNWLASTQP 264 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 I +LGG TS +A + G ++ L Sbjct: 265 ILNSLLGGFTSFWGPIVGSAAFSTINYFTRGF---------------PGLSEIMVGGILV 309 Query: 330 LVILMRSHSLLRL 342 +VIL+ +L L Sbjct: 310 VVILVAPTGILGL 322 >gi|332561553|ref|ZP_08415866.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] gi|332274055|gb|EGJ19373.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] Length = 337 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 102/313 (32%), Gaps = 26/313 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 I + LI +FA +++ G GL S +AIGAY Sbjct: 35 APGLVNPGILFVIGMTLIQAVFALSWNLLFGFTGLASFGHAGFFAIGAYFTGAALRYDFH 94 Query: 91 SIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 +L + V+ ++ + +G+ +LK + +I + P + G Sbjct: 95 LPFLAVLAVAGLLGALVALAIGVVALKRLTGIFLAVLTVALTEAMAKIIGFSPALGEQDG 154 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + R + + + Y L+ L + + W+ + + Sbjct: 155 LGNIPRP----------VIEMGLFQIDLTHGDDYYRFLVVATVLIVAALWWVVHSRLGRT 204 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 +R IR++ + + ++ +F +S +AGA A ++ D + + Sbjct: 205 FRAIREDADRARFVGIDVARYRVISFMISGGTAALAGALSAPLTRIVTLDQVNWLASTQP 264 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 I +LGG TS +A + G ++ L Sbjct: 265 ILNSLLGGFTSFWGPIVGSAAFSTINYFTRGF---------------PGLSEIMVGGILV 309 Query: 330 LVILMRSHSLLRL 342 +VIL+ +L L Sbjct: 310 IVILVAPTGILGL 322 >gi|323486967|ref|ZP_08092282.1| hypothetical protein HMPREF9474_04033 [Clostridium symbiosum WAL-14163] gi|323399739|gb|EGA92122.1| hypothetical protein HMPREF9474_04033 [Clostridium symbiosum WAL-14163] Length = 293 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 99/307 (32%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ +G ++ + S G S + + Sbjct: 5 SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDIIMVGGFTVFTIVSTAGGSPVVGV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 S ++ G+ + + + +A LI + +L + G + Sbjct: 65 LASVVVCTVLGVTIEKVAYRPLRGASPLAVLITAIGVSYLLQNVALLIFGSNARQFTSVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + ++ + ++ ++ +T I A + ++ Sbjct: 125 TLPALKLAG---------GKLSISGVTIVTIITCVIIMLALTTFINKTKIGQAMLAVSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ S+ +AG ++ ++P I + G Sbjct: 176 KGAATLMGINVNGTIAVTFAIGSSLAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + F L +V+L+R Sbjct: 235 GIGSIPGAMIGGILLGVIENLAKAYISSQLADAIVFS-------------VLIIVLLVRP 281 Query: 337 HSLLRLR 343 +L + Sbjct: 282 TGILGKK 288 >gi|319763599|ref|YP_004127536.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330824135|ref|YP_004387438.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317118160|gb|ADV00649.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329309507|gb|AEB83922.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 297 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 116/302 (38%), Gaps = 41/302 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 S+ +LIY + A ++V+ G S+ AIGAY+ IL +G S L I Sbjct: 8 YSSVLDHVLIYTLLAMSQAVVL-RAGTFSIGPAAFAAIGAYTSAILAVTHGWSAPLAIAS 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++G +M P + RG + A+ATL + ++ I W +TNG GI + Sbjct: 67 GTLLAGVVSALMAYPLSRLRGVFQALATLALVQVMVTIAQNWDSVTNGVLGISGIPKAAT 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G LL + L + L + ++ A IR ++ Sbjct: 127 TG-------------------------WLLLIVALCMLLTWTLGKFSLGRAMDVIRADET 161 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 SL + + + A +S F G+AGA A + ISP+ F F + ++ +LGG Sbjct: 162 VAVSLGIRVAYHQRLAMVLSGLFAGLAGALHAFNSYAISPEEFGFHMLVHALASSVLGGA 221 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 TS+ +L + E Y + L L+I+ H Sbjct: 222 TSIWGPLVGAGVLTTLPEFVRFFADY---------------RGVVQGALLMLIIIYLPHG 266 Query: 339 LL 340 + Sbjct: 267 IA 268 >gi|254416412|ref|ZP_05030165.1| amino acid or sugar ABC transport system, permease protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196176850|gb|EDX71861.1| amino acid or sugar ABC transport system, permease protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 391 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 108/351 (30%), Gaps = 32/351 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + ++ V LL + + + S+ + L + A + ++ G GLL Sbjct: 16 RKRRQSLLIEGGVVTLIALLLIIVFPLVLSDFRLSLLGRFLALAIAALAIDLIWGYTGLL 75 Query: 67 SLNCVIAYAIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIM 110 SL I +A+G Y+ + + W P + +I+ Sbjct: 76 SLGHGIFFALGGYALAMHLTLAPLEGDSLPEFMSLYGVDKLPWFWQPFDSFGFAVFAVII 135 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 + YL I F + + +L+ + + Sbjct: 136 VPAVVGGLFGYLVFRNRIRGVYFSILTQAATIVFF--NFFNGQQKLFNGTNGLTNYQTLL 193 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 + + Y + + + +S ++ WL + IRD++ Sbjct: 194 GADVNATRTQFIFYTITILLLVVSYALCRWLTQGRFGYLLVAIRDDENRVRFSGYNPTGF 253 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 K+ FA+S+ G+AGA F +SP + +I ++ V +GG +L + Sbjct: 254 KVLVFAISAGLAGIAGAMFTLQTGIVSPKAMDIAFSIEMVIWVAVGGRATLVGAILGALV 313 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + +F LV+ + ++ Sbjct: 314 VNFAKSILSE--------------NFAESWLFFQGGLFLLVVTVLPSGIVG 350 >gi|167628617|ref|YP_001679116.1| branched-chain amino acid abc transporter, permease component [Heliobacterium modesticaldum Ice1] gi|167591357|gb|ABZ83105.1| branched-chain amino acid abc transporter, permease component [Heliobacterium modesticaldum Ice1] Length = 293 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 96/303 (31%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GAY ++ + + Sbjct: 8 LINGLSLGSIYALIALGYTMVYGIIRLINFAHGDVYMVGAYVGFFATTQG-WGFLPSLII 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G+++ + K IA LI + L + G + Sbjct: 67 SMVVCAILGVVIERLAYKPLRGAPKIAVLITAIGVSFFLENGGVLAVGAKIRTFPNVFQE 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + V+ +++ L + + T A R + + + Sbjct: 127 VQYHFFN---------GSVVITNRQIVIMVVTVLLMLLLQYIVHYTKTGKAMRAVSHDTQ 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + FA+ S+ AG + I+P M + ++GG+ Sbjct: 178 AAMLMGINVDNTISATFAIGSSLAAAAGVLVGIYYNAINPYM-GIMPGLKAFVAAVVGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L + L G + + F L ++++++ Sbjct: 237 GVIPGAFVGGLSLGVIEALVSGYGQSLYRDAVAF-------------ALLIIILIVKPSG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|66043865|ref|YP_233706.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] gi|63254572|gb|AAY35668.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] Length = 304 Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P Sbjct: 9 MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGVESFPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F S FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAWRFEVGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|293603116|ref|ZP_06685550.1| ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292818510|gb|EFF77557.1| ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 328 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 124/324 (38%), Gaps = 19/324 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA + L+L ++ + + LIY + A L +V+G ++S + + +G Sbjct: 15 LAGLTVLILLPAAALASGSPFLIGVVTRFLIYGLAAVSLDLVIGYGAMVSFGHAMFFGLG 74 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ I+ + + + + I + + +A F I Sbjct: 75 GYAVGIIAFHTAEAGPIFGWAGSNAALVVWPIALIVCALAGWVFGYLALRTRGVQFIMIT 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + + ++ G + + P + + YYV L + + Sbjct: 135 LAFGQMVY----FILVSLQFYGGDDGLMIPQRNVLPGINLESPLVFYYVCLALLTAWTLL 190 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + + +R++++ +L +LSAF +S+ G+AG +A ++ Sbjct: 191 CIRITNSRFGMVLQALRESERRAVNLGVAPTPYRLSAFVLSAVGTGLAGVLWANYAGLVT 250 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PDM ++++ +++IVILGG+ +L A+ +G+ ++ + ++ Sbjct: 251 PDMAAWTKSGELMAIVILGGVGTLLGPIAGAAVFLGLEQMLSSLTEHW------------ 298 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 M L LV+L L Sbjct: 299 ---LLYMGPILVLVVLWGQKGLFG 319 >gi|225387090|ref|ZP_03756854.1| hypothetical protein CLOSTASPAR_00840 [Clostridium asparagiforme DSM 15981] gi|225046834|gb|EEG57080.1| hypothetical protein CLOSTASPAR_00840 [Clostridium asparagiforme DSM 15981] Length = 289 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 120/313 (38%), Gaps = 40/313 (12%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y ++ ++ ++ + ++G G+ S+ +GAY+ +L L + +++ Sbjct: 2 SYYSAVLTSAIVNIIAILSMYTLMGLTGIFSMGQAAFMCVGAYTTGMLAIHSQLPMAVIV 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +S ++ C +++G P +K R DY+A+ T+ E +L IT G GI R Sbjct: 62 LISILMGMFCALLVGFPVVKLRRDYIAMITMGFGEAIVALLNNMSNITGGANGINNIPRK 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++ + + + + +R+ ++++ Sbjct: 122 -------------------------MTLWLGVIVLVAVLVVTMNFKRSKYGRYCIAVKND 156 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + ++ + KL AF +S +AG+ A + + P F F+++I IS V +G Sbjct: 157 ELSAAAMGINVAKVKLIAFVFASGITALAGSLLAYTTTYVEPTAFGFAKSIDWISFVFVG 216 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL+ + I + E+ + Y + + LV+ Sbjct: 217 GVNSLTGTLFSGLIFCTLPEILRFADMY---------------RIIVQCSIVLLVVNFLP 261 Query: 337 HSLLRLRTPSNFL 349 + L ++ Sbjct: 262 NGLFGEHEFTDVF 274 >gi|163789415|ref|ZP_02183854.1| branched-chain amino acid ABC transporter permease protein [Carnobacterium sp. AT7] gi|159875269|gb|EDP69334.1| branched-chain amino acid ABC transporter permease protein [Carnobacterium sp. AT7] Length = 292 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 93/289 (32%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GA+ + LS + + + Sbjct: 8 LINGLSLGSIYALIALGYTMVYGIIKLINFAHGDIYMVGAFVGYTAINTLQLSFFPALIL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+ + + K + +A LI + +L G Sbjct: 68 SMVFCAILGVAIERIAYKPLRNATRVAALITAIGMSYLLQNGMIYLVGSE---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I+ + + + + L ++ L +++T + A R + + Sbjct: 118 -TRAFPQVIKNKVYEFAGLQVSQTQIMIFATTIILMLALQLIVQKTKMGKAMRAVSTDAD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S+ G AG + I M ++ + +LGG+ Sbjct: 177 AARLMGINVDNVISFTFALGSSLAGAAGVLVGLYYNSIE-PMMGYAPGLKAFIAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + + + L G + + + + Sbjct: 236 GIIPGAMFGGFAIGIIETLVSGYGGSLIKDAVVYLILIIILIFKPSGLL 284 >gi|237798304|ref|ZP_04586765.1| inner-membrane translocator [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021156|gb|EGI01213.1| inner-membrane translocator [Pseudomonas syringae pv. oryzae str. 1_6] Length = 304 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 85/304 (27%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P Sbjct: 9 MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGVESFPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ S FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAWRIEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLVNSDYKDVFSFG-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|288549790|ref|ZP_05968163.2| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Enterobacter cancerogenus ATCC 35316] gi|288317395|gb|EFC56333.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Enterobacter cancerogenus ATCC 35316] Length = 305 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 89/304 (29%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 10 LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLALLSFFGLQSFPL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 70 LILGTLVFTIVVTGVYGWTIERIAYRPLRNSTRLAPLISAIGMSLILQNYVQLSQGPRQQ 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + F FV ++L+ + + T + R ++ ++K Sbjct: 130 GVPTMLDGVLRFHLGDGFVQITYTKVFILIASFAGMLLLTWIISSTRLGRMCRAVQQDRK 189 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A G+AG + + F I + +LGG+ Sbjct: 190 MASILGINTDRIISMVFVIGAAMAGLAGVLITMNYGTFDFYV-GFVIGIKAFTAAVLGGI 248 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL GM + + F L ++++ R Sbjct: 249 GSLPGAMLGGLILGVAEAQFSGMVNSDYKDVFSFG-------------LLVVILIFRPQG 295 Query: 339 LLRL 342 LL Sbjct: 296 LLGR 299 >gi|167565274|ref|ZP_02358190.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia oklahomensis EO147] gi|167572372|ref|ZP_02365246.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia oklahomensis C6786] Length = 308 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVSAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALIVSVVVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDMSVPVLISGAFDIHVGGDFDVTVPYARLLIVCVTIVLMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ + L F + + + G + +++P F I Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|27376561|ref|NP_768090.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27349702|dbj|BAC46715.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 105/360 (29%), Gaps = 38/360 (10%) Query: 8 LNKYDKILCLLAVVYPLL------LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 L++ I L+ +L L + Y+ ++ + + Y + A + ++ G Sbjct: 10 LDRSATIFLLVVAALGVLIPLSNLLLPAGSFLQVPTYLVALWGKYVCYAILALAIDLIWG 69 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G+LSL +A+G Y+ + R + + LP + D Sbjct: 70 YCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYGNPILPDFMVFLNYSKLPWYWYGFDM 129 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162 A L++ + + + + + D + Sbjct: 130 FWFAALMVLVVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + F ++ + L + + + + +RD + Sbjct: 190 LTDFKDILGFNVQAEGTRAALFALSCLALILGFLVCRAIVSSKLGKVLIAVRDAESRTRF 249 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L + KL F VS+ G+AGA + I+P F +I + V +GG +L Sbjct: 250 LGYRVESYKLFVFTVSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWVAVGGRGTLV 309 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A ++ ++ LV L+ ++ Sbjct: 310 GAALGAVVVNYAKTFFTS-------------GMLAPYWLFMLGALFILVTLLLPKGIVGT 356 >gi|330501699|ref|YP_004378568.1| inner-membrane translocator [Pseudomonas mendocina NK-01] gi|328915985|gb|AEB56816.1| inner-membrane translocator [Pseudomonas mendocina NK-01] Length = 363 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 96/320 (30%), Gaps = 27/320 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86 Y ++ +IL Y + A L +V G G+LSL + +A+G Y+ + Sbjct: 51 SAYSLTLVGKILCYAIVALALDLVWGYAGMLSLGHGLFFALGGYAMGMYLMRQSAGDGLP 110 Query: 87 -RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---QNILIKWKP 142 W +P + M L L L ++ Sbjct: 111 AFMSFLAWSELPWYWYGTSNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIMTQAL 170 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 G + + + R F + +++ + + S + L Sbjct: 171 TFAGMLLFFRNETGFGGNNGFTGFTRILGFDITAQSTRAALFFATVVLLVGSLYLGFRLA 230 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 231 RSKFGRVLTALRDAENRLMFCGYDPRGYKLFIWVLSAVLCGLAGALYVPQVGIINPSEMA 290 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 +++I V LGG +L ++ G+ F +F Sbjct: 291 PTQSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPEYWLF 336 Query: 323 LMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 337 ALGALFIVVTLFLPRGVVGL 356 >gi|254246115|ref|ZP_04939436.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|124870891|gb|EAY62607.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia cenocepacia PC184] Length = 395 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 95/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 52 VAIGIGVPLAALVAPEASAFHLSAYTMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 112 FALGGYAIGMYLMREIGHDGKYGSDLPDFMVFLDWHQLPWYWNGTQHLAWALALVVLVPA 171 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 231 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 232 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 292 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 352 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 384 >gi|28872032|ref|NP_794651.1| high-affinity branched-chain amino acid ABC transporter permease BraD [Pseudomonas syringae pv. tomato str. DC3000] gi|213967948|ref|ZP_03396094.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. tomato T1] gi|257482383|ref|ZP_05636424.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289623767|ref|ZP_06456721.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|298484890|ref|ZP_07002989.1| high-affinity branched-chain amino acid transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|301383735|ref|ZP_07232153.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. tomato Max13] gi|302059290|ref|ZP_07250831.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. tomato K40] gi|302131562|ref|ZP_07257552.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855285|gb|AAO58346.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. tomato str. DC3000] gi|213927291|gb|EEB60840.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. tomato T1] gi|298160577|gb|EFI01599.1| high-affinity branched-chain amino acid transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330865919|gb|EGH00628.1| high-affinity branched-chain amino acid ABC transporter permease BraD [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330963369|gb|EGH63629.1| high-affinity branched-chain amino acid ABC transporter permease BraD [Pseudomonas syringae pv. actinidiae str. M302091] gi|331009786|gb|EGH89842.1| high-affinity branched-chain amino acid ABC transporter permease BraD [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331014636|gb|EGH94692.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 304 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P Sbjct: 9 MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F S FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|71734000|ref|YP_272891.1| high-affinity branched-chain amino acid ABC transporter permease BraD [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554553|gb|AAZ33764.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. phaseolicola 1448A] Length = 304 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P Sbjct: 9 MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLDSFPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F S FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|213691650|ref|YP_002322236.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523111|gb|ACJ51858.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457739|dbj|BAJ68360.1| putative ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 604 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 133/322 (41%), Gaps = 29/322 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + L Y+ +G Q+ IY + A GL+++ GS G L +A+GAY+ Sbjct: 311 LIGAVALVSTPFFFNDYLSGVGTQVAIYAIAAVGLTLISGSAGQTILGMAGPFAVGAYAS 370 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 IL ++ + +P + +I+ ++ P +F G Y+AIAT+ + + I+ + Sbjct: 371 AILATQAHWPFLVALPAAGVIAALVASVLTFPVWRFSGHYVAIATIGVGAVMVAIIRLAE 430 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 P+T G GI G T+ + Y + + + ++ I++ + Sbjct: 431 PLTKGSLGIQGIPFPKVFGVTLYTQQMM--------------YLLDVIVLLVTLVIVMRI 476 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + + + +++A +L+ K A+A+++ F G+AG+ A I P +F Sbjct: 477 RTAHLGRVFEAVGSDREASEALSIRTGAYKALAYALAAFFAGLAGSLLAHQYTYIDPTIF 536 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + +I++++I++LGGM S + +LIG EL + + Sbjct: 537 NSNMSILILTIIVLGGMNSPLGAVLGSIVLIGAPELLRFASDARILLYGVLLVLVIL--- 593 Query: 322 TLMVIALFLVILMRSHSLLRLR 343 R L + Sbjct: 594 ------------FRPQGLFARK 603 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 96/302 (31%), Gaps = 25/302 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I Y + A G+S++ G + + A+G LGS +G I ++ Sbjct: 9 LIHGSAYALVAVGMSLIFGVTNVANFAQGSIVAVGMMIAWWLGSSWGWGIVPTFVAVLVV 68 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + G+IM + + IA L+ + +L + G Sbjct: 69 TALLGLIMNVAIIAPLEGRKPIAALLATIGVGQVLDNGLQVVFGPQ-----------TRP 117 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 L++ + + V + ++ + +L+ A R + +A Sbjct: 118 FPKLLQTYNLQVAGVRFGTSDIVMVTLAVLSMLGLWAFLKFGKAGQAIRATSQDPEAAMQ 177 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + + +F + + G++G F I+ M + + +GG+ S+ Sbjct: 178 MGIPVKAIRNLSFVIGAVLAGVSGIFVGLFNGNIN-PMNGGTIGMTAFVAATIGGLGSIP 236 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G + H + AL ++++++ LL Sbjct: 237 GA-------------VVGGLVLGVVEAFGISLFGDGAHDLITFGALIIILIVKPQGLLGP 283 Query: 343 RT 344 +T Sbjct: 284 KT 285 >gi|299134112|ref|ZP_07027305.1| inner-membrane translocator [Afipia sp. 1NLS2] gi|298590859|gb|EFI51061.1| inner-membrane translocator [Afipia sp. 1NLS2] Length = 326 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 64/331 (19%), Positives = 129/331 (38%), Gaps = 25/331 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++A LL + + S+ +ILI+ +FA +++ G +GLLS + + Sbjct: 1 MVAFAAFLLTVPWTIPALINSFWVSVIAEILIWSLFAASANLLFGYVGLLSFGQALFFGF 60 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y I + GLS W + S A ++ G+ +++ Y AI T++ S IF + Sbjct: 61 GMYGVAIGIDQLGLSFWPAFGLGIAASMAMALVAGVFAVRLTWHYFAIITVVFSLIFYFL 120 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + K +T G GI + F + F YY +L + Sbjct: 121 AVSMKWLTGGDDGINFSLPPTFSL----------GSAQWSLADANFQYYFILATVAVCFL 170 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + +++ A+ +R+N + + +L+AF ++ G++G FA Sbjct: 171 LMRLVIGSSLGKAFLAVRENDVRASLIGLNVYLIRLTAFVMAGFLAGVSGVLFAFFGRYA 230 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 S + + + I+GG +L T + I + E+ + Sbjct: 231 SATYMFYHVSGEGLVWAIVGGAGTLFGPVIGTTVFIIIREVVSSHWEH------------ 278 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 H+ ++ + LV++ L+ L + Sbjct: 279 ---HSLIVGVLAILVVIFAPKGLVGLWRETV 306 >gi|316934564|ref|YP_004109546.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315602278|gb|ADU44813.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 323 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 114/326 (34%), Gaps = 32/326 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++A ++ + T + +Q L + + A ++++G GLLS + Sbjct: 21 MIAFGIMTVVLAVVPFTGVYPFFV---MQGLCFALLACAFNLLIGYGGLLSFGHAMFLGT 77 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 Y +GL L I V S ++ GL +++ +G Y A+ TL +S++ I Sbjct: 78 AGYVSGHALKVWGLPPELAIVVGTGASFCLAVVTGLIAIRRQGIYFAMITLALSQLLYFI 137 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ ++ + + F + +Y+V+L L Sbjct: 138 YLQA--------------PFTHGEDGIQGIPQGKLFGFIDLSNATTLYFVVLAGFLLGFL 183 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 II + + IR+N+ SL KL AF +S G AG+ Sbjct: 184 IIYRAINSPFGEVLKAIRENEPRAISLGYKTDQYKLLAFILSGTLAGFAGSLKVFVAQNA 243 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 S ++ + ++ + ++GG+ ++ ++I + + G Sbjct: 244 SLTDVHWTMSGEIVLMTLVGGLGTIFGPVVGAFVIIAMQQYLAGF--------------- 288 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 289 GQWVTVIQGVIFVACVLTFRRGIVGE 314 >gi|146338136|ref|YP_001203184.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146190942|emb|CAL74947.1| Putative branched-chain amino acid ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 387 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 106/360 (29%), Gaps = 38/360 (10%) Query: 8 LNKYDKILCLLAVVYPLL------LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 L++ I L+ +L L A + Y+ ++ + + Y + A + ++ G Sbjct: 10 LDRGASIFLLIVAACGILIPLSNLLLPAGSALQVPTYLVALWGKYVCYAILALSIDLIWG 69 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G+LSL +A+G Y+ + R + + LP D Sbjct: 70 YCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYGNPILPDFMVFLNYSKLPWYWHGFDM 129 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162 A L++ + + + + + D + Sbjct: 130 FWFAALMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + F ++ + L+ I + + + IRD + Sbjct: 190 LTDFKDILGFNVQADGTRAALFALSCLALILAFLICRAVVSSKLGKVLIAIRDAESRTRF 249 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L + KL F +S+ G+AGA + I+P F +I + V +GG +L Sbjct: 250 LGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWVAVGGRGTLV 309 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A ++ ++ +V L+ +L Sbjct: 310 GAALGAVVVNYAKTFFTS-------------GVLAPYWLFMLGALFVMVTLLLPKGILGT 356 >gi|313109853|ref|ZP_07795787.1| LOW QUALITY PROTEIN: putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|310882289|gb|EFQ40883.1| LOW QUALITY PROTEIN: putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 359 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 90/304 (29%), Gaps = 13/304 (4%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS- 86 A Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 39 PADSALHLSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMR 98 Query: 87 ---------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 W +P + + + L L A + + Sbjct: 99 QASGDSLPAFMTFLSWNELPWYWVGTQHFLWALCLVVLVPGALAFAFGYFAFRSRIRGVY 158 Query: 138 IKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 AG+ + R + FP + ++ + + S Sbjct: 159 FSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGTRAALFLATVALLAAS 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L R+ +RD + KL + +S+ G+AGA F Sbjct: 219 LLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQVG 278 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I+P + +I V LGG +L ++ G Y+ L Sbjct: 279 IINPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFLGALF 338 Query: 315 SFNM 318 Sbjct: 339 IVVT 342 >gi|284041902|ref|YP_003392242.1| inner-membrane translocator [Conexibacter woesei DSM 14684] gi|283946123|gb|ADB48867.1| inner-membrane translocator [Conexibacter woesei DSM 14684] Length = 320 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 74/341 (21%), Positives = 133/341 (39%), Gaps = 28/341 (8%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MS L L+ L LLL + Y S + IY GL+++ Sbjct: 1 MSALRLHLSTPRGRALLRFAPAALLLVALVAPFALAPYQVSQLTTVWIYATAVLGLNLLT 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G +S +AIGAY+ IL R L L +P A+++ G+ +GLP+L+ RG Sbjct: 61 GHTGQISAAQGGFFAIGAYTAAILLDRGLLPPLLTLPAGALVALLAGVALGLPALRLRGL 120 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ TL ++ + + + +T G G+ ++ S + + Sbjct: 121 YLALVTLAVAVVVPVVAKRADGLTGGAGGM--------------TVDTLAAPTWSGLADD 166 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 ++Y V + + + + + R A A +RD + + I KL AF VS+A Sbjct: 167 QYLYLVAVALAVAGFGLAVRMTRGASGRALTAVRDGEVTAAVVGVNIARVKLQAFGVSAA 226 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 + G AGA + + ++P+ F ++ +I+GG +L + V Sbjct: 227 YAGAAGALYTLAVGFVAPESFTLLLAFAFLTAMIVGGARTLVGALVGALFIEYVPATAAD 286 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + AL L + + ++ Sbjct: 287 VDPSLTG--------------VVYGAALLLCVYLLPAGIVG 313 >gi|110834844|ref|YP_693703.1| branched-chain amino acid ABC transporter permease [Alcanivorax borkumensis SK2] gi|110647955|emb|CAL17431.1| branched-chain amino acid ABC transporter,permease protein [Alcanivorax borkumensis SK2] Length = 380 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 91/329 (27%), Gaps = 36/329 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84 + +M + L Y A GL + G G+LSL I + +G Y + Sbjct: 34 DAFRLNMVGKYLTYAFAALGLVLCWGRSGILSLGQGIFFGLGGYCMAMFLKLEASSPENT 93 Query: 85 -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + S A L + + + Sbjct: 94 SIQSTPGIPDFMDWNQLTALPWFWEPFHSFSFTLIAVVAVPAILALIIGVAMFKRRVGGV 153 Query: 144 TNGKAGIYVA----------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 +A + L + + +Y+V +GM FL Sbjct: 154 YFAIITQAIAAILTILIIGQQGFTGGVNGITDLRTLMGWDIRSDEAKTALYFVCVGMLFL 213 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 I W+ + + +RD + + K+ F +++ F G+ GA F Sbjct: 214 CLMIGRWVMHSKLGRILLAMRDQEDRVRFSGYDVASFKIFVFCLAAMFAGVGGAMFTLQV 273 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ + +GG SL I+ + F Sbjct: 274 GFMSPTFVGIVPSIEMVVLCAVGGRNSLLGAVYGALIV--------------NAAKTGFS 319 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 SF M V+L L L Sbjct: 320 ESFPELWLYAMGALFIGVVLAFPDGLAGL 348 >gi|34763792|ref|ZP_00144706.1| Branched-chain amino acid transport system permease protein livH [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237742528|ref|ZP_04573009.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. 4_1_13] gi|27886430|gb|EAA23691.1| Branched-chain amino acid transport system permease protein livH [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430176|gb|EEO40388.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. 4_1_13] Length = 299 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 91/306 (29%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95 I + IY + + G ++V G L++ IGAY+ + + GL IW Sbjct: 11 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPIWAT 70 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + ++ G + + + + I+ LI + L Sbjct: 71 VIPAIIVCAVIGCLAERIAYRPLRNSPRISNLITAIGVSLFLENVFMKVFTPNTRSFPKI 130 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + I ++ LS + L++++T A Sbjct: 131 FDQAPISFGANIH----------ISFGAIVTIVITLVLSIGLQLFMKKTKYGKAMIATSQ 180 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S + + ++ +I P M I +L Sbjct: 181 DYAASELVGINVDKTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 239 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L F L +V+L + Sbjct: 240 GGIGILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIVVLLFK 286 Query: 336 SHSLLR 341 +L Sbjct: 287 PTGILG 292 >gi|293397103|ref|ZP_06641377.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291420574|gb|EFE93829.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 357 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 95/336 (28%), Gaps = 27/336 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ Sbjct: 33 FLALLPAEHPLAISTYTLTLVGKILCYAVVAVALDLVWGYAGLLSLGHGLFFALGGYAMG 92 Query: 83 IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + S S ++ L + A Sbjct: 93 MYLMRQAAGDGLPAFMSFLSWSELPWFWSGTQYFAWALCLIVLVPGGLAWLFGYFAFRSK 152 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + ++ G + + + F + + ++ + Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFSITATGTRVALFLATVL 212 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + S ++ L R+ +RD + KL + +S+ G+AGA + Sbjct: 213 LLVASLALGFALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALY 272 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I+P + +I V GG +L I+ G Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVAFGGRGTLVGPLLGAGIVNGAKSW------------ 320 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + + LV L ++ L Sbjct: 321 --FTMAIPEYWQLFLGLMFILVTLFLPRGVMGLLRR 354 >gi|295680881|ref|YP_003609455.1| inner-membrane translocator [Burkholderia sp. CCGE1002] gi|295440776|gb|ADG19944.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 329 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 12/297 (4%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 + LG + ++ I +FA L +++G G++SL + +GAYS Sbjct: 25 IIFWIAALGVCVMPLNNYLLLNEMAILALFAVSLDLILGYAGIVSLGHAAFFGLGAYSAA 84 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L + + L + +S ++ G++ + ++ + TL ++ I + K Sbjct: 85 LLAKYFNVDPLLGMLLSCGVAALAGLVTSVLVMRGSDLTRLMVTLGVASILHELANKLGW 144 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ + G F ++ Y + F+ I + Sbjct: 145 LTGGADGMTGVPMVPLFG------------HIEFDLFGKVAYTYSVVTLFVLFVIGRAVV 192 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ + + IR N ++ + + + + +S+A+ G+AGA A + S D+ Sbjct: 193 KSPFGMSLQVIRQNPLRAAAMGVPVNLRRTAVYTLSAAYAGVAGALLAQTTGFASLDVLD 252 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F + V+ ++++GG L + + + + Y+ + + Sbjct: 253 FHRSADVLLMLMIGGAGYLYGGIIGAVVFRFMQDRLADITPQYWQFWIGLLLVIIVI 309 >gi|239623758|ref|ZP_04666789.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521789|gb|EEQ61655.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 293 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 97/307 (31%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IG+Y + S G + I Sbjct: 5 NYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGSYVVFVTVSTMGFPPLVGI 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V+ + GM + + K +A LI + +L + G + Sbjct: 65 LVAVLACTLLGMTIERIAYKPLRGASPLAVLITAIGVSYLLQNVALLIFGADTKSFTSVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +L + + ++ ++ A + ++ Sbjct: 125 TIPAIKLAD---------GQMTITGETIVTILTCIIIMLGLTTFINKSKAGQAMLAVSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +AG ++ ++P I + G Sbjct: 176 RGAATLMGINVNGTIALTFAIGSALAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + + F L +V+L++ Sbjct: 235 GIGSIPGAFIGGILLGVIEILSKAYISSQMSDAIVFS-------------VLIIVLLVKP 281 Query: 337 HSLLRLR 343 +L + Sbjct: 282 TGILGKK 288 >gi|149926226|ref|ZP_01914488.1| putative amino-acid transmembrane abc transporter protein [Limnobacter sp. MED105] gi|149825044|gb|EDM84256.1| putative amino-acid transmembrane abc transporter protein [Limnobacter sp. MED105] Length = 321 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 98/315 (31%), Gaps = 16/315 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------G 89 + + + IY + A G ++V G LGL++ IGA + + Sbjct: 8 LINGLVLGSIYALVALGYTMVYGVLGLINFAHGEVVMIGAMVAFSAITLFLGLFPETPGW 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + + + + + + + + +A LI + IL I G+ Sbjct: 68 MLFLVGVLCAVPVCMLVSFSIERFAYRPLRNAPRLAPLISAIGVSIILQTLAMIIWGRNY 127 Query: 150 IYVAD-RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 + V +++ L + + +T + Sbjct: 128 LIFPATLPTDPIVLHTFAPSLESDYERIVSITPVQLLIVVVSAALMFGLTYTVNKTRLGK 187 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A R +N + + + F + +A G+AG AA+ ++ F + Sbjct: 188 AMRATSENPQLAGLMGINANSVIAATFVIGAALAGVAGVMVAANY-SVAHFYMGFLPGLK 246 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 + +LGG+ ++ +L V L G L + L Sbjct: 247 AFTAAVLGGIGNIYGAMLGGLLLGIVESLGAGYLGQLTGGFLG-----SHYQDIFAFAVL 301 Query: 329 FLVILMRSHSLLRLR 343 LV+ +R LL R Sbjct: 302 ILVLTLRPSGLLGER 316 >gi|157413251|ref|YP_001484117.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus str. MIT 9215] gi|157387826|gb|ABV50531.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus str. MIT 9215] Length = 376 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 96/343 (27%), Gaps = 31/343 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L+ L+ + T + ++ + L + A G+ ++ G GLLSL I +A Sbjct: 12 IILSFWIILIALVIAAPTLLPVFRLNLLGRYLSLSIVALGVDLIWGYTGLLSLGQGIFFA 71 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +G Y + S + + Y A I+ + Sbjct: 72 LGGYCAAMYLQITSSSEFPNNIPEFFALYGVEKLPFFWEPFRSPVYTFFAIWIIPALVAG 131 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTV-----------------RSLIRFFRFPSSFVI 178 ++ K + L + + F Sbjct: 132 LIGFLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSES 191 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + +++ + + WL + N IRD++ + K F+++ Sbjct: 192 MQRIFFWITAILVIAAWFFAKWLVKGRFGNILIGIRDDEPRVRFTGYNPVIFKTIIFSIA 251 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 G++GA + +SP +I ++ V +GG +L + L Sbjct: 252 GGLAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLGAILGAVFINYAKSLV 311 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+ +L Sbjct: 312 SE--------------ALPASWMFIQGGLFILVVTSLPEGVLG 340 >gi|145589382|ref|YP_001155979.1| inner-membrane translocator [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047788|gb|ABP34415.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 380 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 99/344 (28%), Gaps = 32/344 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L+ V L+ Y S+ +I+ + + A L +V G G+LSL + +A Sbjct: 38 VLIGVPIFSLVVPETSMFFMSAYALSLIGKIMCFAIAALALDLVWGYCGILSLGHGLFFA 97 Query: 76 IGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 IG Y + + G +++ L Sbjct: 98 IGGYIMGMYLMRQIGTEGVYKSELPDFMVFLDWKELPWFWKGSEHFGWMLLMLILVPGVI 157 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + A + +I + + + R + S Sbjct: 158 SWVFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRILGYSISAP 217 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ V + S + L + + +RD + + KL + + Sbjct: 218 STRVTLFIVTFLVLLGSFILCRALVTSKMGRVITAVRDAESRLMFCGYNPLGYKLFIWVL 277 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+ +AGA F I+P + +I + V +GG +L + G Sbjct: 278 SAILCAIAGALFVPQVGIINPGEMSPTNSIEMAIWVAVGGRGTLLGPIIGAFAVSGAKSF 337 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +F + + LV L + LL Sbjct: 338 --------------FTTNFAEYWLFFLGMMFVLVTLFLPNGLLG 367 >gi|328957956|ref|YP_004375342.1| high-affinity branched-chain amino acid transport system permease protein [Carnobacterium sp. 17-4] gi|328674280|gb|AEB30326.1| high-affinity branched-chain amino acid transport system permease protein [Carnobacterium sp. 17-4] Length = 292 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 93/289 (32%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GA+ + + LS + V Sbjct: 8 LINGLSLGSIYALIALGYTMVYGIIKLINFAHGDIYMVGAFVGYTAINSFNLSFLPALIV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ + K + +A LI + +L G Sbjct: 68 SMIFCAVLGVLIERIAYKPLRNATRVAALITAIGMSYLLQNGMIYLVGSE---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I + + + + L ++ L +++T + A R + + Sbjct: 118 -TRAFPQVIENKVYEFAGLQVSQTQIMIFSTTIILMLALQLIVQKTKMGKAMRAVSTDAD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S+ G AG + I M ++ + +LGG+ Sbjct: 177 AARLMGINVDNVISFTFALGSSLAGAAGVLVGLYYNSIE-PMMGYAPGLKAFIAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + + + L G + + + + Sbjct: 236 GIIPGAMFGGFTIGIIETLVSGYGGSMIKDAVVYLILIIILIFKPSGLL 284 >gi|294784953|ref|ZP_06750241.1| high affinity branched-chain amino acid ABC transporter, permease protein [Fusobacterium sp. 3_1_27] gi|294486667|gb|EFG34029.1| high affinity branched-chain amino acid ABC transporter, permease protein [Fusobacterium sp. 3_1_27] Length = 299 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 91/306 (29%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95 I + IY + + G ++V G L++ IGAY+ + + GL IW Sbjct: 11 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPIWAT 70 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + ++ G + + + + I+ LI + L Sbjct: 71 VIPAIIVCAVIGCLAERIAYRPLRNSPRISNLITAIGVSLFLENIFMKVFTPNTRSFPKI 130 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + I ++ LS + L++++T A Sbjct: 131 FDQAPISFGANIH----------ISFGAIVTIVITLVLSIGLQLFMKKTKYGKAMIATSQ 180 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S + + ++ +I P M I +L Sbjct: 181 DYAASELVGINVDKTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 239 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L F L +V+L + Sbjct: 240 GGIGILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIVVLLFK 286 Query: 336 SHSLLR 341 +L Sbjct: 287 PTGILG 292 >gi|260584960|ref|ZP_05852704.1| hydrophobic amino acid uptake (HAAT) family ABC transporter permease LivH [Granulicatella elegans ATCC 700633] gi|260157390|gb|EEW92462.1| hydrophobic amino acid uptake (HAAT) family ABC transporter permease LivH [Granulicatella elegans ATCC 700633] Length = 293 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 97/288 (33%), Gaps = 11/288 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G++ L++ Y +GA+ + GL+I+L + + Sbjct: 8 LVNGVALGSIYALVALGYTMVYGTIKLINFAHGDVYMMGAFVGFYAMNGLGLNIFLSLLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ + K +A LI + +L G Sbjct: 68 AMVSCAVLGVVIERVAYKPLRRSTRVAALITAIGVSFLLENVMSYLFGAEIRPFPSDFGT 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + + L A + + T + A R + ++ Sbjct: 128 TNYTLFGNVTINGKQI----------LIFATTVILMALLQFIVHYTKMGKAMRAVAVDED 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S+ G+AG A + S M + +LGG+ Sbjct: 178 AAQLMGIDVDQVISFTFALGSSLAGIAGVLVALYYNTYSATM-GIVPGLKAFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 S+ ++ + L + F + + + F + + Sbjct: 237 GSIPGAMIGGYVIGLLETLVSYLGFSPYKDGVVYFLLFVILLVLPAGL 284 >gi|254466118|ref|ZP_05079529.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium Y4I] gi|206687026|gb|EDZ47508.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium Y4I] Length = 352 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 128/342 (37%), Gaps = 13/342 (3%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 +K + ++ L+ +I I+++ +++G G++S Sbjct: 9 DKPRSAVLTAVLLVILICLAGAPFIFDGVRPLDTAARICIFILLVASYDLLLGYGGIVSF 68 Query: 69 NCVIAYAIGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + + +GAY + + G A + +++GL SL+ R + A+ Sbjct: 69 AHTMFFGLGAYGVALASTHMGRGFDALLAGSLAGAAAAVVLALLIGLFSLRVRAIFFAMI 128 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++ ++ ++ IT G+ G+ + S R F + + + YY Sbjct: 129 TLAVASAVAVLVSQFSGITGGEDGLTYNIP-----RVLTSANRMGEFLGTRITGKTLNYY 183 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++ + ++L + + + IR+N ++ +++ + A +S+A +A Sbjct: 184 LVFFASLILFLLLLRIVNSPFGRVLQAIRENDFRAEAIGYRVVWYRTVATCLSAAAAALA 243 Query: 246 GAFFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCG 300 G+ FA + PD F + ++ +V++GGM ++ A+ I + L Sbjct: 244 GSLFAIWLRYVGPDTTLSFEIMLDILLMVVIGGMGTMYGAVVGAALFILAQTYLQNLMGS 303 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L D R + I L + ++ Sbjct: 304 ASEATAGLPLIPDLLNPDRWLMWLGILFILSVYFFPSGIVGR 345 >gi|87120385|ref|ZP_01076280.1| inner-membrane translocator [Marinomonas sp. MED121] gi|86164488|gb|EAQ65758.1| inner-membrane translocator [Marinomonas sp. MED121] Length = 303 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 88/303 (29%), Gaps = 14/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y + AY I+ + P+ Sbjct: 8 LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMVSAYITAIVVALLSFFGIESFPI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + + I + Sbjct: 68 IIIGTLFITIAVTGAYGWAIEQIAYRPLRNSGRLSALISAIGMSLILQNYVQISQGARQQ 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + F FV +LL ++ ++RT + R + ++K Sbjct: 128 GIPTMLTGAVRFDVGDGFVQITYMKLVILLVAFLGMGTLTYIIQRTKLGRMCRATQQDRK 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + ++ +AG + F I + +LGG+ Sbjct: 188 MASILGINTDRVISIVFVIGASMAALAGVLITLDYGAFDFYV-GFIIGIKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L ++++ R Sbjct: 247 GSLPGAMLGGIILGVSESLFAGLISSDYKDVFSFS-------------LLVIILIFRPSG 293 Query: 339 LLR 341 LL Sbjct: 294 LLG 296 >gi|317133263|ref|YP_004092577.1| inner-membrane translocator [Ethanoligenens harbinense YUAN-3] gi|315471242|gb|ADU27846.1| inner-membrane translocator [Ethanoligenens harbinense YUAN-3] Length = 361 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 107/325 (32%), Gaps = 9/325 (2%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 LL+FL + ++++ M + L +FA L ++ G GLLSL + + IG Y Sbjct: 20 IGLLVFLAVFPLFAEEFRVEMMGRYLCLAIFALSLDLLWGYGGLLSLGHAVFFGIGGYMI 79 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPS----LKFRGDYLAIATLIMSEIFQNIL 137 + + + + + P + L A L I Sbjct: 80 GLCYQIQFGLPAFMTREKITVLPWFYLPLKNPIVAALIGIGLAALISAILGFFVFSSKIK 139 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF-----PSSFVIYEIFMYYVLLGMCF 192 + I + + + +I YYV+L + Sbjct: 140 GVFFTIITLALAQMFSQFIITEQKYTNGFNGLQSIKRFAMNHGQPLDKIEYYYVILVVAA 199 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L +WL R + +IR+N++ T K+ ++ A G++G +A + Sbjct: 200 LVFLFCMWLTRNRVGKIAVSIRENEQRLGFFGYTASHYKILIMTIAGAIAGLSGVLYAPA 259 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+ + + +V+ + +GG +L+ T + L ++ +L Sbjct: 260 TGSITVQDIGIAASTLVVVWIAVGGRGNLTGAVVGTLFINWAQSLLSDQFSSFWQLILGI 319 Query: 313 DCSFNMRHTTLMVIALFLVILMRSH 337 + ++ + + R Sbjct: 320 VLILIIFFMPNGIVGKIISLQQRRR 344 >gi|283852731|ref|ZP_06369996.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] gi|283571909|gb|EFC19904.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] Length = 359 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 108/328 (32%), Gaps = 10/328 (3%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y S+ + + I ++ + L+I+ G++G S A+GAY +L Sbjct: 23 TGVLNVYWQSVIMFMGINIILSSSLNIINGNMGEFSCGHAGFMAVGAYVSSVLSVALFTK 82 Query: 92 ---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + + +I+ +L L +A + I Sbjct: 83 SAAFGGPLLPPDLAVWLFPVILLAGALAASVVGLLVAIPSFKTRGDYLAIITIAAAYIVK 142 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 + + ++ M +V +G F +I + Sbjct: 143 STIENIGIIGGARGFMGMGGVMSAMTATADLPWIMIWVFVGTVFS-VWLIRRFIYSTFGK 201 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 I ++ A ++ KL AF VS G+AG FA ++P F ++ Sbjct: 202 GVDAIAQDEIAAEIMSVNTNHVKLVAFMVSCGLAGLAGGLFAHILGYVNPGTFTILKSTE 261 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF------NMRHTT 322 ++ +V LGGM SLS A ++ ++E + + L + Sbjct: 262 IMVMVYLGGMGSLSGSVLAAILMTLLIEYLRDAFGFINSFLHFVSVIPDSYEVTQVWKWV 321 Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L L++ R ++ R S+ Sbjct: 322 LIPLLLVLLMQFRPEGIMGRRELSDVFP 349 >gi|86158848|ref|YP_465633.1| chain amino acid ABC transporter inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85775359|gb|ABC82196.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Anaeromyxobacter dehalogenans 2CP-C] Length = 368 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 146/352 (41%), Gaps = 19/352 (5%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 R + ++ LL V + + Y+ MG+ + + V+ ++V G G Sbjct: 10 PSRAPRGYSVVGLLVFVAAVAALAIFPQFVKKPYVLHMGVLLFLAVIQGQAWNVVGGYAG 69 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 S+ + +GAY ++L ++ W + + S +++G + + RG Y + Sbjct: 70 QYSVGHAAYFGVGAYVTMMLLEVNKIAPWWGVWAAMAASVLLSLVIGSITFRLRGPYFVL 129 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 A++ ++EI + + +K +T G G + + I + Y Sbjct: 130 ASISVAEIIRLATLYFKDLTRGAEGFLLGEIPTMNLL----------GNEILFIGKRPFY 179 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 +V LG+ ++ ++ ++ + + ++ IR++Q A SL + F K A ++S+A + Sbjct: 180 FVGLGLAVVAVAVNWVVQHSKLGYYFQAIREDQDAAHSLGINLSFYKNVALSISAALTAL 239 Query: 245 AGAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 AG F+A I P+ F ++ ++ + I+GG+ ++ +L+ + E+ Sbjct: 240 AGGFYAMFVKFIDPNTVFGLDVSVQIVLLCIIGGIGTIIGPVIGAVVLVPLSEILRNPKG 299 Query: 304 YYFNSLLKFDCSF--------NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 +L D F + H + I + LVIL +L + + Sbjct: 300 LVQVGVLPPDSGFVTFVERYLSNAHLLVYGILVVLVILFAPEGVLGVIRRAA 351 >gi|289672628|ref|ZP_06493518.1| inner-membrane translocator [Pseudomonas syringae pv. syringae FF5] gi|330899920|gb|EGH31339.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str. M301072PT] Length = 304 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P Sbjct: 9 MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGVESFPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLIFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F S FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAWRFEVGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|302185463|ref|ZP_07262136.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. syringae 642] gi|330951501|gb|EGH51761.1| high-affinity branched-chain amino acid ABC transporter permease BraD [Pseudomonas syringae Cit 7] Length = 304 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P Sbjct: 9 MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLIFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F S FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAWRFEVGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|83749555|ref|ZP_00946542.1| LivM [Ralstonia solanacearum UW551] gi|207722109|ref|YP_002252547.1| transmembrane protein [Ralstonia solanacearum MolK2] gi|83723791|gb|EAP70982.1| LivM [Ralstonia solanacearum UW551] gi|206587283|emb|CAQ17867.1| transmembrane protein [Ralstonia solanacearum MolK2] Length = 328 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 118/298 (39%), Gaps = 15/298 (5%) Query: 46 ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105 +L +V+FA ++++G GLLS + Y L L+ L + Sbjct: 35 VLCFVLFASAFNLLLGYTGLLSFGHAAFFGGAGYMAGYLMRDLHLTPELGLVAGTAAGAL 94 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 G+++GL +++ +G Y A+ TL ++++F ++ T G+ G+ R Sbjct: 95 IGLVVGLLAIRRQGIYFAMITLALAQMFYFFCLQAP-FTGGEDGLQGVPR---------- 143 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 F + ++ +YY +L + + +I+ + + I++N+ SL Sbjct: 144 ---GKLFGVLDLSSDLTLYYFVLVVVVAAFLVIVRTIHSPFGQILKAIKENEPRAISLGY 200 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 KL AF +S+A G+AGA + ++ + VI + ++GG+ LS Sbjct: 201 DTDRFKLLAFVLSAALSGLAGALKTLVLGFETLTDVHWAMSGSVILMTLVGGLGILSGPI 260 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCS-FNMRHTTLMVIALFLVILMRSHSLLRL 342 A++I + + + + TT+ + +L ++ Sbjct: 261 LGAALVIALENKLGDIGTFLAGVTGVDGFNVLGESVTTVTGAIFVICVLTFRRGIMGE 318 >gi|312958718|ref|ZP_07773238.1| branched-chain amino acid ABC transporter permease protein [Pseudomonas fluorescens WH6] gi|311287261|gb|EFQ65822.1| branched-chain amino acid ABC transporter permease protein [Pseudomonas fluorescens WH6] Length = 355 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 96/324 (29%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 Y ++ +IL Y + A L +V G G+LSL + +A+G Y+ + Sbjct: 43 PLHVSAYTLTLVGKILCYAIGALALDLVWGYAGMLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + + L L L + + Sbjct: 103 SELPAFMTFLSWTELPWYWAGTDHFLWALCLVVLAPGSLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F + ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFGITEPGTRAVLFTATVLLLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G+ F +F Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPE 328 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + +V L ++ L Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352 >gi|171912706|ref|ZP_02928176.1| branched-chain amino acid ABC transporter, permease protein [Verrucomicrobium spinosum DSM 4136] Length = 307 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 92/307 (29%), Gaps = 10/307 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L ++ + +GA+ + + + L Sbjct: 8 LLNGLFLGAIYALIALGYTMVYGVLRFINFAHGDVFMLGAFGGLYVHKALEPLLNSLPWP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+ + +L +Y A L ++ + + Sbjct: 68 LALAVVMLASMAICAALGIAIEYFAYRPLRNRPRLNVLITAIGVSLFIEYTGQLVFGATQ 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + R + + V++ L + + RT + A R + N Sbjct: 128 -QPFPALIPRQNISGLGGLTVTMTQVIVVVVTTALLVGLRYIVMRTRLGLAMRALSLNPT 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + F + SA G +A+ + P M I +LGG+ Sbjct: 187 AAALMGVNTSVVISFTFGLGSALAAAGGILYASLYPSVDPFM-GIQPGIKAFVAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ A I+ V L G + + + + L L++L + Sbjct: 246 GNIPGAALGGMIIGVVETLVTGYSQKLG--------IPSGYKEGVAFVILILILLFKPSG 297 Query: 339 LLRLRTP 345 LL Sbjct: 298 LLGKVER 304 >gi|220923341|ref|YP_002498643.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219947948|gb|ACL58340.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 344 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 109/309 (35%), Gaps = 13/309 (4%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + I L + L + L L A Q + I Y + A L+++VG GL+S Sbjct: 2 RAGLIRDLAVALVSLGVLLALPALFPQPALRDFLIYFFAYGLLAMSLNLLVGLTGLVSFG 61 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 +A GAY++ +L +S+ L + + +++G ++ + Y A TL Sbjct: 62 HAAYFASGAYAFGLLMQSGRVSVPLAALAAIGGTALLALVIGAICVRLKEIYFAFITLAF 121 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 +I++ W +T G G +R I F + +Y Sbjct: 122 QMFIHSIIVTWVSLTGGDQG-------------LRGGIPRPPFLGIDLNDARVLYGACAV 168 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L + + ++ R IRDN L + AKL F + A + G Sbjct: 169 LFVLCVLAMRQVSQSPFGYTLRMIRDNPARANFLGVNVAAAKLGIFVFAGAMASVGGLIL 228 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A P+ ++ + I +++LGG T +L + Y+ L Sbjct: 229 ALFVSGAYPEFAFWTTSGEAIFMIMLGGTKLFLGPLVGTLLLQTLNHYVTIYTEYHGLVL 288 Query: 310 LKFDCSFNM 318 + Sbjct: 289 GTVILLIVL 297 >gi|153007251|ref|YP_001381576.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] gi|152030824|gb|ABS28592.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] Length = 359 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 68/353 (19%), Positives = 131/353 (37%), Gaps = 56/353 (15%) Query: 7 RLNKYDKILCLLAVVYPLLLFL-FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 RL + + + V P++ L A + + + + I I + V+ A L++V G G Sbjct: 6 RLRAFLRSVAPFLVGLPIVFALQAFLAAQGRDDLSFLLISIGVNVILAVSLNVVNGFTGQ 65 Query: 66 LSLNCVIAYAIGAYSYVILGSRY--------------GLSIWLLIPVSAMISGACGMIMG 111 SL A+GAY+ + + L + + + G+++G Sbjct: 66 FSLGHAGFMAVGAYTAAKITLALSDVQLAFLPGWLSDQVFFALALSAGMLTAAIAGVLVG 125 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 +PSL+ RGDYLAI TL EI ++++ + + G+ RL Sbjct: 126 MPSLRLRGDYLAIVTLGFGEIIRSVIENMRFL-GQATGLSGLPRLTN------------- 171 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + + + L ++ A IR+++ A ++ K Sbjct: 172 ------------LTWVGAGVIATVVMARRLALSSQGRALFAIREDEVAAEAMGVDTTGYK 219 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 + AF +++A+ G+AG +P F F +I V++ V+LGG+ S++ + A+L Sbjct: 220 VRAFVIAAAYAGLAGGLIVHVLQLATPRSFTFIRSIEVVAFVVLGGLGSVTGSILSAAVL 279 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 ++E + Y + R + R Sbjct: 280 TWLLERLRDIQQYRMVGYALLLIVLMLL---------------RPQGIFGTRE 317 >gi|330984536|gb|EGH82639.1| high-affinity branched-chain amino acid ABC transporter permease BraD [Pseudomonas syringae pv. lachrymans str. M301315] Length = 304 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P Sbjct: 9 MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F S FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLFEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|295675758|ref|YP_003604282.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. CCGE1002] gi|295435601|gb|ADG14771.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. CCGE1002] Length = 401 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 102/349 (29%), Gaps = 32/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I+ L V + L+ A Y ++ + + Y + A L +V G G+LSL Sbjct: 57 LIIVFGLGVPFAALVIPETSALHLSAYAMTLTGKFMCYAIAALALDLVWGYCGILSLGHA 116 Query: 72 IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113 + +A+G Y+ + G +++ L Sbjct: 117 LFFALGGYAIGMYLMRAIGHDGKYGSDLPDFMVFLDWHQLPWYWQGTQHLGYALLLVVLV 176 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 + + +I Y + + R FP Sbjct: 177 PAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIGGFP 236 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + + + + + + + +RD + L + + KL Sbjct: 237 ITHQGTRAALLLITFAVLIAAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 296 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 297 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIIGAFAVNG 356 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F +F + + LV L+ + ++ L Sbjct: 357 AKSF--------------FTANFPEYWLFFLGLIFVLVPLLLPNGIMGL 391 >gi|187927072|ref|YP_001893417.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|241665401|ref|YP_002983760.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|187728826|gb|ACD29990.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|240867428|gb|ACS65088.1| inner-membrane translocator [Ralstonia pickettii 12D] Length = 322 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 115/302 (38%), Gaps = 33/302 (10%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ ++L+Y M ++++G GLLS I + +G+Y+ I ++ L + + + ++ Sbjct: 32 TLATEVLVYAMAVMACNLLLGYTGLLSFGQGIFFGLGSYAVGIGLTQLALPMPVALVLAV 91 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++ ++G +++ RG Y + TL S++F + +T G G+ R Sbjct: 92 VVGAIVAAVVGWFAIRQRGTYFVMLTLAFSQMFYFLAYTTPSLTGGDNGLLDIPRP---- 147 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 +F Y + + + ++ + + IRDN++ Sbjct: 148 --------------AFAASPWAFYAFVAVLFLVVFFLVQRVTESVFGRTLLAIRDNEERA 193 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + KL AF +S A G+AGA A + + +++ + ++GG + Sbjct: 194 LAVGYNVRAFKLLAFVISGAVTGLAGALHAMLTGIAPLANIDYHVSEMILVMTVIGGTGN 253 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + A + + + + + L+ L V L L Sbjct: 254 VFASVLGAAFYVLLSDWLSSLWPRW---------------LMLLGFLLIAVSLFMQRGLF 298 Query: 341 RL 342 L Sbjct: 299 GL 300 >gi|322833435|ref|YP_004213462.1| inner-membrane translocator [Rahnella sp. Y9602] gi|321168636|gb|ADW74335.1| inner-membrane translocator [Rahnella sp. Y9602] Length = 304 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 88/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LFNGITLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIALALLSFFGLHSFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGWAIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQISQGPRQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F SFV ++L+ + + T + R ++ ++K Sbjct: 129 GIPTMLDGAFRFHIGESFVQMTYTKIFILVASLAGMLVLSWIISNTKLGRMCRAVQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A G+AG + F I + +LGG+ Sbjct: 189 MASILGINTDRIISLVFMIGAAMAGLAGVLVTMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL GM + + F L ++++ R Sbjct: 248 GSLPGAMLGGLILGIAEAQFSGMVNSDYKDVFSFG-------------LLVVILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|288918587|ref|ZP_06412936.1| ABC transporter related protein [Frankia sp. EUN1f] gi|288349987|gb|EFC84215.1| ABC transporter related protein [Frankia sp. EUN1f] Length = 892 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 126/326 (38%), Gaps = 20/326 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 L I +++ + L +++G +SL + +GAY+ Sbjct: 314 AVIALAGAVAVLLFGSAQWQDAAILSVVFGILVLSLVVLIGYANQISLAQMTVAGLGAYA 373 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 V L L L A++ G+++GLP+L+ RG LAI T+ ++ +L Sbjct: 374 AVRLDLDIHLPFVLAPVAGAVVGAVAGLVVGLPALRVRGINLAILTMGLAVAVSGVLFDS 433 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 T G AG F + V L ++A +++ Sbjct: 434 THYTGGIAGSQPHPP------------TLFGLDVDAARHPDRYGLVALFWLVVAAGVVVA 481 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +RR+ + +R N++A S+ ++ AKLSAF +SSA G AG ++ Sbjct: 482 VRRSGLGRRLLVVRTNERAAASVGISVARAKLSAFVISSAMAGAAGVLLGFRSSSVTFTQ 541 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F E+I ++S+ ++ G+T++S + G + + + Sbjct: 542 FSFLESINLVSLAVIAGVTAVSGGLLGGVLAFGGLVYLVIAKLHIG--------FVTDNY 593 Query: 321 TTLMVIALFLVILMRSHSLLRLRTPS 346 T+ AL + +L+ + + R+ Sbjct: 594 ATIFGAALVVTVLLHENGVAWRRSFQ 619 >gi|146338080|ref|YP_001203128.1| high-affinity branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146190886|emb|CAL74891.1| Putative high-affinity branched-chain amino acid transport system permease protein livM (ABC superfamily, membrane) [Bradyrhizobium sp. ORS278] Length = 338 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 30/319 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + ++L L + + +I +LIY + L+I+ G G SL YA+GAY+ Sbjct: 30 FVVVLLLLIVPLFVKNFIIFQMTMLLIYGLAVLALNILTGGSGQFSLGQSAFYAVGAYTS 89 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI--K 139 IL +Y ++ L +P++ +I G + G P+L+ G YLA+AT ++ IL Sbjct: 90 AILMEQYNVNYALTLPIAGVICFGFGFLFGQPALRLSGVYLALATFALATAMPQILKLGF 149 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ T G G+ V G + + +YY L + + Sbjct: 150 FEHWTGGVQGLVVTKPDAPFGLPMSQDMW--------------LYYFTLAITIAIYIFSV 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ A+ IRDN+ A ++ + K AF VS+ G+AG A + ++PD Sbjct: 196 NLLRSRSGRAFMAIRDNEIAASAMGIDVATYKTLAFGVSAGITGVAGGLGAIAVQFVAPD 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + I + +++GG+ L A +I V + G++ + Sbjct: 256 SYTIVLAISLFLGMVVGGVGWLPGSFVGAAFIIFVPNIAEGISKGLSGA----------- 304 Query: 320 HTTLMVIALFLVILMRSHS 338 + + LFLVI + H Sbjct: 305 ---VFGVLLFLVIFLVPHG 320 >gi|110835372|ref|YP_694231.1| branched-chain amino acid ABC transporter permease [Alcanivorax borkumensis SK2] gi|110648483|emb|CAL17959.1| branched-chain amino acid ABC transporter, permease protein [Alcanivorax borkumensis SK2] Length = 386 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 103/353 (29%), Gaps = 35/353 (9%) Query: 11 YDKILCLLAVVYPLL--LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + +L ++ +L LF A Y ++ + L Y + A L +V G G+LSL Sbjct: 18 FMGVLFGATLLVTILNQLFPADSALHVSAYTVTLLGKYLCYALLALALDLVWGYCGILSL 77 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +A+G Y+ + R + LP D A L+ Sbjct: 78 GHGAFFALGGYAMGMYLMRQIGDRGVYGNPDLPDFMVFLNWSELPWYWQGFDQFWFAALM 137 Query: 129 MSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRF 169 + + + + + + + + + Sbjct: 138 ILLVPGLLAFVFGWLAFRSRVTGVYLSIITQALTYALMLAFFRNELGFGGNNGLTDFKDL 197 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 F + + + + W+ + + +RD + + Sbjct: 198 LGFSLQSDSTRVGLLMATAVALAGAFVLCRWITGSKLGRVVLAVRDAESRARFVGYRTEH 257 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL F +S+ G+AGA + I+P F +I ++ V +GG +L Sbjct: 258 YKLWIFTLSAILAGIAGALYVPQVGIINPGEFSPLNSIELVVWVAVGGRATLYGAVIGAI 317 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + G+ + V + H L+ L Sbjct: 318 LVNYGKTVFTGI--------------MPEAWLFALGGLFVAVTVFLPHGLVGL 356 >gi|332528492|ref|ZP_08404480.1| branched-chain amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] gi|332042003|gb|EGI78341.1| branched-chain amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] Length = 325 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 65/337 (19%), Positives = 140/337 (41%), Gaps = 33/337 (9%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++L ++ + LL + +F + + + ++LI+ + A GL+ ++G GL Sbjct: 1 MKLARWLPWVALLLLA----VFPLVAPSLGLDFYVGFVRRVLIFALAAAGLNFILGFGGL 56 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 +L +GAY+ V L S WLL P + +++ ++GL +L+ RG Y + Sbjct: 57 AALGHCGFLGVGAYTLVALAHSGVHSAWLLWPAALLVAALAAALIGLVALRTRGVYFIMI 116 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL +++ + + +P G G + F + + Y Sbjct: 117 TLAFAQMLYYVAVSLRP-YGGDDGYNLVTPTSFG-------------VGLNTLNDSVFYG 162 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 V+L + + + R+ +A +RDN+ +L + +L+AFA++ G+A Sbjct: 163 VVLALFTGAMLLFNRATRSRFGHALMGVRDNETRMRALGFPVGRIQLAAFAIAGGVAGLA 222 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA + + SP M ++++ ++ +V++GG+ A+ IG+ E+ Y+ Sbjct: 223 GAMLVSHNNFASPSMMHWTQSATLLVMVVIGGVGQRWGGPVGAAVWIGLEEIVKAYTDYW 282 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++ + + L Sbjct: 283 H---------------LPLGVLLVAIVFLAPRGIAGL 304 >gi|188532831|ref|YP_001906628.1| Putative branched-chain amino acid transport system, permease component [Erwinia tasmaniensis Et1/99] gi|188027873|emb|CAO95730.1| Putative branched-chain amino acid transport system, permease component [Erwinia tasmaniensis Et1/99] Length = 357 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 95/327 (29%), Gaps = 27/327 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 41 PLAISTWTLTLVGKILCYAIVAVALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 100 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138 W +P + + L L L + +I Sbjct: 101 DGLPAFMSFLSWNELPWFWAGTQHFAWALCLIVLVPGVLALLFGWFAFRSKIKGVYFSII 160 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G + + + F I +++ + + S + Sbjct: 161 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFRIDATGTRIALFFASVLLLIASLGVG 220 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 221 FALARSKFGRVLTAVRDAENRLMFCGYHPEGFKLFVWTLSAVLCGLAGALYVPQVGIINP 280 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L I+ G F +F Sbjct: 281 GEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKS--------------GFTVAFPE 326 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 + + LV L ++ L Sbjct: 327 YWLFFLGLMFILVTLWLPRGVIGLLRR 353 >gi|170699826|ref|ZP_02890858.1| urea ABC transporter, permease protein UrtC [Burkholderia ambifaria IOP40-10] gi|170135278|gb|EDT03574.1| urea ABC transporter, permease protein UrtC [Burkholderia ambifaria IOP40-10] Length = 395 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++G +++ Y + A L +V G G+LSL + Sbjct: 52 IAIGVGVPLAALVAPESSAFHLSAYAMTLGGKLMCYAIAALALDLVWGYCGILSLGHGLF 111 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 112 FALGGYAIGMYLMREIGHEGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 171 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I + + + R F + Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRIAGFAIT 231 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + + +RD + L + + KL + Sbjct: 232 SPGTRTVLLLLTFATLVLAFIVARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+ G+AGA + I+P +I + V +GG +L + G Sbjct: 292 TLSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 352 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 384 >gi|220919493|ref|YP_002494797.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] gi|219957347|gb|ACL67731.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] Length = 352 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 109/337 (32%), Gaps = 27/337 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + +L + L L S + + + + V+ A L++V G G S Sbjct: 1 MARARAVLRSVLPFLVGLPILLGVQALSPPDYTLILVNVGVNVILAVSLNVVNGFTGQFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L A+GAY+ + + +P + + +L A Sbjct: 61 LGHAGFMAVGAYTAAKITLAFSGVQVAFLPEAV-------SDQLVFALALAASMATAAAA 113 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ ++ + G R + + Sbjct: 114 GFLVGMPSLRLRGDYLAIVTLGFGEIIRSLIENMKFLGQA-----TGLSGLPPYTNIAWV 168 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + L + A IR+++ A ++ K+ AF +SSA+ G+AG Sbjct: 169 GVSAIATVVMARRLAVSTQGRALFAIREDEVAAEAMGVDTTGYKVRAFVISSAYAGLAGG 228 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + +P MF F +I V+ +V+LGG+ S++ A +L +E Y Sbjct: 229 LIAHAILLTTPRMFTFVRSIEVVVMVVLGGLGSITGSVVAAVVLTVALEGLREFQQY--- 285 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L +++L+R + R Sbjct: 286 ------------RMVAYAAGLIVLMLLRPQGIFGTRE 310 >gi|86160675|ref|YP_467460.1| chain amino acid ABC transporter inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85777186|gb|ABC84023.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Anaeromyxobacter dehalogenans 2CP-C] Length = 352 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 110/337 (32%), Gaps = 27/337 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + +L + L L S + + + + V+ A L++V G G S Sbjct: 1 MARARAVLRSVLPFLVGLPILLGVQALSPPDYTLILVNVGVNVILAVSLNVVNGFTGQFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L A+GAY+ + + +P + + +L + A Sbjct: 61 LGHAGFMAVGAYTAAKITLAFSGVQLAFVPEAV-------SDQLVFALALAASMVTAAAA 113 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ ++ + G R + + Sbjct: 114 GFLVGMPSLRLRGDYLAIVTLGFGEIIRSVIENMKFLGQA-----TGLSGLPPYTNIAWV 168 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + L + A IR+++ A ++ K+ AF +SSA+ G+AG Sbjct: 169 GVSAIATVVMARRLAVSTQGRALFAIREDEVAAEAMGVDTTGYKVRAFVISSAYAGLAGG 228 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + +P MF F +I V+ +V+LGG+ S++ A +L +E Y Sbjct: 229 LIAHAILLTTPRMFTFVRSIEVVVMVVLGGLGSITGSVVAAVVLTVALEGLREFQQY--- 285 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L +++L+R + R Sbjct: 286 ------------RMVAYAAGLIVLMLLRPQGIFGTRE 310 >gi|326796764|ref|YP_004314584.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326547528|gb|ADZ92748.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 303 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 87/303 (28%), Gaps = 14/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y + AY + + PV Sbjct: 8 LVNGLSLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMVSAYITAVAIALLSFFGIESFPV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + S + I + Sbjct: 68 IIFGTLIFTIFVTGVYGWVIERVAYRPLRGSSRLSILISAIGMSLILQNYVQLSQGAKQQ 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ S F FV ++L+ A + +++T + R + + K Sbjct: 128 GVPTLLSGAIRFDIGDGFVQITYMKLFILVASFVGMAVLTYIIQKTKLGRMCRATQQDPK 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + + +AG + F I + +LGG+ Sbjct: 188 MASILGIDTDKIISTVFVIGATMAALAGVLVTLDYGGFDFYV-GFIIGIKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L ++++ R Sbjct: 247 GSLPGAMLGGIILGLSEALFAGLISSDYKDVFSFS-------------LLVVILIFRPSG 293 Query: 339 LLR 341 LL Sbjct: 294 LLG 296 >gi|121605356|ref|YP_982685.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120594325|gb|ABM37764.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 318 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 117/305 (38%), Gaps = 15/305 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + ++ L + + + + ++L+Y + A L+I +G GL+SL + Sbjct: 10 LIPVLLLLALAVLPPIAIGLDDNFWVAFFARVLVYAIAASALNIALGFGGLVSLGHALFI 69 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG YS + S W+ + + ++ G + GL SL+ G + TL +++ Sbjct: 70 GIGMYSVSLPAYYGVSSGWIHLGICVLVCAVVGGLTGLISLRTSGIAFIMITLAFAQMGY 129 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +++ K S+ F + + +YY G+ Sbjct: 130 FVIVSLKQYGG---------------DDGMSIATASDFLGLQLNTPLSVYYCAWGLLVAL 174 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +L LR + A R R N + S+ + +L+A+ +S+ GMAG A Sbjct: 175 TYWVLRLRTSPFGMALRAGRQNARRVMSVGLALQRYQLAAYTISAVLCGMAGMLLANLNA 234 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 SP ++ + +I +++LGG+ S+ +GV EL ++ Sbjct: 235 YASPSSMAWTVSGELIVMIVLGGLGSVFGPFLGAMAFLGVEELLKAATEHWMAVFGLAIL 294 Query: 315 SFNMR 319 M Sbjct: 295 GVAML 299 >gi|154244997|ref|YP_001415955.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154159082|gb|ABS66298.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 314 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 60/318 (18%), Positives = 114/318 (35%), Gaps = 29/318 (9%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L+ L Y S+ + I + + A GL+++ G G +SL Y +GAY Sbjct: 6 LLIAILVACLVTGGDYAISLAVVIGLQALPALGLTLLTGYTGQISLGHAAFYGLGAYGSA 65 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 ++G+ GL L + +++ + +G + +G +LA+ATL I Q ++ Sbjct: 66 LIGAALGLPALLSVIIASALVAGIAWAIGWLVFRLKGHHLAMATLAFGIIVQIAFVEMHF 125 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ + L G +I + + V+ G L+ L Sbjct: 126 LTGGPNGLSGIEPLSIFGK--------------DLITDAQVLPVVWGAVILAVLFAQNLI 171 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + R I + K SL + K +S + G +A +SP F Sbjct: 172 SSPAGLVMRAIAEGDKVVGSLGNDVAAIKRKVMMLSGFLCAVGGGLYAHYVGYLSPGPFD 231 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 ++ ++ +V LGG ++ + A + V E + Sbjct: 232 VGFSVRLLLMVALGGFANIWGVLFGVAFVTLVGEALKPL---------------GAFDVI 276 Query: 323 LMVIALFLVILMRSHSLL 340 L + ++ L+ Sbjct: 277 AYGTLLVVSVIFFPRGLM 294 >gi|297198973|ref|ZP_06916370.1| urea ABC transporter, permease UrtB [Streptomyces sviceus ATCC 29083] gi|297147252|gb|EFH28544.1| urea ABC transporter, permease UrtB [Streptomyces sviceus ATCC 29083] Length = 321 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y + A G ++V G + L++ + GA+ I Sbjct: 20 LANGLLLGSMYGLIAIGYTMVYGIVQLINFAHGEIFMTGAF----GAFTVYFYILPDGTS 75 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+ + G+ ++ A + + + + V + Sbjct: 76 MALAVPLMLIGGGIVAILIAVGAERFAYRPLRGAPRLAPLITAIGLSLALQEVVRNFYPH 135 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + + ++++ +++ ++R++ A + + Sbjct: 136 ADRAVAFPGLDATHDIGSITIKDADIFLIVAAIVCMSALAFFVRKSRTGRAMQATAQDPD 195 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + AFA+ F +A + I M F + + +LGG+ Sbjct: 196 TAQLMGIDTNRIIVIAFAIGGFFAAVAAVAYGMKYGSIDYRM-GFLMGLKAFTAAVLGGI 254 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L L L L +V+L+R Sbjct: 255 GNIYGAMLGGLVLGVAETLASAYIDDIPGMHL---FGGGSWKDVWAFCLLIIVLLVRPQG 311 Query: 339 LLRLR 343 LL R Sbjct: 312 LLGER 316 >gi|225574032|ref|ZP_03782677.1| hypothetical protein RUMHYD_02128 [Blautia hydrogenotrophica DSM 10507] gi|225038721|gb|EEG48967.1| hypothetical protein RUMHYD_02128 [Blautia hydrogenotrophica DSM 10507] Length = 803 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 40/329 (12%), Positives = 103/329 (31%), Gaps = 34/329 (10%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + + +V + + + ++ ++ + + ++ A + ++G G + Sbjct: 501 KKPRLYLFSLIAMIVLYFVCGMMSNSIFTKFGVELLAVGFAPFIFAALSQTFIIGL-GHI 559 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L + + + L ++ + RG I T Sbjct: 560 DLGVGAFMGLVNVICATILDQNTGLGIL-----CLVGLIAAYSCMGLVIHLRGVPPIIVT 614 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L MS ++ I + + G ++ F ++ Sbjct: 615 LGMSFVWTGIAYVLQDVPGGHVPDWMVSLFNFNNPVLQG--------------------- 653 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + ++ L + R+ R +N+ A + + A + ++ F M G Sbjct: 654 VLLWLIVFIALALLIYRSRYGTVLRGFGNNESAMRNSGWSKAKAYWLTYLIAGIFAAMGG 713 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 ++ S + ++ ++ VI+GG S + + G++ Sbjct: 714 IAQSS-ITAASDVNASSTYTMLTVAAVIIGG-GYFSGGVV-----THIGTVFGGISLTMI 766 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMR 335 + LL T+ + L L++ MR Sbjct: 767 SVLLGLLKVSTDYTATIQGLVLILILSMR 795 >gi|309798596|ref|ZP_07692871.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus infantis SK1302] gi|308117832|gb|EFO55233.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus infantis SK1302] Length = 318 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 77/340 (22%), Positives = 140/340 (41%), Gaps = 42/340 (12%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + L ++ L+ L + + + QI I ++ A GL+++VG G SL Sbjct: 6 KVNILWLFLLLLGYGLISLLVSVGVLNLFHIQIIEQIGINIILAVGLNLIVGFSGQFSLG 65 Query: 70 CVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIGAY+ I+GS + + + + A+I+G +++G+P+L+ +GDYLA+ATL Sbjct: 66 HAGFMAIGAYAAAIIGSKSPTYGAFFGAMLLGAIIAGLVALVVGIPTLRLKGDYLAVATL 125 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++EI + +I +TNG AGI + Sbjct: 126 GVAEIIRIFIINGGSLTNGAAGILGIPNFTTWQM-------------------------V 160 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ L R+ I ++R+++ A S+ K+ AF + +AG Sbjct: 161 YFFAVITTIATLNFLRSPIGRLTLSVREDEIAAESVGVNTTKIKIIAFVFGAVTASIAGT 220 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + P + F +I V+ IV+ GG+ S++ A +L + L + Sbjct: 221 LQSGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGAIVAAIVLGILNMLLQDV------ 274 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + +AL LV++ R LL S Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305 >gi|257095156|ref|YP_003168797.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047680|gb|ACV36868.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 307 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 89/306 (29%), Gaps = 10/306 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +GL++ IG + S + V Sbjct: 8 LINGLTLGAVYALVALGYTMVYGIIGLINFAHGEVVMIGTMVAFTVIVSLAGSGMSPLLV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ + I + A I Sbjct: 68 LGVGLLVSVVVCMILGWALERVAYRPLRHAPRLTPLITAIGMSIVLQNVAMIIWG----R 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T +I + + ++ + +I + RT I A R N Sbjct: 124 NYITFPPMIDKKIYELGGASFTNVQVAIVSLAALMMLGLIYLVHRTRIGMAMRATAQNPH 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I AF + SA +AG + + I+ F + + +LGG+ Sbjct: 184 VASLMGVDINRVIAMAFIIGSALGAVAGCMVGSYYE-IAHYQMGFMLGLKAFTAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + L G L + I L +V++ R Sbjct: 243 GNLAGAMAGGLLLGVIEALGAGYIGDLTGDFLG-----SHYQDIFAFIVLIIVLMFRPSG 297 Query: 339 LLRLRT 344 L RT Sbjct: 298 LFGERT 303 >gi|258543390|ref|YP_003188823.1| urea short-chain amide or branched-chain amino acid transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256634468|dbj|BAI00444.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256637526|dbj|BAI03495.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256640578|dbj|BAI06540.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256643635|dbj|BAI09590.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256646690|dbj|BAI12638.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256649743|dbj|BAI15684.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256652731|dbj|BAI18665.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655787|dbj|BAI21714.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 379 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 97/359 (27%), Gaps = 33/359 (9%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F + + V+ L ++ S+ + L Y + A + +V G Sbjct: 12 FPGAIRMAAVAFAVTIVLAGASLLPEANPLHVSAFVVSLAGKYLAYAILALSVDLVWGFA 71 Query: 64 GLLSLNCVIAYAIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACG 107 G+L+L +A+G Y+ + W +P + Sbjct: 72 GILTLGHAAFFALGGYAMGMYLMREIGTRGVYGNPDLPDFMIFLSWKSLPWYWWGTDHFA 131 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 M L + L + + A + + L Sbjct: 132 WAMLLVLIVPGLLAGVFGWLAFRSRVSGVYLSIITQALTYALMLAFFQNGLGFGGNNGLT 191 Query: 168 RFFRFPSSFVIYEIFMYYVLLG---MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 F + + + +L+ + + WL +RD + L Sbjct: 192 DFKDILGADLHSPLTRAALLVITGFVLAACLLLSRWLVSGRFGYLLVAVRDAESRTRFLG 251 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 AKL + S+ G+ GA + I+P F + +I + V +GG +LS Sbjct: 252 YRPEQAKLLIWVFSAMVAGIGGALYVTQVGIINPGEFAPANSIESVIWVAVGGRGTLSGS 311 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 ++ L ++ L L+ LR Sbjct: 312 VLGAVLVNCGKTLFTAWLPEFWLYGLGLLFLVTTLFL--------------PQGLMGLR 356 >gi|330838330|ref|YP_004412910.1| ABC-type transporter, integral membrane subunit [Selenomonas sputigena ATCC 35185] gi|329746094|gb|AEB99450.1| ABC-type transporter, integral membrane subunit [Selenomonas sputigena ATCC 35185] Length = 295 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 93/303 (30%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GAY + GL I + + Sbjct: 11 LINGVSLGSIYALIALGYTMVYGIIKLINFAHGDIYMVGAYLGFFAVTNLGLPIVPALIL 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+G G+++ + K I+ LI + L Sbjct: 71 AMIITGLLGIVIEKLAYKPLRHAPRISALISAIGVSLFLEYAMMYFVSPTPRTFPPLF-- 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F ++ +L CFL + ++ T I A R + + Sbjct: 129 ---------QDVAFSVGSLVINGQQMLILGITCFLMVVLTYIVQYTKIGKAMRAASYDTE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + S+ +AG + I P M I +LGG+ Sbjct: 180 TAQLMGINADRVISFTFWIGSSLAAVAGVLVGVYYNSIDPLM-GIMPGIKAFVAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L IL V G F F L LV+L + Sbjct: 239 GILPGAVAGGLILGIVEAFVSGFVSSTFRDAAAF-------------AILILVLLFKPAG 285 Query: 339 LLR 341 L Sbjct: 286 LFG 288 >gi|85705518|ref|ZP_01036616.1| hypothetical protein ROS217_01810 [Roseovarius sp. 217] gi|85669943|gb|EAQ24806.1| hypothetical protein ROS217_01810 [Roseovarius sp. 217] Length = 368 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 101/346 (29%), Gaps = 28/346 (8%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 ++K L L + L + + + ++ + +Y M A +S+ GS G+L++ Sbjct: 7 HNKTLQWLFYIAVLAVLGAVPLISNDAFLLNQLAIYGVYGMLAVSISLCWGSGGILNMGQ 66 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 IA+ +GAY + + + P ++ P + Sbjct: 67 GIAFGLGAYCMAMTMQMQTQADGTIPPFMLNNGLDSLPLLWQPFQNTSTGIFLALFVPTV 126 Query: 131 EIFQNILIKWKPITNGKAGIYVA--------------DRLYFLGTTVRSLIRFFRFPSSF 176 I + +G + + + Sbjct: 127 FYLIFGGIMFTARVSGPFFAIMTLATLSAFATIFVDLQPYTNGVNGISPPSSLKLGQTEI 186 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 Y Y+ + + + ++ R ++D+ + L + + + Sbjct: 187 DPYSSGAYWFVFALLAACTVAAKLINQSRFGLIVRALKDDPERVRFLGYNVAIYETLVYT 246 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S +AG+ FA +SP F+ +I ++ V LGG SL + G Sbjct: 247 LSGLIAAIAGSCFAVLTQYVSPAQFEVGFSISIVIWVALGGRNSLIWAMFGAFTVQGAQS 306 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F ++ + LV+ L L Sbjct: 307 YV--------------GDQFLSTWILILGFSFILVVRFLPGGLAGL 338 >gi|226310201|ref|YP_002770095.1| branched-chain amino acid ABC transporter permease [Brevibacillus brevis NBRC 100599] gi|226093149|dbj|BAH41591.1| probable branched-chain amino acid ABC transporter permease [Brevibacillus brevis NBRC 100599] Length = 348 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 101/315 (32%), Gaps = 24/315 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-----------VILGSR 87 + +Y + A G ++V G L +++ + +GA+ + G Sbjct: 41 LVDGLTLGFMYAVVALGYTMVYGILEIINFAHGDIFMVGAFIGTEVLLISDALGALEGMN 100 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 +++++ + ++ +++GA G+ + + + + LI + +L Sbjct: 101 PFVALFITLIIAMVLTGALGVGIERIAYRPLRGAPRLVPLISAIGVSFLLQDLVRF---- 156 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 A +L S V++ + ++ L++ +T Sbjct: 157 ---TEALARNEFYLNSPALFTGSIPLGSIATIPTKGLIVIVIAIIMMIALTLFVNKTKWG 213 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 A R + +Q + + + F + S+ G G FA + I P F + Sbjct: 214 IAMRAVAQDQSTASLMTINVNKVIMLTFLIGSSLGGATGVLFAQNYGTIDPY-IGFILGL 272 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ +L +L + L N Sbjct: 273 KAFTAAVLGGIGNLRGAMIGGVLLGLLESLSGAFMGPLTNGAFG-----AEYKDVFAFSI 327 Query: 328 LFLVILMRSHSLLRL 342 L LV+L + L Sbjct: 328 LILVLLFKPEGLFGE 342 >gi|189499667|ref|YP_001959137.1| inner-membrane translocator [Chlorobium phaeobacteroides BS1] gi|189495108|gb|ACE03656.1| inner-membrane translocator [Chlorobium phaeobacteroides BS1] Length = 280 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 22/298 (7%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107 IY++ ++++ G GLLSL+ Y IGAY+ +L +G S ++ +S +I+ Sbjct: 4 IYIILGLAMNLLAGYSGLLSLSQAAFYGIGAYTTTVLLVYFGYSFPAVLAMSVIINVIAC 63 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + + + S++FR + +ATL I +L W +TNG GI + G SL Sbjct: 64 IPVIVFSIRFRDLFFVLATLAWQVIVFTVLYNWISVTNGPYGIGGIPKPVVFGYAFESLP 123 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 F ++ +C L ++ +S ++ +RD+Q A S Sbjct: 124 HFS--------------FLAGVVCVFVLLFFYGLHQSPLSRYFQGVRDDQLAMLSFGKKP 169 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + K A ++SS +AGA FA+ I P F +E+I++ISIV++GG+ ++ Sbjct: 170 GYYKAIAVSISSGASAIAGALFASYYSYIDPTSFTLNESILIISIVLIGGLGTMRGSVAG 229 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + E+ +N D + + + L L++L R + Sbjct: 230 ALFYVLLPEVLRFVNVP--------DAVASNLRMMIYALILILMVLFRPYGFFGNYRF 279 >gi|241206166|ref|YP_002977262.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860056|gb|ACS57723.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 333 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 117/345 (33%), Gaps = 27/345 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + ++L + + ++ +++ + L +V G G+ + Sbjct: 12 FQHRRGFIGRDLIGIAVILAVAAIGYFAFPDNLALLTRMITIALLVLSLDLVTGYCGVAT 71 Query: 68 LNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L + GAY+ IL + Y L++ G++ G L+ G + + Sbjct: 72 LGHAALFGSGAYAAGILSAHYGINDPLLMMLAGIAGGAVAGLLCGAIILRAHGLPQLVLS 131 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + +F K T G G+ G F +Y ++ Sbjct: 132 IALINLFHEFANKASSWTGGSDGLSGIAPDPVFGL------------FEFDLYGHTAFFF 179 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + + ++ L R+ R I+ + ++ + A + +A+S A G+ G Sbjct: 180 GMALLLIVFVLLRVLVRSPFGMLCRAIKQDPLRIRAMGASPKAALIRMYAISGAVAGVGG 239 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A A S + D F+++ + +++LGG SL T I + + N +++ Sbjct: 240 ALNAISTQVVGLDSLSFTQSAEALVMLVLGGTGSLFGALSGTLIFMLFEDYVSAANPFHW 299 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T++ L V+L L R Sbjct: 300 --------------LTMVGALLIAVVLFAPKGLYGTAAAFVGRRR 330 >gi|300693058|ref|YP_003749031.1| leucine/isoleucine/valine transporter permease subunit (transmembrane ABC transporter) [Ralstonia solanacearum PSI07] gi|299075095|emb|CBJ34377.1| leucine/isoleucine/valine transporter permease subunit (transmembrane abc transporter) [Ralstonia solanacearum PSI07] Length = 299 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 118/302 (39%), Gaps = 41/302 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ + + I + A + + + S GLL++ IGAY+ +L + + + Sbjct: 11 YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +I+G P+L+ G YLA+ATL E+ + +++ + T G G+ +L Sbjct: 70 GMAAPAVVALIIGGPTLRLSGVYLAMATLGFGEVVRVLILNTESWTGGALGLNSIPQLTE 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L+ ++ LRR+ + A+ I++++ Sbjct: 130 WWH-------------------------VALAVVLTLFVLARLRRSKVGRAFEAIKEDET 164 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + KL AF + + G+AGA A I P + F + ++++ ILGG Sbjct: 165 AAGLMGINVAGTKLLAFVLGAMIAGLAGALNAHLTFFIGPAEYGFDRGVEILTMAILGGT 224 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L+ + IL + EL + + + L L++L Sbjct: 225 SGLAGPVLGSVILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269 Query: 339 LL 340 + Sbjct: 270 IW 271 >gi|70734101|ref|YP_257741.1| branched chain amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348400|gb|AAY96006.1| probable permease of ABC branched chain amino acid transporter PA4912 [Pseudomonas fluorescens Pf-5] Length = 304 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 89/304 (29%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLIFTVVVTGIYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGAKQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + + FV ++L+ A + ++ T + R + ++K Sbjct: 129 GVPTLLAGAWKVDIGTGFVQLTYTKIFILVAAFAGMALLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGVLITMNYGTFDFYA-GFVIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|149203797|ref|ZP_01880766.1| inner-membrane translocator [Roseovarius sp. TM1035] gi|149142914|gb|EDM30956.1| inner-membrane translocator [Roseovarius sp. TM1035] Length = 412 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 101/359 (28%), Gaps = 30/359 (8%) Query: 5 SLRLNKYDKILCLLAVVYPLLLF--------LFLGATKSQKYIDSMGIQILIYVMFAWGL 56 + + + V L F F + + I IY + A GL Sbjct: 63 PTLTRAWQALPWIAVVAVFLFAFRAADPDNVCFTSGAFVTSQLVNGLIMGTIYGLMALGL 122 Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI------WLLIPVSAMISGACGMIM 110 +++ +G++S + Y IG + + + V+ I A Sbjct: 123 ALIFSIIGIVSFSHGEFYMIGGMVVYYMTEVWAPGLGPIAAVIAACAVTFGIGAAFERAF 182 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF- 169 P + + ++++ L +G + + + + Sbjct: 183 FTPIYAGKVERPNEYAILVTFGLAFFLQYLVQGLSGANPVKASPFFELPRSEWPAGAPII 242 Query: 170 -----FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + + + ++I +L T A R +++A Sbjct: 243 ETTRSNIELFDTISISTPRLTAAILSVVMLLALIWFLYNTWTGRALRATAQDRQAAAVAG 302 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + AF + G+AGA + + + I++LGG+ SL Sbjct: 303 INPGRMNMLAFGLGCMLAGLAGAVLVQAFSWLPQT--GAIPALRAFVIIVLGGLGSLPGA 360 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 IL V G + +I L LV+L+R L + Sbjct: 361 FIGGLILGLVEAAGAG--------CVPDPTRAAAYLPAYGMIILTLVLLLRPQGLFGRK 411 >gi|318057770|ref|ZP_07976493.1| branched-chain amino acid ABC transporter permease protein [Streptomyces sp. SA3_actG] gi|318079480|ref|ZP_07986812.1| branched-chain amino acid ABC transporter permease protein [Streptomyces sp. SA3_actF] Length = 382 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 101/323 (31%), Gaps = 19/323 (5%) Query: 5 SLRLNKYDKILCLLAVVYPLL-------LFLFLGATKSQKYIDSMGIQILIYVMFAWGLS 57 + + +A+V + + L + L++ A G Sbjct: 18 PDPKRRLLRWWPAVALVVLFVLPYGTVEVPGLLDGPVGSAGSLQLLALCLLFGGLATGYD 77 Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 +++G GLLS + +A G+Y+ GL WL + ++ A ++ G SL+ Sbjct: 78 LLLGRTGLLSFGHALYFAAGSYATNTFLREAGLPFWLAAVLGLVLGVAVALLFGAVSLRV 137 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 G ++ TL ++ ++ + G + + + Sbjct: 138 TGIGFSMVTLAFAQAASLLVSRDPGGFTG------------GEEGISAPGDALPGSLVGI 185 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +Y++ L L +++ + W I++N++ L KL AF V Sbjct: 186 GNTANLYWIALAFLVLCLAVVHRTTHSPTGRVWEGIKENERRVEVLGLRPYGFKLVAFVV 245 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + + G +P + ++ +V+LGG + + Sbjct: 246 AGTLAALGGIVHLLLTGGSTPATTTSEFTLSLLVMVVLGGSGTRWGPMLGGILYTWADHR 305 Query: 298 CCGMNFYYFNSLLKFDCSFNMRH 320 + + L + Sbjct: 306 LGDLANSATVADLPGALRVPLSQ 328 >gi|312879502|ref|ZP_07739302.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] gi|310782793|gb|EFQ23191.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Aminomonas paucivorans DSM 12260] Length = 284 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 112/310 (36%), Gaps = 43/310 (13%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ S+ I ++ GLSI G GL S IGAY IL Y + L + Sbjct: 2 NYVLSIVTLAGINMIAVLGLSIFTGFTGLFSFGHAAFVGIGAYVSAILTYYYFVPFPLAL 61 Query: 97 PVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 + +GA +++G+P+ K R DY AIA L E + +L + Sbjct: 62 GAGVVAAGAVSLVIGVPTLRAKLRSDYFAIAILGFGEALRVLLENLEITNGA-------- 113 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 I +++ S + + +R Sbjct: 114 ------------------RGLPGIEPFTTLPLVVLCLAGSVWVARNFLLSRFGQGCIALR 155 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++ A + A+L + VS+AF G++G A + P MF +++ ++++ VI Sbjct: 156 EDPVAAEMAGVHLFRARLLSLVVSAAFCGLSGGLLAHYLSFVQPVMFTLTQSTMLLAAVI 215 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 GGM S+S A+ + I + E M + L L++L Sbjct: 216 AGGMGSISGPLIASFLFIALPEALR---------------VAQMWRLVAYGLVLVLIMLF 260 Query: 335 RSHSLLRLRT 344 R L+ + Sbjct: 261 RPQGLMGYQE 270 >gi|119900020|ref|YP_935233.1| ABC transporter permease [Azoarcus sp. BH72] gi|119672433|emb|CAL96347.1| ABC transporter permease protein [Azoarcus sp. BH72] Length = 310 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 100/304 (32%), Gaps = 7/304 (2%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + + +Y + A G ++V G LGL++ +GA + + + P+ Sbjct: 9 INGLVIGSVYALIALGYTMVYGILGLINFAHGDVLMVGAMTALQTMLFLMGVAPGMSPLV 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + I + F + LA L + LI ++ I + Sbjct: 69 MLTIALLVAIPVSMLIGFTMERLAYRRLRNAPRLAP-LITAIGMSFLLQTIAMIIWGRNY 127 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 T + + P V +++ L + L + RT I A R +N + Sbjct: 128 HTFPQLISTTPLQPVEGVFVTPVQIVIVIVSALLMIGLTLLVSRTRIGRAMRATAENHRT 187 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + F + + +AG +A++ I+ F + + +LGG+ Sbjct: 188 ASLMGVDTNAVIAFTFVIGAGLAAVAGVMYASNYG-IAHYGMGFMPGLKAFTAAVLGGIG 246 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 +L +L V G + L F + + L LV++ R L Sbjct: 247 NLGGAMVGGVVLGLVESFGAGYIEH-----LTFGFLNSSYQDIFAFLILGLVLIFRPTGL 301 Query: 340 LRLR 343 L R Sbjct: 302 LGER 305 >gi|296454524|ref|YP_003661667.1| inner-membrane translocator [Bifidobacterium longum subsp. longum JDM301] gi|296183955|gb|ADH00837.1| inner-membrane translocator [Bifidobacterium longum subsp. longum JDM301] Length = 604 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 133/322 (41%), Gaps = 29/322 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + L Y+ +G Q+ IY + A GL+++ GS G L +A+GAY+ Sbjct: 311 LIGAVALVSTPFFFNDYLSGVGTQVAIYAIAAVGLTLISGSAGQTILGMAGPFAVGAYAS 370 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 IL ++ + +P + +I+ ++ P +F G Y+AIAT+ + + I+ + Sbjct: 371 AILATQAHWPFLVALPAAGVIAALVASVLTFPVWRFSGHYVAIATIGVGAVMVAIIRLAE 430 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 P+T G GI G T+ + Y + + + ++ I++ + Sbjct: 431 PLTKGSLGIQGIPFPKVFGVTLYTQQMM--------------YLLDVIVLLVTLVIVMRI 476 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + + + +++A +L+ K A+A+++ F G+AG+ A I P +F Sbjct: 477 RTAHLGRVFEAVGSDREASEALSIRTGAYKALAYALAAFFAGLAGSLLAHQYTYIDPTIF 536 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + +I++++I++LGGM S + +LIG EL + + Sbjct: 537 NSNMSILILTIIVLGGMNSPLGAVLGSIVLIGAPELLRFASDARILLYGVLLVLVIL--- 593 Query: 322 TLMVIALFLVILMRSHSLLRLR 343 R L + Sbjct: 594 ------------FRPQGLFARK 603 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 25/302 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I Y + A G+S++ G + + A+G LGS +G I ++ Sbjct: 9 LIHGSAYALVAVGMSLIFGVTNVANFAQGSIVAVGMMIAWWLGSSWGWGIVPTFVAVLVV 68 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + G+IM + + IA L+ + +L I G Sbjct: 69 TALLGLIMNVAIIAPLEGRKPIAALLATIGVGQVLDNGLQIVFGPQ-----------TRP 117 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 L++ + + V + ++ + +L+ A R + +A Sbjct: 118 FPKLLQTYNLQVAGVRFGTSDIVMVTLAVLSMLGLWAFLKFGKAGQAIRATSQDPEAAMQ 177 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + + +F + + G++G F I+ M + + +GG+ S+ Sbjct: 178 MGIPVKAIRNLSFVIGAVLAGVSGIFVGLFNGNIN-PMNGGTIGMTAFVAATIGGLGSIP 236 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G + H + AL ++++++ LL Sbjct: 237 GA-------------VVGGLVLGVVEAFGISLFGDGAHDLITFGALIIILIVKPQGLLGP 283 Query: 343 RT 344 +T Sbjct: 284 KT 285 >gi|167837576|ref|ZP_02464459.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 344 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 95/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 1 IAVGVGVPLAALAAPESSAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 60 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 61 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLAPA 120 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 121 ALAWAFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 180 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ + S + T + IRD + L + + KL + Sbjct: 181 SPGTRTVLFLITFAALVASFVAARAIVTTKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 240 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 241 VVSAVLCGIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 300 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 301 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 333 >gi|76802701|ref|YP_330796.1| branched-chain/neutral amino acids ABC transporter permease [Natronomonas pharaonis DSM 2160] gi|76558566|emb|CAI50158.1| ABC-type transport system permease protein II (probable substrates branched-chain/neutral amino acids) 1 [Natronomonas pharaonis DSM 2160] Length = 435 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 57/387 (14%), Positives = 113/387 (29%), Gaps = 62/387 (16%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L G + + L + + A L++ G GL ++ V +G Y+ Sbjct: 32 FALSVLDQGLGSIVSTLARVTFLSLSFALVALALNLHWGYTGLFNIGVVAFMMVGVYTMA 91 Query: 83 ILGSRYGLSI---------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +L + W+ I ++ G++ LP+L+ R DYLAI TL +SEI Sbjct: 92 MLTRPPDPAFGAPGLGLPLWVGILAGVAVAAILGLLTALPALRLRADYLAIVTLGLSEIV 151 Query: 134 Q----------NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI-- 181 + ++ T + + ++ + Sbjct: 152 RLTIASGDFNEWLIENVGAGTGSATSLTFTVSPQTPIRGLYFTDAGDPTALGTAVFGVTD 211 Query: 182 ------------FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 L + + L R+ + IR+++ SL I Sbjct: 212 DLGISQSAVVDWTYILALAVVLIAVYLFLERLGRSPFGRILKAIREDEVVASSLGKDIRM 271 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF--SENIIVISIVILGGMTSLSKIAKA 287 AK+ F + A +G+ G + + +P + + VI+GG S + Sbjct: 272 AKIKVFVIGCALMGLGGILWYGAEGAANPQAMTYSPLYTFYIFIAVIVGGAGSNTGSVLG 331 Query: 288 TAILI---------------------------GVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + + + + + Sbjct: 332 GIVFASFLFEGPRRAGGFVRDRIAADVDTPENFAEAVAPFSSLDFTPFIAYATDEIAALQ 391 Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSN 347 L+ + L ++ R LL R + Sbjct: 392 FVLLGLVLIFIMHRRPDGLLGHRVETA 418 >gi|83310904|ref|YP_421168.1| branched chain amino acid ABC transporter permease [Magnetospirillum magneticum AMB-1] gi|82945745|dbj|BAE50609.1| Branched-chain amino acid ABC-type transport system, permease components [Magnetospirillum magneticum AMB-1] Length = 318 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 95/312 (30%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90 + + IY + A G ++V G LG+++ Y +GA+ +I + L Sbjct: 22 LINGLTLGAIYGLVALGYTMVYGVLGMINFAHGTIYMVGAFISLITFLVATTVLGTSVPL 81 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 ++ L + + ++ G + + +A LI + +L + G Sbjct: 82 ALVLTLVAAMALTALWGWTAERVAYRPLRSAPRLAPLISAIGVSIMLQNFVAQAQGARAK 141 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + R I V ++ L A + RTA+ A Sbjct: 142 PLPP-------VFRGGITLMDSGDFVVSLSWMQMVIMALTLALMAVFTWVITRTALGRAQ 194 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + K L + + F + + G+AG I F I Sbjct: 195 RACEQDMKMASLLGIDVDRVISTTFVIGAGLAGVAGMMVTLYYGVIDFY-IGFLAGIKAF 253 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL ++ + + + F L Sbjct: 254 TAAVLGGIGSLPGAMLGGLLIGLIEAFWSAYFSIEYKDVATFS-------------ILVA 300 Query: 331 VILMRSHSLLRL 342 V++ R LL Sbjct: 301 VLVFRPTGLLGR 312 >gi|39935347|ref|NP_947623.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] gi|39649199|emb|CAE27719.1| possible ABC transporter, permease protein [Rhodopseudomonas palustris CGA009] Length = 323 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 114/324 (35%), Gaps = 30/324 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + + ++ L L + Y + Q L + + A ++++G GLLS + Sbjct: 21 MIAFGIMTALLLVVPFTGVYPFFVM-QGLCFALLACAFNLLIGYGGLLSFGHAMFLGTAG 79 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y +GL L I + A ++ GL +++ +G Y A+ TL +S++ I + Sbjct: 80 YVSGHALKVWGLPPELAIIAGTAAAFALSVLTGLIAIRRQGIYFAMITLALSQLLYFIYL 139 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + ++ + + F + +Y+V+L L +I Sbjct: 140 QA--------------PFTHGEDGIQGIPQGKLFGFIDLSNATTLYFVVLAGFLLGFLVI 185 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + IR+N+ SL KL AF +S G AGA S Sbjct: 186 YRAINSPFGEVLKAIRENEPRAISLGYKTDQYKLLAFILSGTLAGFAGALKVFVAQNASL 245 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +S + ++ + ++GG+ ++ ++I + + G Sbjct: 246 TDVHWSMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGF---------------GQ 290 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 291 WVTVIQGVIFVACVLTFRRGIVGE 314 >gi|149204642|ref|ZP_01881607.1| ABC branched-chain amino acid transporter, inner membrane subunit [Roseovarius sp. TM1035] gi|149141901|gb|EDM29951.1| ABC branched-chain amino acid transporter, inner membrane subunit [Roseovarius sp. TM1035] Length = 335 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 63/310 (20%), Positives = 123/310 (39%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +G S I + + Sbjct: 48 FVMKLLCFALFAAAFNLLLGYTGLLSFGHSAFFGGAAYFTAHAVKEWGWSPEFGILLGVV 107 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+IMG +++ +G Y A+ TL +S++F ++ Sbjct: 108 GAAVLGLIMGAIAIRRQGIYFAMITLALSQMFFFFCLQAGFTKG--------------ED 153 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MYY +LG+ L II + + ++IR+N+ Sbjct: 154 GIQSVPRGVLFGFIDLSEATNMYYFVLGVFLLGMLIIWRIVNSPFGMILKSIRENESRAT 213 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL+AF +S+A G+AG A + + + VI + +LGG+ +L Sbjct: 214 SLGYSVARYKLAAFVMSAALTGLAGGIKALVFQFATLTDVTWQMSGEVILMTLLGGIGTL 273 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I++ + +F T + + + +L+ L+ Sbjct: 274 IGPIFGAGIVVTLQNYLATSDFPV---------------TIITGVVFMVCVLLFRRGLVG 318 Query: 342 LRTPSNFLER 351 S R Sbjct: 319 EFYASRLGRR 328 >gi|22126877|ref|NP_670300.1| inner membrane ABC transporter permease [Yersinia pestis KIM 10] gi|21959911|gb|AAM86551.1|AE013901_12 putative inner membrane permease of ABC transporter [Yersinia pestis KIM 10] Length = 337 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 101/344 (29%), Gaps = 27/344 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L V+ L L Y ++ +IL Y + A L +V G GLLSL + + Sbjct: 4 LIALIVLPFLALLPADHPLAISTYTLTLIGKILCYAVVAIALDLVWGYAGLLSLGHGLFF 63 Query: 75 AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 A+G Y+ + W +P S + L L Sbjct: 64 ALGGYAMGMYLMRQAAGDGLPAFMSFLSWSELPWFWSGSQYFVWALCLIVLVPGLLAFLF 123 Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + ++ G + + + FP S I Sbjct: 124 GYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGFPVSATSTRI 183 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 ++ L + S ++ L L RT +RD + KL + +S+ Sbjct: 184 ALFLATLALLIASLALGLALARTKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVL 243 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 +AGA + I+P + +I V LGG +L I+ G Sbjct: 244 CALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVNGAKSW---- 299 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + + LV L ++ L Sbjct: 300 ----------FTMAMPEYWQFFLGLIFILVTLFLPKGVIGLLRR 333 >gi|261420157|ref|YP_003253839.1| urea ABC transporter permease [Geobacillus sp. Y412MC61] gi|319766969|ref|YP_004132470.1| urea ABC transporter permease UrtC [Geobacillus sp. Y412MC52] gi|261376614|gb|ACX79357.1| urea ABC transporter, permease protein UrtC [Geobacillus sp. Y412MC61] gi|317111835|gb|ADU94327.1| urea ABC transporter, permease protein UrtC [Geobacillus sp. Y412MC52] Length = 352 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 94/291 (32%), Gaps = 13/291 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + LFL ++ S+ + L + + A G+S++ G G+LSL + + +GAY Sbjct: 9 WLFFAALFLAPFYLTEFRLSLLGKFLCFAIVAVGISLIWGYTGILSLGHGVYFGLGAYCM 68 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + L + + AIA + + L Sbjct: 69 AMYLKLEASQGHLPDFMEWSGVRELPWFWKPFAHPMVAIAAAIALPTLLAALLSYLTFKN 128 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRF-------------FRFPSSFVIYEIFMYYVLL 188 I + + T + F F S + +I +Y++ Sbjct: 129 RIKGVYFSLLSQAVVVVFVTLFIGKQEWTGGTNGLTNFSTVFGFSLSSPLTQIVLYWLTT 188 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 L L + IRD + L K+ +++S+AF G+AGA Sbjct: 189 ACLALIFVAARRLTSGRLGKVLIAIRDAENRVRFLGFNPTVYKVFVYSLSAAFAGVAGAL 248 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 F ISP+M +I ++ +GG SL ++ Sbjct: 249 FVLQVGLISPEMMGIIPSIEMVLWAAVGGRQSLMGAIIGAVVMNTAKSFLS 299 >gi|110668135|ref|YP_657946.1| ABC-type branched-chain amino acid transport system, permease protein II [Haloquadratum walsbyi DSM 16790] gi|109625882|emb|CAJ52322.1| ABC-type branched-chain amino acid transport system, permease protein II [Haloquadratum walsbyi DSM 16790] Length = 438 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 122/385 (31%), Gaps = 51/385 (13%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + + L L G + + + I++Y + A +++ G GL ++ V Sbjct: 31 LAAVYLLYLIAGLLLGYGLSGQLNSLRRLTFLIVLYSIGALVVNLHWGYSGLFNIGVVGF 90 Query: 74 YAIGAYSYVILGSRYGLS------------IWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 A+G Y+ IL + + I + + G I LPSL+ R DY Sbjct: 91 MAVGVYTTTILTRPVAGQNPTGTLSGLGLSLPVAIVGGVLAAALVGYIAALPSLRLRDDY 150 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF----------- 170 AI TL +EI + + + G + T + I F Sbjct: 151 FAIVTLAFAEIIRIAVKASELQEFTIFGATIGTGGGRGIRTYPNPINQFFEGTGAPIVDA 210 Query: 171 --RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 ++ L + +I+ + + + IRD+++A +L Sbjct: 211 VSSTIDGPLVSGWTFVLTLTLVLVCVLWLIIRIVESPFGRVLKGIRDDEEATTALGKNTG 270 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 K+ +F + +G G + S+ ISP +F + VI+GG S + + Sbjct: 271 SLKIRSFMIGCGILGFLGIIWQGSQGYISPGLFVPQLTFFIWIAVIIGGAGSNTGSIIGS 330 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSF--------------------------NMRHTT 322 + +G + L G + + Sbjct: 331 ILFVGTIYLGPGYVRRLIEKFISLSGQATNFPDALGMLAGGDVSGILLYTLDQTSALRVI 390 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 L I L ++ R L R Sbjct: 391 LTGILLIWLLKRRPDGLFGNRREMA 415 >gi|317125046|ref|YP_004099158.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Intrasporangium calvum DSM 43043] gi|315589134|gb|ADU48431.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Intrasporangium calvum DSM 43043] Length = 345 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 111/329 (33%), Gaps = 13/329 (3%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + P+ L L + + L+ A ++ G GLLS + Sbjct: 18 VLVYLPYLPIELPGVLPGRVNGPGSLQLLATCLVIAGVALSYDVLFGRTGLLSFGHALFV 77 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A G+Y I + + L + + I VS + +++G +L+ G A+ TL ++ Sbjct: 78 AAGSYLLTISLADWSLPLPVAIVVSLATTTLLALVVGGIALRVSGIAFAMVTLAFAQAAS 137 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I+++ G +R V + + Y++ LG +S Sbjct: 138 IIVMRNPGGVTGGEEGKSLNRSAVPDL------------LVGVAHAPYRYWLALGFVVVS 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L R+ +A IR+N+ L KL A V + G+ G A Sbjct: 186 FVAVTLLVRSRAGHAMAAIRENEARAAVLGFDTYRVKLLAIVVGAFLGGLGGVVHALVLG 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FD 313 SP + + ++ +V+LGG S + ++ F L Sbjct: 246 GSSPHVTTTEFTLALLIMVVLGGAGSTWGALLGGFLYTYADARLVELSGAGFADALPDVA 305 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + +++ L L Sbjct: 306 QQVLAEPLFVLGLFFIVIVYFAPAGLTGL 334 >gi|237654579|ref|YP_002890893.1| urea ABC transporter permease UrtC [Thauera sp. MZ1T] gi|237625826|gb|ACR02516.1| urea ABC transporter, permease protein UrtC [Thauera sp. MZ1T] Length = 414 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 98/350 (28%), Gaps = 32/350 (9%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 + + V L Y S+ +IL Y++ A + ++ G G+LSL + Sbjct: 25 AAVAWIGVPVAHLALPESHPLHVSAYTVSLLGKILCYMVVAVAMDLIWGYAGILSLGHGL 84 Query: 73 AYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 +A+G Y++ + W +P S + + L Sbjct: 85 FFALGGYAFGMYLMRQIGRDGSYGAELPDFMVFLDWKELPWYWAGSDSLLWALFLVVALP 144 Query: 118 RGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 +I + + + R Sbjct: 145 GLVAFVFGWFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRILGHDI 204 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + + ++ + + + +L + IRD + + + KL Sbjct: 205 TSPGMRVTLFALSAALLIACLVLGRYLVSSRFGRVLAAIRDAESRVMFIGYNPLHYKLFI 264 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 + +S+ G+AGA + I+P + +I + V +GG +L I+ Sbjct: 265 WTLSAMLCGLAGALYVPQVGIINPSEMSPANSIEIAVWVAVGGRGTLVGAVLGAGIVNLA 324 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + F ++ +V L ++ L Sbjct: 325 KSV--------------FTVYLPEYWPFVLGFLFIVVTLYLPDGVVGLWR 360 >gi|17547159|ref|NP_520561.1| amino-acid transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429461|emb|CAD16147.1| putative amino-acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 311 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 97/305 (31%), Gaps = 6/305 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G LG+++ IGA S + + L Sbjct: 8 IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGAMSALTAINFLQKFFPNLPDW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + + + + +A L + ++ + + Sbjct: 68 LTLVLALLFAMPVCAVVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L S+ ++L + + L + RT + A R +NQ+ Sbjct: 128 LTFPQLLPSSPIDIGSTGATITGKEIAIILVSLAVMTGLTLLVNRTKLGRAMRATAENQR 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + F + +A +AG A + M F + + +LGG+ Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + L G + + I L V+L R Sbjct: 247 GNLAGAMVGGVLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLICVLLFRPSG 301 Query: 339 LLRLR 343 ++ R Sbjct: 302 IMGER 306 >gi|227115093|ref|ZP_03828749.1| putative branched-chain amino acid transport system, permease component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 362 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 95/324 (29%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 46 PLAISTYTLTLIGKILCYAIVAIALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 105 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138 W +P + + L L + ++ Sbjct: 106 EGMPAFMSFLSWTELPWFWAGTQYFVWALCLIVLVPGVLAFVFGWFAFRSKIKGVYFSIM 165 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G + + + FP + I ++ + + S + Sbjct: 166 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRIGLFVATVLLLIASLLVG 225 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 226 FALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALYVPQVGIINP 285 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L I+ G F +F Sbjct: 286 GEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKSW--------------FTVAFPE 331 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + LV L ++ L Sbjct: 332 YWLFFLGLMFILVTLFLPRGVIGL 355 >gi|213622187|ref|ZP_03374970.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 242 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 81/241 (33%), Positives = 119/241 (49%), Gaps = 9/241 (3%) Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 + +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 1 FALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNN 60 Query: 141 KPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 IT G GI + G + FF IF+Y V L + Sbjct: 61 TEITGGPNGISQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALLLV 120 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG FAA Sbjct: 121 VLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAA 180 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + +SP+ F F+E+ V++IV+LGGM S + A +L+ EL N Y L Sbjct: 181 RQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEYSMLMLGG 240 Query: 312 F 312 Sbjct: 241 L 241 >gi|21220491|ref|NP_626270.1| branched chain amino acid transport permease [Streptomyces coelicolor A3(2)] gi|5689902|emb|CAB52065.1| putative branched chain amino acid transport permease [Streptomyces coelicolor A3(2)] Length = 310 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 98/308 (31%), Gaps = 13/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---SYVILGSRYGLSIWLL 95 + + + +Y + A G ++V G + L++ + GA+ + + G S+ + Sbjct: 8 LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMTGAFGALTVYMYILPDGTSMLIA 67 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P+ + + + + + +F L A + LI ++ A Sbjct: 68 LPLMLIGAVIVSTTVAVGAERFAYRPLRGAPRLAP------LITAIGLSLALQQAVWAWY 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 I F V + ++ + A + ++ RT + Sbjct: 122 PDAKSARPFPQIDGGPFHIGNVTLQTGDIFLFVVAPVSMAILGFFVMRTRTGRGMQATAQ 181 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + AFA+ + F + G + +I M F + + +L Sbjct: 182 DPDTAKLMGVDTDRIIVIAFALGAVFAAVGGVAYGLRYGQIEFKM-GFILGLKAFTAAVL 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ +L L S+ +++I + L R Sbjct: 241 GGIGNIYGAMIGGVVLGVAETLATAYIADVPGLDKFGSQSWADVWAFILLILVLLF---R 297 Query: 336 SHSLLRLR 343 LL R Sbjct: 298 PQGLLGER 305 >gi|329911206|ref|ZP_08275460.1| LivM [Oxalobacteraceae bacterium IMCC9480] gi|327545984|gb|EGF31071.1| LivM [Oxalobacteraceae bacterium IMCC9480] Length = 289 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 119/321 (37%), Gaps = 42/321 (13%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 +++ I + M A + + + S GLLSL IGAY+ +L + + Sbjct: 3 WWQAFWSTYNTVIFSIGVNAMLALSIYLTL-SCGLLSLANAAFMGIGAYAAAMLTMQGDV 61 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S L + + ++ +I+G+P+L+ G YLA+ATL E+ + I++ +T G G+ Sbjct: 62 SFPLALLAAGVLPALVALIIGIPTLRLSGVYLAMATLGFGEVVRVIVLNL-DVTGGPMGL 120 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 +L + L+ ++ +RR+ I A+ Sbjct: 121 NGIPLKTEFWH-------------------------ILLLLALTLYVLARMRRSKIGRAF 155 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 I+ ++ A + + KL AF + G+AG A I P + F + ++ Sbjct: 156 EAIKADEVAAQLMGINVAGYKLLAFVTGAVIAGVAGGLNAHYTFTIGPGNYAFENAVDIL 215 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++ + GG +L IL + E+ + + L + Sbjct: 216 TMAVFGGTANLIGPTLGATILTLLPEVLREFKHF---------------RLAFNGLILIV 260 Query: 331 VILMRSHSLLRLRTPSNFLER 351 VIL + +R Sbjct: 261 VILYLPKGIWDPARMRALFKR 281 >gi|206977466|ref|ZP_03238361.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|206744316|gb|EDZ55728.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] Length = 333 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 128/325 (39%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + + I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPEVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T ++ + +V+L+ L+ Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311 >gi|167584633|ref|ZP_02377021.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 308 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVSAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALIVSVLVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIALMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + + + G + +++P F I Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|221070046|ref|ZP_03546151.1| urea ABC transporter, permease protein UrtC [Comamonas testosteroni KF-1] gi|220715069|gb|EED70437.1| urea ABC transporter, permease protein UrtC [Comamonas testosteroni KF-1] Length = 409 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 100/351 (28%), Gaps = 33/351 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + L L +V + L L Y+ + + + Y + A + ++ G G+ Sbjct: 29 WTAFLLALTMVCAVAPALNLWVPEDSTLHLSDYMLGLLGKFMCYAICALAIDLIWGYTGI 88 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSI-----------WLLIPVSAMISGACGMIMGLPS 114 LSL + +A+G Y + R W +P +SG+ + L Sbjct: 89 LSLGHGLFFALGGYVMGMYLMREAAGPDALPAFMGFLDWKELPWHWALSGSFAATVLLVF 148 Query: 115 LKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 L +I + + + Sbjct: 149 LVPGLIGGLFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTGFKTLLG 208 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F + + ++ + WL R+ + +RD + + K Sbjct: 209 FSVNSQAMHVLLFALSGLALLGCFLFSRWLMRSKYGRVLQAVRDAESRTMFCGYNPLPYK 268 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 LS + +S+ G+AGA + I+P +I + +GG SL + Sbjct: 269 LSIWVISAMMCGLAGALYVPQVGIINPSEMSVGNSIEMAVWTAVGGRASLVGPIIGAFAV 328 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G + ++ +V L L+RL Sbjct: 329 NGGKSWLT--------------VAAPEYWLYVLGALFIVVTLFMPGGLIRL 365 >gi|76811037|ref|YP_334501.1| putative branched-chain amino acid transport system, permease component [Burkholderia pseudomallei 1710b] gi|167739818|ref|ZP_02412592.1| putative branched-chain amino acid transport system, permease component [Burkholderia pseudomallei 14] gi|254260862|ref|ZP_04951916.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|76580490|gb|ABA49965.1| putative branched-chain amino acid transport system, permease component [Burkholderia pseudomallei 1710b] gi|254219551|gb|EET08935.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 400 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 94/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 57 IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 116 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 117 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 176 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 177 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 236 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + S + + + IRD + L + + KL + Sbjct: 237 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 296 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ +AGA + I+P +I + V +GG +L ++ G Sbjct: 297 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFVVNGAK 356 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 357 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 389 >gi|217421225|ref|ZP_03452730.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|217396637|gb|EEC36654.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 576] Length = 400 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 57 IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 116 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 117 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 176 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 177 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 236 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + S + + + IRD + L + + KL + Sbjct: 237 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 296 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ +AGA + I+P +I + V +GG +L + G Sbjct: 297 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 356 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 357 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 389 >gi|299065963|emb|CBJ37144.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Ralstonia solanacearum CMR15] Length = 311 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 97/305 (31%), Gaps = 6/305 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G LG+++ IGA S + + L Sbjct: 8 IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGAMSALTAINFLQKFFPHLPDW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + + + + +A L + ++ + + Sbjct: 68 LTLVLALLFAMPVCAVVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L S+ ++L + + L + RT + A R +NQ+ Sbjct: 128 LTFPQLLPSSPIDIGSTGATITGKEIAIILVSLAVMTGLTLLVNRTKLGRAMRATAENQR 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + F + +A +AG A + M F + + +LGG+ Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + L G + + I L V+L R Sbjct: 247 GNLAGAMVGGVLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLIGVLLFRPSG 301 Query: 339 LLRLR 343 ++ R Sbjct: 302 IMGER 306 >gi|293604940|ref|ZP_06687337.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292816768|gb|EFF75852.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 322 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 125/328 (38%), Gaps = 29/328 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L A+ + L + + + L + + +I+ G G LS + + + Sbjct: 5 LCAIALFGVALAVLATVAQSGVLLTFVMMSLYAALLSQAWNILGGYGGQLSFGHALFFGV 64 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134 GAY+ + +G++ WL++P++ + A G+ +G + + +G Y A+ TL +E+F+ Sbjct: 65 GAYAQALGQLNFGINPWLVLPLAIALGAATGLGVGGLTFRYGLKGSYFALVTLAFAEVFR 124 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + G + + Y+LL L+ Sbjct: 125 ILALSASFTGGGVGLMVPLQ---------------EGAANMQFGSRRGYIYLLLAFVVLA 169 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + WLR + + +RDN+ A ++ + KL A+S+AF+ AGAF+ Sbjct: 170 LAATAWLRHSRFGAYLQAVRDNEDAARAIGVNPLRVKLGGIALSAAFMSAAGAFYVQVFQ 229 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I P F + ++ + I+GGM +L L G+ +L + Sbjct: 230 YIDPGIAFGSAVSVEALVGAIVGGMGTLWGPVLGAVALHGLADLTRNLFG---------- 279 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + L L+++ + Sbjct: 280 -ELPGISMVIYGVVLILIVMFLPRGISG 306 >gi|239945492|ref|ZP_04697429.1| putative D-ribose ABC transporter substrate-binding/permease protein [Streptomyces roseosporus NRRL 15998] gi|239991957|ref|ZP_04712621.1| putative D-ribose ABC transporter substrate-binding/permease protein [Streptomyces roseosporus NRRL 11379] gi|291448949|ref|ZP_06588339.1| D-ribose ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|291351896|gb|EFE78800.1| D-ribose ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] Length = 651 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 104/310 (33%), Gaps = 27/310 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 VV + + L G + + + ++G+Q + + A+G++ V+ S G + L+ A+ Sbjct: 30 ALVVLVVAMSLLSGDFLTTQNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 88 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 A + G+ + L + ++ + ACG + G + ++ Sbjct: 89 ATVLAWSATSAGVPVVLAVVLAIVTGIACGFVNGALISYGKLPPFIATLAML-------- 140 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +A L + + + ++ +L M + Sbjct: 141 -------------SIARGLSLVISQGSPIAFPESVSRLGDTLGGWLPVPVLVMIAMGLVT 187 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L L RT I + I N++A + K+ +A+S F +AG A+ Sbjct: 188 ALILGRTFIGRSMYAIGGNEEAARLSGLRVKRQKIVIYALSGLFAAVAGIVLASRLVSAQ 247 Query: 258 PDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 P + E + ++VI GG+ S IL + ++ F + Sbjct: 248 PQAAQGYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQVVI 307 Query: 313 DCSFNMRHTT 322 + Sbjct: 308 GVVIALAVLL 317 >gi|259048103|ref|ZP_05738504.1| high-affinity branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein LivH [Granulicatella adiacens ATCC 49175] gi|259035164|gb|EEW36419.1| high-affinity branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein LivH [Granulicatella adiacens ATCC 49175] Length = 293 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 97/288 (33%), Gaps = 11/288 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G++ L++ Y +GA+ L+I+L + + Sbjct: 8 LVNGLAVGSIYALIALGYTMVYGTIKLINFAHGDVYMMGAFIGYFAVMVLKLNIFLALLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ + K +A LI + +L G Sbjct: 68 AMVACAVLGVVIERVAYKPLRKSTRVAALITAIGVSYLLENVMSYFFGAESRPFPSDFGT 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ I I + A + +R T + A R + +++ Sbjct: 128 ETFTLFGDISVNGKQILIFGITILL----------MALLQFIVRYTKMGKAMRAVAVDEQ 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G+AG + IS M + + +LGG+ Sbjct: 178 AAQLMGIDVDGVISFTFALGSALAGIAGVLVGIYYNTISTTM-GITVGLKAFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 S+ ++ + + + + + + F + + Sbjct: 237 GSIPGAMVGGYLIGLLETMVSFFGYSPYRDGVVYLLLFIILIVLPAGL 284 >gi|157147156|ref|YP_001454475.1| hypothetical protein CKO_02933 [Citrobacter koseri ATCC BAA-895] gi|157084361|gb|ABV14039.1| hypothetical protein CKO_02933 [Citrobacter koseri ATCC BAA-895] Length = 329 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 100/310 (32%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----YVILGSRYGLSIW 93 + + + IY + A G ++V G L +++ +GA + V+ + + Sbjct: 21 LINGVMLGSIYALIALGYTMVYGILRIINFAHGDILMVGALTTLSAINVLNHTFPAMPQL 80 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + V+ +I+ A ++ + +F L A + I + Sbjct: 81 LQLGVALLIAMAVCALLAMAVERFAYRRLRNAPRLAPLISGIGVSVLLQTVAMIVWTRNP 140 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + + I + + + + L + T + R + Sbjct: 141 LMFPQILSMAPIAVTSGGETHPPAIITLTGIVTVGLALAVMTGLWLLVEYTRLGRGMRAV 200 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + + FA+ F +AG A++ S M F I + Sbjct: 201 AENPRVATLMGVNPNAIITLTFAIGGIFAALAGVMMASNYGNASFSM-GFLPGIKAFTAA 259 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ ++ +L + L G N + + I L LV++ Sbjct: 260 VLGGIGNIRGAMIGGILLGVIEALGAGYLGELTNGVFG-----SNYQDVFAFIVLILVLV 314 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 315 FRPAGLLGER 324 >gi|121535364|ref|ZP_01667176.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1] gi|121306056|gb|EAX46986.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1] Length = 298 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 90/289 (31%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GAY+ + + + Sbjct: 14 LINGISLGSIYALIALGYTMVYGIIRLINFAHGDIYMLGAYAGFFATTVFKWPFIPSLVF 73 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ A G+I+ + + IA LI + +L + Sbjct: 74 AMAVAAAAGIIIERAAYRPLRHAPKIAVLITAIGISLLLE-----------YGGILLVTP 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T ++ + ++ +L L + + RT + A R + + Sbjct: 123 QPRTFPAVFPAELYHFGGLVVNNQQIVILTVSLILMVVLTYVVNRTKVGKAMRAVSYDTD 182 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S+ AG + I P M + +LGG+ Sbjct: 183 AARLMGIDVDRIISVTFAIGSSLAAAAGVLVGVYYNSIDPLM-GIMPGLKAFVAAVLGGI 241 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + I+ + L G F F + + Sbjct: 242 GIIPGAMLGGIIMGIIEALVSGFISSTFRDAAAFAILIIILLFKPSGLL 290 >gi|89093399|ref|ZP_01166348.1| possible ABC transporter, permease protein precursor [Oceanospirillum sp. MED92] gi|89082378|gb|EAR61601.1| possible ABC transporter, permease protein precursor [Oceanospirillum sp. MED92] Length = 309 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 109/300 (36%), Gaps = 27/300 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++L + +FA ++++G +GLLS G Y L GL+ L I Sbjct: 26 FLAKVLCFALFACAFNLLLGFVGLLSFGHAAFLGTGGYITGHLMINSGLTPELAILTGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 A G + G ++K G Y A+ TL ++++ I ++ TNG+ G+ R Sbjct: 86 AGAALGALFGKLAVKREGIYFAMVTLALAQLVFFIYLQAP-FTNGEDGMQGVPR------ 138 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + + MYY +L + +I + + IRDN+ Sbjct: 139 -------GEAFGLIDLSDNLTMYYFVLAIFVFGYWVINRTVHSPFGQILKAIRDNEDRAT 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + K AF +S+A +AG+ S + + VI + ++GG+ ++ Sbjct: 192 SLGYDVNRYKWIAFVISAALAALAGSTKTLVFQLASLTDVHWHMSGEVILMTLVGGVGTI 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + G +M + + +L ++ Sbjct: 252 FGPVIGAGFIVTMQNYLSG-------------GELGNYIHIIMGVVFVICVLSFRSGIVG 298 >gi|148258283|ref|YP_001242868.1| putative high-affinity branched-chain amino acid transport system permease livM [Bradyrhizobium sp. BTAi1] gi|146410456|gb|ABQ38962.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 338 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 30/304 (9%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +I +LIY + L+I+ G G SL YA+GAY+ IL +Y ++ L + Sbjct: 45 NFIIFQMTMLLIYGLAVLALNILTGGSGQFSLGQSAFYAVGAYTSAILMEQYNINYALTL 104 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI--KWKPITNGKAGIYVAD 154 PV+ ++ G + G P+L+ G YLA+AT ++ IL ++ T G G+ V Sbjct: 105 PVAGVVCFGFGFLFGQPALRLSGVYLALATFALATAMPQILKLGFFEHWTGGVQGLVVTK 164 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 G + + +YY L + + L R+ A+ IR Sbjct: 165 PDAPFGLPMSQDMW--------------LYYFTLAITIAIYIFSVNLLRSRSGRAFMAIR 210 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 DN+ A ++ + K AF VS+ G+AG A + ++PD + I + ++ Sbjct: 211 DNEIAASAMGIDVATYKTLAFGVSAGITGVAGGLGAIAVQFVAPDSYTIVLAISLFLGMV 270 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG+ L A +I V + G++ + + + LFL+I + Sbjct: 271 VGGVGWLPGSFIGAAFIIFVPNIAEGISKGLSGA--------------VFGVLLFLIIFL 316 Query: 335 RSHS 338 H Sbjct: 317 VPHG 320 >gi|107021987|ref|YP_620314.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|116688931|ref|YP_834554.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|105892176|gb|ABF75341.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia AU 1054] gi|116647020|gb|ABK07661.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia HI2424] Length = 395 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 96/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 52 VAIGIGVPLAALVAPEASAFHLSAYTMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 112 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 171 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 231 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + + L+ + + + +RD + L + + KL + Sbjct: 232 SPGTRTVLLLLTFAILVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 292 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 352 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 384 >gi|260597974|ref|YP_003210545.1| hypothetical protein CTU_21820 [Cronobacter turicensis z3032] gi|260217151|emb|CBA30971.1| hypothetical protein CTU_21820 [Cronobacter turicensis z3032] Length = 357 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 96/333 (28%), Gaps = 27/333 (8%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL- 84 L + ++ +IL Y + A L +V G GLLSL I +A+G Y+ + Sbjct: 36 LLPASHPLAVSTWTLTLMGKILCYAIVAVALDLVWGYAGLLSLGHGIFFALGGYAMGMYL 95 Query: 85 ------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 S S +++ L + A + Sbjct: 96 MRQAAGDGLPAFMSFLSWSELPWYWWGTSNFLWALLLVVLVPGLLALVFGFFAFRSKIKG 155 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +I G + + + F + I ++ L + Sbjct: 156 VYFSIITQALTFAGMLLFFRNETGFGGNNGFTGFTTLLGFSLTAAGTRIALFIATLALLL 215 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 ++ LWL R+ +RD + KL + +S+ G+AGA + Sbjct: 216 ACLAVGLWLARSKFGRVLTAVRDAESRLMFCGYDPRGFKLLVWTISAVMCGLAGALYVPQ 275 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P + +I V LGG +L ++ G L F Sbjct: 276 VGIINPGEMSPTNSIEAAIWVALGGRGTLVGPVFGALLVNGAKSL--------------F 321 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + L+ L + L Sbjct: 322 TVVMPEYWQLFLGLIFILITLFLPRGVAGLLRR 354 >gi|254427787|ref|ZP_05041494.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] gi|196193956|gb|EDX88915.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] Length = 386 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 103/353 (29%), Gaps = 35/353 (9%) Query: 11 YDKILCLLAVVYPLL--LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + +L ++ +L LF A Y ++ + L Y + A L +V G G+LSL Sbjct: 18 FMGVLFGATLLVTVLNQLFPADSALHVSAYTVTLLGKYLCYALLALALDLVWGYCGILSL 77 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +A+G Y+ + R + LP D A L+ Sbjct: 78 GHGAFFALGGYAMGMYLMRQIGDRGVYGNPELPDFMVFLNWSELPWYWQGFDQFWFAALM 137 Query: 129 MSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRF 169 + + + + + + + + + Sbjct: 138 ILLVPGLLAFVFGWLAFRSRVTGVYLSIITQALTYALMLAFFRNELGFGGNNGLTDFKDL 197 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 F + + + + W+ + + +RD + + Sbjct: 198 LGFSLQSDATRVGLLMATAVALAGAFVLCRWITGSKLGRVVLAVRDAESRARFVGYRTEH 257 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL F +S+ G+AGA + I+P F +I ++ V +GG +L Sbjct: 258 YKLWIFTLSAILAGIAGALYVPQVGIINPGEFSPLNSIELVVWVAVGGRATLYGAVIGAI 317 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + G+ + V + H L+ L Sbjct: 318 LVNYGKTVFTGI--------------MPEAWLFALGGLFVAVTVFLPHGLVGL 356 >gi|152986754|ref|YP_001350902.1| urea ABC transporter permease UrtC [Pseudomonas aeruginosa PA7] gi|150961912|gb|ABR83937.1| urea ABC transporter, permease protein UrtC [Pseudomonas aeruginosa PA7] Length = 359 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 94/319 (29%), Gaps = 13/319 (4%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 +L + L L A Y ++ +IL Y + A L +V G GLLSL + Sbjct: 24 AAFAVLLAMPLLHLLPADSALHVSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGL 83 Query: 73 AYAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 +A+G Y+ + W +P + + L L Sbjct: 84 FFALGGYAMGMYLMRQAAGDSLPAFMSFLSWNELPWYWAGTQHFLWALCLVVLVPGALAF 143 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIY 179 + + AG+ + R + FP + Sbjct: 144 VFGYFAFRSRIRGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGT 203 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 ++ + + S + L R+ +RD + KL + +S+ Sbjct: 204 RAALFLATVALLAASLLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSA 263 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 G+AGA F ++P + +I V LGG +L ++ G Sbjct: 264 VLCGLAGALFVPQVGIVNPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFT 323 Query: 300 GMNFYYFNSLLKFDCSFNM 318 Y+ L F Sbjct: 324 VAFPEYWLFFLGALFIFVT 342 >gi|86748379|ref|YP_484875.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86571407|gb|ABD05964.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 383 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 95/328 (28%), Gaps = 36/328 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + ++ + L Y A GL + G G+LSL + + +G Y + S+ Sbjct: 31 DVFRLNLVAKYLTYAFVALGLVLCWGFGGILSLGQGVFFGLGGYGMAMYLKLEASSVANT 90 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---------------------- 133 S + L TL + I Sbjct: 91 KIQSTPGIPDFMDWNQITQLPLFWQPFHSLTLTILAILIVPTLFAYLIGAAMFKRRVGGV 150 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 +I I + L + ++ +Y+V + F Sbjct: 151 YFAIITQAIAAILTILIIGQQGYTGGINGITDLRTLKGWDIRPDHAKVVLYFVEVAFLFG 210 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + L++R + + +R+ + ++ K+ AF +++ F + GA F + Sbjct: 211 CILLALFVRHSKLGRILVAMREKEDRVRFSGYSVANFKIFAFCLAAMFAAIGGAMFTLNV 270 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG S+ T ++ Sbjct: 271 GFMSPSFVGIVPSIEMVIYTAVGGRLSIFGAIYGTLLVNFAKTSLSE------------- 317 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 SF + V+L+ + L Sbjct: 318 -SFPQLWLFGLGALFIAVVLIFPNGLAG 344 >gi|320321857|gb|EFW77953.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. glycinea str. B076] gi|320331036|gb|EFW87010.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. glycinea str. race 4] gi|330872280|gb|EGH06429.1| high-affinity branched-chain amino acid ABC transporter permease BraD [Pseudomonas syringae pv. glycinea str. race 4] Length = 304 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 85/304 (27%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P Sbjct: 9 MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F S FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPMLLEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|158424417|ref|YP_001525709.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331306|dbj|BAF88791.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 659 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 123/310 (39%), Gaps = 33/310 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y+ ++G +IL++V+FA L ++ GL S + +GAY + G S Sbjct: 351 PLFLGNYMLTVGSEILVFVLFAASLHFLMTVGGLSSFGHAAYFGLGAYGAAFMVKLAGAS 410 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + V + A ++ G +++ G Y A+ TL ++I +I +W +T G G+ Sbjct: 411 MVVALLVGPFMGLAGAVLFGWFAVRLSGVYFAMLTLAFAQITWSIAFQWVEVTGGDNGML 470 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +P+S+ +++ LG+ + +++ L + R Sbjct: 471 GI------------------WPASWASSPQGFFWLTLGVVAIGVAVLRMLVFSPFGFGLR 512 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 RD+ ++ + +AF V+ F G+AGA F + + P+ ++ + Sbjct: 513 AARDSALRSEAIGIDRKNVQWAAFVVAGTFAGVAGALFGFLKGSVFPENLAIPTSVDGLV 572 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V+LGG+ ++S + + S ++ + L+ Sbjct: 573 MVLLGGIETVSGAVVGAIVYKALAIWL---------------MSKTELSKLVLGGVIVLL 617 Query: 332 ILMRSHSLLR 341 ++ ++ Sbjct: 618 VVAFPKGIVG 627 Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 92/307 (29%), Gaps = 28/307 (9%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIP 97 + + A GLSI+ G +++ Y +GAY L W I Sbjct: 35 LTGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYIAFTLTEALSGTLGFWGGIV 94 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++A+I G + + L+ + L+ + ++ + G Sbjct: 95 LAALIVAVLGAALEIVLLRRIYRAPELFQLLATFGVTLMVQDIVILIWGP---------- 144 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 R+ + + ++ + + L RT R ++ Sbjct: 145 EDLMGRRAPGFRGAVDIMGQMVPAYDLLLIGLGPAVLGVLWLIFHRTRWGVLVRAATQDR 204 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +L + S FA+ G+ GA + ++ V+ ++ Sbjct: 205 DMVAALGVNQKWLFTSVFALGVFLAGLGGALQIPRDAVSHAMDLRVIVDVFVVVVIGG-- 262 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S++ A ++ + + F L+ I + +V+++R + Sbjct: 263 LGSVTGAFVAAILVSELNAFGILI--------------FPKISLVLVFIVMAVVLVIRPY 308 Query: 338 SLLRLRT 344 L Sbjct: 309 GLFGKAE 315 >gi|238026427|ref|YP_002910658.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia glumae BGR1] gi|237875621|gb|ACR27954.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 392 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 103/347 (29%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++ + + Y + A L +V G G+LSL + Sbjct: 49 LAIGVGVPLAALVAPETSAFHLSAYAMTIAGKFMCYAIGALALDLVWGYCGILSLGHGLF 108 Query: 74 YAIGAYSYVILGSRYGLS----------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +A+G Y+ + R + + ++ G +L A Sbjct: 109 FALGGYAIGMYLMREIGHDGVYGSSLPDFMVFLNWKSLPWYWHGSDHLAVALALVVLAPA 168 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSS 175 + + +K ++ + A L F R F + Sbjct: 169 VVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFGIT 228 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 229 SPGTRTVLLLLTFATLVLAFVAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 288 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 289 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPILGAFAVNGAK 348 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 349 SFFTAY--------------FAEYWLFFLGLIFVLVPLLMPRGIVGL 381 >gi|260568302|ref|ZP_05838771.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|260154967|gb|EEW90048.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str. 40] Length = 519 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 102/251 (40%), Gaps = 25/251 (9%) Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 W + + A I+ GM++ P + +G + ++A++ E+F+ + + + +T G G+ Sbjct: 5 PWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLALHFGWLTGGATGLM 64 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + +L ++ R ++ GM ++ +I +RR+ + Sbjct: 65 IQLKLGWVWIVFRERW--------------PSLLIVFGMLLVTLAITWAVRRSRLGFYLV 110 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVI 270 R+ + A + + +L A A+SSA M G F A I P MF + +I + Sbjct: 111 ATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIEPAAMFSLAFSIQIA 170 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++GG+ +++ +L+ + E L F + + L L Sbjct: 171 MFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF----------VYGLVLIL 220 Query: 331 VILMRSHSLLR 341 V+L + ++ Sbjct: 221 VVLFMPNGIMG 231 >gi|229172655|ref|ZP_04300213.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus MM3] gi|228610787|gb|EEK68051.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus MM3] Length = 333 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 60/334 (17%), Positives = 131/334 (39%), Gaps = 31/334 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V+ L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VFMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + + I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDLFRDRF-------------------NFYYVTLICLIVIFIL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVATISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATAYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R T ++ + +V+L+ L+ +++ Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTIKRLKNVKQ 320 >gi|152970169|ref|YP_001335278.1| high-affinity branched-chain amino acid ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955018|gb|ABR77048.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 524 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109 I G LG++++ IGAYS ++ + +PV+ +++ GM Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + ++ L I ++ + + + + ++ Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + +VLL +CF + RT + R + N+ Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + AF + S G+ G + + I +V+LGG+ L+ A Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ L+++ + L I R L L+ Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521 >gi|115525057|ref|YP_781968.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115519004|gb|ABJ06988.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 322 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 109/287 (37%), Gaps = 15/287 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + + ++ + + Y + Q L + + A ++++G GLLS + Sbjct: 20 MIAFAIMTLALMVVPFTGVYPFFVM-QGLCFALLACAFNLLIGYGGLLSFGHAMFLGTAG 78 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y +GL L I + +G G++ GL +++ +G Y A+ TL +S++ I + Sbjct: 79 YVTAHGLKVWGLPPELGILAGTLAAGGLGIVTGLIAIRRQGIYFAMITLALSQLLYFIYL 138 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + ++ + + F + +YYV+L +I Sbjct: 139 QA--------------PFTHGEDGIQGIPQGHLFGFINLANSTTLYYVILAGFLFGFLVI 184 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + IR+N+ SL KL AF +S+ G AG+ S Sbjct: 185 YRAINSPFGEVLKAIRENEPRAISLGYKTEQYKLMAFILSATLAGFAGSLKVFVAQNASL 244 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 ++ + ++ + ++GG+ ++ ++I + + G + Sbjct: 245 TDVHWTMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGFGQWV 291 >gi|290509620|ref|ZP_06548991.1| branched-chain amino acid transport system permease [Klebsiella sp. 1_1_55] gi|289779014|gb|EFD87011.1| branched-chain amino acid transport system permease [Klebsiella sp. 1_1_55] Length = 524 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109 I G LG++++ IGAYS ++ + +PV+ +++ GM Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + ++ L I ++ + + + + ++ Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + +VLL +CF + RT + R + N+ Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + AF + S G+ G + + I +V+LGG+ L+ A Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ L+++ + L I R L L+ Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521 >gi|22537721|ref|NP_688572.1| branched-chain amino acid ABC transporter permease [Streptococcus agalactiae 2603V/R] gi|76786749|ref|YP_330201.1| hydrophobic amino acid uptake ABC transporter permease LivH [Streptococcus agalactiae A909] gi|22534610|gb|AAN00445.1|AE014263_24 branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76561806|gb|ABA44390.1| hydrophobic amino acid uptake (HAAT) family ABC transporter, permease protein LivH [Streptococcus agalactiae A909] Length = 289 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 103/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y +GA+ L + L+ +L + + Sbjct: 5 LVNGLILGSIYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLI 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + S G+++ + + IA LI + +L G Sbjct: 65 AMLGSAFLGVVIEYLAYRPLRKSTRIAALITAIGVSFLLEYGMVYLVGAD---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I ++ + +L L ++ +++T + A R + + Sbjct: 115 -TRAFPQAIHTVKYNLGPITITNVQLIILGIALLLMLTLQFIVQKTKMGKAMRALSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L + + ++ L L+ L+R Sbjct: 233 GIIPGAAIGGFVIGILETLATALG-------------VSDFRDGIVYAILILIFLIRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|241763043|ref|ZP_04761104.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241367826|gb|EER62058.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 327 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 119/328 (36%), Gaps = 34/328 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L+ + + + + I I+ + A + + G G+LS+ +IGA Sbjct: 12 VLVLLALVIAGTLLSWGRPFWLDNSVMIGIFALMALSVGLCYGQAGILSMATAAFASIGA 71 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + IL +RYG S WL +P + ++ + + L+IAT ++S +F+ + Sbjct: 72 FGSAILSTRYGFSPWLGLPFAMIVPMLVAYPLARALTRLSPLPLSIATFLLSGLFEIAIR 131 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + T G G+ L + + +++ G + ++ Sbjct: 132 EGGDFTGGYIGLSGIPPLPLVKGVQQMH------------------FLVWGGVLVVVALY 173 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + A T R + + + + FA S+A G+AG +A + P Sbjct: 174 ANLMGSTYGLAINTARHDPLRATADGVGVPHLLANTFAASAALAGLAGWLYAHHMSYMGP 233 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 D +I V+ + ++GG +L A L+ V Sbjct: 234 DSLTTQVSISVLLMAVVGGAGTLLGPVAGAAALMLVTLYL----------------PATE 277 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPS 346 H + L +V+++ LL R S Sbjct: 278 SHGMVYGGILLVVLMLAPGGLLGTRWRS 305 >gi|222111252|ref|YP_002553516.1| inner-membrane translocator [Acidovorax ebreus TPSY] gi|221730696|gb|ACM33516.1| inner-membrane translocator [Acidovorax ebreus TPSY] Length = 355 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 115/309 (37%), Gaps = 7/309 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ LL + ++ ++L++V+ +++G G++S + + Sbjct: 15 VLAVLLMACLLGLAVAPFAFAGVKALNVAAKVLVFVVLVASFDLLLGYTGIVSFAHTMFF 74 Query: 75 AIGAYSYVILGSR---YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IGAY I SR ++ + + + ++S + +GL SL+ R + A+ TL ++ Sbjct: 75 GIGAYGIAIATSRLGATWGALAVGLGCALLLSLLLALAIGLFSLRVRAIFFAMITLAVAA 134 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 FQ + + T G+ G+ + + + YY+L Sbjct: 135 AFQTLASQLSDWTGGEDGLTFKLPEWLSPSFEPFEEEVLGVLIDG---RLITYYLLFVTA 191 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + +L + + + IR+N+ ++ ++ + + +S+ F AGA A Sbjct: 192 VVLVLALLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTLSSVLSALFACAAGAMLAL 251 Query: 252 SRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 F + + IV++GGM ++ + + + + + Sbjct: 252 WLRYNGPDTSLSFEIMMDCLLIVVIGGMGTIYGAVVGSVLFVVAQSYLQDLLGVAHEAAS 311 Query: 311 KFDCSFNMR 319 + Sbjct: 312 GLPWLAALL 320 >gi|206577028|ref|YP_002238597.1| urea ABC transporter, permease protein UrtB [Klebsiella pneumoniae 342] gi|206566086|gb|ACI07862.1| urea ABC transporter, permease protein UrtB [Klebsiella pneumoniae 342] Length = 524 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109 I G LG++++ IGAYS ++ + +PV+ +++ GM Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + ++ L I ++ + + + + ++ Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + +VLL +CF + RT + R + N+ Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + AF + S G+ G + + I +V+LGG+ L+ A Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ L+++ + L I R L L+ Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521 >gi|148658197|ref|YP_001278402.1| inner-membrane translocator [Roseiflexus sp. RS-1] gi|148570307|gb|ABQ92452.1| inner-membrane translocator [Roseiflexus sp. RS-1] Length = 361 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 118/314 (37%), Gaps = 27/314 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 ++I + I+I I ++A ++ G GLLS + +A+GAY I +GL++W Sbjct: 48 SRFIQGLAIEIFILALYALSYDLIFGFTGLLSFGHSMFFAVGAYLTGIALKSFGLNLWQT 107 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 V + + A ++ G+ + +G A+ TL +S +F +++ + Sbjct: 108 FGVLMLAALAQALLFGIVLPRVKGITFALVTLGLSSVFHIVVMS-------------REL 154 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + G V S + +Y+V L + + I + + + IR+ Sbjct: 155 GDYTGADVGLQGVIIPDFISPATERLRLYFVTLTILVVFYLIYRRFVDSPLGRVCKAIRE 214 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ L KL+A +SS +AGA + +SPD+ + + ++++ Sbjct: 215 NEGRAQMLGYNTFLFKLAALILSSLTAAIAGALHTIYQPIVSPDIAGLGFTVTALLMILI 274 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ +L AI + + + L++L Sbjct: 275 GGVGTLHGALAGAAIFRLLDFGLRRY--------------LGESASFVNGAIYVLIVLFL 320 Query: 336 SHSLLRLRTPSNFL 349 + ++ L Sbjct: 321 PYGIVGTWQLKASL 334 >gi|171911821|ref|ZP_02927291.1| inner-membrane translocator [Verrucomicrobium spinosum DSM 4136] Length = 388 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 41/353 (11%), Positives = 94/353 (26%), Gaps = 32/353 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + I A++ ++L L + + + L Y + A + ++ G GLLS Sbjct: 6 QRRESIIFFAFALLLVVILPLASSIGWISPFTLNTWGKYLSYAILAIAVDLLWGYTGLLS 65 Query: 68 LNCVIAYA----------------IGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMI 109 L + ++ +G Y + G + I ++ Sbjct: 66 LGQALFFSLGGYMMGMYLMLMIGKLGQYKSDLPDFLVFLGHTQLPAIWKPFYSFPFALLM 125 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + + + +A + ++ + D Sbjct: 126 VVVIPGILAFIFGYLAFRSRIKGVYFSILTQALTYGAALMFFRNDLNMGGNNGFTDFRFI 185 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + ++ V + + WL T R +RD++ Sbjct: 186 LGADIRSDGTKRTLFIVTAIVLLGVYAGCRWLTTTKFGLIQRAVRDSENRVLFSGYAAAN 245 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL F + + + G+ F I+P +++ + V +GG +L Sbjct: 246 YKLFVFVLCAIIASLGGSLFVTQVGIINPSEMTTQKSLEAVVWVAVGGRGTLIGPILGAI 305 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + L +L L+ L Sbjct: 306 GVNSLQSWATR--------------AMPDYWLLFLGAGFTLAVLFMPKGLVGL 344 >gi|72161586|ref|YP_289243.1| branched-chain amino acid ABC-type transport system permease [Thermobifida fusca YX] gi|71915318|gb|AAZ55220.1| branched-chain amino acid ABC-type transport system permease components [Thermobifida fusca YX] Length = 481 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 98/320 (30%), Gaps = 32/320 (10%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + LI + A GLS++ G+ L + GA +++ + + + Sbjct: 175 LLYGLIIAISAVGLSLIFGTTKLTNFAHGDMVTFGALMALLVSGMTLFAGLHTAVTNLLA 234 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLI-----------MSEIFQNILIKWKPITNGKAGIY 151 + + +A L+ + + + + G+ Sbjct: 235 DVWLLGPVLGFVTRPMVLGTVVAVLLGAALGAFLERFIWRPLRKRNVALIQMFIVSIGLA 294 Query: 152 VADRLYFLGTTVRSLIRFFRFPS------SFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 + R + + + + F + +++ + + L+ T Sbjct: 295 MVLRHVLMVAFGSNRMSYPDFQLQAMLRLGPIAITPRDLVLMILSVLVLVGVAALLQFTR 354 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + A R + DN+ S + L + + A + G F+ ++I F Sbjct: 355 VGKAMRAVSDNRDLAESSGINVDRVTLYVWTLGGALTALGGVFYG--LNQIVHWQMGFHL 412 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 +++ + VILGG+ + I+ V +L + Sbjct: 413 LLLMFAAVILGGLGTAYGAMVGGLIIGLVAQLSTLWFPSQLMNAWALG------------ 460 Query: 326 IALFLVILMRSHSLLRLRTP 345 + +++L+R +L R Sbjct: 461 -LMIIMLLVRPQGILGRRER 479 >gi|15600053|ref|NP_253547.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|218893955|ref|YP_002442824.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|9951132|gb|AAG08245.1|AE004899_6 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|218774183|emb|CAW30000.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 359 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 89/304 (29%), Gaps = 13/304 (4%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS- 86 A Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 39 PADSALHLSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMR 98 Query: 87 ---------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 W +P + + L L A + + Sbjct: 99 QASGDSLPAFMTFLSWNELPWYWAGTQHFLWALCLVVLVPGALAFAFGYFAFRSRIRGVY 158 Query: 138 IKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 AG+ + R + FP + ++ + + S Sbjct: 159 FSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGTRAALFLATVALLAAS 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L R+ +RD + KL + +S+ G+AGA F Sbjct: 219 LLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQVG 278 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I+P + +I V LGG +L ++ G Y+ L Sbjct: 279 IINPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFLGALF 338 Query: 315 SFNM 318 Sbjct: 339 IVVT 342 >gi|254244195|ref|ZP_04937517.1| hypothetical protein PA2G_05040 [Pseudomonas aeruginosa 2192] gi|126197573|gb|EAZ61636.1| hypothetical protein PA2G_05040 [Pseudomonas aeruginosa 2192] Length = 304 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 87/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G ++L Y I AY I + P+ Sbjct: 9 MINGLTLGSVYGLIAIGYTMVYGIIGRINLAHGEVYMISAYLSAIALALLAFFGLQNFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLLFTVLVTCTYGWVIERIAYKPLRNSTRLAPLISAIGMSLILQNYVQVAQGPRQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F FV ++L+ A + +R T + R + ++K Sbjct: 129 GIPTLLDGALKFHVGDGFVQLTYTKLFILIASLIGMAVLTYVIRYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L GM + + F L L+++ R Sbjct: 248 GSLPGAMLGGLVLGVAEAQFSGMVNTDYKDVFAFS-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|116053009|ref|YP_793327.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|296391694|ref|ZP_06881169.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1] gi|115588230|gb|ABJ14245.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 359 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 89/304 (29%), Gaps = 13/304 (4%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS- 86 A Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 39 PADSALHLSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMR 98 Query: 87 ---------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 W +P + + L L A + + Sbjct: 99 QASGDSLPAFMTFLSWNELPWYWAGTQHFLWALCLVVLVPGALAFAFGYFAFRSRIRGVY 158 Query: 138 IKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 AG+ + R + FP + ++ + + S Sbjct: 159 FSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGTRAALFLATVALLAAS 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L R+ +RD + KL + +S+ G+AGA F Sbjct: 219 LLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQVG 278 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I+P + +I V LGG +L ++ G Y+ L Sbjct: 279 IINPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFLGALF 338 Query: 315 SFNM 318 Sbjct: 339 IVVT 342 >gi|302561200|ref|ZP_07313542.1| ABC transporter [Streptomyces griseoflavus Tu4000] gi|302478818|gb|EFL41911.1| ABC transporter [Streptomyces griseoflavus Tu4000] Length = 310 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 100/308 (32%), Gaps = 13/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---SYVILGSRYGLSIWLL 95 + + + +Y + A G ++V G + L++ + +GA+ + + G SIW+ Sbjct: 8 LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMVGAFGALTVHLYILPDGTSIWVA 67 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P+ + + +++ + + +F L A + LI ++ A Sbjct: 68 LPLMLLGAVIVSVLVAIGAERFAYRPLRGAPRLAP------LITAIGLSLALQQAVWAFY 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 I F + ++L+ + ++ RT + Sbjct: 122 PEAKSKLPFPQIEGGPFSIGGATIQTGDIFLLVAAPISMGFLAYFVMRTRTGRGMQATAQ 181 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + AFA+ + F + G +I M F + + +L Sbjct: 182 DPDTAKLMGVNTDRIIVIAFALGAVFAAVGGVASGLKYGQIDFKM-GFILGLKAFTAAVL 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ +L L S+ +++I + L R Sbjct: 241 GGIGNIYGAMIGGVVLGVAETLATAYIADIPGLDKFGSQSWADVWAFILLILVLLF---R 297 Query: 336 SHSLLRLR 343 LL R Sbjct: 298 PQGLLGER 305 >gi|29832765|ref|NP_827399.1| branched-chain amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29609885|dbj|BAC73934.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 310 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 100/308 (32%), Gaps = 13/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA---IGAYSYVILGSRYGLSIWLL 95 + + +Y + A G ++V G + L++ + GA + G S+W+ Sbjct: 8 LANGLFLGSMYGLIAIGYTMVYGIVQLINFAHGEIFMTGGFGALTVYFYVLPDGTSMWIA 67 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P + G +++ + + +F L A + LI ++ G + Sbjct: 68 LPAMLIGGGLIAVLIAVGAERFAYRPLRGAPRLAP------LITAIGLSLGLQQVVFNFY 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + F V + ++++ A++ ++R + A + Sbjct: 122 PDAKTDRTFPQLGTESFNIGSVHIQSGQLFIIIAAPICMAALGFFVRLSRTGRAMQATAQ 181 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + AFA+ F +A + +I F + + +L Sbjct: 182 DPDTAQLMGIDTNRIIVIAFAIGGLFAAVAAVAYGLRYGQI-KYDMGFQMGLKAFTAAVL 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ +L L S+ +++I + L+ R Sbjct: 241 GGIGNIYGAMLGGVVLGVAETLATAYIDGIPGMQQLGGGSWAPVWAFVLLILVLLL---R 297 Query: 336 SHSLLRLR 343 LL R Sbjct: 298 PQGLLGER 305 >gi|121613045|ref|YP_001000696.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005617|ref|ZP_02271375.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87249168|gb|EAQ72129.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 298 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 93/303 (30%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GAY+ + + + + + Sbjct: 10 LVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+ + K I+ LI + L I Sbjct: 70 AMIFAACVGIATDRIAYKPLRQAPRISLLITAIGISFFLQNLFNILFTSTPRTFTPP--- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 VI V + +++ L ++ A R + + + Sbjct: 127 -------SYFEESVNFGGVITTYGSLMVPALTFVILIAVLWILYKSKYGIAIRALAFDIQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ SA + G F+AA+ + P M + + +LGG+ Sbjct: 180 TVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLI-GLKAFAAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + F + I L ++L R Sbjct: 239 GSVVGAVLGGLIIGFTEVVV-----------VAFFPDLSGFKDAFAFIFLVFILLFRPTG 287 Query: 339 LLR 341 +L Sbjct: 288 ILG 290 >gi|330006533|ref|ZP_08305632.1| urea ABC transporter, permease protein UrtB [Klebsiella sp. MS 92-3] gi|328535810|gb|EGF62245.1| urea ABC transporter, permease protein UrtB [Klebsiella sp. MS 92-3] Length = 524 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109 I G LG++++ IGAYS ++ + +P++ +++ GM Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPMAFLVTAGIGMA 310 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + ++ L I ++ + + + + ++ Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + +VLL +CF + RT + R + N+ Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + AF + S G+ G + + I +V+LGG+ L+ A Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ L+++ + L I R L L+ Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521 >gi|76800740|ref|YP_325748.1| branched-chain/neutral amino acids ABC transporter permease [Natronomonas pharaonis DSM 2160] gi|76556605|emb|CAI48176.1| ABC-type transport system permease protein II (probable substrates branched-chain/neutral amino acids) 5 [Natronomonas pharaonis DSM 2160] Length = 378 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 105/293 (35%), Gaps = 8/293 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + +LL + L + + A G+++++ L+S + Sbjct: 22 LLYIGIAVAVLLAVPDIEQFHADLRMQTIYLGLCWGLAALGVNLLLRHTELVSFGHAAYF 81 Query: 75 AIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 GAY ++ LL+ +++ + +++G + Y A+ TL +++ Sbjct: 82 GGGAYGAALVAQYAGIEEAVLLVLAGVLVAISLAVVIGWLVAGYLDIYFALLTLAFNQLL 141 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 I++ + G+ V + F + YE+ +YYV + + + Sbjct: 142 FAIVMGSPRLLGSDDGLSVRPASE------LTRPTLFGVEFTAAQYEVLIYYVAIAVLIV 195 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + L + A I ++ + + F +S+ + G+AG ++ S Sbjct: 196 MLLVTWRLINSPFGRALDAIGQDRTRARFIGIPVKRYVWVTFVISAVYGGLAGGLYSLSM 255 Query: 254 DRISPDMFKFSEN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 + P F ++ + ILGG +L +L ++ Y+ Sbjct: 256 LHVRPGNTLFVLRSGEILFMAILGGFKTLLGPIAGGIVLTYMLTELRFATEYW 308 >gi|182435321|ref|YP_001823040.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463837|dbj|BAG18357.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 663 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 115/322 (35%), Gaps = 14/322 (4%) Query: 2 SIFSLRLNKYDKILCL--LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIV 59 S R+ + A + LL+ L Y S+ L + A ++I+ Sbjct: 314 SRVPSRIGRLPGGAAWWRAAPLLVLLVVLISLPALLDAYSISLAGSALALGLLAVSVTIL 373 Query: 60 VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G GL +L +A+GAY+ L + + +SA+ + ++G ++ RG Sbjct: 374 TGYAGLPTLGQTAPFAVGAYATANLAEAGWTVGPVQLALSALAAAVFAAVVGPAVIRARG 433 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 + + TL + E+ ++ + K +T G G+ L + ++ Sbjct: 434 TTVLMITLAVGELTGAVVNQLKSVTGGADGLVGFPATRAL------------WGGEEMLE 481 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 E +Y L + ++ S+ L + R+ R + + + L A + Sbjct: 482 ESELYTYALVVAVVAVSVTLLVLRSPAGKLLTGTRGAEARMRASGHPVGRYLLVAHICAG 541 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A G+ G+ + ++P F + V++GG TS+ +++ + Sbjct: 542 ALAGVGGSLMVTVQQYLAPADVGFEIAAFALLAVVIGGTTSVIGALLGAGLIVATRDWVA 601 Query: 300 GMNFYYFNSLLKFDCSFNMRHT 321 G + LL + Sbjct: 602 GSWPGHGPLLLGVLFVATVYLL 623 Score = 40.6 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 77/272 (28%), Gaps = 13/272 (4%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 L+ + A GLS+ G+ G+L+L+ YAIGAY+ L + L + + Sbjct: 19 LLLFVVAAGLSLAFGTAGVLNLSHGTLYAIGAYTGAELSDGTWGGLALGLAAGTAAACLA 78 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 G + + L+ + + + Sbjct: 79 GAGLSAATAPLARRGHLAQALLTFGLALIGGDLLIQVFGADELPVRVPEALDSSVMLLGH 138 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 Y + ++ L+A L RT + A R D+ + + Sbjct: 139 R-----------YPAYRLCFIVMAVLLAAFGTWVLTRTRMGAAVRAAADDPQMLAATGRN 187 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 A + A G AG A +V+ ++ + SL Sbjct: 188 PRAVHTGVLAAAGALAGAAGVLGAPIIGPGPGTSENVLMLSLVVVVLGG--LRSLWATFF 245 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 A + V L + LL + + Sbjct: 246 AAIAVGEVQTLGVALAPDLAPYLLFAAMAAVL 277 >gi|317404404|gb|EFV84822.1| hypothetical protein HMPREF0005_02556 [Achromobacter xylosoxidans C54] Length = 322 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 118/308 (38%), Gaps = 4/308 (1%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 K L LA + L L + + ++ ++ + LIY + A L +++G ++S Sbjct: 3 RKTLVNLAGLALFALVPALASATGEAFLVNLMTRFLIYAIAAVSLDLILGYGAMVSFGHA 62 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + +G Y I G + L + + ++M ++ + + Sbjct: 63 AFFGLGGYVIGIAGYHFAQGDTLFGWSGSQAA----LVMWPLAVACAALAGLVVGFLSLR 118 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 I + + + G S+ P + + YYV L + Sbjct: 119 TAGVQFIMITLAFGQMLYFILVGLVVYGGDDGLSIDARNTLPGLDLNGPVTFYYVCLALL 178 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + + + A +++R N + L + +L+AF +S+A G+AGA +A Sbjct: 179 AAWVFLCRRIVNSPFGMALQSLRQNPRRSTGLGLAPLRYRLTAFVLSAAGAGLAGALWAN 238 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 +SPDM + ++ ++++VILGGM S+ A+ +G+ +L ++ L Sbjct: 239 YALFVSPDMAGWQKSGELMAMVILGGMGSIFGPVLGVAVYLGLEQLATAWTEHWMLILGP 298 Query: 312 FDCSFNMR 319 + Sbjct: 299 VLVLVVLF 306 >gi|260425300|ref|ZP_05779280.1| urea ABC transporter, permease protein UrtC [Citreicella sp. SE45] gi|260423240|gb|EEX16490.1| urea ABC transporter, permease protein UrtC [Citreicella sp. SE45] Length = 381 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 102/352 (28%), Gaps = 42/352 (11%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 +++ L L + + + L+Y M +++ G G+L+L + + +GAY Sbjct: 16 ALFIVIVLGLPLMMDDVFWLNRIAKYLVYGMLGIAIALSWGYAGILNLGQGLFFGLGAYM 75 Query: 81 YVI--------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 + + + GA + + + M Sbjct: 76 VAMSLKLQSYTSMQQGSDRPVPDFMLWNAEPGAPTELCCIVKGSWLWLPFQAQWFGMVMA 135 Query: 133 F----------------------QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 +I + + I A + + L Sbjct: 136 IAVPVIVALILSSAIFRLRVSGVYVAIITLALVLLVRLLIIDAQPVTNGFNGLTDLGWLT 195 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 F Y + YY++ + WL T ++ RD+ L + Sbjct: 196 VAGIEFDPYMVSTYYIVAVSTCAVLLLTRWLVSTRAGLILQSTRDDPNRARYLGYDVAAY 255 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 ++ F VS+ G AG + + + SP + +I ++ +GG +SL A + Sbjct: 256 QVFFFTVSAGIAGFAGMLYVIAAEFASPSFLDITFSISMVVWAAVGGRSSLIGAAIGAIL 315 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + F ++ + LV+L L L Sbjct: 316 INTIEATASE------------TEMFQEAWKLIIGVIFVLVVLYMPRGLAGL 355 >gi|83594637|ref|YP_428389.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] gi|83577551|gb|ABC24102.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] Length = 314 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/331 (16%), Positives = 121/331 (36%), Gaps = 36/331 (10%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +L LA+ L++ F +++L + +FA ++++G +GLLS Sbjct: 5 RSLLPWLALGLALIVAPFFVYPV-------FLMKVLCFALFACAFNLLLGYVGLLSFGHA 57 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + AY + L + + + +G G+ G +++ +G Y A+ TL +++ Sbjct: 58 AFFGFAAYVSAHALKVWELGPLQAVALGTLTAGVLGLGFGWLAIRRQGIYFAMVTLALAQ 117 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + + ++ V F V R +Y+++L + Sbjct: 118 MIYFLCLQAAFTHGEDGIQAVPRPPVFGLIDVSDPGR--------------LYWLVLALT 163 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L +I + IR+N+ SL + KL AF +S+A G AGA Sbjct: 164 VLGFLVIARAIHSPFGQVLTAIRENEPRAISLGYDVDRYKLVAFVLSAALAGFAGAIKVM 223 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 S + + V+ + ++GG+ +L+ A+++G+ + Sbjct: 224 VFQLASLTDVHWHMSGEVVLMTLIGGVGTLAGPLVGAAVVVGIQNVFASF---------- 273 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 T + + +L+ ++ Sbjct: 274 -----GAWVTIIQGVIFVACVLLFRRGIMGE 299 >gi|149182627|ref|ZP_01861096.1| branched-chain amino acid ABC transporter, permease protein [Bacillus sp. SG-1] gi|148849650|gb|EDL63831.1| branched-chain amino acid ABC transporter, permease protein [Bacillus sp. SG-1] Length = 335 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 122/325 (37%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L L + + + + +Q+ I +FA +++G G++S + + IGAYS Sbjct: 14 LIIAFLLAVLPFMVTGRSLLFLMMQVFILGIFAMSYDLLLGYTGIVSFGHTMFFGIGAYS 73 Query: 81 YVILGS---RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 ++ + L++ L I ++ +++G I+G+ +L+ + + A+ TL ++ +F Sbjct: 74 TAVMFNKQEPTMLTLLLGILIAVVVAGIVSFIVGVLTLRLKSHFYAMLTLALAGLFLVAA 133 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T G G + + +Y L + L Sbjct: 134 EKWRSVTGGADGFTFSVP-------------------DALKDRTTLYLTCLAVMVLVFFG 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + IR+N+ SL ++ K+ VS ++G + + + Sbjct: 175 LKRFTESPLGRVLLAIRENEGRTESLGYKVLHYKVIVSVVSGVVASISGVLYMLTLRFVD 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + I+GG+ +L A++ G++ ++ Sbjct: 235 TSVFATEVTLDALLMTIIGGVGTLIGPIIGAALVEFAHHWLSGLSDVHW---------IF 285 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R L L ++ + Sbjct: 286 ERWIILFGTVYILAVIFFPKGIAGT 310 >gi|110668856|ref|YP_658667.1| ABC-type branched-chain amino acid transport system, permease protein II [Haloquadratum walsbyi DSM 16790] gi|109626603|emb|CAJ53067.1| ABC-type branched-chain amino acid transport system, permease protein II [Haloquadratum walsbyi DSM 16790] Length = 477 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 71/397 (17%), Positives = 133/397 (33%), Gaps = 62/397 (15%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ-ILIYVMFAWGLSIVVGSLGLLSLNCV 71 L + Y L+ + + Q ++ I ++ M A L++ G GL ++ V Sbjct: 24 ATLAATYLAYVLIGIGLGYSLRGQLNTIAVLTFYIGVFAMLALALNLHWGYTGLFNIGIV 83 Query: 72 IAYAIGAYSYVILGSRYGL------------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119 A+G Y ++ + + I + + G+++ LP+L+ R Sbjct: 84 GFMAVGIYVMALVSKPVYQAGGASQVGGLGLPVIIGIIAGMIAASLLGLLIALPALRLRA 143 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIY------------VADRLYFLGTTVRSLI 167 DYLAI T+ MSEI + + + AG D L + Sbjct: 144 DYLAIVTIAMSEIVRFSFLSGQLQQFNLAGRRVGFGGGSGLILDYTDPLESFFSFFGLWD 203 Query: 168 RFFRFPSSFVIY----------EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + +F I + VLL L ++ + + IR+++ Sbjct: 204 AYLGLIETFGIIIPNNPKPVVDGLVYGVVLLSFVGLYFWLLKRTGESPFGRVLKAIREDE 263 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +A SL K+ AF + A +G+AG + ++P+ F+ V +I+GG Sbjct: 264 EAASSLGKDTNGFKIKAFMLGCALMGLAGILWFMRSGAVTPNTFRPRITFFVWIALIIGG 323 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN-------------------- 317 S + AI ++ +++L S + Sbjct: 324 AGSNTGSVLGGAIFAALLYQGPRYLKNLLDTVLPSASSPSSFGPAIAPLISNLDITPLLF 383 Query: 318 -------MRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 M + L ++ R LL RT + Sbjct: 384 YTIDNIRQLQLVFMGVVLIWLMHNRPEGLLGHRTETA 420 >gi|25011671|ref|NP_736066.1| hypothetical protein gbs1631 [Streptococcus agalactiae NEM316] gi|24413211|emb|CAD47290.1| unknown [Streptococcus agalactiae NEM316] Length = 289 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 102/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y +GA+ L + L+ +L + + Sbjct: 5 LINGLILGSIYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLI 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + S G ++ + + IA LI + +L G Sbjct: 65 AMLGSAFLGAVIEYLAYRPLRKSTRIAALITAIGVSFLLEYGMVYLVGAD---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I ++ + +L L ++ +++T + A R + + Sbjct: 115 -TRAFPQAIHTVKYNLGPITITNVQLIILGIALLLMLTLQFIVQKTKMGKAMRALSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L + + ++ L L+ L+R Sbjct: 233 GIIPGAAIGGFVIGILETLATALG-------------VSDFRDGIVYAILILIFLIRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|90422881|ref|YP_531251.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90104895|gb|ABD86932.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 358 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 117/347 (33%), Gaps = 13/347 (3%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + ++ + ++ +I I+ +++G G +S + Y Sbjct: 13 LLSVLLIAIVAGLALAPLLFPGAKPLNVATKICIFAALVASYDLLLGYTGTVSFAHTMFY 72 Query: 75 AIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IG+Y+ I +I L + V ++ + +GL SL+ + A+ TL ++ Sbjct: 73 GIGSYAIAIALYTLGPSWSAIALGLAVGLPLAALLALAIGLFSLRVEAIFFAMITLAVAS 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F + + +T G+ G TV F + YY++ C Sbjct: 133 AFMVLASQLSWLTGGEDGRSFQLPELLRPGTVFIAKDVLGFAVNGRTLT---YYIIFVGC 189 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 +L + + + +R+N+ +L +F A +++ AGA A Sbjct: 190 AAMILGLLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANCIAALVAASAGALNAM 249 Query: 252 SRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 PD F+ + ++ +V++GGM ++ I I + N+ Sbjct: 250 WLRYAGPDTSLSFAIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGLASNAAA 309 Query: 311 KFDCSF------NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + R + + + ++ ++ R Sbjct: 310 EAGLPLLPGLLHPDRWLLWLGLLFIASVYFFPTGIVGRLRETSRSRR 356 >gi|312958683|ref|ZP_07773203.1| permease of ABC branched chain amino acid transporter [Pseudomonas fluorescens WH6] gi|311287226|gb|EFQ65787.1| permease of ABC branched chain amino acid transporter [Pseudomonas fluorescens WH6] Length = 304 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 88/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQGAKQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + S FV ++L+ A + ++ T + R + ++K Sbjct: 129 GIPPLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L ++++ R Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVVILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|296102370|ref|YP_003612516.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056829|gb|ADF61567.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 357 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 103/342 (30%), Gaps = 27/342 (7%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ L ++ + ++ ++ +IL Y + A L +V G G+LSL I Sbjct: 24 LVACLLILPFFAMLPATHPLALSTWMLTLLGKILCYAIVAVALDLVWGYAGMLSLGHGIF 83 Query: 74 YAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +A+G Y+ + W +P + + L + L Sbjct: 84 FALGGYAMGMYLMREAAGDGLPAFMSFLSWSELPWFWWGTQHFAWTLVLIVMVPGLLALV 143 Query: 124 IATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 + ++ G + + + F + Sbjct: 144 FGWFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFSITATTTR 203 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 I ++ + + L+ I + L R+ +RD + KL + +S+ Sbjct: 204 IALFLATVMLLLLTLGIGIALARSKFGRILTAVRDAENRLTFCGYDPKGFKLLVWTLSAM 263 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA + I+P + +I V LGG +L A++ G Sbjct: 264 LCGLAGALYVPQVGIINPGEMSPTNSIEAAIWVALGGRGTLVGPVIGAALVNGAKSF--- 320 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + + + V L + L Sbjct: 321 -----------FTVAMPVYWQLFLGLIFIAVTLFLPRGVYGL 351 >gi|119025462|ref|YP_909307.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium adolescentis ATCC 15703] gi|118765046|dbj|BAF39225.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium adolescentis ATCC 15703] Length = 322 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 105/304 (34%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G + L++ +G+Y ++ + + + L Sbjct: 26 IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYV--LMLTIPAIVAFGLPAW 83 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+I + ++ + + NG I+ AD Sbjct: 84 VAVIPAILMCVAVGVIVERAAYKPVREKGNSMTALITAIAMSLLLENGSQAIFGAD---- 139 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 TV ++I+ + + ++ + ++ L++ T A R + ++++ Sbjct: 140 -YQTVPTIIQIPTLAIGKLKIDGATIITIVLGVIIMVALQLFVTYTKQGKAMRAVSEDKE 198 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +A + S ++S M + +LGG+ Sbjct: 199 ASILMGINVNSTITLTFAIGSGLAAVASLMYCVSYPQVS-PMMGAMLGLKAFVAAVLGGI 257 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V L + ++ S ++ L +V+L++ Sbjct: 258 GSIPGAMVGGLVIGVVESLTKAYIGTITSGVITSAFSDA-----IVFGILIIVLLVKPSG 312 Query: 339 LLRL 342 L+ Sbjct: 313 LMGE 316 >gi|206890605|ref|YP_002248608.1| high-affinity branched-chain amino acid transport system permease protein livm [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742543|gb|ACI21600.1| high-affinity branched-chain amino acid transport system permease protein livm [Thermodesulfovibrio yellowstonii DSM 11347] Length = 318 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 118/282 (41%), Gaps = 18/282 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A+ ++ + L Y + Q ++ A G +I++G G + + + IG Sbjct: 5 IALFIIFIVAVCLLPFFISGYWLRVLTQTFMFAAIATGSNIIIGYTGYPAFGNIAFFGIG 64 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY +L ++Y +S +P A+ +++G+P L+ +G Y AIAT+ + E + I+ Sbjct: 65 AYVTGVLMTKYEISFIATLPFCALGGFIVAILLGIPLLRLKGHYFAIATVGVMEAMKKIV 124 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 IT G G + F YY +L + LS +I Sbjct: 125 DNMTEITGGGLG-----------------LTLPIMEGDPAYIYKFFYYTILLIMLLSIAI 167 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + ++ A R IR ++ A + K A+ +S A + +AG +A I Sbjct: 168 AFIVWKSKFGYALRAIRIDEDAASVMGINTALYKTFAWGISGALVSIAGGAYAYWLTYID 227 Query: 258 PDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 P + ++ + ++++LGG T++ IL + E+ Sbjct: 228 PSTVFVTSYSVKMFAMILLGGATTIFGPMLGAFILELISEIV 269 >gi|241518274|ref|YP_002978902.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862687|gb|ACS60351.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 361 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 115/313 (36%), Gaps = 19/313 (6%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + IL ++ A +++ G GL+S+ + GAY+ +G+ Sbjct: 35 PFIVSRGVIQDLFFILTMLVLAQNWNLLAGYAGLISVGQQVFVGFGAYTMFGCVILFGVD 94 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + I ++ ++S A + + + G Y AI T +++E+ + +L +WK + G Sbjct: 95 PVVAILIAGVLSAALAIPTAFFTFRLYGPYFAIGTWVVAEVVRLLLAQWKALGGGTG--T 152 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 R +R + + Y++ L + + I L R+ Sbjct: 153 SLPREATRDMMGVGAMRDLFGMKASEAGDTLTYWLALILAVATIGFIYGLLRSKQGLGLA 212 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK--FSENIIV 269 +RDN++A ++ K + ++ G+AGA + RISPD V Sbjct: 213 AVRDNEQAARAVGVDARRMKTLVYLATAFMTGIAGALIYVQKARISPDAAFSVTDWTAYV 272 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 I IV+ GG+ ++ I + L + ++ + Sbjct: 273 IFIVVTGGIGTIEGPILGVIIFFLLQNLLADY---------------GSWYLLMLGLLGI 317 Query: 330 LVILMRSHSLLRL 342 ++L+ L L Sbjct: 318 AIMLLAPRGLWGL 330 >gi|56696376|ref|YP_166733.1| branched-chain amino acid ABC transporter, permease/ATP-binding protein [Ruegeria pomeroyi DSS-3] gi|56678113|gb|AAV94779.1| branched-chain amino acid ABC transporter, permease/ATP-binding protein [Ruegeria pomeroyi DSS-3] Length = 582 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 102/302 (33%), Gaps = 39/302 (12%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 LIY + A G+ + G G+L L + + AY I I L A++ Sbjct: 32 LYLIYGIAAQGIGFLWGKTGVLPLGQALFFGFAAYVTAITLRAETGLITELALAVAVLVA 91 Query: 105 ACGMIMGLPSLKFR-----GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 L +L FR G Y ++ TL + I + I +T G G+ D Sbjct: 92 IAVFACALAALIFRGRNDSGPYFSLITLALVMIAEQIAGTATTLTGGFNGLSGFD----- 146 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + YYV++G+ + ++ L R ++ R + DN+ Sbjct: 147 -------------SLGKLDPFAGFYYVIVGVTVAVSLLLFVLNRLPVNLIARAVADNEPR 193 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMA-GAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L K +AFA S+ +A G + + ++P F + ++ + +GG Sbjct: 194 LQLLGFPTHIIKGAAFAFSAVIAALAGGGCLPSHQGIVTPTSMGFGLSAELVILTAVGGR 253 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + ++ Y+ LM +A LV+L Sbjct: 254 YHVLGPLIGAVLVGWASAELRDSFPYWE---------------LLMAVAFILVVLKAPGG 298 Query: 339 LL 340 + Sbjct: 299 IA 300 >gi|255523334|ref|ZP_05390304.1| inner-membrane translocator [Clostridium carboxidivorans P7] gi|296188267|ref|ZP_06856659.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Clostridium carboxidivorans P7] gi|255512988|gb|EET89258.1| inner-membrane translocator [Clostridium carboxidivorans P7] gi|296047393|gb|EFG86835.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Clostridium carboxidivorans P7] Length = 294 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 110/305 (36%), Gaps = 20/305 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +YV+ A GL+++ G L LL + Y GA++ + + + +I++ + Sbjct: 6 LFNGITMGSVYVLIAIGLTMIYGILELLHFAHGVVYMAGAFAAISCITLFHTNIFVAVVA 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++S G + + + K + I LI +L I G I ++ Sbjct: 66 AMIVSAFFGWFIEIFAYKPVRNAPKITALISGIGMAIVLENIYRIIYGSQTIAFPEQSIT 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + + Y+++ L + L+L+ T A R + + Sbjct: 126 PVKTYNLSKN--------ISITNYQIYIIVMTIILIIILHLYLKYTKNGMAMRAVSMDFD 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + SA G+AG A + + P M + +IV+LGG+ Sbjct: 178 ASSLMGINVNKIISITFIIGSAMAGVAGTLVALYFNAVYPAM-GSMPGMKAFAIVVLGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ L V G + F + L LV+L+R Sbjct: 237 GSIPGTIVGGLFLGIVESFADGYLGNFIVGKDAFA-----------FVILILVLLIRPSG 285 Query: 339 LLRLR 343 L + Sbjct: 286 LFGKK 290 >gi|115372841|ref|ZP_01460146.1| branched-chain amino acid ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] gi|310818508|ref|YP_003950866.1| branched-chain amino acid ABC transporter permease [Stigmatella aurantiaca DW4/3-1] gi|115370108|gb|EAU69038.1| branched-chain amino acid ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] gi|309391580|gb|ADO69039.1| Branched-chain amino acid ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 306 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 90/307 (29%), Gaps = 17/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + IY + A G ++V G L L++ +G Y R L Sbjct: 8 LINGLAAGTIYALVALGYTMVYGVLKLINFAHGDVMMVGVYMGYGTAYALGRQAQKSVLG 67 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + +++ A ++G +F L + + I + ++ Sbjct: 68 VVLIFLVAMAGCALLGFLIERFAYRPLREKPRLTALITAIGISFALSYGFQLDIGFLPGA 127 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + V+ + LL L + + +T A R + Sbjct: 128 APRAFPEIIQPSEWLIIGDRDVVVWNWQIMSLLIAVGLMVGLQYLVFKTRFGRAMRAVSY 187 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + F + S AG +A ++P M + ++ Sbjct: 188 DHRVAALMGIPTDRIIAVTFMIGSGLAAGAGLLYAIKDTSVNPLM-GLFVGLKAFVAAVI 246 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ + +L V E G + + F L +V+L+R Sbjct: 247 GGIGHVPGAVVGALMLGLVEEFVVGYVASTWRDAVAFG-------------ILIIVLLVR 293 Query: 336 SHSLLRL 342 L Sbjct: 294 PGGLFGR 300 >gi|227819704|ref|YP_002823675.1| branched-chain amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|227338703|gb|ACP22922.1| branched-chain amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 336 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 71/329 (21%), Positives = 132/329 (40%), Gaps = 28/329 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + ++ + Y + GL++++G G + L + Sbjct: 5 LLRFVSAGFVGVAALALPLFVPDFLLFEISIAIAYGIAILGLNLLLGFTGQICLAQGALF 64 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ IL +G + +PVSA+ +G+ G+++GLP+L+ +G LAI T ++ F Sbjct: 65 GVGAYTTAILNVNFGWDPVVTLPVSAITAGSVGVLIGLPALRLQGLQLAIITFGVAAAFP 124 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +L+K +T G G+ L E ++Y + L S Sbjct: 125 QLLLKMDSLTGGVTGLATDQPLAPEWF--------------PGSQEAWLYGLSLICAVAS 170 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +I L R R +RDN +L + +L+AF VSSA G+ G F Sbjct: 171 ILVISRLMRGDTGRLMRALRDNPVIAETLGVNLTKGRLAAFGVSSALAGLGGGLFCILNG 230 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISP F ++I ++ I+GG+TS+ ++ V + ++ Sbjct: 231 FISPQSFLPMKSIDILIGGIVGGITSIPGALIGAVFIVFVPGVTTDISPALGG------- 283 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L ++++ + LR Sbjct: 284 -------LIYGLCLMGMMMVARQGIAGLR 305 >gi|152970170|ref|YP_001335279.1| high-affinity branched-chain amino acid transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955019|gb|ABR77049.1| high-affinity branched-chain amino acid transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 357 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 98/336 (29%), Gaps = 27/336 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L ++ ++ +IL Y + A L +V G G+LSL I +A+G Y+ Sbjct: 33 FLALLPASHPLAVPSWLLTLSGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92 Query: 83 IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + S S ++ L + A Sbjct: 93 MYLMRQAAGDGLPAFMSFLSWSELPWFWWGTQHFAWAMALVVLVPGLLALVFGWFAFRSK 152 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + ++ G + + + FP + ++ + Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTRASLFMATVL 212 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ + L ++ +RD + KL + +S+ G+AGA + Sbjct: 213 LLLLTLWLGSALAQSKFGRILTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALY 272 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I+P + +I V LGG +L ++ G + Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGLVNGAKSI------------ 320 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + + +V L ++ L Sbjct: 321 --FTVAMPEYWQLFLGLIFIIVTLFLPRGVMGLLRR 354 >gi|170737626|ref|YP_001778886.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|169819814|gb|ACA94396.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 308 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDVSVPVLISGAFEIHLGGDYDVTIPYARLLIVCVTLVLMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + + + G + +++P F I Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|15966340|ref|NP_386693.1| branched chain amino acid ABC transporter permease [Sinorhizobium meliloti 1021] gi|307307810|ref|ZP_07587539.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] gi|307317472|ref|ZP_07596912.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|15075611|emb|CAC47166.1| Putative branched chain amino acid transport system permease ABC transporter [Sinorhizobium meliloti 1021] gi|306897061|gb|EFN27807.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|306901676|gb|EFN32278.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] Length = 342 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 115/338 (34%), Gaps = 43/338 (12%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + D + +LI ++ GL +G+ GLLS + +GAY+ +L + Sbjct: 22 SQLLGIRLYDRIATNLLISLVLVIGLQTFMGNSGLLSFAHIGFMGLGAYTSAVLTIPAQM 81 Query: 91 S-----------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 L + + +++ I+ P ++ I + + + Sbjct: 82 KGMALPDLYEFMKVVEVSPLLAMLAAGVLAAVVAAIVAYPLMRLSDAASVITSFALLVVL 141 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 ++ W TNG ++ + + +F Sbjct: 142 YTVMNNWSAFTNGPRTLFGLPKTTDMPVAAIVAAIVVVVALAF----------------- 184 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + R R+++ A +L I + AF +++ G+ GA + Sbjct: 185 --------KESRTGKLLRASREDEVAAAALGADIPQLRWRAFILAAFIAGIGGALWGHFI 236 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +P F E ++I+++++GG +++ T ++ E G + L Sbjct: 237 TSFAPKAFYLKETFLIITMLVIGGANTVTGAVAGTILVTFAYEGLRGTEGALNATALGAG 296 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + ++ +A+ V++++ L R + L R Sbjct: 297 QVVGLTE-IVLALAMIAVMIVKPGGLFPNREIGHILTR 333 >gi|330826231|ref|YP_004389534.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|329311603|gb|AEB86018.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 309 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ IGA + ++ Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGLMQDAMPGAPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + +L F + +A L S ++ + + + + Sbjct: 68 LMLLLATLVACVVAATLNFAIEKVAYKPLRNSPRLAPLITAIGMSILLQTLAMIVWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ F + +L AS++ + T + A R +N + Sbjct: 128 --KPYPTLLPAAPFQVGGAVITTTQILILGVTVVALASMVYLVSYTRLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ M F + + + GG+ Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G +L + I L +V+ +R Sbjct: 245 GNLAGAVVGGLLLGLIEAIGSGYIGVLTGGVLG-----SHYTDIFAFIVLIIVLTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|186477790|ref|YP_001859260.1| inner-membrane translocator [Burkholderia phymatum STM815] gi|184194249|gb|ACC72214.1| inner-membrane translocator [Burkholderia phymatum STM815] Length = 323 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 134/324 (41%), Gaps = 16/324 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +Y LLL + A + Y + ++L + +FA ++++G GLLS + A Y Sbjct: 5 ALYVLLLIALIVAPFAGAYPVFVM-KVLCFALFAGAFNLLIGYTGLLSFGHAMFLATAGY 63 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 LS L + + A G+++GL +++ +G Y A+ TL ++++ + ++ Sbjct: 64 VTGYAIQTLALSPELGVLAGTAAATALGLVVGLFAIRRQGIYFAMVTLALAQMVYFVFLQ 123 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ + R F + ++ +Y+V+L + L+ +I+ Sbjct: 124 A--------------PFTHGEDGLQGVPRGKLFGVLSLSSDLTLYFVVLAVMVLAFLLIV 169 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + I++N+ SL KL AF +S+ G+AG+ + Sbjct: 170 RIVHSPFGQVLIAIKENEPRAISLGYDTNRFKLLAFILSAGLAGLAGSLKVIVLGFETLG 229 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318 ++ + +V+ + ++GGM +L A+++ + + + + + +++ S Sbjct: 230 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGSGLASMTGVEWFRSLGE 289 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 290 SATIVTGLIFIACVLAFRRGIVGE 313 >gi|46578963|ref|YP_009771.1| high-affinity branched-chain amino acid ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603439|ref|YP_967839.1| inner-membrane translocator [Desulfovibrio vulgaris DP4] gi|46448376|gb|AAS95030.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563668|gb|ABM29412.1| L-leucine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-valine ABC transporter membrane protein [Desulfovibrio vulgaris DP4] gi|311232818|gb|ADP85672.1| inner-membrane translocator [Desulfovibrio vulgaris RCH1] Length = 302 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 91/299 (30%), Gaps = 17/299 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY + A G ++V G + L++ Y IGA++ +I+ G+ + + + Sbjct: 14 LTRGSIYALIALGYTMVYGIIELINFAHGEVYMIGAFTALIVAGVLGIYGFPEAGILIIA 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + LI ++ + + Sbjct: 74 AIVAVIYCAAYGFTLEKVAYKPLRDA---PRLSPLISAIGMSIFLQNYVILAQTSDFVPF 130 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 R + I +++ + L+++ T + A R N+K Sbjct: 131 PRLVPDLAILEPIAHITGTSDVLIIVTSAITMVGLTLFIKYTRMGKAMRATAQNRKMAML 190 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L F + S+ + G A+ +++ F I + +LGG+ S+ Sbjct: 191 LGIDADRVISLTFIIGSSLAAIGGVLIASHIGQVNF-AIGFIAGIKAFTAAVLGGIGSIP 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +L G + L F L L+++ R +L Sbjct: 250 GAMAGGLVLGLCESFATGYVSSDYEDALAF-------------ALLVLILIFRPSGILG 295 >gi|226940833|ref|YP_002795907.1| LivH [Laribacter hongkongensis HLHK9] gi|226715760|gb|ACO74898.1| LivH [Laribacter hongkongensis HLHK9] Length = 309 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 94/305 (30%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G +GL++ IGA + + + L Sbjct: 8 ILNGLVLGSIYALIALGYTMVYGIMGLINFAHGEVTMIGAMVTISVLGVFSSMGLALPGP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + + F + +A L + ++ Sbjct: 68 VLVLMALMVAVPTCMLVGFLIERVAYRPLRNAPRLAPLITAIGLSI--VLQNVAILIWGR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 SL+ +++ + A ++L +T + A R N Sbjct: 126 NYIPFPSLLPHNPIDVFGASITDLQVVIIVLAIAIMAGLLLMTEKTKLGRAMRATSQNPA 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + F + + +AG AA+ D+ M F + + +LGG+ Sbjct: 186 VAGLMGVNVNSVISATFVIGAGLGAIAGVMVAANYDQAHSHM-GFIIGLKAFTAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G L + L LV++ R Sbjct: 245 GNLGGAVVGGILLGVIESLGAGYIGSLTGGFLG-----SHYQDIFAFAVLILVLVFRPSG 299 Query: 339 LLRLR 343 L+ R Sbjct: 300 LMGER 304 >gi|330807261|ref|YP_004351723.1| high-affinity branched amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375369|gb|AEA66719.1| Putative high-affinity branched amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 304 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 87/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 MILGTLVFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ S FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAMRVDIGSGFVQLTYTKIFILIAAFAGMGLLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|77456781|ref|YP_346286.1| inner-membrane translocator [Pseudomonas fluorescens Pf0-1] gi|77380784|gb|ABA72297.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Pseudomonas fluorescens Pf0-1] Length = 304 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 88/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LMLGTLIFTIVITAVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQGAKQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + + FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLTGAWRVEVGTGFVQLTYTKVFILVAAFVGMGLLTYVIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L LV++ R Sbjct: 248 GSLPGAMLGGIILGISESLFSGLVNSDYKDVFSFS-------------LLVLVLVFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|229588104|ref|YP_002870223.1| high-affinity branched-chain amino acid transporter permease [Pseudomonas fluorescens SBW25] gi|229359970|emb|CAY46824.1| high-affinity branched-chain amino acid transport system permease [Pseudomonas fluorescens SBW25] Length = 304 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 89/304 (29%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQGAKQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + S FV ++L+ A + ++ T + R + ++K Sbjct: 129 GIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L ++++ R Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVVILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|192290903|ref|YP_001991508.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192284652|gb|ACF01033.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 323 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 115/324 (35%), Gaps = 30/324 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + + ++ L L + Y + Q L + + A ++++G GLLS + Sbjct: 21 MIAFGIMTALLLVVPFTGVYPFFVM-QGLCFALLACAFNLLIGYGGLLSFGHAMFLGTAG 79 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y +GL L I V + A ++ GL +++ +G Y A+ TL +S++ I + Sbjct: 80 YVSGHALKVWGLPPELAIIVGTAAAFALSVLTGLIAIRRQGIYFAMITLALSQLLYFIYL 139 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + ++ + + F + +Y+V+L L II Sbjct: 140 QA--------------PFTHGEDGIQGIPQGKLFGFIDLSNATTLYFVVLAGFLLGFLII 185 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + IR+N+ SL KL AF +S G AGA S Sbjct: 186 YRAINSPFGEVLKAIRENEPRAISLGYKTDQYKLLAFILSGTLAGFAGALKVFVAQNASL 245 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +S + ++ + ++GG+ ++ ++I + + G Sbjct: 246 TDVHWSMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGF---------------GQ 290 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 291 WVTVIQGVIFVACVLTFRRGIVGE 314 >gi|288935584|ref|YP_003439643.1| urea ABC transporter permease [Klebsiella variicola At-22] gi|288890293|gb|ADC58611.1| urea ABC transporter, permease protein UrtB [Klebsiella variicola At-22] Length = 524 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109 I G LG++++ IGAYS ++ + +PV+ +++ GM Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + ++ L I ++ + + + + ++ Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + +VLL +CF + RT + R + N+ Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + AF + S G+ G + + I +V+LGG+ L+ A Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ L+++ + L I R L L+ Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521 >gi|15600105|ref|NP_253599.1| branched chain amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|107104011|ref|ZP_01367929.1| hypothetical protein PaerPA_01005084 [Pseudomonas aeruginosa PACS2] gi|116053061|ref|YP_793380.1| putative permease of ABC branched chain amino acid transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218894007|ref|YP_002442876.1| putative permease of ABC branched chain amino acid transporter [Pseudomonas aeruginosa LESB58] gi|254238370|ref|ZP_04931693.1| hypothetical protein PACG_04508 [Pseudomonas aeruginosa C3719] gi|296391749|ref|ZP_06881224.1| putative permease of ABC branched chain amino acid transporter [Pseudomonas aeruginosa PAb1] gi|313109909|ref|ZP_07795838.1| putative permease of ABC branched chain amino acid transporter [Pseudomonas aeruginosa 39016] gi|9951189|gb|AAG08297.1|AE004904_5 branched chain amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|115588282|gb|ABJ14297.1| putative permease of ABC branched chain amino acid transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126170301|gb|EAZ55812.1| hypothetical protein PACG_04508 [Pseudomonas aeruginosa C3719] gi|218774235|emb|CAW30052.1| probable permease of ABC branched chain amino acid transporter [Pseudomonas aeruginosa LESB58] gi|310882340|gb|EFQ40934.1| putative permease of ABC branched chain amino acid transporter [Pseudomonas aeruginosa 39016] Length = 304 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 87/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 MINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIALALLAFFGLQNFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLLFTVLVTCTYGWVIERIAYKPLRNSTRLAPLISAIGMSLILQNYVQVAQGPRQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F FV ++L+ A + +R T + R + ++K Sbjct: 129 GIPTLLDGALKFHVGDGFVQLTYTKLFILIASLIGMAVLTYVIRYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L GM + + F L L+++ R Sbjct: 248 GSLPGAMLGGLVLGVAEAQFSGMVNTDYKDVFAFS-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|319761905|ref|YP_004125842.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|317116466|gb|ADU98954.1| inner-membrane translocator [Alicycliphilus denitrificans BC] Length = 309 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ IGA + ++ Sbjct: 8 IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGLMQDAMPGAPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + +L F + +A L S ++ + + + + Sbjct: 68 LMLLLATLVACVVAATLNFAIEKVAYKPLRNSPRLAPLITAIGMSILLQTLAMIVWKPNY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ F + +L AS++ + T + A R +N + Sbjct: 128 --KPYPTLLPAAPFQVGGAVITTTQILILGVTVVALASMVWLVSYTRLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +A++ M F + + + GG+ Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + + G +L + I L +V+ +R Sbjct: 245 GNLAGAVVGGLLLGLIEAIGSGYIGVLTGGVLG-----SHYTDIFAFIVLIIVLTLRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|70731037|ref|YP_260778.1| branched-chain amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68345336|gb|AAY92942.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 336 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 112/301 (37%), Gaps = 15/301 (4%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 L K L V+ L+ + + ++ +ILI+ + A ++++G G Sbjct: 6 PLPFAKTQSRGLLWLVIAVLIGLPLVLPSA------TLASEILIFALAALACNLLLGYTG 59 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 LLS I + GAY +L L ++ + +A++ +++G +++ G Y + Sbjct: 60 LLSFGQGIFFGAGAYCAALLMIHLQLGLFSALLGAALVGALLALLVGALAIRRTGIYFVM 119 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL S++ I T G G+ R IR + + Y Sbjct: 120 LTLAFSQMAYFIAYTLSDWTGGDNGLLSVPRPE---------IRIGDTVLLSLADARYFY 170 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + + L + + + IR+N+ ++ K+ F +S A G+ Sbjct: 171 GFVAVLFLLIFIGARRVIASPFGSTLMAIRENETRAAAIGYDTRHFKILVFMLSGAVTGI 230 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA +A + + + ++ + I+GG SL ++ + E + Sbjct: 231 AGALYAMLLHFVPLSNIDLAMSENILIMTIVGGTGSLFGSLLGAGAIVLLGEFLSELWPR 290 Query: 305 Y 305 + Sbjct: 291 W 291 >gi|325529171|gb|EGD06147.1| inner-membrane translocator [Burkholderia sp. TJI49] Length = 308 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVSAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIVLMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + + + G + +++P F I Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|256788376|ref|ZP_05526807.1| branched chain amino acid transport permease [Streptomyces lividans TK24] gi|289772268|ref|ZP_06531646.1| branched chain amino acid transport permease [Streptomyces lividans TK24] gi|289702467|gb|EFD69896.1| branched chain amino acid transport permease [Streptomyces lividans TK24] Length = 310 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 98/308 (31%), Gaps = 13/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---SYVILGSRYGLSIWLL 95 + + + +Y + A G ++V G + L++ + GA+ + + G S+ + Sbjct: 8 LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMTGAFGALTVYMYILPDGTSMLIA 67 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P+ + + + + + +F L A + LI ++ A Sbjct: 68 LPLMLIGAVIVSTTVAVGAERFAYRPLRGAPRLAP------LITAIGLSLALQQAVWAWY 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 I F V + ++ + A + ++ RT + Sbjct: 122 PDAKSARPFPQIDGGPFHIGNVTLQTGDIFLFVVAPVSMAILGFFVMRTRTGRGMQATAQ 181 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + AFA+ + F + G + +I M F + + +L Sbjct: 182 DPDTAKLMGVNTDRIIVIAFALGAVFAAVGGVAYGLRYGQIEFKM-GFILGLKAFTAAVL 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ +L L S+ +++I + L R Sbjct: 241 GGIGNIYGAMIGGVVLGVAETLATAYIADIPGLDKFGSQSWADVWAFILLILVLLF---R 297 Query: 336 SHSLLRLR 343 LL R Sbjct: 298 PQGLLGER 305 >gi|311105713|ref|YP_003978566.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310760402|gb|ADP15851.1| inner-membrane translocator 28 [Achromobacter xylosoxidans A8] Length = 343 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 115/311 (36%), Gaps = 15/311 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + L F+ + + ++G +ILIY + A L++V+G GL+S + Sbjct: 9 WALPLLFLVLAAVPFVAQWLGEPFYVTLGARILIYALAALALNLVLGFAGLVSFGHAMFL 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +G Y+ IL + WL + V + +I+G L+ G + TL +++F Sbjct: 69 GLGCYAVGILSYYGFGNGWLQLAVCIAVCALVALIVGTVCLRTSGIGFIMITLAFAQMFY 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + ++ F + +Y+ + +S Sbjct: 129 FLAVSLREYGG---------------DDGLNIYEASSFGLFDLGGSQPVYWAAWAVLLVS 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + ++ LRR+ R N + +L ++ +L+A+ S G+AG A Sbjct: 174 SLAMVRLRRSPFGMILRATHANPRRVDALGYSVFGVRLTAYVASGVLTGVAGLLLANLTA 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 SP + + +I +V++GG+ ++ + + E M ++ + Sbjct: 234 FASPSYMSWPVSGELIVMVVIGGLGNVLGPIVGAVAYLLMEEAFKSMTQHWMLLMGPAVV 293 Query: 315 SFNMRHTTLMV 325 M Sbjct: 294 IIAMVAKGGYG 304 >gi|301057656|ref|ZP_07198734.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [delta proteobacterium NaphS2] gi|300448270|gb|EFK11957.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [delta proteobacterium NaphS2] Length = 304 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 101/303 (33%), Gaps = 20/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ Y +GA+ L + G+ + Sbjct: 15 LVNGITLGGVYALIAVGYTMVYGVIQLINFAHGEVYMLGAFLAYTLVAVVGMPFLPAFLL 74 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I G+++ + + +A LI + L + G ++ Sbjct: 75 TLIICAVLGVVLDYVAYRPLRKAPRLAALITAIGMSIFLQNMALLIWGSQIKSYPRKVLP 134 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + + V ++L + L + +T I A R I ++ Sbjct: 135 LFFSETA------LNFGDVTLSWLQLFILSVTLLFMIILHLTIHKTRIGMAMRAISQDKT 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA GMAG + I P M + I + +LGG+ Sbjct: 189 ASALMGIGVNRVISFTFAIGSAMGGMAGVLVGLYYNAIFPTM-GYVAGIKAFAAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + G + + + VIL + Sbjct: 248 GSVPGAMLGGGVLGIAEVMGAGYIS-------------SEYRDGISYAVMIAVILFKPSG 294 Query: 339 LLR 341 L+ Sbjct: 295 LIG 297 >gi|260597975|ref|YP_003210546.1| hypothetical protein CTU_21830 [Cronobacter turicensis z3032] gi|260217152|emb|CBA30973.1| hypothetical protein CTU_21830 [Cronobacter turicensis z3032] Length = 561 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 97/299 (32%), Gaps = 33/299 (11%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109 I G LG++++ +GAY+ + L +PV+ M++ GM Sbjct: 288 ITYGLLGVINMAHGEMLMLGAYATWCVQNALAAFAPQWLAFYPVLALPVAFMVTACAGMA 347 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + ++ L+ + +LI+ +T G + VA+ + I+ Sbjct: 348 LERAIIRHLYGRPLET-LLATWGISLMLIQLVRMTFGAQNVEVANP-----AWLSGGIQV 401 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + M +VLL + F ++ +T + R + N+ Sbjct: 402 LPNLILPWNRLVVMGFVLLVLFFTWLAL----TKTRLGMNVRAVTQNRAMAACCGVPTGR 457 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + AF + S G+ G A S+ I +V+LGG+ L+ A Sbjct: 458 VDMLAFGLGSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 515 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 L ++ +++ + L I R L L+ + Sbjct: 516 GLGIFNKILEPQVGAVLGK-------------IAILVMVILFIQKRPQGLFALKGRAVE 561 >gi|288918710|ref|ZP_06413057.1| ABC transporter related protein [Frankia sp. EUN1f] gi|288349912|gb|EFC84142.1| ABC transporter related protein [Frankia sp. EUN1f] Length = 926 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 117/326 (35%), Gaps = 19/326 (5%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 ++ + + V LL + GAT + + + L + ++V G G Sbjct: 319 PTEVSPWRRRALWGVVTAGLLAYTAWGAT---DFWAGLLAEGLATAIVLMSFTVVTGIGG 375 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 ++SL V GA++ IL S + + +++ G ++ LP+ + G LA+ Sbjct: 376 MVSLAQVAFVLAGAFTTGILLSHDVPYLP-ALLAGVIVAALTGAVIALPTRRLGGLPLAL 434 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 +TL ++ I QN+L + + I+NG G + +M Sbjct: 435 STLALAFIGQNLLFQIRDISNGSGGWAIPAP---------------DLGIVDTANPRWMV 479 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 +LL + L+ ++ LR ++ A +R + + + KL F +S+A G Sbjct: 480 VMLLVLLGLTIWLVHALRTSSTGRAMLAVRSSDVGAQTNGIAVGRMKLLVFVISAAIAGF 539 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G A +R R++ + ++ ++ I + + A + + + Sbjct: 540 GGVLLATTRGRVTNTDYDAFLGLVWLATTITFSIRRPAGAVLAGLVAALAPQAFENIPDS 599 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFL 330 + F + Sbjct: 600 THFMQILFGLGAIGLARDPDGALAAI 625 Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 72/274 (26%), Gaps = 8/274 (2%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAM 101 + +Y + A GL++ + G+ + AY + + + + I + Sbjct: 12 LVTGALYAILASGLTLTYQTSGVFNFGQGGVAFSTAYLFFQLNTGQGLPVVPSAILCVGV 71 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYVADRL 156 + A G ++ D A ++ + L + + Sbjct: 72 FAPALGWLLHRILFNPLRDASIAARMVATLGLLIALPALCLWISAMLREKASLDLPTVED 131 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F + + + +I + +L F + + +RRT I R Sbjct: 132 VFRFPGLGPSPKEIYKLGNGLILDSDKLAILGAAIFSALLLWYLVRRTRIGLEMRASVSR 191 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 A ++ S G+ G A + + I V+L Sbjct: 192 PAIAALRGVDPDRASAVSWITSCGLAGLVGVLLAPMFGLANFTYNTLL--FVSIPAVVLA 249 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 S+ +L L G Sbjct: 250 RFASIPIAMAGGLLLGVAQNLVDGYVDLDITGFP 283 >gi|33861528|ref|NP_893089.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634105|emb|CAE19431.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 378 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 100/341 (29%), Gaps = 31/341 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ F+ + + ++ + L + A G+ ++ G GLLSL I +A+G Sbjct: 14 FVIWVLIIAFIIAAPSILPVFRLNLLGRYLSLAIVALGVDLIWGFTGLLSLGQGIFFALG 73 Query: 78 AYSYVILGS-----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 Y + ++ + I +P+L Sbjct: 74 GYCAAMYLQITSSSEFPNNIPEFFGLYGVDNLPFFWEPFRSPIFSLFAIWVIPALVAGIL 133 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 + + ++ +IL + + + + + F + Sbjct: 134 GFLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSESIQ 193 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 ++ + + W+ + N IRD++ + K F+++ Sbjct: 194 RMFFWFTALLVIAAWFFSKWVVKGRFGNILIGIRDDEPRVRFTGYNPVLFKTIIFSIAGG 253 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA + +SP +I ++ V +GG +L ++ L Sbjct: 254 LAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLGAILGAVLINYAKSLVSE 313 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+ +L Sbjct: 314 --------------ALPASWMFIQGGLFILVVTALPEGVLG 340 >gi|134294951|ref|YP_001118686.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134138108|gb|ABO53851.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia vietnamiensis G4] Length = 396 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 95/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 53 VAIGIGVPLAALVAPEASAFHLSAYTMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 112 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 113 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 172 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I + + + R FP + Sbjct: 173 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRIAGFPIT 232 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 233 SPGTRTVLLLLSFATLVLAFIAARAIVSSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 292 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+ +AGA + I+P +I + V +GG +L + G Sbjct: 293 TLSAVLCAIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 352 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 353 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 385 >gi|302335541|ref|YP_003800748.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Olsenella uli DSM 7084] gi|301319381|gb|ADK67868.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Olsenella uli DSM 7084] Length = 291 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 104/304 (34%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + LL+ +GAY I+ ++ GL+ L + + Sbjct: 7 VLNGLQLGSIYALVALGYTMVYGIILLLNFAHGDIIMVGAYISWIVMAQLGLNPILAVIL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S G+++ + + ++ LI + L + G Sbjct: 67 SVAGCTLLGVLIDKVAYAPLRNAPRLSILITAIGVSYFLENGAQLVFGADAKV------- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V S + + ++ +A + ++RT + A R + ++ Sbjct: 120 ----VPSYFDATPITFADLQLSPIALLTIVVTVVSTAILTFLVQRTKLGKAMRAVSEDMG 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FAV SA G+ ++ + + +P M +LGG+ Sbjct: 176 AARLMGINVNTTISFTFAVGSALAGIGAVLYSMAYTQATPTM-GIMLGTKAFVAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ L + + ++ + L +V++++ Sbjct: 235 GSIPGAVIGGLLVGFAEVLVSAIGLSVWKDA-------------VVFLLLIIVLIVKPTG 281 Query: 339 LLRL 342 +L Sbjct: 282 ILGR 285 >gi|296533376|ref|ZP_06895975.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296266302|gb|EFH12328.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 292 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 124/306 (40%), Gaps = 21/306 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ ++ I+ + A L++++G G+ S+ + + +GAY+ L + + L Sbjct: 3 AYLLNLATLATIFGILAASLNLLIGYAGIFSMAHAVFFGLGAYAGAQLALLWVPDLLLAC 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + A +S A + + LP+L+ RG+Y A+L + + + + +T G G+ Sbjct: 63 LLGAALSAALSLCLALPALRVRGEYFVAASLGLQMMAVTVFSEAHALTGGHGGLVGIPPA 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V L + + +I L R + A IRD+ Sbjct: 123 T--------------LLGLDLTDPARLLLVCLAVLGGALLLIRLLMRGSFGRALMAIRDS 168 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + K A A+ + G+AGA FA ++ + F ++I+V+++VI+G Sbjct: 169 ESAAEAFGKDVRALKTLAVALGCSLAGVAGALFAFYMAFVNVESFTLEQSILVMAMVIIG 228 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G +L A + V L + + +A+ L+++ R Sbjct: 229 GTATL-------AGPLIGVLLLLLLPAGLSFLPFIPPTQIGAVQQLVYGLAMVLLMIYRP 281 Query: 337 HSLLRL 342 L L Sbjct: 282 AGLAGL 287 >gi|254254445|ref|ZP_04947762.1| branched-chain amino acid ABC transporter permease protein [Burkholderia dolosa AUO158] gi|124899090|gb|EAY70933.1| branched-chain amino acid ABC transporter permease protein [Burkholderia dolosa AUO158] Length = 308 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVSAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALIVSVIVTGLYGFAVERIAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIALMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + + + G + +++P F I Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|206576241|ref|YP_002238596.1| urea ABC transporter, permease protein UrtC [Klebsiella pneumoniae 342] gi|288935583|ref|YP_003439642.1| urea ABC transporter permease [Klebsiella variicola At-22] gi|290509619|ref|ZP_06548990.1| urea ABC transporter, permease UrtC [Klebsiella sp. 1_1_55] gi|206565299|gb|ACI07075.1| urea ABC transporter, permease protein UrtC [Klebsiella pneumoniae 342] gi|288890292|gb|ADC58610.1| urea ABC transporter, permease protein UrtC [Klebsiella variicola At-22] gi|289779013|gb|EFD87010.1| urea ABC transporter, permease UrtC [Klebsiella sp. 1_1_55] Length = 357 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 98/336 (29%), Gaps = 27/336 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L ++ ++ +IL Y + A L +V G G+LSL I +A+G Y+ Sbjct: 33 FLALLPASHPLAVPSWLLTLSGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92 Query: 83 IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + S S ++ L + A Sbjct: 93 MYLMRQAAGDGLPAFMSFLSWSELPWFWWGTQHFAWAMALVVLVPGLLALVFGWFAFRSK 152 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + ++ G + + + FP + ++ + Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTRATLFMATVL 212 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ + L ++ +RD + KL + +S+ G+AGA + Sbjct: 213 LLLLTLWLGSALAQSKFGRILTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALY 272 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I+P + +I V LGG +L ++ G + Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGLVNGAKSI------------ 320 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + + +V L ++ L Sbjct: 321 --FTVAMPEYWQLFLGLIFIIVTLFLPRGVMGLLRR 354 >gi|169837103|ref|ZP_02870291.1| inner-membrane translocator [candidate division TM7 single-cell isolate TM7a] Length = 298 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 107/302 (35%), Gaps = 20/302 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + IY + A G ++V G + L++ +GAY ++ G+ + L I +S Sbjct: 10 INGLQTGSIYALIALGYTMVYGIVKLINFAHGDILMVGAYVT-LIAVSNGMPLILAIVLS 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + G+++ + + + I+ LI + +L I G R+ Sbjct: 69 IIFCAILGVVIDFFAYRPIRNAPKISALITAIGMSFLLESLALIIFGAN-----PRVIDP 123 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 L + F+ +V++ ++ L++++T + A R + + A Sbjct: 124 KYIPAFLSNDNKMKLGFLEISTLTIFVIVITIICMIALNLFIKKTKLGKATRAVSQDTGA 183 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + FA+ S + GA +A +I P M + + GG+ Sbjct: 184 AQLMGINVNRTIAITFAIGSGLGALGGALYAIVYPQIEPYM-GMLPGLKAFIAAVFGGIG 242 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ +L + G + + + + F L L+++ R + L Sbjct: 243 SIPGAMVGGYVLGLLEAYVKGSSLTTWANPIVFG-------------VLILILIFRPNGL 289 Query: 340 LR 341 Sbjct: 290 FG 291 >gi|53720263|ref|YP_109249.1| putative branched-chain amino acid transport system permease [Burkholderia pseudomallei K96243] gi|126441644|ref|YP_001060081.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|167817041|ref|ZP_02448721.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167903910|ref|ZP_02491115.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167920134|ref|ZP_02507225.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|226193831|ref|ZP_03789433.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237813473|ref|YP_002897924.1| urea ABC transporter, permease protein UrtC [Burkholderia pseudomallei MSHR346] gi|254180949|ref|ZP_04887547.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254196075|ref|ZP_04902500.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|52210677|emb|CAH36661.1| putative branched-chain amino acid transport system, permease component [Burkholderia pseudomallei K96243] gi|126221137|gb|ABN84643.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|169652819|gb|EDS85512.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184211488|gb|EDU08531.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|225934136|gb|EEH30121.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237504271|gb|ACQ96589.1| urea ABC transporter, permease protein UrtC [Burkholderia pseudomallei MSHR346] Length = 400 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 57 IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 116 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 117 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 176 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 177 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 236 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + S + + + IRD + L + + KL + Sbjct: 237 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 296 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ +AGA + I+P +I + V +GG +L + G Sbjct: 297 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 356 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 357 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 389 >gi|57237904|ref|YP_179152.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni RM1221] gi|86150445|ref|ZP_01068670.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151086|ref|ZP_01069302.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 260.94] gi|86153187|ref|ZP_01071392.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596097|ref|ZP_01099334.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 84-25] gi|148926073|ref|ZP_01809759.1| branched-chain amino-acid ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|157415274|ref|YP_001482530.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|205355776|ref|ZP_03222545.1| branched chain amino-acid ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218562633|ref|YP_002344412.1| branched-chain amino-acid ABC transporter permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283956415|ref|ZP_06373895.1| LOW QUALITY PROTEIN: branched-chain amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] gi|57166708|gb|AAW35487.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni RM1221] gi|85839040|gb|EAQ56304.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|85842256|gb|EAQ59502.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85844072|gb|EAQ61282.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190938|gb|EAQ94910.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360339|emb|CAL35135.1| branched-chain amino-acid ABC transport system permease protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845552|gb|EDK22644.1| branched-chain amino-acid ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|157386238|gb|ABV52553.1| branched-chain amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|205346210|gb|EDZ32844.1| branched chain amino-acid ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|283792135|gb|EFC30924.1| LOW QUALITY PROTEIN: branched-chain amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] gi|284926247|gb|ADC28599.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni IA3902] gi|307747916|gb|ADN91186.1| High affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni M1] gi|315058460|gb|ADT72789.1| High-affinity branched-chain amino acid transport system permease protein LivH [Campylobacter jejuni subsp. jejuni S3] gi|315927978|gb|EFV07300.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315932146|gb|EFV11089.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Campylobacter jejuni subsp. jejuni 327] Length = 298 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GAY+ + + + + + Sbjct: 10 LVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+ + K I+ LI + L + Sbjct: 70 AMIFAACVGIATDRIAYKPLRQAPRISLLITAIGISFFLQNLFNMLFTSTPRTFTPP--- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 VI V + +++ L ++ A R + + + Sbjct: 127 -------SYFEESVNFGGVITTYGSLMVPALTFVILIAVLWILYKSKYGIAIRALAFDIQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ SA + G F+AA+ + P M + + +LGG+ Sbjct: 180 TVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLI-GLKAFAAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + F + I L ++L R Sbjct: 239 GSVVGAVLGGLIIGFTEVVV-----------VAFFPDLSGFKDAFAFIFLVFILLFRPTG 287 Query: 339 LLR 341 +L Sbjct: 288 ILG 290 >gi|134292089|ref|YP_001115825.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134135246|gb|ABO56360.1| L-leucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein [Burkholderia vietnamiensis G4] Length = 308 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALIVSVLVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDYDVTVPYARLLIVGVTLVLMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + + + G + +++P F I Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|293602623|ref|ZP_06685066.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818995|gb|EFF78033.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 355 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 132/358 (36%), Gaps = 11/358 (3%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MS L + L LA++ + L ++ +IL++++ +++ Sbjct: 1 MSFRLLSGDPPRSPLLALALIAIVALLATAPFLFPGPKSLAVAAKILVFIILVASYDLLL 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 G G++S + + IGAY I +++ + M+S A +++GL SL+ Sbjct: 61 GYTGIVSFAHTMFFGIGAYGVAIASIRMEPGWTAVFAGVGAGLMVSLAFALLIGLASLRV 120 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 R + A+ TL ++ FQ ++ + +T G+ G+ + F Sbjct: 121 RAIFYAMITLAVAAAFQTLVSQLSTLTGGEDGLNFKVPQWLRPAFRPLSEPVFGVTIDG- 179 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I YY++ +C + ++L + + + IR+N ++ + + + + Sbjct: 180 --RIITYYLIAAVCVVLFLMLLRIVNSPFGRVLQAIRENPFRAEAIGYRTVLYRSLSNLL 237 Query: 238 SSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 ++AF +AGA +A PD F + ++ ++++GGM ++ ++ + Sbjct: 238 AAAFATLAGALYALWLRYNGPDTSLSFEIMLNILLMLVIGGMGTMYGAVVGASLFVFAQS 297 Query: 297 LCCG----MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ R + I + + + Sbjct: 298 YLQDGLHVIHDAVTGVAPLALLFEPDRWLLWLGILFVVSVYYFPTGIAGRLREFARRR 355 >gi|289646551|ref|ZP_06477894.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraD [Pseudomonas syringae pv. aesculi str. 2250] Length = 304 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 85/304 (27%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P Sbjct: 9 MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F S FV ++L+ + ++ T + R + +K Sbjct: 129 GVPTLLEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQYRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|162418360|ref|YP_001605868.1| hydrophobic amino acid ABC transporter permease [Yersinia pestis Angola] gi|162351175|gb|ABX85123.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis Angola] Length = 533 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ S + + + +I+ + Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQFAPHWLALYPLIALPVAFFITAGIGMA 319 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W GI + L + + + Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQGIRMLFGPQNLEVANPAWLSGGVQVLPNL 377 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 378 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 437 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 438 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + +L R L L+ Sbjct: 496 LEPLIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530 >gi|121610927|ref|YP_998734.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121555567|gb|ABM59716.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 342 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 74/306 (24%), Positives = 125/306 (40%), Gaps = 18/306 (5%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L L L +Y + I +Y + GL++VVG G LS+ V AIGAY+ IL Sbjct: 23 LFALALPFLVGNEYQLHVLTLIGVYWVLVAGLNLVVGYAGQLSVGHVGLLAIGAYTLAIL 82 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 R G+ + + V+ M+ G CG ++GLP+L+ G Y A+ATL S I L+ +T Sbjct: 83 TGRAGIDALMALAVAGMLGGLCGFLLGLPALRLPGFYFAMATLAFSLIVTEQLVAHSTLT 142 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G AG+ T YY+++ + + + R Sbjct: 143 GGGAGMPAPRFAAPFDTARG------------------FYYLVVVIGLAVTWLAWNISRR 184 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 +RD+ A ++ ++ KL+ F S G+AG FA+ ++ I+P+ F F Sbjct: 185 MWGRGLIALRDSDVAAAAVGIPVLRLKLAVFTFSGVTAGVAGCLFASLQNYITPEAFTFE 244 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + +I+GG ++ T +L + E+ + + + Sbjct: 245 LGMFFFICIIIGGRGNIIGPFAGTVVLTLLPEIAAPFAKLGNLLYSVLLLTAVLLIPKGI 304 Query: 325 VIALFL 330 AL Sbjct: 305 GSALAA 310 >gi|153950567|ref|YP_001401757.1| hydrophobic amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|152962062|gb|ABS49523.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pseudotuberculosis IP 31758] Length = 515 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 82/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ S + + + +I+ + Sbjct: 242 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQFAPHWLALYPLIALPVAFFITAGIGMA 301 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W GI + L + + + Sbjct: 302 LER--TVIRHLYGRPLETLLATWGISLMLIQGIRMLFGPQNLEVANPAWLSGGVQVLPNL 359 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 360 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 419 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L + ++ Sbjct: 420 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 477 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 478 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 512 >gi|325264687|ref|ZP_08131416.1| high affinity branched-chain amino acid ABC transporter, permease protein [Clostridium sp. D5] gi|324029979|gb|EGB91265.1| high affinity branched-chain amino acid ABC transporter, permease protein [Clostridium sp. D5] Length = 292 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 99/307 (32%), Gaps = 24/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IG++ I S G++ L + Sbjct: 5 SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGSFVVFITTSATGMNPLLAV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +S ++ GM++ + K +A LI + L + G + Sbjct: 65 LLSVVVCTILGMVIERLAYKPLRGASPLAVLITAIGVSYFLQNIALLLFGANPKSFTSVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V + C + ++ +T A + ++ Sbjct: 125 KIPALNLA----------GGKLIISGETIVTIVTCIVIMIVLTMFMKTKPGQAMLAVSED 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ S +AG ++ ++P I + G Sbjct: 175 KGAAQLMGVNVNKTISLTFAIGSGLAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ IL + L + + F L +V+L++ Sbjct: 234 GIGSIPGALLGGVILGVIEILSKAYISSQLSDAIVFG-------------VLIIVLLVKP 280 Query: 337 HSLLRLR 343 +L + Sbjct: 281 TGILGKK 287 >gi|172063958|ref|YP_001811609.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] gi|171996475|gb|ACB67393.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] Length = 308 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDFDVTIPYARLLIVCVTLVLMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + + + G + +++P F I Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|262044363|ref|ZP_06017426.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038251|gb|EEW39459.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 357 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 98/336 (29%), Gaps = 27/336 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L ++ ++ +IL Y + A L +V G G+LSL I +A+G Y+ Sbjct: 33 FLALLPASHPLAVPSWLLTLSGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92 Query: 83 IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + S S ++ L + A Sbjct: 93 MYLMRQAAGDGLPAFMSFLSWSELPWFWWGTQHFAWAMALVVLVPGLLALVFGWFAFRSK 152 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + ++ G + + + FP + ++ + Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTRASLFMATVL 212 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ + L ++ +RD + KL + +S+ G+AGA + Sbjct: 213 LLLLTLWLGSALAQSKFGRILTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALY 272 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I+P + +I V LGG +L ++ G + Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGLVNGAKSI------------ 320 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F + + + +V L ++ L Sbjct: 321 --FTVAMPEYWQLFLGLIFIIVTLFLPRGVMGLLRR 354 >gi|170290441|ref|YP_001737257.1| ABC-type branched-chain amino acid transport system, permease component [Candidatus Korarchaeum cryptofilum OPF8] gi|170174521|gb|ACB07574.1| ABC-type branched-chain amino acid transport system, permease component [Candidatus Korarchaeum cryptofilum OPF8] Length = 317 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 127/332 (38%), Gaps = 26/332 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ LL + ++ ++ +Q+L++ A ++ G G SL +GAY Sbjct: 5 LMIAFLLLALIVPPFLDEFSLTVLVQMLMWAYLAMAWDVIGGYGGQFSLGHAAFLGLGAY 64 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L +GL W+ I ++ +I+GA G ++G SL+ RG + A+ T+ +E+ Q +L Sbjct: 65 TSTLLLEDFGLIPWVGIWIAGIIAGAAGALVGFASLRLRGPFFALGTIAFAELTQLLLTY 124 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 K IT G GI +I F +I+ YY++L + Sbjct: 125 LKDITGGPLGI---------------MINETGFEYMMFDKQIYYYYLMLAFAIFGILFLK 169 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI-SP 258 + R+ A +R+++ A ++ + AK+ A+S+ GM G +A I Sbjct: 170 YFERSKFGVALIALREDEDAAEAVGIDVYRAKVLGAAISAFLTGMGGTLYAQWIHYIRPD 229 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + + + +I ++GG S I++ V + L + Sbjct: 230 TLVRLDFSTQIAAIDVVGGAGSPYGGIIGALIIVPVSLYLNALFGGMIAGLSVLLYGVVL 289 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + Sbjct: 290 LIVVV----------LMPGGIYGFLRRFLARR 311 >gi|163758111|ref|ZP_02165199.1| branched-chain amino acid ABC transporter, permease protein, putative [Hoeflea phototrophica DFL-43] gi|162284400|gb|EDQ34683.1| branched-chain amino acid ABC transporter, permease protein, putative [Hoeflea phototrophica DFL-43] Length = 329 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 103/302 (34%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + + ++ ++ + I + GL+I +G GL+S + +G Y+ IL S Sbjct: 22 PLVAHFADEPFLVTLATRATILALAGVGLNIALGLGGLVSFGHAAFFGLGGYAVGILASH 81 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 + L+ + +++ L ++ G + + I Sbjct: 82 HQTFEPLMTSPFIINGTNQMLVLWLVAIVVSGIAALLIGALSLRTSGVYFIMITLAFAQM 141 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 + + G S+ FP + + + + + + + Sbjct: 142 IYYFAISWPAYGGEDGLSIYVRNAFPGINTLRPLDFFLLCYAVLIVVLIGQWRMTGARFG 201 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 A + +R N+ +L + +L+AF +S G+AGA +A +SP M + + Sbjct: 202 VALQAVRQNEGRVAALGLSPYRIRLAAFVISGMVTGLAGALYADLNRFVSPTMISWHLSG 261 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ +ILGG+ L + + L ++ L S + + Sbjct: 262 EIMVFIILGGVARLFGPVVGACLFVLFEHLFGSFTTHWQFFLGAALLSVVLFARGGFIGL 321 Query: 328 LF 329 + Sbjct: 322 VV 323 >gi|158315823|ref|YP_001508331.1| inner-membrane translocator [Frankia sp. EAN1pec] gi|158111228|gb|ABW13425.1| inner-membrane translocator [Frankia sp. EAN1pec] Length = 816 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 122/337 (36%), Gaps = 16/337 (4%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + ++ L L + + + + + Q ++ + ++++ G G +SL Sbjct: 345 DPRRALITRLIGFAALGVVAIVVLARGDQLWVFLVTQAVVIGIIFLSITVITGMAGQISL 404 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 AIGA++ L RY LS+ + + A I+ G ++ LP K G + AIATL Sbjct: 405 CQGTFAAIGAFTVFQLVDRYNLSVLMAALIGAAIAAVVGAVLSLPIRKLGGIWTAIATLA 464 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + F +L+K I G + + + L + + I + V+L Sbjct: 465 FAYFFDAVLVKLSWIGGGDSALLQGTAVPRPVIGPWDLADDKYYLVFASVILIVVAMVVL 524 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + R+ +R ++ S+ + A+L AFAVS+ G+ GA Sbjct: 525 QL-----------RKGTFGRTLVALRGSEVGAESIGISAGRARLVAFAVSAFIAGLGGAL 573 Query: 249 FAASRDRISPDMFKFSENIIVI-SIVILGGMTSLSKIAKATAILIGVVELC--CGMNFYY 305 A ++ ++ + IV+ G ++ A A +L + + Sbjct: 574 LAIQQENVNYGTNFVPFAALFWVVIVVTLGSRTVRGALNAAASFAVFDQLILKGTVFAWI 633 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMR--SHSLL 340 S F + + V+ I L+ Sbjct: 634 LRSPTAIPDFFPISGKWVYVLFGLAAIQFARHPEGLV 670 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 83/259 (32%), Gaps = 4/259 (1%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 +Y + A G + + G+ +L + A + + W +P + Sbjct: 32 AVYALVALGFVLTYKTSGVFNLAFGAQAYVSA---AMYFKARVIWEWPTVPSVILAVFVM 88 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 ++GL + L A + + L P + A V Sbjct: 89 APLIGLILERLIFRPLRTAPAVARLVVAAGLAVAIPYLFDILADFTAVAGVTPVGVVPDG 148 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 F P Y + A ++ R +AI R + ++ K Sbjct: 149 ANVFYDPFGVYAYSRNELVSMGVALVAMAGLVALFRFSAIGVRMRAVVESPKMTELNGIP 208 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 ++A+SS F G+AG A + ++ F FS ++ I+ +G +TSL K Sbjct: 209 ADRVSALSWALSSLFAGVAGVLIAPRFNTLAAADF-FSLMVVAIAAAAVGRLTSLPKAMA 267 Query: 287 ATAILIGVVELCCGMNFYY 305 +L ++ + Sbjct: 268 GGLLLGIIIAQLNTFLPRW 286 >gi|319745543|gb|EFV97845.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 289 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 102/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y +GA+ L + L+ +L + + Sbjct: 5 LVNGLILGSIYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLI 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + S G+++ + + IA LI + +L G Sbjct: 65 AMLGSAFLGVVIEYLAYRPLRKSTRIAALITAIGVSFLLEYGMVYLVGAD---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I ++ + +L L ++ +++T + A R + + Sbjct: 115 -TRAFPQAIHTVKYNLGPITITNVQLIILGIALLLMLTLQFIVQKTKMGKAMRALSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + ++ + L + + ++ L L+ L+R Sbjct: 233 GIIPGATIGGFVIGILETLATALG-------------VSDFRDGIVYAILILIFLIRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|300690695|ref|YP_003751690.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Ralstonia solanacearum PSI07] gi|299077755|emb|CBJ50393.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Ralstonia solanacearum PSI07] Length = 311 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 97/305 (31%), Gaps = 6/305 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G LG+++ IGA S + + L Sbjct: 8 IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGAMSALTAINFLQKFFPHLPDW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +I + + + + +A L + ++ + + Sbjct: 68 VTLILALLFAMPVCAIVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L S+ ++L + + L + RT + A R +NQ+ Sbjct: 128 LTFPQLLPSSPIDIGSTGATITGKEIAIILVSLAVMIGLTLLVNRTKLGRAMRATAENQR 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + F + +A +AG A + M F + + +LGG+ Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + L G + + I L V+L R Sbjct: 247 GNLAGAMVGGVLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLIGVLLFRPSG 301 Query: 339 LLRLR 343 ++ R Sbjct: 302 IMGER 306 >gi|319763122|ref|YP_004127059.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330825185|ref|YP_004388488.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317117683|gb|ADV00172.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329310557|gb|AEB84972.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 295 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 106/311 (34%), Gaps = 19/311 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + S IY + A GL++ G GLL+ + +GAY+ I + Sbjct: 3 DFAVSTATIAGIYALMALGLNLQAGYAGLLNFGHIAFAGLGAYAAGIGFGLGWA-PLPSL 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++ G M K DY IATL ++EI + I +T G GI L Sbjct: 62 ALGVGLAMLLGAFMAGLGRKLASDYWGIATLAIAEILRTIATNEGWLTGGANGISAIPAL 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + F + + ++ L A R +R+ Sbjct: 122 FDSLPRPWNAVAFLALVLAVLAAAAWL--------------CARLGNGRFGRALRLMREE 167 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L + K A S+A + G +A P+ SE ++ ++V++G Sbjct: 168 PQLATCLGYNLRTLKTRAIMASAAVTALGGFLYAHYMSFAGPEYMLASETFLLWTMVMIG 227 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ + + A + + + + + + L+ L +L RS Sbjct: 228 GLGNTLGVLVGVATV----QAAHVLVPFAKDWIGFDSDVAGALRLGLIGAILLACLLWRS 283 Query: 337 HSLLRLRTPSN 347 L+ + Sbjct: 284 EGLVPEKLRKI 294 >gi|227872324|ref|ZP_03990679.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] gi|227841831|gb|EEJ52106.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] Length = 293 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 107/307 (34%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ +G Y+ + ++ GL I L I Sbjct: 5 SYLLNGISLGSVYAIIALGYTMVYGIAKMLNFAHGDILMVGGYAAFLAFNQMGLGIPLSI 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 S I A G+++ + K ++A LI + +L + G + Sbjct: 65 LFSMAICTALGVLVERVAYKPLRSANSLAVLITAIGVSYLLQNIALLLFGANPKSFQSFV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++ +L ++ ++L++ +T A + ++ Sbjct: 125 KLPALKLAG---------GQLVISGETMVTILVGILVAVVLLLFIHKTKAGQAMLAVSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +AG ++ ++P I +LG Sbjct: 176 KGAATLMGVNVNGTIALTFAIGSALASVAGILLCSAYPTLTPTT-GAMPGIKAFVAAVLG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + + F L +V+L++ Sbjct: 235 GIGSIPGAFIGGILLGVLENLSKAYISSKLSDAIVFS-------------VLIIVLLIKP 281 Query: 337 HSLLRLR 343 +L + Sbjct: 282 SGILGKK 288 >gi|330501700|ref|YP_004378569.1| inner-membrane translocator [Pseudomonas mendocina NK-01] gi|328915986|gb|AEB56817.1| inner-membrane translocator [Pseudomonas mendocina NK-01] Length = 522 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 91/296 (30%), Gaps = 33/296 (11%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--------SIWLLIPVSAMISGACGMI 109 I G LG++++ +GAY+ ++ + +P++ +++ GM Sbjct: 249 ITFGLLGVINMAHGEMLMLGAYTTYVVQLAFQKLAPGYLALYPLAALPIAFVVTACIGMA 308 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + ++ L+ + ILI+ +T G + VA+ + G Sbjct: 309 LERTVIRHLYGRPLET-LLATWGISLILIQLVRVTFGAQNVEVANPAWLSGGMQ------ 361 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 ++ ++ F+ L L +T + R + N+ Sbjct: 362 ---VLPNLVLPYNRIVIIGFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGR 418 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + AF + S G+ G A S+ S I +V+LGG+ L+ A Sbjct: 419 VDMMAFGLGSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVLAAF 476 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L V + +L R L L+ Sbjct: 477 GLGVVNKFLEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 519 >gi|294783607|ref|ZP_06748931.1| high affinity branched-chain amino acid ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA] gi|294480485|gb|EFG28262.1| high affinity branched-chain amino acid ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA] Length = 295 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 92/306 (30%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG---SRYGLSIWLL 95 I + IY + + G ++V G L++ IGAY + S GL +W+ Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYVSLFSIPALSSMGLPVWVS 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + +I G + + + + I+ LI + L Sbjct: 67 VIPAIIICAIVGCLAERIAYRPLRNSPRISNLITAIGVSLFLENVFMKVFTPNTRSFPKI 126 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + V ++ LS ++ L++++T A Sbjct: 127 FTQDPIKL----------GDSVQISFGAVVTIVVTVILSIALQLFMKKTKYGKAMIATSQ 176 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S +A + ++ +I P M I +L Sbjct: 177 DYSASALVGINVDRTIQLTFAIGSGLAAVAAVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L F L +V+L + Sbjct: 236 GGIGILPGAVMGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282 Query: 336 SHSLLR 341 +L Sbjct: 283 PTGILG 288 >gi|283954568|ref|ZP_06372087.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 414] gi|283793972|gb|EFC32722.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 414] Length = 298 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GAY+ + + + + + Sbjct: 10 LVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + GM + K I+ LI + L + Sbjct: 70 AMIFAACVGMATDRIAYKPLRQAPRISLLITAIGISFFLQNLFNMLFTSTPRTFTPP--- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 VI V + +++ L ++ A R + + + Sbjct: 127 -------SYFEKSVNFGGVITTYGSLLVPALTFVILIAVLWILYKSKYGIAIRALAFDIQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ SA + G F+AA+ + P M + + +LGG+ Sbjct: 180 TVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLI-GLKAFAAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + F + I L ++L + Sbjct: 239 GSVVGAVLGGLIIGFTEVIV-----------VAFLPDLSGFKDAFAFIFLVFILLFKPTG 287 Query: 339 LLR 341 +L Sbjct: 288 ILG 290 >gi|269928784|ref|YP_003321105.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] gi|269788141|gb|ACZ40283.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] Length = 370 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 111/337 (32%), Gaps = 13/337 (3%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L+ +V LL + + + + I V+ L I G+ GL+S V Sbjct: 16 FPLIVLVVGLLAIAAGTDLLAGRVFQRVVTVMFINVILVVALQIFTGNSGLMSFAHVAFM 75 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AIGAY + L + + +P+L G A ++ Sbjct: 76 AIGAYGSIWFSLSSQEKRLTLPDMPESWFLHQVHLPFIPALIAAGLVAAAVGAVLGVPLL 135 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + I A + ++ + F I + + G L Sbjct: 136 RLRDASFTIA------SFAWLIIVHSVALQWDALTRGSRTVFGIPQYTGLWTATGWMLLF 189 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ R + R RD++ A +S+ + + + A+ S +AG +A Sbjct: 190 VALAFLFREMPLGLKLRAARDDEAAAWSIGISSAWVRWVAWVFSVFVAAVAGGLWAHFIT 249 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK--- 311 SP+ F + ++++++I+GG S+S + E + + Sbjct: 250 TFSPNSFYLRQTFLIVAMLIIGGSGSVSGAVIGAVAVSLTSEALRSVENWLNLQRAAQTA 309 Query: 312 ----FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ +A+ V+++R L R R Sbjct: 310 LGQVIPFQLVGFTEIVIALAMIAVLILRPSGLTRGRE 346 >gi|90415641|ref|ZP_01223575.1| putative high-affinity branched-chain amino acid transport system permease protein [marine gamma proteobacterium HTCC2207] gi|90332964|gb|EAS48134.1| putative high-affinity branched-chain amino acid transport system permease protein [marine gamma proteobacterium HTCC2207] Length = 393 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 92/356 (25%), Gaps = 36/356 (10%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 K+ L + +L + + ++ + L Y A GL + G G+LSL Sbjct: 7 QKFLSPAELGGFIVLAILLFVVLPLSVDDFRLNLIGKYLSYSFVAMGLVLCWGYGGILSL 66 Query: 69 NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 + + IG Y + + L Sbjct: 67 GQGVFFGIGGYCMAMFLKLEASSVENTAIQSTPGIPDFMDWNQLTELPWFWEPFNSLGLS 126 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRSL 166 L + + I + + + L Sbjct: 127 LIAVILVPGLFAFLIGLAMFKRRVGGVYFAIITQAVAAILTILIVGSQGMTGGINGITDL 186 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + ++ +Y+V + F+ + ++ R+ + +RD ++ Sbjct: 187 RTLLGWDIRTDEAKVILYFVCVTFVFICLFLCQFVLRSKLGRLLVAVRDTEERVRFSGYN 246 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + K+ F ++ + GA F +SP +I ++ +GG SL Sbjct: 247 VDNFKIFIFTFAAMLSAIGGALFTLQVGFMSPSFVGIVPSIEMVIFCAVGGRLSLLGAVY 306 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + V+ + + L+ L Sbjct: 307 GALAVNFAKTTLSE--------------AIPELWLFALGGMFIAVVSIFPNGLMGL 348 >gi|325290335|ref|YP_004266516.1| urea ABC transporter membrane protein [Syntrophobotulus glycolicus DSM 8271] gi|324965736|gb|ADY56515.1| urea ABC transporter membrane protein [Syntrophobotulus glycolicus DSM 8271] Length = 361 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 105/346 (30%), Gaps = 27/346 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V + + + L L + ++ + + Y + A G+ ++ G G+LSL + + +GA Sbjct: 12 LVFFVIAIALLLAPLFLSDFRVNLLGKFIAYAILAIGIDLIWGYTGILSLGHGVYFGLGA 71 Query: 79 YSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 Y + S IP + + + L Sbjct: 72 YCVAMYLKLEAAGGKVPDFMSWSGLTAIPWFWEPFSNGFFSLMMAVAIPTVLAFVVGYLT 131 Query: 129 MSEIFQNILIKWKPITNGKAG---IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + + + S F F + ++ +YY Sbjct: 132 FKNRIRGVYLSILSQALAIIFVVLFVGQQAYTGGTNGLTSFRHMFGFSLANNATQMVLYY 191 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + + + L+ + L I IRD + K+ + +S+A G+A Sbjct: 192 IAVVLLILTYGLCKMLVGRRIGKILVAIRDGENRVRFSGYNPTAYKVFVYCLSAAIAGLA 251 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA F ISP +I ++ V +GG +L ++ + Sbjct: 252 GAIFVPLVGIISPAEMGIVPSIEMVIWVAIGGKGTLIGAVIGAMVVNALKS--------- 302 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 SF + + + V+L ++ L + R Sbjct: 303 -----GISESFPEIWSYFIGLVFIFVVLYMPLGIVGLVRKTAEKYR 343 >gi|307326073|ref|ZP_07605271.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113] gi|306888295|gb|EFN19283.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113] Length = 310 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 98/308 (31%), Gaps = 7/308 (2%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + + +Y + A G ++V G + L++ + IG + + + L Sbjct: 5 PQTLVNGLTLGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTIYIWLPSGTALS 64 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + M+ G + + + R Y L ++ + ++ Sbjct: 65 LALPLMLIGGVIASVAIATAAERFAY---RPLRGGPRLAPLITAIGLSIALQQAVWAFYP 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + S + + ++L+ ++ L++ ++ A + Sbjct: 122 DAKKPRSFPQFEGSSFEIFSDLHIQRGDAFLLIAAPVCMLALGLFVSKSRAGRAMQATAQ 181 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + AFA+ AF +A +I+ +M F + + +L Sbjct: 182 DPDTAKLMGINTDRIIVMAFAIGGAFAAVAALSHGLKYGQINFEM-GFIAGLKAFTAAVL 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ +L V L Y + L +V+L+R Sbjct: 241 GGIGNIYGAMLGGVVLGIVEALA---IKYIQDIPGMDQLGGGAWKDVWAFTLLIVVLLVR 297 Query: 336 SHSLLRLR 343 LL R Sbjct: 298 PQGLLGER 305 >gi|170694147|ref|ZP_02885302.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|170140887|gb|EDT09060.1| inner-membrane translocator [Burkholderia graminis C4D1M] Length = 357 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 108/327 (33%), Gaps = 26/327 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + + + + + Y+ S L+ + A + G G+L+L Sbjct: 23 IAPVTLWAAAVAAATIVPFFTGAYLLSTIRDALVMGLLALSYDFLWGRAGVLTLGHTTFL 82 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI--MGLPSLKFRGDYLAIATLIMSEI 132 +GAY + + ++G + + + +++ A + L R + AI ++ + + Sbjct: 83 GLGAYGFAVATVQFGQAPVVGLITGVVVAAALAAVVGYFLLFAGVRLHFFAIISMAVLIV 142 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 Q + W+ +T G G+ L + + +Y + G Sbjct: 143 AQQLATSWQSVTGGDTGVLGIPGLCVKVA----------GHIVDLSGPMASWYAVAGALL 192 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + ++ + R+ I N+ + F L F +S+ +AG AA Sbjct: 193 AATGLMWLVCRSRYGRVLAAIATNEWRAKACGYHTSFHLLLVFVMSAVVAAIAGCLMAAC 252 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 ++PD+F VI V +GG + A +L + + + Sbjct: 253 SGVVAPDVFSPLLATEVILWVAIGGRGTTGGPVIAAVVLTLLKQTVSTYTADGWP----- 307 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ +L + L Sbjct: 308 ---------LVLGGLFLGCVLFMPNGL 325 >gi|238894646|ref|YP_002919380.1| high-affinity branched-chain amino acid ABC transport system inner-membrane translocator [Klebsiella pneumoniae NTUH-K2044] gi|238546962|dbj|BAH63313.1| high-affinity branched-chain amino acid ABC transport system inner-membrane translocator [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 524 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109 I G LG++++ IGAYS ++ + +PV+ +++ GM Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + ++ L I ++ + + + + ++ Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + +VLL +CF + RT + R + N+ Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + AF + S G+ G + + I +V+LGG+ L+ A Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ L+++ + L I R L L+ Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521 >gi|229818483|ref|ZP_04448764.1| hypothetical protein BIFANG_03791 [Bifidobacterium angulatum DSM 20098] gi|229784353|gb|EEP20467.1| hypothetical protein BIFANG_03791 [Bifidobacterium angulatum DSM 20098] Length = 308 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 101/304 (33%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G + L++ +GAY ++ + Sbjct: 12 IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGAYVLMLTIPAIIACGLPA-WL 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + + + +G+ K + M+ + I + + Sbjct: 71 SVVPAILVCVAVGVLVEKAAYKPVREKGNNMTALITAIAMSLLLENGSQ------AVFGA 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ +I+ + + +L + ++ L++ T A R + ++++ Sbjct: 125 DYQTIPMIIQIPSLTIGDLKIDGATIVTVLLGVIIMIALQLFVSHTKQGKAMRAVSEDKE 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +A + S ++S M + +LGG+ Sbjct: 185 ASILMGINVNSTITLTFAIGSGLAAVASLMYCISYPQVS-PMMGAMLGLKAFVAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V L ++ + ++ L +V+L++ Sbjct: 244 GSIPGAMVGGLVIGVVESLTKAYIGTITGGVITSAFADA-----IVFGILIIVLLVKPSG 298 Query: 339 LLRL 342 L+ Sbjct: 299 LMGE 302 >gi|115359178|ref|YP_776316.1| inner-membrane translocator [Burkholderia ambifaria AMMD] gi|170697114|ref|ZP_02888209.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|171320825|ref|ZP_02909829.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] gi|115284466|gb|ABI89982.1| L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein [Burkholderia ambifaria AMMD] gi|170137950|gb|EDT06183.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|171093925|gb|EDT39042.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] Length = 308 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDVSVPVLISGAFEIHLGGDFDVTIPYARLLIVCVTLVLMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + + + G + +++P F I Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|229043720|ref|ZP_04191423.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus AH676] gi|229109420|ref|ZP_04239015.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock1-15] gi|228674046|gb|EEL29295.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock1-15] gi|228725619|gb|EEL76873.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus AH676] Length = 317 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 127/322 (39%), Gaps = 31/322 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + + I + ++S I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F YYV L + ++ Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + + Y+ S L + R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T ++ + +V+L+ L+ Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295 >gi|171913404|ref|ZP_02928874.1| inner-membrane translocator [Verrucomicrobium spinosum DSM 4136] Length = 391 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 100/356 (28%), Gaps = 36/356 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ + L + + ++ + L Y A GL ++ G G+LSL + + + Sbjct: 14 AISFAVFVALIAIILPLALPIFRLNLVGKYLSYGFVAIGLVLLWGRCGILSLGQGVFFGL 73 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF--- 133 G Y + + + L + + T +F Sbjct: 74 GGYCMAMFLKLEASDPVSTSIQTTPGIPDFMDWNQITQLPWFWEPFKSFTFASCAVFLLP 133 Query: 134 -------------------QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 +I GI + L + Sbjct: 134 GLIAFIIGWAMFRRRVGGVYFAIITQAIALILSLGIDGNQGFTGGRNGITDLKTLLGWDI 193 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + +Y++ + + SA + ++ T +RD + + + Sbjct: 194 RTTGAQYTLYFLCVFLLLASALLAKYIINTRFGRVLMAMRDREDRVRFSGYDVAMCRTFV 253 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 FA+++ G+ GA F +SP + +I ++ +GG S+ I+ Sbjct: 254 FALAAMLSGLGGALFVLQVGFMSPSLVGIIPSIEMVIFTAVGGRLSVIGAILGCLIVNF- 312 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 F ++ LM V++ L + S L+ Sbjct: 313 -------------GKTAFSEAYPDAWLYLMGGTFIAVVMFFPDGLAGILDKSGTLK 355 >gi|160881655|ref|YP_001560623.1| inner-membrane translocator [Clostridium phytofermentans ISDg] gi|160430321|gb|ABX43884.1| inner-membrane translocator [Clostridium phytofermentans ISDg] Length = 291 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 94/303 (31%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I+ + A G ++V G +++ +GAYS I + L + + Sbjct: 7 LINGLRTGSIFALIAIGYTMVYGIAKMINFAHGDIIMVGAYSLYIFIEKLNLPPVVAVIF 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+ + + K ++A LI + +L + Sbjct: 67 TMLVCTILGITIEKVAYKPLRKAPSLAVLITAIGVSYLLQSVALLIFKAT---------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + I + + + L++ T I +A R + ++++ Sbjct: 117 -PIPFSTFIEVPALHIGKITISGITIVTFIVTTVCMILLTLFVNHTKIGSAMRAVSEDKQ 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +AG F + + I + GG+ Sbjct: 176 AAQLMGINVNRTISITFAIGSMLAAIAGILFISQYPSL-RPTLGTLPGIKAFVAAVFGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + L + F L LV+L++ Sbjct: 235 GSIPGAMLGGLLLGVIESLSKAYISTELADAIVFG-------------ILVLVLLVKPSG 281 Query: 339 LLR 341 LL Sbjct: 282 LLG 284 >gi|309776675|ref|ZP_07671649.1| high affinity branched-chain amino acid ABC transporter, permease protein [Erysipelotrichaceae bacterium 3_1_53] gi|308915423|gb|EFP61189.1| high affinity branched-chain amino acid ABC transporter, permease protein [Erysipelotrichaceae bacterium 3_1_53] Length = 292 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 92/289 (31%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GAY I ++ L + + + Sbjct: 8 LVNGLSIGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAYVGFISIAQLHLGFFPALLM 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G G+++ + K + IA LI + L G L Sbjct: 68 AMVVCGVLGVVIERIAYKPLRNATRIAALITAIGVSYFLEYSTQKVMGPGVKTYPSVLSN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + + VI I ++ +R+T I + R + + Sbjct: 128 QTFHVFGIQIQMQQIYILVITIIL-----------MLALQFIVRKTKIGRSMRAVSVDAD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + I+P M I + GG+ Sbjct: 177 AAKLMGINVDATISYTFAIGSALAGAGGVLVGMYYNTINPLM-GMVPGIKAFVAAVFGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + + V L + + + + + Sbjct: 236 GIIPGAMFGGFFIGIVEALVTAYGSSLYKDAVVYAILILILIIKPAGLL 284 >gi|111222545|ref|YP_713339.1| putative ABC transporter ATP-binding protein [Frankia alni ACN14a] gi|111150077|emb|CAJ61772.1| putative ABC transporter ATP-binding protein [Frankia alni ACN14a] Length = 937 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 105/278 (37%), Gaps = 9/278 (3%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + +G Q + I L++ + A + +V G G +SL + + Sbjct: 343 LLVFGALAVIGLFVLQGQWLTALITSLVFGVIALSMVVVTGYAGQVSLTQLPLAGAAGFL 402 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L + L + V+A+ + G+++GLP+L+ RG +A+ T ++ + I + Sbjct: 403 VGPLTDDWHLPFPVAPLVAALFAMVLGVVIGLPALRVRGLTVAVVTFALAYALEAIWFRN 462 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 I + S + + L + L+A + Sbjct: 463 SDI---------VPSSGVDVPSPSLFGWDLGIGSGPSYPRVRFGLLCLVVLALTAVAVAR 513 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 LR + + + +R N+++ + + K+ AFA++S G+ G + I+ D Sbjct: 514 LRTSRLGSQMLAVRANERSAAAAGINVTHIKIVAFAIASFIAGVGGCLVGYQQGNITFDP 573 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + + + V + G+TS+S A + + + Sbjct: 574 VSAFSGLALFTTVYIAGITSVSGGVLAGFLAVEGLSYL 611 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 30/255 (11%), Positives = 70/255 (27%), Gaps = 7/255 (2%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV-----SAM 101 ++ A L + S G+++ AY+Y +L + + +P S + Sbjct: 30 SVFAALALALVVTYRSSGVVNFATSGLALYAAYTYALLRQGKFMILIPGLPKTVDLGSQL 89 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 A + + + + + A RL Sbjct: 90 GLAAAMALSLAITGVLGLLLYLVVFRPLRTAPPVARAVASIGVSVVFTGLTAARLGTTPL 149 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 +V + + Y L + ++ ++ R T A R + +K + Sbjct: 150 SVEPIYPSRLWTHGSFRVASDRVYFALTILAVALALGALYRFTRFGLATRAAAETEKGAY 209 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 + + + + G+AG A + + + ++ ILG L Sbjct: 210 LSGISPDRIAALNWIIGALVAGLAGILIAPIVPLV--PVAYTLFIVPALAAAILGRFQYL 267 Query: 282 SKIAKATAILIGVVE 296 + + Sbjct: 268 VPAVVGGLAIGMLQS 282 >gi|288573621|ref|ZP_06391978.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569362|gb|EFC90919.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] Length = 286 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 137/316 (43%), Gaps = 40/316 (12%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + + I +LI + A G+S++ G G+ +L A+G+Y+ IL YG++ Sbjct: 2 SAYAEGIFILLLINAIAAMGVSLLTGFTGIFTLGHAAYLALGSYTTAILTLDYGIAWLPA 61 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +++ G ++GLP+LK GDY AIA++ ++E + IL W+ +TNG G+ D Sbjct: 62 VLAGGIVAMVVGYLIGLPTLKLMGDYYAIASIGLAESIRLILENWQSLTNGARGLAGIDT 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L V L + A + L + + RD Sbjct: 122 FTTLP-------------------------VALSFFIVMAIVAFCLINGRFGRSLKACRD 156 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A L + ++++ ++S+ + G+AG +A I P MF ++ + ++V+ Sbjct: 157 DHVAAALLGFDVAKIRVASLSISALYCGLAGGLYAGFISFIQPMMFDMLKSTEMTAVVVF 216 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+S T ++ V EL ++ Y + + L LV+++R Sbjct: 217 GGLGSMSGCILGTTVITMVTELFRPISQY---------------RMLIYGLVLVLVMVLR 261 Query: 336 SHSLLRLRTPSNFLER 351 ++ L+R Sbjct: 262 PEGMMGQHEIGGLLKR 277 >gi|149913229|ref|ZP_01901763.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. AzwK-3b] gi|149813635|gb|EDM73461.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. AzwK-3b] Length = 315 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 104/331 (31%), Gaps = 28/331 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +LA+ L+ L Y +I++ +A G +I+ G GLLSL + +A Sbjct: 8 VLALHGGLVALLIGLHFVLPAYHHGNLARIMVLASYAIGYNILFGYTGLLSLGHALFFAA 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y + G + + + + L +L+ G I TL+ ++ Sbjct: 68 GMYGMALTIQHAGFTPAPALLSGIVAGALVSGALALLALRTTGVAFMIVTLMFAQAGYLT 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ + T G G + Y+ L + + Sbjct: 128 ILYFGEYTRGDEG-------------FVIQTAQRVLWGIDLSDPANRYFAALSLFAICLG 174 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + LWL R IR+N++ L KL A +S +GA + Sbjct: 175 LSLWLVRAPFGRVLVAIRENEERVRMLGYDTYAHKLGAMVISGTMAAASGAVYGLLFGYA 234 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +I + V+LGG ++ T + +++L G+ Sbjct: 235 GASFASVQYSIFPLLWVLLGGAGTVLGPFIGTLFMFYLIDLSSGI--------------- 279 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + + L + L L Sbjct: 280 TSAYMLIAGVTLVALTLFAPQGLAGEVRRRI 310 >gi|317121496|ref|YP_004101499.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter marianensis DSM 12885] gi|315591476|gb|ADU50772.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter marianensis DSM 12885] Length = 292 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 91/307 (29%), Gaps = 25/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A G ++V G + L++ + IGA++ + +GL + + Sbjct: 8 LLIGLSVGTIYALIALGYTMVYGVIKLINFAHGEVFMIGAFAGYYALTAWGLGFFPALLF 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +S G+ + + + + +A L + L G L Sbjct: 68 AMAVSSVLGVTIERVAYRRLRNSPRLAALTTAIGVSLFLQYVTIYLRGAQSEAYPALLPN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + M + + RT + A R + + + Sbjct: 128 RRLELMGASLRMDTVVLLAVAVALMVLLQFIV-----------HRTKVGKAMRAVSFDME 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + ++ + FA+ SA G AG + RI P M + +LGG+ Sbjct: 177 AARLMGISVNRTISATFAIGSALGGAAGVIYGLYYTRIDPLM-GILPGLKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V L F F + R Sbjct: 236 GSIPGAMVGGLVIGMVETLVSAAGLSLFRDAAAFLILILILLF-------------RPEG 282 Query: 339 LLRLRTP 345 L P Sbjct: 283 LFGRHMP 289 >gi|311695770|gb|ADP98643.1| urea ABC transporter, permease protein UrtC [marine bacterium HP15] Length = 374 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 97/346 (28%), Gaps = 33/346 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ V + L A + ++ + L Y + A + +V G LG+LSL +A Sbjct: 22 AVVLVTFLHLFMPQDSALHVSAFTVTLLGKYLCYALLAVAVDLVWGYLGILSLGHGAFFA 81 Query: 76 IGAYSYVIL-------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 +G Y+ + ++ +++ L Sbjct: 82 LGGYAMGMYLMRQIGDRGVYGDPILPDFMVFLNWQELPWFWHGFDMAWFAFIMVLLAPGL 141 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 + +A +I + + + + F Sbjct: 142 LALVFGFLAFRSRVTGVYLSIITQALTFALMLAFFRNEMGFGGNNGLTDFKDILGFNLRT 201 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 + ++ + I + + + RD + L + +L F Sbjct: 202 DATRLGLFIATGIALAIGYVICRGIVISKLGRVSVACRDAEARTRFLGYRVERVQLFVFV 261 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 VS+ G+AGA + I+P F +I ++ V LGG +L ++ Sbjct: 262 VSAMLAGVAGALYVPQVGIINPSEFSPLFSIEIVVWVALGGRATLYGAVIGAILVNYAKT 321 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + G+ + LV + + L Sbjct: 322 VFTGI--------------MPDAWLFALGGLFVLVTVFLPKGIAGL 353 >gi|260425590|ref|ZP_05779570.1| branched-chain amino acid ABC transporter, permease protein [Citreicella sp. SE45] gi|260423530|gb|EEX16780.1| branched-chain amino acid ABC transporter, permease protein [Citreicella sp. SE45] Length = 652 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 104/303 (34%), Gaps = 26/303 (8%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLIPVSAMISG 104 IY + A GL+I G +G++++ +GAY+ ++ Y LS+ + +P++ ++ Sbjct: 371 IYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIIPDYTLSLVVALPLAFAVTF 430 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 A G+ M +++ + + TL+ + L + G + Sbjct: 431 AAGVAMERLVIRW-LYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSP--------- 480 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 S + + V + + I+ L +T I R + N S+ Sbjct: 481 SWLDGAWVLNDVVGIANIRIAIFVLALIFLGLILFILNKTRIGLEVRAVTQNPGMAASMG 540 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + F + S G+AG S + + +V + ++ Sbjct: 541 INPDKINMLTFGLGSGIAGIAGIAIGLYAQVTSEMGANYIVQSFMTVVVGG--VGNVWGT 598 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ + + +N S + T M++ + L I R ++ L+ Sbjct: 599 LAGAGLIGILQKGIEFLNP-----------SNTLAAQTYMILFIILFIQFRPKGIVALKG 647 Query: 345 PSN 347 + Sbjct: 648 RAA 650 >gi|187479305|ref|YP_787330.1| ABC transporter permease [Bordetella avium 197N] gi|115423892|emb|CAJ50444.1| ABC transporter, permease protein [Bordetella avium 197N] Length = 289 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 123/311 (39%), Gaps = 41/311 (13%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ + + + A + + + G+L++ IGAY+ +L Y +S + + Sbjct: 14 NLVLTLGTNALLALSIWLTLA-CGMLAMANAAFMGIGAYAAALLTMNYDVSFPVALAAGM 72 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++GLP+L+ G YLA+ATL E+ + +++ IT G G+ + Sbjct: 73 AAPAVVAALIGLPTLRLSGVYLAMATLGFGEVVRVVILNTDTITGGALGLNGIPQ----- 127 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + ++ ++ + I+ +RR+ I A+ IR ++ A Sbjct: 128 --------------------VTQWWHVVLALVIVLFILWRVRRSKIGRAFDAIRGDETAA 167 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + K+ AF + G+AGA A I P+ + F + ++++ ILGG+ S Sbjct: 168 GLMGIDVRANKMLAFVAGAMIAGLAGALNAHLTFFIGPNEYGFDRGVEILTMAILGGIGS 227 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + I+ + EL G + + + L L++L + Sbjct: 228 LVGPVLGSTIITVLPELLRGFADF---------------RLVINGVILVLIVLFLPQGIW 272 Query: 341 RLRTPSNFLER 351 +L + Sbjct: 273 DPARFKRWLRQ 283 >gi|83746664|ref|ZP_00943713.1| LivH [Ralstonia solanacearum UW551] gi|207721436|ref|YP_002251877.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] gi|207742584|ref|YP_002258976.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|300703313|ref|YP_003744915.1| leucine/isoleucine/valine ABC transporter subunit membrane component [Ralstonia solanacearum CFBP2957] gi|83726617|gb|EAP73746.1| LivH [Ralstonia solanacearum UW551] gi|206586595|emb|CAQ17182.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206593978|emb|CAQ60905.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|299070976|emb|CBJ42285.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Ralstonia solanacearum CFBP2957] Length = 311 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 97/305 (31%), Gaps = 6/305 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G LG+++ IGA S + + L Sbjct: 8 IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGAMSALTAINFLQKFFPHLPDW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + + + + +A L + ++ + + Sbjct: 68 LTLVLALLFAMPVCAIVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L S+ ++L + + L + RT + A R +NQ+ Sbjct: 128 LTFPQLLPASPIDIGSTGATITGKEIAIILVSLAVMIGLTLLVNRTKLGRAMRATAENQR 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + F + +A +AG A + M F + + +LGG+ Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + L G + + I L V+L R Sbjct: 247 GNLAGAMVGGVLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLICVLLFRPSG 301 Query: 339 LLRLR 343 ++ R Sbjct: 302 IMGER 306 >gi|56696709|ref|YP_167070.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56678446|gb|AAV95112.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 339 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 118/336 (35%), Gaps = 9/336 (2%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + I+ + L+ +Y + + ++ L + +G+ + +L Sbjct: 6 AQRRGIVGAALLALILIAIGLAATWFGSRYQLRLVYGAYVNLLVVLALQVFMGNARVTNL 65 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + IGAY+ I + + L ++ +L L L Sbjct: 66 SHSAFMGIGAYAAAICVTPEKIKAISLPDAPWGLNAF--------ALDPVSSALIALVLT 117 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + + + G + +A + G + F + F I ++F ++ Sbjct: 118 GLVAWLVGVFIVRLTGIGATIVSLAVLVIVHGLFLYRTDIFKGNQAFFGIPQLFNLTWVV 177 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 G+ L I R + A R D++ ++ I +L A+ +S + +AG Sbjct: 178 GLAVLVVFITRGFRESRWGVALRASADDEVGAAAMGVDIHRLRLMAWVLSGVLLAVAGIA 237 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 +A IS F F+ + ++++ILGGM +++ T ++ +E + Sbjct: 238 YAYYLGTISARPFYFNHVFLTLAMLILGGMRTVTGAVLGTFLISFGLEWVRWLETGPVVL 297 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + + L + + L + +R L+ R Sbjct: 298 GIDLPEALGLSGIVLGGV-IVLTMALRPGGLMGDRE 332 >gi|325168847|ref|YP_004280637.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325064570|gb|ADY68259.1| ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 379 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 99/354 (27%), Gaps = 42/354 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A + +F ++ + + L+Y M +++ G G+L+L + + +G Sbjct: 9 IAAYVLFIAVIFAAPVFGDEFWLNRISKYLVYGMLGVAIALTWGYAGILNLGQGLFFGLG 68 Query: 78 AYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 AY + +W P + L Sbjct: 69 AYMLAMSLKLSSLTSLQQGSDRPVPDFMLWNAEPGAPTELCCINKGSFLWLPFQSQSVGL 128 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVA----------------DRLYFLGTTVRSLI 167 + +++ + L + + L Sbjct: 129 VLGIVLPVVIAGALGMLVFRKRISGVFVSIITLALVLLVRLVMVDAQPVTNGFNGLTDLG 188 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 F Y YY+ L+ + T + IRD+Q L + Sbjct: 189 WLTIGGIEFDPYSRATYYLCAACLSLTLIGARLIVETRAGMILQAIRDDQLRARYLGFDV 248 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 ++ F +S+ G+AG + + SP S ++ ++ +GG +SL Sbjct: 249 SLYQVFFFVISAGIAGVAGMLYVVVAEFASPTFMDLSFSVTMVVWAAVGGRSSLLGACIG 308 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + + + + ++ + LV+L L Sbjct: 309 AILINMIE------------AEVSETEALVEAWKAIIGLIFVLVVLFMPRGLGG 350 >gi|19704763|ref|NP_604325.1| branched chain amino acid ABC transporter permease [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19715091|gb|AAL95624.1| Branched-chain amino acid transport system permease protein livH [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 308 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 89/306 (29%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95 I + IY + + G ++V G L++ IGAY+ + + IW Sbjct: 20 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSMGLPIWTT 79 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + +I G + + + + I+ LI + + Sbjct: 80 VIPAIIICAVIGCLAERIAYRPLRNSPRISNLITAIGVSLFIENVFMKVFTPNTRSFPKI 139 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 T + + +L LS + L++++T A Sbjct: 140 FNQAPITF----------GNGINISFGAAITILTTVILSVGLQLFMKKTKYGKAMIATSQ 189 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S + + ++ +I P M I +L Sbjct: 190 DYAASELVGINVDRTVQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFIAAVL 248 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L F L +V+L + Sbjct: 249 GGIGILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 295 Query: 336 SHSLLR 341 +L Sbjct: 296 PTGILG 301 >gi|162447360|ref|YP_001620492.1| ABC transporter permease [Acholeplasma laidlawii PG-8A] gi|161985467|gb|ABX81116.1| ABC-type transport system, permease component [Acholeplasma laidlawii PG-8A] Length = 359 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 65/330 (19%), Positives = 135/330 (40%), Gaps = 18/330 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +++ L+ + + + ++ + G SI++G GL SL AIG Sbjct: 24 ILLFMFLMLVVPLLLGFPASTLTFLTKFMVLSIVGLGFSILLGYTGLASLGTAGFIAIGT 83 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y + ++ S++++I V ++ G I+G+ SL+ G YLAI TL +SEI L Sbjct: 84 YVLGFMHNQMNASLFVVIIVGIALALLLGAIVGVISLRIEGMYLAIITLGLSEIIIEFLR 143 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 ITNG G+ + F T + Y Y ++ + + + Sbjct: 144 NAISITNGNGGLQLQGFSIFGITHST----------VNLEYIQAFYIFIIVVLGIFMLLY 193 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + A +++N A ++ +I+ +L AF +S+ + G + + P Sbjct: 194 SNIVTSQTGRAMLAVKNNTSAAQAMGISILKYRLLAFILSTITALVGGILYVSIDAYTEP 253 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +++ + ++ +++ +ILGG S+ + I+ G+ ++ + F Sbjct: 254 NLWTLAISLNILAAIILGGSKSMWGVLIGMFIIFGLRDVV--------LVRVPFFAENGN 305 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 I + L+I+ L++L F Sbjct: 306 AIFFFTGIIVILIIMFYPQGLIKLLEKQWF 335 >gi|110668657|ref|YP_658468.1| ABC-type branched-chain amino acid transport systems, permease protein II [Haloquadratum walsbyi DSM 16790] gi|109626404|emb|CAJ52864.1| ABC-type branched-chain amino acid transport systems, permease protein II [Haloquadratum walsbyi DSM 16790] Length = 355 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 119/351 (33%), Gaps = 48/351 (13%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY----------- 74 L + ++ ++ IY + GL+I G GL++ V + Sbjct: 6 LITLISLPGWSSFLLTVLTIAGIYSLLTVGLNIHYGYTGLINFGHVAFFAAGAYAAALLT 65 Query: 75 ------AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 IGA L + + + + + G +G+ S + YLAIAT Sbjct: 66 IPPPAQTIGAEYIFGLNLPMPIGFLISLIGATITGGLLSACIGMTSARLGSHYLAIATFA 125 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 ++ IF ++L +TNG G+ R + +E+ + ++ Sbjct: 126 LAGIFDSVLENEAWLTNGSFGLNNVPRPGRAAM-------------GAIEWEVLYFIFVI 172 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + ++ L + + +R+N+ A L I KL++FA+ A G+AG Sbjct: 173 IVLVSVMIVLTRLTHSPFGRLLKGVRENEDAAKMLGKDITRVKLTSFAIGGAVAGLAGGL 232 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG--------------- 293 +A + F S + + ++LGG+ S S +LIG Sbjct: 233 YAHYIGSVVVQQFVPSVTFTIWAALLLGGVASNSGAIFGAFLLIGFQESTRFLSNIYDGL 292 Query: 294 ---VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + E+ L ++ + + VI + + Sbjct: 293 LAVLPEIIANTLRILIQPLPDHPSFVPSLRFVVIGVLIVCVIRYQPEGVFG 343 >gi|218529487|ref|YP_002420303.1| urea ABC transporter permease UrtC [Methylobacterium chloromethanicum CM4] gi|254560409|ref|YP_003067504.1| Branched-chain amino acid ABC transporter permease [Methylobacterium extorquens DM4] gi|218521790|gb|ACK82375.1| urea ABC transporter, permease protein UrtC [Methylobacterium chloromethanicum CM4] gi|254267687|emb|CAX23534.1| putative Branched-chain amino acid ABC transporter, permease protein [Methylobacterium extorquens DM4] Length = 373 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 93/341 (27%), Gaps = 30/341 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + A S ++ + IY M A +S+ G G+L+L IA+ + Sbjct: 15 AVYGLFFASIALIPAFVSDGFLLNQFAVYGIYGMLALSISLCWGFGGILNLGQGIAFGLA 74 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY + M++ + + + + LI+ +F + Sbjct: 75 AYGMAMTMQMQSQDPESNPIPPFMLNNSLEHLPWFWQPFWSTGGGILLALIVPTLFYVVF 134 Query: 138 IKWKPITNGKAGIYVAD----------------RLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + F + Y Sbjct: 135 GTLMFRARVSGPFFAIMSLAMLSAFATLILDMQPYTNGANGISPPAPLSMFGADIDPYGP 194 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 Y+++ G+ L ++ + +R + + L + + +A+S Sbjct: 195 AAYWIVCGLLIAVTVGAKLLTQSKFGLVVQALRGDPERVRFLGYNVALYETVIYAISGFI 254 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 +AG + +SP + +I ++ +GG SL ++ G Sbjct: 255 AALAGCLWVMLIQYVSPAQLDTTFSIGMVIWAGIGGRLSLLGAILGAFLIQGGQSYL--- 311 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F ++ +V+ L L Sbjct: 312 -----------GDQFLATWLLMLGAFFIVVVRFLPKGLAGL 341 >gi|328953530|ref|YP_004370864.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] gi|328453854|gb|AEB09683.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] Length = 287 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 99/305 (32%), Gaps = 25/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G +++ G LGL++ Y GA++ V+L S Y ++ ++ Sbjct: 6 ILNGLTAGSVYALIALGYTMIYGILGLINFAQGEIYMAGAFAAVLLLSAYQVNFFVACLF 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ G+ + + + + LI + +L + G Sbjct: 66 GMGVAVLVGVALERFAFRPLRGAHPLVPLISAIGASILLQSLALLLFGPE---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + F + + + F +++++R T A +Q Sbjct: 116 -DRSFPTHFEFAALDVAGASISTLQAAIFISALFFMILLMVFVRYTRFGKAIVATALDQD 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + SA G AG A + + + S +LGG+ Sbjct: 175 TARLMGINVDRMITLTFVIGSALSGAAGIMMAIYYN-ATYPRMGLLPGLKAFSAAVLGGV 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ IL L + + F L +V+L+R Sbjct: 234 GNIPGAIIGGLILGVAENLGAAYLSSGYKDAIAF-------------AILIVVLLVRPRG 280 Query: 339 LLRLR 343 LL R Sbjct: 281 LLGSR 285 >gi|197124774|ref|YP_002136725.1| inner-membrane translocator [Anaeromyxobacter sp. K] gi|196174623|gb|ACG75596.1| inner-membrane translocator [Anaeromyxobacter sp. K] Length = 352 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 110/337 (32%), Gaps = 27/337 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + +L + L L + S + + + + V+ A L++V G G S Sbjct: 1 MARARAVLRSVLPFAVGLPILLVFQAFSPPDYTLILVNVGVNVILAVSLNVVNGFTGQFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L A+GAY+ + + +P + + +L A Sbjct: 61 LGHAGFMAVGAYTAAKITLAFSGVQLAFLPAAV-------SDQLVFALALAASMATAAAA 113 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ ++ + G R + + Sbjct: 114 GFLVGMPSLRLRGDYLAIVTLGFGEIIRSLIENMKFLGQA-----TGLSGLPPYTNIAWV 168 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + L + A IR+++ A ++ K+ AF +SSA+ G+AG Sbjct: 169 GVSAIATVVMARRLAVSTQGRALFAIREDEVAAEAMGVDTTGYKVRAFVISSAYAGLAGG 228 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + +P MF F +I V+ +V+LGG+ S++ A +L +E Y Sbjct: 229 LIAHAILLTTPRMFTFVRSIEVVVMVVLGGLGSITGSVVAAVVLTVALEGLREFQQY--- 285 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L +++L+R + R Sbjct: 286 ------------RMVAYAAGLIVLMLLRPQGIFGTRE 310 >gi|116249108|ref|YP_764949.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253758|emb|CAK12152.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 379 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 98/354 (27%), Gaps = 42/354 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A + +F ++ + + L+Y M +++ G G+L+L + + +G Sbjct: 9 VAAYVLFIAVIFAAPVFGDEFWLNRISKYLVYGMLGVAIALTWGYAGILNLGQGLFFGLG 68 Query: 78 AYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 AY + +W P + L Sbjct: 69 AYMLAMSLKLSSLTSLQQGSDKPVPDFMLWNAEPGAPTELCCINKGSFLWLPFQSQSVGL 128 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVA----------------DRLYFLGTTVRSLI 167 + +++ + L + + L Sbjct: 129 VLGIVLPVVIAGALGMLVFRKRISGVFVSIITLALVLLVRLVVVDAQPVTNGFNGLTDLG 188 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 F Y YY+ L+ + T + IRD+ L + Sbjct: 189 WLTIGGIEFDPYSRATYYLCATCLSLTLIGARLIVETRAGMILQAIRDDHVRARYLGFDV 248 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 ++ F +S+ G+AG + + SP S ++ ++ +GG +SL Sbjct: 249 SLYQVFFFVISAGIAGVAGMLYVVVAEFASPTFMDLSFSVTMVVWAAVGGRSSLLGACIG 308 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + + + + ++ + LV+L L Sbjct: 309 AILINMIE------------AEVSETEALVEAWKAIIGLIFVLVVLFMPRGLGG 350 >gi|330809106|ref|YP_004353568.1| branched-chain amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377214|gb|AEA68564.1| putative branched-chain amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 354 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 132/320 (41%), Gaps = 16/320 (5%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVI 83 + F+ L + +++++ I L+ + GL+++ G G S+ A+GA+ +Y + Sbjct: 34 VAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFMAVGAFATYGL 93 Query: 84 LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 L GL + L + +I+G G++ G+PS + +G YL + TL + + K+ Sbjct: 94 LLRVPGLPLPLALLGGGVIAGLVGLLFGIPSSRIKGFYLMVTTLAAQFFLEWVFAKFPWF 153 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 N + ++ L + + Y + L L + + L R Sbjct: 154 YNYASSGTISAPRLELFGH-------------NLATPVGRYLLTLSCVVLLTWVAINLVR 200 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFK 262 + + W IRD A + + K AFAVSS ++G+AGA +A A S F Sbjct: 201 SQVGRNWMAIRDMDTAASVIGIAVERDKRMAFAVSSFYLGIAGALWAFAYLGTASAGSFD 260 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + ++ I+I+GGM S++ A + V L + FN + Sbjct: 261 INRSFQILFIIIIGGMGSIAGAFIGAAFISLVPILLSHAGQWLFNGNVDAG-QLQNLQKV 319 Query: 323 LMVIALFLVILMRSHSLLRL 342 L + ++ L RL Sbjct: 320 LFGGLIIWFLIKEPEGLARL 339 >gi|326775961|ref|ZP_08235226.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|326656294|gb|EGE41140.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 663 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 115/322 (35%), Gaps = 14/322 (4%) Query: 2 SIFSLRLNKYDKILCL--LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIV 59 S R+ + A + LL+ L Y S+ L + A ++I+ Sbjct: 314 SRVPARIGRLPGGAAWWRAAPLLVLLVVLISLPALLDAYSISLAGSALALGLLAVSVTIL 373 Query: 60 VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G GL +L +A+GAY+ L + + +SA+ + ++G ++ RG Sbjct: 374 TGYAGLPTLGQTAPFAVGAYATANLAEAGWTVGPVQLALSALAAAVFAAVVGPAVIRARG 433 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 + + TL + E+ ++ + + +T G G+ L + ++ Sbjct: 434 TTVLMITLAVGELTGAVVNQLRSVTGGADGLVGFPATRAL------------WGGEEMLE 481 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 E +Y L + ++ S+ L + R+ R + + + L A + Sbjct: 482 ESELYTYALVVAVVAVSVTLLVLRSPAGKLLTGTRGAEARMRASGHPVGRYLLVAHICAG 541 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A G+ G+ + ++P F + V++GG TS+ +++ + Sbjct: 542 ALAGVGGSLMVTVQQYLAPADVGFEIAAFALLAVVIGGTTSVIGALLGAGLIVATRDWVA 601 Query: 300 GMNFYYFNSLLKFDCSFNMRHT 321 G + LL + Sbjct: 602 GSWPGHGPLLLGVLFVATVYLL 623 Score = 40.2 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 77/272 (28%), Gaps = 13/272 (4%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 L+ + A GLS+ G+ G+L+L+ YAIGAY+ L + L + + Sbjct: 19 LLLFVVAAGLSLAFGTAGVLNLSHGTLYAIGAYTGAELSDGTWGGLALGLAAGTAAACLA 78 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 G + + L+ + + + Sbjct: 79 GAGLSAATAPLARRGHLAQALLTFGLALIGGDLLIQVFGADELPVRVPEALDSSVMLLGH 138 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 Y + ++ L+A L RT + A R D+ + + Sbjct: 139 R-----------YPAYRLCFIVMAVLLAAFGTWVLTRTRMGAAVRAAADDPQMLAATGRN 187 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 A + A G AG A +V+ ++ + SL Sbjct: 188 PRAVHTGVLAAAGALAGAAGVLGAPIIGPGPGTSENVLMLSLVVVVLGG--LRSLWATFF 245 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 A + V L + LL + + Sbjct: 246 AAIAVGEVQTLGVALAPDLAPYLLFAAMAAVL 277 >gi|262066270|ref|ZP_06025882.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Fusobacterium periodonticum ATCC 33693] gi|291380040|gb|EFE87558.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Fusobacterium periodonticum ATCC 33693] Length = 295 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 93/306 (30%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG---SRYGLSIWLL 95 I + IY + + G ++V G L++ IGAY + S GL +W+ Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYVSLFSIPALSSMGLPVWVS 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + +I G + + + + I+ LI + + Sbjct: 67 VIPAIIICAIVGCLAERIAYRPLRNSPRISNLITAIGVSLFIENVFMKIFTPNTRSFPKI 126 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + +L LS ++ L++++T A Sbjct: 127 FTQEPISF----------GNGINISFGAVVTILTTLVLSVALQLFMKKTKYGKAMIATSQ 176 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S +A + ++ +I P M I +L Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVASVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L F L +V+L + Sbjct: 236 GGIGILPGAVMGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282 Query: 336 SHSLLR 341 +L Sbjct: 283 PTGILG 288 >gi|326804268|ref|YP_004322086.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Aerococcus urinae ACS-120-V-Col10a] gi|326650481|gb|AEA00664.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Aerococcus urinae ACS-120-V-Col10a] Length = 292 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 94/289 (32%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +GL++ Y +GA+ L + G+ ++ + + Sbjct: 8 LINGVALGSIYALMALGYTMVYGIIGLINFAHGDIYMVGAFVGFTLITNVGMGVFPALIL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+I+ + K IA LI + +L G Sbjct: 68 AMLFTAVLGVIIERVAYKPLRGATRIAALITAIGVSMLLQNVMIFLRGPE---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + +L L ++ + +++T + A R + + Sbjct: 118 -VRAFPADLPDWSLQLGSFTINSQQILILAVTIILMIALQVIVQKTKLGQAMRAVSVDPD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + F + SA G AG + ISP M + ++GG+ Sbjct: 177 AAQLMGINANTIISFTFLIGSALAGAAGVLVGIYYNSISPLM-GVNIGTKTFVAAVVGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ I+ V + + + + + Sbjct: 236 GSIPGAVLGGLIIGIVETFVSMIGLSTWKDAAVYIILIIILLVKPTGLL 284 >gi|309802634|ref|ZP_07696738.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Bifidobacterium dentium JCVIHMP022] gi|308220698|gb|EFO77006.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Bifidobacterium dentium JCVIHMP022] Length = 308 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 99/304 (32%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G + L++ +G+Y ++ L + Sbjct: 12 IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYVLMLTI-----PFILACGL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A ++ +++ + ++ + G + Sbjct: 67 PAWLAVVPAILVCVAVGVIVEKAAYKPVREKGNNMTALITAIAMSLLLENGSQAIFGADY 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V ++I+ + + +L + ++ L++ T A R + ++++ Sbjct: 127 QT--VPTVIQIPTLALGGLKIDGATILTVLLGLVIMVALQLFVTYTKQGKAMRAVSEDKE 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +A + S ++S M + +LGG+ Sbjct: 185 ASILMGINVNSTITLTFAIGSGLAAVASLMYCVSYPQVS-PMMGAMLGLKAFVAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V L ++ S ++ L +V+L++ Sbjct: 244 GSIPGAMVGGLVIGVVESLTKAYIGTITAGVITSAFSDA-----IVFGILIIVLLVKPSG 298 Query: 339 LLRL 342 L+ Sbjct: 299 LMGE 302 >gi|257126943|ref|YP_003165057.1| inner-membrane translocator [Leptotrichia buccalis C-1013-b] gi|257050882|gb|ACV40066.1| inner-membrane translocator [Leptotrichia buccalis C-1013-b] Length = 298 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 110/302 (36%), Gaps = 20/302 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + IY + A G ++V G + L++ +GAY+ ++ G+ + + I +S Sbjct: 10 INGLQTGSIYALIALGYTMVYGIVKLINFAHGDILMVGAYAT-LIAVSNGMPLIVAIILS 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ G+++ + + + I+ LI + +L I G ++ Sbjct: 69 IVLCAILGVVIDFFAYRPIRNAPKISALITAIGMSFLLESLALIIFGAN-----PKVIDQ 123 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 L + F+ + +V++ ++ L++++T + A R + + A Sbjct: 124 KYIPAFLSNNNKINLGFLSISMLTIFVIVVTSICMIALNLFIKKTKLGKATRAVSQDTGA 183 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + FA+ S + GA +A +I P M + + GG+ Sbjct: 184 AQLMGINVNKTIAITFAIGSGLGALGGALYAIVYPQIEPYM-GMLPGLKAFIAAVFGGIG 242 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ +L + G + + + + F L L+++ R + L Sbjct: 243 SIPGAMVGGYVLGLLEAYVKGSSLTTWANPIVFG-------------VLILILIFRPNGL 289 Query: 340 LR 341 Sbjct: 290 FG 291 >gi|167570934|ref|ZP_02363808.1| putative amino acid ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 361 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 96/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 18 IAVGVGVPLAALVAPESSAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 77 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 78 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTGYLAYALALVVLVPA 137 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 138 AVAWVFGFFTFRSRVKGVYLSIITQAATFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 197 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ + S + + + IRD + L + + KL + Sbjct: 198 SPGTRTVLFLMTFATLVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 257 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 258 VVSAVLCGIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 317 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 318 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 350 >gi|220920270|ref|YP_002495571.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219944876|gb|ACL55268.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 441 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 124/336 (36%), Gaps = 32/336 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ + + + + + +M + I V+FA ++++G GLLS Sbjct: 29 SRLGAVAPWLAASAILVAAPHVFTSGASLTMMSLMGIMVVFALSYNMLLGQTGLLSFGHA 88 Query: 72 IAYAIGAY-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + Y +GA+ V+ +R + + + V A+ A G + G S + G A+ + Sbjct: 89 VYYGLGAFFTVHAMNVVAAARLPVPLVAMPLVGAVAGLAFGFLFGTVSTRRAGTVFAMIS 148 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++E+ + G+ G+ + + R +I +YY+ Sbjct: 149 LGLAELVTSGSHILHSFFGGEEGVT------------TNRTKMLRLFDLSFGPQIQVYYL 196 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + G C + A ++ + RT + +R+N + + +L AF +S+ F G+AG Sbjct: 197 IAGWCLVCALLMYGITRTPLGRLCNAVRENPERVEFIGYEPQLVRLVAFCLSALFAGVAG 256 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A A + + ++ ++ +V+ +GG+ ++ + + + Sbjct: 257 ALAAINFEIVNSSYLGLQQSGVVLLAAFIGGIGHFVGPVIGAVLVTILQVSLSDLTEVW- 315 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + +++ + L Sbjct: 316 --------------QLYFGLLFIAIVMFAPGGIAGL 337 >gi|153951345|ref|YP_001397904.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. doylei 269.97] gi|152938791|gb|ABS43532.1| high affinity branched-chain amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. doylei 269.97] Length = 298 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 94/303 (31%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GAY+ + + + + + Sbjct: 10 LVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+ + K I+ LI + L + A Sbjct: 70 AMIFAACVGIATDRIAYKPLRQTPRISLLITAIGISFFLQNLFNMLFTSTPRTFAPP--- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 VI V + +++ L ++ A R + + + Sbjct: 127 -------SYFEESVNFGGVITTYGSLMVPALTFVILITVLWILYKSKYGIAIRALAFDIQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ SA + G F+AA+ + P M + + +LGG+ Sbjct: 180 TVNLMGIDANRMIAVVFALGSALAAVGGVFWAANYYSVEPTMGTLI-GLKAFAAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + F + I L ++L R Sbjct: 239 GSVVGAVLGGLIIGFTEVVV-----------VAFFPDLSGFKDAFAFIFLVFILLFRPTG 287 Query: 339 LLR 341 +L Sbjct: 288 ILG 290 >gi|91978325|ref|YP_570984.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91684781|gb|ABE41083.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 383 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 94/328 (28%), Gaps = 36/328 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + ++ + L Y A GL + G G+LSL + + +G Y + S+ Sbjct: 31 DVFRLNLVAKYLTYAFVALGLVLCWGFGGILSLGQGVFFGLGGYGMAMYLKLEASSVANT 90 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---------------------- 133 S + L TL + I Sbjct: 91 KIQSTPGIPDFMDWNQITQLPLFWQPFHSLTLTILAILIVPTLFAYLVGAAMFKRRVGGV 150 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 +I I + L + ++ +Y+V + F Sbjct: 151 YFAIITQAIAAILTILIIGQQGYTGGINGITDLRTLKGWDIRPDHTKVILYFVEVAFLFG 210 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + L++R + +R+ + ++ K+ AF +++ F + GA F + Sbjct: 211 CILLALFVRHAKLGRILVAMREKEDRVRFSGYSVANFKIFAFCLAAMFAAIGGAMFTLNV 270 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG S+ T ++ Sbjct: 271 GFMSPSFVGIVPSIEMVIYTAVGGRMSIFGAIYGTLLVNFAKTSLSE------------- 317 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 SF + V+L+ + L Sbjct: 318 -SFPQLWLFGLGALFIAVVLIFPNGLAG 344 >gi|73541670|ref|YP_296190.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72119083|gb|AAZ61346.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 358 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 114/310 (36%), Gaps = 7/310 (2%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V +L +M +I I+V+ +++G G++S + + Sbjct: 14 LLGAMLVLIVLALACAPFVFPGARALNMAAKICIFVVLVGSYDLLLGYTGIVSFAHTMFF 73 Query: 75 AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IG Y I SR ++ + +S ++GL SL+ R + A+ TL ++ Sbjct: 74 GIGGYGVAIAMSRMEPGWGALLAGTVAALAVSAVLAFLIGLFSLRVRAIFFAMITLAVAT 133 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F ++ + T G+ G+ +F P + ++ YY++ Sbjct: 134 AFATLISQLSEWTGGEDGLTFKVPEALRPGFSLGDAEWFGAPLNG---KLLSYYLVFAGA 190 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L ++L + + + IR+N ++ + + + +S+ F MAG A Sbjct: 191 VLLFLLLLRIVNSPFGRVLQAIRENDFRAEAIGYRTVVYRTVSTVLSAIFATMAGVLMAI 250 Query: 252 SRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 F + ++ IV++GGM +L T + + + ++ + Sbjct: 251 WLRYNGPDTSLSFEIMVDILLIVVIGGMGTLYGAVIGTTLFLLAQTYLQDVMKLASDATV 310 Query: 311 KFDCSFNMRH 320 + H Sbjct: 311 SVPLLAGLLH 320 >gi|262038960|ref|ZP_06012298.1| high-affinity branched-chain amino acid transport system permease protein BraD [Leptotrichia goodfellowii F0264] gi|261747014|gb|EEY34515.1| high-affinity branched-chain amino acid transport system permease protein BraD [Leptotrichia goodfellowii F0264] Length = 298 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 103/302 (34%), Gaps = 20/302 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + IY + A G ++V G + L++ +GAY+ ++ G+ L + +S Sbjct: 10 INGLQTGSIYALIALGYTMVYGIVKLINFAHGDILMVGAYA-ALVAVSNGMPFSLALILS 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + G+++ + + + I+ LI + +L + G ++ Sbjct: 69 IVFCSILGVVIDYFAYRPLRNSPRISALITAIGMSFMLESLALVIFGAT-----PKVINT 123 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 L + F+ + +V++ + L+++ T + A R + + A Sbjct: 124 NLLPVFLSPKVKINLGFISVSMLTIFVIIVTLICMLVLNLFIKNTKLGKATRAVSQDTGA 183 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + FA+ S + G +A I P M + + GG+ Sbjct: 184 AKLMGINVNLTIAITFAIGSGLGALGGVMYAIMYPTIEPYM-GMLPGLKAFIAAVFGGIG 242 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ +L + G + + + F L L+++ + + L Sbjct: 243 SIPGAMVGGYVLGIIESYTKGYISSTWANPIVFG-------------VLILILIFKPNGL 289 Query: 340 LR 341 Sbjct: 290 FG 291 >gi|237739396|ref|ZP_04569877.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. 2_1_31] gi|229423004|gb|EEO38051.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. 2_1_31] Length = 295 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 92/306 (30%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG---SRYGLSIWLL 95 I + IY + + G ++V G L++ IGAY + S GL +W+ Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYVSLFSIPTLSSMGLPVWVS 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + +I G + + + + I+ LI + L Sbjct: 67 VIPAIIICAIVGCLTERIAYRPLRNSPRISNLITAIGVSLFLENVFMKVFTPNTRSFPKI 126 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + ++ LS ++ L++++T A Sbjct: 127 FIQDSIKL----------GDSIQISFGAVVTIVVTVILSIALQLFMKKTKYGKAMIATSQ 176 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S +A + ++ +I P M I +L Sbjct: 177 DYAASALVGINVDRTIQLTFAIGSGLAAVAAVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L F L +V+L + Sbjct: 236 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282 Query: 336 SHSLLR 341 +L Sbjct: 283 PTGILG 288 >gi|161520173|ref|YP_001583600.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189353648|ref|YP_001949275.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221200420|ref|ZP_03573462.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221206100|ref|ZP_03579114.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221209453|ref|ZP_03582434.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|160344223|gb|ABX17308.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189337670|dbj|BAG46739.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221170141|gb|EEE02607.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221174112|gb|EEE06545.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221179761|gb|EEE12166.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 308 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 101/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G S+V G +G+++ Y IGAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVSAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++GA G + + + + LI + L + I G Sbjct: 72 VLGAALIVSVIVTGAYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++ L ++ L++ + + A Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDFDVTVPYARLLIVGVTIVLMIALTLFISHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + + + G + +++P F I Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L G + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|295696000|ref|YP_003589238.1| inner-membrane translocator [Bacillus tusciae DSM 2912] gi|295411602|gb|ADG06094.1| inner-membrane translocator [Bacillus tusciae DSM 2912] Length = 321 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 88/306 (28%), Gaps = 9/306 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y A G ++V G L L++ + GA+ + + L Sbjct: 15 LVDGITLGAVYATVALGYTMVYGILELINFAHGEIFMTGAFIGTAVLMGLNAAGVLAAIP 74 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW---KPITNGKAGIYVADR 155 + + +A + + + I + ++A+ Sbjct: 75 KGAALLVALAAAMVITGLLGVGIERVAYRPLRKAPRLIPLISAIGVSFVLQDVVRFIAEW 134 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + V + VL + A + L+++RT A R + Sbjct: 135 RTGNYIVTGISLFDSEISFGPVTVKTNALIVLGAAIVMMAGLDLFVQRTKWGTAMRAVAQ 194 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ ++ + F V SA G G FA I P F + + +L Sbjct: 195 DKDTAALMSIDVNKVIALTFFVGSALGGATGVLFAQQYGTIDPY-IGFILGLKAFTAAVL 253 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ +L + +L+ + L V+L + Sbjct: 254 GGIGNIRGAMFGGFVLGILEMFASAELSVLTGGVLR-----AEYKDVFAFLILIAVLLFK 308 Query: 336 SHSLLR 341 L Sbjct: 309 PEGLFG 314 >gi|144901055|emb|CAM77919.1| Permease of ABC transporter [Magnetospirillum gryphiswaldense MSR-1] Length = 369 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 108/347 (31%), Gaps = 33/347 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L LL + LL A Y+ ++ + L Y + A +++V G G+LSL + Sbjct: 22 LFLLVIPGLNLLVPVESALHVPNYMVTLIGKYLCYAILAMAMNLVWGYCGVLSLGHGAFF 81 Query: 75 AIGAYSYVILGS-------------------RYGLSIWLLIPVSAMISGACGMIMGLPSL 115 A+G Y+ + + +++ + Sbjct: 82 ALGGYAMGMYMMRAIGTRGSYGNAELPDFMVFLNWKELPWFWMGFDNFAFALLMVMVIPG 141 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + +A ++ + + + + F S Sbjct: 142 VLAFVFGWLAFRSRINGVYLSIVTQAMTYALMLAFFRNEMGFGGNNGLTDFKDILGFDLS 201 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ +Y++ + + ++ ++ + + +RD + L ++ KL AF Sbjct: 202 QSSTKLGLYWLTALLLGATFLVVRFIAASKLGRVMMAVRDAESRVRFLGYSVTGVKLFAF 261 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P F + +I + V +GG +L + G Sbjct: 262 TVSAVLAGIAGALYVPQVGIINPSEFSPANSIEIAIWVAVGGRGTLLGPVLGAFAVNGAK 321 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G + + +V L L+ L Sbjct: 322 TWLTG--------------AAPELWLFALGALFIIVTLALPKGLVGL 354 >gi|330809452|ref|YP_004353914.1| branched-chain amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377560|gb|AEA68910.1| putative branched-chain amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 355 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 131/335 (39%), Gaps = 16/335 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V L F+ + + + ++ I L+ + GL+++ G G LSL A+GA Sbjct: 29 LVALLLFAFVVVPWLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGA 88 Query: 79 YSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 ++ + GL + + I + + + ++ GLPSL+ +G YL ++TL L Sbjct: 89 FATYNLEVRVAGLPLLVSIALGGLAAALVAVLFGLPSLRIKGFYLLVSTLAAQFFVTWAL 148 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 ++ +N A ++ + Y + L + + Sbjct: 149 TRFSWFSNNSASGVISAPRLE-------------VLGVNLDAPAGRYLLTLSVVVALFWL 195 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRI 256 L R+ + W +RD A + + KL AFA+S F+G+AGA +A A + Sbjct: 196 GKNLVRSELGRNWMAVRDMDTAAAVIGIALAKTKLLAFAISGFFLGVAGALWAFAYLGTV 255 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P F + + ++ I+I+GG+ SL A ++ L + L+ Sbjct: 256 EPHGFDLNRSFQILFIIIIGGLGSLLGNFLGAAFIVLFPVLLSNLVSLLPGGLVDAGQVE 315 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 N++ + + L ++ L RL R Sbjct: 316 NLQKM-IFGALIILFLIKEPEGLARLWQRFRQRAR 349 >gi|295111648|emb|CBL28398.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Synergistetes bacterium SGP1] Length = 358 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 74/332 (22%), Positives = 130/332 (39%), Gaps = 23/332 (6%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + + + + M + + Y++ A L++VVG LG LSL Sbjct: 14 ARRIFATYAVVTAAYGFMQILSATGLLSSTMRGMLVPVCAYMVMAIALNLVVGILGELSL 73 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIW-------LLIPVSAMISGACGMIMGLPSLKFRGDY 121 ++GA++ V I + + V + + A G ++G+P L+ +GDY Sbjct: 74 GHAGFMSVGAFTGVASAIMLQNLIPFAPARLAVAMLVGSGFAAAAGFLIGIPVLRLKGDY 133 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI +++ + + GI + + I +I Sbjct: 134 LAIVTLAFGEIIKSVFNNF-YLGMDSGGISFSMLSDKTRLLPGGRLIIAGPMGIGGIQKI 192 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + V + ++ +++ L + A+ IRD A S+ I K+ AF S+A Sbjct: 193 STFTVGFILVMIALAVMYNLMNSRAGRAFMAIRDVCIAAESVGINITRYKMMAFVTSAAL 252 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G AGA FA + I + F F+ +I+V+ V+LGG ++ A A L + E Sbjct: 253 AGAAGALFAMNYSTIVANKFDFNTSILVLVFVVLGGQGNILGSIVAAAALTILPEKLRQF 312 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 Y L + L V+L Sbjct: 313 ADY---------------RMLLYAVVLIAVML 329 >gi|288960267|ref|YP_003450607.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288912575|dbj|BAI74063.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 339 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 58/321 (18%), Positives = 115/321 (35%), Gaps = 19/321 (5%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + +Y+ S+ +L + ++++G GLLSL + +GAY L +G+ Sbjct: 31 PFVADRYLLSVLTTVLWFAYVGQAWNVMMGFSGLLSLGHALYVGLGAYVSAALFVHFGIG 90 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 W + ++ +++ A G ++G +F + A L+ + G Sbjct: 91 PWAGMLLAMLVAVAAGCVIGFLGFRFGVKGVHFA-----------LLTIAFAEVARIGFD 139 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + G + P + + YYV L + + + L + + W Sbjct: 140 HITWVGGSGGFFLPVEAGASDPLNLRGSPVLFYYVALALVVGALLLSRALLHSRLGYQWL 199 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVI 270 +R+ A + + A+++A AVSSA + G F A + + P+ F +I +I Sbjct: 200 AVREEPDAAEASGVDLFRARMAAVAVSSALTALGGVFQAFYFNNLFPEQVFSMGRSIEII 259 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 I+GG+ +L IL + E + AL Sbjct: 260 LPAIVGGIGTLVGPILGAFILTPLGEALTFLIEAG-------GLDLPGLKQLFYGAALVA 312 Query: 331 VILMRSHSLLRLRTPSNFLER 351 +++ R + L R Sbjct: 313 IVVFRPEGVWPWLARRLRLVR 333 >gi|241663904|ref|YP_002982264.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|309781506|ref|ZP_07676242.1| branched-chain amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|240865931|gb|ACS63592.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|308919919|gb|EFP65580.1| branched-chain amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 311 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 98/305 (32%), Gaps = 6/305 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G LG+++ +GA S + + L Sbjct: 8 IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMVGAMSALTAINFLQKYFPNLPDW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + + + + +A L + ++ + + Sbjct: 68 LTLVFALLFAMPVCAIVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L S+ ++L + +IL + RT + A R +NQ+ Sbjct: 128 LTFPQLLPSNPIDIGSTGATITGKEIVIILVSILVMVGLILLVNRTKLGRAMRATAENQR 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + F + +A +AG A + M F + + +LGG+ Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + L G + + I L V+L R Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLIGVLLFRPSG 301 Query: 339 LLRLR 343 ++ R Sbjct: 302 IMGER 306 >gi|283833175|ref|ZP_06352916.1| urea ABC transporter, permease protein UrtC [Citrobacter youngae ATCC 29220] gi|291070806|gb|EFE08915.1| urea ABC transporter, permease protein UrtC [Citrobacter youngae ATCC 29220] Length = 357 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 97/331 (29%), Gaps = 27/331 (8%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L + ++ +IL Y + A L +V G G+LSL I +A+G Y+ + Sbjct: 35 ALLPADHPLAISVWTLTLAGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMGMY 94 Query: 85 -------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 S + +++ L + A + Sbjct: 95 LMRQASGEGLPAFMSFLSWTELPWFWWGTQHFIWAMLLVVLVPGLLALVFGWFAFRSKIK 154 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 ++ G + + + FP + I ++ + + Sbjct: 155 GVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTGFTTILGFPVTATSTRIALFLATVMLL 214 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ + L L R+ +RD + KL + +S+ G+AGA + Sbjct: 215 VLALWLGLALARSKFGRILTAVRDAENRLMFCGYDPKGFKLLVWTLSAVLCGLAGALYVP 274 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 I+P + +I V LGG +L ++ G L Sbjct: 275 QVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVFGAVLVNGAKSL-------------- 320 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + V L ++ L Sbjct: 321 FTVIMPEYWQLFLGLIFIGVTLFLPRGVIGL 351 >gi|146305735|ref|YP_001186200.1| inner-membrane translocator [Pseudomonas mendocina ymp] gi|145573936|gb|ABP83468.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Pseudomonas mendocina ymp] Length = 522 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 91/296 (30%), Gaps = 33/296 (11%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--------SIWLLIPVSAMISGACGMI 109 I G LG++++ +GAY+ ++ + +P++ +++ GM Sbjct: 249 ITFGLLGVINMAHGEMLMLGAYTTYVVQLSFQRLAPEYLTLYPLAALPIAFLVTACIGMA 308 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + ++ L+ + ILI+ +T G + VA+ + Sbjct: 309 LERTVIRHLYGRPLET-LLATWGISLILIQLVRVTFGAQNVEVANPA---------WLSG 358 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 ++ ++ F+ A L L +T + R + N+ Sbjct: 359 GVQVLPNLVLPYNRIVIIGFALFVVALTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGR 418 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + AF + S G+ G A S+ S I +V+LGG+ L+ A Sbjct: 419 VDMLAFGLGSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVLAAF 476 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L V + +L R L L+ Sbjct: 477 GLGVVNKFLEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 519 >gi|330890086|gb|EGH22747.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 355 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 132/328 (40%), Gaps = 16/328 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + F+ + + + ++ I L+ + GL+++ G G LSL A+ Sbjct: 27 IGLWSLLVFAFIAVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ + G+ + L + ++S ++ GLPSL+ +G YL ++TL + + Sbjct: 87 GAFAAYNLQLRVPGMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L ++ TN A + Y + LG+ L Sbjct: 147 VLTRFSWFTNDNASGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLF 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + L R + W +RD A + + AKL AFA+S ++G+AG+ +A A Sbjct: 194 WLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F + + ++ I+I+GG+ + A ++ L ++ L+ Sbjct: 254 TVEPHGFDLNRSFQILFIIIIGGLGGVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQ 313 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 N++ L + ++ L RL Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARL 340 >gi|297618503|ref|YP_003703662.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM 12680] gi|297146340|gb|ADI03097.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM 12680] Length = 295 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 102/303 (33%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ +GA+ + G ++ + + Sbjct: 8 LVNGISLGSIYALIALGYTMVYGIINLINFAHGDVMMVGAFIGFFSITALGTGVFPAMVM 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G+++ + K + IA LI + L + Sbjct: 68 AMACCAVLGVVIEKLAYKPLRNSTRIAALITAIGVSLFLEYGTIWLLTPQQRSFPAGTF- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R+F F S+ ++ +VL+ L + ++RT I A R + NQ+ Sbjct: 127 -------PERYFYFFSNKLVITNRDVFVLVSAVILMLFLQYIVKRTKIGKAMRAVSQNQE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG + I P M + +LGG+ Sbjct: 180 AAMLMGIDVDKTISFTFAIGSALAAAAGVMVGVYYNTIDPLM-GIVPGLKAFVAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + ++ + L G + + F L +++L++ Sbjct: 239 GIIPGAMVGGFLMGVLESLVSGYGSSLYRDAVAF-------------AVLIIILLVKPAG 285 Query: 339 LLR 341 + Sbjct: 286 IFG 288 >gi|167846942|ref|ZP_02472450.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei B7210] Length = 391 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 48 IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 107 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 108 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 167 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 168 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 227 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + S + + + IRD + L + + KL + Sbjct: 228 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 287 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ +AGA + I+P +I + V +GG +L + G Sbjct: 288 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 347 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 348 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 380 >gi|113868229|ref|YP_726718.1| ABC-type transporter, permease component [Ralstonia eutropha H16] gi|113527005|emb|CAJ93350.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 358 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 119/336 (35%), Gaps = 11/336 (3%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ L +M +I I+V+ +++G G++S + + Sbjct: 14 VLTVILLVILAALACAPFAFPGARALNMAAKICIFVVLVASYDLLLGYTGIVSFAHTMFF 73 Query: 75 AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IG Y I SR ++ + +S ++GL SL+ R + A+ TL ++ Sbjct: 74 GIGGYGVAIAMSRMEPGWGALLAGTVGALAVSALLAFLIGLFSLRVRAIFFAMITLAVAT 133 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F ++ + T G+ G+ + P S ++ YY++ Sbjct: 134 AFATLVSQLSEWTGGEDGLTFKVPEVLRPGFTLGEAEWLGVPLSG---KLLSYYLVFAGA 190 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + ++L + + + IR+N ++ + + + +S+ F +AG A Sbjct: 191 VVLFLVLLRIVNSPFGRVLQAIRENDFRAEAIGYRTVVYRTVSTVLSAMFATLAGVLMAI 250 Query: 252 SRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM----NFYYF 306 PD F + ++ IV++GGM +L T + + + + Sbjct: 251 WLRYNGPDTSLSFEIMVDILLIVVIGGMGTLYGAVIGTVLFLVAQTYLQDVMKLASEATA 310 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L R + + L + ++ Sbjct: 311 ALPLLSSLLHPDRWLLWLGLLFILSVYYFPQGVVGR 346 >gi|126451529|ref|YP_001067343.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|242315237|ref|ZP_04814253.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254191793|ref|ZP_04898296.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254298938|ref|ZP_04966388.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|126225171|gb|ABN88711.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|157809237|gb|EDO86407.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157939464|gb|EDO95134.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|242138476|gb|EES24878.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1106b] Length = 400 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 57 IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 116 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 117 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 176 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 177 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 236 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + S + + + IRD + L + + KL + Sbjct: 237 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 296 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ +AGA + I+P +I + V +GG +L + G Sbjct: 297 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 356 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 357 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 389 >gi|107103959|ref|ZP_01367877.1| hypothetical protein PaerPA_01005031 [Pseudomonas aeruginosa PACS2] Length = 359 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 90/304 (29%), Gaps = 13/304 (4%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS- 86 A Y ++ +IL YV+ A L +V G GLLSL + +A+G Y+ + Sbjct: 39 PADSALHLSAYSLTLTGKILCYVIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMR 98 Query: 87 ---------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 W +P + + L L A + + Sbjct: 99 QASGDSLPAFMTFLSWNELPWYWAGTQHFLWALCLVVLVPGALAFAFGYFAFRSRIRGVY 158 Query: 138 IKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 AG+ + R + FP + ++ + + S Sbjct: 159 FSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGTRAALFLATVALLAAS 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L R+ +RD + KL + +S+ G+AGA F Sbjct: 219 LLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQVG 278 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I+P + +I V LGG +L ++ G Y+ L Sbjct: 279 IINPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFLGALF 338 Query: 315 SFNM 318 Sbjct: 339 IVVT 342 >gi|227511441|ref|ZP_03941490.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus buchneri ATCC 11577] gi|227523643|ref|ZP_03953692.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus hilgardii ATCC 8290] gi|227085392|gb|EEI20704.1| branched-chain amino acid ABC transporter, permease protein [Lactobacillus buchneri ATCC 11577] gi|227089215|gb|EEI24527.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus hilgardii ATCC 8290] Length = 299 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 103/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G + L++ Y +GA+ + + + + + Sbjct: 15 IINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYVINVWHFNFISALLS 74 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+I+ + + IA LI + +L Sbjct: 75 AMVVGAVSGVIIEYFAYRPLRHSPRIAALITAIGVSFLLENGMSYLFSSN---------- 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I+ + V+ +L+ C L + + +++T + A R + + Sbjct: 125 -TRDFPQIIKQVNYNIGGVLISNIQVLILVTACILMILLQVIIKKTKMGRAMRAVSVDPD 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I + FA+ SA G AG + I P M + I +LGG+ Sbjct: 184 AAELVGININWTISFTFALGSALAGAAGVLIGLYYNSIDPLM-GMTPGIKAFVAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + ++ + + + ++ L +++L+ Sbjct: 243 GSVPGASVGGFLIGILETFFQSIG-------------LSAYKDAVVYFVLIVILLIMPAG 289 Query: 339 LLR 341 + Sbjct: 290 IFG 292 >gi|317401548|gb|EFV82177.1| inner-membrane translocator [Achromobacter xylosoxidans C54] Length = 355 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 127/358 (35%), Gaps = 11/358 (3%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M I L + L + +V +L ++ +IL++V+ +++ Sbjct: 1 MPIRLLSGDPPRSTLLAVMLVAIVLTLAAAPFLFPGPKSLAVAAKILVFVILVASYDLLL 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP---VSAMISGACGMIMGLPSLKF 117 G G++S + + IGAY I R ++ +S +I+GL SL+ Sbjct: 61 GYTGIVSFAHTMFFGIGAYGVAIASVRMEAGWLAVLTGTAAGLAVSLVFALIIGLASLRV 120 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 R + A+ TL ++ FQ ++ + +T G+ G+ F Sbjct: 121 RAIFYAMITLAVAAAFQTLVSQLSDLTGGEDGLNFKVPQALRPAFRPLSEPLFGVTVDG- 179 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I YY++ C + ++L + + + IR+N ++ + + + + Sbjct: 180 --RIITYYLIAAACVVLFLMLLRIVNSPFGRVLQAIRENPFRAEAIGYRTVLYRSLSNLL 237 Query: 238 SSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 ++AF +AGA +A PD F + ++ +V++GGM ++ ++ + Sbjct: 238 AAAFATLAGALYALWLRYNGPDTSLSFEIMLNILLMVVIGGMGTMYGAVIGASLFVFAQS 297 Query: 297 LCCG----MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + R + I L + + Sbjct: 298 YLQDGLHVIHDAVGSIAPLALLFEPDRWLLWLGILFVLSVYYFPTGVAGRLREVARRR 355 >gi|83595056|ref|YP_428808.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] gi|83577970|gb|ABC24521.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] Length = 334 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 122/340 (35%), Gaps = 9/340 (2%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +++ +L L L + Y + I I V+ + + G G+ SL V Sbjct: 3 RRLVLMLGGACLLALAGWGLPMVVSDYGQRLLIMGCISVILVASMGLANGFTGVFSLGQV 62 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 AIGAY IL L + A ++G + L + Sbjct: 63 GFVAIGAYVSGILSLSVADKAAYLPDLPAFLAG--------VQMGTVPATLLAGAVCAGV 114 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 L + + + + + V + + + V L Sbjct: 115 AVIVGLPLMRLSGHHVSVATMGFMIIVNSVIVNAESFTRGARTFTGVPTDITLPVALIWM 174 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ +++ L + I A R++R++ A ++ +++ +L AF V + F G+ G+ + Sbjct: 175 VITLALLGRLIYSPIGLALRSVREDTIAAQAVGLSVLKTRLLAFTVGAFFAGVGGSLYGH 234 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 S F F + +I +++LGGM SLS ++ + E+ + + Sbjct: 235 YLGSFSAQTFFFPLMVSLIIMLVLGGMGSLSGAVVGVVVVTALSEILRNLERGMDLGFVV 294 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 F ++ + LV++ R LL R ++F + Sbjct: 295 VPPLFGASQ-VVLGLLFILVMIYRPRGLLEDRELTSFGRK 333 >gi|329940865|ref|ZP_08290145.1| branched chain amino acid transport permease [Streptomyces griseoaurantiacus M045] gi|329300159|gb|EGG44057.1| branched chain amino acid transport permease [Streptomyces griseoaurantiacus M045] Length = 309 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 96/307 (31%), Gaps = 12/307 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLI 96 + + +Y + A G ++V G + L++ + G + V + S+WL + Sbjct: 8 LANGLFLGSMYGLIAIGYTMVYGIVQLINFAHGEIFMTGGFGALSVYIWLPGNTSMWLAL 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P+ +++ + + +F L A + LI ++ Sbjct: 68 PLMLAGGAVVAVLVAVGAERFAYRPLRGAPRLAP------LITAIGLSLALQQAVFNWYP 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 V + F + V + ++++ ++ ++R + A + + Sbjct: 122 DAKTDRVFPQLPFGPYHIGSVRIQSGDIFLVVAAILCMTALAFFVRLSRTGRAMQATAQD 181 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + AFA+ F +AG + + F + + +LG Sbjct: 182 PDTAQLMGIDTNRIIVIAFAIGGLFAAVAGVAYGLKYGSV-KYDMGFQAGLKAFTAAVLG 240 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ +L + + +++I + L R Sbjct: 241 GIGNIYGAMLGGLVLGVAEAMATAYIADIPGMEQLGGQGWASVWAFVLLILVLL---FRP 297 Query: 337 HSLLRLR 343 LL R Sbjct: 298 QGLLGER 304 >gi|170025096|ref|YP_001721601.1| urea ABC transporter permease UrtB [Yersinia pseudotuberculosis YPIII] gi|169751630|gb|ACA69148.1| urea ABC transporter, permease protein UrtB [Yersinia pseudotuberculosis YPIII] Length = 533 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 82/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ S + + + +I+ + Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQFAPHWLALYPLIALPVAFFITAGIGMA 319 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ + L + + + Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQGVRMLFGPQNLEVANPAWLSGGVQVLPNL 377 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 378 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 437 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L + ++ Sbjct: 438 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 496 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530 >gi|86748785|ref|YP_485281.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86571813|gb|ABD06370.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 637 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 119/310 (38%), Gaps = 33/310 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y+ S+G +IL++V+FA L ++ GL S + +GAY G Sbjct: 325 PLVAGNYLLSVGAEILVFVLFAASLHFMMTVGGLASFGHAAFFGLGAYGAAFAVKFLGAP 384 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + V + ++ G ++ G Y A+ TL ++I +I +W +T G GI Sbjct: 385 MEVALLVGPLFGLLGAVVSGWFCVRLSGVYFAMLTLAFAQIIWSIAFQWVEVTGGDNGIL 444 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +PS++ +++ LG+ +++ L + R Sbjct: 445 GI------------------WPSAWASTPQGFFWLTLGVVVAGVALLRMLVFSPFGFGLR 486 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 RDN ++ + +A V+ F G+AGA FA + + P+ ++ + Sbjct: 487 ATRDNTLRSEAIGIDRKSVQWAALIVAGTFAGVAGALFAFLKGSVFPESLAIPISVDGLV 546 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V+LGG+ ++S + + S ++ + L+ Sbjct: 547 MVLLGGIETVSGAVVGAIVYKALAIWL---------------MSQTDLSKLVLGAIIVLL 591 Query: 332 ILMRSHSLLR 341 ++ ++ Sbjct: 592 VVAAPKGIVG 601 Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 93/308 (30%), Gaps = 28/308 (9%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--IWLLIP 97 S + A GLSI+ G +++ Y +GAY L R+ W + Sbjct: 9 LSGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAFTLTDRFSGPLGFWGGLL 68 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 +++I G +M + L+ + L+ + ++ + G + Sbjct: 69 AASLIVAVLGALMEMVLLRRIYHAPELFQLLATFGVTLMVQDIVVLIWGADDLMGPRAPG 128 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 F G F + + +++ + ++ L RT R ++ Sbjct: 129 FAGA----------FSLFGRLVPTYDILLIVLGPVVLGALWLLFHRTRWGVLVRAATQDR 178 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 L + S FA+ + GA + V+ ++ Sbjct: 179 DMVACLGVNQKWLFTSVFALGCFLAALGGALQIPRTTVTHYMDLSIIVEVFVVVVIGG-- 236 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S++ A ++ + L + + + +V+++R + Sbjct: 237 LGSVTGAFIAAVLVSELNALGI--------------LVLPKISLIAVFLVMAVVLVVRPY 282 Query: 338 SLLRLRTP 345 LL Sbjct: 283 GLLGKAER 290 >gi|70734142|ref|YP_257782.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348441|gb|AAY96047.1| probable permease of ABC transporter PA4859 [Pseudomonas fluorescens Pf-5] Length = 538 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 85/295 (28%), Gaps = 31/295 (10%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK- 116 I G LG++++ +GAY+ ++ + I +++ + Sbjct: 265 ITFGLLGVINMAHGEMLMLGAYATYVVQLLFQRYAPQAIEYYPLLALPVAFFVTAGIGMA 324 Query: 117 -----FRGDYLAIA-TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 R Y TL+ + +LI+ + G + VA+ + Sbjct: 325 LERTVIRHLYGRPLETLLATWGISLMLIQLVRLLFGAQNVEVANPA---------WLSGG 375 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 ++ ++ F+ L L +T + R + N+ Sbjct: 376 IQVLPNLVLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRV 435 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 + AF + S G+ G A S+ S I +V+LGG+ L+ A Sbjct: 436 DMLAFGLGSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVLAAFG 493 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ +L R L L+ Sbjct: 494 LGVANKILEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 535 >gi|319794640|ref|YP_004156280.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315597103|gb|ADU38169.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 328 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 126/302 (41%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G GLLS AY +GL+ L + + Sbjct: 30 FVMKLMCFALFAAAFNLLLGFTGLLSFGHAAFLGGSAYVAGHAIKVWGLTPELGLIAGTL 89 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 G I G+ +++ +G Y A+ TL ++++ + ++ T G+ G+ R Sbjct: 90 SGAFLGWIFGILAIRRQGIYFAMITLALAQMMFFVALQA-KFTGGEDGLQGVPR------ 142 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYYV L + L+ +I+ + + I++N+ Sbjct: 143 -------GKLFGVIDLSNDLTMYYVALVVVVLAFLLIVRTIHSPFGQVLKGIKENEPRAL 195 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+A G+AG+ + ++ + VI + ++GG+ +L Sbjct: 196 SLGYDVSRFKLLAFVISAALSGLAGSLKTLVLGFATLSDVHWTASGQVILMTLVGGLGTL 255 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S +A+++ + + + + + + + T + + + +L ++ Sbjct: 256 SGPIVGSAVVVLLENKIGELGNFLARITTVDWFNTLGESVTMVTGLIFVICVLAFRKGIM 315 Query: 341 RL 342 Sbjct: 316 GE 317 >gi|134280092|ref|ZP_01766803.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|134248099|gb|EBA48182.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 305] Length = 400 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 57 IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 116 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 117 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 176 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 177 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 236 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + S + + + IRD + L + + KL + Sbjct: 237 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 296 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ +AGA + I+P +I + V +GG +L + G Sbjct: 297 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 356 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV LM ++ L Sbjct: 357 SVFTAY--------------FAEYWLFFLGLIFVLVPLMLPRGIMGL 389 >gi|51595573|ref|YP_069764.1| ABC type branched-chain amino acid transporter, permease protein [Yersinia pseudotuberculosis IP 32953] gi|108806897|ref|YP_650813.1| branched chain amino acid ABC transporter permease [Yersinia pestis Antiqua] gi|108812948|ref|YP_648715.1| branched chain amino acid ABC transporter permease [Yersinia pestis Nepal516] gi|145599776|ref|YP_001163852.1| branched chain amino acid ABC transporter permease [Yersinia pestis Pestoides F] gi|149366817|ref|ZP_01888851.1| putative branched-chain amino acid transport system, permease component [Yersinia pestis CA88-4125] gi|165924454|ref|ZP_02220286.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165938409|ref|ZP_02226967.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009848|ref|ZP_02230746.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211463|ref|ZP_02237498.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400176|ref|ZP_02305689.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419528|ref|ZP_02311281.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424270|ref|ZP_02316023.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466735|ref|ZP_02331439.1| Branched-chain amino acid transport system, permease component [Yersinia pestis FV-1] gi|186894637|ref|YP_001871749.1| urea ABC transporter permease UrtB [Yersinia pseudotuberculosis PB1/+] gi|218928351|ref|YP_002346226.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis CO92] gi|229841132|ref|ZP_04461291.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843236|ref|ZP_04463382.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis biovar Orientalis str. India 195] gi|229894146|ref|ZP_04509332.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Pestoides A] gi|229903380|ref|ZP_04518493.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Nepal516] gi|270487191|ref|ZP_06204265.1| urea ABC transporter, permease protein UrtB [Yersinia pestis KIM D27] gi|294503205|ref|YP_003567267.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Z176003] gi|51588855|emb|CAH20469.1| ABC type branched-chain amino acid transporter, permease protein [Yersinia pseudotuberculosis IP 32953] gi|108776596|gb|ABG19115.1| Branched-chain amino acid transport system, permease component [Yersinia pestis Nepal516] gi|108778810|gb|ABG12868.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Antiqua] gi|115346962|emb|CAL19852.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis CO92] gi|145211472|gb|ABP40879.1| Branched-chain amino acid transport system, permease component [Yersinia pestis Pestoides F] gi|149291191|gb|EDM41266.1| putative branched-chain amino acid transport system, permease component [Yersinia pestis CA88-4125] gi|165913787|gb|EDR32406.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165923514|gb|EDR40646.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165991244|gb|EDR43545.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207234|gb|EDR51714.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166962269|gb|EDR58290.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050125|gb|EDR61533.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057119|gb|EDR66882.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186697663|gb|ACC88292.1| urea ABC transporter, permease protein UrtB [Yersinia pseudotuberculosis PB1/+] gi|229679150|gb|EEO75253.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Nepal516] gi|229689583|gb|EEO81644.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis biovar Orientalis str. India 195] gi|229697498|gb|EEO87545.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704031|gb|EEO91044.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Pestoides A] gi|262361244|gb|ACY57965.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis D106004] gi|262365219|gb|ACY61776.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis D182038] gi|270335695|gb|EFA46472.1| urea ABC transporter, permease protein UrtB [Yersinia pestis KIM D27] gi|294353664|gb|ADE64005.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis Z176003] gi|320015972|gb|ADV99543.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 533 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 81/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ S + + + +I+ + Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQFAPHWLALYPLIALPVAFFITAGIGMA 319 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W GI + L + + + Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQGIRMLFGPQNLEVANPAWLSGGVQVLPNL 377 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 378 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 437 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 438 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 496 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530 >gi|167825453|ref|ZP_02456924.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 9] Length = 362 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 19 IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 78 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 79 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 138 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 139 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 198 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + S + + + IRD + L + + KL + Sbjct: 199 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 258 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ +AGA + I+P +I + V +GG +L + G Sbjct: 259 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 318 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 319 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 351 >gi|313898239|ref|ZP_07831777.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Clostridium sp. HGF2] gi|312957003|gb|EFR38633.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Clostridium sp. HGF2] Length = 292 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 91/289 (31%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GAY I ++ L + + + Sbjct: 8 LVNGLSIGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAYVGFISIAQLHLGFFPALLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G G+I+ + K + IA LI + L G L Sbjct: 68 AMVVCGVLGVIIERIAYKPLRNATRIAALITAIGVSYFLEYSTQKIMGPGVKTYPSVLSN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + + I I ++ +R+T I + R + + Sbjct: 128 QTFHVFGIQIQMQQIYILAITIIL-----------MLALQFIVRKTKIGRSMRAVSVDAD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + I+P M I + GG+ Sbjct: 177 AAKLMGINVDATISYTFAIGSALAGAGGVLVGMYYNTINPLM-GMVPGIKAFVAAVFGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + + V L + + + + + Sbjct: 236 GIIPGAMFGGFFIGIVEALVTAYGSSLYKDAVVYAILILILIIKPAGLL 284 >gi|297161384|gb|ADI11096.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 310 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 97/308 (31%), Gaps = 7/308 (2%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + + +Y + A G ++V G + L++ + IG + + + L Sbjct: 5 PQTLVNGLTLGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTIYLWLPSGTALS 64 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + MI G + + + R Y L ++ + ++ Sbjct: 65 LALPLMIIGGIVASVAIATAAERFAY---RPLRGGPRLAPLITAIGLSIALQQAVWAFYP 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + S + + ++L+ ++ L++ ++ A + Sbjct: 122 DAKKSRSFPQFEGKSLEIFSNLHIQRGDVFLLIAAPLCMLALGLFVSKSRAGRAMQATAQ 181 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + AFA+ AF +A +++ +M F + + +L Sbjct: 182 DPDTAKLMGINTDRIIVMAFAIGGAFAAVAAVAHGLKYGQVNFEM-GFIAGLKAFTAAVL 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ +L L Y + L +V+L+R Sbjct: 241 GGIGNIYGAMLGGVVLGIAEALA---IKYIQDIPGMEQLGGGTWKDVWAFTLLIVVLLVR 297 Query: 336 SHSLLRLR 343 LL R Sbjct: 298 PQGLLGER 305 >gi|209886608|ref|YP_002290465.1| abc-type transporter, permease component: haat family [Oligotropha carboxidovorans OM5] gi|209874804|gb|ACI94600.1| abc-type transporter, permease component: haat family [Oligotropha carboxidovorans OM5] Length = 382 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 68/325 (20%), Positives = 135/325 (41%), Gaps = 21/325 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + P+ + A + M +LIY + GL+I G G+++ + +G Sbjct: 68 VVWTIPVAVVAIAVAIHEDHFQLMMLASVLIYGLACIGLTIQFGYAGVINFAGAAFFGVG 127 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++GS S+ +L+ ++ G I+ LP L+ +G Y A+ T+ +F++ L Sbjct: 128 GYTAAVMGSTGVPSLLILLA-GGFMAALIGSIIILPVLRTQGHYAALITIAFGLLFRSFL 186 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + G ++ SL+ F S + + + L L + Sbjct: 187 EVNPAL-----GGPQGLKVEGASVAGHSLLNGITFGSFEASFYLNYVLLALAAFTLFFLL 241 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L ++ I +R++ + ++ AF V + IG+AGA FA ++ I+ Sbjct: 242 ARNLEKSWIGLNLDAVREDTVGASVFGINVAGWRIFAFVVGNFLIGVAGALFAMMQNFIA 301 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F FS++++++SI++LGG+ +L + A +++ E G+ Y Sbjct: 302 PSNFTFSDSLLMLSIIVLGGIGNLWAVLPAAILVVVFPEKLQGIGEY------------- 348 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + I + LV+ R L Sbjct: 349 --RILVFAILVVLVLRFRPAGLFPR 371 >gi|302550718|ref|ZP_07303060.1| urea ABC transporter, permease UrtB [Streptomyces viridochromogenes DSM 40736] gi|302468336|gb|EFL31429.1| urea ABC transporter, permease UrtB [Streptomyces viridochromogenes DSM 40736] Length = 309 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y + A G ++V G + L++ + GA+ I Sbjct: 8 LANGLLLGSMYGLIAIGYTMVYGIVQLINFAHGEIFMTGAF----GALTVYFYILPDGTS 63 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+ + L ++ A + + + + V + Sbjct: 64 MAIAVPLMLIGGALVAILIAVGAERFAYRPLRGAPRLAPLITAIGLSLALQEVVRNFYPG 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +++L A++ +++RR+ A + + Sbjct: 124 ADRARAFPGLDATHDIGSITIKDADIFLILAAVVCMAALAIFVRRSRTGRAMQATAQDPD 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + AFA+ F +A + + M F + + +LGG+ Sbjct: 184 TAQLMGIDTNRIIVIAFAIGGFFAAVAAVAYGLKYGNVDYRM-GFLMGLKAFTAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L L S+ L LV+L R Sbjct: 243 GNIYGAMLGGVVLGIAETLASAYIDEIPGMNQLGGQSWANVWA---FCLLILVLLFRPQG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|254467514|ref|ZP_05080924.1| inner-membrane translocator [Rhodobacterales bacterium Y4I] gi|206684515|gb|EDZ44998.1| inner-membrane translocator [Rhodobacterales bacterium Y4I] Length = 329 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 114/311 (36%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ LL+ + + +I ++ + I + GL+I +G GL+SL + IG Sbjct: 12 AMIAALLIVPLAAWSLDEPFIITLATKAAILALAGVGLNIALGLGGLISLGHAAFFGIGG 71 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL + L ++ L ++ F + + I Sbjct: 72 YAMGILAAHAQNYEPLFEWPFLFEGSNQMPLIWLVAVVFSALAALVIGALSLRTSGVYFI 131 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + G S+ FP + I + + + L+ Sbjct: 132 MITLAFGQMLYYFAISWSAYGGEDGLSIWVRNEFPGLNTLDPIQFFAIAYVILCLALYFA 191 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ A R N+ ++ T +L+AF +S A G+AGA FA +SP Sbjct: 192 ARLARSPFGLALAAARQNEDRVQAVGLTPFTLRLTAFVISGAITGLAGALFADLNRFVSP 251 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 M + + ++ VILGG+ L A+ I + L G++ Y+ L + Sbjct: 252 TMLSWHNSGEIMIFVILGGVGRLYGPVAGAALYIILEHLLGGISDYWQIFLGVLLLLIVL 311 Query: 319 RHTTLMVIALF 329 ++ AL Sbjct: 312 FARGGLIGALA 322 >gi|78779211|ref|YP_397323.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus str. MIT 9312] gi|78712710|gb|ABB49887.1| urea ABC transporter membrane protein [Prochlorococcus marinus str. MIT 9312] Length = 376 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 106/358 (29%), Gaps = 35/358 (9%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MS+ ++ +K +L+ L+ + T + ++ + L + A G+ ++ Sbjct: 1 MSLSKIKFDKK----IVLSFWIILIALIIAAPTLLPVFRLNLLGRYLSLSIVALGVDLIW 56 Query: 61 GSLGLLSLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMIS 103 G GLLSL I +A+G Y + + Sbjct: 57 GYTGLLSLGQGIFFALGGYCAAMYLQITSSSEFPNNIPEFFALYGVEKLPFFWEPFRSPV 116 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 I +P+L + + ++ +IL + + + Sbjct: 117 FTFFAIWIIPALVAGLIGFLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLK 176 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 + + F + +++ + S W+ + N IRD++ Sbjct: 177 TDVTQLFGQMVGSESIQRLFFWLTAILVIASWFFAKWVVKGRFGNILIGIRDDEPRVRFT 236 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + K F+++ G++GA + +SP +I ++ V +GG +L Sbjct: 237 GYNPVIFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLG 296 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + + LV+ +L Sbjct: 297 AILGAVFINYAKSLVSE--------------ALPASWMFIQGGLFILVVTALPEGVLG 340 >gi|291616195|ref|YP_003518937.1| LivM [Pantoea ananatis LMG 20103] gi|291151225|gb|ADD75809.1| LivM [Pantoea ananatis LMG 20103] gi|327396434|dbj|BAK13856.1| high-affinity branched-chain amino acid transport system permease protein LivM [Pantoea ananatis AJ13355] Length = 358 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 105/345 (30%), Gaps = 27/345 (7%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + +L ++ L L Y ++ +IL Y + A L +V G GLLSL + Sbjct: 24 VTLMLLIMPFLALLPATHPLAISTYTLTLVGKILCYAVVAVALDLVWGYAGLLSLGHGLF 83 Query: 74 YAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +A+G Y+ + W +P + + L L L Sbjct: 84 FALGGYAMGMYLMRQAAGDGVPAFMAFLSWDRLPWFWAGTQHFAWALCLIVLVPGLLALV 143 Query: 124 IATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 + ++ G + + + F + Sbjct: 144 FGFFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFNVTATGTR 203 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 I ++ + + +S + L R+ +RD + KL + +S+ Sbjct: 204 IGLFVATVILLLVSLGLGFVLARSKFGRVLTAVRDAENRLMFCGYDPRGFKLFVWTLSAV 263 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 GMAGA + I+P + +I V LGG +L AI+ G L Sbjct: 264 LCGMAGALYVPQVGIINPGEMSPTNSIEAAIWVALGGRGTLIGPLLGAAIVNGAKSL--- 320 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F +F + + LV L ++ L Sbjct: 321 -----------FTVAFPEYWLFFLGMMFILVTLFLPRGVIGLLRR 354 >gi|317054150|ref|YP_004118175.1| inner-membrane translocator [Pantoea sp. At-9b] gi|316952145|gb|ADU71619.1| inner-membrane translocator [Pantoea sp. At-9b] Length = 344 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 117/335 (34%), Gaps = 17/335 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ V ++L F + + Y L+ + + L+ + G G+L + + Sbjct: 11 IIGVALVVMLVAFWLSGALELYTLLSVTVFLVMGLLSLSLAFIWGYGGILCFGQAAFFGL 70 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+Y I +G S W ++ + + ++ + + ++ + Sbjct: 71 GAYTYAICAINWGDSTWAVVMAVLLPTLFSLLLGYVIFYG---GVSDVYLGAITLAVSLV 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L W T G L F ++ ++ V G L Sbjct: 128 LFNWVNSTAGSEYHIGQALLGGFNGIPSVPTLNLPFQPDAILAPEAIFLVTAGCLALCYV 187 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + + IR+N++ L + KL+ FA+ +A G+AG + + Sbjct: 188 LLKFTLLSRFGKTVVAIRENEQRAGLLGYNVPAHKLATFAIGAAIAGLAGCLYVNWGAFV 247 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP +F S++ +I VI+GG +L + +L +V N Sbjct: 248 SPGVFSISQSAQIIIWVIVGGRGTLIGPVISCILLQWMVTRLGAQQTVDVN--------- 298 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + L + +L+ LL +R Sbjct: 299 -----LVLGVILAVFVLLIPGGLLPTLQRVWRRKR 328 >gi|170723819|ref|YP_001751507.1| inner-membrane translocator [Pseudomonas putida W619] gi|169761822|gb|ACA75138.1| inner-membrane translocator [Pseudomonas putida W619] Length = 304 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAWRVEVGTGFVQLTYTKIFILIAAFVGMGLLTYVIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + + +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|134300766|ref|YP_001114262.1| inner-membrane translocator [Desulfotomaculum reducens MI-1] gi|134053466|gb|ABO51437.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Desulfotomaculum reducens MI-1] Length = 297 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 93/306 (30%), Gaps = 22/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + + +Y + A G ++V G L L++ + AY + L WL Sbjct: 8 QNLANGISLGSLYALIAIGYTMVYGILRLINFAHADLLMVAAYVSFYGIMVFALPWWLSF 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + + G+ + + + I+ LI + +L + G Sbjct: 68 LIAIVFTALLGVSIEKIAYRPLRSAPRISVLISAIGVSFLLENLGIVAIGARPKSFPRP- 126 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + V + + + L ++ + +T A R + + Sbjct: 127 ---------EEMVWNIKIGDVSFLSLTVIIPVVTMVLLVAVTYMVNKTKTGTAMRAVSRD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + + + F V S+ + G ++ +I P M + ++G Sbjct: 178 FETASLMAIDVNKVVSTTFVVGSSLAAVGGIMWSLQYPQIDPLM-GVFPGLKCFIAAVMG 236 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ IL + F + + L ++L + Sbjct: 237 GIGSIPGAMLGGFILGMGEVFL-----------VAFMPELSGYRDAFAFVILIFILLFKP 285 Query: 337 HSLLRL 342 +L Sbjct: 286 TGILGE 291 >gi|308185586|ref|YP_003929717.1| ABC transport system, permease protein [Pantoea vagans C9-1] gi|308056096|gb|ADO08268.1| Putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 357 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 101/347 (29%), Gaps = 27/347 (7%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 I L V+ L L Y ++ +IL Y + A L +V G GLLSL Sbjct: 22 LAITLALLVMPFLALLPATHPLAISTYTLTLVGKILCYAVVAVALDLVWGYAGLLSLGHG 81 Query: 72 IAYAIGAYSYVIL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 + +A+G Y+ + S + L Sbjct: 82 LFFALGGYAMGMYLMRQAAGEGLPAFMSFLSWRELPWFWTGTEYFAWALCLSMLVPGLLA 141 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 + A + ++ G + + + F + Sbjct: 142 LVFGFFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFLVTATG 201 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 I ++ + + LS I L R+ +RD + KL + +S Sbjct: 202 TRIGLFIATVLLLLLSLVIGFALARSKFGRVLTAVRDAENRLMFCGYDPRGFKLFVWTLS 261 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + G+AGA + I+P + +I V LGG +L AI+ G Sbjct: 262 AVLCGLAGALYVPQVGIINPGEMSPANSIEAAIWVALGGRGTLIGPLLGAAIVNGARSF- 320 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F +F + + LV L H ++ L Sbjct: 321 -------------FTVAFPEYWLFFLGLMFILVTLFLPHGVIGLLRR 354 >gi|78214119|ref|YP_382898.1| putative membrane protein of urea ABC transport system [Synechococcus sp. CC9605] gi|78198578|gb|ABB36343.1| putative membrane protein of urea ABC transport system [Synechococcus sp. CC9605] Length = 382 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 99/354 (27%), Gaps = 34/354 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + L + L ++ ++ + A G+ ++ G GLLS Sbjct: 4 FKRLIPWILLAFAFFILPAMADKDLFGFSQFRLNLFGRYFSLAFVALGIDLIWGYTGLLS 63 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L I +++G Y+ + + + + LP ++ Sbjct: 64 LGQGIFFSLGGYAIAMHLLLVTKNDFTTGANGLPKFFENYGVDQLPFFWEPFWSFPVSIA 123 Query: 128 IMSEIFQNI--------------------LIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + + + + + + + S Sbjct: 124 AIFIVPSIVAGLVGYLIFRNRIKGVYFSIITQASLMVFYHFFNGQQKLVNGTNGLKTSTT 183 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 F + ++ Y + L + + + +L +A IRD++ Sbjct: 184 EIFGLQAGSDDAQLLFYRITLILLPFAFLLCKYLTSGRFGDALIGIRDDEPRLRFSGFNP 243 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 K+ F V+ G++GA + +SP S +I ++ V +GG +L Sbjct: 244 TPFKVIVFVVAGGLAGVSGALYTVQSGIVSPQFMSISMSIEMVIWVAVGGRGTLVGPILG 303 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + L + + V+++ + Sbjct: 304 AVIVNYLRSLVSE--------------ALPEAWLFVQGALFVFVVVLMPDGIYG 343 >gi|323703486|ref|ZP_08115133.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] gi|323531576|gb|EGB21468.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] Length = 297 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 96/307 (31%), Gaps = 22/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + + +Y + A G ++V G L L++ + AY + L W+ Sbjct: 8 QNLANGVSLGSLYALIAIGYTMVYGILRLINFAHADLLMVAAYIAFYGILVFSLPWWVSF 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ +I+ G+ + + + D I+ LI + +L + G Sbjct: 68 IIAVVITALLGVSIEKVAYRPLRDAPRISVLISAIGVSFLLENLGIVAIGARPKTFPRPE 127 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + V + + + L ++ + +T I A R + + Sbjct: 128 S----------MVWNIKIGDVSFLSLAIIIPVVTIILLLAVEFLVNKTKIGTAMRAVSRD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + + + F V S + G ++ +I P M + ++G Sbjct: 178 FETASLMAVDVNKVISTTFVVGSGLAAVGGIMWSLQYPQIDPLM-GVFPGLKCFIAAVMG 236 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ IL + F + + L ++L + Sbjct: 237 GIGNIKGAMLGGFILGMGEVFL-----------VAFMPDLSGYRDAFAFVILIFILLFKP 285 Query: 337 HSLLRLR 343 +L + Sbjct: 286 TGILGEK 292 >gi|260462642|ref|ZP_05810848.1| ABC transporter related protein [Mesorhizobium opportunistum WSM2075] gi|259031548|gb|EEW32818.1| ABC transporter related protein [Mesorhizobium opportunistum WSM2075] Length = 620 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 106/334 (31%), Gaps = 9/334 (2%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L +V LLL + + I + GL I G+ G++S + Sbjct: 26 ALCMVVVLLLMALAAFVFGGAAMQRVVTYAAIMLTAVLGLQIFSGNSGIVSFGQAAFVGL 85 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+ IL L L + ++G ++ + Sbjct: 86 GAYATGILTMPTALQRTALRDLPEFLAGYQLSFFAALAVVLVLAVVIGLLTGTPL----- 140 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + + +A + V + + + + ++ Sbjct: 141 ---LRLTGSSASIATLAMLIIVYTLLVAGREITRGSQPFYGVPREVGLWTAAAVASVALV 197 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 R T+ A R ++++ ++ A+L+A+ AGA A Sbjct: 198 AARLFRETSFGLASRAAANDERGAAAVGVDQRTARLAAWVAGVVAAMAAGAMMAQFLGAF 257 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP F F +++++I+GGMTS + I V+E+ L F Sbjct: 258 SPRDFYFDLGFTMLAMLIVGGMTSSLGAFAGVIVTIVVIEVVRRFEGGGEVLGLHLPVLF 317 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + ++ IA+ LVI R L R + Sbjct: 318 GLTQ-GVLAIAMILVIWQRPTGLFGERELNLLRR 350 >gi|261856189|ref|YP_003263472.1| urea ABC transporter permease [Halothiobacillus neapolitanus c2] gi|261836658|gb|ACX96425.1| urea ABC transporter, permease protein UrtC [Halothiobacillus neapolitanus c2] Length = 384 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 42/329 (12%), Positives = 88/329 (26%), Gaps = 36/329 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG---------- 85 Y + + L Y A L ++ G G+LSL I + +G Y + Sbjct: 34 DIYRLNNVGKYLTYAFAAVSLVMLWGHAGILSLGQGIFFGVGGYCMAMYLKLEASDPAST 93 Query: 86 --SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + ++ A L + + Sbjct: 94 ARQTTPGIPDFMDWNQITQLPLFWEPFHSLPFTILAIFVVPAVLAYIVGAAMFKRRVGGV 153 Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193 +A L L + + + + +YY+ + Sbjct: 154 YFAIITQAIAAILTILVVGQQGYTGGINGITDLKTLHGWNINTDSAKYILYYINGVLLVG 213 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++ + + +RD + + K+ F++S+ + GA F Sbjct: 214 VILLCRYVLSSKLGRLLLAMRDKEDRVRFSGYDVSNFKIFVFSLSAIISAIGGAMFTLQV 273 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ + +GG SL ++ F Sbjct: 274 GFMSPTFVGIVPSIEMVILAAVGGRLSLIGAVYGALLV--------------NYGKSAFS 319 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F LM V++ + L L Sbjct: 320 ETFPALWLFLMGGLFIGVVMFFPNGLAGL 348 >gi|153007252|ref|YP_001381577.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] gi|152030825|gb|ABS28593.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] Length = 309 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 100/314 (31%), Gaps = 24/314 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G ++V G L L++ Y +GA++ LG+ Sbjct: 8 LVNGLSLGTIYALIALGYTMVYGVLKLINFAHGDVYMVGAFAGYYLGNALDVGDEPTLMK 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 ++++ + A+ + +I L R + + + + ++ G I Sbjct: 68 AVFVTLGAMAICALLGVVIERLAYRPLRHRARLTSLITAIGVSFLLEYGFQLQPFGFLPI 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 +L+ + V + LL L ++ + RT A Sbjct: 128 EFPPGPT--PRFFPALVERSEIELAGVAISNYDVIGLLVAVGLMLALQFIVYRTRFGTAM 185 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + + + + + FA+ SA AG A R RI +F + Sbjct: 186 RAVSFDPQVAGLMGIPVNRVIAWTFALGSALAAAAGILNAVPRPRID-PLFGLMPGLKAF 244 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +LGG+ S+ +L E G + + L L Sbjct: 245 VAAVLGGIGSVPGAMVGGLVLGLAEEFVSGYTS-------------SSYRDAIAFAVLIL 291 Query: 331 VILMRSHSLLRLRT 344 V+L+R + Sbjct: 292 VLLLRPEGIFGRAR 305 >gi|229084928|ref|ZP_04217181.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock3-44] gi|228698401|gb|EEL51133.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock3-44] Length = 339 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 130/324 (40%), Gaps = 31/324 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 20 VAVLVCLSIFPFVNDSRSLLILFTQIFIFAIFAMSFDLLLGYTGIVSFGHCMFFGIGAYC 79 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L RY +S ++ I ++ +++ I+GL SL+ + + A+ TL +S++F + Sbjct: 80 VALLFDRYEVSIMSFFIGIALAVILAAIISYIIGLLSLRLKSHFYAMLTLAVSQLFFVLA 139 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YY+ LG + + Sbjct: 140 EKWRAVTHGGDGFTFGVPDMFRDRF-------------------AFYYITLGCLLVIFLL 180 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + I+ Sbjct: 181 LRLFTQSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFIN 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L Sbjct: 241 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATQYPIF 291 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 R T + + +V+L L+ Sbjct: 292 ERWTIFLGLLYIIVLLGFPTGLVG 315 >gi|188025703|ref|ZP_02959520.2| hypothetical protein PROSTU_01383 [Providencia stuartii ATCC 25827] gi|188022806|gb|EDU60846.1| hypothetical protein PROSTU_01383 [Providencia stuartii ATCC 25827] Length = 316 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIP 97 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 20 LLNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAGLMMLGIDVGWI 79 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + A A ++ I I + R Sbjct: 80 LIAAAFVAAIVVSSSYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQGSRDL 139 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ L++R + + A R ++ Sbjct: 140 ALPSLITGQWVLGESDGFEASITKMQLTIWVVTLLAMLALTLFIRYSRMGRACRACAEDL 199 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 200 KMASLLGINTDRVISLTFVIGATMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 258 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL + + ++ F L V+L+ Sbjct: 259 IGSIPGAMLGGIILGVAEAMTSAYLSTEYKDVVSFG-------------LLIGVLLIMPT 305 Query: 338 SLLRL 342 +L Sbjct: 306 GILGR 310 >gi|146311643|ref|YP_001176717.1| inner-membrane translocator [Enterobacter sp. 638] gi|145318519|gb|ABP60666.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Enterobacter sp. 638] Length = 357 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 104/342 (30%), Gaps = 27/342 (7%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 IL +L V+ L L ++ ++ +IL Y + A L +V G G+LSL I Sbjct: 24 ILAILLVLPFLALLPESHPLALSTWMLTLVGKILCYAVVAVALDLVWGYAGMLSLGHGIF 83 Query: 74 YAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +A+G Y+ + W +P + + L + L Sbjct: 84 FALGGYAMGMYLMRQASGEGLPAFMSFLSWSELPWFWWGTQHFAWALVLIVMIPGLLALI 143 Query: 124 IATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 + ++ G + + + FP + Sbjct: 144 FGWFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATTTR 203 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 I ++ + + S ++ WL ++ +RD + KL + +S+ Sbjct: 204 IALFLATVALLVASLALGFWLAKSKFGRILTAVRDAENRLTFCGYDPRGFKLLVWTLSAV 263 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA + I+P + +I V LGG +L A++ G Sbjct: 264 LCGLAGALYVPQVGIINPGEMSPTNSIEAAIWVALGGRGTLVGPVIGAALVNGAKSY--- 320 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + V L + L Sbjct: 321 -----------FTVAMPEYWQLFLGGIFIAVTLFLPRGVYGL 351 >gi|304396492|ref|ZP_07378373.1| urea ABC transporter, permease protein UrtC [Pantoea sp. aB] gi|304356001|gb|EFM20367.1| urea ABC transporter, permease protein UrtC [Pantoea sp. aB] Length = 357 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 101/346 (29%), Gaps = 27/346 (7%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 I L V+ L L Y ++ +IL Y + A L +V G GLLSL + Sbjct: 23 AITLALLVMPFLALLPAAHPLAISTYTLTLVGKILCYAVVAVALDLVWGYAGLLSLGHGL 82 Query: 73 AYAIGAYSYVIL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 +A+G Y+ + S + L Sbjct: 83 FFALGGYAMGMYLMRQAAGEGLPAFMSFLSWRELPWFWTGTEYFAWALCLSMLVPGLLAL 142 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 + A + ++ G + + + F + Sbjct: 143 LFGFFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFSVTATGT 202 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 I ++ + + LS I L R+ +RD + KL + +S+ Sbjct: 203 RIGLFIATVLLLLLSLVIGFTLARSKFGRVLTAVRDAENRLMFCGYDPRGFKLLVWTLSA 262 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 G+AGA + I+P + +I V LGG +L AI+ G Sbjct: 263 VLCGLAGALYVPQVGIINPGEMSPANSIEAAIWVALGGRGTLIGPLLGAAIVNGARSF-- 320 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F +F + + LV L H ++ L Sbjct: 321 ------------FTVAFPEYWLFFLGLMFILVTLFLPHGVIGLLRR 354 >gi|257438527|ref|ZP_05614282.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Faecalibacterium prausnitzii A2-165] gi|257199106|gb|EEU97390.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Faecalibacterium prausnitzii A2-165] Length = 292 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 96/305 (31%), Gaps = 25/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G S+V G + LL+ +GAY + ++ GL + Sbjct: 8 LINGLSLGSIYALIALGYSMVYGIILLLNFAHGDVIMVGAYMSWFVMNQLGLGPVTAVCA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ + + I+ LI + L + G Sbjct: 68 TIITCTLLGVVIEKVAYTPLRNAPRISLLITAIGVSFFLEYTAELVMGS----------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + S F V + L+ + +++T + A R + ++ Sbjct: 117 GAKVIPSYYGNKTFMIGSVPLGLTSVITLVVTVLSMLVLTFLVQKTKLGKAMRAVSEDMD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FAV SA G+ + S + +P M + +LGG+ Sbjct: 177 AARLMGINVNSTISFTFAVGSALAGIGSVLYCCSYPQATPTM-GSMLGLKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + + + + F L +V+L + Sbjct: 236 GSIPGAMIGGIAIGLCECFVSAIGLSAWKDAVTF-------------AILIIVLLFKPTG 282 Query: 339 LLRLR 343 L + Sbjct: 283 FLGRK 287 >gi|194292064|ref|YP_002007971.1| branched-chain amino acid inner-membrane translocator [Cupriavidus taiwanensis LMG 19424] gi|193225968|emb|CAQ71915.1| Branched-chain amino acid inner-membrane translocator [Cupriavidus taiwanensis LMG 19424] Length = 332 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 116/302 (38%), Gaps = 24/302 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ ++LIY M A ++++G GLLS I + +G+Y+ + +R L + L + ++ Sbjct: 33 TLATEVLIYAMAAMACNLLLGYTGLLSFGQGIFFGLGSYAVGLALTRASLPMPLALLLAI 92 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 I A ++G +++ RG Y + TL +++F + IT G G+ R Sbjct: 93 AIGAAAAALVGWFAIRQRGTYFVMLTLAFAQMFYFLAYTAPGITGGDNGLLDIPRPP--- 149 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + + Y + + +L + + + IRDN++ Sbjct: 150 ------LSVAGHALVPLASPWQFYGFVAVLFLAVFLAVLRVTESVLGRTLLAIRDNEERA 203 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + KL AF VS A G+AGA A + + +++ + ++GG + Sbjct: 204 LAVGYNVKAFKLLAFMVSGAVTGLAGALHAMLTGIAPLTNIDYHASEMILVMTVIGGTGN 263 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + A + + + + + L+ L V L L Sbjct: 264 IFASVLGAAFYVLLADWLSTLWPRW---------------LMLLGFLLIAVSLFMQRGLW 308 Query: 341 RL 342 L Sbjct: 309 GL 310 >gi|113868586|ref|YP_727075.1| ABC transporter permease [Ralstonia eutropha H16] gi|113527362|emb|CAJ93707.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 308 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 94/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90 + + IY + A G ++V G +G+++ Y IGAY G L Sbjct: 12 LVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGAQAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +++G G + + + + LI + L + I G Sbjct: 72 VLGAALLVSVLVTGVYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + I F V ++ L ++ L++ R+ + A Sbjct: 129 ----RDVSVPVLISGAIEFQMGSDFTVTVPYSRLLIVGVTLVLMIALTLFIGRSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ + L F + + + G + +++ F I Sbjct: 185 RACAEDMRMANLLGIDTNKVISFTFVLGAMLAAVGGVLIGLTIGKLN-PFIGFIAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L G + ++ F + + Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300 >gi|313114340|ref|ZP_07799873.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Faecalibacterium cf. prausnitzii KLE1255] gi|310623334|gb|EFQ06756.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Faecalibacterium cf. prausnitzii KLE1255] Length = 292 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 97/305 (31%), Gaps = 25/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G S+V G + LL+ +GAY + ++ GL + Sbjct: 8 LINGLSLGSIYALIALGYSMVYGIILLLNFAHGDVIMVGAYMSWFVMNQLGLGPVTAVCA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ + + I+ LI + L + G Sbjct: 68 TIITCTLLGVVIEKIAYTPLRNAPRISLLITAIGVSFFLEYTAELILGS----------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + F V + LL + +++T + A R + ++ Sbjct: 117 GAKVIPAYYTNQTFHIGSVPLGLTSVITLLVTVLSMLVLTFLVQKTKLGKAMRAVSEDMD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FAV SA G+ + S + +P M + +LGG+ Sbjct: 177 AARLMGINVNSTISFTFAVGSALAGIGSGLYCCSYPQATPTM-GSMLGLKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + + + + F L +V+L++ Sbjct: 236 GSIPGAMIGGIAIGLCECFVSAIGLSAWKDAVTF-------------AILIIVLLVKPTG 282 Query: 339 LLRLR 343 L + Sbjct: 283 FLGRK 287 >gi|148253917|ref|YP_001238502.1| putative high-affinity branched-chain amino acid transport system permease [Bradyrhizobium sp. BTAi1] gi|146406090|gb|ABQ34596.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 628 Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 57/320 (17%), Positives = 122/320 (38%), Gaps = 33/320 (10%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L + + + Y ++G +I I+V+FA L ++ GL S + +GAY Sbjct: 315 VVALALVAMLPFIAGNYALTVGAEIAIFVIFAASLHFLMAVGGLASFGHAAYFGLGAYGV 374 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 L GL + + I + ++ + G +++ G Y A+ TL ++I +I +W Sbjct: 375 AFLAKMAGLPMIVCILLGPLLGALGAAVFGAFAVQLSGVYFAMLTLAFAQIVWSIAFQWV 434 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G +P + Y++ LG+ S++ + Sbjct: 435 AVTGGDNG------------------ILGLWPEKWAASPSHFYWLALGVSAFVVSVLRLI 476 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + A R +RD+ S+ + +AF ++ G+ GA FA + + PD Sbjct: 477 TFSPFGYALRGMRDSPLRSESIGINGKRIQWTAFIIAGTTAGIGGALFAYLKGSVFPDNM 536 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 S ++ + +V+LGG+ ++ + + Sbjct: 537 GISLSVDALVMVLLGGVETVPGAIFGAIVYKALNIWLVSQ---------------TDWSK 581 Query: 322 TLMVIALFLVILMRSHSLLR 341 ++ I + L++++ ++ Sbjct: 582 LVLGIFIVLIVVVFPKGIVG 601 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 96/311 (30%), Gaps = 28/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--SRYGLSIWLLI 96 + + A GLSI+ G +++ Y +GAY L L W I Sbjct: 8 FLTGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYIAFSLTERLSGALGFWGGI 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V+A+ G+I+ + L+ + L+ + ++ + G Sbjct: 68 VVAALAVAVIGVIVEIVLLRRIYHAPELFQLLATFGLTLMVEDLVVLIWGPD-------- 119 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 R+ + ++++ + ++ L +RT R + Sbjct: 120 --DLVGRRAPGFKGAVDFFGQNIPSYDLFLIVLGPVVLGALWLLFQRTRWGILVRAATQD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L + S FAV + GA + V +V++G Sbjct: 178 RDMVAALGVNQKWLFTSVFAVGVFLAALGGALQIPR--DAVHHAMDLRIIVEVFVVVVIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ A ++ + + F L+ + + +V+++R Sbjct: 236 GLGSILGAFVAAVLVSELNAFGILI--------------FPTISLILVFLVMAVVLVIRP 281 Query: 337 HSLLRLRTPSN 347 L + Sbjct: 282 WGLFGKKEAPA 292 >gi|333023601|ref|ZP_08451665.1| putative branched-chain amino acid ABC transporter permease [Streptomyces sp. Tu6071] gi|332743453|gb|EGJ73894.1| putative branched-chain amino acid ABC transporter permease [Streptomyces sp. Tu6071] Length = 379 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 89/272 (32%), Gaps = 12/272 (4%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 + A G +++G GLLS + +A G+Y+ GL WL + ++ A + Sbjct: 66 FGGLATGYDLLLGRTGLLSFGHALYFAAGSYATNTFLREAGLPFWLAAVLGLVLGVAVAL 125 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + G SL+ G ++ TL ++ ++ + G + + Sbjct: 126 LFGAVSLRVTGIGFSMVTLAFAQAASLLVSRDPGGFTG------------GEEGISAPGD 173 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 + +Y++ L L +++ + W I++N++ L Sbjct: 174 ALPASLVGIGNTANLYWIALAFLVLCLAVVHRTTHSPTGRVWEGIKENERRVEVLGLRPY 233 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 KL AF V+ + G +P + ++ +V+LGG + Sbjct: 234 GFKLVAFVVAGTLAALGGIVHLLLTGGSTPATTTSEFTLSLLVMVVLGGSGTRWGPMLGG 293 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + + + L + Sbjct: 294 ILYTWADHRLGDLANSATVADLPGVLRVPLSQ 325 >gi|311105750|ref|YP_003978603.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310760439|gb|ADP15888.1| inner-membrane translocator 29 [Achromobacter xylosoxidans A8] Length = 338 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 119/312 (38%), Gaps = 30/312 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 ++ ++ I I+++ +FA G +V G LG++S G Y+ + RYGL Sbjct: 22 PFCTQNDFLLNLSILIMVWSIFAVGFDLVFGLLGMVSFGHAAFLGTGGYALALATQRYGL 81 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKWKPITNGKAG 149 + ++ + AC I + +L+ G + A+ TL +S++ + K + T G G Sbjct: 82 PFEAGLALAIVAGAACAWIFSVFALRVSGIFFALVTLALSQLMYILADSKLREWTGGADG 141 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + R G + Y+ + + L +++ LR + A Sbjct: 142 LPGIGRPELAGIDFFD--------------TVNFYWYVAAIFALVMALMAMLRASPFGRA 187 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 +R N+ L + K F VS A G+AG AA ++P M ++ + V Sbjct: 188 VAGVRQNEIRAAQLGYNVQRLKQITFLVSGAVGGLAGGLLAAVLMYMNPQMLHWTTSGDV 247 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 I + +LGG +L + + E G Y++ ++ + Sbjct: 248 IIMTLLGGAGTLWGPVAGVLLFEALKEWLSGWTPYWYG---------------ILGLVFI 292 Query: 330 LVILMRSHSLLR 341 L L +L Sbjct: 293 LATLYFPQGVLG 304 >gi|301166939|emb|CBW26518.1| putative transport system permease protein [Bacteriovorax marinus SJ] Length = 293 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 128/313 (40%), Gaps = 43/313 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------RYGLSI 92 I + I + ++ + L+++ G G SL +A+GAY+ L++ Sbjct: 5 IIHLSILCGVNIILSVSLNLINGICGQFSLGHAGFWAVGAYTAASFTVFSNLGLPPSLTL 64 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + +++ G+I+G+P L+ RGDYLAIATL EI + +++ I G G Sbjct: 65 IAGCIIGFIVAAIAGLIIGVPCLRLRGDYLAIATLGFGEIIRIVIMNTDAI-GGPRGFSG 123 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 +I +Y + ++ II + R A + Sbjct: 124 IP-------------------------KISNFYWVYLFVIITVLIITNIMRGTHGRAIIS 158 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR+++ A S+ K AF + + F G+AGA +A + P+ F F ++I++ + Sbjct: 159 IREDEIAADSMGIYTFKYKTMAFVIGAGFAGLAGALYAHYTQFLHPNGFTFMMSVIILLM 218 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 VILGG+ S++ IL + E+ M + + + + L ++ Sbjct: 219 VILGGLGSITGSIVGAIILTLLPEVLRLMGE-----------TISEWRMVIYSVLLITLM 267 Query: 333 LMRSHSLLRLRTP 345 L+R + Sbjct: 268 LLRPGGIFGKHEF 280 >gi|26989469|ref|NP_744894.1| branched-chain amino acid ABC transporter, permease protein, putative [Pseudomonas putida KT2440] gi|24984337|gb|AAN68358.1|AE016468_12 branched-chain amino acid ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 354 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 70/330 (21%), Positives = 135/330 (40%), Gaps = 16/330 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + L+ F+ L + +++++ I L+ + GL+++ G G S+ Sbjct: 24 WPVGLPLLLLVAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNVLTGYTGQTSVGAAGFM 83 Query: 75 AIGAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 A+GA+ +Y +L GL + L + +I+G G++ G+PS + +G YL + TL Sbjct: 84 AVGAFATYGLLLRVPGLPLPLALIGGGLIAGLVGLLFGIPSSRIKGFYLMVTTLAAQFFL 143 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + K+ N + ++ L + + + Y + L L Sbjct: 144 EWVFAKFPWFYNHASSGTISAPRLELFSH-------------SLASPVGRYLLTLSCVVL 190 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-AS 252 + + L R+ + W IRD A + + K AFAVSS ++G+AGA +A A Sbjct: 191 LTWVAVNLVRSQVGRNWMAIRDMDTAASVIGIPVERYKRLAFAVSSFYLGIAGALWAFAY 250 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 S F + + ++ I+I+GGM S++ A + L + F + Sbjct: 251 LGTSSAGSFDINRSFQILFIIIIGGMGSIAGNFIGAAFISLTPILLSHAGQWLFGGNVDA 310 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L + ++ L+RL Sbjct: 311 G-QLQNLQKILFGCLIIWFLIKEPEGLVRL 339 >gi|218671204|ref|ZP_03520875.1| putative transmembrane component of ABC transporter [Rhizobium etli GR56] Length = 257 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 15/271 (5%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 LI+ + A GL++ +G G +SL AIGAY +L + +P++ Sbjct: 1 SWLIFTIAAMGLNLTLGYAGQISLAQASFMAIGAYITALLTLAGWH-WIVAMPLALFACF 59 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 G+++G P+L+ +G +LA TL + + +L +T G G+ R Sbjct: 60 VIGLLLGYPALRVKGHFLAFVTLAFNTLVFLVLRNEDWLTGGSIGLVGMPRP-------- 111 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 F + ++ YY L + +A + + R+ A++ +R+N SL Sbjct: 112 ------DFGLFSTMKQLPFYYFTLAVTAFAALAMWGIVRSPWGRAFKALRENPVRAESLG 165 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 L AFA+ S + G+AG I P F + ++ ++ +VI+GG Sbjct: 166 VDTRRITLLAFAIGSTYGGLAGTLITPLVQFIEPGSFALAHSLRILLMVIVGGAGYFFGP 225 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++I + E+ YY ++ S Sbjct: 226 WVGAGVVILLPEVLRFTQGYYLIIYSRWSSS 256 >gi|148548213|ref|YP_001268315.1| inner-membrane translocator [Pseudomonas putida F1] gi|148512271|gb|ABQ79131.1| inner-membrane translocator [Pseudomonas putida F1] Length = 354 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 70/330 (21%), Positives = 134/330 (40%), Gaps = 16/330 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + L+ F+ L + +++++ I L+ + GL+++ G G S+ Sbjct: 24 WPVGLPLLLLVAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFM 83 Query: 75 AIGAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 A+GA+ +Y +L GL + L + +I+G G++ G+PS + +G YL + TL Sbjct: 84 AVGAFATYGLLLRVPGLPLPLALIGGGLIAGLVGLLFGIPSSRIKGFYLMVTTLAAQFFL 143 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + K+ N + ++ L + + Y + L L Sbjct: 144 EWVFAKFPWFYNHASSGTISAPRLELFGH-------------SLASPVGRYLLTLSCVVL 190 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-AS 252 + + L R+ + W IRD A + + K AFAVSS ++G+AGA +A A Sbjct: 191 LTWVAVNLVRSQVGRNWMAIRDMDTAASVIGIPVERYKRLAFAVSSFYLGIAGALWAFAY 250 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 S F + + ++ I+I+GGM S++ A + L + F + Sbjct: 251 LGTSSAGSFDINRSFQILFIIIIGGMGSIAGNFIGAAFISLTPILLSHAGQWLFGGNVDA 310 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L + ++ L+RL Sbjct: 311 G-QLQNLQKILFGSLIIWFLIKEPEGLVRL 339 >gi|330815764|ref|YP_004359469.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327368157|gb|AEA59513.1| ABC branched chain amino acid family transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 393 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 102/347 (29%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ + + Y + A L +V G G+LSL + Sbjct: 50 IAIGIGVPLAALVVPESSAFHLSAYAMTIAGKFMCYAIGALALDLVWGYCGILSLGHGLF 109 Query: 74 YAIGAYSYVILGSRYGLS----------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 +A+G Y+ + R + + ++ G +L A Sbjct: 110 FALGGYAIGMYLMREIGHDGVYGSSLPDFMVFLNWKSLPWYWSGSDHLAVALVLVVLVPA 169 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSS 175 + + +K ++ + A L F R + + Sbjct: 170 VVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRLAGYGIT 229 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + L+ + + + +RD + L + + KL + Sbjct: 230 SPGMRTVLLLASFATLVLAFLAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFIW 289 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 290 TVSAVLCGIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 349 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 350 SFFTAY--------------FAEYWLFFLGLIFVLVPLLMPRGIVGL 382 >gi|313903204|ref|ZP_07836597.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter subterraneus DSM 13965] gi|313466515|gb|EFR62036.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter subterraneus DSM 13965] Length = 292 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 91/304 (29%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A G ++V G + L++ + IGA++ + +GL + + Sbjct: 8 LLIGLSVGTIYALIALGYTMVYGIIKLINFAHGEVFMIGAFTGYYALTAWGLGFIPALLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +S G+ + + + ++ +A L + + G Sbjct: 68 AMGVSALLGVTIERVAYRRLRNFPRLAALTTAIGVSLFIQYTTIYLRGAQSEAYPSLFPN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R + +L L A + +++T A R + + + Sbjct: 128 -----------RRLEILGAGINLDALVILAVSVALMAILQFIVQKTRTGKAMRAVSFDLE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + RI P M + ++GG+ Sbjct: 177 AARLMGIPVNRTISITFAIGSALGGAAGVVYGLYYTRIDPLM-GVLPGLKAFVAAVVGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V L F F + R Sbjct: 236 GSIPGAMVGGLVIGMVETLVSAAGLSLFRDAAAFLILILILLF-------------RPEG 282 Query: 339 LLRL 342 L Sbjct: 283 LFGR 286 >gi|300811647|ref|ZP_07092123.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497348|gb|EFK32394.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 292 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 91/288 (31%), Gaps = 12/288 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G IV G LL+ Y +GAY + + Sbjct: 8 LINGLSLGSIYALLALGYMIVYGISKLLNFAHGDVYMLGAYWGYYTINYLHFGFITALIT 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G G+I+ + + + +A LI + L + Sbjct: 68 AMIVCGLAGVIIEAVAYRPLRNAPRVAALITAIGVSFFLENGMSY-----------LVTS 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I+ F V +L+ L+ ++ + T A R++ + Sbjct: 117 DTRNFPQVIKRKTFDLGGVTISNIQLIILVTTLILTLGLMYIINYTKTGRAMRSVSTDYD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I FA+ SA G AG + I P M + I +LGG+ Sbjct: 177 AASLMGININHTVSITFALGSALAGAAGVLIGLYYNSIDPLM-GMTPGIKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 S+ A ++ + M F F + + + Sbjct: 236 GSIPGAAVGGFLIGLLETAVQAMGFSAFRDAAVYIVLIVILLVLPGGL 283 >gi|312868450|ref|ZP_07728650.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus parasanguinis F0405] gi|311096195|gb|EFQ54439.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus parasanguinis F0405] Length = 296 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 107/303 (35%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + + Sbjct: 12 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMVGAFMGYFLLNSWKVNFFVALLL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 72 AMVGTAILGVVIEYLAYRPLRHSTRIAALITAIGVSFLLEYGMVFFVGANTRS------- 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I+ R+ + +L FL ++ +++T + A R + + Sbjct: 125 ----FPQVIKTLRYNFGPISISNIQLMILGVSVFLMVALQFIIQKTKMGKAMRAVSVDSD 180 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + I P M + I +LGG+ Sbjct: 181 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + + ++ L +++L+R Sbjct: 240 GIIPGAALGGFVIGLLETFATAIG-------------LSDFRDAIVYAILIVILLIRPAG 286 Query: 339 LLR 341 +L Sbjct: 287 ILG 289 >gi|288921875|ref|ZP_06416089.1| inner-membrane translocator [Frankia sp. EUN1f] gi|288346770|gb|EFC81085.1| inner-membrane translocator [Frankia sp. EUN1f] Length = 675 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 120/312 (38%), Gaps = 17/312 (5%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 G I + + L ++ G +G +SL + + ++ + + G+ Sbjct: 334 GLPLLSSQWRLGMITSGVAAVLCLSLVVLTGFVGQISLAQMSLAGVAGFTLSKVTADGGV 393 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + ++ + + A G+++ +P+L+ RG +LA+ TL + + + K +T G +G Sbjct: 394 PFPVGPLIAVLAATALGLLVAVPALRVRGLHLAVVTLAAAVAIEEFIFKNPKVTGGLSGS 453 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V F + + + Y +L + +A + LRR + Sbjct: 454 TVPQPEIFGFS-------LGIRGGAEDFPRVTFGYFVLVVTVATALAVAALRRHELGRRM 506 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 +R +++A + KL+ A+SSA G+ G A + ++S + ++ ++ Sbjct: 507 LAVRGSERAAAAAGINAARVKLTGAAISSALAGVGGTLLAYQQGQLSYASYSTFTSLGLL 566 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 V LGG+TS+S + + + L T ++ I L + Sbjct: 567 VAVYLGGITSVSGALLGGTL----------YSGGLVSVALHEWAGLGDYETLILSIGLII 616 Query: 331 VILMRSHSLLRL 342 V + L L Sbjct: 617 VAIRSPDGLAGL 628 >gi|328543487|ref|YP_004303596.1| Inner-membrane translocator [polymorphum gilvum SL003B-26A1] gi|326413231|gb|ADZ70294.1| Inner-membrane translocator [Polymorphum gilvum SL003B-26A1] Length = 326 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 110/294 (37%), Gaps = 3/294 (1%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++L +V L F+ Q ++ +ILIY + A L+ ++G G++S Sbjct: 1 MRVLGFAVLVAALAALPFVTDALGQAAWLALATRILIYGIAAASLNFILGYGGMVSFGHA 60 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + IG Y IL + + L + + + + + +L Sbjct: 61 AFFGIGGYVVGILFTHHASGEPLFGVIPGTDQMLVTLPVAILVAGLFAAAIGALSLRTGG 120 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + ++ + G + R P + + +Y+V+L + Sbjct: 121 VQFIMITLAFAQM---LFFLFVSLKAYGGEDGIIIRRTNALPGLNMRDKATLYWVVLTIA 177 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L + L ++ IR N++ +L KL+AF +S G+AGA A Sbjct: 178 VLFFLGLRRLINSSFGAVISGIRQNERRMAALGIPAYRYKLAAFVLSGMGAGLAGALMAN 237 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 SPDM ++++ ++ +VILGG+ +L + + + + ++ Sbjct: 238 FLRFASPDMMHWTKSGELMIMVILGGVGTLFGPFLGAGVFLMLETFLASWSEHW 291 >gi|170741352|ref|YP_001770007.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168195626|gb|ACA17573.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 442 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 117/316 (37%), Gaps = 32/316 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----SYVILGS 86 S +M + I ++FA ++++G GLLS + Y +GA+ + Sbjct: 47 QVFSGGTALTMLSLMGIAIVFALSYNMLLGQTGLLSFGHAVYYGLGAFFTVHAMNAVAAG 106 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 R + + ++ V A G++ G S + G A+ +L ++E+ + G Sbjct: 107 RLPIPLAVMPLVGAATGLGFGLVFGAVSTRRAGTVFAMISLGLAELVASGSHILHSFFGG 166 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + G+ + + R +I +YY++ G C + A ++ + RT + Sbjct: 167 EEGVT------------TNRTKMLRLFDLSFGPQIQVYYLIAGWCLICALLMYGITRTPL 214 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 +R+N + + +L AF +S+ F G+AGA A + + ++ +++ Sbjct: 215 GRLCNAVRENPERVEFIGYEPRTVRLIAFCLSAGFAGVAGALAAINFEIVNVSYLSLNQS 274 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 +V+ +GG+ ++ + + + + Sbjct: 275 GVVLLAAFIGGIGHFVGPVIGAVVVTILQVSLSDLTEVW---------------QLYFGL 319 Query: 327 ALFLVILMRSHSLLRL 342 +++ L L Sbjct: 320 LFIAIVMFAPGGLAGL 335 >gi|254304400|ref|ZP_04971758.1| branched chain amino acid ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324592|gb|EDK89842.1| branched chain amino acid ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 295 Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 91/306 (29%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95 I + IY + + G ++V G L++ IGAY+ + + GL +W Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPVWAT 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + +I G + + + + I+ LI + L Sbjct: 67 VIPAIIICALIGCLAERIAYRPLRNSPRISNLITAIGVSLFLENVFMKVFTPNTRSFPKI 126 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + ++ LS + L++++T A Sbjct: 127 FNQGPISF----------GNGINISFGAVVTIVTTLILSIGLQLFMKKTKYGKAMIATSQ 176 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S + + ++ +I P M I +L Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L F L +V+L + Sbjct: 236 GGIGILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282 Query: 336 SHSLLR 341 +L Sbjct: 283 PTGILG 288 >gi|111222941|ref|YP_713735.1| putative ABC transporter ATP-binding protein [Frankia alni ACN14a] gi|111150473|emb|CAJ62172.1| putative ABC transporter ATP-binding protein [Frankia alni ACN14a] Length = 930 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 113/303 (37%), Gaps = 19/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + I +Y + A + +V G G +S + + A+ + ++ V Sbjct: 347 LRDGLISTFVYAVIALSVVVVTGYAGQVSFAQLPLAGVAAFLVGPISEHLHIAFPFAPIV 406 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A+ + G+++GLP+L+ RG +A+ T ++ + + + ++ Sbjct: 407 AALGATVVGVVIGLPALRIRGLTVAVVTFALAFALEALWFRNLDFVGSSGAAVPNPEIFG 466 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V S F R V + + L WLR + + + +R N++ Sbjct: 467 WNLGVGSGSDFPRVTFGVVCLLVLVVVGLGVA---------WLRTSTLGSQMLAVRANER 517 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + ++ KL+AFA+ + G+ GA A ++ D F + V L G Sbjct: 518 SAAAAGVNVVRVKLAAFALGAFIAGIGGALLAYKFGNVTNDPFTAIVGLTFFGTVYLAGT 577 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 TS+S A ++ +L+ S + + + + L L ++ Sbjct: 578 TSVSGGLLAGVTVV----------NGLLYALVDKVVSTGVWYEAVAALLLILTVVFNPEG 627 Query: 339 LLR 341 ++ Sbjct: 628 VVG 630 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 85/269 (31%), Gaps = 7/269 (2%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 ++ ++ A L+I S G+++ + AY Y L S +++ P Sbjct: 7 FLLLGLGNGAVFGALALALTITYRSSGIINFATGSIALLAAYVYAYLRSGELINLIPGTP 66 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYV 152 + I G M LP L + ++ + Sbjct: 67 TTIDIGGDLPMGAALPIAVVLSALLGLGLHLVIFRPLRNAPPVAKAVASLGVSLAITALI 126 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 A R+ V + + + + Y+ + + L+A+I L RT A R Sbjct: 127 AARMGTTAVAVDPIFPTDLWKAGSINVPSDRVYLAITVLALAAAISLVFARTRFGLATRA 186 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 ++K + + + +SSA G+ G A I + + ++ Sbjct: 187 TASSEKGAYVSGISPDRIAAGNWMISSAAAGLVGILIAPIVPLI--PVSYTLFIVPALAA 244 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGM 301 I+G + A A ++ + + Sbjct: 245 AIMGRFQYVLWAAVAGIVIGALQSEAQYL 273 >gi|152994762|ref|YP_001339597.1| inner-membrane translocator [Marinomonas sp. MWYL1] gi|150835686|gb|ABR69662.1| inner-membrane translocator [Marinomonas sp. MWYL1] Length = 303 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 87/303 (28%), Gaps = 14/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y + AY I + P+ Sbjct: 8 LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMVSAYITAIALALLTFFGIESFPI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + S + I + Sbjct: 68 ILVGTLFLTVAVTGAYGWVIERIAYRPLRSSSRLSVLISAIGMSLILQNYVQLSQGANQQ 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + F FV +L + +++T + R + ++K Sbjct: 128 GVPTLLTGALRFHVGDGFVQITYMKLLILFISILGMGVLTYVIQKTKLGRMCRATQQDRK 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + + +AG + F I + +LGG+ Sbjct: 188 MASILGIDTDKVISTVFVIGAVMAALAGVLVTLDYGAFDFYV-GFIIGIKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L L++++R Sbjct: 247 GSLPGAMLGGLILGLSEALFAGLISSDYKDVFSFS-------------LLVLILIVRPSG 293 Query: 339 LLR 341 LL Sbjct: 294 LLG 296 >gi|160899918|ref|YP_001565500.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160365502|gb|ABX37115.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 320 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 126/294 (42%), Gaps = 15/294 (5%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + + L +F + + S ++LIY + A L++++G G+++L Sbjct: 12 ARFFWTVLALLALAVFPLVAPALGLDFYISFVRRVLIYALAATSLNLILGYGGMVALGHA 71 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + GAY+ IL S + P +A+++G G SL+ RG Y + TL ++ Sbjct: 72 AFFGAGAYAVGILAMNGVTSALVAWPAAALLAGLLAAATGAVSLRTRGVYFIMITLAFAQ 131 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + I I + +L P + +++ YYV+L + Sbjct: 132 MLFYIFISLRQYGG---------------EDGLNLPGHSVLPGLDLGHDVSFYYVVLALF 176 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + ++ L + A + +R+N+ SL + KL+AF +S A G+AGA A Sbjct: 177 AVLMAVFGRLVDSRFGKALQGVRENESRMESLGYPVYRIKLAAFVLSGAVAGLAGALLAN 236 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 ISP + ++++ ++ +V++GG+ +++ + E+ Y+ Sbjct: 237 HNLFISPSLMHWTQSANLLIMVLVGGVGLRWGGVAGAVVMLTLEEVLRMWTEYW 290 >gi|84500501|ref|ZP_00998750.1| possible branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] gi|84391454|gb|EAQ03786.1| possible branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] Length = 422 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 115/330 (34%), Gaps = 35/330 (10%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ + + L + T + + ++ Q+ I ++FA ++++G G+LS + + +G Y Sbjct: 26 ILIFVAIILAIPMTDPSRTMLTLIHQMAINIVFALAYNMLLGKGGMLSFGHAVYFGLGGY 85 Query: 80 SYVILGSR--------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + + + L + + G ++G S + G A+ +L ++E Sbjct: 86 FCMHVMNWIEEGSGIWGSYPTFFLPVMGFVAGGLAAAVIGSFSCRRAGTTFAMISLGVAE 145 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + + + + G+ GI + + +Y+ + Sbjct: 146 LVFSGAFMFDSLFGGEQGIN------------GDRMNGPEVFGLSMGPMQDIYWFMAFWT 193 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + + RT + RDN + + + F +S AF G+AG A Sbjct: 194 VVGIVAMYAFTRTPLGRLSEATRDNPQRVQFIGYNPTRVRWLVFTISGAFAGLAGGMSAV 253 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + + +P+ + V+ + +GG+T + +L + + + Sbjct: 254 NYEIFTPEALSLIPSGFVLIMAYVGGITYFAGPIMGAILLTYMSSMMSDFTEAW------ 307 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + ++++ + Sbjct: 308 ---------LLYLGLMFVIIVMYAPRGIAG 328 >gi|311107983|ref|YP_003980836.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310762672|gb|ADP18121.1| inner-membrane translocator 47 [Achromobacter xylosoxidans A8] Length = 629 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 124/304 (40%), Gaps = 33/304 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ + +ILI +FA L + G G+ S + +GAY +L + + Sbjct: 343 SPYLGILLTEILIAALFAASLHFLTGLAGMTSFGHAAWFGLGAYGAALLLKLAAVPMEAA 402 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + + ++ G ++ G YLA+ TL +++I + +W +T G G Sbjct: 403 LLLGPFAAALGALLFGWFCVRLSGVYLAMLTLAVAQILWALAYQWDDVTGGSNG------ 456 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 +PS+++ + YY+ L +C + + L + + A R +RD Sbjct: 457 ------------LIGLWPSAWLTQGPWFYYLTLALCVAGIAWLRRLAFSPLGYALRGVRD 504 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + +L + + F +S G+AG+ +A S+ I+PD S ++ + +V+L Sbjct: 505 SSLRAAALGMDTRRVQWAGFVAASFAAGLAGSLYAFSKGSIAPDTLAVSRSVDGLVMVLL 564 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ +L+ A + ++ Y+ ++ +A+ +++ Sbjct: 565 GGLQTLAGPLVGAASYTWLQDVAARSTEYWHA---------------VLGLAILALVMAF 609 Query: 336 SHSL 339 L Sbjct: 610 PEGL 613 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 87/291 (29%), Gaps = 13/291 (4%) Query: 51 MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIM 110 + A GLS++ G +++ Y +G Y +G + + Sbjct: 22 LVAAGLSLIFGVTRVVNFAHGSFYMLGIYLAWTFTGYFGDGAGYWAGLLLAALATGLIGA 81 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 L R Y A + F +LI +A R+ Sbjct: 82 AAEWLVLRRLYQAPELFQLLATFALVLIIGDA--------ALAIWGPEDLFAARAPGLSG 133 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 Y + ++ + + L L RT R +N+K +L + Sbjct: 134 AVQILGRRYPEYDLLLIAAGPVVLGLLWLLLMRTRWGRLLRAAAENRKMLAALGVNQAWL 193 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 SAF + + G+ GA A +V++GG+ S+ A + Sbjct: 194 FTSAFTLGAFLAGLGGALAAPRVPA--TLGLDLEIIASAFVVVVVGGLGSIPGAFLAALL 251 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + V L + + + + + +V+++R LL Sbjct: 252 ICSVKALFVFLGQVQIG---PWLFNLSKLTLLAEFAVMAVVLVVRPWGLLG 299 >gi|126668637|ref|ZP_01739589.1| ABC-type branched-chain amino acid transport system, permease component [Marinobacter sp. ELB17] gi|126626896|gb|EAZ97541.1| ABC-type branched-chain amino acid transport system, permease component [Marinobacter sp. ELB17] Length = 374 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 100/352 (28%), Gaps = 41/352 (11%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 L+ V + A Y ++ + L Y + A + +V G LG+LSL Sbjct: 20 FAALVIVTVLHVFTPQDSALHVSAYTVTLLGKYLCYALLAVAVDLVWGYLGILSLGHGAF 79 Query: 74 YAIGAYSYVILGSRYG-----------------------LSIWLLIPVSAMISGACGMIM 110 +A+G Y+ + R WL ++ + Sbjct: 80 FALGGYAMGMYLMRQIGDRGTYGDPVLPDFMVFLNWQELPWYWLGFDMAWFAFAMVLLAP 139 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 GL +L F + + + + + + + + Sbjct: 140 GLLALVFGFLAFRSRVTGVYLSIITQALTFALM----LAFFRNEMGFGGNNGLTDFRDIL 195 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 F + ++ + I + + + RD + L + Sbjct: 196 GFNLRTDATRLGLFLATGVALAIGFVICRGIVTSKLGRVAVACRDAEARTRFLGYRVERV 255 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 +L F +S+ G+AGA + I+P F +I ++ V LGG +L + Sbjct: 256 QLFVFVISAMLAGVAGALYVPQVGIINPSEFSPLFSIEIVVWVALGGRATLYGAVIGAVL 315 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + G+ + LV + + L Sbjct: 316 VNYAKTVLTGV--------------MPDAWLFALGGLFVLVTVFLPKGIAGL 353 >gi|187929778|ref|YP_001900265.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|187726668|gb|ACD27833.1| inner-membrane translocator [Ralstonia pickettii 12J] Length = 311 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 98/305 (32%), Gaps = 6/305 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G LG+++ +GA S + + L Sbjct: 8 IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMVGAMSALTAINFLQKYFPNLPDW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + + + + +A L + ++ + + Sbjct: 68 LTLVFALLFAMPVCAIVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L S+ ++L + +IL + RT + A R +NQ+ Sbjct: 128 LTFPQLLPSSPIDIGSTGATITGKEIVIILVSILVMVGLILLVNRTKLGRAMRATAENQR 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + F + +A +AG A + M F + + +LGG+ Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + L G + + I L V+L R Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLIGVLLFRPSG 301 Query: 339 LLRLR 343 ++ R Sbjct: 302 IMGER 306 >gi|138896566|ref|YP_001127019.1| branched chain amino acid ABC transporter permease [Geobacillus thermodenitrificans NG80-2] gi|196249269|ref|ZP_03147967.1| inner-membrane translocator [Geobacillus sp. G11MC16] gi|134268079|gb|ABO68274.1| Branched-chain amino acid ABC transporter (permease) [Geobacillus thermodenitrificans NG80-2] gi|196211026|gb|EDY05787.1| inner-membrane translocator [Geobacillus sp. G11MC16] Length = 292 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 97/288 (33%), Gaps = 11/288 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ + IG++ + G+ + + + Sbjct: 7 LVNGISLGSIYALIALGYTMVYGIVRLINFAHGDVFMIGSFVGFYAVTMLGVGFFPALLL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + GM + + K + IA LI + ++ G Sbjct: 67 AMAVCAVLGMTIERIAYKPLRNATRIAVLITAIGVSLLIEYVMIYLRGAQ---------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ V+ ++L L + + RT I A R + + + Sbjct: 117 PEAYPGTLLPKQNLELFGVVISSQSLFILGTSLVLMILLQFIVHRTKIGKAMRAVSHDAE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + FA+ SA G AG F +I P M + +LGG+ Sbjct: 177 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYTKIDPLM-GILPGLKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + +L + L G+ + + + F + + Sbjct: 236 GIIPGAMVGGLLLGVIESLVSGLGYSLWRDGVAFIILILILIFRPAGL 283 >gi|148508236|gb|ABQ76023.1| ABC-type branched-chain amino acid transport system, permease protein II [uncultured haloarchaeon] Length = 477 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 70/397 (17%), Positives = 132/397 (33%), Gaps = 62/397 (15%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ-ILIYVMFAWGLSIVVGSLGLLSLNCV 71 L + Y L+ + + Q ++ I ++ M A L++ G GL ++ V Sbjct: 24 ATLAATYLAYVLIGIGLGYSLRGQLNTIAVLTFYIGVFAMLALALNLHWGYTGLFNIGIV 83 Query: 72 IAYAIGAYSYVILGSRYGL------------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119 A+G Y ++ + + I + + G+++ LP+L+ R Sbjct: 84 GFMAVGIYVMALVSKPVYQAGGASQVGGLGLPVIIGIIAGMIAASLLGLLIALPALRLRA 143 Query: 120 DYLAIATLIMSEIFQNILI-----------KWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 DYLAI T+ MSEI + + + G I L + L Sbjct: 144 DYLAIVTIAMSEIVRFSFLSGQLQQFNLAGRRVGFGGGSGLILDYTDPLELFFSFFGLWD 203 Query: 169 FFRFPSS-----------FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + V+ + VLL L ++ + + IR+++ Sbjct: 204 AYLGLVETFGIIIPNNPKPVVDGLVYGAVLLSFVGLYFWLLKRTGESPFGRVLKAIREDE 263 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +A SL K+ AF + A +G+AG + ++P+ F+ V +I+GG Sbjct: 264 EAASSLGKDTNGFKIKAFMLGCALMGLAGILWFMRSGAVTPNTFRPRITFFVWIALIIGG 323 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN-------------------- 317 S + AI ++ +++L S + Sbjct: 324 AGSNTGSVLGGAIFAALLYQGPRYLKNLIDTVLPSASSPSSFGPAIAPLISNLDITPLLF 383 Query: 318 -------MRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 M + L ++ R LL RT + Sbjct: 384 YTIDNIRQLQLVFMGVVLIWLMHNRPEGLLGHRTETA 420 >gi|288931422|ref|YP_003435482.1| branched-chain amino acid ABC transporter permease [Ferroglobus placidus DSM 10642] gi|288893670|gb|ADC65207.1| inner-membrane translocator [Ferroglobus placidus DSM 10642] Length = 324 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 125/335 (37%), Gaps = 40/335 (11%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L+ + + + + ++++ I+VG G ++L + +GA Sbjct: 8 LIGLIGLIVALTLPFYTPEGYLFLFGMLFLFLILVLSWDIIVGYTGQVNLGHTVFVGLGA 67 Query: 79 YSYVIL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 Y+ +L S + +L I + +++ G +G +L+ +G Y A+ Sbjct: 68 YTAALLQVPSRFESFSSALASMPPQNQFLSILIGGIVAALFGAAIGFVTLRLKGYYFALV 127 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 T I+ +F + + + G+ G + + + YY Sbjct: 128 TAILPLVFIQTVYVFSDVFGGEEGFSI------------------GLERALSQSPVVRYY 169 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 V + L + ++ ++ + + +RD+++ +L ++ K+ AF +SS F G+A Sbjct: 170 VAFAVFLLCFLAMRYIVKSDLGYRFMAVRDDEELAEALGIDVVKYKVLAFTISSFFAGVA 229 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA R + PD++ +++I +LGG+ +L I+ + L Sbjct: 230 GATIVLYRITVGPDLYDIPLMLMIILSAVLGGLGTLYGPLIGGIIVYLLKNLF------- 282 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + ++ L V L+ L Sbjct: 283 --LKTMIPQGAFVNDEIVLYAILIAVALLSPEGLW 315 >gi|254453080|ref|ZP_05066517.1| urea ABC transporter, permease protein UrtC [Octadecabacter antarcticus 238] gi|198267486|gb|EDY91756.1| urea ABC transporter, permease protein UrtC [Octadecabacter antarcticus 238] Length = 368 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 105/340 (30%), Gaps = 26/340 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L V++ ++LF F Y ++ + L + + L++ G+ G+L+L + Sbjct: 9 LVALLVLFIIVLFGFPTFLGFDGYELNLYSRYLSLGIVSMALALSWGTTGILNLGQAATF 68 Query: 75 AIGAYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 IG+Y + +W + V + L + Sbjct: 69 GIGSYIMAMHLKIKGSADLPDFMVWNNVDVLPWFWVPFHSLSFTLVAGLLIPALVGGLIG 128 Query: 129 MSEI------FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 + +I + + + + L F + Y I Sbjct: 129 VFMFRARISGVFVAVITLAFLVAFQLLVVNYQGYTGGQNGLTGLAPLTLFGWTVDTYSIQ 188 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY++ G + I L+L + R IR++ + + F +S+A Sbjct: 189 FYYLVAGCLIAALVIGLYLVHSKFGLILRAIREDANRTRFFGYNVASYETVIFCISAALA 248 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G +G + SP S ++ ++ +GG S+ A I+ + + Sbjct: 249 GWSGMLYTLVLQFASPTYMSVSFSLGIVIWCAVGGRNSVIAAAVGAIIVNILQGKLSDV- 307 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ LV+L L L Sbjct: 308 -------------YVEGWHMMLGATFVLVVLFMPRGLHGL 334 >gi|187479501|ref|YP_787526.1| ABC transporter permease [Bordetella avium 197N] gi|115424088|emb|CAJ50641.1| ABC-transporter, permease protein [Bordetella avium 197N] Length = 317 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 123/279 (44%), Gaps = 15/279 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 F + S ++LIY + A L++V+G G+++L + GAY+ IL S Sbjct: 18 FPLFAPAMGLDFYISFVRRVLIYALAATSLNLVLGYGGMVALGHAAFFGAGAYTVGILAS 77 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 S+ + P + +++G ++G SL+ RG Y + TL +++ I I + Sbjct: 78 GGVTSVLAVWPAAVLLAGVLAWVIGAISLRTRGVYFIMITLAFAQMVYFIFISLRQYGG- 136 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +L + P + ++ YYV+L + + + L + Sbjct: 137 --------------EDGLNLPGYSTLPGLDLGNDVTFYYVVLAVFVVVMYVFNRLVASRY 182 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A + +R+N+ +L + KL+AF +S A G+AGA A ISP + ++++ Sbjct: 183 GEALQGVRENESRMEALGYPVYRIKLTAFVLSGAAAGLAGALLANHNLFISPSLMHWTQS 242 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 ++ +V++GG+ ++++ + EL Y+ Sbjct: 243 ANLLIMVLVGGIGLRYGGVVGASVMLLLEELLRQWTEYW 281 >gi|160939124|ref|ZP_02086475.1| hypothetical protein CLOBOL_04018 [Clostridium bolteae ATCC BAA-613] gi|158438087|gb|EDP15847.1| hypothetical protein CLOBOL_04018 [Clostridium bolteae ATCC BAA-613] Length = 293 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 97/307 (31%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IG+Y + S GL + Sbjct: 5 NYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGSYVVFVTVSTMGLPPMAGV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + GM + + K +A LI + +L + G + Sbjct: 65 LLAVAVCTLLGMTIERIAYKPLRGASPLAVLITAIGVSYLLQNVALLIFGADTKSFTSVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +L + + ++ ++ A + ++ Sbjct: 125 TLPAIKLAG---------GEMTITGETIVTILSCIVIMIGLTAFINKSKAGQAMLAVSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +AG ++ ++P I + G Sbjct: 176 RGAATLMGINVNGTIALTFAIGSALAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + + F L +V+L++ Sbjct: 235 GIGSIPGAFIGGILLGVIEILSKAYISSQMSDAIVFS-------------VLIIVLLVKP 281 Query: 337 HSLLRLR 343 +L + Sbjct: 282 TGILGKK 288 >gi|323526785|ref|YP_004228938.1| inner-membrane translocator [Burkholderia sp. CCGE1001] gi|323383787|gb|ADX55878.1| inner-membrane translocator [Burkholderia sp. CCGE1001] Length = 440 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 105/312 (33%), Gaps = 27/312 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Q ++ + Q ++FA ++++G GLLS GA + +R G+ + LL Sbjct: 49 QSWLLAYLAQTATMIVFALSYNLLLGETGLLSFGHAAYAGFGALIAAQVFNRAGVPLALL 108 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + + CG ++G + + G A+ TL + E+ G+AG+ + Sbjct: 109 PLIGGIGAALCGALLGFIATRRAGTAFAMITLGIGELVSAAAWSLPDWFGGEAGVAI--- 165 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 F + Y ++ C L+++ + L RT +RD Sbjct: 166 ---------DRASGPTFGAWTFGPAREAYTLIALWCLLASAAMFALSRTPFMRLANAVRD 216 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N ++ + +S+ F G+AG + + +S + + V+ ++ Sbjct: 217 NPARAAAIGCYPRRIRHGVVVMSAFFAGVAGTLALINVELVSTESVSMVRSGSVLIATVI 276 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG + +L + + + + ++++ Sbjct: 277 GGTGAFFGPVAGAVVLTFFSVAVASVTRAW---------------LFYLGLLFIVIVVTS 321 Query: 336 SHSLLRLRTPSN 347 L Sbjct: 322 PDGLAGFAERHA 333 >gi|261366988|ref|ZP_05979871.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Subdoligranulum variabile DSM 15176] gi|282571105|gb|EFB76640.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Subdoligranulum variabile DSM 15176] Length = 297 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 109/307 (35%), Gaps = 19/307 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IG+Y G++ L I Sbjct: 5 SYLINGISLGSVYALIALGYTMVYGIAKMLNFAHGDVIMIGSYVVFFTFGTSGMNPILSI 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +S ++ G+++ + + + ++A LI + +L + +T + + Sbjct: 65 LLSMVVCTVLGVVIERVAYRPLREAPSLAVLITAIGVSYLLQQVAQLTWSSSPKSFISVI 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++ + ++ + A +I ++ T+ +A + ++ Sbjct: 125 SGI-----PFLQPISLFDGQLTISAETIVTIVVCIVIMAVLIWFVNNTSAGHAMLAVSED 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +AGA +S + P I + G Sbjct: 180 RGAAQLMGVNVNATISLTFAIGSALAAVAGALLCSSYPTLQPTT-GAMPGIKAFVAAVFG 238 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + ++ + L +V++++ Sbjct: 239 GIGSIPGAFLGGILLGVIENLSKAYISTQLSDA-------------IVFLVLIVVLIVKP 285 Query: 337 HSLLRLR 343 LL + Sbjct: 286 TGLLGKK 292 >gi|90414543|ref|ZP_01222517.1| ABC transporter permease protein [Photobacterium profundum 3TCK] gi|90324350|gb|EAS40916.1| ABC transporter permease protein [Photobacterium profundum 3TCK] Length = 382 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 99/344 (28%), Gaps = 33/344 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A+ LL + Y S+ + L Y + A + +V G LG+LSL +A+G Sbjct: 46 FAIPALNLLLPQGHFFHIETYTISLLGKYLTYALLAMAVDLVWGYLGILSLGHGAFFALG 105 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ + R + + LP D A L++ + + Sbjct: 106 GYAMGMYLMRQIGDRGVYGNAELPDFMVFLNLQELPWFWQGFDMFWFACLMVVLVPGLLA 165 Query: 138 IKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 + + + + + + + Sbjct: 166 WCFGYLAFRSRVSGVYLSIMTQALTFALMLAFFRNEMGFGGNNGLTDFKDILGYSLQADS 225 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 +I ++ + L + + + + +RD + + + K+ F +S Sbjct: 226 TKITLFVASVIALILGYLVCRIVISSRLGRVAIAVRDAESRVRFMGYNVDNIKVCIFILS 285 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + G+AGA + I+P F +I ++ V LGG +L + Sbjct: 286 AVLAGIAGALYVPQVGIINPGEFAPLNSIEIVVWVALGGRATLFGAIIGAVTINYAKSW- 344 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F F + L L + L Sbjct: 345 -------------FTIEFPEVWLFALGSMFVLATLFLPKGITGL 375 >gi|297538551|ref|YP_003674320.1| urea ABC transporter permease UrtC [Methylotenera sp. 301] gi|297257898|gb|ADI29743.1| urea ABC transporter, permease protein UrtC [Methylotenera sp. 301] Length = 397 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 97/348 (27%), Gaps = 36/348 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L+ + + + ++ + L Y A L ++ G+ G+LSL I + Sbjct: 14 GLVGLAVLAAIIFVALPLGVDIFRLNLVGKYLTYAFVAVSLVLLWGNGGILSLGQGIFFG 73 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG-----LPSLKFRGDYLAIATLIMS 130 +G Y + + F+ L I ++ Sbjct: 74 LGGYGMAMFMKLEASDPITTKIQTTPGIPDFMDWNQITSLPWFWEPFKSLPLTILIILTI 133 Query: 131 EIFQNILIKWKPITNGKAGIYVA-----------------DRLYFLGTTVRSLIRFFRFP 173 LI + G+Y A + L + + Sbjct: 134 PALFAYLIGFAMFKRRVGGVYFAIITQAIALILSILIVGQQGFTGGVNGITDLKTVWGWD 193 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + + +YY+ + F + + ++ + +RD ++ + K+ Sbjct: 194 TRNDSAKYILYYLNGFLLFGAILLSKYVLNSKFGMLLLAMRDKEERVRFSGYDVSNFKIF 253 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 F +++ + GA F +SP +I ++ +GG SL T + Sbjct: 254 IFCLAAMISAVGGAMFTLQVGFMSPSFVGIVPSIEMVIFCAVGGRASLIGAVYGTLFVNF 313 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F S+ +M V++ L Sbjct: 314 GKTF--------------FSESYPELWLFIMGGLFIAVVMFFPDGLAG 347 >gi|229591289|ref|YP_002873408.1| putative branched-chain amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229363155|emb|CAY50195.1| putative branched-chain amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] Length = 349 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 66/330 (20%), Positives = 132/330 (40%), Gaps = 16/330 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + L F+ + + +++++ I L+ + GL+++ G G S+ Sbjct: 19 IPWALIGLLALAFIAVPLWGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFM 78 Query: 75 AIGAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 A+GA+ +Y L L + + + +IS G++ GLPS + +G YL + TL Sbjct: 79 AVGAFATYGFLLRLPELGLPVALLGGGVISALVGLLFGLPSSRIKGFYLMVTTLAAQFFL 138 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + +K+ N + ++ L + + Y + L L Sbjct: 139 EWLFVKFPWFYNYGSSGTISAPKLALFGH-------------DLNTPLGRYLLTLVTVLL 185 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-AS 252 + L R+ + W IRD A + ++ K AFAVSS ++G+AGA +A A Sbjct: 186 LTWTAINLVRSQVGRNWMAIRDMDTAAAVVGIPVVRYKRLAFAVSSFYLGIAGALWAFAY 245 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 S F + + ++ I+I+GGM S++ A + + F + Sbjct: 246 LGTASASSFDINRSFQILFIIIIGGMGSIAGNFVGAAFISLLPIFLSHAGQALFGGAVDA 305 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + ++ L+RL Sbjct: 306 G-QLQNLQKIIFGVLIIVFLIKEPEGLIRL 334 >gi|22126878|ref|NP_670301.1| branched chain inner membrane ABC transporter permease [Yersinia pestis KIM 10] gi|45440786|ref|NP_992325.1| branched-chain amino acid ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|21959912|gb|AAM86552.1|AE013901_13 putative branched chain inner membrane permease of ABC transporter [Yersinia pestis KIM 10] gi|45435644|gb|AAS61202.1| putative Branched-chain amino acid transport system, permease component [Yersinia pestis biovar Microtus str. 91001] Length = 538 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 81/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ S + + + +I+ + Sbjct: 265 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQFAPHWLALYPLIALPVAFFITAGIGMA 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W GI + L + + + Sbjct: 325 LER--TVIRHLYGRPLETLLATWGISLMLIQGIRMLFGPQNLEVANPAWLSGGVQVLPNL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 383 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 443 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 501 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 535 >gi|94311415|ref|YP_584625.1| inner-membrane translocator [Cupriavidus metallidurans CH34] gi|93355267|gb|ABF09356.1| leucine/isoleucine/valine transporter subunit, membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 308 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 91/297 (30%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90 + + IY + A G ++V G +G+++ Y IGAY G L Sbjct: 12 LVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGAQAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS ++G G + + + + LI + L + I G Sbjct: 72 VLGAALIVSVAVTGCYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + I F V ++ L + L++ + + A Sbjct: 129 ----RDVSVPILISGAIEFQMGGDFTVTVPYSRLLIVGVTLVLMIVLTLFIGHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ + L F + + + G + +++ F I Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLN-PFIGFIAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L G + ++ F + + Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFGLLVLVLLFRPTGLL 300 >gi|229029665|ref|ZP_04185741.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus AH1271] gi|228731669|gb|EEL82575.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus AH1271] Length = 317 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 130/331 (39%), Gaps = 31/331 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + ++ + + +IS I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFFIGLVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F YYV L + ++ Sbjct: 122 RGLTHGGDGFTFGVPDLFRDRF-------------------TFYYVTLICLIVIFILLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVATISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + + Y+ S L R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATAYPIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T ++ + +V+L+ L+ +++ Sbjct: 274 TIILGLLYIIVLLVFPKGLVGTIKRLKNVKQ 304 >gi|238788788|ref|ZP_04632579.1| Branched-chain amino acid transport system, permease component [Yersinia frederiksenii ATCC 33641] gi|238723093|gb|EEQ14742.1| Branched-chain amino acid transport system, permease component [Yersinia frederiksenii ATCC 33641] Length = 533 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 80/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ S + + + +I+ + Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQHVAPHWLALYPLIALPVAFFITAGIGMA 319 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQSVRMIFGAQNLEVANPAWLSGGVQILPSL 377 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 378 VLPWNRIAVIAFVVIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 437 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 438 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 496 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530 >gi|237745225|ref|ZP_04575706.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. 7_1] gi|256026672|ref|ZP_05440506.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. D11] gi|289764669|ref|ZP_06524047.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. D11] gi|229432454|gb|EEO42666.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. 7_1] gi|289716224|gb|EFD80236.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. D11] Length = 295 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 92/306 (30%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95 I + IY + + G ++V G L++ IGAY+ + + GL +W+ Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPVWVT 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + +I G + + + + I+ LI + L Sbjct: 67 VIPAIIICAIVGCLTERIAYRPLRNSPRISNLITAIGVSLFLENLFMKIFTPNTRSFPKI 126 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + I ++ LS + L++++T A Sbjct: 127 FNQAPISFGANIH----------INFGAVVTIVVTLILSIGLQLFMKKTKYGKAMIATSQ 176 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S + + ++ +I P M I +L Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L F L +V+L + Sbjct: 236 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282 Query: 336 SHSLLR 341 +L Sbjct: 283 PTGILG 288 >gi|282857289|ref|ZP_06266527.1| inner-membrane translocator [Pyramidobacter piscolens W5455] gi|282584869|gb|EFB90199.1| inner-membrane translocator [Pyramidobacter piscolens W5455] Length = 334 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 93/307 (30%), Gaps = 14/307 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ S Y + A G ++V G L L++ + + V + + +++ + Sbjct: 35 PYLLSGISVGGQYALIAIGYTMVYGILRLINFAHGDVFMVAGILMVYISAAVP--LYISV 92 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 PV +++ G + + + ++ +I + L G + Sbjct: 93 PVVLILTAVIGFFIERIAYRPLRSAPRMSAMISAIGVSYTLQNLVLYITGGLNQFYPKVP 152 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + S + FL+A +++ + RT + A R + + Sbjct: 153 FISD----------SIRLSGATTTMVTVITPFLTIFLTALLVMLINRTKLGMAMRAVSKD 202 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + I + F + S + + + + + + G Sbjct: 203 FETSLLMGIKIDRVISATFVIGSFLAAVGSVLYFTNYSTVIQTS-GAMPGLKAFVAAVFG 261 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMR 335 G+ S+ I+ L G++ F + L +++L++ Sbjct: 262 GIGSIPGAVIGAFIIGICENLIKGLDVILFRLGFIAKPLGLATFSDAFTFALLIVILLVK 321 Query: 336 SHSLLRL 342 L Sbjct: 322 PTGLFGE 328 >gi|332085348|gb|EGI90520.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella boydii 5216-82] Length = 509 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 95/303 (31%), Gaps = 16/303 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F + M L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILALLSAAMFFVLAG 303 Query: 331 VIL 333 V + Sbjct: 304 VFM 306 >gi|237731475|ref|ZP_04561956.1| inner-membrane translocator [Citrobacter sp. 30_2] gi|226907014|gb|EEH92932.1| inner-membrane translocator [Citrobacter sp. 30_2] Length = 357 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 98/333 (29%), Gaps = 27/333 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L + ++ +IL Y + A L +V G G+LSL I +A+G Y+ Sbjct: 33 FLALLPAEHPLAISVWTLTLAGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92 Query: 83 IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + S S +++ L + A Sbjct: 93 MYLMRQASGEGLPAFMSFLSWSELPWFWWGTQHFLWAMLLVVLVPGLLALVFGWFAFRSK 152 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + ++ G + + + FP + I ++ + Sbjct: 153 IKGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTGFTTILGFPVTATSTRIALFLATVM 212 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ + L L R+ +RD + KL + +S+ G+AGA + Sbjct: 213 LLVLAIWLGLALARSKFGRILTAVRDAENRLMFCGYDPKGFKLLVWTLSAVLCGLAGALY 272 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I+P + +I V LGG +L ++ G L Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVFGAVLVNGAKSL------------ 320 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + V L ++ L Sbjct: 321 --FTVIMPEYWQLFLGLIFIGVTLFLPRGVIGL 351 >gi|328950534|ref|YP_004367869.1| ABC-type transporter, integral membrane subunit [Marinithermus hydrothermalis DSM 14884] gi|328450858|gb|AEB11759.1| ABC-type transporter, integral membrane subunit [Marinithermus hydrothermalis DSM 14884] Length = 452 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 102/314 (32%), Gaps = 17/314 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 L S + S + I+ + A L+++ G LG+LSL IG Y +L Sbjct: 20 IYILTQLPSAGGLVSALTLVFIWGIAAISLNLINGQLGILSLGHHGFMLIGGYVTALLVL 79 Query: 87 RYGLSIWL----------------LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + + + A + + Sbjct: 80 PEQERSPFRTRLLSEWARENLDLDKWLRGLGLDFLANSMDAKFIIALLIAGAAASLVGFI 139 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F ++ +K + G RL V + + + + Sbjct: 140 VGFPSLRLKGDYLAIVTFGFGEIIRLLPSTPEVARFTNGP-LGIKGIPADAGSIWWAFTV 198 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L+ L+ ++ A+ IR+++ A ++ + + K+ AF +S+ F G+AG +A Sbjct: 199 FVLTIFFFSRLKYSSYGRAFEGIREDEIAAEAMGVNLAYHKVLAFTISAFFAGVAGGMYA 258 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + F F ++ + LGG+ S++ TAI++ V + Y S Sbjct: 259 SYLQSVDTQTFNFFVTFFLLVAISLGGLGSITGAILGTAIVVLVRIYGGFLEQPYPLSYA 318 Query: 311 KFDCSFNMRHTTLM 324 + M Sbjct: 319 FYTLGGLMLLAFGF 332 >gi|260495472|ref|ZP_05815598.1| urea ABC transporter, permease UrtB [Fusobacterium sp. 3_1_33] gi|260197009|gb|EEW94530.1| urea ABC transporter, permease UrtB [Fusobacterium sp. 3_1_33] Length = 295 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 92/306 (30%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95 I + IY + + G ++V G L++ IGAY+ + + GL +W+ Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPVWVT 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + +I G + + + + I+ LI + L Sbjct: 67 VIPAIIICAIVGCLTERIAYRPLRNSPRISNLITAIGVSLFLENLFMKIFTPNTRSFPKI 126 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + I ++ LS + L++++T A Sbjct: 127 FNQAPISFGANIH----------INFGAVITIVVTLILSIGLQLFMKKTKYGKAMIATSQ 176 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S + + ++ +I P M I +L Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L F L +V+L + Sbjct: 236 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282 Query: 336 SHSLLR 341 +L Sbjct: 283 PTGILG 288 >gi|171741089|ref|ZP_02916896.1| hypothetical protein BIFDEN_00155 [Bifidobacterium dentium ATCC 27678] gi|283455533|ref|YP_003360097.1| branched-chain amino acid transporter permease [Bifidobacterium dentium Bd1] gi|306823419|ref|ZP_07456794.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|171276703|gb|EDT44364.1| hypothetical protein BIFDEN_00155 [Bifidobacterium dentium ATCC 27678] gi|283102167|gb|ADB09273.1| Branched-chain amino acid transport system permease protein [Bifidobacterium dentium Bd1] gi|304553126|gb|EFM41038.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] Length = 309 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 99/304 (32%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G + L++ +G+Y ++ L + Sbjct: 13 IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYVLMLTI-----PFILACGL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A ++ +++ + ++ + G + Sbjct: 68 PAWLAVVPAILVCVAVGVIVEKAAYKPVREKGNNMTALITAIAMSLLLENGSQAIFGADY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V ++I+ + + +L + ++ L++ T A R + ++++ Sbjct: 128 QT--VPTVIQIPTLALGGLKIDGATILTVLLGLVIMVALQLFVTYTKQGKAMRAVSEDKE 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +A + S ++S M + +LGG+ Sbjct: 186 ASILMGINVNSTITLTFAIGSGLAAVASLMYCVSYPQVS-PMMGAMLGLKAFVAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V L ++ S ++ L +V+L++ Sbjct: 245 GSIPGAMVGGLVIGVVESLTKAYIGTITAGVITSAFSDA-----IVFGILIIVLLVKPSG 299 Query: 339 LLRL 342 L+ Sbjct: 300 LMGE 303 >gi|309779309|ref|ZP_07674071.1| branched-chain amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308921867|gb|EFP67502.1| branched-chain amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 323 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 115/302 (38%), Gaps = 33/302 (10%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ ++L+Y M ++++G GLLS I + +G+Y+ I ++ L + + + ++ Sbjct: 33 TLATEVLVYAMAVMACNVLLGYTGLLSFGQGIFFGLGSYAVGIGLTQLALPMPVALVLAV 92 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++ ++G +++ RG Y + TL S++F + +T G G+ R Sbjct: 93 VVGAVVAAVVGWFAIRQRGTYFVMLTLAFSQMFYFLAYTTPSLTGGDNGLLDIPRP---- 148 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 +F Y + + + ++ + + IRDN++ Sbjct: 149 --------------AFAASPWAFYAFVAALFLVVFFLVQRVTESVFGRTLLAIRDNEERA 194 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + KL AF +S A G+AGA A + + +++ + ++GG + Sbjct: 195 LAVGYNVRAFKLLAFVISGAVTGLAGALHAMLTGIAPLANIDYHVSEMILVMTVIGGTGN 254 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + A + + + + + L+ L V L L Sbjct: 255 VFASVLGAAFYVLLSDWLSSLWPRW---------------LMLLGFLLIAVSLFMQRGLF 299 Query: 341 RL 342 L Sbjct: 300 GL 301 >gi|258405260|ref|YP_003198002.1| inner-membrane translocator [Desulfohalobium retbaense DSM 5692] gi|257797487|gb|ACV68424.1| inner-membrane translocator [Desulfohalobium retbaense DSM 5692] Length = 286 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 88/303 (29%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + Y + A G S++ G LGL++L Y GA+ I + GL + L + Sbjct: 6 IVNGIVAGSAYALVALGYSLIYGVLGLINLAQGEIYMAGAFGLWIAAAVLGLPLPLAVLF 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + S G+ M + + L+ + L + G Sbjct: 66 GLLFSAVVGLSMERVVFRPLTGRHPLIPLLAAIGLSIFLQSVALLAFGPE---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V ++ L + ++ + A + + +++ Sbjct: 116 -TRPFPLEFEPQLWNLGPVTLSTLQLLLVTTALALMGGLFWYVHASRHGQALQAVAMDRE 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + AF + G AG AA + + + +LGG Sbjct: 175 AARLVGIKPHQCVAQAFGIGGMLSGAAGMMMAAYYN-ATYPYMGVLPGLKGFCAAVLGGA 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL L F F L ++L+R Sbjct: 234 GSIPGAILGGLILGLSENLGAAYIHSGFKDGYAF-------------AILIAILLLRPQG 280 Query: 339 LLR 341 LL Sbjct: 281 LLG 283 >gi|218887694|ref|YP_002437015.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758648|gb|ACL09547.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 302 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 95/299 (31%), Gaps = 17/299 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY + A G ++V G + L++ Y +GA++ +I+ G+ + + + + Sbjct: 14 LTRGSIYALIALGYTMVYGIIELINFAHGEVYMMGAFTALIVAGALGIYGFPALAILIIA 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + L + LI ++ + + Sbjct: 74 AVVAVIYCAAYGLTLEKIAYKPLRDA---PRLSPLISAIGMSIFLQNYVILAQTSDFMPF 130 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + I +++ A++ L+++ T + A R N+K Sbjct: 131 PNLVPQPDFLEPIAHIMGASEVLIIVTSAISMAALTLFIKYTRMGKAMRATAQNRKMAML 190 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L F + S+ + G A+ +++ F I + +LGG+ S+ Sbjct: 191 LGIDADKVISLTFVIGSSLAAVGGVLIASHVGQVNF-AIGFIAGIKAFTAAVLGGIGSIP 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +L G + L F L L+++ R +L Sbjct: 250 GAMLGGLVLGWCESFATGYISSDYEDALAF-------------ALLVLILIFRPSGILG 295 >gi|116248771|ref|YP_764612.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253421|emb|CAK11809.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 361 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 115/313 (36%), Gaps = 19/313 (6%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + IL ++ A +++ G GL+S+ + GAY+ +G+ Sbjct: 35 PFIVARGVIQDLFFILTMLVLAQNWNLLAGYAGLISVGQQVFVGFGAYTMFGCVILFGVD 94 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + I ++ + S A + + + G Y AI T +++E+ + +L +WK + G Sbjct: 95 PVVAILIAGVFSVALAIPTAFFTFRLYGPYFAIGTWVVAEVVRLLLAQWKALGGGTG--T 152 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 R +R + + Y++ L + + I L R+ Sbjct: 153 SLPREATRDMMGVGAMRDLFGMKASEAGDALTYWLALILAVATIGFIYGLLRSKQGLGLA 212 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK--FSENIIV 269 +RDN++A +L K + ++ G+AGA + RISPD V Sbjct: 213 AVRDNEQAARALGVDARRMKTLVYLATAFMTGIAGALIYVQKARISPDAAFSVTDWTAYV 272 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 I IV++GG+ ++ I + L + ++ + Sbjct: 273 IFIVVIGGIGTIEGPILGVIIFFLLQNLLADY---------------GSWYLLMLGLLGI 317 Query: 330 LVILMRSHSLLRL 342 ++L+ L L Sbjct: 318 AIMLLAPRGLWGL 330 >gi|160897996|ref|YP_001563578.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160363580|gb|ABX35193.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 355 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 114/325 (35%), Gaps = 11/325 (3%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 ++ ++LI+V+ +++G G++S + + IGAY I SR G Sbjct: 31 PFVFPGVKALNVAAKVLIFVVLVASFDLLLGYTGIVSFAHTMFFGIGAYGVAIASSRMGA 90 Query: 91 SIWLLIPVSAMISGACGMIMG---LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 L ++ L SL+ R + A+ TL ++ FQ + + T G+ Sbjct: 91 GWGALALGLGAALLVSLLLSLAIGLFSLRVRAIFFAMITLAVAAAFQTLASQLSEWTGGE 150 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ + + I YY+L + + +L + + Sbjct: 151 DGLSFKLPEWLSPSFEPFENEVLGVLIDG---RIITYYLLFVLAVVLVLALLRIVNSPFG 207 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSEN 266 + IR+N+ ++ ++ + + +S+ F +AGA A F Sbjct: 208 RVLQAIRENEFRAEAIGYRVVVYRTLSSVLSALFACVAGAMLALWLRYNGPDTSLSFEIM 267 Query: 267 IIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + IV++GGM ++ A + + + + +L + + R Sbjct: 268 MDCLLIVVIGGMGTIYGAAIGSVLFLIAQSYLQDLLRVASEAAHSLPWLAALLSPDRWLL 327 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + + L + ++ S Sbjct: 328 WLGVLFVLSVYYFPTGVVGRLRSSR 352 >gi|294499668|ref|YP_003563368.1| putative branched-chain amino acid ABC transporter permease [Bacillus megaterium QM B1551] gi|294349605|gb|ADE69934.1| putative branched-chain amino acid ABC transporter, permease protein [Bacillus megaterium QM B1551] Length = 328 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 92/315 (29%), Gaps = 18/315 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G ++V G L L++ + GA+ + W+ Sbjct: 13 LIDGLTLGAVYAIIALGYTMVYGILELINFAHGEIFMSGAFIGTAILIGLTGVGWIAAFP 72 Query: 99 SAMI------------SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + + I + R I + + + + IT Sbjct: 73 AVVTLILVLLITSVATGFLGMGIERVAYRPLRKSSKLITLITAIGMSFLLQDFVRFITEL 132 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 K G Y+ + V +++ VLL L + +++ RT Sbjct: 133 KNGNYIVNTPALFSGKVSVSASSLSSLFDDATFKVTFIVVLLVAFCLMIGLEIFVNRTKW 192 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A R + + ++ + F + SA G G FA I P F Sbjct: 193 GMAMRAVAQDPDTASLMSINVNKVISLTFFIGSALGGATGVLFALHYGTIDPY-IGFILG 251 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + + +LGG+ ++ +L + ++L Sbjct: 252 LKAFTAAVLGGIGNIRGAMFGGLMLGILEMFAAANLSTITGNVLG-----AEYKDVFAFA 306 Query: 327 ALFLVILMRSHSLLR 341 L LV++ + L Sbjct: 307 ILILVLIFKPEGLFG 321 >gi|51892754|ref|YP_075445.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51856443|dbj|BAD40601.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 332 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 71/322 (22%), Positives = 123/322 (38%), Gaps = 41/322 (12%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY--- 88 A Y + LI + A GLS++ G G SL Y +GAY + + Sbjct: 28 AGFIGIYWGQIMDLALITTIQAVGLSLIYGFAGQFSLGHAAFYGLGAYVAAFVTRAFGGN 87 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT---N 145 L+ L + A +G +++GLP L+ R DYL IATL I + +L ++ Sbjct: 88 TLTFALALAAGAATAGLVALLIGLPILRLRSDYLGIATLGFGIIVKVLLDNADKLSPVLG 147 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G G+ RL + + LS + L R++ Sbjct: 148 GARGMAGIPRLTTFH-------------------------WVFWLAVLSVWLARNLVRSS 182 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + +R+++ A + K AF V A G+AG +A + P F F + Sbjct: 183 HGRSCIAVREDEVAADIMGLDTTQFKTLAFVVGCAMAGLAGGLYAHLYSFLHPSSFDFLK 242 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + V+ +V+LGG+ SL+ + ++E G+ F + Sbjct: 243 SFDVLLVVVLGGLGSLTGTVVTAIGWVFLLEALRGV----------LGQQFLDWRGVVYA 292 Query: 326 IALFLVILMRSHSLLRLRTPSN 347 + L +++++R L+ R S Sbjct: 293 LVLIVLMILRPQGLMGGREISL 314 >gi|299769972|ref|YP_003731998.1| branched chain amino acid ABC transporter [Acinetobacter sp. DR1] gi|298700060|gb|ADI90625.1| branched chain amino acid ABC transporter [Acinetobacter sp. DR1] Length = 356 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 136/328 (41%), Gaps = 16/328 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + L+ FLF+ +++ + L+ + GL+I+ G G LSL A+ Sbjct: 28 ILFIFALLIAFLFVPFLGPDYLFNAILVPFLVLALAGLGLNILTGYTGQLSLGAAAFMAV 87 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ + L + + I + +I+ G+++GLPSL+ +G YL ++TL Sbjct: 88 GAFATYNLELRIPQLPLLVSIFLGGVIAALTGVVVGLPSLRIKGFYLIVSTLAAQFFIPW 147 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + ++ TN A + + + Y + L + + Sbjct: 148 LFTQYGWFTNNNASGVITAP-------------RMEILGYSINSPVGHYLLTLSIVVVLT 194 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 ++ L + +R +RD + A ++ + KL AFA+SS ++G+AGA +A A Sbjct: 195 ALARNLINSQYGRNFRAVRDMETAAITIGIPVSQTKLLAFAISSFYLGIAGALWAFAYLG 254 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I D + + ++ I+I+GG+ SL+ A ++ + L + F + Sbjct: 255 TIEADGLDLNRSFQILFIIIIGGLGSLTGSFLGAAFIVLLPILLSVLGQAVFGQAIDQAL 314 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + ++ L RL Sbjct: 315 -LQNLQKIIFGALIIYFLIKEPEGLSRL 341 >gi|118588204|ref|ZP_01545613.1| branched-chain amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] gi|118438910|gb|EAV45542.1| branched-chain amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] Length = 353 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 113/326 (34%), Gaps = 11/326 (3%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI- 83 + F +I I+++ +++G G++S + + IGAY + Sbjct: 25 ISLAFAPFLFPGTKSLETAARICIFIVLVASYDLLLGYAGIVSFAHTMFFGIGAYGTALA 84 Query: 84 --LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 S+ A ++ + +GL SL+ + + A+ TL ++ F ++ + Sbjct: 85 LSTTGPNYGSLIWGTAAGAGVAALFALAIGLFSLRVKAIFFAMVTLAVASAFAVLVSQMS 144 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G+ G+ + F + +I YY++ + ++L + Sbjct: 145 WLTGGEDGLNYKIPRELTPAFKLIKAKVFDVSING---KILAYYLVFFAAAILFLVMLRI 201 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DM 260 + + +RDN ++ +++ + +A +S+ +AG+ A P Sbjct: 202 VNSPFGRTLKAVRDNAFRAEAIGYRVVWYRTTATVLSAVMAALAGSLLAIWLRYTGPATT 261 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM----NFYYFNSLLKFDCSF 316 I ++ +V++GGM +L + I + + Sbjct: 262 LSMEIMIDILLMVVIGGMGTLYGAVLGATLFILAQTYLQNLMGVAAEATSAVPVFSTLVA 321 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 R + + L I ++ Sbjct: 322 PERWLLWLGVLFILSIYFFPTGIVGR 347 >gi|316933051|ref|YP_004108033.1| urea ABC transporter permease UrtC [Rhodopseudomonas palustris DX-1] gi|315600765|gb|ADU43300.1| urea ABC transporter, permease protein UrtC [Rhodopseudomonas palustris DX-1] Length = 398 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 96/326 (29%), Gaps = 32/326 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ S+ + + Y + A + ++ G G+LSL +A+G Y+ + R + + Sbjct: 44 PTYLISLFGKYVCYALLALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVY 103 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA------- 148 LP + D A L++ + + + + Sbjct: 104 ANPVLPDFMVFLNYKELPWYWYGFDMFWFAALMVLVVPGLLAFCFGWLAFRSRVTGVYLS 163 Query: 149 ------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + D + + F ++ + + Sbjct: 164 IITQAMTYALLLAFFRNDFGFGGNNGLTDFKDILGFNVQADGTRAALFMLSCLALAIGFL 223 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 I + + + IRD + L + KL F +S+ G+AGA + I Sbjct: 224 ICRAVVTSKLGKVLIAIRDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGII 283 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P F + +I + V +GG +L A ++ + Sbjct: 284 NPSEFAPANSIEAVIWVAVGGRGTLVGAALGAVVVNYAKTVFTS-------------GPL 330 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 ++ V L+ ++ Sbjct: 331 APYWLFMLGALFVAVTLLLPKGIIGT 356 >gi|167035911|ref|YP_001671142.1| inner-membrane translocator [Pseudomonas putida GB-1] gi|166862399|gb|ABZ00807.1| inner-membrane translocator [Pseudomonas putida GB-1] Length = 304 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LMLGTLLFTVVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAMRVEVGTGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + + +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L ++++ R Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVMILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|26991546|ref|NP_746971.1| inner-membrane translocator [Pseudomonas putida KT2440] gi|148549946|ref|YP_001270048.1| inner-membrane translocator [Pseudomonas putida F1] gi|24986630|gb|AAN70435.1|AE016684_14 branched-chain amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|148514004|gb|ABQ80864.1| inner-membrane translocator [Pseudomonas putida F1] Length = 304 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ S FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + + +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L ++++ R Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVMILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|85707330|ref|ZP_01038413.1| probable branched-chain amino acid transport system, permease component [Roseovarius sp. 217] gi|85668138|gb|EAQ23016.1| probable branched-chain amino acid transport system, permease component [Roseovarius sp. 217] Length = 334 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 118/312 (37%), Gaps = 28/312 (8%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 A ++ + + +I+I M L +V G G++SL +GAY Y IL ++ G Sbjct: 21 FQAFTAEYFGLEILTEIVILAMLVIALDMVAGFGGMVSLCHGALLGVGAYGYAILSTKLG 80 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L+ + + + I+GA ++G + G Y +ATL ++ G + Sbjct: 81 LTPVVAMAGAVAIAGAVAWVIGAICARSHGIYFIMATLAFGQM-------------GYSY 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 ++ A + LG+ + + + R+ + + Sbjct: 128 VFEAPLFGGDDGLGGIARLDLSLIGLDLNDGRSFALFSLGVLAAIYGVAVLILRSGLGRS 187 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + N++ +L T+ K F +S G+AG A +SP + ++ + Sbjct: 188 LSGVMHNEQRMRALGLTVWRVKADVFGLSGLISGLAGVMAAQHVMFVSPGLLSWTVSGEA 247 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +VILGG+ +L A+ + + + Y+ ++ I L Sbjct: 248 LVVVILGGLGTLVGPLLGAAVFVLLKHEVGALTSYWH---------------LVVGILLI 292 Query: 330 LVILMRSHSLLR 341 V++ R++ + Sbjct: 293 AVVMSRANGIFG 304 >gi|284991625|ref|YP_003410179.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160] gi|284064870|gb|ADB75808.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160] Length = 422 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 98/303 (32%), Gaps = 28/303 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 L+ M A GLS++ G+ GL + IGA + + + G+ + ++ +I Sbjct: 142 LRFGLLIAMAAVGLSLIFGTTGLTNFAHGELVTIGAIAAWFINVQGGVPLVPAALIAMVI 201 Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 G + L + R +A L++S +L I G AD Sbjct: 202 GAGVGALNELAIWRPLRRRGTGLVAALVISIGLSLLLRYLYQIIFGGGSEAYADYRGQRA 261 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + SS VI + + + + L+RT I A R + DN+ Sbjct: 262 VDYGAFTMTNADLSSIVIALVVL-----------LLVAVMLQRTKIGKAMRAVADNRDLA 310 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 S + L + + A + G S + F +++ + V LGG+ + Sbjct: 311 ASSGINVNRVILVVWMMGGALAALGGVLLGLSDEV--QWDMGFRLLLLMFAGVTLGGLGT 368 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + ++ V++ + + + R +L Sbjct: 369 AYGALVGSIVVGVFVQMSTLVIPNDVKYVGGLLLLIVILIV-------------RPQGIL 415 Query: 341 RLR 343 R Sbjct: 416 GSR 418 >gi|33592989|ref|NP_880633.1| putative permease component of branched-chain amino acid transport system [Bordetella pertussis Tohama I] gi|33572637|emb|CAE42231.1| putative permease component of branched-chain amino acid transport system [Bordetella pertussis Tohama I] gi|332382401|gb|AEE67248.1| putative permease component of branched-chain amino acid transport system [Bordetella pertussis CS] Length = 649 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 64/337 (18%), Positives = 126/337 (37%), Gaps = 36/337 (10%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 LR + ++ L + L Y + ILI V+FA L ++G G Sbjct: 315 PLRPAAPRLRILWGVLLASLAVLPLLAQWL--PYAVVLTQDILIAVLFAVSLHFMMGPGG 372 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 + S + +GAY +L L + + + ++ ++ G ++ G YLA+ Sbjct: 373 MHSFGHAAYFGLGAYGAALLLKAASLPMEAALAFAPLVGALGALVFGWFCVRLSGVYLAM 432 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL S+I +++ +W T G G+ +L T + ++ + ++ Sbjct: 433 LTLAFSQIVWSVVFQWDDFTGGSNGMIGVWPAEWLSGTAYYYLALAVVAAAVLGLRRVLF 492 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + A R RD+ ++ + + +AF V+ AF G+ Sbjct: 493 -------------------SPFGYAMRAGRDSSLRADAIGIDVKRVQWAAFVVAGAFGGL 533 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA +A S+ ISPD S+++ + +V+LGG+ +L + + Y Sbjct: 534 AGALYAFSKGSISPDTMAVSKSVDGLVMVLLGGIQTLIGPVVGATAFNVLQDYIMRATEY 593 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + L++L+ + Sbjct: 594 WRA---------------LFGGVILLLVLVFPQGIAG 615 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 100/307 (32%), Gaps = 18/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + + + A GLS++ G +++ Y +G AYS V L W Sbjct: 10 LLNGLAEASSLFLVAAGLSLIFGVTRIVNFAHGSLYMLGVYVAYSIVERVGGTALGFWFG 69 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +++ G G + + L+ + L+ + ++ G Sbjct: 70 LVAASLAVGVVGAAIEVVLLRRIYRAPELFQLLATFALVLVINDAALWIWGA-------- 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 R+ Y ++ +++ + + L L RT R Sbjct: 122 --EDLLGRRAPGLTGAIDLLGRRYPVYNLVLIVVGPVVLGLLWLLLTRTRWGTLVRAATQ 179 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + FA+ + G+ GA IV++ Sbjct: 180 DREMLGALGVNQAWLFTGVFALGAMLAGLGGALQLPREPA--SLSLDLRTIGDAFVIVVV 237 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A I+ + LC G+ +LL SF+ + + LV++ R Sbjct: 238 GGMGSIPGAYVAALIIAEIKALCIGLGT---VTLLGLSISFSKLTLVVEFAFMALVLVFR 294 Query: 336 SHSLLRL 342 L Sbjct: 295 PWGLFGR 301 >gi|93005820|ref|YP_580257.1| inner-membrane translocator [Psychrobacter cryohalolentis K5] gi|92393498|gb|ABE74773.1| inner-membrane translocator [Psychrobacter cryohalolentis K5] Length = 356 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 102/340 (30%), Gaps = 27/340 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +L ++ L L + Y ++ +I+ M A L +V G G+LSL + + Sbjct: 21 FLVLLILPWLHLLPETSSFHLSAYWITLIGKIMALAMVALALDLVWGYAGILSLGHGLYF 80 Query: 75 AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 A+G Y++ + + W +P + M L L Sbjct: 81 ALGGYAFGMYLTRETAGTGLPDFMRFLSWTELPWYWAGTQHFWWAMALVVLVPGLVAFIF 140 Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + +I + + + + + Sbjct: 141 GYFAFRSKIKGVYFSIITQAMTYAAALLFFRNETGFGGNNGFTGFTTLLGYDITASSTRA 200 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + + LS + +L IRD++ L ++ KLSA+ +S+ Sbjct: 201 VLCFTTALALLLSYLGLRYLMSQPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVI 260 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA + I+P +I + V GG SL + + Sbjct: 261 AGIAGALYVPQVGIINPGEMNPVNSIEMAVWVAAGGRGSLIGAIVGAGAINAIKTY---- 316 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F ++ ++ +V L + ++ Sbjct: 317 ----------FTVAYPEFWLLILGGLFVVVTLFLPNGIIG 346 >gi|150376361|ref|YP_001312957.1| inner-membrane translocator [Sinorhizobium medicae WSM419] gi|150030908|gb|ABR63024.1| inner-membrane translocator [Sinorhizobium medicae WSM419] Length = 335 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 114/334 (34%), Gaps = 27/334 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++L L + ++ +I+ + L +V G G+ +L + GA Sbjct: 24 LAALAVILVLAVIGYLLFPNNLALLTRIMAIALLVLSLDLVTGYCGVATLGHAALFGSGA 83 Query: 79 YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ I + L++ + G++ G+ L+ G + ++ + +F Sbjct: 84 YAAGIAAVHFGITDPLLMVAAGIIGGALAGLVCGVVILRAHGLPQLVLSIALIHLFHEFA 143 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 K T G G+ G ++ ++ Y + + + Sbjct: 144 NKASSWTGGSDGLAGIAPDPLFGI------------FAYDLWGRTAYVFAVVLLAIVFMF 191 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + R+ R I+++ ++ + A L + +S A G+ GA A S + Sbjct: 192 LRLVVRSPFGMLCRGIKEDPIRIQAMGGSPTIALLKMYVISGAVAGVGGALNAVSTQVVG 251 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 D F+ + + +++LGG SL T + + +L N +++ Sbjct: 252 LDSLSFTLSAESLVMLVLGGTGSLFGAVTGTIVFMLFEDLVSAANPFHW----------- 300 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T++ L V+L L R Sbjct: 301 ---LTMVGALLIAVVLFAPKGLYGTVAEVLARRR 331 >gi|260890492|ref|ZP_05901755.1| hypothetical protein GCWU000323_01662 [Leptotrichia hofstadii F0254] gi|260859734|gb|EEX74234.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Leptotrichia hofstadii F0254] Length = 298 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 109/302 (36%), Gaps = 20/302 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + IY + A G ++V G + L++ +GAY+ ++ G+ + L I +S Sbjct: 10 INGLQTGSIYALIALGYTMVYGIVKLINFAHGDILMVGAYAT-LIAVSNGMPLILAIVLS 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ G+++ + + + I+ LI + +L I G ++ Sbjct: 69 IILCAIMGVVIDFFAYRPIRNAPKISALITAIGMSFLLESLALIIFGAN-----PKVIDQ 123 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 L + F+ + +V++ ++ L+++ T + A R + + A Sbjct: 124 KYIPAFLSNNNKINLGFLSISMLTIFVIVVTSICMIALNLFIKNTKLGKATRAVSQDTGA 183 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + FA+ S + GA +A +I P M + + GG+ Sbjct: 184 AQLMGINVNKTIAITFAIGSGLGALGGALYAIVYPQIEPYM-GMLPGLKAFIAAVFGGIG 242 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ +L + G + + + + F L L+++ R + L Sbjct: 243 SIPGAMVGGYVLGLLEAYVKGSSLTTWANPIVFG-------------VLILILIFRPNGL 289 Query: 340 LR 341 Sbjct: 290 FG 291 >gi|229196178|ref|ZP_04322928.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus m1293] gi|228587336|gb|EEK45404.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus m1293] Length = 317 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 127/322 (39%), Gaps = 31/322 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + + I + +IS I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F YYV L + ++ Sbjct: 122 RGLTHGGDGFTFGVPDVFRERF-------------------TFYYVTLICLLIIFVLLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + + Y+ S L + R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T ++ + +V+L+ L+ Sbjct: 274 TIILGVLYIIVLLVFPKGLVGT 295 >gi|218779836|ref|YP_002431154.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218761220|gb|ACL03686.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 332 Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 130/325 (40%), Gaps = 26/325 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 LA+ L + ++ +++ +V++A L++++ G+LS + Y +G Sbjct: 8 LALWVVFLAAAGIAPHVLGIVKTNVLVELAGFVLYAVSLNLLLSYTGVLSFGHALFYGVG 67 Query: 78 AYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY+ +L + + +S + +G G+I+ ++ G A+ TL ++ + Sbjct: 68 AYTTALLLYHVEGFPVIGALLLSGLAAGVIGLILSPLLVRVTGTAFAMLTLAFGQLMFIL 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 +K++ +T G+ GI D + S ++ YY L +C + Sbjct: 128 CLKFREVTGGEDGIAGYDVP---------NLNIPGIASFDMLDPTVFYYFALAVCVIGVL 178 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 I+ ++ +T + IRDN L + K FAVS F G+AG+ FA + + Sbjct: 179 IMWYITKTPLGQVVVGIRDNTLRVDYLGYKVPQTKAIVFAVSGFFAGIAGSLFALFQGIV 238 Query: 257 SPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 S D + I +++GG+ + + +LI + +L Sbjct: 239 STDGVLHIMVSFYPIMAILIGGIGTFFGPILGSGVLIVLEDLI---------------MR 283 Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340 + R + + V+L LL Sbjct: 284 YTERAELITGLLFIGVVLYAPGGLL 308 >gi|269837566|ref|YP_003319794.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] gi|269786829|gb|ACZ38972.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] Length = 331 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 122/335 (36%), Gaps = 36/335 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A V L L Y + IL++ A +I+ G G +S + IG Sbjct: 8 IAPVLLGLAVLASLPFVLDPYWLRIATGILMWAGLACAWNIIGGYAGYISFGHSAFFGIG 67 Query: 78 AYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY+ IL + + + V + + ++G P+L+ RG Y AIAT +E+ + Sbjct: 68 AYAAGILMGNRYGLPFGVALLVGVVAASVVAALIGWPTLRLRGAYFAIATWAFAEMLLQL 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 IT G AG+ + L F Y +L+ + Sbjct: 128 A-NILDITGGTAGLTLPPLLDE---------------------RFFFYAMLVAAVVTYGA 165 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L R+ + +RD++ A SL K+ AF +S+A G+ +A I Sbjct: 166 SYFLLERSRFGYRLKAVRDSEVAAESLGINTTLVKIQAFVLSAAIPAAFGSIYAYWITFI 225 Query: 257 SPDMFKFSENII-VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +P + ++ +V+LGG+ A + Y N ++ + + Sbjct: 226 NPTSVLGAYIADQMVVMVLLGGLGHFWGPAIGAV------------SMYLVNRIIWTEWA 273 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + ++ + V+L L+ L + L Sbjct: 274 NTTAYIAILGAVIAAVVLFLPDGLVSLWPGTRRLR 308 >gi|157145810|ref|YP_001453129.1| hypothetical protein CKO_01561 [Citrobacter koseri ATCC BAA-895] gi|157083015|gb|ABV12693.1| hypothetical protein CKO_01561 [Citrobacter koseri ATCC BAA-895] Length = 524 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ G + + +++ + + + Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYSTWMVQQFMGQFMPQWLAFYPVVALPVAFL--IAAGTG 308 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L W + + L + + + + Sbjct: 309 MALERGIIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPAWLSGGVQVYANL 368 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 VL + L L +T + R + N+ + AF + Sbjct: 369 TLPWNRIVVLGFAMLVLFFTWLLLNKTRLGMRVRAVTQNRSMAACCGVPTGRVDMLAFGL 428 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L ++ Sbjct: 429 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 486 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +++IA+ L I R L L+ Sbjct: 487 LEPQMGAVLGK-------------IVILIAIVLFIQKRPQGLFALKGR 521 >gi|49176906|ref|YP_025409.1| putative ABC transporter permease protein [Ralstonia eutropha JMP134] gi|72384291|ref|YP_293644.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|39777486|gb|AAR31061.1| putative ABC transporter permease protein [Ralstonia eutropha JMP134] gi|72123644|gb|AAZ65787.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 320 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 134/341 (39%), Gaps = 40/341 (11%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 R+++ C+ A+V+ LL + + + I +FA ++++G G Sbjct: 12 PERMSRSTIGWCVAALVFALLPLAI------GESYAFLTVDFFIMSLFAMSYNLLLGQAG 65 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +LS Y +GAY+ IL ++YG+ WL + + +++ +G S++ G Y A+ Sbjct: 66 MLSFGHATYYGLGAYAVAILQNKYGVPPWLGLVAAPIVAALGAFAIGWLSVRVTGMYFAM 125 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL ++ +++ W T G G+ VA +++ Y Sbjct: 126 LTLAFGQLVFTLVLGWYTFTGGDDGLPVALP-------------------DWMLSARNYY 166 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y L + L +I + ++ A IRDN++ + ++ +L AF V++AF G+ Sbjct: 167 YFSLVIVALCIWLIYRVTKSPFGVALGAIRDNRQRAAYIGLSVRRLELQAFVVAAAFAGV 226 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG A + P + +S++ + + + GG+ S A+ + Y Sbjct: 227 AGGLRAPLQQMAFPGLLNWSQSADPVLMALAGGINSFVGPIVGAALFVFTNFAVTSRFEY 286 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + L++L ++ Sbjct: 287 P---------------LLVFGTLVLLIVLFLPDGIVGTLRR 312 >gi|23500683|ref|NP_700123.1| branched-chain amino acid ABC transporter permease [Brucella suis 1330] gi|163845070|ref|YP_001622725.1| hypothetical protein BSUIS_B0949 [Brucella suis ATCC 23445] gi|254712714|ref|ZP_05174525.1| hypothetical protein BcetM6_04976 [Brucella ceti M644/93/1] gi|254715784|ref|ZP_05177595.1| hypothetical protein BcetM_04986 [Brucella ceti M13/05/1] gi|256015718|ref|YP_003105727.1| branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|256058881|ref|ZP_05449095.1| hypothetical protein Bneo5_00761 [Brucella neotomae 5K33] gi|261217548|ref|ZP_05931829.1| inner-membrane translocator [Brucella ceti M13/05/1] gi|261320423|ref|ZP_05959620.1| inner-membrane translocator [Brucella ceti M644/93/1] gi|261322816|ref|ZP_05962013.1| inner-membrane translocator [Brucella neotomae 5K33] gi|23464331|gb|AAN34128.1| branched-chain amino acid ABC transporter, permease protein [Brucella suis 1330] gi|163675793|gb|ABY39903.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|255998378|gb|ACU50065.1| branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|260922637|gb|EEX89205.1| inner-membrane translocator [Brucella ceti M13/05/1] gi|261293113|gb|EEX96609.1| inner-membrane translocator [Brucella ceti M644/93/1] gi|261298796|gb|EEY02293.1| inner-membrane translocator [Brucella neotomae 5K33] Length = 331 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 25 LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 81 GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328 >gi|295839497|ref|ZP_06826430.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease [Streptomyces sp. SPB74] gi|197699384|gb|EDY46317.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease [Streptomyces sp. SPB74] Length = 309 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 93/305 (30%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ + IG + + + L + Sbjct: 8 LANGLILGAMYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGAYTVWTVLPDGSSLGAVI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 MI G + + + R Y + LI ++ + A Sbjct: 68 PLMILGGILCSVLVGTAAERFAYRPLR----GAPRLAPLITAIGLSLFLQQLVWAFYPDA 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + +V++ ++ ++ RT + + Sbjct: 124 KSDISFPQFHGDPFHVLGATVQRGDLFVIIAAPVCMIALGWFVNRTRSGRGMQATAQDPD 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + AFA+ +AF + + +I M F + + +LGG+ Sbjct: 184 TAKLMGINTDRIIVMAFAIGAAFAAVGAVGYGLHNGQIGFRM-GFIMGLKAFTAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L L G L + L +V+L+R Sbjct: 243 GNLYGAMLGGLVLGIAESLATGYMGDVPGMDL---FGGGAWKDVWAFVLLIVVLLIRPQG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|229160944|ref|ZP_04288933.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus R309803] gi|228622512|gb|EEK79349.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus R309803] Length = 317 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 127/331 (38%), Gaps = 31/331 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + + I + ++S I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F YYV ++ Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTFICLITIFIVLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVATISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + + Y+ S L + R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T ++ + +V+L+ L+ +R Sbjct: 274 TIMLGLLYIIVLLVFPKGLVGTVKKLKGFKR 304 >gi|222102107|ref|YP_002546697.1| ABC-transporter [Agrobacterium radiobacter K84] gi|221728224|gb|ACM31233.1| ABC-transporter [Agrobacterium radiobacter K84] Length = 333 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 110/319 (34%), Gaps = 24/319 (7%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + L Y ++L+ A L++ VG G++SL + + Y+ Sbjct: 12 MLAMFGAAVLLPWLVSGYYVQFAAKVLMLGTLAMALNLSVGFGGMVSLCHAAFFGLAGYT 71 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +++ Y + LL +A+ A ++ I + L Sbjct: 72 LILVTPEYEVPSLLLTLAAAIAVVAVSALVIGLLSLRTRGIYFIMVTLAFGEMLFFLFHD 131 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 I G GI++ + + + I Y V L C +I Sbjct: 132 TGIGGGSDGIFLYVKPV---------LAAGSIVLLDLENPIVFYLVALSTCVACWCLITH 182 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L T +A RDN++ SL + +L AF VS+ G+AG AA ++P M Sbjct: 183 LLATPFGDALTAARDNERRALSLGIPVFRVRLVAFVVSAVMAGIAGYLSAAQFGFVAPQM 242 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + + + +V+LGG ++ +L+G+ +L + Sbjct: 243 LGWHLSATALVMVVLGGTRRVAGPLFGAILLVGLEDLLKIYVEEW--------------- 287 Query: 321 TTLMVIALFLVILMRSHSL 339 + + +++L L Sbjct: 288 KLYYGLIIIMLVLFVPGGL 306 >gi|13470929|ref|NP_102498.1| ABC transporter permease [Mesorhizobium loti MAFF303099] gi|14021672|dbj|BAB48284.1| probable permease of ABC transporter [Mesorhizobium loti MAFF303099] Length = 411 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 108/357 (30%), Gaps = 35/357 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 R+ IL A+V PLL A YI ++ + L Y + A L +V G G Sbjct: 14 RIAITILILLAAAIVVPLLNLAVSPTSAFYVPAYIVALTGKYLCYALLALALDLVWGYCG 73 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +LSL +A+G Y+ + R S + LP + D+ Sbjct: 74 ILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPILPDFMVFLNYKELPWFWYGFDHFWF 133 Query: 125 ATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRS 165 A +++ + + + + D + + Sbjct: 134 AAIMVLAVPGLLAFVFGWFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTD 193 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 F ++ M L+ I + + +RD + L Sbjct: 194 FKDILGFNVQADATRSALFAASAAMLALAVFITWAIVGSKYGKLLMAVRDAESRTRFLGW 253 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 KL AF VS+ G+AGA + I+P F+ S +I V+ +GG ++ Sbjct: 254 RAENVKLFAFTVSAVMAGIAGALYVPQVGIINPGEFEPSNSIEVVIWAAVGGRGTIVGPI 313 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ G+ + V L+ ++ + Sbjct: 314 IGALLVNAGKSWFTGV--------------LPELWLFALGGLFVAVTLLLPKGIIGM 356 >gi|229178362|ref|ZP_04305731.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus 172560W] gi|228605092|gb|EEK62544.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus 172560W] Length = 317 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 127/322 (39%), Gaps = 31/322 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + + I + +IS I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F YYV L + ++ Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + + Y+ S L + R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T ++ + +V+L+ L+ Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295 >gi|94984908|ref|YP_604272.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300] gi|94555189|gb|ABF45103.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Deinococcus geothermalis DSM 11300] Length = 326 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 120/316 (37%), Gaps = 37/316 (11%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 +Y+ + L+ + A I+ G +SL Y +GAY + +L Sbjct: 40 PLGARAEYLLQIAFFTLVAGVLALSWDILA-RSGQVSLAHAAFYGLGAYGFALLVKVTP- 97 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 ++ +P+SA+I+ +I+G +L+ G Y AIATL +E+ + I+ G A Sbjct: 98 -WFVAMPLSALIAALISLILGAVTLRLSGMYFAIATLAFTEVVRTIIQNLPESVAGGANG 156 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + L Y++ G+ +A + L +RR+ + +A+ Sbjct: 157 LLVPALLGGNAR-------------------AQYFLAFGVLLFTALVSLAIRRSRLHHAF 197 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIV 269 IR ++ L ++ KL AF +SS + G +A I+P + F + +I Sbjct: 198 AAIRQGEETARVLGVQVVRYKLLAFFISSFLAALGGVLYAGKTFFINPLETFSLANSIAP 257 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++ I GG+ + +L E S + + + L Sbjct: 258 LTTSIFGGLYTTLGPILGATVLRVAEEGL--------------HASVKNGYLIVYGLVLM 303 Query: 330 LVILMRSHSLLRLRTP 345 L IL L+ L Sbjct: 304 LSILWLPRGLMGLLRR 319 >gi|332286345|ref|YP_004418256.1| putative branched-chain amino acid transport permease [Pusillimonas sp. T7-7] gi|330430298|gb|AEC21632.1| putative branched-chain amino acid transport permease [Pusillimonas sp. T7-7] Length = 296 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 96/307 (31%), Gaps = 19/307 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + I L Y + A GLS++ G L +++ Y +GAY+Y ++ G+ WL +P Sbjct: 7 FVNGLIIGLYYALMAVGLSMIFGILKVVNFAHGEFYMVGAYTYTLISLNLGVPPWLALPT 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A+ A G + ++ L+ E + + + Sbjct: 67 AALAGAAIGWLTERWLMRPLYTGYGSWGLMKDEYAVVVTFGLSLLMINLFDKVIGPYPMR 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + ++ + + L+++R+ + + N+ Sbjct: 127 GPALWDVSRLRIGPFMMSGQKVVTAVLAIVLL----VGLALFIKRSLWGRQIQAVAQNRL 182 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A F S +AGA A + + IV++GGM Sbjct: 183 GASIAGIDTGRASSIVFMASGVLAAVAGALLAPVIN--PAPDVGIFPAVKSYVIVVIGGM 240 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A +L + Y T ++ L L+++ R Sbjct: 241 GSIPGSILAALLLGVLESFAAVYLSY-------------DYRDTYGLVLLILILMFRPQG 287 Query: 339 LLRLRTP 345 L R+ Sbjct: 288 LFGERSR 294 >gi|94313702|ref|YP_586911.1| putative branched-chain amino acid ABC transport system permease [Cupriavidus metallidurans CH34] gi|93357554|gb|ABF11642.1| putative branched-chain amino acid ABC transport system permease protein [Cupriavidus metallidurans CH34] Length = 331 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 118/319 (36%), Gaps = 26/319 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 + + A +G QILI +FA L +++G G++SL + +GAY Sbjct: 18 IVFWLAPVVAFFLLPDYLILGSQILIVGLFALSLDLILGYAGIVSLGHAAFFGLGAYMAG 77 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +LG+ + +A ++ G + ++ + TL + + K Sbjct: 78 LLGAHGWGEPLTGLLAAAAVAALAGWLCSFLVIRGGDLTRLMVTLGIGLMLFEAANKAAF 137 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ + F ++ Y L + F+ ++ L Sbjct: 138 LTGGVDGLSGV------------TMNKILGMFEFDLFGKTAYVYSLVVLFVIFLLVRRLV 185 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + R IR+ + +L T + + F V++A G+AG A + + D+ Sbjct: 186 ASPFGLSLRGIREGARRMPALGTDVPARLRAVFTVAAAIAGVAGGLLAQTTQFVGMDVLG 245 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F + ++ +++LGG L A+ + ++ G+N + Sbjct: 246 FPRSAELLVMLVLGGTGRLYGALVGAALFMIAQDVLAGIN--------------PVYWQF 291 Query: 323 LMVIALFLVILMRSHSLLR 341 + + L +++L ++ Sbjct: 292 WIGLLLVVIVLFARGGVMG 310 >gi|297539870|ref|YP_003675639.1| inner-membrane translocator [Methylotenera sp. 301] gi|297259217|gb|ADI31062.1| inner-membrane translocator [Methylotenera sp. 301] Length = 356 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 63/322 (19%), Positives = 127/322 (39%), Gaps = 16/322 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 F+ + + + ++ I L+ + GL+++ G G LSL A+GA++ Sbjct: 32 ALLAFAFIVVPFIGNDYWFSAVLIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGAFA 91 Query: 81 YV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 GL + + + A G+I GLPSL+ +G YL ++TL Q L Sbjct: 92 AYNFHLRIEGLPFLVSFFFGGITAAAVGVIFGLPSLRIKGFYLLVSTLAAQFFVQWALTN 151 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + ++ + + + S + Y + L + I Sbjct: 152 FAWFSHNSSSGVITAPPLIILGHDFSN-------------PVGRYLLTLTIVVALGLIAR 198 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISP 258 + ++ I W +RD A + ++ AKL AF +SS F+G+AG+ +A + P Sbjct: 199 SIVKSEIGRQWMAVRDMDTAASVIGISVSKAKLLAFGISSFFLGIAGSLWAFTYLGTVEP 258 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F + + ++ I+I+GGM S+S A ++ + L ++ + + + Sbjct: 259 HGFDLTRSFQILFIIIIGGMGSISGNFIGAAFIVLLPILLSVISNHLLSGAIDAG-QLEN 317 Query: 319 RHTTLMVIALFLVILMRSHSLL 340 + + ++ + L Sbjct: 318 FQKIIFGALIIFFLIKEPNGLA 339 >gi|302546242|ref|ZP_07298584.1| putative branched-chain amino acid transport permease [Streptomyces hygroscopicus ATCC 53653] gi|302463860|gb|EFL26953.1| putative branched-chain amino acid transport permease [Streptomyces himastatinicus ATCC 53653] Length = 310 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 97/308 (31%), Gaps = 7/308 (2%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + + +Y + A G ++V G + L++ + IG + + + L Sbjct: 5 PQTLVNGLTLGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTIYLWLPSGTSLA 64 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + M+ G + + + R Y L ++ + ++ Sbjct: 65 LSLPLMLIGGILASVAIATAAERFAY---RPLRGGPRLAPLITAIGLSIALQQAVWAFYP 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + S + + ++L+ ++ L++ ++ A + Sbjct: 122 DAKKARSFPQFEGSSFAISDSLHIQRGDAFLLIAAPLCMLALGLFVSKSRAGRAMQATAQ 181 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + AFA+ AF +A +I+ +M F + + +L Sbjct: 182 DPDTAKLMGINTDRIIVMAFAIGGAFAAVAALSHGLKYGQINFEM-GFIAGLKAFTAAVL 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ +L L Y + L LV+L+R Sbjct: 241 GGIGNIYGAMLGGVVLGIAEALA---IKYIQDIPGMDQLGGGAWKDVWAFTLLILVLLVR 297 Query: 336 SHSLLRLR 343 LL R Sbjct: 298 PQGLLGER 305 >gi|260461099|ref|ZP_05809348.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259033133|gb|EEW34395.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 320 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 124/323 (38%), Gaps = 24/323 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ ++ LF+ + Y + +IL+ +FA G +++ G +GLLSL + +A G Sbjct: 11 ALHLGVIALLFVLSFVLPDYYHGLLARILVLAVFAMGYNLLFGYVGLLSLGHAMFFAAGL 70 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y + + G ++ L + +GL +L+ G I T++ +++F +++ Sbjct: 71 YGAGLAVIQLGWNVPLAFAAGIACGAVLALAIGLLALRTTGVAFMIVTMMFAQVFYLLIL 130 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + T G G V L S + Y L + L I Sbjct: 131 YFAVWTGGDQGQVVPQPARVLNL---------GATSLDLTNPTVRYMSALALFSLVLMIT 181 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + R+ IR+N++ L KL+A VS A +GA +A I Sbjct: 182 LAIVRSRHGRVLVAIRENEERAKMLGYDTFSNKLAAVVVSGAICAASGAAYALLFGYIGS 241 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +I+ + V+LGG + T + V+++ G Sbjct: 242 SFASVQYSILPLLWVLLGGAATTLGPLIGTLFMYYVIDVTSGY---------------TS 286 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + ++ IAL L++L +L Sbjct: 287 AYLLIVGIALILLVLFFPKGVLG 309 >gi|325273659|ref|ZP_08139872.1| inner-membrane translocator [Pseudomonas sp. TJI-51] gi|324101205|gb|EGB98838.1| inner-membrane translocator [Pseudomonas sp. TJI-51] Length = 304 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAMRIDVGTGFVQLTYTKIFILVAAFLGMGLLTYVIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + + +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L ++++ R Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVMILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|296327742|ref|ZP_06870281.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155089|gb|EFG95867.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 295 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 89/306 (29%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95 I + IY + + G ++V G L++ IGAY+ + + IW Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSMGLPIWTT 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + +I G + + + + I+ LI + + Sbjct: 67 VIPAIIICAVIGCLAKRIAYRPLRNSPRISNLITAIGVSLFIENVFMKVFTPNTRSFPKI 126 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 T + + +L LS + L++++T A Sbjct: 127 FNQAPITF----------GNGINISFGAAITILTTVILSVGLQLFMKKTKYGKAMIATSQ 176 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S + + ++ +I P M I +L Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFIAAVL 235 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L F L +V+L + Sbjct: 236 GGIGILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282 Query: 336 SHSLLR 341 +L Sbjct: 283 PTGILG 288 >gi|296533638|ref|ZP_06896198.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296266034|gb|EFH12099.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 331 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 108/292 (36%), Gaps = 18/292 (6%) Query: 56 LSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 L++ +G G++S + +G Y+ IL + + LL + +S + L ++ Sbjct: 56 LNLALGQGGMVSFGHAAFFGLGGYAVGILYAHWSWQEPLLGLIPGSVSLPVTL---LAAV 112 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 G A+ + I + G S+ R FP Sbjct: 113 GLGGVAAAVIGALSLRTSGVPFIMITLAFAQMLFFLFVSLKAYGGDDGLSVRRQGEFPGL 172 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + +Y++ LG+ +++ + R+ R +++ +L T KL F Sbjct: 173 SLRDPAQLYWLCLGLLVAWLALLRRVTRSRFGQVLGAARQSERRLRALGVTPYPYKLVGF 232 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S +AGA +SPDM ++++ ++ +VILGG+ +L A L+G+ Sbjct: 233 ILSGMGAALAGALMVNQARFVSPDMLHWTKSGELMIMVILGGVGTLLGPVFGAAALVGLE 292 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L ++ ++ L LV+L L+ L + Sbjct: 293 SLLSSWTEHW---------------QVILGPILLLVVLFARGGLMALLRRAL 329 >gi|313500848|gb|ADR62214.1| Inner-membrane translocator [Pseudomonas putida BIRD-1] Length = 304 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 86/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + FV ++L+ + ++ T + R + ++K Sbjct: 129 GVPTLLEGAMRVEVGTGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + + +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL L G+ + + F L ++++ R Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVMILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|262044364|ref|ZP_06017427.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038252|gb|EEW39460.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 524 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 33/296 (11%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109 I G LG+++++ IGAYS ++ + +PV+ +++ GM Sbjct: 251 ITYGLLGVINMDHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 + ++ L I ++ + + + + ++ Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + +VLL +CF + RT + R + N+ Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + AF + S G+ G + + I +V+LGG+ L+ A Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ L+++ + L I R L L+ Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521 >gi|157145809|ref|YP_001453128.1| hypothetical protein CKO_01560 [Citrobacter koseri ATCC BAA-895] gi|157083014|gb|ABV12692.1| hypothetical protein CKO_01560 [Citrobacter koseri ATCC BAA-895] Length = 357 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 96/324 (29%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------- 84 ++ ++ +IL Y + A L +V G G+LSL I +A+G Y+ + Sbjct: 42 PLAVPVWVLTLAGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMGMYLMRQASG 101 Query: 85 ------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 S S +++ L + A + ++ Sbjct: 102 DGLPAFMSFLSWSELPWFWWGTQHFAWAMLLVVLVPGLLALVFGYFAFRSKIKGVYFSIM 161 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G + + + FP + + ++ + + L+ + Sbjct: 162 TQALTFAGMLLFFRNETGFGGNNGFTGFTTLLGFPVAATSTRVALFLATVILLVLALWLG 221 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ +RD + KL + +S+ G+AGA + I+P Sbjct: 222 YLLARSKFGRVLTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALYVPQVGIINP 281 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L ++ G L F Sbjct: 282 SEMSPTNSIEAAIWVALGGRGTLIGPVFGAVLVNGAKSL--------------FTVIMPE 327 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + V L ++ L Sbjct: 328 YWQLFLGLIFIGVTLFLPRGVIGL 351 >gi|296876042|ref|ZP_06900098.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296432953|gb|EFH18744.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 292 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 107/303 (35%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + + Sbjct: 8 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMVGAFMGYFLLNSWKVNFFVALLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 68 AMVGTAILGVVIEYLAYRPLRHSTRIAALITAIGVSFLLEYGMVFFVGANTRS------- 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I+ R+ + +L FL ++ +++T + A R + + Sbjct: 121 ----FPQVIKTVRYNFGPISISNIQLMILGVSVFLMVALQFIIQKTKMGKAMRAVSVDSD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + I P M + I +LGG+ Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + + ++ L +++L+R Sbjct: 236 GIIPGAALGGFVIGLLETFATAIG-------------LSDFRDAIVYAILIVILLIRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|254504561|ref|ZP_05116712.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222440632|gb|EEE47311.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 358 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 73/328 (22%), Positives = 130/328 (39%), Gaps = 13/328 (3%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + L+ F+ + A + ++ S+ I L++ + A GL+++ G G LSL + Sbjct: 27 IGLAAILLIAFVAVPAFANDFFLTSIMIPFLVFSLAAIGLNVLTGFCGQLSLGTGAFMGV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ + ++ L++ +S + S G I GLPSL+ +G YLA+ TL + Sbjct: 87 GAYAAYKLTTIFPDANVILMVLLSGIFSAGVGAIFGLPSLRIKGLYLAVTTLAAQFFLEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I+ + N V F S + Y+++L + A Sbjct: 147 CFIRIPWLYNYN---------ASGAIEVPHREAFGVVVSGAESTPLVRYFIVLTITVGIA 197 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 ++ + R I +W IRD A + + KL AFAVSS G+AGA + Sbjct: 198 VLMANVLRGRIGRSWMMIRDMDIAAELMGIRPLQTKLLAFAVSSYICGVAGAMMVFFWLN 257 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 P + + V+ +VILGG+ SL A + + + + Sbjct: 258 AAEPSSYSIQLSFQVLFMVILGGLGSLGGAFMGAAFIWILPVFLKFIPGVLGIDVAAEAV 317 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + +++ H RL Sbjct: 318 EHVT--FMIVGALIIFFLIVEPHGFARL 343 >gi|194290217|ref|YP_002006124.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Cupriavidus taiwanensis LMG 19424] gi|193224052|emb|CAQ70061.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Cupriavidus taiwanensis LMG 19424] Length = 308 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 94/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90 + + IY + A G ++V G +G+++ Y IGAY G L Sbjct: 12 LVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGAQAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS M++G G + + + + LI + L + I G Sbjct: 72 VLGAALLVSVMVTGVYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + I F V ++ L ++ L++ R+ + A Sbjct: 129 ----RDVSVPVLISGAIEFQMGGDFTVTVPYSRLLIVGVTLALMVALTLFIGRSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ + L F + + + G + +++ F I Sbjct: 185 RACAEDMRMANLLGIDTNKVISFTFVLGAMLAAVGGVLIGLTIGKLN-PFIGFIAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L G + ++ F + + Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300 >gi|169831291|ref|YP_001717273.1| inner-membrane translocator [Candidatus Desulforudis audaxviator MP104C] gi|169638135|gb|ACA59641.1| inner-membrane translocator [Candidatus Desulforudis audaxviator MP104C] Length = 293 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 92/303 (30%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ Y IGA+ + G +IW + Sbjct: 10 LLNGITLGSVYALIALGYTMVYGIIKLINFAHGDVYMIGAFV-GLTAVVLGANIWFALCA 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + + + +A LI S + + G Sbjct: 69 AMLACLIVAVSIERVAYRPLRGSTRLAPLISSIGVSIFIQTLMTLIKGPQ---------- 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +++ + +L+ L + L +RRT + A R ++ Sbjct: 119 -PVGFPQVVKNTIHTVGPLHISTVQIVILMVATCLMIILQLVIRRTKMGKAMRATSEDLH 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ + G + I P M + ++GG+ Sbjct: 178 TAGLMGINVNAVISFTFALGAVMAAAGGVLVGMYFNSIFPLM-GVMAGLKAFCAAVVGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ L +L F + L LV+L+R Sbjct: 237 GSVPGAVLGGLFLGVAE-------------VLGVAAGFGSYRDAIAFGLLILVLLIRPSG 283 Query: 339 LLR 341 LL Sbjct: 284 LLG 286 >gi|144575336|gb|AAZ53607.2| putative ribose ABC transporter [Mycoplasma hyopneumoniae 7448] Length = 604 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 99/323 (30%), Gaps = 27/323 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 K+L L ++ + L + S + ++ + A G ++V+ G + L+ Sbjct: 288 TKLLILFLIIAFITGALNVNFFSSYNWFVAILKNNIFIGFIALGQTLVI-LTGGIDLSVG 346 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 GA Y++L + GL ++ + +I A G++ G+ KF+ + + Sbjct: 347 SLIGFGATIYLLLTVKLGLHFVAVLFILIIILAAIGILNGILISKFKIPPFIVTLAGLLS 406 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + I I K T + + F ++L Sbjct: 407 LRGAIAILLKG-------------------TPITNAQDPIFNFFNYNLGSNFSVLVLVFI 447 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 A +I +++ + + DN A + + S F + GA + Sbjct: 448 ITVAVLIFFIKFSKFGRYVYAVGDNPVAATFSGIKNNKILILVYMFSGIFA-ILGALSIS 506 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 S + + ++ V+LGG A + + Sbjct: 507 SGTTSVSPNTGYGFELDTVTAVVLGG------TALTGGKGGVGKTIIGWFAMALLLNTFS 560 Query: 312 FDCSFNMRHTTLMVIALFLVILM 334 F + I + L IL Sbjct: 561 FFQLDSNFRLVAKGIIIVLAILF 583 >gi|320328515|gb|EFW84517.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330885625|gb|EGH19774.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 323 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 67/321 (20%), Positives = 132/321 (41%), Gaps = 16/321 (4%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV- 82 + F+ + + + ++ I L+ + GL+++ G G LSL A+GA++ Sbjct: 2 VFAFIAVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGAFAAYN 61 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + G+ + L + ++S ++ GLPSL+ +G YL ++TL + + +L ++ Sbjct: 62 LQLRVPGMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEWVLTRFSW 121 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 TN A + Y + LG+ L + L Sbjct: 122 FTNDNASGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLFWLARNLL 168 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMF 261 R + W +RD A + + AKL AFA+S ++G+AG+ +A A + P F Sbjct: 169 RGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLGTVEPHGF 228 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + + ++ I+I+GG+ S+ A ++ L ++ L+ N++ Sbjct: 229 DLNRSFQILFIIIIGGLGSVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQLENIQKM 288 Query: 322 TLMVIALFLVILMRSHSLLRL 342 L + ++ L RL Sbjct: 289 -LFGALIIAFLIKEPEGLARL 308 >gi|260465474|ref|ZP_05812664.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259029778|gb|EEW31064.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 326 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 116/328 (35%), Gaps = 21/328 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + V L + L Y S + IY + A G ++V G G +SL + Sbjct: 12 AGIAIAVVVALALVPLLPGAIDSYAFSFLFFVFIYAIMAQGWNLVAGFGGQISLGNHAFF 71 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ IL S L L + ++ G A+A +I+ Sbjct: 72 GLGAYTTAILWSGNYLWGSLYDAYPRI------YYFDPLTMVLGGLVAAVAAIIIGLPLL 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + L + ++ G P+ + Y V LG+ + Sbjct: 126 SKLRGDYFALGTLGFGEIVKVMFINGGDFTGGAFGVVAPAGTFDTLLPHYLVGLGLMVGT 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + +L R+ A +RD++ A + + K++AFA S+ G+AG+ + Sbjct: 186 ALAVRFLMRSRYGLALIAVRDDEMAASANGIDTLRVKVAAFAGSAFIAGIAGSLYTYYIF 245 Query: 255 RISPDMFKFSENIIV-ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + PD + +++ + + ++GG +L ++ V +L Sbjct: 246 HVGPDSVFALDWMLLPLMMTVVGGTGTLLGPILGAFVMYAVFDLAR-------------- 291 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 H + + + L +L L+R Sbjct: 292 IVVPDYHPVISGLTIILAMLFLPKGLMR 319 >gi|329116809|ref|ZP_08245526.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Streptococcus parauberis NCFD 2020] gi|326907214|gb|EGE54128.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Streptococcus parauberis NCFD 2020] Length = 289 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 107/303 (35%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + L+ ++ + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYYLINTLHLNFFVTLLL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + + IA LI + +L G Sbjct: 65 TMVTTATLGVLIEFLAYRPLRNSTRIAALITAIGVSFLLEYGMVYFVGAEARA------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ ++ + +LL L ++ +++T + A R + + Sbjct: 118 ----FPQALKIIKYNFGPISVTNVQLTILLVSLMLMLALQFIVKQTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + I+P M + I +LGG+ Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAGGVLIGLYYNSINPLM-GMTPGIKAFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A I+ + + + ++ L +++L+R Sbjct: 233 GIIPGAALGGFIIGLLETFSTSIG-------------LSSYRDAIVYAVLIIILLIRPAG 279 Query: 339 LLR 341 LL Sbjct: 280 LLG 282 >gi|295397177|ref|ZP_06807280.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] gi|294974566|gb|EFG50290.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] Length = 292 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 101/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +GL++ Y +GA+ L + G++I + + Sbjct: 8 LVNGLSLGSIYALMALGYTMVYGIIGLINFAHGDVYMVGAFFGFWLITGLGMNIIPALIL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+I+ + K IA LI + +L + G Sbjct: 68 TMIFTAILGVIIERVAYKPLRKSTRIAALITAIGVSYLLQNFMIYYVGPE---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + L ++ +R+T + R + + Sbjct: 118 -VRAFPTSLPNLSLDLGLFTISTQQVVIFIVTIILMIALQYIVRQTKMGQGMRAVSVDAD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + ++ FA+ SA G G + ISP M + I +LGG+ Sbjct: 177 AARLMGISVDSIISFTFAIGSALAGAGGVLVGIYYNSISPTM-GLTPGIKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V + + + L ++++ + Sbjct: 236 GSIPGAMLGGVLIGVVESMVS-------------MIGLSTWRDAAVYFILIIILVFKPSG 282 Query: 339 LLR 341 LL Sbjct: 283 LLG 285 >gi|298486902|ref|ZP_07004956.1| branched-chain amino acid ABC transporter, permease protein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158567|gb|EFH99633.1| branched-chain amino acid ABC transporter, permease protein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 316 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 129/315 (40%), Gaps = 16/315 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88 + + + ++ I L+ + GL+++ G G LSL A+GA++ + Sbjct: 1 MPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGAFAAYNLQLRVP 60 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 G+ + L + ++S ++ GLPSL+ +G YL ++TL + + +L ++ TN A Sbjct: 61 GMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEWVLTRFSWFTNDNA 120 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 + Y + LG+ L + L R + Sbjct: 121 SGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLFWLARNLLRGELGR 167 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENI 267 W +RD A + + AKL AFA+S ++G+AG+ +A A + P F + + Sbjct: 168 NWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLGTVEPHGFDLNRSF 227 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ I+I+GG+ S+ A ++ L ++ L+ N++ L Sbjct: 228 QILFIIIIGGLGSVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQLENIQKM-LFGAL 286 Query: 328 LFLVILMRSHSLLRL 342 + ++ L RL Sbjct: 287 IIAFLIKEPEGLARL 301 >gi|170079160|ref|YP_001735798.1| high-affinity branched-chain amino acid transport permease protein [Synechococcus sp. PCC 7002] gi|169886829|gb|ACB00543.1| high-affinity branched-chain amino acid transport permease protein [Synechococcus sp. PCC 7002] Length = 296 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 92/302 (30%), Gaps = 16/302 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I + A GL++ G L L + +GAY + S ++ Sbjct: 7 VLNGLSVGSILALAAVGLTLTYGILRLSNFAHGDYMTLGAYITWLSNSLGLNIWLSMVVG 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G + L R TLI+ I + I+ + +G D Sbjct: 67 AFGTIGGMLVAEKLLWQPMRDKRATPTTLIIISIGLALFIRSAVLFIWGSGNQQYDLPVV 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L+ + + V++ + + L+ + + A R + DN Sbjct: 127 RAINLTELVGLP-ETVPDLRIAYYRVVVMVLTVLVILGLHFILQNSKVGKAMRAVADNID 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + L + ++ +AG+ + + + + + VILGG+ Sbjct: 186 LARVSGIDVERVVLWTWIITGTLTAIAGSMYGLITTV--RPNMGWFLILPMFASVILGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + ++ EL + + + +++L+R Sbjct: 244 GNPYGAIAGAFVIGIAQEL-------------SVAWLGPDYKLGVALFIMVVLLLVRPQG 290 Query: 339 LL 340 L Sbjct: 291 LF 292 >gi|91780479|ref|YP_555686.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693139|gb|ABE36336.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 357 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 110/327 (33%), Gaps = 26/327 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L + + L + ++ S L+ + A ++ G G+L+L Sbjct: 23 VSALLMWSVAMAAAALVPFFAGPWLLSTVRDALVMGILALSYDLLWGRAGVLTLGHTTFL 82 Query: 75 AIGAYSYVILGSRYGLSIW--LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 +GAY + + ++G + L+ V + A + L R + AI +L + + Sbjct: 83 GLGAYGFAVATVQFGQAPVTGLVAGVLCAAAVAAVIGYFLLFAGVRLHFFAIISLAVLIV 142 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 Q + + W+ +T G GI L F + + +Y + + Sbjct: 143 AQQLAVSWQSVTGGDTGILGIPGLSFSA----------GGHTLDMSGPRASWYTVAIVLL 192 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + +I + R+ I N+ + F L F S+A +AG AA Sbjct: 193 AATGLIWLVCRSRYGKVLDAIAANEWRAKACGYHTSFHLLLVFVASAALAAIAGVLMAAC 252 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 ++PD+F VI V +GG A +L + + + + Sbjct: 253 SGVVAPDVFSPILATEVILWVAIGGRGRTGGPVVAAVVLTLLRQTVSSYSTDGWP----- 307 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ +L + L Sbjct: 308 ---------LILGGLFLACVLFLPNGL 325 >gi|254238419|ref|ZP_04931742.1| hypothetical protein PACG_04560 [Pseudomonas aeruginosa C3719] gi|126170350|gb|EAZ55861.1| hypothetical protein PACG_04560 [Pseudomonas aeruginosa C3719] Length = 359 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 89/304 (29%), Gaps = 13/304 (4%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS- 86 A Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 39 PADSALHLSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMR 98 Query: 87 ---------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 W +P + + L L A + + Sbjct: 99 QASGDSLPAFMIFLSWNELPWYWAGTKNFLWALCLVVLVPGALAFAFGYFAFRSRIRGVY 158 Query: 138 IKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 AG+ + R + FP + ++ + + S Sbjct: 159 FSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGTRAALFLATVALLAAS 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L R+ +RD + KL + +S+ G+AGA F Sbjct: 219 LLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQVG 278 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I+P + +I V LGG +L ++ G Y+ L Sbjct: 279 IINPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFLGALF 338 Query: 315 SFNM 318 Sbjct: 339 IVVT 342 >gi|302518450|ref|ZP_07270792.1| urea ABC transporter, permease UrtB [Streptomyces sp. SPB78] gi|318056308|ref|ZP_07975031.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces sp. SA3_actG] gi|318075969|ref|ZP_07983301.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces sp. SA3_actF] gi|333027881|ref|ZP_08455945.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces sp. Tu6071] gi|302427345|gb|EFK99160.1| urea ABC transporter, permease UrtB [Streptomyces sp. SPB78] gi|332747733|gb|EGJ78174.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces sp. Tu6071] Length = 309 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 94/305 (30%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ + IG + + + L + Sbjct: 8 LANGLILGAMYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGAYTVWTLLPDGSSLAAVI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 MI G + + + R Y + LI ++ + A Sbjct: 68 PLMILGGILCSVLVGTAAERFAYRPLR----GAPRLAPLITAIGLSLFLQQLVWAFYPDA 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + +V++ ++ ++ RT + + Sbjct: 124 KSDISFPQFHGDPFHVLGATVQRGDLFVIIAAPVCMIALGWFVNRTRSGRGMQATAQDPD 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + AFA+ +AF +A + +I M F + + +LGG+ Sbjct: 184 TAKLMGINTDRIIVMAFAIGAAFAAVAAVGYGLHNGQIGFRM-GFIMGLKAFTAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L L G L + L +V+L+R Sbjct: 243 GNLYGAMLGGLVLGIAESLATGYMGDVPGMDL---FGGGAWKDVWAFVLLIVVLLIRPQG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|311103576|ref|YP_003976429.1| urea ABC transporter permease UrtC 1 [Achromobacter xylosoxidans A8] gi|310758265|gb|ADP13714.1| urea ABC transporter, permease protein UrtC 1 [Achromobacter xylosoxidans A8] Length = 348 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 99/337 (29%), Gaps = 27/337 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A++ L L + + ++ + + + A G+ + G G+LSL I + +G Sbjct: 11 IAILLVAALILAVLPLSLDPFRLNLVGKYMAFAFVAIGIVLTWGYSGVLSLGQGIFFGLG 70 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y + + L + + + L + ++ ++ Sbjct: 71 GYMMAMFLKLEASAPELPDFMVWSSVDSLPVWWQPFHSLTLTLLLIVVLPGLAAYLFSLA 130 Query: 138 IKWKPITNGKAGIYV-------------ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 I K ++ I + + + +Y Sbjct: 131 IFRKRVSGVYFAIVTLALAMTLTVLIIGQQGDTGGANGITDFRTLLGWDIVGDDGKQALY 190 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 ++ G ++ L + R+ + IRD + K FAV++ + Sbjct: 191 FIEAGALIVAMLAALAIVRSRLGKILIAIRDREDRVRFSGYDTAHVKACIFAVAAVLSSI 250 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 GAFF ISP +I ++ +GG S+ ++ + Sbjct: 251 GGAFFTLQVGLISPGAIGVVASIEMVIYAAVGGRLSIPGAVVGALLIGFLKSYLSE---- 306 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +F + V+++ + L Sbjct: 307 ----------TFPEVWLYFLGAIFIAVVVIMPNGLAG 333 >gi|300024322|ref|YP_003756933.1| inner-membrane translocator [Hyphomicrobium denitrificans ATCC 51888] gi|299526143|gb|ADJ24612.1| inner-membrane translocator [Hyphomicrobium denitrificans ATCC 51888] Length = 296 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 97/304 (31%), Gaps = 16/304 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I + A GL+IV G++ +++L IGAY V+ GL I+ +P++ ++ Sbjct: 8 LSIASILFIVALGLAIVYGTMKVINLAHGEMVMIGAYVTVLASKHLGLGIYSCLPLAFLV 67 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN-GKAGIYVADRLYFLGT 161 + G+ + ++ L L I + + G GI++ L Sbjct: 68 AALFGLAIERLVVRPLYGRLLDTLLATWGIALILQQLIRIHFGFGLFGIHIDGLGSDLQN 127 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ +V L + +T + R + + Sbjct: 128 VPVPPELQQTLHILGTNIPVYRAFVFGVAAVLGLVSWWLIYKTRFGSQLRAVSAARDITA 187 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 + AFA S G+AG + + I +V+ GG+ L Sbjct: 188 ACGVNDKRINALAFAYGSGLAGVAGVLVSGFKTV--SPDMGAPYVIDAFMVVVAGGVGHL 245 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + IL V S ++ T++ + L++L + L Sbjct: 246 LGTVLSAGILGEVQSFVAT-------------WSNDVYGRTVLFAFVILILLFKPQGLFV 292 Query: 342 LRTP 345 R Sbjct: 293 SRNR 296 >gi|73542004|ref|YP_296524.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72119417|gb|AAZ61680.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 308 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 96/297 (32%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G ++V G +G+++ Y IGAY ++ + L Sbjct: 12 LVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVQAGYPLPL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + VS +I+G G + + + + LI + L + I G Sbjct: 72 VLGAALLVSVVITGCYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + I F V ++ L ++ L++ + + A Sbjct: 129 ----RDVSVPILISGAIEFQMGSDFTVTVPYSRLLIVGVTLVLMIALTLFIGHSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ + L F + + + G + +++ F I Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLN-PFIGFIAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L V G + ++ F + + Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLVETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300 >gi|160943798|ref|ZP_02091029.1| hypothetical protein FAEPRAM212_01296 [Faecalibacterium prausnitzii M21/2] gi|158444972|gb|EDP21975.1| hypothetical protein FAEPRAM212_01296 [Faecalibacterium prausnitzii M21/2] gi|295104031|emb|CBL01575.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Faecalibacterium prausnitzii SL3/3] Length = 292 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 96/305 (31%), Gaps = 25/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G S+V G + LL+ +GAY + ++ GL + Sbjct: 8 LINGLSLGSIYALIALGYSMVYGIILLLNFAHGDVIMVGAYMSWFVMNQLGLGPVTAVCA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ + I+ LI + L + G Sbjct: 68 TIITCTLLGVVIEKIAYTPLRSAPRISLLITAIGVSFFLEYTAELILGS----------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + F V + L+ + +++T + A R + ++ Sbjct: 117 GAKVIPAYYTNQTFRLGKVPLGLTSIITLVVTVLSMLVLTFLVQKTKLGKAMRAVSEDMD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FAV SA G+ + S + +P M + +LGG+ Sbjct: 177 AARLMGINVNSTISFTFAVGSALAGIGSVLYCCSYPQATPTM-GSMLGLKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + + + + F L +V+L++ Sbjct: 236 GSIPGAMVGGIAIGLCECFVSAIGLSAWKDAVTF-------------AILIIVLLVKPTG 282 Query: 339 LLRLR 343 L + Sbjct: 283 FLGRK 287 >gi|239931888|ref|ZP_04688841.1| branched chain amino acid transport permease [Streptomyces ghanaensis ATCC 14672] gi|291440256|ref|ZP_06579646.1| branched chain amino acid transport permease [Streptomyces ghanaensis ATCC 14672] gi|291343151|gb|EFE70107.1| branched chain amino acid transport permease [Streptomyces ghanaensis ATCC 14672] Length = 310 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 102/308 (33%), Gaps = 13/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---SYVILGSRYGLSIWLL 95 + + + +Y + A G ++V G + L++ + +GA+ + + G SIW+ Sbjct: 8 LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMVGAFGAITVHLYLLPDGTSIWVA 67 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P+ + + +++ + + +F L A + LI ++ A Sbjct: 68 LPLMLLGAVIVSVLVAIGAERFAYRPLRGAPRLAP------LITAIGLSLALQQAVWAFY 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 I F + ++L+ A + ++ RT + Sbjct: 122 PEAKSKLAFPQIEGGPFSIGGATIQTGDIFLLIAAPISMAFLAYFVMRTRTGRGMQATAQ 181 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + AFA+ + F + G +I M F + + +L Sbjct: 182 DPDTAKLMGVNTDRIIVIAFALGAVFAAVGGVASGLKYGQIDFKM-GFILGLKAFTAAVL 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ +L V L S+ +++I + L R Sbjct: 241 GGIGNIYGAMIGGLVLGIVETLATAYIADIPGLHQFGSQSWAEVWAFILLILVLLF---R 297 Query: 336 SHSLLRLR 343 LL R Sbjct: 298 PQGLLGER 305 >gi|121605608|ref|YP_982937.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120594577|gb|ABM38016.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 351 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 118/336 (35%), Gaps = 26/336 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L+ L L S + S+ Q I+ +FA G+ +++ G+ S + Sbjct: 9 IFAFSGAALVAGLALTFGVSSGTVLSLLTQATIFAIFALGVGLLLRQNGMASFGHATYFG 68 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 Y IL + I ++ + ++GL ++ G + TL + ++F Sbjct: 69 SAGYIIGILLQLKAVPAEAAIVLAVLGITGFAFLLGLVIVRVPGIAFGMLTLAVGQMFFL 128 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + +T G G+ + F FP S ++ M+ + + + Sbjct: 129 TANRSRGLTGGADGMNIEWPAT-----------LFGFPMSAIVQPGNMFMLSWAVLVVCM 177 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + +RDN++ + + + + FA+S+ +AG A + Sbjct: 178 GGLALGLHGRFGAITEAVRDNEERARFIGIRTLLPRAALFALSAGITSVAGTLTALNTGF 237 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +SP+ +S + + + +VI+GG +L A + ++ ++ Sbjct: 238 VSPESLHWSVSGVALMMVIVGGYKALWGPALGAIVYFLAKDVLGDYANHW---------- 287 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + IAL VI+ L +R Sbjct: 288 -----MAIFGIALITVIVFSPTGLAGALGRLFKGKR 318 >gi|163735729|ref|ZP_02143159.1| inner-membrane translocator [Roseobacter litoralis Och 149] gi|161390982|gb|EDQ15321.1| inner-membrane translocator [Roseobacter litoralis Och 149] Length = 410 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 106/356 (29%), Gaps = 32/356 (8%) Query: 10 KYDKILCLLAVVYPLLLFLFLGA--------TKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + +LAVV F F + I + I +IY A GL+++ Sbjct: 55 RVTTTFGILAVVLIAAAFSFADPQNNCVANGSFVASQISNGLIIGIIYGFMALGLTLIFS 114 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGL------SIWLLIPVSAMISGACGMIMGLPSL 115 LG++S Y IG + + + + ++ + M P Sbjct: 115 ILGVVSFAHGEFYMIGGMLVYYITAVWFPGVSPLLGVLGACFIAFCLGAVFERAMLTPMY 174 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 K + D ++ + L + +G + + + + F +S Sbjct: 175 KGKVDRPVEYGILATFGLAFTLQYFVQAVHGASPVKASRFIDFPRIRWPEDADPLWIKTS 234 Query: 176 FVIYEIF--------MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 +F + + + +++ L RT A R + ++ A Sbjct: 235 RGNLTLFETISISNPRFVAAITCILVLLALLYLLHRTWTGKALRAVSQDRDAAAIAGIDP 294 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + AFA+ +AGA + + + IV+LGG+ SL Sbjct: 295 NRMNMLAFALGGMIAALAGALLVQAFSWL--PQVGAIPAMRSFVIVVLGGLGSLPGAFFG 352 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 I+ V G + + T +++ R L R Sbjct: 353 GIIVGLVEAAGTGCVPDAQKAASYIPAYGMIVLTLTLLL--------RPTGLFGRR 400 >gi|124266315|ref|YP_001020319.1| putative amino-acid transmembrane ABC transporter protein [Methylibium petroleiphilum PM1] gi|124259090|gb|ABM94084.1| putative amino-acid transmembrane ABC transporter protein [Methylibium petroleiphilum PM1] Length = 335 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 102/332 (30%), Gaps = 10/332 (3%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + L AV+ L L + I + + +Y + A G ++V G + L++ Sbjct: 9 YRPLGGAAVLIHSALQGDLTMDIFIQQIINGLVLGSMYALVALGYTMVYGIINLINFAHG 68 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +GA + + + + ++ + + IA + Sbjct: 69 EVLMVGALTSWTVVT----VLAAAGLPGWLLLLISLVAAIIVCSALNFAIEKIAYRPLRN 124 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + + + L+ F + +L+ Sbjct: 125 APRLAPLITAMGMSLLLQTLAMIIWKPNYKPYPILLPSEPFNVFGAVINTTQILILVVTA 184 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 A ++ + +T + A R +N + + + F + +A +AG +AA Sbjct: 185 LTLAGLMFLVNKTKLGRAMRATAENPRVAGLMGVRPDTVISATFVIGAALAALAGVMYAA 244 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + + M F + + + GG+ +L +L + + G +L Sbjct: 245 NYGSVQHTM-GFLPGLKAFTAAVFGGIGNLPGAMVGGVLLGLIESIGSGYIGQLTGGVLG 303 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + I L LV+ +R LL R Sbjct: 304 -----SHYQDIFAFIVLILVLTLRPQGLLGER 330 >gi|327481917|gb|AEA85227.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 335 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 106/327 (32%), Gaps = 26/327 (7%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + L + +++L + +FA ++++G GLLS +A G Y Sbjct: 31 VFYAVLLVIALLAPLAVYPVFLMKLLCFALFACAFNLLLGYAGLLSFGHAAFFATGGYIT 90 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + S Y L ++ ++ + R + + Sbjct: 91 GYMLSSYSGLSTELGILAGTLASTVLGALFGMLAIRRQGIYFAMITLALAQLVFFVFVQA 150 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 P T G+ G+ R F + + MYY +L + L +II Sbjct: 151 PFTGGENGLQGVPR-------------GHLFGLVDMKNNMAMYYFVLAVFVLGFAIIQRT 197 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + IR+N+ SL + KL AF +S+A G+AG+ S Sbjct: 198 IHSPYGQVLKAIRENEPRAVSLGYNVDRHKLLAFVISAALAGLAGSTKTVVFQLASLTDA 257 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + + VI + +LGG+ ++ +++ + + Sbjct: 258 HWHMSGEVILMTLLGGVGTILGPLVGATVVVTLQSYLS-------------NGPLGEWVH 304 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNF 348 ++ + L +L+ ++ Sbjct: 305 VILGVIFVLCVLLFRSGIVGWLERLVK 331 >gi|221636041|ref|YP_002523917.1| inner-membrane translocator [Thermomicrobium roseum DSM 5159] gi|221158192|gb|ACM07310.1| inner-membrane translocator [Thermomicrobium roseum DSM 5159] Length = 356 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 108/307 (35%), Gaps = 10/307 (3%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +I Q IY + A G ++V G L +++ + GA + L S +L Sbjct: 53 DFIVFGIAQGSIYALIALGYTMVYGVLRMINFAHGEVFMSGAMTTFFLADYLNRSGFLKA 112 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + + + + + + G + Sbjct: 113 HPWISLIAMLLFSGLVSMTI----AVLVERIAYRPLRGAPRLVPLITAVGASFFLQYTFR 168 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G+ VR+ +++ V +G+ ++L+L+RT A R + ++ Sbjct: 169 GLFGSGVRAYPAIPVLQGKLWVFQKTQIAVFVGVAITLLLLLLFLQRTRAGLAIRAVAED 228 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++A + + A ++ FAV G+AG +A ++ M F I + +LG Sbjct: 229 REAAALMGVDVDRAIVTTFAVGGFMAGIAGVLYALVFIQVQFFM-GFLPGIKAFTAAVLG 287 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +L A +L + + + F + + + + L L+++ R Sbjct: 288 GIGNLPGAAVGGLVLGIIESVGPSLFFDGYGIR-----AAHQLKDVIAFTILVLILIFRP 342 Query: 337 HSLLRLR 343 +L R Sbjct: 343 TGILGER 349 >gi|212716439|ref|ZP_03324567.1| hypothetical protein BIFCAT_01363 [Bifidobacterium catenulatum DSM 16992] gi|212660692|gb|EEB21267.1| hypothetical protein BIFCAT_01363 [Bifidobacterium catenulatum DSM 16992] Length = 309 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 103/304 (33%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G + L++ +GAY ++ + + + L Sbjct: 13 IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGAYV--LMLTIPAIVAFGLPAW 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+I + ++ + + NG I+ AD Sbjct: 71 VAVIPAILMCVAVGVIVERAAYKPVREKGNSMTALITAIAMSLLLENGSQAIFGAD---- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 TV ++I+ + + + + ++ L++ T A R + ++++ Sbjct: 127 -YQTVPTIIQIPTLSLGKLKIDGATIITIALGVIIMVALQLFVSHTKQGKAMRAVSEDKE 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +A + S ++S M + +LGG+ Sbjct: 186 ASILMGINVNSTITLTFAIGSGLAAVAALMYCISYPQVS-PMMGAMLGLKAFVAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V L ++ S ++ L +V+L++ Sbjct: 245 GSIPGAMVGGLVIGVVESLTKAYIGTITGGVITSAFSDA-----IVFGILIIVLLVKPSG 299 Query: 339 LLRL 342 L+ Sbjct: 300 LMGE 303 >gi|322390029|ref|ZP_08063567.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] gi|321143283|gb|EFX38723.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] Length = 292 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + + Sbjct: 8 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDVYMVGAFMGYFLLNSWKVNFFVALLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 68 AMVGTAILGVVIEYLAYRPLRHSTRIAALITAIGVSFLLEYGMVFFVGANTRS------- 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I R+ + +L FL ++ +++T + A R + + Sbjct: 121 ----FPQVIETVRYNVGPISISNIQLMILGVSIFLMIALQFIIQKTKMGKAMRAVSVDSD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + I P M + I +LGG+ Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + + ++ L +++L+R Sbjct: 236 GIIPGAALGGFVIGLLETFATAIG-------------LSDFRDAIVYAILIVILLIRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|306846167|ref|ZP_07478729.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO1] gi|306273418|gb|EFM55279.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO1] Length = 331 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 129/337 (38%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 25 LSAVILGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + G+++G +++ +G Y + TL ++++F Sbjct: 81 GGAAYVTAHAVKEWGVSPELGLVLGILAAAVLGLVIGYLAIRRQGIYSTMITLALAQMFF 140 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRRFLFGFIDLNQPMNMYYFVLAVFVLG 186 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328 >gi|307730451|ref|YP_003907675.1| inner-membrane translocator [Burkholderia sp. CCGE1003] gi|307584986|gb|ADN58384.1| inner-membrane translocator [Burkholderia sp. CCGE1003] Length = 475 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 105/306 (34%), Gaps = 27/306 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Q ++ + Q ++FA ++++G GLLS +GA + +R+G+ + LL Sbjct: 56 QSWLLAYLAQTATMIVFALSYNLLLGETGLLSFGHAAYAGLGALIAAHVFNRFGVPLALL 115 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 V + CG ++G S + G A+ TL + E+ G+AG+ + Sbjct: 116 PLVGGAGAALCGALLGFISTRRAGTAFAMITLGIGELVAAAAWTLPDWFGGEAGVAI--- 172 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 F + Y ++ C L++ + L RT +RD Sbjct: 173 ---------DRASGPAFGAWTFGPAREAYTLIALWCLLASVAMFALTRTPFMRLANAVRD 223 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N ++ + +S+ F G+AG + + +S + + V+ ++ Sbjct: 224 NPVRAAAIGCYPRRIRYGVVIMSAFFAGVAGTLALINVELVSTESVSMLRSGSVLIATVI 283 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG + +L + + + + ++++ Sbjct: 284 GGTGAFFGPVAGAVVLTFFSTAVASVTRAW---------------LFYLGLFFVVIVVAA 328 Query: 336 SHSLLR 341 L Sbjct: 329 PDGLAG 334 >gi|163939782|ref|YP_001644666.1| inner-membrane translocator [Bacillus weihenstephanensis KBAB4] gi|229132806|ref|ZP_04261651.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus BDRD-ST196] gi|163861979|gb|ABY43038.1| inner-membrane translocator [Bacillus weihenstephanensis KBAB4] gi|228650633|gb|EEL06623.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus BDRD-ST196] Length = 333 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 130/334 (38%), Gaps = 31/334 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V+ L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VFMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + ++ I + ++S I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFFIGIAAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YY+ + Sbjct: 135 EKWRSLTHGGDGFTFRVPDIFRDRF-------------------TFYYITFICLISIFIL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R T ++ + +V+L+ L+ +R Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKKLKNFKR 320 >gi|206561446|ref|YP_002232211.1| putative branched-chain amino acid transporter permease [Burkholderia cenocepacia J2315] gi|198037488|emb|CAR53424.1| putative branched-chain amino acid transport system, permease component [Burkholderia cenocepacia J2315] Length = 371 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 96/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 28 VAIGIGVPLAALVAPEASAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 87 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 88 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 147 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 148 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 207 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L+ + + + +RD + L + + KL + Sbjct: 208 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 267 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +I + V +GG +L + G Sbjct: 268 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 327 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 328 SVFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 360 >gi|163856635|ref|YP_001630933.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella petrii DSM 12804] gi|163260363|emb|CAP42665.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella petrii] Length = 308 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 104/311 (33%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G ++V G +G+++ Y IGAY ++ + Sbjct: 12 VFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTNSGLPLPF 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I ++ V+ +++G G + + + + LI + L W + G Sbjct: 72 IIAAMLLVAIVVTGVYGFSVERVAYRPVRGSQRLVALISAIGMSIFLQNWVALGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + + ++F V +++ L ++ L+++ + + A Sbjct: 129 ----RDMAVPSLISGSLQFNMGSQFDVTLPYSRIMIIVVTVLLMVALSLFIKYSRMGRAS 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + L F + + + G A + +++ F I Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFVLGAMLAAVGGVLIAITIGKLN-PFIGFLAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETLAAAYISSQYKDIVAF-------------ALLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|295400900|ref|ZP_06810876.1| urea ABC transporter, permease protein UrtC [Geobacillus thermoglucosidasius C56-YS93] gi|294977163|gb|EFG52765.1| urea ABC transporter, permease protein UrtC [Geobacillus thermoglucosidasius C56-YS93] Length = 357 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 109/345 (31%), Gaps = 27/345 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + L LF ++ S+ + L + M A GLS++ G G+LSL + + +GAY Sbjct: 7 LYWLFFLALFAAPFYLTEFRLSLLGKFLCFAMIAIGLSLLWGHTGILSLGHGVYFGLGAY 66 Query: 80 SYVILG---SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + S G + P + L + Sbjct: 67 CMAMYLKLESAPGRLPDFMEWSGVNKLPWFWKPFEHPLFAMSAAIVIPVLLAAFLSYFTF 126 Query: 137 LIKWKPITNGKAGIYVA----------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + K + V + + F F S + +I +Y++ Sbjct: 127 KNRIKGVYFSLLSQAVVVVFVTLFIGKQEWTGGTNGLTNFSTVFGFSLSSPLTQIVLYWI 186 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + L WL + IRD + L K+ +++S+AF +AG Sbjct: 187 TVCLLLLIFLFSRWLTVSRFGRVLVAIRDGENRVRFLGFNPTTYKVFVYSLSAAFAALAG 246 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 F ISP M +I ++ V +GG +SL + Sbjct: 247 VMFVLQVGLISPAMMGIIPSIEMVLWVAVGGRSSLIGAVIGAIV--------------TN 292 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ F ++ + V++ + L + +R Sbjct: 293 SAKSFFSENYPDIWLLFLGGLFIGVVMFLPNGLAGIYESLKQRKR 337 >gi|123968419|ref|YP_001009277.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus str. AS9601] gi|123198529|gb|ABM70170.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus str. AS9601] Length = 376 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 106/358 (29%), Gaps = 35/358 (9%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MS+ ++ +K +L+ L+ + T + ++ + L + A G+ ++ Sbjct: 1 MSLSKIKFDKK----IVLSFWIILIALIIAAPTILPVFRLNLLGRYLSLSIVALGVDLIW 56 Query: 61 GSLGLLSLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMIS 103 G GLLSL I +A+G Y + + Sbjct: 57 GYTGLLSLGQGIFFALGGYCAAMYLQITSSSEFPNNIPEFFALYGVEKLPFFWEPFRSPV 116 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 I +P+L + + ++ +IL + + + Sbjct: 117 FTFFAIWIIPALVAGLIGFLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLK 176 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 + + F + +++ + + W+ + N IRD++ Sbjct: 177 TDVTQLFGQMVGSESMQRIFFWITAILVIAAWFFAKWVVKGRFGNILIGIRDDEPRVRFT 236 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + K F+++ G++GA + +SP +I ++ V +GG +L Sbjct: 237 GYNPVIFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLG 296 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + + LV+ +L Sbjct: 297 AILGAVFINYAKSLVSE--------------ALPASWMFIQGGLFILVVTALPEGVLG 340 >gi|330867110|gb|EGH01819.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330870998|gb|EGH05707.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 544 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 271 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAVIGMA 330 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 331 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 388 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 389 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 448 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 449 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 506 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 507 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 541 >gi|229588138|ref|YP_002870257.1| putative amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229360004|emb|CAY46858.1| putative amino acid ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 502 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ + I +I+ + Sbjct: 229 ITFGLLGVINMAHGEMLMLGAYSTYVVQMLMQRYVPAAIEFYPLIALPVAFFVTAAIGMA 288 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + + + + + + Sbjct: 289 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRLVFGAQNVEVSNPAWLSGGIQVLPNL 346 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + L L +T + R + N+ + AF + Sbjct: 347 VLPYNRIVIIAFALCVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 406 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 407 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 464 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 465 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 499 >gi|293605598|ref|ZP_06687978.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815978|gb|EFF75079.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 308 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + IY + A G ++V G +G+++ Y IGAY ++ + Sbjct: 12 FFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTSIGTNSGLPVPF 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I ++ V+ ++G G + + + + LI + L W + G Sbjct: 72 IIAAMLLVAITVTGIYGFSVERVAYRPVRGSPRLVALISAIGMSIFLQNWVALGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++F V +++ L + L+++ + + A Sbjct: 129 ----RDMAVPSLVSGAVQFHMGTDFDVTVPYSRIMIIVVTVVLMIGLTLFIKYSRMGRAS 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + L F + + + G A + +++ F I Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFVMGAILAAVGGVLIAITIGKLN-PFIGFLAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAFS-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|146278752|ref|YP_001168911.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025] gi|145556993|gb|ABP71606.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025] Length = 310 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 119/326 (36%), Gaps = 28/326 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++A+ +L L Y + +I++ +A G +I G GLLSL + +A Sbjct: 3 MIALHLAVLAVLAALQFVLPAYHHTNAARIMVLATYAIGFNIAFGYSGLLSLGHALFFAG 62 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y+ +L + G WL + + GA +GL +L+ G I TL+ ++ F Sbjct: 63 GMYATGLLVDQGGWQPWLALVAGPLAGGALAAAVGLLALRTAGPAFMIVTLMFAQAFHLA 122 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ W T G G R + + Y + + Sbjct: 123 ILYWGRFTGGDEG-------------FTLSGAARRIGAFDLADPATRYTAAFLLFGAAML 169 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L L R+ +R+N++ L AKL A A+S G AGA + + Sbjct: 170 GCLALARSRTGRVLVAVRENEERTRMLGYDTFRAKLFALALSGLISGAAGATYGLMFGYV 229 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +I+ + V+LGG ++ TA++ +++ + Sbjct: 230 GGSFASIQYSILPLIWVLLGGAGTVLGPLLGTALMFYLIDWASSV--------------- 274 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 ++ L L++L LL L Sbjct: 275 TTASQFVVGAVLILLVLFAPRGLLGL 300 >gi|71908383|ref|YP_285970.1| inner-membrane translocator [Dechloromonas aromatica RCB] gi|71848004|gb|AAZ47500.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Dechloromonas aromatica RCB] Length = 320 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 123/311 (39%), Gaps = 26/311 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + + + L+ +FA L ++VG GL+S + + AY+ L +Y Sbjct: 18 VPLTGESFYTELIAKTLVLAIFAMSLDLLVGFTGLVSFGHAAYFGVAAYAVAQLSPKYEA 77 Query: 91 -SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 S+W ++P + IS + +GL L+ +G Y + TL + P+ G G Sbjct: 78 ASLWFVMPAAVGISALVALFVGLFVLRTKGIYFIMVTLAF-AQLAFFVFHDTPLGGGSDG 136 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 IY+ + + + + +YY +L M L + + ++ Sbjct: 137 IYLNVKPT---------ASIAGWMPFDLDNQTHLYYFILAMLVLVYLFLGRILQSPFGRV 187 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 I+ N+ S+ KL+AFA++ G+AG +A ++P++ + ++ V Sbjct: 188 LVGIKSNEHRMQSMGYLTFRYKLAAFALAGGLGGIAGFLYAVVFGFVTPELLSWHQSGNV 247 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +VILGGM +L + G+ E+ + ++ +M + Sbjct: 248 LLMVILGGMGNLVGAIAGAFVFTGMQEVFGTWSKHW---------------QLIMGGVIV 292 Query: 330 LVILMRSHSLL 340 +L L Sbjct: 293 AAVLFLPGGLA 303 >gi|134294220|ref|YP_001117955.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134137377|gb|ABO53120.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia vietnamiensis G4] Length = 324 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 124/302 (41%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y+ G + L + + Sbjct: 26 FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLASAGYATGYTIQTLGFTPELGVLAGTV 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 86 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + + + I+ + + I++N+ Sbjct: 132 GLQGVPRGHLFGVLDLSNDVTLYYVVLAVIVAACAFIVRVVHSPFGQVLVAIKENEPRAI 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AGA + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGALKVLVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + + S T + + +L ++ Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASLTGVGWFHSLGESATIVTGLIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|224825878|ref|ZP_03698982.1| inner-membrane translocator [Lutiella nitroferrum 2002] gi|224602102|gb|EEG08281.1| inner-membrane translocator [Lutiella nitroferrum 2002] Length = 309 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 99/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G +GL++ +GA + + + + L Sbjct: 8 ILNGLVLGSIYALIALGYTMVYGIMGLINFAHGEVVMMGAMVTITVVTSLMGAGVNLPGP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ G I L + + +A L + ++ Sbjct: 68 ILVLIGLVIAIPACALLGYTIERVAYRPLRNAPRLAPLITAIGLSI--VLQQVAILIWGR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S++ + +++ + A +++ + +T + A R N Sbjct: 126 NYIPFPSILSHDTVEIFGASITVLQIMIIVLCLVIMAGLLIMVEKTKLGRAMRATSQNPG 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + S F + SA +AG A + D+ M F + + +LGG+ Sbjct: 186 VASLMGVNVNTIISSTFMLGSALGAIAGVMVATNYDQAHYYM-GFLIGLKAFTAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G L + + L LV++ R Sbjct: 245 GNLGGAVAGGILLGIIESLGAGYIGTLTGGFLG-----SHYQDIFAFMVLILVLIFRPSG 299 Query: 339 LLRLR 343 LL + Sbjct: 300 LLGEK 304 >gi|144227524|gb|AAZ44317.2| putative ribose ABC transporter [Mycoplasma hyopneumoniae J] Length = 604 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 99/323 (30%), Gaps = 27/323 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 K+L L ++ + L + S + ++ + A G ++V+ G + L+ Sbjct: 288 TKLLILFLIIAFITGALNVNFFSSYNWFVAILKNNIFIGFIALGQTLVI-LTGGIDLSVG 346 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 GA Y++L + GL ++ + +I A G++ G+ KF+ + + Sbjct: 347 SLIGFGATIYLLLTVKLGLHFVAVLFILIIILAAIGILNGILISKFKIPPFIVTLAGLLS 406 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + I I K T + + F ++L Sbjct: 407 LRGAIAILLKG-------------------TPITNAQDPIFNFFNYNLGSNFSVLVLVFI 447 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 A +I +++ + + DN A + + S F + GA + Sbjct: 448 ITVAVLIFFIKFSKFGRYVYAVGDNPVAATFSGIKNNKILILVYMFSGIFA-ILGALSIS 506 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 S + + ++ V+LGG A + + Sbjct: 507 SGTTSVSPNTGYGFELDTVTAVVLGG------TALTGGKGGVGKTIIGWFAMALLLNTFS 560 Query: 312 FDCSFNMRHTTLMVIALFLVILM 334 F + I + L IL Sbjct: 561 FFQLDSNFQLVAKGIIIVLAILF 583 >gi|83950627|ref|ZP_00959360.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83838526|gb|EAP77822.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 314 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 108/327 (33%), Gaps = 28/327 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L+ LF Y +I++ +A G +I+ G GLLSL + +A G Y Sbjct: 12 LGLIAVLFALQFLLPAYHHGNLARIMVLASYAVGYNILFGYTGLLSLGHALFFAAGMYGM 71 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + GLS + + + +GL +L+ G I TL+ ++ ++ + Sbjct: 72 GLGIQHGGLSPAPALVLGIGAGAVVSLALGLLALRTSGVAFMIVTLMFAQAGYLTILYFG 131 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 T G G + Y+ L + + LWL Sbjct: 132 EYTRGDEG-------------FVIQSAQRVLWGIDLSEPSNRYFAALVLFAACLLLSLWL 178 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R IR+N++ L KL A +S AGAF+ Sbjct: 179 IRRPFGRTLIAIRENEERVRMLGYDTQAHKLGAMVISGTISAAAGAFYGLLFGYAGASFG 238 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 +I+ + V+LGG ++ + +++L G+ H Sbjct: 239 AVPHSILPLLYVLLGGAGTILGPFMGALFMFYLIDLSSGV---------------TTAHM 283 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNF 348 + +AL L+ L ++ F Sbjct: 284 LIAGVALVLLTLFAPQGIMGELRRRAF 310 >gi|253999649|ref|YP_003051712.1| inner-membrane translocator [Methylovorus sp. SIP3-4] gi|313201690|ref|YP_004040348.1| inner-membrane translocator [Methylovorus sp. MP688] gi|253986328|gb|ACT51185.1| inner-membrane translocator [Methylovorus sp. SIP3-4] gi|312441006|gb|ADQ85112.1| inner-membrane translocator [Methylovorus sp. MP688] Length = 355 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 67/333 (20%), Positives = 129/333 (38%), Gaps = 16/333 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + F + + + ++ + L+ + GL+++ G G LSL A+GA++ Sbjct: 31 LLLVFAFAVVPFIANDYWFSAILVPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGAFA 90 Query: 81 YV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 GL L + + + G++ GLPSL+ +G YL ++TL Q +L Sbjct: 91 AYNFHLRIEGLPFLLSFVLGGITAAGVGILFGLPSLRIKGFYLLVSTLAAQFFVQWVLTS 150 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + +N + + + S Y + L + A + Sbjct: 151 FGWFSNNNSSGVITAPPLLVFGRDFS-------------SPAGRYLLTLAVVVALALLAR 197 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISP 258 + R+ + W +RD A + I+ KL AFA+SS F+G+AGA +A + P Sbjct: 198 NIVRSELGRHWMAVRDMDTAAAVIGIPILKTKLLAFAISSFFLGVAGALWAFTYLGTVEP 257 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F + + ++ I+I+GGM S+ A ++ + L ++ L+ Sbjct: 258 HGFDLTRSFQILFIIIIGGMGSILGNFLGAAFIVLLPILLSNLSGTVLAGLIDPG-QLEN 316 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + ++ L RL R Sbjct: 317 LQKIIFGGLIVFFLIKEPFGLARLWQNFRERSR 349 >gi|306841315|ref|ZP_07474024.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO2] gi|306288618|gb|EFM59954.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO2] Length = 331 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 25 LSAVILGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 81 GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328 >gi|16265226|ref|NP_438018.1| putative branched-chain amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|15141366|emb|CAC49878.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 333 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 113/334 (33%), Gaps = 27/334 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++L L ++ +I + L +V G G+ +L + GA Sbjct: 22 LAGLAVILVLAGIGYLLFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGA 81 Query: 79 YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ I + L++ + G+ G+ L+ G + ++ + +F Sbjct: 82 YAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEFA 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 K T G G+ +G +F ++ Y + + + + Sbjct: 142 NKASSWTGGSDGLAGISPDPLIGL------------FAFDLWGRTAYVFGVVLLAIVFVL 189 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + R+ R IR++ ++ + A L + +S A G+ GA A S + Sbjct: 190 LRLVVRSPFGMLCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVG 249 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 D F+ + + +++LGG SL T + + +L N +++ Sbjct: 250 LDSLSFTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSTANPFHW----------- 298 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T++ L V+L L R Sbjct: 299 ---LTMVGALLIAVVLFAPKGLYGTVAEVLARRR 329 >gi|327482356|gb|AEA85666.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 523 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ + +++ + Sbjct: 250 ITFGLLGVINMAHGEMLMLGAYTTYMVQVLMARLAPEALAFYPLVALPVAFFVTAAIGMA 309 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + V + + + + Sbjct: 310 LER--TVIRHLYGRPLETLLATWGISLILIQLVRVLFGAQNVEVANPAWLSGGLQVLPNL 367 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 368 VLPYNRMVIIGFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 427 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 428 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSIFAAFGLGIANKI 485 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 486 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 520 >gi|146284033|ref|YP_001174186.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145572238|gb|ABP81344.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] Length = 523 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ + +++ + Sbjct: 250 ITFGLLGVINMAHGEMLMLGAYTTYMVQVLMARLAPEALAFYPLVALPVAFFVTAAIGMA 309 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + V + + + + Sbjct: 310 LER--TVIRHLYGRPLETLLATWGISLILIQLVRVLFGAQNVEVANPAWLSGGLQVLPNL 367 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 368 VLPYNRMVIIGFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 427 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 428 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSIFAAFGLGIANKI 485 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 486 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 520 >gi|33597862|ref|NP_885505.1| putative branched-chain amino acid transport permease [Bordetella parapertussis 12822] gi|33574291|emb|CAE38624.1| putative branched-chain amino acid transport permease [Bordetella parapertussis] Length = 323 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 126/336 (37%), Gaps = 26/336 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +N+ A+V +L ++ + ++++ Y +FA ++++G GLLS Sbjct: 1 MNRQLLGYAAFAIVVGILPYVGVYPIF--------AMKVMCYALFACAFNLLLGYTGLLS 52 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AY+ +GL L + ++ G+ MG +++ G Y A+ TL Sbjct: 53 FGHAAFLGSAAYAAGYALKVWGLPTELGLAFGVAVAALLGLAMGALAIRRSGIYFAMITL 112 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 T G+ G+ R + + ++ +YYV+ Sbjct: 113 A----QMVFFFLQAHFTGGEDGLQGVPRGT-------------LLGTIDLRNDLNLYYVV 155 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 +G+ L +I + + +R+N+ SL + KL AF +S+A G+AGA Sbjct: 156 MGIFALGYFVIWRTVHSPFGQVLKGLRENEPRAISLGYDVDRFKLVAFVLSAAIAGLAGA 215 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + + +VI + ++GG+ +L+ I++ + Sbjct: 216 TKTLVFVSATLSDATWQMSGLVILMTLIGGLGTLTGPILGAFIVVLLENKVGDFGQMLTR 275 Query: 308 -SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L + T ++ + + ++ ++ Sbjct: 276 LTGLDWFLRLGESVTIVIGLIFVVCVMAFRRGIVGE 311 >gi|111219823|ref|YP_710617.1| putative branched chain amino acid ABC transporter ATP-binding protein [Frankia alni ACN14a] gi|111147355|emb|CAJ59006.1| putative branched chain amino acid ABC transporter ATP-binding protein [Frankia alni ACN14a] Length = 940 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 111/312 (35%), Gaps = 21/312 (6%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + +I + +V G G +SL + +GA L + +G Sbjct: 317 WWLLPAAWVNALGLQMIVGVILLSFVVVTGYAGQVSLVQIGFAGVGALMTAWLVADHGWP 376 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 WL + G+++GL L+ RG +LAI TL ++ + ++ T G G Sbjct: 377 FWLAAVAGVLAVVPVGIVVGLGGLRTRGVHLAILTLGLAISLEAVVFGNPRYTGGTEGYQ 436 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 V IR + + ++L + + A I+ LRR+ Sbjct: 437 V------------GAIRVAGLAVDALSFPKRYASLVLAVLVVVALAIVNLRRSRAGRRLI 484 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R N++A +L +++ AKL AF + + G A S F +++ + Sbjct: 485 AVRTNERAAAALGISVVGAKLYAFVLGGMIASLGGILLAFHDPVPSFGAFAGLQSVTALQ 544 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +LGG+ + + + E F + + + + + L + Sbjct: 545 NAVLGGVGATTGPLVGS---SFAPETLGQQIFSFLGAKVALYLALAS------GVGLLFM 595 Query: 332 ILMRSHSLLRLR 343 + L+ LR Sbjct: 596 LTSAPDGLVFLR 607 Score = 40.6 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 86/267 (32%), Gaps = 15/267 (5%) Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113 GL +V G+++ +GAY G L + + + + + G L Sbjct: 23 VGLVLVHRGSGVVNFAQGAMGMVGAYV-YFEGRGADLPDAVSVVLGLLAAAVLGAAFHLL 81 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L+ +A ++ + +L + G L + S++ Sbjct: 82 ILRRMRGASGLARIVATLALLVVLQSVAVLRYG-----------DLPKVIPSMLPIRPVS 130 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 Y+L + L+A++ R T A + +N ++ +L + + Sbjct: 131 VFGAQIGRDRLYILAIVVVLTAALWAVYRFTRFGVATSAVAENSRSAAALGVSPDLIGAA 190 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 +A+ +A +A A ++ I V++ ++G S A ++ Sbjct: 191 NWAIGAALGALAAILLAPITGLGPANLTYLV--IPVLAAAVVGRFASFPITLAAGLVIGI 248 Query: 294 VV-ELCCGMNFYYFNSLLKFDCSFNMR 319 E+ + + + F + Sbjct: 249 GQSEVTRYVTAPGLATAIPFVLVAVVL 275 >gi|328542696|ref|YP_004302805.1| High-affinity branched-chain amino acid transporter permease [polymorphum gilvum SL003B-26A1] gi|326412442|gb|ADZ69505.1| High-affinity branched-chain amino acid transport system permease protein [Polymorphum gilvum SL003B-26A1] Length = 350 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 121/325 (37%), Gaps = 16/325 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ L S Y+ + + I +M +GL + VG G +++ I Sbjct: 23 AGLWAAALVAGLIALPLASGPYLLGVMTHMFITLMAVYGLYVTVGMAGQINIAQSAFVGI 82 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA++ S YGL +W+++P +A+++GA ++ LP+ + +G YLA+ TL +F + Sbjct: 83 GAFTAA-KLSGYGLPVWVIVPAAALVTGAISVLFALPAARVKGFYLALTTLAAQVMFPIV 141 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ G + + R + + YY L + + Sbjct: 142 ILALPMDWLGGLVGLSVEPV--------------RLGGLTLTTPLHYYYFTLVLAAVLTV 187 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L+R+ + +RDN + + K+ AF S F G+AGA A + Sbjct: 188 AAFNLQRSRFGRSLMAVRDNDVVAEVMGIPVFRTKILAFFAGSLFAGVAGACTAYVLQFV 247 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCS 315 + F ++ + ++I+GG S + V E G+ Sbjct: 248 TVSSFTLFASVWYLGMLIVGGAHSALGAVLGVVFITLVQEGLHGVANKVVQAGAATSGGM 307 Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340 + + + + ++ L Sbjct: 308 LFALTSIALGGCILIALIFEPRGLA 332 >gi|254788092|ref|YP_003075521.1| urea ABC transporter permease UrtC [Teredinibacter turnerae T7901] gi|237685522|gb|ACR12786.1| urea ABC transporter, permease protein UrtC [Teredinibacter turnerae T7901] Length = 380 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 92/348 (26%), Gaps = 36/348 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L++ V ++ + + + ++ + L Y A GL + G G+LSL + + + Sbjct: 15 LISFVVLAVVIFIVMPLCTDIFRLNLIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFGL 74 Query: 77 GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 G Y + + + Sbjct: 75 GGYCMAMFLKLEASTPEATKIQSTPGIPDFMDWNQLTELPWFWEPFHSLPFTIIAVLVVP 134 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174 + + +A L L + + Sbjct: 135 TIFAYIIGVAMFKRRVGGVYFAIITQAIASILTILIIGQQGYTGGVNGITDLRTLLGWDI 194 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + +Y+V + F ++R++ + +R+ + + K Sbjct: 195 RTDSAKYVLYFVNGILLFACLLFAQFVRKSKLGRILLAMREREDRVRFSGYDVSNFKTFV 254 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F + +AF + GA F +SP +I ++ +GG S+ T ++ Sbjct: 255 FCMGAAFSAIGGAMFTLQVGFMSPSFVGIVPSIELVIFCAVGGRMSIIGAVYGTLLINWA 314 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F SF M V++ L L Sbjct: 315 KT--------------TFSESFPELWLFAMGALFIGVVMAFPSGLAGL 348 >gi|255283100|ref|ZP_05347655.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Bryantella formatexigens DSM 14469] gi|255266402|gb|EET59607.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Bryantella formatexigens DSM 14469] Length = 294 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 98/307 (31%), Gaps = 24/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ IY + A G ++V G +L+ +GA+ + ++ GLS L I Sbjct: 5 SYLKDGISLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAFVILTAVTKAGLSPLLSI 64 Query: 97 PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 ++ ++ G+++ + R +A LI + +L + G Sbjct: 65 LLAVVLCTVLGVVIEAVAYRPLRKASSNLAVLITAIGVSYLLQNLALLIFGADAKSFVTV 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + + + + ++ ++ +T A + + + Sbjct: 125 IDVPTLVLFD---------GQLTIKGITIVTIAACIIIMCALTFFVNKTKPGRAMQAVSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + FA+ S +AG ++ ++P I + Sbjct: 176 DRDAAQLMGVNVNSTISLTFAIGSGLAAIAGLLLCSAYPTLTPYT-GAMPGIKAFVAAVF 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ +L + ++ L +V+L++ Sbjct: 235 GGIGSIPGAMIGGILLGVIEIFGKAYISSQVADA-------------IVFAVLIVVLLVK 281 Query: 336 SHSLLRL 342 L Sbjct: 282 PTGLFGR 288 >gi|254470608|ref|ZP_05084012.1| inner-membrane translocator [Pseudovibrio sp. JE062] gi|211960919|gb|EEA96115.1| inner-membrane translocator [Pseudovibrio sp. JE062] Length = 311 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 99/314 (31%), Gaps = 28/314 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----------SYVILGSR 87 + + IY + A G ++V G +G+++ + +G++ + Sbjct: 8 LINGVTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMVGSFVALILIVALGITAATPVLL 67 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 L++ L++ V+ ++ G + + + +A LI + L + ++ G Sbjct: 68 LILALALVLVVAMALTAVWGWTVERIAYRPLRGSFRLAPLITAIGASIALQNFVQVSQGA 127 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 + + F + +I +++ L + T + Sbjct: 128 KNKPLQPLISGGFQLTDGGADGSGFIVNLSYVQI---LIVVTTVILMVGFTYLINNTNLG 184 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 + R ++K L + F + ++ +AG F + F + Sbjct: 185 RSQRACEQDRKMAALLGVNVDRTISLTFVMGASLAAVAGLMFLLYYGVVDFY-IGFLAGV 243 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ SL ++ + G + + F Sbjct: 244 KAFTAAVLGGIGSLPGAMLGGLLIGLIETFWSGYFSVEYKDVAAFS-------------I 290 Query: 328 LFLVILMRSHSLLR 341 L +V++ LL Sbjct: 291 LAIVLIFMPEGLLG 304 >gi|293603384|ref|ZP_06685812.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818294|gb|EFF77347.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 321 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 117/326 (35%), Gaps = 32/326 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ LL+ Q +++L + +FA +++ G GL+S + Y Sbjct: 10 ILALLLVPALFVPFFPQVVYPVFVMKVLCFALFALAFNLLTGFTGLVSFGHAAFFGWAGY 69 Query: 80 SYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + + +G + I ++ A G +G +++ G Y A+ TL +S++ + Sbjct: 70 ATGEMMILFGARGLPPEIAIVCGVAMAAAIGYAIGWLAIRRTGIYFAMITLALSQVAYFM 129 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ ++ + R + + MYY LG+ L Sbjct: 130 AVQVGWTRG--------------EDGMQGIARGKFLGLVDLSVDTNMYYFTLGVFVLGFL 175 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + + +TIRDN SL KL AF +S++ G+AG+ A + Sbjct: 176 FVYRVIHSPFGQVLKTIRDNAPRAISLGYDTDRCKLLAFVLSASVAGLAGSLKALVLQLV 235 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + + V+ + +LGG+ ++ +++ + + Sbjct: 236 ALNDVSLATSTEVLLMTLLGGIGTVWGPVVGATLVVSLQNYLATLGDVV----------- 284 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 T ++ + L + + Sbjct: 285 ----TIVIGLIFVLCVSFFRRGFVGE 306 >gi|262202785|ref|YP_003273993.1| inner-membrane translocator [Gordonia bronchialis DSM 43247] gi|262086132|gb|ACY22100.1| inner-membrane translocator [Gordonia bronchialis DSM 43247] Length = 446 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 95/308 (30%), Gaps = 25/308 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 LI + GLS++ G+ GL + +GA ++ + G+ + ++ Sbjct: 160 IDGLRFGLIIAITGVGLSLIFGTTGLTNFAHGELVTLGAVIAWVINVKLGVQLIPATIIA 219 Query: 100 AMISGACGMIMGL-PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +I G++ L R + +++ I ++I++ + Sbjct: 220 VVIGVGVGIVNELGLWRPLRRRRTGLVAMLVVSIGLALVIRYLILMF----------FSD 269 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + S ++ ++ + L++T I A R + DN+ Sbjct: 270 RSEPFADYQVQTQIGSGAFAITPVNLACIIISLVTLLAVAVMLQKTRIGKAMRAVADNRD 329 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENIIVISIVILGG 277 S + L + ++ + G FA S F +++ + + LGG Sbjct: 330 LAESSGINVDRVILFVWGLAGGLATLGGVLFALSELGGRVQWEMGFKLLLLMFAGITLGG 389 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + + I+ VV+L + + + R Sbjct: 390 LGTAYGALLGCVIVGLVVQLSTYVLSPDLKYIGGLLILIVILTI-------------RPQ 436 Query: 338 SLLRLRTP 345 +L R Sbjct: 437 GILGSRAR 444 >gi|114328498|ref|YP_745655.1| amide-urea transport system permease [Granulibacter bethesdensis CGDNIH1] gi|114316672|gb|ABI62732.1| amide-urea transport system permease protein [Granulibacter bethesdensis CGDNIH1] Length = 381 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 99/348 (28%), Gaps = 36/348 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + L L + + ++ + L Y A GL + G G+LSL + + + Sbjct: 11 ILCIGLFAFLILVVFPLGLDTFRLNLFGKYLTYGFVALGLVLCWGDAGILSLGQGVFFGL 70 Query: 77 GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 G Y + + + Sbjct: 71 GGYCMAMYLKLESSTPEATKIQSTPGIPDFMDWNQITSLPWFWKPFHSLAFTIFAVPAVP 130 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174 L + + +A L L + F + Sbjct: 131 MVLALVIAIAMFRRRVGGTYFAIITQAIAAILTILIIGQQGYTGGVNGITDLRSFHGWDI 190 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 +Y+V G+ S ++ ++RR+ + +RD + + K+ A Sbjct: 191 RTDHARNVLYFVCCGLLLGSLILLQFIRRSKLGRILLAMRDREDRVRFSGYDVASFKIFA 250 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F V++A G+ GA F +SP +I ++ +GG TSL T ++ Sbjct: 251 FCVAAALAGVGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRTSLLGALYGTLLVNWA 310 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F M +V ++ + L L Sbjct: 311 RSTLSE--------------AFPNAWLFAMGALFIIVTMVFPNGLAGL 344 >gi|88798004|ref|ZP_01113591.1| ABC-type branched-chain amino acid transport system, permease component [Reinekea sp. MED297] gi|88779201|gb|EAR10389.1| ABC-type branched-chain amino acid transport system, permease component [Reinekea sp. MED297] Length = 382 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 96/348 (27%), Gaps = 33/348 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 +L L LLF Y ++ + L Y M A + +V G G+LSL Sbjct: 27 LLVTLFASVGNLLFTEGSVFHVSTYTITLLGKYLCYAMLALAVDVVWGYCGILSLGHAAF 86 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +A+G Y + R + LP F D+ A L+ + Sbjct: 87 FALGGYGMGMYLMRQIGDRGVYGNPILPDFMVFLNWEQLPWYWFGFDHFGFALLMALLVP 146 Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174 + + + + + + + F Sbjct: 147 GLLAFVFGWLAFRSRVTGVYLSIMTQALTYALMLAFFRNEMGFGGNNGLTDFKDILGFDL 206 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + ++ + L+ + + +RD + L K+ Sbjct: 207 QSDTTRVALFAITAFCLSLTLLASHAIMTSRFGKVIIALRDTESRSRFLGYRTERYKVWL 266 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F S+ +AGA + I+P F +I V+ V +GG +L ++ Sbjct: 267 FVYSAVVAALAGALYVPQIGIINPGEFAPLNSIEVVIWVAIGGRGTLVGAVLGALLVNYA 326 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + LV L L+ + Sbjct: 327 KTRLTAI--------------FPDAWLFALGALFVLVTLFLPKGLIGM 360 >gi|325568962|ref|ZP_08145255.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325158000|gb|EGC70156.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 305 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 101/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y IG++ L +++ L + + + Sbjct: 21 LINGLFLGSIYALLALGYTMVYGIIKLINFAHGEVYMIGSFIGYFLINQWQLGFFPALFI 80 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + S A G+ + + + + I+ LI + L Sbjct: 81 SMIASAALGVTIEFLAYRPLRNSTRISALITAIGVSYFLQNVMIFFFSAN---------- 130 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + FV +L L + L +++T + A R + + Sbjct: 131 -VRPFPQAIERKTYSIGFVQVSNVQLLILAVSVTLMILLQLIVKKTRMGKAMRAVSVDAD 189 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G + I P M + +LGG+ Sbjct: 190 AARLMGINVNRTISFTFALGSALAAAGGMLIGLYYNSIDPSM-GVVPGLKSFVAAVLGGI 248 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ V + F+ L+ + L +++L+R Sbjct: 249 GIIPGAALGGFVIGLVETAATALG-------------FSDYKDALVYVILIIILLVRPAG 295 Query: 339 LLR 341 +L Sbjct: 296 ILG 298 >gi|298292371|ref|YP_003694310.1| inner-membrane translocator [Starkeya novella DSM 506] gi|296928882|gb|ADH89691.1| inner-membrane translocator [Starkeya novella DSM 506] Length = 338 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 129/338 (38%), Gaps = 29/338 (8%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + + + LL ++ + F Y ++ + + G +++ G G Sbjct: 16 PSKATRASGLWALLVILAAMAALPFFA----STYTLTLMVPFFALAIALLGFNLLFGYTG 71 Query: 65 LLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 LLS + IGAY+ ++ S+ S L++ VS ++S + +G +++ + Sbjct: 72 LLSFGHAMFLGIGAYTAAVMTSKLGVQSFELILLVSILVSVIIAIPVGFLCVRYTRIFFG 131 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 + TL +F ++L K+ +T G G+ V L F F Sbjct: 132 MLTLAFGMLFHSVLYKFYGLTGGDQGMRVLRPLLFGMEFEGGKTAF---------LTGPF 182 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 YY LG+ I+ + R+ + IR+N + L + +L+A+ +S + Sbjct: 183 YYYALGLLGALGLIMWRIVRSPFGLHLQAIRENAQKAAYLGVQVTRMRLAAYVISGLYGA 242 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 + GA A + P++ ++++ ++ + +LGG + + + + + + Sbjct: 243 IGGAILAITIGLADPEIVYWTQSGNLVFMAVLGGSGAFIGPVVGSLAFVLLQDTVMSITQ 302 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 Y+ +M L L+++ L Sbjct: 303 YW---------------RFVMGAVLILLVVFFPGGLSG 325 >gi|160941677|ref|ZP_02089004.1| hypothetical protein CLOBOL_06573 [Clostridium bolteae ATCC BAA-613] gi|158435174|gb|EDP12941.1| hypothetical protein CLOBOL_06573 [Clostridium bolteae ATCC BAA-613] Length = 327 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 124/324 (38%), Gaps = 29/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + L + S Y+ + LI + + +++G G S + +G Sbjct: 13 ILTLMAIGLGCSILPAVSSSYMMRVFNITLITYLCVLSVYVLLGLCGQNSFAQAGLWGVG 72 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY + + GL ++ + A I+G + + Y A++ + I + Sbjct: 73 AYITANMVLKLGLGSAAAFIIATTGTAAFAFILGFAFFRLKQYYFTFASVGLMTILNGLF 132 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + W P+T G GI G + R ++++L +C L++ Sbjct: 133 MNWVPVTGGALGISDIPVFSIAGFAANTENRK--------------FFLILIVCMLASLG 178 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I L + + ++ IRDN+ A L + K AFA+S A G AGA +A +S Sbjct: 179 IRILFHSPLGRSFMAIRDNEMAANCLGINSLLTKSIAFAISGALCGAAGAMYAFLSGYLS 238 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 F + ++ + + +++LGG S T I+ + E + Y Sbjct: 239 YQTFTYQQSTMYLIMIMLGGTMSPVGAIIGTLIISLLQEWVRPLQNYM------------ 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + + ++++++ ++ Sbjct: 287 ---QFIYGTGIMILMIVQPEGIIG 307 >gi|148255667|ref|YP_001240252.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146407840|gb|ABQ36346.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 351 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 75/316 (23%), Positives = 126/316 (39%), Gaps = 16/316 (5%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 + S +D++ L + A GL+++ G G +SL A+GAY+ L R Sbjct: 34 LVPLIGSDYLMDAVLTPFLALALAAVGLNVLTGYAGQVSLGSAAFLAVGAYAAYNLNLRL 93 Query: 89 GLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 L I ++ I+ A G+I GLPSL+ RG YLA++TL Q L K+ +N Sbjct: 94 PQLPLLADIVLAGGIAAAVGIIFGLPSLRLRGFYLAVSTLAAQFFVQWALTKFGWFSNDN 153 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 A + R S Y L + ++ + L + Sbjct: 154 ASGVIDAP-------------VIRVGSLTFTSATGRYVFSLTIVAVATVLTARLLSSQTG 200 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSEN 266 + +RD++ A + ++ KL AF VSS IG+AG +A A + P F + Sbjct: 201 RNFIAVRDHEIAARVIGVPLLRTKLLAFGVSSFLIGVAGVLWAFAYLRTVEPAGFNLDRS 260 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 ++ I+I+GG+ SL A +I L + S+ M ++ Sbjct: 261 FQILFIIIIGGLASLRGAFIGAAFIIVFPLLLSRLGAAVLGSVFDSGV-LEMSQRIVIGA 319 Query: 327 ALFLVILMRSHSLLRL 342 + ++ L+ L Sbjct: 320 LIIAFLIAEPRGLIAL 335 >gi|227499402|ref|ZP_03929513.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus tetradius ATCC 35098] gi|227218464|gb|EEI83707.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus tetradius ATCC 35098] Length = 295 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 100/307 (32%), Gaps = 29/307 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS----IWL 94 I + IY + A G ++V G L++ +GAY+ + + +WL Sbjct: 7 IFNGLQLGSIYALVALGYTMVYGIAKLVNFAHGDVIMVGAYTIALAIQTAAFNAGLPLWL 66 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 + ++ G+ + + + + ++ LI + L + + Sbjct: 67 TFIPAVVVCTVLGITVERVAYRPLRNSSPVSLLITTIGVSLFLQNLFVKLFTSSAKPIPA 126 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + + + ++ L+ + L++ +T + + Sbjct: 127 IFPQFSIQF-----------AGIHLSLATIVTIVSTIILTYILHLFINKTKNGKSMLAVS 175 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++ A + + FA+ SA G+A + +S +I P M I + + Sbjct: 176 EDYGASELVGINVNQVMTMTFAIGSALAGIASVLYVSSYPQIQPFMGSI-LGIKAFTAAV 234 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 LGG+ S+ IL + L + ++ + L LV+L+ Sbjct: 235 LGGIGSIPGAVIGGMILGMIEVLTRAYLSSAYADA-------------IVFMVLILVLLV 281 Query: 335 RSHSLLR 341 L Sbjct: 282 HPTGLFG 288 >gi|149913984|ref|ZP_01902516.1| ABC transporter, membrane spanning protein [Roseobacter sp. AzwK-3b] gi|149812268|gb|EDM72099.1| ABC transporter, membrane spanning protein [Roseobacter sp. AzwK-3b] Length = 382 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 108/366 (29%), Gaps = 42/366 (11%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N+ + +++ L L + + + L++ M +++ G G+L+L Sbjct: 3 NRIFILGDRAVYAAFIIIVLALPLLVDDVFWLNRIAKYLVFGMLGLAIALSWGYAGILNL 62 Query: 69 NCVIAYAIGAYSYVILG-------------SRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 + + +GAY + + A C + Sbjct: 63 GQGLFFGLGAYMIAMSLKLQSYTSLQQGSDKPIPDFMLWNAEPGAPTDLCCITPGSWLWI 122 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG-----------------IYVADRLYF 158 F+ + +A I+ + ++I +G + Sbjct: 123 PFQAQWFGMAMAIVVPVVFALIIGSTIFRLRVSGVYVAIITLALVLLARLLFIDLQPVTN 182 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L F + + YY++ + WL T ++ RD+ Sbjct: 183 GFNGLTDLGWLTIAGIEFDPFMVATYYIIAVSVCVVLLFSRWLISTRAGLILQSTRDDPN 242 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + ++ F VS+ G AG F + +P F + +I ++ +GG Sbjct: 243 RSRYLGYDVASYQVFFFTVSAGIAGFAGMLFVIVSEFATPTYFDIAFSISMVVWAAVGGR 302 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +SL A ++ + F ++ I LV+L Sbjct: 303 SSLIGAALGAILINTIEASVSE------------SEMFQQAWRLIIGIVFVLVVLFMPRG 350 Query: 339 LLRLRT 344 L L Sbjct: 351 LAGLAR 356 >gi|254248179|ref|ZP_04941499.1| ABC-type branched-chain amino acid transport system, permease component [Burkholderia cenocepacia PC184] gi|124874680|gb|EAY64670.1| ABC-type branched-chain amino acid transport system, permease component [Burkholderia cenocepacia PC184] Length = 404 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 92/334 (27%), Gaps = 36/334 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI------- 83 + ++ + L Y A GL I G G+LSL + + +G Y+ + Sbjct: 65 FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 124 Query: 84 -----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + + L + Sbjct: 125 DPAATHTQTTPGIPDFMDWNQLTALPTWWKPFHSLPFSILAVLVVPTALAFVIGYAMFKR 184 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188 + + VA L L + + ++ +Y+V Sbjct: 185 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLVLYFVNA 244 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + + W++R+ + +RD + + K+ AF +++ + GA Sbjct: 245 ALLIGALLVGRWVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAIGGAM 304 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 F +SP +I ++ +GG SL ++ Sbjct: 305 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 353 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F SF LM V+++ + L L Sbjct: 354 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGL 384 >gi|34496958|ref|NP_901173.1| leucine/isoleucine/valine transport system permease [Chromobacterium violaceum ATCC 12472] gi|34102814|gb|AAQ59178.1| leucine/isoleucine/valine transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 309 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 95/305 (31%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G +GL++ GA + + + L Sbjct: 8 ILNGLVLGSIYALIALGYTMVYGIMGLINFAHGEVVMFGAMVTITVITTLMGMGINLPGP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G I L F + +A L + ++ Sbjct: 68 ALVLIGLLVAIPACMLLGFTIERVAYRPLRGKQRLAPLITAIGVSI--VLQQVAILIWGR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ ++ + A ++L + +T + A R N Sbjct: 126 NYIPFPQILDHDVVSIFGASITKLQIVIIALCLAIMAGLLLMVEKTKLGRAMRATSQNPA 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + F + S +AG A + ++ M F + + +LGG+ Sbjct: 186 VAGLMGVNVNTIISATFVIGSGLGAIAGVMVATNYEQAHYYM-GFMIGLKAFTAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G L + + + L LV++ R Sbjct: 245 GNLGGAVAGGILLGIIESLGAGYIGSLTGGFLG-----SNYQDIIAFMVLILVLIFRPSG 299 Query: 339 LLRLR 343 LL + Sbjct: 300 LLGEK 304 >gi|254711853|ref|ZP_05173664.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella ceti M644/93/1] gi|254714922|ref|ZP_05176733.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella ceti M13/05/1] gi|261216613|ref|ZP_05930894.1| predicted protein [Brucella ceti M13/05/1] gi|261319482|ref|ZP_05958679.1| predicted protein [Brucella ceti M644/93/1] gi|260921702|gb|EEX88270.1| predicted protein [Brucella ceti M13/05/1] gi|261292172|gb|EEX95668.1| predicted protein [Brucella ceti M644/93/1] Length = 570 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 108/304 (35%), Gaps = 21/304 (6%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + KY + + I + L +V G G++SL + + Sbjct: 8 AALIALVFAALGAVILLGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGV 67 Query: 77 GAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA+ + + + + + + + + G+ +GLP+L+ RG LAI TL + F Sbjct: 68 GAWVTGYLNLIEAPGGLAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDT 127 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L + + +L + A Sbjct: 128 VLATIT--------------------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIA 167 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ ++ + + +W +R +++A + +I AKLSAFA+S+ G++G A Sbjct: 168 VVLEFISHSRLGASWLAVRHSKRAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGT 227 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + + F +++ + ++ + G +++ EL +N + F Sbjct: 228 LVAENFSMMQSLALFAVATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALG 287 Query: 316 FNMR 319 Sbjct: 288 AVQA 291 >gi|239905225|ref|YP_002951964.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239795089|dbj|BAH74078.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 297 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 93/305 (30%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ + +GAY + L + + + Sbjct: 10 MLNSLTLGSLYALVAIGYTMVYGILRLINFAHSEMFMLGAYFVFWGITLANLPWPVAMVI 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ G+++ + + D I+ LI S L + Sbjct: 70 AIVVTATLGIVVDQVAYRPLRDAPRISALISSIGVSFFLQNVAIVFFQA----------I 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R V +V L L +I + RT R I + + Sbjct: 120 PREVYRPQWLENPIIMGGVRVLPLTLFVPLLSLALMLGLIWIVYRTKAGLGMRAISKDIE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + F + SA +G +A ++ P M + GG+ Sbjct: 180 TSYLMGVPVNRIIALTFGIGSALAAASGIMWALRYPQLQPIMGTI-PGFKAFIAAVFGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ L + + + F + L V++ + Sbjct: 239 GSIQGAVIGGLALGFIEIMT-----------VAFFPDLAGYRDAFAFVLLIAVLMFKPTG 287 Query: 339 LLRLR 343 LL R Sbjct: 288 LLGER 292 >gi|294851029|ref|ZP_06791705.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] gi|294821672|gb|EFG38668.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] Length = 160 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 2/146 (1%) Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 + AW +R+++ A SL KL+AFA + F G AG+FFAA + +SP+ F F Sbjct: 1 MPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAGSFFAARQGFVSPESFVF 60 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 E+ ++++IV+LGGM SL IA A ++IG E+ M+ + + D + + + Sbjct: 61 LESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FLKIIFGPDFTPELYRMLI 118 Query: 324 MVIALFLVILMRSHSLLRLRTPSNFL 349 +A+ +V++ + + R PS FL Sbjct: 119 FGLAMVVVMVWKPRGFVGSREPSAFL 144 >gi|229823474|ref|ZP_04449543.1| hypothetical protein GCWU000282_00772 [Catonella morbi ATCC 51271] gi|229787249|gb|EEP23363.1| hypothetical protein GCWU000282_00772 [Catonella morbi ATCC 51271] Length = 296 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 97/288 (33%), Gaps = 12/288 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G++ L++ +GA+ L + G+ +L + + Sbjct: 12 LFNGLSTGSIYALIALGYTMVYGTIRLINFAHGDILMMGAFFGFYLVNVQGMDFYLSLAL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+ + + K +A LI + +L G Sbjct: 72 TMVFTSVLGVTIERVAYKPLRKSTRVAALITAIGVSFLLENAMIYFFGPE---------- 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + F + + + L ++ ++ T + A R + +++ Sbjct: 122 -VKAYPTSFKTTTFKIMGAVINSKQVLIFVTTILLMVALQFIVKYTKMGKAMRAVAVDEE 180 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G+AG + ++++ M + + ++GG+ Sbjct: 181 AAQLMGINVDAVISFTFALGSALAGVAGVLYGLYSNQMAATM-GLTPGLKAFVAAVVGGI 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 S+ ++ + F + + + Sbjct: 240 GSIPGAMVGGYLIGLLETFVSAFGGSAFKDAAVYALLIVILLVLPAGL 287 >gi|295095869|emb|CBK84959.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 357 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 93/324 (28%), Gaps = 27/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 ++ ++ +IL Y + A L +V G G+LSL I +A+G Y+ + Sbjct: 42 PLAVSTWMLTLIGKILCYAVVAVALDLVWGYAGMLSLGHGIFFALGGYAMGMYLMRQAAG 101 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138 W +P + + L L + ++ Sbjct: 102 DGLPAFMSFLSWSELPWFWWGTQHFAWALVLIVTIPGLLALVFGWFAFRSKIKGVYFSIM 161 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G + + + F + I ++ + + L+ Sbjct: 162 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFSVTATTTRIALFLATVVLLLLALGTG 221 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 222 YALAKSKFGRILTAVRDAENRLTFCGYDPRGFKLLVWTLSAVLCGLAGALYVPQVGIINP 281 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + +I V LGG +L A++ G F + Sbjct: 282 GEMSPTNSIEAAIWVALGGRGTLVGPVIGAALVNGAKSF--------------FTVAMPE 327 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + + V L + L Sbjct: 328 YWQLFLGLIFIAVTLFLPRGVFGL 351 >gi|254427353|ref|ZP_05041060.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] gi|196193522|gb|EDX88481.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] Length = 380 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 96/347 (27%), Gaps = 36/347 (10%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L + + + +M + L Y A GL + G G+LSL I + +G Y Sbjct: 19 VLLAFLLVVIFPLALDAFRLNMIGKYLTYAFAALGLVLCWGRSGILSLGQGIFFGLGGYC 78 Query: 81 YVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + + S A L Sbjct: 79 MAMFLKLEASSPENTAIQSTPGIPDFMDWNQLTALPWFWEPFHSFSFTLIAVVAVPALLA 138 Query: 129 MSEIFQNILIKWKPITNGKAGIYVA----------DRLYFLGTTVRSLIRFFRFPSSFVI 178 + + + +A + L + Sbjct: 139 LIIAVAMFKRRVGGVYFAIITQAIAAILTILIIGQQGFTGGVNGITDLRTLMGWDIRTDE 198 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + +Y+V +GM FL I W+ R+ + +RD + + K+ F ++ Sbjct: 199 AKTALYFVCVGMLFLCLIIGAWVMRSKLGRILLAMRDQEDRVRFSGYDVASFKIFVFCLA 258 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + F G+ GA F +SP +I ++ + +GG SL I+ Sbjct: 259 AMFAGIGGAMFTLQVGFMSPSFVGIVPSIEMVILCAVGGRNSLLGAIYGALIVNAAKTF- 317 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F SF + + V+L L L Sbjct: 318 -------------FSESFPELWLYGLGVLFIAVVLAFPDGLAGLYRR 351 >gi|158316261|ref|YP_001508769.1| inner-membrane translocator [Frankia sp. EAN1pec] gi|158111666|gb|ABW13863.1| inner-membrane translocator [Frankia sp. EAN1pec] Length = 661 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 120/337 (35%), Gaps = 31/337 (9%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 +++ L +AV ++ L S + LI + ++ G G Sbjct: 320 PPPRHRWSVGLPAVAVGCAIVYVLSDAYLGSY-------VTSLIAGLVCLSFVVLTGYTG 372 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +SL + + A+ G+ L ++ + + +G+P+L+ RG +LA+ Sbjct: 373 QVSLAQMAIAGVSAFGLSKFAHGIGIPFPLAPLLAIGGAVLGALAVGIPALRVRGVHLAV 432 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 T+ ++ + + +T G +G V F F E Sbjct: 433 VTIALAVAVASAVFGNPAVTGGTSGSPVP--------------TLSIFGFDFRGGETGFA 478 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 V + + ++ + LR + + +R N++A S+ + KL AFA S G Sbjct: 479 VVTVLVLAVAGFAVANLRLSPVGLQMLAVRANERAAASVGINVARMKLLAFAFSGVLSGT 538 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG A ++ +S F ++ +++ LGG+T++S ++ N Sbjct: 539 AGVMLAYNQSNVSFQSFGAIASLSFLAVAYLGGITTISGAVVGGMLV----------NGG 588 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ + + L + ++ + Sbjct: 589 LMTLALQNWFEIGSYQLLVSGVGLIVTAVLNPQGISG 625 Score = 41.4 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 72/297 (24%), Gaps = 7/297 (2%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y+ +Y G+ + S G ++L A AY + L L + + Sbjct: 7 YVLLGLGPGAVYAALGLGVVLTYRSSGTINLAYGAAALYPAYVFAQLNKTGELILPIPGV 66 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYV 152 G + L L + ++ + V Sbjct: 67 PPIYFGGVPSKAVALVVALLVAALLGVLIHLLVFRPLATEPALARVVASIGVLITIQAIV 126 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 R L+ + + L + + A + R T+ A R Sbjct: 127 IIRFDEQALQPVGLLPDDAVNLGDITVPADRLLLGLLVVLVCAVLAAVYRFTSFGLASRA 186 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 N K L + L +++ G+ G A + ++ Sbjct: 187 AATNPKGATLLGYSTDSLALVNSTIAAVLAGLFGILVAPITSL--QPTTLTLLIVPALAA 244 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++G TS A ++ + + ++ + Sbjct: 245 ALIGRFTSFGVTVAAALVVGILQSQIVLLQGKLEWLPRAGLGDALPFAVIVIAMFAV 301 >gi|239813383|ref|YP_002942293.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239799960|gb|ACS17027.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 327 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 132/325 (40%), Gaps = 29/325 (8%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 F + ++ ++L+ + A L+ ++G G+++L +GAY+ V L Sbjct: 19 AAFPLVAPLFGLEFYIGFVRRVLVVALAAASLNFILGFGGMVALGHAGFIGMGAYTVVAL 78 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 +S W++ P++A+++G ++G +L+ RG Y + TL ++++ +++ + Sbjct: 79 SDAGVVSAWVMWPLAALVAGLVAALIGTVALRTRGVYFIMTTLAVAQMLYFVVVSLRR-Y 137 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G + R P + E Y+V+L + L+ + ++ Sbjct: 138 GGDDGYTLMSRPT-------------LLPGLDLGNESNFYWVVLAIVALALWWLHRATQS 184 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 +A IRDN+ +L + +L AFA++ A G+AGA A +SP ++ Sbjct: 185 RFGHALMGIRDNETRMRALGYPVFKLQLVAFAIAGAIAGLAGALLAGGNGFVSPATMHWT 244 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 ++ ++ +V++GG+ + + + E ++ + Sbjct: 245 QSATLLVMVVIGGLGRSWGGPVGAVVWLVLEEALKQHTEHWH---------------MPL 289 Query: 325 VIALFLVILMRSHSLLRLRTPSNFL 349 + L V L L L L Sbjct: 290 GLLLIAVALWAPKGLAALYKRRLPL 314 >gi|221213700|ref|ZP_03586674.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221166489|gb|EED98961.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia multivorans CGD1] Length = 325 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 19/314 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G + +++ +GA + S Sbjct: 17 LINGLVLGSVYAIIALGYTMVYGIIAIINFAHADVLMVGAMVSLSAISVLQRHFPNLGNV 76 Query: 94 ----LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + +++ A G + + + +A LI + +L I G Sbjct: 77 PTLLVALAMASAACAAVGYTIERVAYRPLRRAPRLAPLITAIGVSILLQTLAMIIWG--- 133 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 L T + V+ + +++ + A ++L + +T + + Sbjct: 134 -RNPLPFPQLLPTDPIALVHAGANGPGVVISMTEIVIIVVAFIMMAGLLLLVHKTKLGRS 192 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R I ++ + F F + SA + G A+ I M F I Sbjct: 193 MRAIAESHLVASLMGVNPNFVISVTFMLGSALAALGGLMIASEYGNIHFYM-GFIPGIKA 251 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ +L +L + +L G + + I L Sbjct: 252 FTAAVLGGIGNLGGAMVGGIVLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLI 306 Query: 330 LVILMRSHSLLRLR 343 +V++ R LL R Sbjct: 307 VVLVFRPSGLLGER 320 >gi|163868304|ref|YP_001609513.1| permease protein of ABC transporter [Bartonella tribocorum CIP 105476] gi|161017960|emb|CAK01518.1| permease protein of ABC transporter [Bartonella tribocorum CIP 105476] Length = 352 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 117/339 (34%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K ++ L++FLF Y + I I + A L+++ G G+ S Sbjct: 1 MAKSTTTFLSCISIFVLIVFLFYADNHFNDYTLRIINLIAINAILAISLNLIYGFTGMFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY IL ++ + I+ + + L A + Sbjct: 61 LGHAGFMAIGAYICAILLLSPEQK--EMMWILEPIAEPLSHLQLPFFIAVVVSGLCAAII 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + + + G R+ T + + Y L Sbjct: 119 GLLIALPILRLGGDYLGIATLGFAEIIRIVITNATSFTNGSLGIKGIPQEATLWWNYGWL 178 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ R+ N R IRD++ A ++ F + +F V + F G+ GA Sbjct: 179 AFTVLFIVLLL----RSNTGNVLRAIRDDEIAAKTMGINAFFYRSFSFTVGAFFAGIGGA 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I P MF F ++ IV+ GG+ S++ + I+ ++E + + Sbjct: 235 LMAALISTIDPKMFNFLLTFNILMIVVAGGLGSITGSIIGSIIITVMLEWLRIIESPFDL 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + + L ++IL L+ R S Sbjct: 295 GFIHIP-ETPGLRMVVFSLLLLVIILFWRKGLMGQREFS 332 >gi|54020364|ref|YP_115660.1| putative ribose ABC transporter [Mycoplasma hyopneumoniae 232] gi|53987537|gb|AAV27738.1| ribose ABC transporter [Mycoplasma hyopneumoniae 232] Length = 604 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 99/323 (30%), Gaps = 27/323 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 K+L L ++ + L + S + ++ + A G ++V+ G + L+ Sbjct: 288 TKLLILFLIIAFITGALNVNFFSSYNWFVAILKNNIFIGFIALGQTLVI-LTGGIDLSVG 346 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 GA Y++L + GL ++ + +I A G++ G+ KF+ + + Sbjct: 347 SLIGFGATIYLLLTVKLGLHFVAVLFILIIILAAIGILNGILISKFKIPPFIVTLAGLLS 406 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + I I K T + + F ++L Sbjct: 407 LRGAIAILLKG-------------------TPITNAQDPIFNFFNYNLGSNFSVLVLVFI 447 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 A +I +++ + + DN A + + S F + GA + Sbjct: 448 ITVAVLIFFIKFSKFGRYVYAVGDNPVAATFSGIKNNKILILVYMFSGIFA-ILGALSIS 506 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 S + + ++ V+LGG A + + Sbjct: 507 SGTTSVSPNTGYGFELDTVTAVVLGG------TALTGGKGGVGKTIIGWFAMALLLNTFS 560 Query: 312 FDCSFNMRHTTLMVIALFLVILM 334 F + I + L IL Sbjct: 561 FFQLDSNFQLVAKGIIIVLAILF 583 >gi|329906614|ref|ZP_08274461.1| ABC transporter permease protein [Oxalobacteraceae bacterium IMCC9480] gi|327547212|gb|EGF32069.1| ABC transporter permease protein [Oxalobacteraceae bacterium IMCC9480] Length = 359 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 120/336 (35%), Gaps = 11/336 (3%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 ++ +L F ++ +ILI+++ +++G G++S + + Sbjct: 15 WLTALLLLIVLGLAFAPFIFPGAKALNVAAKILIFIVLVASYDLLLGYTGIVSFAHTMFF 74 Query: 75 AIGAYSYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IGAY I +R G + I + ++S +++GL SL+ R + A+ TL ++ Sbjct: 75 GIGAYGVAIASTRMGPGWLALGVGIVAALLLSLVLSLLIGLFSLRVRAIFYAMITLAVAA 134 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 FQ + + +T G+ G+ S F + YY+L Sbjct: 135 AFQTLASQLSELTGGEDGLSFKLPEMLTPAFRFSESTLFGVTPDG---RLLTYYLLFAST 191 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + ++L + + + IR+N ++ + + + +++ F +AGA A Sbjct: 192 VVLFLMLLRIVNSPFGRVLQAIRENDFRAEAIGYRTVVFRTLSNVLAALFATLAGALLAI 251 Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 F I ++ IV++GGM +L + I + + Sbjct: 252 WLRYNGADTSLSFEIMIDILLIVVIGGMGTLYGAVCGATLFILAQSYLQDLMGMAARATE 311 Query: 311 KFDCSFNMR----HTTLMVIALFLVILMRSHSLLRL 342 + + I L + ++ Sbjct: 312 SVPLLSALLSPDRWLLWLGILFILSVYFFPSGIVGR 347 >gi|227819873|ref|YP_002823844.1| branched-chain amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|36958762|gb|AAQ87230.1| Branched-chain amino acid transport system permease protein LivM [Sinorhizobium fredii NGR234] gi|227338872|gb|ACP23091.1| branched-chain amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 335 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 72/327 (22%), Positives = 132/327 (40%), Gaps = 28/327 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L+ ++ + Y + GL++++G G + L + +GAY+ Sbjct: 11 LVLVAAALGSPLVVPDFLLFEISIAVSYGIAILGLNLLLGFTGQICLAQGALFGVGAYTT 70 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 IL +GL +P++A+ +G G+I+GLP+L+ +G LAI T ++ F +L+K Sbjct: 71 AILNVSFGLDPLATLPLAAVSAGLIGVIIGLPALRLQGLQLAIITFGVASAFPQLLLKMD 130 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 +T G G+ E ++Y V L +S ++ L Sbjct: 131 TLTGGVTGLATDQPFAPKWF--------------PGSQEAWLYGVSLICAAISIMVVTRL 176 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R R +RDN +L + +L+AFAVSSA G+ G F ISP F Sbjct: 177 LRGDTGRLMRALRDNPVIAEALGVNLTKGRLAAFAVSSALAGLGGGLFCILNGFISPQSF 236 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 ++I ++ I+GG+TS++ ++ V +N Sbjct: 237 LPMKSIDILIGGIVGGITSIAGAFIGAGFVVFVPGFTTDINPALGG-------------- 282 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNF 348 + + L ++++ + LR + Sbjct: 283 LIYGLCLIAMMMVARQGIAGLRIETFL 309 >gi|323701777|ref|ZP_08113448.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] gi|323533313|gb|EGB23181.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] Length = 290 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 91/304 (29%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G + L++ Y +GA+ V++ S + + + + Sbjct: 6 LLNGITLGATYALIALGYTMVYGIIQLINFAHGEIYMVGAFIGVLMVSVFHQGLLISLCA 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G+ + + + +A LI + L G Sbjct: 66 AMAFCMIMGVAIERVAYRPLRRSTRLAPLISAIGVSIFLQTLMTKIEGPQ---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I + + +L+ L + ++ I A R ++ Sbjct: 116 -AVAFPHVINDSLYHMGAIEISKIQLIILVVSSLLMLGLHFIVKYVKIGKAMRAASEDYD 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ SA G + ++P M + +LGG+ Sbjct: 175 TAALMGINVNRVISFTFAIGSALAAAGGVLVGMYFNSVAPLM-GVLAGLKAFCAAVLGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ L L F++ + L +V+L R Sbjct: 234 GSIPGAMLGGLFLGVAETL-------------GVAGGFDLYKDAIAFTMLIVVLLFRPTG 280 Query: 339 LLRL 342 LL Sbjct: 281 LLGR 284 >gi|89092362|ref|ZP_01165316.1| possible ABC transporter, permease protein precursor [Oceanospirillum sp. MED92] gi|89083450|gb|EAR62668.1| possible ABC transporter, permease protein precursor [Oceanospirillum sp. MED92] Length = 308 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 114/318 (35%), Gaps = 27/318 (8%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 + + LG +++L + +FA ++++G +GLLS G Y + Sbjct: 8 VALVALGLVAPFILYPVFVMKVLCFALFACAFNLLLGYVGLLSFGHAAFLGTGGYITGYM 67 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 GL+ L I + G + G ++K G Y A+ TL +S++ + ++ T Sbjct: 68 MMEAGLTPELGILCGTAAAATLGAVYGKLAVKREGIYFAMVTLALSQLAFFVYLQAP-FT 126 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G+ G+ R F + + MYY + + ++ + Sbjct: 127 GGEDGMQGVPR-------------GHLFGLIDLSDNMNMYYFVFAIFLFGFWVVNRTIHS 173 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + IR+N+ SL + K +AF +SSA G+AG+ S + Sbjct: 174 PFGQILKAIRENEPRAISLGYNVNDYKWAAFVISSALAGLAGSTKTLVFQLASLTDAHWH 233 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + V+ + +LGGM ++ ++ + G +M Sbjct: 234 MSGEVVLMTLLGGMGTIFGPIVGAGAVVTIQNYLSG-------------GELGNYIHIIM 280 Query: 325 VIALFLVILMRSHSLLRL 342 + + +L ++ Sbjct: 281 GLIFVVCVLAFRSGIVGE 298 >gi|317404908|gb|EFV85276.1| high-affinity branched-chain amino acid transport system [Achromobacter xylosoxidans C54] Length = 308 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 101/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + IY + A G ++V G +G+++ Y IGAY ++ + Sbjct: 12 FFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTNSGLPVPF 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I ++ V+ +++G G + + + + LI + L W + G Sbjct: 72 IIAAMLLVAIVVTGIYGFSVERVAYRPVRGSPRLVALISAIGMSIFLQNWVALGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++F V ++L L + L+++ + + A Sbjct: 129 ----RDMAVPSLVSGAVQFHMGSDFDVTVPYSRIMIILVTVVLMIGLTLFIKYSRMGRAS 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + L F + + + G A + +++ F I Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFVMGAILAAVGGVLIAITIGKLN-PFIGFLAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAFS-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|229017275|ref|ZP_04174180.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus AH1273] gi|228744028|gb|EEL94125.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus AH1273] Length = 333 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 130/334 (38%), Gaps = 31/334 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V+ L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VFMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFFIGIAAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YY+ + Sbjct: 135 EKWRSLTHGGDGFTFGVPDIFRDRF-------------------TFYYITFICLISIFIL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R T ++ + +V+L+ L+ +R Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKKLKNFKR 320 >gi|330899633|gb|EGH31052.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str. M301072PT] Length = 529 Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|238798911|ref|ZP_04642376.1| Branched-chain amino acid transport system, permease component [Yersinia mollaretii ATCC 43969] gi|238717221|gb|EEQ09072.1| Branched-chain amino acid transport system, permease component [Yersinia mollaretii ATCC 43969] Length = 533 Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS + S + + + +++ + Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYWVQSLFQQFAPHWLALYPLVALPVAFFITAGIGMA 319 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQSVRMIFGAQNLEVANPGWLSGGLQILPNL 377 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I V+ + + L L +T + R + N+ + AF + Sbjct: 378 ILPWNRIAVIAFVVIVLLFTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 437 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L + ++ Sbjct: 438 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 496 LEPQMGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530 >gi|254446303|ref|ZP_05059779.1| amino acid or sugar ABC transport system, permease protein, putative [Verrucomicrobiae bacterium DG1235] gi|198260611|gb|EDY84919.1| amino acid or sugar ABC transport system, permease protein, putative [Verrucomicrobiae bacterium DG1235] Length = 381 Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 53/372 (14%), Positives = 118/372 (31%), Gaps = 44/372 (11%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ----KYIDSMGIQILIYVMFAWGL 56 M +F ++ + + ++ L S + S+ + + Y + A L Sbjct: 1 MKLFDNKIEFGGYLSACVVLLLILPAMNAFFPEGSSMHFSSFQLSLWGKYITYAVMAMSL 60 Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG----------------------LSIWL 94 +++ G GLL L + +A+GAY++ + + W Sbjct: 61 NLLWGYTGLLCLCQSLFFALGAYAFGMYLMLHVGVDSVYNTALPDFMDFQGYTALPWYWA 120 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI----KWKPITNGKAGI 150 A A ++ G+ + F + + N Sbjct: 121 PFENGAFAIAATLLVPGVLAFVFGFLAFRSRIKGVYFSILTQALTYAASLFFFKNNLDLF 180 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L+ + F + + + +++ + + + +I WL RT Sbjct: 181 GNNFILFGGNNGLTDFKEIFGYDVNAASTQRWIFVMSAILMLVVYLVISWLLRTKFGKVQ 240 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 + IRD++ + K+ F +S G+AGAF+ I+ + ++++ V+ Sbjct: 241 QAIRDSENRVRFSGYSTTTYKMLIFVGTSMVAGIAGAFYVPQVGGINANEMSPAKSLDVV 300 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 V LGG + ++ + M + ++ L Sbjct: 301 VWVALGGRGTKFGPIIGAIVVNIIKSFTTRM--------------YPDYWLIILGAIFML 346 Query: 331 VILMRSHSLLRL 342 V+L + L+ L Sbjct: 347 VVLFMPNGLVGL 358 >gi|134095639|ref|YP_001100714.1| high-affinity branched-chain amino acid ABC transporter membrane protein [Herminiimonas arsenicoxydans] gi|133739542|emb|CAL62593.1| Putative high-affinity branched-chain amino acid transport system permease protein BraD/LivH-like [Herminiimonas arsenicoxydans] Length = 309 Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 96/305 (31%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G L L++ IGA + + + L + Sbjct: 8 IINGLVLGSMYALVALGYTMVYGVLNLINFAHGDVLMIGAMAGLTILKMLNTVAPDLPGI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +I G I ++ + +A L + ++ + + Sbjct: 68 VKLIIAILGAIPVCVAVNVLIERVAYRRLRNAPRLAPLITAIGVSILLQTFAMMIWGRS- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + +L+ + L + +T + A R +N + Sbjct: 127 -PLPFPQVMPGEPLHILGALISPTQVMLLILAAASMLLLALLIEKTKLGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +AA+ M F + S +LGG+ Sbjct: 186 VAGLMGVDSNRVIVMTFVIGATLAAIAGVMWAANYSSAQFAM-GFVPGLKAFSAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + L G L + + L +V+ +R Sbjct: 245 GNIYGAMLGGILLGLIESLGAGYIGDLTGGFLG-----SHYQDIFAFVVLIIVLTLRPSG 299 Query: 339 LLRLR 343 ++ R Sbjct: 300 IMGER 304 >gi|313885609|ref|ZP_07819359.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Eremococcus coleocola ACS-139-V-Col8] gi|312619339|gb|EFR30778.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Eremococcus coleocola ACS-139-V-Col8] Length = 292 Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 104/288 (36%), Gaps = 12/288 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G++ L++ Y +GA++ L + ++I+L + V Sbjct: 8 MVNGIALGSIYALIALGYTMVYGTIKLINFAHGEVYMLGAFTGFYLVTVLQVNIFLAMVV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+I+ + K + +A LI + L G Sbjct: 68 AMLATSLLGVIIERVAYKPLRNSTRVAALITAIGVSFFLQNIMIYFVGPE---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S I+ ++ V++ L ++ L +++T + A R + + + Sbjct: 118 -VKAFPSPIKVTILKVFGLVITSKQILVVVMTVILMVALQLIVQKTKMGKAMRAVAVDPE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S G+AG + I M + + ++GG+ Sbjct: 177 AAQLMGINVDRVISFTFALGSGLAGIAGILVGIYYNSIQATM-GTAPGLKAFIAAVIGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 S+ ++ + L + F + + + + + Sbjct: 236 GSIPGAMVGGYLIGILETLVTVLGFSNYKDAVVYPLLIIILLVLPSGL 283 >gi|293606879|ref|ZP_06689227.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292814731|gb|EFF73864.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 625 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 62/309 (20%), Positives = 129/309 (41%), Gaps = 33/309 (10%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 T Y+ + +ILI +FA L + G G+ S + +GAY +L L + Sbjct: 340 TLQWPYLGILMTEILIAALFAASLHFLTGLAGMTSFGHAAWFGLGAYGAALLLKLAALPM 399 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + + + ++ G ++ G YLA+ TL +++I + +W +T G G+ Sbjct: 400 EAALLLGPFAAAFGALLFGWFCVRLSGVYLAMLTLAVAQILWAMAYQWDDVTGGSNGL-- 457 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 +PS+++ + YYV LG+C + + L + + A R Sbjct: 458 ----------------IGLWPSAWLAQGPWFYYVTLGLCAAGIAWLRRLAFSPLGYALRG 501 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 +RD+ +L + + F +S G+AG+ +A S+ I+PD+ S ++ + + Sbjct: 502 VRDSPLRAEALGIETRRVQWAGFVAASFAAGIAGSLYAFSKGSIAPDVLAVSRSVDGLVM 561 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V+LGG+ +L+ A + ++ Y+ ++ +A+ ++ Sbjct: 562 VLLGGLQTLAGPLVGAAAYTWLQDVAARSTEYWHA---------------VLGLAILALV 606 Query: 333 LMRSHSLLR 341 ++ L Sbjct: 607 MVFPDGLAG 615 Score = 54.1 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 97/303 (32%), Gaps = 17/303 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLIPV 98 + + A GLS++ G +++ Y +G Y +G + WL + + Sbjct: 12 NGLADASALFLVAAGLSLIFGVTRVVNFAHGSFYMLGIYLAWTFTQWFGTGAAYWLGLLL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A+++G G LK + L+ + I+ G ++ A Sbjct: 72 AALVTGLIGAAAEWLVLKRLYRAPELFQLLATFALVLIIGDAALAIWGPEDLFAACAPGL 131 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G Y + ++ + + L L RT R +N+ Sbjct: 132 SGA----------VQILGRRYPEYDLLLIAAGPVVLGLLWLLLMRTRWGRLLRAASENRS 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L + SAF + + G+ GA A +V++GG+ Sbjct: 182 MLAALGVNQAWLFTSAFTLGAFLAGLGGALAAPRVPA--TLGLDLEIIASAFVVVVVGGL 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A ++ V + + + + + + +V+++R Sbjct: 240 GSIPGAFLAALLICCVKAVFVFLGQVAIG---PWVFNLSKLTLLAEFAVMAVVLVVRPWG 296 Query: 339 LLR 341 LL Sbjct: 297 LLG 299 >gi|94311798|ref|YP_585008.1| inner-membrane translocator [Cupriavidus metallidurans CH34] gi|93355650|gb|ABF09739.1| leucine/isoleucine/valine transporter subunit, membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 311 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 98/305 (32%), Gaps = 6/305 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++V G LG+++ IGA + + L Sbjct: 8 IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGALTALSAIMGLQKFAPGLPEW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + L + + +A L + ++ + + Sbjct: 68 LTLVIATLIAMPVCAVLAYTIERVAYRPLRNAPRLAPLITAIGVSIILQTMGMLIWSRNP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L S+ ++ + A ++ + RT + A R +NQK Sbjct: 128 LTFPQLLPSSPIDIGSTGATITGKEIVIIGLAVMVMAGLLALVNRTKLGRAMRATAENQK 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + F + +A +AG A + M F + + +LGG+ Sbjct: 188 VAGLMGVNPNFVISATFMIGAALAALAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L + L G N + + I L +V++ R Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTNGVFG-----SNYQDVFAFIVLIIVLVFRPSG 301 Query: 339 LLRLR 343 ++ R Sbjct: 302 IMGER 306 >gi|296158151|ref|ZP_06840983.1| inner-membrane translocator [Burkholderia sp. Ch1-1] gi|295891487|gb|EFG71273.1| inner-membrane translocator [Burkholderia sp. Ch1-1] Length = 430 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 111/326 (34%), Gaps = 27/326 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + +L Q ++ + Q ++FA ++++G GLLS Sbjct: 21 ALAPWLALILFLGVPPFIWPQSWLLAYLAQTATMIVFALSYNLLLGETGLLSFGHAAYSG 80 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GA L +R G+ + LL V + CG+++G S + G A+ TL + E+ Sbjct: 81 LGALVAAQLFNRVGVPLVLLPLVGGIGGALCGLLLGFISTRRAGTAFAMITLGLGELVAA 140 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 G+AG+ + ++ Y ++ C L+ Sbjct: 141 AAWTLPDWFGGEAGVAI------------DRASGAQWAGWSFGPAREAYALIAVWCLLAC 188 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + + L RT +RDN ++ + +S+ F G++G + + Sbjct: 189 AALFALSRTPFMRLANAVRDNPVRAAAIGCYPRRIRYGVVVLSAFFAGISGTLALINVEL 248 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +S + + V+ ++GG + +L + + + Sbjct: 249 VSTESVGMMRSGAVLIATVIGGTAAFFGPVAGAVVLTFFSVVVASVTRAW---------- 298 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + +V+++ L Sbjct: 299 -----LFYLGLFFIVVVVISPDGLAG 319 >gi|238028400|ref|YP_002912631.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia glumae BGR1] gi|237877594|gb|ACR29927.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 316 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 101/310 (32%), Gaps = 11/310 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + + +Y + A G ++V G LG+++ IGA + + Sbjct: 8 VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + +I+ A ++G + L A + I + Sbjct: 68 ATLTIGLVIAAAVCAVVGFAIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L +T + + + ++ + A ++L + +T + A R I Sbjct: 128 LPFPQLLSTNPLNVIAATDTTPGAVISATEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +N + F + F + SA +AG A+ + M F + + Sbjct: 188 SENPNNASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L +L + +L G + + + L +V++ Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIVVLV 301 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 302 FRPSGLLGER 311 >gi|90420046|ref|ZP_01227954.1| putative permease protein, ABC-type branched-chain amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90335380|gb|EAS49130.1| putative permease protein, ABC-type branched-chain amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 428 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 119/326 (36%), Gaps = 34/326 (10%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ +L L + + + +LI +FA ++++G GLLS + +GA+ Sbjct: 9 ILAGILALLIVVPPFLDISWQNALVNVLIASLFALAFNLLIGQAGLLSFGHAAYFGVGAF 68 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD----YLAIATLIMSEIFQN 135 + + L + L P+ A G+++GL + F Y A+ TL ++E+F + Sbjct: 69 AALHLMIAVEDGLPLPTPLLPFAGAAAGLLVGLIAGYFSTMRSGVYFALVTLAIAELFHS 128 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + + G++GI + T + +YY+ LG + Sbjct: 129 LAPRLQDLFGGESGISSMRMPWQGLTF---------------GSLLEVYYLTLGWVVICG 173 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + RT +RDN++ L +K+ FAVS+ G+AG+ A S + Sbjct: 174 LGLWAFTRTPFGRLTLALRDNEQRVRFLGYNAHASKVVIFAVSAMVAGVAGSLQAISNET 233 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + +F + V+ +GG T L + + Sbjct: 234 ANYSLFATDVSAQVVLQTFVGGSTVFFGPVIGATAFTLFSFLVSDLTRSWV--------- 284 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + LV+L + Sbjct: 285 ------FYQGLIFVLVMLYMPTGIGG 304 >gi|271963515|ref|YP_003337711.1| branched-chain amino acid ABC transporter ATPase-like protein [Streptosporangium roseum DSM 43021] gi|270506690|gb|ACZ84968.1| ABC-type branched-chain amino acid transport systems ATPase component-like protein [Streptosporangium roseum DSM 43021] Length = 898 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 106/293 (36%), Gaps = 16/293 (5%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + + S+ Q L+ + +V G G+++L ++ A + S + + Sbjct: 346 ADDFYVSVVAQGLVLGLIFCSFVVVTGIGGMVNLAQASFASMAALTCGWAFSSGLP-LPV 404 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 I + + + A G+++ LP+L+ G L +ATL ++ + +L + +NG G + Sbjct: 405 AILLGVLGATAVGVLVALPALRLGGRILTLATLALALLADQVLFQIDAFSNGTIGWPLPA 464 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + +LL + L ++ L R+A A +R Sbjct: 465 ---------------IGLGFTDTTDPRVRVVLLLALIGLVGLLVRNLERSASGRAVLAVR 509 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 A + + K+ FA++S G+ G FA + ++ + +++V+ Sbjct: 510 SAPAAATTSGISAPRTKIMLFALASGIAGLGGVLFATFKGSVTATDLPAFAGFVWLAVVV 569 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 L G+ + I EL G + + F + + Sbjct: 570 LQGVRRIGGAVLGGLIAAVFPELLSGWHISAHVGAILFGLGGMILARHPDGVL 622 Score = 63.0 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 83/297 (27%), Gaps = 9/297 (3%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 YI S + ++ + A GL++ + G+ + + A + L + GL W Sbjct: 7 YIVSGLVTGAVFAVMASGLTLSYSATGVFNFAHGAVGFLAALLFFELNAGLGLPAWAAGL 66 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN---GKAGIYVAD 154 V+ + + ++ I+ I I + + + Sbjct: 67 VAVGLFSPLLGYVLHRAMFRGLAQAGETAQIVGTIGLTIALPALGLWIVDLTAEPFGLPR 126 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 F V + +A + ++R T R Sbjct: 127 ADATSLPHGLGPYPAVTFTFGGVHLDSDQLITFAFAVLAAAGLWAFMRHTPYGLRMRASV 186 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 D ++ + A+ + SA G+AG ++ S + + + Sbjct: 187 DRRRLATLRGIDADASSAMAWTLGSALAGLAGVLAVSTLGLDSTAFTVML--FVSATAAV 244 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 G + S+ A L V L G + L+ + L L+ Sbjct: 245 FGRLRSIPWTFAAGLGLGVVQNLVAGYADF----AEDVTGLRTAVPVILLFVGLILL 297 >gi|167564636|ref|ZP_02357552.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia oklahomensis EO147] Length = 324 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 119/302 (39%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + Sbjct: 26 FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTTPELGVLAGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+ +GL +++ +G Y A+ TL +++ I ++ Sbjct: 86 AATLLGLAVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ--------------APFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + + I+ + + I++N+ Sbjct: 132 GLQGVPRGRLFGLVDLSSDLALYYVVLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAT 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AGA + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + S T + + +L ++ Sbjct: 252 FGPLVGAALIVALEDRLGDIGGWLASATGIDWFRSLGESATIVTGLIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|53726288|ref|YP_103744.1| branched-chain ABC transporter permease [Burkholderia mallei ATCC 23344] gi|67644005|ref|ZP_00442748.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei GB8 horse 4] gi|121598470|ref|YP_992076.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124383409|ref|YP_001028521.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126451332|ref|YP_001081581.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|251766564|ref|ZP_04819708.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei PRL-20] gi|254202447|ref|ZP_04908810.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei FMH] gi|254207779|ref|ZP_04914129.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei JHU] gi|52429711|gb|AAU50304.1| branched-chain ABC transporter, permease protein, putative [Burkholderia mallei ATCC 23344] gi|121227280|gb|ABM49798.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124291429|gb|ABN00698.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei NCTC 10229] gi|126244202|gb|ABO07295.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei NCTC 10247] gi|147746694|gb|EDK53771.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei FMH] gi|147751673|gb|EDK58740.1| putative amino acid ABC transporter, permease protein [Burkholderia mallei JHU] gi|238525487|gb|EEP88915.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei GB8 horse 4] gi|243065450|gb|EES47636.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei PRL-20] Length = 340 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 92/343 (26%), Gaps = 32/343 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V L+ A Y ++ +++ Y + A L +V G G+LSL + +A+G Sbjct: 1 MGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLFFALG 60 Query: 78 AYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 Y+ + ++ L Sbjct: 61 GYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPAALAW 120 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 + + +I Y + + R F + Sbjct: 121 VFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAITSPGT 180 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + S + + + IRD + L + + KL + VS+ Sbjct: 181 RTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVWVVSA 240 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +AGA + I+P +I + V +GG +L + G + Sbjct: 241 VLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAKSVFT 300 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 301 AY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 329 >gi|312961720|ref|ZP_07776218.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311283979|gb|EFQ62562.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 349 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 67/326 (20%), Positives = 131/326 (40%), Gaps = 16/326 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L F+ + + +++++ I L+ + GL+++ G G S+ A+GA Sbjct: 23 LLGLLTLAFVVVPLWGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFMAVGA 82 Query: 79 Y-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + +Y L L + + + +IS G++ GLPS + +G YL + TL + + Sbjct: 83 FATYGFLLRLPELGLPVALLGGGIISALVGLLFGLPSSRIKGFYLMVTTLAAQFFLEWLF 142 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +K+ N + ++ L + + Y++ L L Sbjct: 143 VKFPWFYNYGSSGTISAPKLALFGH-------------DLNTPLGRYWLTLVTVLLLTWT 189 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRI 256 L L R+ + W IRD A + + K AFAVSS ++G+AGA +A A Sbjct: 190 ALNLVRSQVGRNWMAIRDMDTAAAVVGIPVARYKRLAFAVSSFYLGIAGALWAFAYLGTA 249 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 S F + + ++ I+I+GGM S++ A + + F + Sbjct: 250 SASSFDINRSFQILFIIIIGGMGSIAGNFVGAAFISLLPIFLSHAGQALFGGSVDAG-QL 308 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + ++ L+RL Sbjct: 309 QNLQKIIFGVLIIVFLIKEPEGLIRL 334 >gi|291532755|emb|CBL05868.1| amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [Megamonas hypermegale ART12/1] Length = 289 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 114/313 (36%), Gaps = 41/313 (13%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + + + + ++ A L+++ G G SL A+GAY VIL + Sbjct: 5 IIGSFWELNIFLVCVNIIMAASLNLINGYTGQFSLGHAGFMAVGAYVGVILTVNFHSPFI 64 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + + +G G ++GLP+L+ +GDYLAIATL + EI + +++ + + + Sbjct: 65 VALLIGGFAAGILGFLIGLPTLRLKGDYLAIATLGLGEIIRIVIMNIEYVGGAAGFKGIP 124 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 F + + + I + + + Sbjct: 125 HNTTFPW--------------------------VFFIMLFTLFFIKNFVNSKYGRSCIAV 158 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+N+ A ++ K+ AF + + F G+ G FA I+P F F + + +V Sbjct: 159 RENEIAAEAMGVNTTKYKVMAFTIGAIFAGIGGGLFAHCFYIINPSSFTFMASFNFLIMV 218 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ S++ ++ V + + L L++ Sbjct: 219 VLGGLGSITGSIAGAFVVTFVSAALAS---------------WPEFRMIAYALVLILLMF 263 Query: 334 MRSHSLLRLRTPS 346 R L + Sbjct: 264 YRPQGLFGYTEIT 276 >gi|284164842|ref|YP_003403121.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] gi|284014497|gb|ADB60448.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] Length = 368 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 101/307 (32%), Gaps = 15/307 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y +G L Y + L+ + G G+LS V + IG Y++ ++ + Sbjct: 49 YYAAEIGAVFLAYALLGVSLAFIWGYCGILSFGQVAFFGIGGYAFGVVAINVPTLTGATL 108 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + A ++ + + L F G + I++ + +L + T G RL Sbjct: 109 GLLAAVAVSTLVAAALGYFMFYGGVRDVYVTILTLVVALVLYTFMGQTAGGEWAIGDARL 168 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFM-YYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 S + I YYV LG + + L + A R+ Sbjct: 169 GGFNGMSGVPDLGIGIGSIGLEIGIVGHYYVTLGALAATYLGLRALVNSRFGYAMVATRE 228 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ F K + F + A G++G F + I P +F + + + + Sbjct: 229 DESRTEMFGYNTTFIKFAVFTIGGAIAGLSGVLFTTQNNYIDPSVFGITAAALPVVWASV 288 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG TSL A + V + S + ++ L V+L+ Sbjct: 289 GGRTSLLGTVGAALAIQFVD--------------YQLALSGSEWALVIIGSLLVFVVLVM 334 Query: 336 SHSLLRL 342 + Sbjct: 335 PEGVAPR 341 >gi|222082930|ref|YP_002542295.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727609|gb|ACM30698.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 349 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 129/328 (39%), Gaps = 16/328 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + +L + S +++ + L + GL+++ G G +SL A+ Sbjct: 20 LAPAAVIAVAYLVVPFIGSTYLYEAILVPFLALSLAGVGLNLLTGYAGQVSLGSAAFMAV 79 Query: 77 GAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ R + + I ++ + + A G++ GLPSL+ +G YLA++TL Q Sbjct: 80 GAFAAYNFNLRVDGLPLIVSILLAGLCAAAVGIVFGLPSLRLKGFYLAVSTLAAQFFVQW 139 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L K+ +N A + + Y L + + Sbjct: 140 ALTKFSWFSNDSASGVIDAPPLT-------------LAGVEFTGPVGRYLFSLTVVVVLT 186 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + L + + +RDN+ A + ++ KL AFA+SS I +AG +A A Sbjct: 187 FLAHRLATSQTGRNFIAVRDNETAARIIGVPVLKTKLLAFAISSFIIAVAGVLWAFAYLR 246 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F + ++ I+I+GG+ S A+++ + + + L Sbjct: 247 TVEPAGFNLDRSFQILFIIIIGGLASTRGAFFGAALIVVFPLILSRLGSFLLGDLFDSGV 306 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 +M ++ + L +++ L L Sbjct: 307 -LDMSQRIVLGALIILFLILEPDGLSSL 333 >gi|331004944|ref|ZP_08328356.1| High-affinity branched-chain amino acid transport system permease protein LivH [gamma proteobacterium IMCC1989] gi|330421242|gb|EGG95496.1| High-affinity branched-chain amino acid transport system permease protein LivH [gamma proteobacterium IMCC1989] Length = 307 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 89/310 (28%), Gaps = 14/310 (4%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + Y + A G ++V G +G+++ Y IG Y I + + Sbjct: 5 FFYFLQQLLNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGTYVTFIAITGLTML 64 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 +P+ + + ++ + + I I + Sbjct: 65 GIEYMPLVILCALIIAIVASCSFGWAIERTAYRPLRGTNRLIPLISAIGMSIFLQNYLVQ 124 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + F + + + ++ ++ ++ + A R Sbjct: 125 AQGARDIGLPPMITGGWSFGPDNFQASVSYMQLIIFIATAVSMLALTTFISKSKMGRACR 184 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 + + + L + F + +A +AG I+ F + + Sbjct: 185 AVAQDLQMANLLGINTNRVISTTFVIGAALAALAGVLLGLYYG-IANPYIGFIAGLKAFT 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +LGG+ S+ IL G + ++ F L L+ Sbjct: 244 AAVLGGIGSIPGAMLGGLILGVTESFTAGYFSAEYKDVVAFS-------------LLVLI 290 Query: 332 ILMRSHSLLR 341 +L R LL Sbjct: 291 LLFRPTGLLG 300 >gi|317125181|ref|YP_004099293.1| amino acid/amide ABC transporter membrane protein 2, HAAT family; amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Intrasporangium calvum DSM 43043] gi|315589269|gb|ADU48566.1| amino acid/amide ABC transporter membrane protein 2, HAAT family; amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Intrasporangium calvum DSM 43043] Length = 567 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 106/267 (39%), Gaps = 33/267 (12%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-----GLSIWLL 95 + + + +FA+ V+ G LSL ++ A++ L R ++ + Sbjct: 5 ATLTFVALGAIFAYSFYAVL-VAGQLSLGQAGFASLAAFTAASLTPRPSEVGEIPALLIA 63 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + ++ A +++GLP++ RG +LAIATL +E + +++ + T G G+ V Sbjct: 64 IVIGMVVGSAAAVVLGLPTMHLRGVFLAIATLAFAEAVRILILNQEW-TGGAQGMSVPKV 122 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L + + + A + R+ A IR+ Sbjct: 123 LTPG--------------------------IAWAVLAVVAYWFARMGRSRYGRALEAIRE 156 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A ++ + +L+AF + A G+ G +A I+P+ F F+ I + ++ Sbjct: 157 DELAARAMGIDVGRHRLAAFTTAGAVAGLYGVLWAYYVRLIAPEDFGFTAAIDGLVTAVV 216 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMN 302 GG T + + E+ + Sbjct: 217 GGSTMFVGPLLGSGFQTLIPEIQRALG 243 >gi|192289855|ref|YP_001990460.1| urea ABC transporter permease [Rhodopseudomonas palustris TIE-1] gi|192283604|gb|ACE99984.1| urea ABC transporter, permease protein UrtC [Rhodopseudomonas palustris TIE-1] Length = 383 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 94/328 (28%), Gaps = 36/328 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84 + ++ + L Y A GL + G G+LSL + + +G Y + Sbjct: 31 DVFRLNLVAKYLTYAFVAIGLVLCWGFGGILSLGQGVFFGLGGYCMAMYLKLEASSVENT 90 Query: 85 -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + ++ + A + + Sbjct: 91 KIQSTPGIPDFMDWNQITQIPWFWQPFHSLTITVIAILVVPAVFAFLIGAAMFKRRVGGV 150 Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193 +A + L + + ++ +Y+V + F Sbjct: 151 YFAIITQAIAAIMTILIIGQQGYTGGINGITDLRTLKGWDIRPDHAKVVLYFVEVAFLFG 210 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + L++R + + +R+ + ++ K+ AF +++ F + GA F + Sbjct: 211 AILLALFVRHSKLGRILVAMREKEDRVRFSGYSVANFKIFAFCLAAMFAAVGGAMFTLNV 270 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG S+ T ++ Sbjct: 271 GFMSPSFVGIVPSIEMVIYTAVGGRLSIFGAIYGTLLVNFAKTSLSE------------- 317 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 SF + V+L+ + L Sbjct: 318 -SFPQLWLFGLGALFIAVVLIFPNGLAG 344 >gi|118477395|ref|YP_894546.1| branched chain amino acid ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|118416620|gb|ABK85039.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bacillus thuringiensis str. Al Hakam] Length = 342 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 132/334 (39%), Gaps = 31/334 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 24 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 83 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 84 VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 143 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 144 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 184 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 185 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 244 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 245 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 295 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R T ++ + +V+L+ L+ ++R Sbjct: 296 ERWTIILGLLYIIVLLVFPKGLVGTVKSLKNMKR 329 >gi|39934327|ref|NP_946603.1| putative high-affinity branched-chain amino acid transport system permease [Rhodopseudomonas palustris CGA009] gi|39648175|emb|CAE26695.1| putative high-affinity branched-chain amino acid transport system permease protein [Rhodopseudomonas palustris CGA009] Length = 383 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 94/328 (28%), Gaps = 36/328 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84 + ++ + L Y A GL + G G+LSL + + +G Y + Sbjct: 31 DVFRLNLVAKYLTYAFVAIGLVLCWGFGGILSLGQGVFFGLGGYCMAMYLKLEASSVENT 90 Query: 85 -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + ++ + A + + Sbjct: 91 KIQSTPGIPDFMDWNQITQIPWFWQPFHSLTITVIAILVVPAVFAFLIGAAMFKRRVGGV 150 Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193 +A + L + + ++ +Y+V + F Sbjct: 151 YFAIITQAIAAIMTILIIGQQGYTGGINGITDLRTLKGWDIRPDHAKVVLYFVEVAFLFG 210 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + L++R + + +R+ + ++ K+ AF +++ F + GA F + Sbjct: 211 AILLALFVRHSKLGRILVAMREKEDRVRFSGYSVANFKIFAFCLAAMFAAVGGAMFTLNV 270 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG S+ T ++ Sbjct: 271 GFMSPSFVGIVPSIEMVIYTAVGGRLSIFGAIYGTLLVNFAKTSLSE------------- 317 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 SF + V+L+ + L Sbjct: 318 -SFPQLWLFGLGALFIAVVLIFPNGLAG 344 >gi|319946503|ref|ZP_08020739.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] gi|319747334|gb|EFV99591.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] Length = 292 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 105/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + ++ ++ + + Sbjct: 8 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMVGAFMGYFLLNSLKVNFFVALLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 68 AMVGTAILGVVIEYLAYRPLRHSTRIAALITAIGVSFLLEYGMVFFVGANTRS------- 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I R+ + +L FL ++ +++T + A R + + Sbjct: 121 ----FPQVIETVRYNFGPISISNIQLMILGVSIFLMVALQFIIQKTKMGKAMRAVSVDSD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + I P M + I +LGG+ Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + + ++ L +++L+R Sbjct: 236 GIIPGAALGGFVIGLLETFATAIG-------------LSDFRDAIVYAILIVILLIRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|313126034|ref|YP_004036304.1| ABC branched-chain amino acid transporter, permease component [Halogeometricum borinquense DSM 11551] gi|312292399|gb|ADQ66859.1| ABC-type branched-chain amino acid transport system, permease component [Halogeometricum borinquense DSM 11551] Length = 456 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 62/397 (15%), Positives = 132/397 (33%), Gaps = 62/397 (15%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ-ILIYVMFAWGLSIVVGSLGLLSLNCV 71 +L + Y L+ + + Q ++ I ++ M A L++ G GL ++ V Sbjct: 21 AVLLVTYAAYVLVGVGLGYSLRGQLNTIAVLTFYIGVFAMLALALNLHWGYTGLFNIGIV 80 Query: 72 IAYAIGAYSYVILGSRYGLS------------IWLLIPVSAMISGACGMIMGLPSLKFRG 119 A+G Y + + + I + + G+++ LP+L+ R Sbjct: 81 GFMAVGVYVMALFSKPAYTPGGAAQVGGLGLPLIIGIIAGMVAAALLGLVVALPALRLRA 140 Query: 120 DYLAIATLIMSEIFQNILIK----------WKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 DYLAI T+ MSEI + + + G +G+ + + Sbjct: 141 DYLAIVTIAMSEIVRFSFLSGDLQQFQLLGNRVGFGGGSGLILDFTDPLQALFQSVGLWG 200 Query: 170 FRFPSS------------FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 V+ + +LL ++ + + IR+++ Sbjct: 201 AYLGFVDAFTVIVPTNPKPVVDGLVYGLILLLFVGAYFWLLKRTGESPFGRVLKAIREDE 260 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 SL K+ +F + A +G+AG F+ ++ ++P+ F+ V +I+GG Sbjct: 261 DVANSLGKDTNQFKIKSFMLGCALMGLAGIFWLMTQGAVTPNFFRPRVTFFVWIALIIGG 320 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN-------------------- 317 S + A+ V+ +++L + + Sbjct: 321 AGSNTGSVLGGAVFAAVLYQGPRYFKNLIDTVLPSTDAPSGFGQAVGPLISNIDPAPLFF 380 Query: 318 -------MRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 +M + L ++ R +L R + Sbjct: 381 YTVDSIRQLQLVIMGLVLIWLMHNRPEGMLGYRKETA 417 >gi|126665342|ref|ZP_01736324.1| ABC-type branched-chain amino acid transport system [Marinobacter sp. ELB17] gi|126629970|gb|EBA00586.1| ABC-type branched-chain amino acid transport system [Marinobacter sp. ELB17] Length = 318 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 111/326 (34%), Gaps = 26/326 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + ++ +S + ILI +F L +VG +GL++L + Y + Sbjct: 10 IFLATFFIIALCIPLFLESNSFFVGKATTILILAIFVMSLDFLVGRVGLVTLGHALFYGL 69 Query: 77 GAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 G Y +VIL Y ++ W+ +S +++G+ L+ G Y + TL +S++ Sbjct: 70 GGYLFVILTPEYEAVNFWIYAIYVMCVSAFVALVVGVVVLRTSGIYFIMITLAISQMVYY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 G F + YY+ L ++ Sbjct: 130 FFFDSLHFGGGDGLFIFIKPDTS----------IFGLSFLNLDNPTHFYYLALLGVLITL 179 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I + R+ R N +L I KL ++ + S AG FA Sbjct: 180 LTIKIVLRSRFGRIVEASRLNPARTEALGYNIFSFKLISYVIGSTLAAYAGLLFALQYGY 239 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P + + + + ILGGM ++ T G+ M+ + Sbjct: 240 VNPQFMTWEMSGTALVMSILGGMGTIYGAILGTITYEGLQYFFEHMSKDW---------- 289 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 M ++ L++L+ L Sbjct: 290 -----MLFMGGSIILMVLLLRKGLAG 310 >gi|157369665|ref|YP_001477654.1| inner-membrane translocator [Serratia proteamaculans 568] gi|157321429|gb|ABV40526.1| inner-membrane translocator [Serratia proteamaculans 568] Length = 526 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 83/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ + + + +++ + Sbjct: 253 ITYGLLGVINMAHGEMLMLGAYSAYLVQGLFQQFAPQWLALYPLVALPVAFGITACIGMA 312 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + V + + + + Sbjct: 313 LER--TVIRHLYGRPLETLLATWGISLVLIQCVRVLFGAQNVEVANPAWLSGGIQLLPNL 370 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+L + + L L +T + R + N+ + AF + Sbjct: 371 VLPWNRIAVILFVVLVLVLTWLLLNKTRLGMNVRAVTQNRAMAACCGVPTGRVDMLAFGL 430 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 431 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFGLGILNKI 488 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L++ + L I R L + Sbjct: 489 LEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFAFKGR 523 >gi|268325335|emb|CBH38923.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein [uncultured archaeon] Length = 317 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 132/310 (42%), Gaps = 17/310 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 VV +L FL ++Y+ ++ I +L++ M++ +++ + G SL + IG Y Sbjct: 14 VVTLILAFLLPLILGIKQYLLTVLILMLVFTMYSSAWNLLA-TSGQGSLGHAAFFGIGGY 72 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 I+ + +GL + L I + + G+++GL ++ + +LA+ T + I Q + ++ Sbjct: 73 VSAIISNSFGLPVILTIVIGGFFAAVIGVLIGLTCVRLKAWFLAMVTFGFAIIVQTVTVE 132 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 +T G GI P + + ++ YY++L + + II Sbjct: 133 LSGLTGGWDGIPA----------------KKLVPVTITNHVMYEYYIILLIAVVVIVIIY 176 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + ++ + A IR+N+ + + KL AFAVS+ F G+AGA ++P+ Sbjct: 177 LIMKSKMGLALEAIRENELEAKVMGINVTVYKLKAFAVSAFFTGIAGALEIHHFGYVTPE 236 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 ++ + I + GG+ ++ T ++ + E+ Y +L + Sbjct: 237 VYGIDISFWPIIYSVSGGLYTIGGPILGTVVITAIWEVLRSFGMTYGRFILIGLILILIV 296 Query: 320 HTTLMVIALF 329 + Sbjct: 297 IFLPKGLISI 306 >gi|108803213|ref|YP_643150.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941] gi|108764456|gb|ABG03338.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941] Length = 296 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 98/305 (32%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y + + GL+++ G L +L+ A+ Y+ +L + G +L + V Sbjct: 6 LVTGLLLGGVYSLVSMGLTLIFGVLDILNFAHGAFMALAMYASFVLVANAGFDPYLSLLV 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ L D L+++ ++ + V Sbjct: 66 SVPLLFVLGVLVQRVLLARVMDQPHENQLLLTFGLALLIENALLMVFTATPRTVEFPYAQ 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G + + ++ LG ++ + LRRT++ A R + +N Sbjct: 126 TGIPLGFATVRGPLDVFGAVADLPRVIAFLGSLVIAGGLFYLLRRTSLGTAIRAVAENPD 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + AF + +A + AG N+I +V+LGG+ Sbjct: 186 GAAMVGIDVRRMHMIAFGLGTACVAAAGTLVLPFLSL--QPTTGEQFNVIAFVVVVLGGL 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ ++ V EL F R Sbjct: 244 GNVVGALVGGILIGLVQELGGAFVPGVDKLFFVFVVFVLTLLL-------------RPQG 290 Query: 339 LLRLR 343 L + Sbjct: 291 LFGGK 295 >gi|238794092|ref|ZP_04637709.1| Branched-chain amino acid transport system, permease component [Yersinia intermedia ATCC 29909] gi|238726597|gb|EEQ18134.1| Branched-chain amino acid transport system, permease component [Yersinia intermedia ATCC 29909] Length = 519 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 35/288 (12%), Positives = 80/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ S + + + +++ + Sbjct: 246 ITYGLLGVINMAHGEMLMLGAYSAYVVQSLFQQLAPHWLALYPLVALPVAFFITAGIGMA 305 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + Sbjct: 306 LER--TVIRHLYGRPLETLLATWGISLMLIQSVRMIFGAQNLEVANPAWLSSGVQILPNL 363 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 364 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 423 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 424 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 481 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 482 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 516 >gi|187478387|ref|YP_786411.1| high-affinity branched-chain amino acid ABC transporter permease [Bordetella avium 197N] gi|115422973|emb|CAJ49503.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Bordetella avium 197N] Length = 308 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 102/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + IY + A G ++V G +G+++ Y IGAY ++ + Sbjct: 12 FFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTSSGIPLPF 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I ++ V+ +++G G + + + + LI + L W + G Sbjct: 72 IIAAMLVVAIVVTGVYGYTVERVAYRPVRGSPRLVALISAIGMSIFLQNWIALGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + + ++F V +++ L ++ L+++ + + A Sbjct: 129 ----RDMAVPSLISGALQFHMGSGFDVTVPYSRVMIIVVTVILMIALTLFIKYSRLGRAS 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + L F + + + G A + +++ F I Sbjct: 185 RACSQDMHMAKLLGIDTNRVISFTFVMGAGLAAVGGILIAITIGKLN-PFIGFLAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|91788944|ref|YP_549896.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91698169|gb|ABE44998.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family [Polaromonas sp. JS666] Length = 623 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 121/323 (37%), Gaps = 34/323 (10%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + +L+ L A + Y ++ LI ++F L ++ GL+S +A+G Y Sbjct: 319 AIAAVLVLLSGLAWQGGAYWQTLAADALILLIFGISLQSMMALGGLVSFGHAAFFALGGY 378 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + S +G S+ + + + + + G ++ G YLA+ +L ++++ + Sbjct: 379 GAALSHSLWGASLPVALAAGCVTALVVAAVFGAAVVRSAGVYLAMLSLALAQVIWAGATQ 438 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T G G + +L+ + + Sbjct: 439 WVSLTGGDNG-------------------LIGLALVEEEGRPLFFALLVVLALACVLALR 479 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ + A + +RD + + + K F S+ G+AG FAA + + P Sbjct: 480 LLSRSVMGAALQAVRDAPARAAASGLPVGWLKYRVFLESAVLAGLAGGLFAAHKGAVFPS 539 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + ++ + +V+LGG+ L +A+L V Y+ Sbjct: 540 IAAVATSVDALLVVLLGGVHQLWGAVVGSAVLSYVSAELGREVTYWRG------------ 587 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 L+ + + LV++ LL L Sbjct: 588 ---LLGLFIMLVMVASPSGLLGL 607 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 85/304 (27%), Gaps = 19/304 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + A GL+++ G +++ + +GA + + + W Sbjct: 8 LLGGLSYATTLFLMAAGLTLIFGVTRIVNFAHGSFFMLGALFTAHWVTEWFPA-WGESAP 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++ G L E++Q + + A + Sbjct: 67 LYLLAILFGAACAGLVGALADFLLLRRMSGAPELYQLVATFGLTLALHDAMQWGFGPDEV 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + ++ ++ + + L LR + R ++ Sbjct: 127 FAPRFPGLK--GSVQMGDEFFPVYQLVMIALGPLVWLGLHLLLRHSLFGRRLRAATQDRS 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L L A + A G+ GA + + +V+ GG+ Sbjct: 185 MLAALGVNPKPLMLGAVVLGCALAGLGGALQLPREPA--HLQMDMNVIVETFVVVVTGGL 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A ++ V L + ++ + + V+++R Sbjct: 243 GSIGGAFVAALLIGLVHALGIAV--------------LPQATLVIVFLTMAAVLVLRPQG 288 Query: 339 LLRL 342 L L Sbjct: 289 LNGL 292 >gi|317404152|gb|EFV84598.1| urea ABC transporter [Achromobacter xylosoxidans C54] Length = 313 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 65/322 (20%), Positives = 134/322 (41%), Gaps = 25/322 (7%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L++ + + ++ + + ++ + +IV G G LSL + Y IG Y+ Sbjct: 14 LILLIVMFIVPIATGTPFWTNLFVLLFVFSALSVAWNIVGGYAGQLSLGHAVFYGIGGYT 73 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +L +G+S W + V A IS +I+ P+L+ RG + A+AT+ + E+ + ++I Sbjct: 74 ATLLTQNFGISPWFGMLVGAAISAVVAIIISYPTLRLRGPFFALATIAILEVVRLLVIHE 133 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + T G +GI + + + R +I + G+ L + + Sbjct: 134 ESWTGGSSGISLPLNIGWAWIVFRE--------------KINYVIIAFGLFLLVTWVSWY 179 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +R++ I + IR+ + A ++ + K+ A VS+ + G F + P Sbjct: 180 IRKSRIGHYLIAIREREDAALAVGIHTVRVKIIAAVVSAMLTSIIGTFHITYLTFVDPSS 239 Query: 261 -FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F +I V ++GG+ +++ T +++ + EL G N + Sbjct: 240 AFSLELSIQVAMFALIGGLGTVAGPIAGTFLVLPIAELARGWLSSVGNGM---------- 289 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 H + + L V+L L Sbjct: 290 HGLIYGLILVAVVLTIPRGLAG 311 >gi|167571778|ref|ZP_02364652.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia oklahomensis C6786] Length = 324 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 120/302 (39%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + Sbjct: 26 FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTTPELGVLAGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 86 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + + I+ + + I++N+ Sbjct: 132 GLQGVPRGRLFGLVDLSSDLALYYVVLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAT 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AGA + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + S T + + +L ++ Sbjct: 252 FGPLVGAALIVALEDRLGDIGGWLASATGIDWFRSLGESATIVTGLIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|148254035|ref|YP_001238620.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146406208|gb|ABQ34714.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 330 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 114/332 (34%), Gaps = 29/332 (8%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 L + V L + ++ + ++ + + ++A L+++ G GLLS Sbjct: 15 RTSALVTIGVGALALAAILAAPWLAKPFTITLLTEAFVLAIWAMSLNLLSGHAGLLSFGH 74 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + +G Y+ + L + + + + G +++ G +I +L ++ Sbjct: 75 AAGFGLGGYAAGYFAREVSADVILSLLFAEAVVFIVAALAGAVAIRLSGVAFSIVSLCIA 134 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 ++ + I W+ +T G G+ R + + Y ++ + Sbjct: 135 QVLYQVAIAWRAVTEGMDGLLGVPLP--------------RLFGATIKNGAPFYILVSVV 180 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + + + ++ R IR N S+ + K AF +S G+AG Sbjct: 181 MMATLAGLALVLKSPFGATLRAIRTNDIRAASIGIDVRLHKWLAFVISWMLAGLAGGLMV 240 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + +P +SE+ V+ + I GG+ ++ + + ++ Sbjct: 241 FLKAGTTPMSLHWSESGNVLIMTIFGGLGTIVGPVLGAVCFVFLHDVLTSTL-------- 292 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + +V++ L L Sbjct: 293 -------AIWQFVFGLIFVVVVIAFPSGLAGL 317 >gi|134291188|ref|YP_001114957.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134134377|gb|ABO58702.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia vietnamiensis G4] Length = 357 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 100/295 (33%), Gaps = 12/295 (4%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 + Y+ S LI + A ++ G G+L+L + +GAY + + ++ Sbjct: 37 LILPFCLGPYLLSTVRDALIMGLLALSYDLLWGRAGVLTLGHTTFFGLGAYGFAVATVQF 96 Query: 89 GLSIWLLIPVSAM--ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 G + + V ++ A + L R + AI ++ + + Q + W+ +T G Sbjct: 97 GQTPVIGFIVGLFGAMAVAVVLGYFLLFAGVRLHFFAIISMAVLIVVQQLATSWQSVTGG 156 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G+ L F + +Y++ + + + R+ Sbjct: 157 DTGLLGIPGLSFSLIGHT----------VDLSGASGAWYMVAAVLAMLLLTTWLVCRSRY 206 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 I N+ + L F S+ +AG AA ++PD+F Sbjct: 207 GKVLSAIATNEWRAKACGYHTSAHLLLVFTASAGLAAVAGVLMAACSGVVAPDVFSPVLA 266 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 VI V +GG +L A L + + ++ + LL + Sbjct: 267 TEVILWVAIGGRGTLGGPVLAAVALTLLKQAVSSVSTDGWPLLLGGVFLGCVLFL 321 >gi|294010932|ref|YP_003544392.1| branched-chain amino acid transport system permease protein [Sphingobium japonicum UT26S] gi|292674262|dbj|BAI95780.1| branched-chain amino acid transport system permease protein [Sphingobium japonicum UT26S] Length = 370 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 97/341 (28%), Gaps = 34/341 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A L+ Y ++ + L + A GL ++ G G+LSL + + +G Sbjct: 10 AATGVALILAIAAPWLLSAYDLNLLARFLALSLTAMGLVLIWGEGGILSLGQGVFFGLGG 69 Query: 79 YSYVI-----------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 Y+ + L W + S + A +++ Sbjct: 70 YALAMHLKLAGLAEGELPDFMIWSGTEALPWWWSLVKSPFAAVAAVLVVPTALGALMAWA 129 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + LI + L + F F + + Sbjct: 130 IFRRRIG---GVYFALITQALALAFATLLVSQQGLTGGFNGLTDYQTLFGFNLNLPSTTL 186 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +Y++ L + + WL + R RD L K+ AFAV++ Sbjct: 187 ALYFITLALVVAGLLGLRWLLASRYGKLLRASRDGANRMRFLGYDPTPYKVIAFAVAALL 246 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 GM+GA F +SP + +I ++ +GG SL ++ + Sbjct: 247 TGMSGALFTLHAGVVSPALVGVVPSIEMVIWAAIGGRNSLIGAIAGALLVNFAKDKISTA 306 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + L L Sbjct: 307 MPEVWLYG--------------LGALFIAAVTILPQGLAGL 333 >gi|295705057|ref|YP_003598132.1| putative branched-chain amino acid ABC transporter permease [Bacillus megaterium DSM 319] gi|294802716|gb|ADF39782.1| putative branched-chain amino acid ABC transporter, permease protein [Bacillus megaterium DSM 319] Length = 328 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 103/315 (32%), Gaps = 18/315 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----------SYVILGSR 87 + +Y + A G ++V G L L++ + GA+ I+ Sbjct: 13 LIDGLTLGAVYAIIALGYTMVYGILELINFAHGEIFMSGAFIGTAILIGLTGVGWIVAFP 72 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 +++ L++ ++++ +G GM + + + + TLI + +L + Sbjct: 73 AVVTLILVLLITSVATGFLGMGIERVAYRPLRKSSKLITLITAIGMSFLLQDFVRFITEL 132 Query: 148 -AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G Y+ + + +++ VL+ L + +++ RT Sbjct: 133 KNGNYIVNTPALFSGKISVSASSLSSSFDDATFKVTFIVVLIVALCLMIGLEIFVNRTKW 192 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A R + + ++ + F + SA G G FA I P F Sbjct: 193 GMAMRAVAQDPDTASLMSINVNKVISLTFFIGSALGGATGVLFALHYGTIDPY-IGFILG 251 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + + +LGG+ ++ +L + ++L Sbjct: 252 LKAFTAAVLGGIGNIRGAMFGGLMLGILEMFAAANLSTITGNILG-----AEYKDVFAFA 306 Query: 327 ALFLVILMRSHSLLR 341 L LV++ + L Sbjct: 307 ILILVLIFKPEGLFG 321 >gi|228920664|ref|ZP_04084007.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838965|gb|EEM84263.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 317 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 127/322 (39%), Gaps = 31/322 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + + I + +IS I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F YYV L + ++ Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + + Y+ S L + R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T ++ + +V+L+ L+ Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295 >gi|283782295|ref|YP_003373050.1| inner-membrane translocator [Pirellula staleyi DSM 6068] gi|283440748|gb|ADB19190.1| inner-membrane translocator [Pirellula staleyi DSM 6068] Length = 326 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 108/325 (33%), Gaps = 33/325 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS---------- 80 + + + + A G ++V G +GL++ + +G++ Sbjct: 14 PFGTFLQQVLIGLTNGSLIALIALGYTMVYGIIGLINFAHGDLFMLGSFFALTVISLILG 73 Query: 81 ----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + L+I++ + + + + + + K + +A L+ + I Sbjct: 74 VAGGESSSAAFIFLAIFVSLVLVPLFCASLNVTVDYIIYKPLRNAPKLAPLVSAIGVSFI 133 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + G + ++ + L + LI + + V+L + Sbjct: 134 FMNAGLLWRGASPVHFPNILPGGNYNLFELINYESIRFTVKDLT-----VILITVPVMVG 188 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L+++ T + A R +Q A + + F + A G+A + + + + Sbjct: 189 LTLFVKYTKLGTAMRATEQSQLAARLMGINVDRVIAVTFGIGGALAGVASVIYGLTINTV 248 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 S M F I + +LGG+ SL I+ V L + + L F Sbjct: 249 SFQM-GFQNGIYAFTAAVLGGIGSLPGAMLGGLIIGLVRSLGSEYIGENWTNALIFS--- 304 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 L +++ R LL Sbjct: 305 ----------ILIAILVFRPSGLLG 319 >gi|270262691|ref|ZP_06190962.1| transporter [Serratia odorifera 4Rx13] gi|270043375|gb|EFA16468.1| transporter [Serratia odorifera 4Rx13] Length = 304 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 89/304 (29%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLALLSFFGLHSFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVITGVYGWVIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQISQGPRQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + F + ++L+ A + ++ T + R + ++K Sbjct: 129 GIPTLLDGVFRIGFDGGVIQITYTKVFILVASLLGMAILTYVIQHTRLGRICRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A G+AG + + F I + +LGG+ Sbjct: 189 MASILGINTDRVISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L GM + + F L ++++ R Sbjct: 248 GSLPGAMLGGLLLGVAEAQFAGMVNSDYKDVFSFG-------------LLVVILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|237654578|ref|YP_002890892.1| urea ABC transporter permease UrtB [Thauera sp. MZ1T] gi|237625825|gb|ACR02515.1| urea ABC transporter, permease protein UrtB [Thauera sp. MZ1T] Length = 543 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 86/290 (29%), Gaps = 17/290 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ +GAY+ ++ + + + + + Sbjct: 269 ITYGVMGVINMAHGELLMVGAYATFLVQGVFRAHFPEYLDFYVLAAIPAAFLAAALVGIA 328 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + +++L W V L S + + V Sbjct: 329 MER--LVLRHLYGRPLESLLATWGLSLVLIQAARVLFGPQNLELANPSWMSGGVELAGGV 386 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + +L F+ I L +++T + R + N+ + AFA+ Sbjct: 387 VLPYNRIVILGFAAFVLVLIWLMMQKTRLGMFVRAVTQNRPMAGCVGVPTARVDTLAFAI 446 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ + +V+LGG+ L+ A L V + Sbjct: 447 GSGVAGLGG--LALSQIANVGPAMGTGYIVDAFMVVVLGGVGQLAGAVWAALGLGIVAKF 504 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 G L+++ + I R + L+ Sbjct: 505 LEGWAGAVVAK-------------ILVLVFIIAFIQKRPQGIFALKGRFA 541 >gi|311103796|ref|YP_003976649.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310758485|gb|ADP13934.1| inner-membrane translocator 11 [Achromobacter xylosoxidans A8] Length = 321 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 64/330 (19%), Positives = 135/330 (40%), Gaps = 30/330 (9%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 I+ + ++ L +F + + S ++LIY + A L++++G G+++L Sbjct: 3 SIIWTVVLLAALAVFPLVAPALGLDFYISFVRRVLIYALAATSLNLILGYGGMVALGHAA 62 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 + GAY+ IL S ++ P + +++ I G SL+ RG Y + TL +++ Sbjct: 63 FFGAGAYAVGILAMSGVTSALIVWPAAMLLAAVLACITGAISLRTRGVYFIMITLAFAQM 122 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 I I + +L + P + +++ YY++L + Sbjct: 123 LFYIFISLRQYGG---------------EDGLNLPGYSTLPGIDLAHDVSFYYLVLALFA 167 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + + + A + IR+N+ S+ + KL AF +S A G+AGA A Sbjct: 168 LIMWVFSRVVASRFGTALQGIRENESRMESMGYPVYRIKLMAFTLSGAVAGLAGALLANH 227 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 ISP + ++++ ++ +V++GG+ +++ + E+ Y+ Sbjct: 228 NLFISPSLMHWTQSANLLIMVLVGGIGLRYGGVAGAVVMLTLEEVLRLWTEYWH------ 281 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L V+ L+ L Sbjct: 282 ---------LPLGVLLLCVVFGAPRGLVGL 302 >gi|302188759|ref|ZP_07265432.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642] Length = 529 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|221635489|ref|YP_002523365.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM 5159] gi|221157819|gb|ACM06937.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM 5159] Length = 326 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 116/326 (35%), Gaps = 29/326 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + +L L A S ++ + I+ + A L ++ G G++SL + + Sbjct: 5 AVVAALIVLALLSFPAWGSPYFVGRIFTPAFIFGVIALSLCLLAGYGGMVSLAQMTLAGL 64 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 Y Y L G W+ I +++ + GL +++ G Y + TL + + + Sbjct: 65 AGYGYGHLTVMQGQPWWVGILGGIVLATVVAFLFGLIAVRSSGIYFLMITLALGMVVYAL 124 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + G GI G + + YY+ L + + + Sbjct: 125 ANQNRSFFGGHTGILGIRPPELFGHALTER--------------VPFYYLCLVVGLATYA 170 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ +L RT A +RDN + +L + +++AF ++ G+ G I Sbjct: 171 LVRYLARTPFGLALVALRDNPRRLAALGFHVALHRVAAFTLAGFLAGVGGLLLVWYNGAI 230 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP + I ++ I ++GG+ + + V F SF Sbjct: 231 SPTTIDLTRLINIMVIAVIGGLMYAEGAFLGALVFVLVTN---------------FASSF 275 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 R T++ + +L L L Sbjct: 276 TQRFNTVIGLVFLATVLFSPEGLSGL 301 >gi|92114432|ref|YP_574360.1| inner-membrane translocator [Chromohalobacter salexigens DSM 3043] gi|91797522|gb|ABE59661.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Chromohalobacter salexigens DSM 3043] Length = 350 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 101/329 (30%), Gaps = 15/329 (4%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + V L A + S+ + L Y++ A + ++ G LG+LSL Sbjct: 25 LIVGMLAVVVLHALPPDHAWHLNGSVVSLLGKYLTYMLLALAVDLIWGYLGILSLGHGAF 84 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +A+G Y+ + + + + + L + +A Sbjct: 85 FALGGYAMGLYLTA-QQAPLAPWQAVMAHFPVAALAVILAPGLLALVFGWLAFRSRVTGV 143 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 +I + T + F + + ++ L Sbjct: 144 YFSIITQALTFALMLAFNRNEMAMGGSTGLTRFDELLGFALAGEGMTVALFVASGVAVLL 203 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + R+ + RD + + + KL+ F +S+ G+AGA + Sbjct: 204 AFWGCKAVTRSRLGRVCMATRDAEARVRFIGYRVEHVKLAVFVLSAMIAGVAGALYVPQV 263 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I+P F +I V+ V LGG +L ++ + + G+ Sbjct: 264 GIINPSTFAPLFSIEVVVWVALGGRATLYGALLGALVVNYLKTVLTGV------------ 311 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L+ +V + + L Sbjct: 312 --MPDAWLFLLGGLFVVVTMFLPQGVAGL 338 >gi|163849166|ref|YP_001637210.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl] gi|222527143|ref|YP_002571614.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl] gi|163670455|gb|ABY36821.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl] gi|222451022|gb|ACM55288.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl] Length = 347 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 66/331 (19%), Positives = 117/331 (35%), Gaps = 31/331 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + LL + K+ M IQ+ I +FA I++G G+LS + + Sbjct: 19 LIAFPYLIALLTGQPIDSGIPKFWQGMLIQVFILAVFAMSYDILMGYTGILSFGHALFFG 78 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ IL G + +I+ +I+GL SL+ G Y A+ TL +++F Sbjct: 79 TGAYTIGILLKHAGWDLGSAFVAVIVIAVLQSLIVGLLSLRVSGVYFAMVTLAFAQMFFL 138 Query: 136 IL--IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + ++ T + G+ + S + YY+ LG + Sbjct: 139 LAEATDFRQWTGAEDGLQSIPVPAW---------------ISPTNERLRFYYLALGFAVV 183 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + + IRDN+ L + KL A +S +AGAF A Sbjct: 184 MYLLARQVVNSPTGRVMMAIRDNEVRARVLGYHTLTYKLIAITISGVMAALAGAFNALWN 243 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +P + I + + I+GG+ SL A++ + Sbjct: 244 LNANPAVLSVGTTINALLMTIIGGVGSLIGPMLGAAVIQLLGYWLNFF------------ 291 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 F L I L++L + ++ Sbjct: 292 --FGPAWPLLFGIVYILIVLFLPYGIVGTWR 320 >gi|126696222|ref|YP_001091108.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus str. MIT 9301] gi|126543265|gb|ABO17507.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus str. MIT 9301] Length = 376 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 99/343 (28%), Gaps = 31/343 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L+ LL + T + ++ + L + A G+ ++ G GLLSL I +A Sbjct: 12 IVLSFWIILLALIIAAPTLLPVFRLNLLGRYLSLSIVALGVDLIWGYTGLLSLGQGIFFA 71 Query: 76 IGAYSYVIL-----------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 +G Y + + I +P+L Sbjct: 72 LGGYCAAMFLQITSSSEFPNNIPEFFALYGVEKLPFFWEPFKSPIFTFFAIWIIPALVAG 131 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 + + ++ +IL + + + + + F Sbjct: 132 LIGFLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSES 191 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + +++ + + W+ R N IRD++ + K F+++ Sbjct: 192 MQRIFFWITAILVIAAWFFAKWVVRGRFGNILIGIRDDEPRVRFTGYNPVIFKTIVFSIA 251 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 G++GA + +SP +I ++ V +GG +L + L Sbjct: 252 GGLAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLGAILGAVFINYAKSLV 311 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+ +L Sbjct: 312 SE--------------ALPASWMFIQGGLFILVVTALPEGVLG 340 >gi|124268773|ref|YP_001022777.1| branched-chain amino acid ABC transporter permease [Methylibium petroleiphilum PM1] gi|124261548|gb|ABM96542.1| branched-chain amino acid ABC transporter, permease protein [Methylibium petroleiphilum PM1] Length = 404 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 99/341 (29%), Gaps = 48/341 (14%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84 + ++ + L Y A GL +V G G+LSL + + +G Y+ + Sbjct: 32 DIFRLNLVGKYLTYAFVAVGLVMVWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPETT 91 Query: 85 ---------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 +WL + + L + + Sbjct: 92 KIQTTPGIPDFMDWNQITELPMMWLPFKSLPLSLILVIAVPTLLAWIISFAMFKRRVGGV 151 Query: 130 SEIF--QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 Q + + + G+ G + L + + + +YY+ Sbjct: 152 YFAIITQAVALILTVLIIGQQGY------TGGVNGMTDLKTVLGWDTRTDSAKYILYYLC 205 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + S + W++ + + +RD + + K+ F +++A G+ GA Sbjct: 206 VALLVASILLCRWIQTSKLGTLLLAMRDKEDRVRFSGYDVSNFKIFTFCLAAALSGIGGA 265 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F+ +SP +I ++ +GG SL T ++ Sbjct: 266 LFSLQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLVGAVYGTLLVNAGKTF---------- 315 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 F SF LM V L L L Sbjct: 316 ----FSESFPDLWLFLMAALFIGVTLAFPMGLAGLWESHVK 352 >gi|238749865|ref|ZP_04611369.1| Branched-chain amino acid transport system, permease component [Yersinia rohdei ATCC 43380] gi|238711794|gb|EEQ04008.1| Branched-chain amino acid transport system, permease component [Yersinia rohdei ATCC 43380] Length = 514 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 80/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ + + + +I+ + Sbjct: 241 ITYGLLGVINMAHGEMLMLGAYSAYLVQTLLQHVAPHWLALYPLIALPVAFFITAGIGMI 300 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + Sbjct: 301 LER--TVIRYLYGRPLETLLATWGISLMLIQSVRMIFGAQNLEVANPAWLSGGIQILPNL 358 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 359 VLPWNRIAVIAFVVIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 418 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L + ++ Sbjct: 419 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 476 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 477 LEPQMGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 511 >gi|284990185|ref|YP_003408739.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160] gi|284063430|gb|ADB74368.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160] Length = 291 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 109/308 (35%), Gaps = 26/308 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY +FA G ++V G L L+L +A A+ + L R GLS+W +PV Sbjct: 4 LLNGIFIGSIYALFAIGFTLVFGILDRLNLAHPAVFAASAFVGIELVERGGLSLWAALPV 63 Query: 99 SAMISGACGMIMGLPSLKFRGDY--LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + G+++ + + A LI S +LI G Sbjct: 64 VFVFGAVLGLVIERLAFRPLKGRADAHFAGLISSIALAGMLIALLQWRYGPDTRRFPP-- 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 RF + + +L L + + RT + R + +N Sbjct: 122 --------GSFPETRFDVAGAQVTLAQVVILAVSLALMVGLTYMVTRTRLGRGMRAVAEN 173 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 A L + FA+SSA +AG FA + + M + + ++++I+G Sbjct: 174 PTAARVLGVDVDRITAVTFAISSALGAVAGVLFAINVNTAQLGM-GSAIELKGLAVIIVG 232 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL +L + ++ F LFL++L+R Sbjct: 233 GMGSLPGALIGGLVLGLAEVFAVQYIGSSWRDVIAFG-------------LLFLILLVRP 279 Query: 337 HSLLRLRT 344 LL R Sbjct: 280 QGLLGARK 287 >gi|121611723|ref|YP_999530.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121556363|gb|ABM60512.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 337 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 111/290 (38%), Gaps = 11/290 (3%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYG 89 + M +++I +FA L ++ G GL+SL + + Y+ S Sbjct: 29 FPLVGSDFYLQMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAFFGVAGYALAWFTPSDMP 88 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 +S+W +P++ +G +++G ++ RG Y + T+ +++ + + + Sbjct: 89 VSLWWSLPLAIAAAGLLALLIGCFVVRTRGIYFIMVTMAFAQMLFYLFFDNRLLGGSDG- 147 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 L R + + YY L + ++ L + A Sbjct: 148 ---------LFIQFRPDASILGWLPFDLEVRTTFYYFTLTLQVAVYVLLRRLLWSPFGRA 198 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 IR N + +L +L+AF ++ A G+AG A ++P+M F + Sbjct: 199 LAGIRINGQRMRALGFGTHGYQLAAFTLAGALAGLAGYLLGAQTGHVTPEMMGFHMSAHA 258 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + ++ILGGM + + ++ L ++ ++ SL+ + Sbjct: 259 LMMLILGGMGNFAGAMIGAFAFEYLLHLFQDLSNKHWQSLMGGFIVLVVL 308 >gi|317486437|ref|ZP_07945264.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] gi|316922347|gb|EFV43606.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] Length = 302 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 94/299 (31%), Gaps = 17/299 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY + A G ++V G + L++ Y IGA++ +I+ S G+ + + + Sbjct: 14 LTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTALIVASALGIMGFPAAGIIVIA 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + + LI ++ + Sbjct: 74 ALAAVIWCAAYGYTIEKIAYRPLRGA---PRLSPLISAIGVSIFLQNYVSLAQTSDFVAF 130 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + F I + +++ ++ L+++ T + A R N+K Sbjct: 131 PQLITDFEFLDPISHIIGTSDFLIIVTSLVTMVALTLFIQYTKMGKAMRATAQNRKMAML 190 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L F + S+ + G A +++ F I + +LGG+ S+ Sbjct: 191 LGIDADRIISLTFIIGSSLAAIGGVLIANHVGQVNFF-IGFIAGIKAFTAAVLGGIGSIP 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +L G + L F L L+++ R +L Sbjct: 250 GAMVGGLVLGLCESFATGYISSAYEDALAF-------------ALLVLILIFRPAGILG 295 >gi|170736642|ref|YP_001777902.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|169818830|gb|ACA93412.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 331 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 101/292 (34%), Gaps = 12/292 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + +++ + Y ++ L+ + A ++ G G+L+L + IGAY + Sbjct: 4 FAIVVVGAILPLVVGAYQLTVIRDALVLAILALSYDLLWGRAGVLTLGHTTFFGIGAYGF 63 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMI--MGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + ++G + + + L R + AI ++ + I Q + Sbjct: 64 AVTTVQFGQTPLFGFLAGLACAAVAAAVLGYFLLYAGVRLHFFAILSMAVLIIAQQLATS 123 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W+ +T G G+ L F + + +Y + + ++ Sbjct: 124 WQSVTGGDTGLLGIPGLSFQLAGHT----------LDLSSPVASWYAVAIILVGLLGVVW 173 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L R+ I N+ + + L F S+ +AG AA+ ++PD Sbjct: 174 LLCRSRYGKVLAAISTNEWRALACGYHTSWHLLLMFMASAVLAAVAGCLMAATAGVVAPD 233 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 +F VI V +GG S A L + ++ ++ +L Sbjct: 234 VFSPVLATEVILWVAIGGRGSSGGPVLAAVGLTLLKHGASSLSTQWWPLILG 285 >gi|331012527|gb|EGH92583.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 542 Score = 82.2 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 269 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 328 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 329 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 386 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 387 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 446 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 447 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 504 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 505 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 539 >gi|293397104|ref|ZP_06641378.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291420575|gb|EFE93830.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 485 Score = 82.2 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ ++ + + + +++ + Sbjct: 212 ITYGLLGVINMAHGEMLMLGAYAAYLVQGLFQQFAPQWLALYPLVALPVAFAVTAAIGMA 271 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + + + + + Sbjct: 272 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNVEVANPAWLSGGIALLPNL 329 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V++ + + L L +T + R + N+ + AF + Sbjct: 330 VLPWNRIAVMVFVALVLVFTWLLLNKTRLGMNVRAVTQNRAMAACCGVPTGRVDMLAFGL 389 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L V ++ Sbjct: 390 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAALGLGIVNKI 447 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L++ + L I R L + Sbjct: 448 LEPQLGAVLGK-------------ILILALIVLFIQKRPQGLFAFKGR 482 >gi|114764861|ref|ZP_01444043.1| ABC transporter permease protein [Pelagibaca bermudensis HTCC2601] gi|114542747|gb|EAU45770.1| ABC transporter permease protein [Roseovarius sp. HTCC2601] Length = 326 Score = 82.2 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 104/281 (37%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 ++ + + ++ + +I+ + A GL+I +G GL+SL + + IG Y+ IL Sbjct: 16 IVIPGWALYADEPFTITLATRAVIFALAAVGLNIALGLGGLVSLGHAVFFGIGGYAMGIL 75 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 S L+ + ++ L ++ + L+ I Sbjct: 76 ASHAQSYTPLIEWPFVIEGTKSMPVIWLVAIVASSAAALLIGLLSLRTSGVYFIMITLAF 135 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 + + G S+ FP + I Y + L + L + L R+ Sbjct: 136 GQMMYFFAISWPAYGGEDGLSIYVRNGFPGLNTLVPIQFYGLCLALLCLVLAFNARLMRS 195 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A R + ++ +L A +S A G+AGA FA +SP M + Sbjct: 196 PFGLALDAARQVPERVRAVGLDPRRLQLVALVISGAITGLAGALFADLNRFVSPTMLSWQ 255 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 + ++ VI+GG+ L I + + L G++ Y+ Sbjct: 256 MSGEIMVFVIIGGVARLFGPVAGAGIYVLLEHLLGGVSEYW 296 >gi|288917288|ref|ZP_06411656.1| ABC transporter related protein [Frankia sp. EUN1f] gi|288351310|gb|EFC85519.1| ABC transporter related protein [Frankia sp. EUN1f] Length = 967 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 12/243 (4%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + +I + L +V G G LSL G Y L + +GL Sbjct: 316 LSTPDNWTDAFTTTIIGAIVCVSLVVVTGYGGQLSLAQFAFAGWGGYVASRLAAEHGLPF 375 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 L++ + + + G+++GLP+L+ RG +LAIAT ++ Q +L + P+T G G V Sbjct: 376 LLVLVIGVVAAVPLGVLVGLPALRTRGIHLAIATFGLAYSLQAVLFQSVPLTGGLEGTVV 435 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 F + V + V L L+A + +RR Sbjct: 436 EP------------ASLFGWDVDPVSHPKRYAIVCLTALLLAAVVAGNIRRGRAGRRLVA 483 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 +R N++A SL ++ AKL +FA+S+A G+ G A + + F +I V+ Sbjct: 484 VRGNERAAASLGISVYGAKLVSFALSAAIAGLGGVLLAFQSSYVDFNQFNVFNSIAVVIN 543 Query: 273 VIL 275 ++ Sbjct: 544 TVI 546 Score = 67.2 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 81/272 (29%), Gaps = 12/272 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ IY + GL +V G+++ A+GA ++ L G+ + Sbjct: 3 RFALLGLGLGAIYALAGQGLLLVYRGSGVVNFAQGAFAAVGALAFYQLHMEAGVPTAPAV 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ ISGA G +M L ++ D + +I + +L + I G V L Sbjct: 63 VLALAISGAVGALMHLAVMRPLRDAPPLTRVIATLGVMVVLQQAGRIIFGTEVHIVPSFL 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 P +L +SA + L R + + +N Sbjct: 123 PTDSVH----------PFGGPAVGADRLVLLAIAVVISAVLWLVYRYSRFGAVTAAVAEN 172 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++A + + + + + G AG I ++ ++ Sbjct: 173 ERAAQLTGHSPDVVAVINWTLGAMLAGAAGILIVPITGL--DINTLILLIIPALATCVVA 230 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 S A+ ++ Sbjct: 231 VFASFPIAFAASMVIGITQSEITNYVSAAGWG 262 >gi|242280407|ref|YP_002992536.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638] gi|242123301|gb|ACS80997.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638] Length = 358 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 132/358 (36%), Gaps = 38/358 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + ++ YI S+ + I I ++ + L++V G +G S I Sbjct: 8 IGIWAMAAIVVALSQFGALDLYIQSVIMFIGINIILSSSLNVVNGYMGEFSCGHAGFMCI 67 Query: 77 GAYSYVILGSRYGLS-----------------IWLLIPVSAMISGACGMIMGLPSLKFRG 119 GAY +L + +++ +S ++S G+I+ +PS K RG Sbjct: 68 GAYVSSVLSVMFFAQDKIFGAPILPPELAPLGFPIVVIISGLVSAVAGLIVAVPSFKTRG 127 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 DYLAI T+ + + + + I G G R+ V + Sbjct: 128 DYLAIITIAANYMVISAIENM-DIIGGPRGFMGMKRVVNAMEDVIDIPWMM--------- 177 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 ++ F+S +I + +I ++ A ++ K++AF +SS Sbjct: 178 -----IWVILGTFMSIWMIRRFVSSTYGKGIMSICQDEVAAEIMSVDTNKMKMAAFMLSS 232 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 G+AGA FA ++P F ++ + +V LGGM SL + ++EL Sbjct: 233 GLAGVAGALFAHVLGYVNPQSFNIMKSTECLVMVYLGGMGSLGGSILSAIFFTVMLELLR 292 Query: 300 GMNFYYFNSLLKFDCSFNMRHT------TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + + + H L+ + L L++ R ++ + + R Sbjct: 293 FIIPALDTGMHFLNLLPDTYHLSQVWKWVLIPLTLILLMQFRPEGIMGNKELPDLFPR 350 >gi|121608835|ref|YP_996642.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121553475|gb|ABM57624.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 308 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 94/293 (32%), Gaps = 8/293 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI----LGSRYGLSIWL 94 + + IY + A G ++V G +G+++ Y IGAY ++ +G++ G + L Sbjct: 12 LVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTQGGYPLPL 71 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 ++ + +S G + L ++ I + + I Sbjct: 72 VLGAALFVSVLVTGTYGFVVERVAYRPLRGGPRLVPLISAIGMSIFLQNY---MQIGQGA 128 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 R + V + F V ++ L ++ L++ + + A R Sbjct: 129 RDVSVPLLVSGALEFDMGGDFTVTVPYGRLLIVGVTLALMIALTLFIAHSRMGRACRACA 188 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++ + L F + + + G S +++ F I + + Sbjct: 189 EDMQMANLLGIDTNKVISFTFVLGAMLAAVGGVLIGLSIGKLN-PFIGFIAGIKAFTAAV 247 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 LGG+ S+ +L G + ++ F + + Sbjct: 248 LGGIGSIPGAMLGGVLLGLAETFASGYMPGEYKDVVAFGLLILVLLLRPTGLL 300 >gi|291615146|ref|YP_003525303.1| inner-membrane translocator [Sideroxydans lithotrophicus ES-1] gi|291585258|gb|ADE12916.1| inner-membrane translocator [Sideroxydans lithotrophicus ES-1] Length = 320 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 92/305 (30%), Gaps = 10/305 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Q +Y + A G ++V G LGL++ IGA ++ S+ Sbjct: 21 IINGLVQGSVYALVALGYTMVYGILGLINFAHGEVVMIGA----MIALTVLQSLLATAVA 76 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + +A + + + + Sbjct: 77 PVLAVLVSLLAAMAVCMALGYTIERVAYRPLRNAPRLAPLITAIGVSIVLQNLAMMIWGR 136 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + I +++ + A ++ + +T + A R + +N Sbjct: 137 EYHSFPLPFDNASHQLGGAIVNDVQIGIVVIALVIMAGLMWLVHQTRMGRAMRAVAENPA 196 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I F + SA +AG +A+ + M F + + +LGG+ Sbjct: 197 AATLMGVDINSVISFTFMLGSALAAIAGFMVSANYGIVHYYM-GFMLGLKAFTAAVLGGI 255 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G L + L V++ R Sbjct: 256 GNLRGAMVGGVLLGLIESLGAGYIGDLTGGFLG-----SNYQDVFAFFVLIAVLIFRPSG 310 Query: 339 LLRLR 343 LL + Sbjct: 311 LLGEK 315 >gi|254503754|ref|ZP_05115905.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222439825|gb|EEE46504.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 327 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 102/303 (33%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + ++ + +I + A GL I +G GL+SL + + IG Y+ IL Sbjct: 18 VPLWAHYSGEPFTVTLATRAVILALAAVGLHIALGLGGLVSLGHAVFFGIGGYAMGILAH 77 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 L+ + ++ L ++ L+ I Sbjct: 78 HAQTYTPLMEWPFVVEGTKSMPVIWLVAVVLSSVVAYFIGLLSLRTSGVYFIMITLAFGQ 137 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + + G S+ FP + I Y V + L+R+ Sbjct: 138 MFFFFAISWSAYGGEDGLSIYVRNGFPGVNTLVPIQFYAVCFVILAAVMFFAARLQRSPF 197 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A R ++ + +L AF +S A G+AGA FA +SP MF + + Sbjct: 198 GLALNAARQVPDRVETVGLNPMRLRLVAFVLSGAITGLAGALFADLNRFVSPTMFSWQMS 257 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 +I +ILGG+ L + + + + ++ Y+ L + ++ Sbjct: 258 GELIIFIILGGLGRLYGPVVGAVVFVALEHILGDLSDYWHIYLGVLLLGVVLFARGGIIG 317 Query: 327 ALF 329 L Sbjct: 318 MLL 320 >gi|330953090|gb|EGH53350.1| inner-membrane translocator [Pseudomonas syringae Cit 7] Length = 529 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|317401363|gb|EFV81999.1| branched-chain amino acid transport system permease [Achromobacter xylosoxidans C54] Length = 354 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 141/343 (41%), Gaps = 23/343 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + + + F+ + A S + ++ I LI + A GL+I+VG Sbjct: 18 QIFPIRQDR------VFIWLLLAVAFIAIPALSSDYLLRAILIPFLILSLAAVGLNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY+ G R+ ++ I + + G+I G+PSL+ RG Sbjct: 72 YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLIVQILLGGCFATIVGVIFGIPSLRIRGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL ++ TN + V+ V Sbjct: 132 YLAVATLAAQFFVDWAFLRIPFFTNYSSSGNVSVPPLTAF-------------GLPVQSA 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +L + + + + L R AI W IRD A + ++AKL+AFAVSS Sbjct: 179 LEKYLFVLILVVVFSLLAKNLVRGAIGRQWMAIRDMDVAASVIGIRPMYAKLTAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +G+AGA + P F + + ++ +VI+GG+ S+ A ++ V Sbjct: 239 IVGVAGALWGYIHLGSWEPLAFDLTRSFQLLFMVIIGGLGSIIGSFFGAAFIVLVPVALT 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L + + + ++ H L RL Sbjct: 299 NV--PHMLGLSLSVDTAAHVEHMVFGALIVFFLIAEPHGLARL 339 >gi|134093664|ref|YP_001098739.1| putative ABC transporter permease [Herminiimonas arsenicoxydans] gi|133737567|emb|CAL60610.1| putative ABC-type branched-chain amino acid transport system, permease component [Herminiimonas arsenicoxydans] Length = 343 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 112/325 (34%), Gaps = 24/325 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA-YAI 76 L ++ L + +Y ++ I Y + G +++ G GLLS + Sbjct: 30 LIAGGLVIAALVIAPLIVSQYYMTLLIPFFAYAVILLGFNLLFGYGGLLSFGHALFIAIG 89 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + ++ +S L++ + + S + + + +F G + + TL +F + Sbjct: 90 AYAAAALVSKTGMVSFELMLLTAIVASTIISIPIAWLASRFTGIFFGMLTLSFGMLFHSF 149 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L K+ IT G +G+ V F + YY L M L Sbjct: 150 LNKFYYITGGDSGMRVPRPTLFGMELDQFDKT--------AFLGGPFYYYCLVMILLLTL 201 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + R+ RDN L I + AF +S+ + + G + Sbjct: 202 VMWRIVRSPYGIHLMASRDNAVKALYLGVKIRSVRAIAFVISAVYASIGGVILGVNTGLA 261 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P++ ++ + ++ + +LGG + I + + + Y+ Sbjct: 262 DPELAYWTHSGHLVFMAVLGGYQEFLGPVLGAFVFILLQDELSSLTQYW----------- 310 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + L +++++ ++ Sbjct: 311 ----RFFLGAILAILVVVLPGGIMG 331 >gi|269954917|ref|YP_003324706.1| inner-membrane translocator [Xylanimonas cellulosilytica DSM 15894] gi|269303598|gb|ACZ29148.1| inner-membrane translocator [Xylanimonas cellulosilytica DSM 15894] Length = 328 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 114/313 (36%), Gaps = 9/313 (2%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + + + A GL++ G GLL++ +GAY + I L + V+ Sbjct: 16 IAPTTAAFALAAIGLNLHFGYTGLLNMGQAGFMLLGAYGFGIATIAG-APFLLALLVAIG 74 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-----LIKWKPITNGKAGIYVADRL 156 +I+G+P+LK RGDYLAI T+ +EI + + +W +G G + Sbjct: 75 AGIVFALILGIPTLKLRGDYLAIVTISAAEIVRWLGRSTVFQEWTGGASGLLGKTYKESF 134 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMY-YVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L + + G+ L+ + + R+ + IR+ Sbjct: 135 QALSFLPEGRTAIGPLEYINNGSDSWWTRLFAWGLVLLAVLFVWLVTRSPWGRVLKGIRE 194 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A +L + K+ A + A + G + I+PD + ++++L Sbjct: 195 DEDAVRALGKNVYAMKMQALVLGGALGALGGVLYVLP-SAITPDAMGRTMTFFTWTVLLL 253 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG +L + + V +L L+ + L L+++ R Sbjct: 254 GGAATLFGPVLGSMLFFFVYMALRTGMRTGLGDVLG-STKVEQIGGILVGVTLMLLVIFR 312 Query: 336 SHSLLRLRTPSNF 348 +L + F Sbjct: 313 PQGILGNKKELAF 325 >gi|24380046|ref|NP_722001.1| putative branched chain amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|290579975|ref|YP_003484367.1| putative branched chain amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|24378037|gb|AAN59307.1|AE014996_10 putative branched chain amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|254996874|dbj|BAH87475.1| putative branched chain amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 289 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 104/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L ++Y ++ ++ + + Sbjct: 5 LINGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLITKYHMNFFVALVL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ G+++ + + + IA LI + L G L Sbjct: 65 TMVLTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFFLEYSMVRLVGANKHAFPQTLAT 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + V +L FL ++ +++T + A R + + Sbjct: 125 VK-----------YNLGPVSVTNVQLIILGVSIFLMLALQFIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G G + + P M I +LGG+ Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAGGVLIGLYYNSVDPLM-GMVPGIKAFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + ++ L +++L+R Sbjct: 233 GIIPGAAVGGFMIGLLET-------------FSVSIGLASYKDAVVYAVLIIILLVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|238784255|ref|ZP_04628267.1| Branched-chain amino acid transport system, permease component [Yersinia bercovieri ATCC 43970] gi|238714822|gb|EEQ06822.1| Branched-chain amino acid transport system, permease component [Yersinia bercovieri ATCC 43970] Length = 538 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY ++ S + + + +++ + Sbjct: 265 ITYGLLGVINMAHGEMLMLGAYCAYLVQSLFQQFAPHWLALYPLVALPVAFFITAGIGMA 324 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + Sbjct: 325 LER--TVIRHLYGRPLETLLATWGISLMLIQSVRMIFGAQNLEVANPAWLSGGLQILPNL 382 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 383 VLPWNRIAVIAFVVVILLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 442 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 443 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 500 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 501 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 535 >gi|327190268|gb|EGE57369.1| amino acid ABC transporter [Rhizobium etli CNPAF512] Length = 347 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 128/328 (39%), Gaps = 16/328 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L V +L + S +++ + L + GL+++ G G +SL A+ Sbjct: 18 LAPVAIVAGAYLVVPFIGSTYLFEAILLPFLALSLAGVGLNLLTGYAGQVSLGSAAFMAV 77 Query: 77 GAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ R + I ++ + + G++ GLPSL+ +G YLA++TL Q Sbjct: 78 GAFAAYNFNLRVDGLPLIVSILLAGLSAAVIGIVFGLPSLRLKGFYLAVSTLAAQFFVQW 137 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L K+ +N A + + Y L + + Sbjct: 138 ALTKFSWFSNDSASGVIDAPALT-------------LAGLEFTGPVGRYLFSLTVVVMLT 184 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + L + + +RDN+ A + ++ KL AFA+SS I +AGA +A A Sbjct: 185 FLAHRLTTSQTGRNFIAVRDNETAARIIGVPVLKTKLLAFAISSFIIAVAGALWAFAYLR 244 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F + ++ I+I+GG+ S A+++ L + + L Sbjct: 245 TVEPAGFNLDRSFQILFIIIIGGLASTRGAFLGAALIVVFPLLLSRLGSFLLGDLFDSGV 304 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 +M ++ + L +++ L L Sbjct: 305 -LDMSQRIVLGALIILFLILEPDGLSSL 331 >gi|332525000|ref|ZP_08401184.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] gi|332108293|gb|EGJ09517.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] Length = 352 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 98/357 (27%), Gaps = 33/357 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I V L A Y S+ +IL Y + A + ++ G G+LSL + Sbjct: 10 ITITTVVPLLNLAVPETSALHLSDYAVSLLGKILCYAICALAMDLIWGYTGILSLGHGLF 69 Query: 74 YAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 +A+G Y+ + W +P S + M + L Sbjct: 70 FALGGYAMGMYLMRQIGRDGQYRSTLPDFMVFLDWKELPWHWAFSDSFVFQMAMVVLVPG 129 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 L + + A + + R F R + Sbjct: 130 LLALVFGFFAFRSRIKGVYFSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRILELPIA 189 Query: 179 YEIFMYYVLLG---MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + + + + + + IRD + + KLS + Sbjct: 190 TSGMRVALCVISGLVLIGFFVMARAIVTSKYGRVLQAIRDAESRVMFTGYNPLAYKLSIW 249 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+ G+AGA + I+P + +I + +GG +L + G Sbjct: 250 TLSAVMCGVAGALYVPQVGIINPGEMSPAASIEIAIWTAVGGRATLVGPIVGAFFVNGAK 309 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR-LRTPSNFLER 351 F +F + V L L+ L+ R Sbjct: 310 SW--------------FTVAFPEFWLFFLGALFIAVTLFLPDGLVGLLKRRKKETRR 352 >gi|291297023|ref|YP_003508421.1| inner-membrane translocator [Meiothermus ruber DSM 1279] gi|290471982|gb|ADD29401.1| inner-membrane translocator [Meiothermus ruber DSM 1279] Length = 326 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 101/323 (31%), Gaps = 15/323 (4%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------- 80 + + + + +Y M A G ++V G LGL++ + IGA Sbjct: 3 VADLFAILPQTLLEGLLLGFVYAMVALGYTMVYGVLGLINFAHSEVFMIGAVIGLEVFRF 62 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 + S + ++L+ V+ + + IM + +F L + I Sbjct: 63 WGNPESPVIANPFVLLLVALIFAAVGSGIMAVLVERFAYRPLRKRGSKNILVPMITAIGV 122 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF--LSASII 198 + IY A R R+ + I + +++ + + + Sbjct: 123 SFLLQDLTRIYAALRHNEFNMQYRTYDALNQTFELPFQTIIQVKGIIIIVVSILMLIGLT 182 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + RT + A R + + + + F + + G+AG F ++P Sbjct: 183 YLVNRTKLGKAIRAVSQDMQTASLMGINPDVIISRTFLIGGSLGGVAGVLFGLLYTNVTP 242 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + +LGG+ ++ IL + L + N Sbjct: 243 YS-GVLPGLKAFTSAVLGGIGNIPGAMVGGLILGQLETLSGTYLPFLTNGNFG-----TE 296 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + L L++L R + Sbjct: 297 YKDVFAFLTLVLLLLFRPQGIFG 319 >gi|194289898|ref|YP_002005805.1| ABC transporter [Cupriavidus taiwanensis LMG 19424] gi|193223733|emb|CAQ69740.1| putative ABC TRANSPORTER, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 358 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 114/320 (35%), Gaps = 11/320 (3%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-- 88 +M +I I+V+ +++G G++S + + IG Y I SR Sbjct: 30 PFAFPGARALNMAAKICIFVVLVASYDLLLGYTGIVSFAHTMFFGIGGYGVAIAMSRMEP 89 Query: 89 -GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 ++ + +S +++GL SL+ R + A+ TL ++ F ++ + T G+ Sbjct: 90 GWGALLAGTAGALAVSALLALLIGLFSLRVRAIFFAMITLAVATAFATLVSQLSEWTGGE 149 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ + S + P S ++ YY++ + +L + + Sbjct: 150 DGLTFKVPEVLRPGFMLSDAEWLGVPLSG---KLLSYYLVFAGALVLFLALLRIVNSPFG 206 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSEN 266 + IR+N ++ + + + +S+ F +AG A F Sbjct: 207 RVLQAIRENDFRAEAIGYRTVVYRTVSTVLSAMFATLAGVLMAVWLRYNGPDTSLSFEIM 266 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGM----NFYYFNSLLKFDCSFNMRHTT 322 + ++ IV++GGM +L T + + + + L R Sbjct: 267 VDILLIVVIGGMGTLYGAVIGTVLFLVAQTYLQDVMKLASDGTAALPLLSALLHPDRWLL 326 Query: 323 LMVIALFLVILMRSHSLLRL 342 + + L + ++ Sbjct: 327 WLGLLFVLSVYYFPQGVVGR 346 >gi|187929270|ref|YP_001899757.1| urea ABC transporter permease protein UrtC [Ralstonia pickettii 12J] gi|187726160|gb|ACD27325.1| urea ABC transporter, permease protein UrtC [Ralstonia pickettii 12J] Length = 388 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 95/348 (27%), Gaps = 32/348 (9%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 ++ + LL Y ++ +I+ Y + A L +V G G+LSL + Sbjct: 28 SLIVCIGAPVCALLVPEGSPLHLSAYALTLIGKIMCYALAALALDLVWGYCGILSLGHGV 87 Query: 73 AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 +A+G Y+ + +++ L Sbjct: 88 FFALGGYAMGMYLMRSIGREGVYKSDLPDFMVFLDWKELPWFWHGTEHFAWAMLLVILVP 147 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + A + +I + + + R FP Sbjct: 148 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 207 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 S + ++ L+ + + IRD + + KL Sbjct: 208 SALPTRTVLFVATFVALVLAFIACRAIVTSKFGRVVTAIRDAEARVMFSGYNPLGYKLFV 267 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 + S+ G+AGA + I+P +I + V +GG +L ++ G Sbjct: 268 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPIIGAFLVNGA 327 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L ++ LV L + +L L Sbjct: 328 KTLLTAW--------------VPEYWLFVLGAIFVLVTLYLPNGVLGL 361 >gi|291296911|ref|YP_003508309.1| ABC transporter-like protein [Meiothermus ruber DSM 1279] gi|290471870|gb|ADD29289.1| ABC transporter related protein [Meiothermus ruber DSM 1279] Length = 559 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 112/295 (37%), Gaps = 21/295 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-GSRYGLSIWLL 95 Y + +LI M + +V G G++SL + +G + + + L Sbjct: 24 NYWLFLLTSMLISSMVTLSVGLVSGMAGMISLGQLSFAGVGGWMVAYFNANNLPIPFVLQ 83 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + A+++ G+++GLP+L+ RG +LA+ T ++ G G V Sbjct: 84 VLIGALVAVPLGIVIGLPALRVRGVHLAVVTFGF-AAVADLFFTILNFPGGVMGKPVLRP 142 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 F+ ++ Y+ L + L + L R+ + +AW ++ Sbjct: 143 -------------------DFLSHDRSYYWFCLFLFVLLVLGVNALYRSRLGSAWLAVKH 183 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++A ++ + KL AFA+S+ G++G A +S F + ++I+ + I+ Sbjct: 184 SERAAAAMGLNVAATKLWAFAMSAFIAGLSGGLLAGQVGLLSATNFSPTASLILFASAIM 243 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 G + A + V E+ ++ L F I Sbjct: 244 VGARYPAGAVLAGVMAWLVPEVLGRLHLSQNLGNLIFALGTIAALKAGGGIFEVA 298 >gi|254428836|ref|ZP_05042543.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] gi|196195005|gb|EDX89964.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] Length = 300 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 94/303 (31%), Gaps = 27/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A GL++V G L + + Y +GAY I +G++ W+ + + Sbjct: 21 VLNGLTLGSIYGLVALGLTLVYGILHVPNFAHGALYMVGAYVSYITMVDFGVNYWVAMLL 80 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A+ A ++ D I I + L + G + Sbjct: 81 AAVAVAALAVLCERLVFNPLRDAPPIHDKIAAIGIMLFLEALVQMQWGAEFRRMPTP--- 137 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ G L A + L+L++T + + N++ Sbjct: 138 ---------YTEILDIAGMTIPAQRVLIIAGAFSLMAVLHLFLKKTMTGSTIVAMAQNRE 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 F + + FA+S A + FA + + I+ILGGM Sbjct: 189 GAFLVGIDANRVAMMTFAISGALAAVGATLFAP--INLVYPAMGHLLIMKAFVIIILGGM 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + L +++ ++ Sbjct: 247 GSIPGAIVGGLIIGFAEAFGGFYIS-------------TDYKDIIAFALLVVILSIKPTG 293 Query: 339 LLR 341 L Sbjct: 294 LFS 296 >gi|300702490|ref|YP_003744090.1| branched-chain amino acid transporter permease, membrane component (livm) [Ralstonia solanacearum CFBP2957] gi|299070151|emb|CBJ41441.1| putative Branched-chain amino acid transport system permease, membrane component (livM) [Ralstonia solanacearum CFBP2957] Length = 330 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 119/300 (39%), Gaps = 17/300 (5%) Query: 46 ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMIS 103 +L +V+FA ++++G GLLS + Y L + ++ + + Sbjct: 35 VLCFVLFASAFNLLLGYTGLLSFGHAAFFGGAGYVAGYLMTNQSLHVTPEVGLLAGTAAG 94 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 G+++GL +++ +G Y A+ TL ++++F ++ T G+ G+ R Sbjct: 95 ALIGLVVGLLAIRRQGIYFAMITLALAQMFYFFCLQAP-FTGGEDGLQGVPR-------- 145 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 F + ++ +YY +L + + +I+ + + I++N+ SL Sbjct: 146 -----GKLFGVLDLSSDLTLYYFVLVVVVAAFLVIVRTIHSPFGQILKAIKENEPRAISL 200 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 KL AF +S+A G+AGA + ++ + VI + ++GG+ LS Sbjct: 201 GYDTDRFKLLAFVLSAALSGLAGALKTVVLGFETLTDVHWAMSGSVILMTLVGGLGILSG 260 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FNMRHTTLMVIALFLVILMRSHSLLRL 342 A++I + + + + TT+ + +L ++ Sbjct: 261 PILGAALVIALENKLGDIGTFLAGVTGVDGFNVLGESVTTVTGAIFVICVLTFRRGIMGE 320 >gi|91789918|ref|YP_550870.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91699143|gb|ABE45972.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 323 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 110/286 (38%), Gaps = 14/286 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY + L I + Sbjct: 31 FVMKLLCFALFACAFNLLLGFTGLLSFGHAAFFGSAAYVTGWFIKSQSWTPELGILAGTV 90 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 +G G+++G +++ +G Y A+ TL ++++ + ++ Sbjct: 91 AAGLIGLVVGAVAIRRQGIYFAMITLAIAQMVFFVCLQA--------------PFTGGED 136 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R + + MYY ++ + L I + + + IR+N+ Sbjct: 137 GLQGVPRGRLLGLLSLESDTTMYYFVVAVFVLCFLGISRIVHSPFGQVLKMIRENEPRAI 196 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +SSA G+AG+ + +S + VI + +LGG+ + Sbjct: 197 SLGYQVDRYKLLAFVLSSALAGLAGSLKTLVMGFATLSDVHWSMSGEVILMTLLGGVGTF 256 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 I+I + L + ++ + V+ Sbjct: 257 FGPVFGAGIVISLQNLLADKVGSWVTVIIGAIFVVCVLAFRKGVVG 302 >gi|27376176|ref|NP_767705.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27349315|dbj|BAC46330.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 314 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 123/328 (37%), Gaps = 29/328 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 ++ L+L +I ++ +I+I + A L++++G G++S Sbjct: 9 AVTALMLAGLVLLPLYSQASGNVFILTLFTRIVILALAAASLNLIMGFGGMMSFGHAAYL 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y+ +L S ++ PV+ S +++G SL+ RG Y + TL +++ Sbjct: 69 GIGGYAVGMLAQEGVGSGFIQFPVALAASAIYALVIGALSLRTRGVYFIMITLAFAQMAY 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + R + + YY+ L Sbjct: 129 YVASGLARYGG--------------DDGLTVYKRSDFSGLINLGNRVQFYYLCLACLLGV 174 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +I + + + +R N++ ++ +L F +S G+AGA A + D Sbjct: 175 LFLIWRIVNSRFGLVVQGLRSNEQRMQAIGFPAKRYQLVCFVISGMMCGLAGALLANNTD 234 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISP + ++ + ++ +VILGGM +L + + + E + Y+ Sbjct: 235 FISPAVMYWTRSGDLMVMVILGGMGTLFGPVMGAVVFLLLEEFLSQITEYW--------- 285 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 +M L L++L ++ + Sbjct: 286 ------ALIMGPLLLLIVLFGRGGIMGM 307 >gi|330989139|gb|EGH87242.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 542 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 269 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 328 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 G + + + +L W + +A + + + Sbjct: 329 LGR--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 386 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 387 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 446 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 447 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 504 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 505 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 539 >gi|149375497|ref|ZP_01893267.1| ABC-type branched-chain amino acid transport system [Marinobacter algicola DG893] gi|149360202|gb|EDM48656.1| ABC-type branched-chain amino acid transport system [Marinobacter algicola DG893] Length = 318 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 114/326 (34%), Gaps = 26/326 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + ++ ++ + + ILI +F L +VG +GL++L + Y + Sbjct: 10 IFLAIFFVIALCIPLFLEDNSFFVGKATTILILAVFVMSLDFLVGRVGLVTLGHALFYGL 69 Query: 77 GAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 G Y +VI+ Y ++ W+ IS +++G+ L+ G Y + TL +S++ Sbjct: 70 GGYLFVIVTPEYEAVNFWIYAMYIMGISALVALVVGVVVLRTSGIYFIMITLAISQMAYY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L ++ F + YY+ L ++ Sbjct: 130 FFFDSLEFGG----------NDGLFIFMKPETSIFGLNFLNLDNPTHFYYLSLLAVLVTL 179 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I + R+ R N + +L I +L ++ + S AG FA Sbjct: 180 LAIKIILRSRFGRIVEASRLNPERTEALGYNIFAFRLISYIIGSTLAAYAGLLFALQYGY 239 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P + + + + ILGGM ++ T G+ M+ + Sbjct: 240 VNPQFMTWEMSGTALVMSILGGMGTIYGAILGTITYEGLQYFFEHMSEDW---------- 289 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 M A+ L++L+ L Sbjct: 290 -----MLFMGGAIILMVLLLRKGLAG 310 >gi|316932530|ref|YP_004107512.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315600244|gb|ADU42779.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 330 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 110/322 (34%), Gaps = 26/322 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 +L L Q Y+ ++LI +FA +V G G++S + + Y Sbjct: 7 IAMLALFLLLPLVLQDYLTVFMTRVLILCLFALSFDLVWGYAGIMSFGQAVFFGGAGYGV 66 Query: 82 VILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +LG S+ L++P +I A +++G L R I + + + Sbjct: 67 ALLGRDLGISSMLLVVPAGVLIGFALALLIGGFLLLGRNPSSVIFVSLGTLTASYAFDRL 126 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 G + S + YY+ L + ++ + Sbjct: 127 ARGWYYLGGQNGIPSIPQ-----------MTIGSYDLGEGAVFYYLALAILIAVYAVCRY 175 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R+ A +R+N++ + K F++ A G+AG+ +A + P+M Sbjct: 176 LVRSQFGLALAGLRENEQRISFFGYKVQHLKAIIFSLGGAIAGLAGSLYAFHEGFVWPNM 235 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + V+ V+ GG +L T ++ V S+ Sbjct: 236 LGVVMSTQVVLYVLFGGSGTLIGAVIGTVVIEIVSFWLSN--------------SYQDIW 281 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 ++ + LVIL R L+ L Sbjct: 282 PIILGALMLLVILFRPAGLISL 303 >gi|114568059|ref|YP_755213.1| high affinity branched-chain amino acid ABC transporter permease [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338994|gb|ABI69842.1| high affinity branched-chain amino acid ABC transporter, permease protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 293 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 102/303 (33%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ +GAY + G +I+ + Sbjct: 8 LINGLSLGAIYALIALGYTMVYGIIMLINFAHGDIMMVGAYVGFFSIAVLGSNIFAALIF 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ + K + IA LI + L + + + Sbjct: 68 AMLSCAVLGVLIEKIAYKPLRNSSRIAALITAIGVSLFLEYFTLFLLTPQQRVFPEAAF- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ ++ ++ + L ++ ++RT A R + +++ Sbjct: 127 ---------PLHKYQIGGLLVSNKDIFIFVLAVILMIALQYIIKRTRTGKAMRAVSLDRE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + ++ FA+ S+ AG + I+P M + +LGG+ Sbjct: 178 AAILMGISVDRTISITFAIGSSLAAAAGVMIGIYYNTINPLM-GIIPGLKAFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + ++ + + G + + F L L++L++ Sbjct: 237 GIIPGAMVGGFLMGILETMVSGYGSTLYRDAVAFG-------------VLILILLVKPTG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|186685166|ref|YP_001868362.1| inner-membrane translocator [Nostoc punctiforme PCC 73102] gi|186467618|gb|ACC83419.1| inner-membrane translocator [Nostoc punctiforme PCC 73102] Length = 316 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 105/319 (32%), Gaps = 31/319 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--------------VIL 84 + IY +FA G ++V LG+++L + +GAY Sbjct: 10 FLNGLSIGSIYAIFALGYTLVYSILGIINLAHGAIFTLGAYFTYALMGGNFGFNGLLANA 69 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 L + + + + ++G G++M + + + L + ++ I Sbjct: 70 ALPIKLPFAIALILGSTLAGLIGVVMERVAFQPLRRQGSDPLLTVVSSLGVAVVIVNLIQ 129 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G S F P + + + A I ++ RT Sbjct: 130 YLVGAESYTYPADTYGNLPPS--INFGTPEKEIPIRTVQIIIFAVSVAIVAIITYFINRT 187 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A + I ++ L + F +SS G+AG A+S I+ F + Sbjct: 188 KYGKAMQAIAEDPTTASLLGINSDRFIILTFFISSFLAGLAGTLVASSV-SIAGPYFGIA 246 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + +++++LGG+ S+ ++ V ++ + Sbjct: 247 FGLRGLAVIVLGGLGSIPGAVLGGLLIGLVEAFV--------------PTEYSGYKEAVA 292 Query: 325 VIALFLVILMRSHSLLRLR 343 LF+++L+R LL R Sbjct: 293 YGILFIMLLVRPQGLLGRR 311 >gi|84514517|ref|ZP_01001881.1| ABC branched chain amino acid transporter, inner membrane subunit [Loktanella vestfoldensis SKA53] gi|84511568|gb|EAQ08021.1| ABC branched chain amino acid transporter, inner membrane subunit [Loktanella vestfoldensis SKA53] Length = 652 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 94/320 (29%), Gaps = 24/320 (7%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88 + + I+ + A GL+I G + ++++ +GAY+ + Sbjct: 353 VALFQFLSLSFDALSLASIFFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQTVIP 412 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-TLIMSEIFQNILIKWKPITNGK 147 + L + + + + + L R Y TL+ + L + G Sbjct: 413 DYTASLAVALPLAFAVTFLAGVVMERLVIRHLYTRPLETLLATFGISIALQQLAKNIFGT 472 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 V + + V + + ++ L RT + Sbjct: 473 QARPVTAP---------DWLAGAIQINDLVSVAAVRVGIFIMAALFLLLLLYILNRTRLG 523 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 R + N S+ + F + S G+AG S + Sbjct: 524 LEVRAVTQNPGMAASMGINPDRINMLTFGLGSGIAGVAGVAIGLVAQVTSEMGANYIVQS 583 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +V + S+ A++ + + F+ + + T MV+ Sbjct: 584 FMTVVVGG--VGSVFGTLAGAALIGSLQ-----------KGIEWFNPANTLAAQTYMVLF 630 Query: 328 LFLVILMRSHSLLRLRTPSN 347 + L I R ++ L+ + Sbjct: 631 IILFIQFRPKGIVALKGRAA 650 >gi|228978582|ref|ZP_04138956.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis Bt407] gi|228781132|gb|EEM29336.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis Bt407] gi|326939671|gb|AEA15567.1| branched chain amino acid ABC transporter permease [Bacillus thuringiensis serovar chinensis CT-43] Length = 286 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 116/301 (38%), Gaps = 31/301 (10%) Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIM 110 +++G G++S + + IGAY +L R + + I + +IS I+ Sbjct: 1 MSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVAAIIISAIVSYII 60 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 GLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPDVFRDRF-------- 112 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 YYV L + ++ +++I + I N++ +L ++ Sbjct: 113 -----------TFYYVTLICLLIIFVLLRLFTKSSIGKVLKAISQNEQRVEALGYKVLHY 161 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 K+ A V+ ++G F + ++ +F + + + ++GG+ +L + I Sbjct: 162 KIIASIVAGVVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLIGAIAGSGI 221 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + + Y R T ++ + +V+L+ L+ + Sbjct: 222 IESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKGLVGTVKKLKSFK 272 Query: 351 R 351 R Sbjct: 273 R 273 >gi|123443087|ref|YP_001007061.1| branched chain amino acid ABC transporter permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090048|emb|CAL12911.1| putative Branched-chain amino acid transport system, permease component [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 533 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 81/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ S + + + +++ + Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQLAPHWLALYPLVALPVAFFITAGIGMA 319 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ + L + + + Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQGVRMIFGAQNLEVANPAWLSGGVQLLPNL 377 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 378 VLPWNRIAVIAFVVIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGKVDMLAFGL 437 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 438 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 496 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530 >gi|317125180|ref|YP_004099292.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Intrasporangium calvum DSM 43043] gi|315589268|gb|ADU48565.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Intrasporangium calvum DSM 43043] Length = 291 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 108/306 (35%), Gaps = 22/306 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY +FA G ++V G L L+L +A+ A+ + L + GL++W+ +P+ Sbjct: 4 LLNGVFIGSIYALFAIGFTLVFGILDRLNLTHPAVFAVSAFVGIELVADAGLTVWVALPI 63 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ G+++ + + + LI + + Sbjct: 64 VLVLGAVLGLVIERVAFRPLKNRPDAHFAG--------LISSIALAGMFIALLQWRYGPD 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + +LL L + + R+ + R I +N Sbjct: 116 TRRFPAGSFPETPIEFGGVAVTVLQVAILLISVVLMIGLTWLVARSRLGRGMRAIAENPT 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L + FA+SSA G+AGA FA + + M + + ++++I+GGM Sbjct: 176 AAKVLGINVDRVTSVTFAISSALGGVAGALFAMNVNSAQLGM-GAAIELKGLAVIIVGGM 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL L + L+ F LFL++L+R Sbjct: 235 GSLPGALIGGLALGLAEVFAVQYIGSSWRDLIAFG-------------LLFLILLVRPQG 281 Query: 339 LLRLRT 344 L R Sbjct: 282 LFGARK 287 >gi|299131696|ref|ZP_07024891.1| inner-membrane translocator [Afipia sp. 1NLS2] gi|298591833|gb|EFI52033.1| inner-membrane translocator [Afipia sp. 1NLS2] Length = 304 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 87/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + IY + A G ++V G +G+++ + IG + +I +PV Sbjct: 8 LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLVLVSLGITAVPV 67 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ M I + + + + R+ Sbjct: 68 VLLLVVLVAMATTALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLSNFSQVAQGARVK 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + F V V++ L A + RT + R +Q Sbjct: 128 PVPPIITGGYTLFEQDGFVVRLSNIQIIVVVTTVVLLAIFSWMVTRTRLGRDMRACEQDQ 187 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 L + F + ++ +AG + + M F I + +LGG Sbjct: 188 TMAALLGVDVDRTISMTFVIGASLAAVAGMMYLLYYGVVDFYM-GFVAGIKAFTAAVLGG 246 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + SL + + L + + F L +V++ Sbjct: 247 IGSLPGAMLGGLAIGLIETLWSAYFSSEYKDVAAFS-------------ILIVVLIFLPT 293 Query: 338 SLLRL 342 LL Sbjct: 294 GLLGR 298 >gi|104783824|ref|YP_610322.1| branched-chain amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95112811|emb|CAK17539.1| putative branched-chain amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 506 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 233 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRYAPGAIEFYPLIALPVAFAVSAGVGMA 292 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + + + + + + Sbjct: 293 LER--TVIRHLYGRPLETLLATWGISLILIQAVRLIFGAQNVEVSNPAWLSGGIQVLPNL 350 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + L L RT + R + N+ + + AF + Sbjct: 351 VLPYNRLVIIGFALAVVVLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 410 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L +L Sbjct: 411 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 468 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 469 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 503 >gi|52143480|ref|YP_083348.1| branched chain amino acid ABC transporter, permease [Bacillus cereus E33L] gi|51976949|gb|AAU18499.1| branched chain amino acid ABC transporter, permease [Bacillus cereus E33L] Length = 333 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 132/334 (39%), Gaps = 31/334 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R T ++ + +V+L+ L+ ++R Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKSLKNMKR 320 >gi|291286812|ref|YP_003503628.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809] gi|290883972|gb|ADD67672.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809] Length = 300 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 17/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A G ++V G + L++ Y IGA++ +I S + + W + + Sbjct: 8 FLGGLTRGSIYALIALGYTMVYGIIQLINFAHGEIYMIGAFTALIFASVFSILGWPVAAI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + A + + LI ++ + + Sbjct: 68 FIIATLAAVVYSSAYGYTIEKIAYKPLRNA---PRLSPLISAIGMSLFLQNYVLLAQTSD 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + F I+ ++ + + +++ T + A R ++ Sbjct: 125 FLPFPQLIPDFEFMEPISHIFSSAELAIVSTTIIVMLLLTFFIKFTNMGKAMRATAQDKT 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + SA + G A +++ F I + +LGG+ Sbjct: 185 MALLIGINVDRVISVTFIIGSALAALGGVLIANHIGQVNFY-IGFIAGIKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL G + + F L L+++ R Sbjct: 244 GSIPGAVLGALILGWTESFATGYISSDYEDVFAF-------------ALLVLILIFRPAG 290 Query: 339 LLRLRT 344 LL Sbjct: 291 LLGRSE 296 >gi|218781116|ref|YP_002432434.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218762500|gb|ACL04966.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 440 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 53/331 (16%), Positives = 117/331 (35%), Gaps = 32/331 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + +L+ L L ++ SM Q+ I ++FA ++++G GLLS + Y + Sbjct: 31 AGIWLGFILISLALPKIFDSRFAMSMFNQMGIAIVFALSFNMLLGQGGLLSFGHAVFYGM 90 Query: 77 GAY-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 G + ++ + LL + + G I+G S + A+ T+ + E Sbjct: 91 GGFGAIHVLCMVNDGELRIYTELLPLAGGIFAAILGFILGFISTRRAAIPFALITMGIGE 150 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + + G+ GI I +YY++L Sbjct: 151 LLLASSLLLPSFFGGEEGIA------------GDRWTEITILPFKYGQAIEVYYLILIWM 198 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 FLS + + L +T + +RDN + + + F +++ F G+AG FA Sbjct: 199 FLSVAAMYLLTKTPLGQMANAVRDNHQRAQFIGYDPHKVRTFQFTLAAFFAGIAGGLFAI 258 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + + ++ + + ++ + ++GG+T + + + + + Sbjct: 259 NYEMVTAENLGMLPSTDILMMTVIGGITYFFGPILGAIFITFLQLVVSNITHAW------ 312 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L+++ L L Sbjct: 313 ---------MLYFGLMFILMVMWAPDGLAGL 334 >gi|319762061|ref|YP_004125998.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330826121|ref|YP_004389424.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317116622|gb|ADU99110.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329311493|gb|AEB85908.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 333 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 123/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS AY +G + L + + Sbjct: 30 FVMKLLCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGHAVKVWGATPELGLLAGLL 89 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 A G++MG +++ +G Y + TL ++++ ++ T G+ G+ R Sbjct: 90 SGAALGLVMGWFTIRRQGIYATMITLALAQMLFFAALQLP-FTGGEDGLQGVPR------ 142 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYYV L + L+ +I+ + R I++N+ Sbjct: 143 -------GKLFGVLDLSSDMTMYYVCLVIVVLAFLLIVRTIDSPFGQVLRGIKENEPRAT 195 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AGA + +S + V+ + ++GGM +L Sbjct: 196 SLGYDTNRFKLLAFVISAAIAGLAGALKTLVLGFATLSDVHWSASGHVVLMTLVGGMGTL 255 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S A+++ + + + + + + + T + + + +L ++ Sbjct: 256 SGPLVGAAVVVALENKIGELGNLLASLTTIDWFNTLGESVTIVTGLIFVVCVLAFRRGIM 315 Query: 341 RL 342 Sbjct: 316 GE 317 >gi|83719557|ref|YP_443819.1| branched-chain amino acid ABC transporter permease [Burkholderia thailandensis E264] gi|83653382|gb|ABC37445.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 324 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 123/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + M Sbjct: 26 FMMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTTPELGVLAGTM 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 86 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R + F + ++ +YYV+L + + I+ + + I++N+ Sbjct: 132 GLQGVPRGWLFGLVDLSSDLALYYVVLVVIACACLFIVRIVHSPFGQVLVAIKENEPRAT 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AGA + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + S T + + +L ++ Sbjct: 252 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIACVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|115358140|ref|YP_775278.1| inner-membrane translocator [Burkholderia ambifaria AMMD] gi|115283428|gb|ABI88944.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia ambifaria AMMD] Length = 295 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 113/308 (36%), Gaps = 19/308 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 ++ + +Y A GL++ G GL++ + +GAY+ I S+ G + Sbjct: 2 SSFVIHLLTIGCLYATMALGLNLQAGYAGLVNFGFIAFAGLGAYAAGI-ASQLGWPLLSA 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + ++ +GA +++ + DY IATL ++EI + + +T G GI Sbjct: 61 LALAVAAAGALALVVARLGRQLAADYWGIATLAIAEILRTTALNESWLTGGAQGIGGIAP 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L+ + + V G L+ + L + A + +R+ Sbjct: 121 LFPGLRAPWAD--------------LAFLAVTAGCLALTYATYRRLTASRFGRALKVMRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + K A + +AGA + PD SE + ++V++ Sbjct: 167 EPALAVCFGYDPLALKTRACIAGALPAAVAGALATWYIGYVGPDAMIASETFALWTVVMV 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S + + T I+ + + + + L L+ + L ++ R Sbjct: 227 GGLGSHAGVLVGTLIV----QAVYALAPFLKDWLGVGSDLTGAVRLGLVGLMLLACVIWR 282 Query: 336 SHSLLRLR 343 H L+ R Sbjct: 283 PHGLVPER 290 >gi|306819905|ref|ZP_07453558.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552062|gb|EFM40000.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 294 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 95/307 (30%), Gaps = 28/307 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95 + + IY + + G ++V G + L++ +GAY + S ++L Sbjct: 7 LINGLQIGSIYALVSLGYTMVYGIVKLINFAHGDIIMVGAYVAFMCVSALTSMGLPVYLA 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + G+++ + K + I++LI + +L + Sbjct: 67 VVPAIAFCSLLGVVIEKVAYKPMRNSARISSLITAIGVSLLLQNAFMLIFSPNPRP---- 122 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 ++ + I + L + L++ ++ A + + Sbjct: 123 -------FDTVFSGKPIELGELSINISTIITITVSVVLMIILQLFITKSKAGKAMVAVSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S +A + ++ +I+P M + +L Sbjct: 176 DFSAAQLVGINVDNTISMTFAIGSGLAAVASILYVSAYPQITPTM-GSMLGLKAFVAAVL 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ + I+ V L ++ L +V+L + Sbjct: 235 GGIGIIPGAMIGGFIIGIVEALTKAYISTELADA-------------VVFAILVVVLLFK 281 Query: 336 SHSLLRL 342 + Sbjct: 282 PEGIFGT 288 >gi|225863898|ref|YP_002749276.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] gi|225787958|gb|ACO28175.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] Length = 333 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 132/334 (39%), Gaps = 31/334 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 R T ++ + +V+L+ L+ ++R Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKSLKNMKR 320 >gi|171057890|ref|YP_001790239.1| inner-membrane translocator [Leptothrix cholodnii SP-6] gi|170775335|gb|ACB33474.1| inner-membrane translocator [Leptothrix cholodnii SP-6] Length = 333 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 120/326 (36%), Gaps = 26/326 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L+ L + L S + S+ Q IY +FA G+ +++ G++S + + Sbjct: 6 LFLSTAAALAIGAALALGVSSGTLLSLLTQATIYAVFALGVGLLLRQNGMVSFGHALFFG 65 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 Y IL + I ++ + A ++GL ++ G + TL + ++ Sbjct: 66 SSGYIVAILLQLKAVPAEAAIVIAVLGLSAFAFLIGLVIVRVPGVAFGMLTLAVGQMAYL 125 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + +T G G+ V F +S + M + + L+ Sbjct: 126 TASRSRGLTGGADGMSVEWPST-----------LFGLQTSLLFSPAGMLMLSWSVLVLTL 174 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I L RT RDN++ + + + + +A+S+ +AG A + Sbjct: 175 LAIALLLRTRFGAITEAARDNEERARFIGIRTLMPQAALYALSAGVTSLAGVLAALNTGF 234 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ISP+ +S + + + +V++GG +L A A+ ++ ++ Sbjct: 235 ISPESLHWSLSGVALMMVVVGGTRALWGPALGAAVYFLAKDVLGDHAQHW---------- 284 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + AL +VI+ L Sbjct: 285 -----MAIFGTALIVVIVFAPEGLSG 305 >gi|71734857|ref|YP_276586.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555410|gb|AAZ34621.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 529 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGGVMAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKVLILALIILFIQK-------------RPQGLFALKGR 526 >gi|119717237|ref|YP_924202.1| inner-membrane translocator [Nocardioides sp. JS614] gi|119537898|gb|ABL82515.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Nocardioides sp. JS614] Length = 500 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 88/298 (29%), Gaps = 16/298 (5%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIPVSAMISGACG 107 M A GLS+V G+ GL + GA ++ I +++ L ++ G Sbjct: 216 LAMAALGLSMVFGTTGLTNFAHGELVTFGALVAWGIDLLPGQITMPGLGWNITVVVGVIV 275 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L D L L + ++ + Sbjct: 276 AFVAGGVLGLLNDKLLWKPLRIRGTGIIAMMIVSIGLSIFMRSVFQYVAGGQNHNYSQYS 335 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + V+ V++ + + L ++ T I A R + DN S + Sbjct: 336 ASKPWEIGPVLITARDVVVIIVGVAVLVVVSLAIQLTRIGKATRAVADNPGLAASSGINV 395 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + VS A ++GA ++ F +++ S V+LGG+ ++ Sbjct: 396 QQVIAVVWTVSVAIAALSGALLGITQGF--DFQLGFKLLLLMFSAVVLGGLGTIWGAMVG 453 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++ +VE+ + + + R LL Sbjct: 454 AFLIGILVEVSTLVVPSELKYVGGLAVLVLVLLV-------------RPQGLLGRAQR 498 >gi|313902800|ref|ZP_07836197.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter subterraneus DSM 13965] gi|313466920|gb|EFR62437.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter subterraneus DSM 13965] Length = 336 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 96/315 (30%), Gaps = 36/315 (11%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + IY + A G ++V G + +++ Y +GAY + + Sbjct: 43 LINGLQLGAIYALIAVGYTMVYGVVKMINFAHGDVYMVGAYVAFAVTAAAAAGDVTPGQA 102 Query: 92 ---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + + + G ++ + + + +A L + +L I G Sbjct: 103 LVLFAVGLVAAMAGCALLGALIERTAYRPLRNQPRLAALTTAIGVSLLLENLMQIIAGPN 162 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 LI + + ++ + L + A + + RT + Sbjct: 163 PRP-----------FPGLIPLRQVDLAGIVINLRFGVAFLIALVMMAGLQYLVMRTRVGK 211 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A R + + A + + + F + SA AG + RI P M + Sbjct: 212 AMRAVAYDLDAARLMGIDVNRIIAAVFMLGSALAACAGVLVGVTYARIDPFM-GIIPGLK 270 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 +LGG+ S+ ++ + + + + L Sbjct: 271 AFVAAVLGGIGSIPGAMLGGLLMGMAEVGVASVRSELTGA--------------VAFLVL 316 Query: 329 FLVILMRSHSLLRLR 343 +V+L + LL R Sbjct: 317 IIVLLFKPTGLLGER 331 >gi|256845865|ref|ZP_05551323.1| urea ABC transporter, permease UrtB [Fusobacterium sp. 3_1_36A2] gi|256719424|gb|EEU32979.1| urea ABC transporter, permease UrtB [Fusobacterium sp. 3_1_36A2] Length = 295 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 91/306 (29%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95 I + IY + + G ++V G L++ IGAY+ + + GL IW Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPIWAT 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + ++ G + + + + I+ LI + L Sbjct: 67 VIPAIIVCAVIGCLAERIAYRPLRNSPRISNLITAIGVSLFLENVFMKIFTPNTRSFPKI 126 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + I ++ LS + L++++T A Sbjct: 127 FDQAPISFGANIH----------ISFGAIVTIVITLVLSIGLQLFMKKTKYGKAMIATSQ 176 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S + + ++ +I P M I +L Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L F L +V+L + Sbjct: 236 GGIRILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282 Query: 336 SHSLLR 341 +L Sbjct: 283 PTGILG 288 >gi|254720184|ref|ZP_05181995.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. 83/13] gi|265985190|ref|ZP_06097925.1| inner-membrane translocator [Brucella sp. 83/13] gi|306838676|ref|ZP_07471512.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. NF 2653] gi|264663782|gb|EEZ34043.1| inner-membrane translocator [Brucella sp. 83/13] gi|306406319|gb|EFM62562.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. NF 2653] Length = 327 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 21 LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 76 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 77 GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 136 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 137 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 182 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 183 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 242 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 243 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 293 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 294 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 324 >gi|33600758|ref|NP_888318.1| putative permease component of branched-chain amino acid transport system [Bordetella bronchiseptica RB50] gi|33568358|emb|CAE32270.1| putative permease component of branched-chain amino acid transport system [Bordetella bronchiseptica RB50] Length = 649 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 124/327 (37%), Gaps = 34/327 (10%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L V L + Y + ILI +FA L ++G G+ S + Sbjct: 323 LRILWGVLLAALATLPLLAQWLPYAVVLTQDILIAALFAVSLHFMMGPGGMHSFGHAAYF 382 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY +L L + + + +++ +I G ++ G YLA+ TL S+I Sbjct: 383 GLGAYGAALLLKAASLPMEAALAFAPLVAALGALIFGWFCVRLSGVYLAMLTLAFSQIVW 442 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +++ +W T G G+ +L T + ++ + ++ Sbjct: 443 SVVFQWDDFTGGSNGMIGVWPAEWLSGTAYYYLALAVVAAAVLGLRRVLF---------- 492 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + A R RD+ ++ + + +AF V+ AF G+AGA +A S+ Sbjct: 493 ---------SPFGYAMRAGRDSSLRADAIGIDVKRVQWAAFVVAGAFGGLAGALYAFSKG 543 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISPD S+++ + +V+LGG+ +L + + Y+ Sbjct: 544 SISPDTMAVSKSVDGLVMVLLGGIQTLIGPVVGATAFNVLQDYIMRATEYWRA------- 596 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 L + L++L+ + Sbjct: 597 --------LFGGVILLLVLVFPQGIAG 615 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 101/307 (32%), Gaps = 18/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + + + A GLS++ G +++ Y +G AYS V L W Sbjct: 10 LLNGLAEASSLFLVAAGLSLIFGVTRIVNFAHGSLYMLGVYVAYSIVERVGGTALGFWFG 69 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +++ G G + + L+ + L+ + ++ G Sbjct: 70 LVAASLAVGVVGAAIEVVLLRRIYRAPELFQLLATFALVLVINDAALWIWGA-------- 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 R+ Y ++ +++ + + L L RT R Sbjct: 122 --EDLLGRRAPGLTGAVDLLGRQYPVYNLVLIVIGPVVLGLLWLLLTRTRWGTLVRAATQ 179 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + FA+ + G+ GA IV++ Sbjct: 180 DREMLGALGVNQAWLFTGVFALGAMLAGLGGALQLPREPA--SLSLDLRTIGDAFVIVVV 237 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A I+ + LC G+ +LL F SF+ + + LV++ R Sbjct: 238 GGMGSIPGAYVAALIIAEIKALCIGLGT---VTLLGFSVSFSKLTLVVEFAFMALVLVFR 294 Query: 336 SHSLLRL 342 L Sbjct: 295 PWGLFGR 301 >gi|86137779|ref|ZP_01056355.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] gi|85825371|gb|EAQ45570.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. MED193] Length = 410 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 109/367 (29%), Gaps = 37/367 (10%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + +L L + LL S ++ ++G + L + A + +V G G+LSL Sbjct: 15 FLAVLALFVLGVTLLAEGAGAGVISTSFVKTLG-KTLCLALIAVAMDLVWGYTGILSLGH 73 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISGACGMIMGLP 113 + +G Y + ++ ++ + L Sbjct: 74 FAFFGLGGYMIGMWLMYARTQAIVVSSLAEAPIPATESEIVDAIGNQIFGVVGSREFPLI 133 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 + L + ++ ++ W + G+Y++ + + + Sbjct: 134 WMFADSLVLQLVLVVAVPGILALVFGWLAFRSRVTGVYLSILTQAMTLGLALYLFQNDSG 193 Query: 174 SSF------------------VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 I+ ++ L W+ + R IRD Sbjct: 194 LRGNNGLSGLQNLPGLDHVPQATMSIWFFWASAAALALGYLFAAWIVSGKFGSVLRGIRD 253 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ L ++ KL F V++ G+AGA + I+P +I + V + Sbjct: 254 NEARVRFLGYSVEGYKLFIFTVTAIIAGIAGALYYPQAGIINPAEIAPVASIYLAVWVAI 313 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L + V G L + + ++ ++ LV L Sbjct: 314 GGRGRLYGAVIGAVFVSLVSSWFTGGQAPDL-DLGFYTLKWVDWWLIVLGLSFVLVTLFA 372 Query: 336 SHSLLRL 342 + L Sbjct: 373 PRGIGGL 379 >gi|146280811|ref|YP_001170964.1| ABC transporter, membrane spanning protein [Pseudomonas stutzeri A1501] gi|145569016|gb|ABP78122.1| ABC transporter, membrane spanning protein [Pseudomonas stutzeri A1501] Length = 328 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 126/330 (38%), Gaps = 29/330 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 +L+ + + +++L + +FA ++++G G+LS + AY Sbjct: 21 VLILIGVVALTLAPFYFYPIFLMKVLCFALFACAFNLLLGYTGILSFGHAAFFGGSAYFT 80 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +GL+ L I V + G+I+G +++ +G Y + TL +S++F ++ Sbjct: 81 AHAVKEWGLTPELGILVGVAGAAFLGLIIGFLAIRRQGIYSTMITLALSQMFFFFCLQAS 140 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 ++++ R F + ++MY+ +L + +I + Sbjct: 141 FTHG--------------EDGIQNIPRGHLFGLIDLEEPLYMYFFVLSVFLAGMLLIWRV 186 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + R+IR+N+ SL T+ KL AF +S+A G+AG A + Sbjct: 187 IHSPYGMILRSIRENENRAISLGYTVSRYKLGAFVMSAALAGLAGGLKALVFQFATLTDV 246 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + + V+ + +LGG+ +L A++ + T Sbjct: 247 SWQMSGEVVLMTLLGGIGTLVGPVFGAALVTTLGNYFATSELPV---------------T 291 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + I + +L+ ++ S ++ Sbjct: 292 LVTGIIFMVCVLVFRRGMIGELYASRLGKK 321 >gi|293602431|ref|ZP_06684877.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292819193|gb|EFF78228.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 354 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 80/343 (23%), Positives = 139/343 (40%), Gaps = 23/343 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + + + F+ + A S + ++ I LI + A GL+I+VG Sbjct: 18 QIFPIRQDR------IFIWLLLAVAFIAVPALSSDYLLRAILIPFLILSLAAVGLNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY+ G R+ + I + + G+I G+PSL+ RG Sbjct: 72 YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLIIQILLGGCFATLVGVIFGIPSLRIRGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL ++ TN + V+ V Sbjct: 132 YLAVATLAAQFFVDWAFLRIPFFTNYSSSGNVSVPPLTAF-------------GLPVQSA 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +L + + + + L R AI W IRD A + ++AKL+AFAVSS Sbjct: 179 MEKYLFVLILVVIFSLLAKNLVRGAIGRQWMAIRDMDVAASVIGIRPMYAKLTAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +G+AGA + P F + + ++ +VI+GG+ S+ A ++ V Sbjct: 239 IVGVAGALWGYIHLGSWEPLAFDLTRSFQLLFMVIIGGLGSIIGSFFGAAFIVLVPVALS 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + ++ H L RL Sbjct: 299 NIPHAL--GIPLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339 >gi|33596923|ref|NP_884566.1| putative permease component of branched-chain amino acid transport system [Bordetella parapertussis 12822] gi|33566374|emb|CAE37619.1| putative permease component of branched-chain amino acid transport system [Bordetella parapertussis] Length = 627 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 124/327 (37%), Gaps = 34/327 (10%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L V L + Y + ILI +FA L ++G G+ S + Sbjct: 301 LRILWGVLLAALATLPLLAQWLPYAVVLTQDILIAALFAVSLHFMMGPGGMHSFGHAAYF 360 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY +L L + + + +++ +I G ++ G YLA+ TL S+I Sbjct: 361 GLGAYGAALLLKAASLPMEAALAFAPLVAALGALIFGWFCVRLSGVYLAMLTLAFSQIVW 420 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +++ +W T G G+ +L T + ++ + ++ Sbjct: 421 SVVFQWDDFTGGSNGMIGVWPAEWLSGTAYYYLALAVVAAAVLGLRRVLF---------- 470 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + A R RD+ ++ + + +AF V+ AF G+AGA +A S+ Sbjct: 471 ---------SPFGYAMRAGRDSSLRADAIGIDVKRVQWAAFVVAGAFGGLAGALYAFSKG 521 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISPD S+++ + +V+LGG+ +L + + Y+ Sbjct: 522 SISPDTMAVSKSVDGLVMVLLGGIQTLIGPVVGATAFNVLQDYIMRATEYWRA------- 574 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 L + L++L+ + Sbjct: 575 --------LFGGVILLLVLVFPQGIAG 593 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 97/294 (32%), Gaps = 18/294 (6%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 A GLS++ G +++ Y +G AYS V L W + +++ G G Sbjct: 1 MAAGLSLIFGVTRIVNFAHGSLYMLGVYVAYSIVERVGGTALGFWFGLVAASLAVGVVGA 60 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + + L+ + L+ + ++ G R+ Sbjct: 61 AIEVVLLRRIYRAPELFQLLATFALVLVINDAALWIWGA----------EDLLGRRAPGL 110 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 Y ++ +++ + + L L RT R +++ +L Sbjct: 111 TGAVDLLGRQYPVYNLVLIVIGPVVLGLLWLLLMRTRWGTLVRAATQDREMLGALGVNQA 170 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 + FA+ + G+ GA IV++GGM S+ A Sbjct: 171 WLFTGVFALGAMLAGLGGALQLPREPA--SLSLDLRTIGDAFVIVVVGGMGSIPGAYVAA 228 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 I+ + LC G+ +LL F SF+ + + LV++ R L Sbjct: 229 LIIAEIKALCIGLGT---VTLLGFSVSFSKLTLVVEFAFMALVLVFRPWGLFGR 279 >gi|332798398|ref|YP_004459897.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp. Re1] gi|332696133|gb|AEE90590.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter sp. Re1] Length = 289 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 98/304 (32%), Gaps = 26/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + Y + A G ++V G L L++ Y IGA+ + + S Y L ++ + + Sbjct: 6 IINGLTLGSTYSLIALGYTMVYGILELINFAHSEIYMIGAFIGLTMVSVYKLPFFVALLI 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + S G+I+ + K IA LI + L + G Sbjct: 66 SMIGSCILGIIIEKAAYKPLRKANRIAPLISAIGVSIFLQNAVLMIAGPQARA------- 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S + +L L + +++T + A R +++ Sbjct: 119 ----FPSGLNITTLNIGGFRISTLQLLILFVSIILMVGLHFLIQKTKLGQAMRATAQDKE 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I FA+ SA G AG D + M F + +LGG+ Sbjct: 175 AAQLMGIKIDHVITFTFAIGSALGGAAGVLVGVYFDSVD-PMMGFFPGLKGFVAAVLGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL V + + + L ++L++ Sbjct: 234 GSIPGAMLGGLILGLVEMVGAVY--------------MSRYKDAIAFAVLIFILLLKPTG 279 Query: 339 LLRL 342 LL Sbjct: 280 LLGR 283 >gi|315444714|ref|YP_004077593.1| urea ABC transporter membrane protein [Mycobacterium sp. Spyr1] gi|315263017|gb|ADT99758.1| urea ABC transporter membrane protein [Mycobacterium sp. Spyr1] Length = 370 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 100/336 (29%), Gaps = 29/336 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L+ L + S+ + L + + A G+ + G G+L L + + +G Y Sbjct: 16 VAALVLFVLAPAILSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLGGYMM 75 Query: 82 VILGSRYGLSI---------------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + + L + S A +I + L + Sbjct: 76 AMHLKIADAQLRGDDVPDFMQIQGVRELPSYWTPFASPAVTLIAIVVIPTGIAVALGLGV 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 I + + A + V + FF F + +Y++ Sbjct: 136 FKRKVKGAYFAILSQALAAALAILLVGQTSLGGSNGLNRFRTFFGFTLNDPANRRMLYFI 195 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + L +++ L ++ +RD ++ L K+ A+AV++ F +AG Sbjct: 196 AAAVLLLVVAVVRQLMQSRYGELLVAVRDGEERVRFLGYDPANIKVVAYAVAALFASIAG 255 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A FA I+P +I + V +GG +L + L + Sbjct: 256 ALFAPIVGFIAPSQVGILPSIAFLIGVAIGGRATLLGPVLGAIGVAWAQTLFSERFPSAW 315 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + LV+ L L Sbjct: 316 TYGQ--------------GLLFILVVGFLPAGLAGL 337 >gi|171057771|ref|YP_001790120.1| urea ABC transporter permease UrtC [Leptothrix cholodnii SP-6] gi|170775216|gb|ACB33355.1| urea ABC transporter, permease protein UrtC [Leptothrix cholodnii SP-6] Length = 372 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 90/329 (27%), Gaps = 32/329 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 Y + +I+ Y + A + ++ G G+LSL + +A+G Y + Sbjct: 49 PLHFSDYYVQLTGKIMCYAICALAMDLIWGYTGILSLGHGLFFALGGYGMGMYLMRQIGL 108 Query: 87 ----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF--- 133 W +P S + M L L L Sbjct: 109 DGNYKSTLPDFMVFLDWKTLPWHWSFSESFFGQMLLVVLVPGLLALVFGFFAFRSRIKGV 168 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 +I + + + R P + + ++ + + Sbjct: 169 YFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFKRILDIPLAQPSTRMTLFMLTGVVLVG 228 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + + + IRD + + KLS + +S+ +AGA + Sbjct: 229 FFLMARAIVNSKYGRVLQAIRDAESRVMFTGYDPLAYKLSIWTLSAVMCAVAGALYVPQV 288 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I+P + +I + +GG +L + G F Sbjct: 289 GIINPGEMSPAASIEIAIWAAVGGRATLIGPILGAFFVNGAKSW--------------FT 334 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + V L H ++ L Sbjct: 335 QVFPEFWLYFLGALFIAVTLFLPHGIVGL 363 >gi|323357255|ref|YP_004223651.1| branched-chain amino acid ABC transporter permease [Microbacterium testaceum StLB037] gi|323273626|dbj|BAJ73771.1| ABC-type branched-chain amino acid transport system, permease component [Microbacterium testaceum StLB037] Length = 327 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 112/300 (37%), Gaps = 8/300 (2%) Query: 55 GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 GL+I G GLL++ +GAY + + + LI ++ ++ +P+ Sbjct: 28 GLNIHFGYTGLLNMGQAGFMLLGAYGFAVSVQAGLGFVPALIVALLVVLVYSFILG-VPT 86 Query: 115 LKFRGDYLAIATLIMSEIFQNI-----LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 LK RGDYLAI T+ +EI + + L +NG G D L Sbjct: 87 LKLRGDYLAIVTISAAEIIRMVGRSSVLGPITNGSNGIPGDRYRDPFNGLSFFGDGQTTI 146 Query: 170 FRFPSSFVIY-EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 + ++ V + + ++ L R+ + IR+++ A SL + Sbjct: 147 LWWTYDNTGVSGWWVRAVAWAVVAVLLVLVWLLIRSPWGRVLKGIREDEDAVRSLGKSAF 206 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 K+ A + G+AG + + PD S + + ++LGG ++ Sbjct: 207 SFKMQALILGGLIGGIAGIVYVMP-SSVQPDALGRSMTFFIWTALLLGGAATIFGPVLGA 265 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + V G+ + L+ IAL L+++ R +L + +F Sbjct: 266 ILFFVVRIFIQGVTRLIVPEGVWSGQQTEQFSWILIGIALMLLVIFRPQGILGNKKELSF 325 >gi|316935500|ref|YP_004110482.1| urea ABC transporter permease UrtC [Rhodopseudomonas palustris DX-1] gi|315603214|gb|ADU45749.1| urea ABC transporter, permease protein UrtC [Rhodopseudomonas palustris DX-1] Length = 383 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 103/347 (29%), Gaps = 36/347 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ + +L + + + ++ + L Y A GL + G G+LSL + + + Sbjct: 12 VIGLAALAVLLVVILPLSLDVFRLNLVAKYLTYAFVALGLVLCWGFGGILSLGQGVFFGL 71 Query: 77 GAYSYVILGS--------------------RYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 G Y + I L I+ + + Sbjct: 72 GGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQITQLPWFWQPFHSLTLTIVAILVVP 131 Query: 117 FRGDYLAIATLIMSEI--FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 YL A + + +I I + L + Sbjct: 132 TVFAYLIGAAMFKRRVGGVYFAIITQAIAAIMTILIIGQQGYTGGINGITDLRTLKGWDI 191 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 ++ +Y+V + F + L++R + +R+ + ++ K+ A Sbjct: 192 RPDHAKVVLYFVEVAFLFGCILLALFVRHAKLGRILVAMREKEDRVRFSGYSVANFKIFA 251 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F +++ F + GA F + +SP +I ++ +GG S+ T ++ Sbjct: 252 FCLAAMFAAIGGAMFTLNVGFMSPSFVGIVPSIEMVIYTAVGGRLSIFGAVYGTLLVNFA 311 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 SF + V+L+ + L Sbjct: 312 KTSLSE--------------SFPQLWLFGLGALFIAVVLIFPNGLAG 344 >gi|220921217|ref|YP_002496518.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219945823|gb|ACL56215.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 334 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 113/269 (42%), Gaps = 14/269 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ +++I+ + A L +V+G L+S IGAY+ IL + + + + Sbjct: 49 PFLVVTATRMMIFGLAALSLDLVLGYGALVSFGHAAFVGIGAYAVGILDAHGIRDLAVQV 108 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + ++ G SL+ RG Y + TL ++ ++ G G+ ++ R Sbjct: 109 PAALGACALFALVTGAISLRTRGVYFIMITLAFGQMAYFFMVSLAS-YGGDDGMALSRRS 167 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + + ++ +YY +L + + + + + R RDN Sbjct: 168 TLFGQPL-------------LEGDLPLYYAVLALLAAALVCLRRVVGSRFGRVLRGTRDN 214 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + +L+A+A++ A G+AG A + +SP + + +I +V+LG Sbjct: 215 ALRMEAIGFDALPYRLTAYAIAGALAGLAGILLANQAEFVSPAYMSWQRSGELIVMVVLG 274 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYY 305 GM +L A LI V E + ++ Sbjct: 275 GMGTLVGPVVGAAALIAVEEGLAHYSEHW 303 >gi|154486889|ref|ZP_02028296.1| hypothetical protein BIFADO_00722 [Bifidobacterium adolescentis L2-32] gi|154084752|gb|EDN83797.1| hypothetical protein BIFADO_00722 [Bifidobacterium adolescentis L2-32] Length = 309 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 104/304 (34%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G + L++ +G+Y ++ + + + L Sbjct: 13 IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYV--LMLTIPAIVAFGLPAW 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+I + ++ + + NG I+ AD Sbjct: 71 VAVIPAILMCVAVGVIVERAAYKPVREKGNSMTALITAIAMSLLLENGSQAIFGAD---- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 TV ++I+ + + ++ + ++ L++ T A R + ++++ Sbjct: 127 -YQTVPTIIQIPTLAIGKLKIDGATIITIVLGVIIMVALQLFVTYTKQGKAMRAVSEDKE 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +A + S ++S M + +LGG+ Sbjct: 186 ASILMGINVNSTITLTFAIGSGLAAVASLMYCVSYPQVS-PMMGAMLGLKAFVAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V L ++ S ++ L +V+L++ Sbjct: 245 GSIPGAMVGGLVIGVVESLTKAYIGTITGGVITSAFSDA-----IVFGILIIVLLVKPSG 299 Query: 339 LLRL 342 L+ Sbjct: 300 LMGE 303 >gi|167720835|ref|ZP_02404071.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei DM98] Length = 353 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I + V L+ A Y ++ +++ Y + A L +V G G+LSL + Sbjct: 10 IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 69 Query: 74 YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 +A+G Y+ + ++ L Sbjct: 70 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 129 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I Y + + R F + Sbjct: 130 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 189 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + S + + + IRD + L + + KL + Sbjct: 190 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 249 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ +AGA + I+P +I + V +GG +L + G Sbjct: 250 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 309 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F + + LV L+ ++ L Sbjct: 310 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 342 >gi|301064249|ref|ZP_07204692.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] gi|300441694|gb|EFK06016.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] Length = 311 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 121/323 (37%), Gaps = 33/323 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ ++ ++ + ILIY +FA L++V+G G+ N + + +GA Sbjct: 11 ILLLVGIILFLTFPLFVSRFYVYLTTVILIYGLFATSLNLVLGYGGIFQFNHAVFFGMGA 70 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y ++ +R LS W+ V ++S +I+GL ++ Y + + + + ++ Sbjct: 71 YGAALVITRSDLSPWIGFLVGPLVSALMSLIIGLICIRLSKLYFGMLQISLGSLIWAVVY 130 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W T G GI+ + YY L + L+ I Sbjct: 131 RWYGFTGGDDGIHGIPMP------------------DIISSSTNTYYFTLFIVSLAFFTI 172 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + ++ + + IRDN + + +L A S F G+AG F + + P Sbjct: 173 YKIIKSPFGSVIQGIRDNPIRSKMIGVDVPRHQLVAIVFSGFFAGIAGVLFVIVENAVFP 232 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 DM ++ ++ + + +LGGM + +++ + Y+ Sbjct: 233 DMLFWTLSLEAMIMCLLGGMYTFMGPIFGAMVIVLLRTSISTFTVYWG------------ 280 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + I L +I +L Sbjct: 281 ---LFLGIILMFIIFFLPDGVLG 300 >gi|170702904|ref|ZP_02893746.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|170132184|gb|EDT00670.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] Length = 295 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 57/308 (18%), Positives = 115/308 (37%), Gaps = 19/308 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 ++ + +Y A GL++ G GL++ + +GAY+ I S+ G ++ Sbjct: 2 SSFVIHLLTIGCLYATMALGLNLQAGYAGLVNFGFIAFAGLGAYAAGI-ASQLGWPLFSA 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + ++ +GA +++ + DY IATL ++EI + I + +T G GI Sbjct: 61 LALAVAAAGALALVVARLGRQLAADYWGIATLAIAEILRTIALNESWLTGGAQGIGGIAP 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L+ + + V G L+ + L + A + +R+ Sbjct: 121 LFPGLRAPWAD--------------LAFLAVTAGCLALTYATYRRLTASRFGRALKVMRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + K A + +AGA + PD SE + ++V++ Sbjct: 167 EPALAVCFGYDPLALKTRACIAGALPAAVAGALATWYIGYVGPDAMIASETFALWTVVMV 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S + + T I+ + + + + L L+ + L ++ R Sbjct: 227 GGLGSHAGVLVGTLIV----QAVYALAPFLKDWLGVGSDLTGAVRLGLVGLMLLACVIWR 282 Query: 336 SHSLLRLR 343 H L+ R Sbjct: 283 PHGLVPER 290 >gi|282862072|ref|ZP_06271135.1| inner-membrane translocator [Streptomyces sp. ACTE] gi|282563097|gb|EFB68636.1| inner-membrane translocator [Streptomyces sp. ACTE] Length = 309 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 92/305 (30%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ + IG + + + LL + Sbjct: 8 LANGLILGAMYGLIAIGYTMVYGIIQLINFAHGEIFMIGGFGALTVYLGLPSGFSLLAAI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 MI G + + R Y + LI ++ Sbjct: 68 PLMIVGGVICSVAVSVAAERFAYRPLR----GAPRLAPLITAIGLSLALQQAVWMWYPDA 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +VL+ ++ L++ +T + + Sbjct: 124 TKDRSFPQFKGEAIDLFGASIQRGDLFVLVAAPVCMLALGLFVSKTRAGRGMQATSQDPD 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + AFA+ +AF +A + +I M F + + +LGG+ Sbjct: 184 TAKLMGINTDRIIVMAFAIGAAFAAVAAVAYGLKNGQIGFRM-GFIMGLKAFTAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L L G L L LV+L+R Sbjct: 243 GNIYGAMLGGVVLGVAEALATGYMSDVPGMEL---FGGGAWKDVWAFALLILVLLIRPQG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|121592590|ref|YP_984486.1| inner-membrane translocator [Acidovorax sp. JS42] gi|120604670|gb|ABM40410.1| amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax sp. JS42] Length = 655 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 111/305 (36%), Gaps = 33/305 (10%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I I +FA L ++G GL S + +GAY +L + + Sbjct: 364 SYATVLLTDIAIAALFAASLHCILGPGGLHSFGHAAYFGLGAYGAALLVRWLDWPMGTAL 423 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++ A ++ G ++ G L + TL ++I I +W T G GI Sbjct: 424 LLGPLVAAAGALVYGWFCVRLSGVSLTMLTLAFAQITWAIAYQWDGFTGGSNGITGVWPP 483 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + Y+++L + ++ + + A R RD+ Sbjct: 484 QW------------------AAQGAGFYWLVLALAVAGIYLLRRMLFAPLGWALRAARDS 525 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + +AF + G+AGA + S+ ++PD S ++ + +V+LG Sbjct: 526 ALRADAIGIDVRGVQWAAFVAAGLLAGLAGALYVFSKGSVAPDALGVSRSVDGLVMVLLG 585 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM L+ + + + Y+ L+ + L++L+ Sbjct: 586 GMQQLAGPVVGAGVFTWLHDTVARSTDYWRA---------------LLGGIMLLLVLLFP 630 Query: 337 HSLLR 341 + Sbjct: 631 QGISG 635 Score = 52.9 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 96/306 (31%), Gaps = 17/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLI 96 + + + A GLS++ G + +++ Y +G Y L R G W + Sbjct: 30 LLNGLAGASTLFLVAAGLSLIFGVMRIVNFAHGSFYMLGLYLAYALVERLGEALGFWPAL 89 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G G + + L+ + L+ + ++ G ++ Sbjct: 90 LWAPLAVGLLGAAVEVLLLRRIYRAPELLQLLATFALVLVIKDAALWLWGPEELFGPRAP 149 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + + +++ + + L L RT R + Sbjct: 150 GLEGA----------VDLLGRRFPAYDLFLIAVGPLVLVLLTLLLTRTRWGTLVRAATQD 199 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + S FA+ + G+ GA +V++G Sbjct: 200 REMVGALGVNQAWLFTSVFALGALLAGLGGALQLPREPA--SLELDMLTIGAAFVVVVVG 257 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL A ++ EL + + + +F + + + V++ R Sbjct: 258 GMGSLPGAFVAALVIA---ELKAVCIWLGVVEVAGVEVAFPQLTLVVEFLVMAAVLIWRP 314 Query: 337 HSLLRL 342 L+ Sbjct: 315 WGLMGR 320 >gi|227533082|ref|ZP_03963131.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227189263|gb|EEI69330.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 288 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 97/307 (31%), Gaps = 25/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G + L++ Y +GA+ + S + Sbjct: 4 IINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYAINYLHFSFVPALLS 63 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ G+++ + + + IA LI + L G Sbjct: 64 AMVMAALSGVLIEYLAYRPLRNSPRIAALITAIGVSFFLENGMSFLFGAN---------- 113 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I + V +L L + +++T + A R + + + Sbjct: 114 -ARNFPQVITTKTYQILGVDVSNVQLLILFTSLVLMVMLQFIIKQTTMGKAMRAVAVDPE 172 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + FA+ SA G AG + I P M I ++GG+ Sbjct: 173 AAQLVGINPDHVISFTFALGSALAGAAGVMIGLYYNSIDPLM-GMVPGIKAFVAAVVGGI 231 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A ++ + + + + + L +++++ Sbjct: 232 GSVPGAAVGGFLIGLLETGVQAVG-------------LSAYKDAAVYLVLIIMLVVLPAG 278 Query: 339 LLRLRTP 345 L R Sbjct: 279 LFGKRQR 285 >gi|226944691|ref|YP_002799764.1| ABC-transporter permease [Azotobacter vinelandii DJ] gi|226719618|gb|ACO78789.1| Bacterial ABC-transporter, permease prtein [Azotobacter vinelandii DJ] Length = 304 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 85/304 (27%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIGLALLASFGLESFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + + I + Sbjct: 69 LIFGTLLFTVCVTGLYGWVIERIAYRPLRNSTRLAPLISAIGISLILQNYVQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F+ ++L+ A++ +R T + R + ++K Sbjct: 129 GIPTLLDGAFRLPIGEGFLQISYTKVFILVAAFAGMAALTWVIRCTRLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MAQILGIDTDRVISWVFVIGAAMAALAGLLITLNYGTFDFYA-GFVIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL IL G+ + + F L L+++ R Sbjct: 248 GSLPGAMLGGLILGVAEAQFSGIVNTDYKDVFSFS-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|294633204|ref|ZP_06711763.1| branched-chain amino acid ABC transporter permease [Streptomyces sp. e14] gi|292830985|gb|EFF89335.1| branched-chain amino acid ABC transporter permease [Streptomyces sp. e14] Length = 339 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 110/332 (33%), Gaps = 13/332 (3%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ +A L L L + L++ A G +++G GLLS Sbjct: 1 MLVVLFIAPYSALPLPGLLDGPIGSPGNLQLLALCLVFGALATGYDLLLGRTGLLSFGHA 60 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + +A GAY + GL L + + A ++G SL+ G ++ TL ++ Sbjct: 61 LYFAAGAYVTNTVMLEAGLPFALAALLGLLAGVALSALLGAVSLRVSGIGFSMVTLAFAQ 120 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 ++ + G A + + +Y++ L Sbjct: 121 AGSILVQRDPGGVTGGEEGRAAPADKMPAA------------LVGIDHTANLYWIALAYL 168 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + +++ W R+ W I++N++ L KL+AF ++ A + G + Sbjct: 169 VVVLAVVHWAVRSPTGRVWEGIKENERRVEILGLRPYGFKLTAFVLAGALAALGGIVYLL 228 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 +P + ++ +V+LGG + + + + L Sbjct: 229 LTGGATPQTTTSDFTLSLLVMVVLGGSGTRWGPMAGGILYTWADHRLGDLANSGAVAGLP 288 Query: 312 FDCSFNMRH-TTLMVIALFLVILMRSHSLLRL 342 + L+ VI + + RL Sbjct: 289 AVLRVPLSQPLFLLGALFVAVIYLLPGGMARL 320 >gi|240850651|ref|YP_002972051.1| high-affinity branched-chain amino acid transporter, permease protein [Bartonella grahamii as4aup] gi|240267774|gb|ACS51362.1| high-affinity branched-chain amino acid transporter, permease protein [Bartonella grahamii as4aup] Length = 352 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 116/339 (34%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K + V L+ FLF + Y + I I + A L+++ G G+ S Sbjct: 1 MAKSVTTVLSCISVLVLIGFLFYADSHFNDYTLRIINLIAINAILAISLNLIYGFTGMFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY IL ++ + I+ + + L A + Sbjct: 61 LGHAGFMAIGAYVCAILLLSPEQK--EMMWILEPIAEPLYHLQLPFFVAVVISGLCAAVV 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + + + G R+ T + + Y L Sbjct: 119 GLLIALPILRLGGDYLGIATLGFAEIIRIVITNATSLTNGSLGIKGIPQNATLWWNYGWL 178 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 ++ + N R IRD++ A ++ F + +F V + F G+ GA Sbjct: 179 AFTVLFIVLLLQ----SNTGNVLRAIRDDEIAAKTMGINAFFYRSFSFTVGAFFAGIGGA 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I P MF F ++ IV+ GG+ S++ + I+ ++E + + Sbjct: 235 LMAALISTIDPKMFNFLLTFNILMIVVAGGLGSITGSIIGSIIITVMLEWLRIIESPFDL 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + + L ++IL L+ R S Sbjct: 295 GFIHIP-ETPGLRMVVFSLLLLVIILFWRKGLMGQREFS 332 >gi|33592400|ref|NP_880044.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella pertussis Tohama I] gi|33597488|ref|NP_885131.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella parapertussis 12822] gi|33601884|ref|NP_889444.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella bronchiseptica RB50] gi|33572045|emb|CAE41572.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella pertussis Tohama I] gi|33573916|emb|CAE38232.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella parapertussis] gi|33576321|emb|CAE33400.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella bronchiseptica RB50] gi|332381816|gb|AEE66663.1| high-affinity branched-chain amino acid transport system, permease protein [Bordetella pertussis CS] Length = 308 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 101/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + IY + A G ++V G +G+++ Y IGAY ++ + Sbjct: 12 FFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTNSGLPLPF 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I ++ V+ ++G G + + + + LI + L W + G Sbjct: 72 IIAAMLVVAIFVTGVYGYSVERVAYRPVRGSPRLVALISAIGMSIFLQNWVALGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + V ++F S V +++ L ++ L+++ + + A Sbjct: 129 ----RDMAVPALVSGAVQFHMGSSFDVTVPYSRIMIIVVTVVLMVALTLFIKYSRMGRAS 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + L F + + + G A + +++ F I Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFVLGAMLAAVGGVLIAITIGKLN-PFIGFLAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAF-------------ALLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|110678817|ref|YP_681824.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] gi|109454933|gb|ABG31138.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] Length = 341 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 119/335 (35%), Gaps = 9/335 (2%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + +L + L+L L + KY + + ++ GL + +G+ L +L+ Sbjct: 7 QKRGVLGACMLAAILILIGVLATFFASKYQLRLIYSAYVNLIVVLGLQVFMGNSRLTNLS 66 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 IGAY+ I + + L ++ + + + Sbjct: 67 HSAFMGIGAYAAAISVTPVAMKQISLPDAPWGLNAFALDPLTSAIVAL--------LITG 118 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + F + + G +A + + F + F I ++F ++ Sbjct: 119 AIAFLVGIFIVRMTGTGATIATLAILVIVHSIFLYRTDIFKGNQAFFGIPQVFSLTSIVI 178 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + + I+ R + R D++ ++ ++ +L A+ +S + AG + Sbjct: 179 LAVVVVFIVRGFRESPWGVMLRASADDETGSAAMGVNVVRLRLIAWVLSGLILAGAGIAY 238 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A IS F F+ + ++++I GGM +++ T + +E+ + Sbjct: 239 AYFLGTISARPFYFNHVFLTLAMLIFGGMRTVTGAVLGTFAISFGLEVVRWLETGPVIVG 298 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + F + ++ + + L + +R ++ R Sbjct: 299 IDFPEVLGLSG-VMLGLVIVLTMALRPVGVMGDRE 332 >gi|226305053|ref|YP_002765011.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226184168|dbj|BAH32272.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 342 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 119/323 (36%), Gaps = 30/323 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ +++ L Y + Y + A G+ + G LS+ AIGA Sbjct: 31 ALITVVVVAAVLLWMGPSLYRQDLVFLAATYSLIALGMYVPFVLAGSLSMAYSAYAAIGA 90 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ ++ R GLS+W + A+ + A +++ L + K G YLA TL+ F++ LI Sbjct: 91 YAVALISVRTGLSMWWGWILGALAAAAVAVLLSLATQKLSGFYLAAVTLLFGIAFEHWLI 150 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 T G AGI + + + + + L A + Sbjct: 151 DGPSFTGGSAGISGVETVTMF---------------GWEPPRYALVVFAILFVCLIAVAV 195 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 LR++ + RDN+ S + A A+ +A G+ F S ++P Sbjct: 196 DRLRKSVWGLMLQAARDNRNVARSSGVNPAHLTVVALAIGAAIASTGGSLFTVSVQAVTP 255 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F S + I + I+GG S I++ V G Sbjct: 256 ETFTLSIVFLAIFMPIIGGRGSAWGAPLGALIVVIVTLNMPGYQGSGE------------ 303 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 L+ A+ +++++ ++ Sbjct: 304 ---LLLAGAVLVILIVAPGGVIG 323 >gi|126738982|ref|ZP_01754678.1| ABC transporter permease protein [Roseobacter sp. SK209-2-6] gi|126720163|gb|EBA16870.1| ABC transporter permease protein [Roseobacter sp. SK209-2-6] Length = 330 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 110/315 (34%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L A++ LL L + ++ ++ ++ I + GL+I +G GL+SL + Sbjct: 9 LINAALLASLLGVPLLAWQMDEPFVITLATKVAILALAGVGLNIALGLGGLVSLGHAAFF 68 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y+ IL + L ++ L ++ + + Sbjct: 69 GIGGYAMGILAAHAQNYEPLFTWPFLFEGSNQMPLIWLVAVVASALAALVIGALSLRTSG 128 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + G S+ P + I + + + ++ Sbjct: 129 VYFIMITLAFGQMLYYFAISWSAYGGEDGLSIWVRNEMPGLNTLDPIQFFAIAFAVLAMA 188 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L R+ A R + ++ T +L AF +S A G+AGA FA Sbjct: 189 LWFSARLARSPFGLALSASRQTAERVETVGLTPFKLRLVAFVISGAITGLAGALFADLNR 248 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP M + + ++ VILGG+ L A+ I + L G++ Y+ L Sbjct: 249 FVSPTMLSWHTSGEIMIFVILGGVGRLYAPLLGAAVYILLEHLLGGISEYWQIFLGLLLL 308 Query: 315 SFNMRHTTLMVIALF 329 + ++ + Sbjct: 309 IMVLFAKGGLIGLIA 323 >gi|118587880|ref|ZP_01545290.1| ABC transporter permease protein [Stappia aggregata IAM 12614] gi|118439502|gb|EAV46133.1| ABC transporter permease protein [Stappia aggregata IAM 12614] Length = 327 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 102/288 (35%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + F T + + ++ + +++ + A GL+I +G GL+SL + + +G Sbjct: 9 ALTLALFVAIPFWAITADEPFTITLMTRAVVFAIAAVGLNIALGLGGLVSLGHAVFFGLG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ IL L + ++ L ++ + ++ Sbjct: 69 GYAMGILAYHAQNYTPLTEWPFLIEGTKSMPLIWLVAVIVSSLAALVIGILSLRTAGVYF 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + G S+ FP + I Y + LG+ L Sbjct: 129 IMITLAFGQMFFFFAISWAEYGGEDGLSIYVRNGFPGLNTLDPIQFYGLCLGLLCLVLLF 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L + A R + + KL AF VS A G+AGA FA +S Sbjct: 189 AWRLSGSPFGLALNAARQVPVRVETAGLDPVRLKLVAFVVSGAITGLAGALFADLNRFVS 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 P MF + + ++ +I+GG+ L + + + ++ ++ Sbjct: 249 PTMFSWQTSGEIMIFIIIGGVGRLFGPVVGALVFVALEHWLGALSDFW 296 >gi|86609462|ref|YP_478224.1| urea ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558004|gb|ABD02961.1| urea ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 402 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 96/315 (30%), Gaps = 21/315 (6%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + ++ +L +F+ T + ++ + L + A G+ ++ G G+LSL Sbjct: 45 SSRKLLWEAGILIVLVLALIFVAPTVLSGFRLNLLGRFLALSIVALGIDLIWGYTGMLSL 104 Query: 69 NCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMISGACGMIMG 111 + +A+G Y+ + G W + A +I Sbjct: 105 GHGVFFALGGYALGMHLKLQLPEGQIPEFFSLYGVTELPWFWYPFYSFPFTAVAVVLIPA 164 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 L + + + RL + + F Sbjct: 165 LVAAALGYLVVRNRIRGVYFSILTQATTIIFF----NFFNGQQRLINGTNGLTNFQTLFG 220 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + +Y + L+ + WL IRD++ K Sbjct: 221 LDVNSSEMRFAVYVTTVLAVVLAYLLCRWLTSGLFGRILVAIRDDEPRVRFSGYDPTGFK 280 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 + FAVS+A G+AGA F ISP+ +I ++ V +GG SL ++ Sbjct: 281 VLVFAVSAALAGIAGALFTLQTGIISPNAMAVPFSIEMVIWVAVGGRASLVGAVLGALLV 340 Query: 292 IGVVELCCGMNFYYF 306 L + Sbjct: 341 NFAKSLLSENLPEIW 355 >gi|312111253|ref|YP_003989569.1| urea ABC transporter permease UrtC [Geobacillus sp. Y4.1MC1] gi|311216354|gb|ADP74958.1| urea ABC transporter, permease protein UrtC [Geobacillus sp. Y4.1MC1] Length = 357 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 106/335 (31%), Gaps = 27/335 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + + L LF ++ S+ + L + M A GLS++ G G+LSL + + +GAY Sbjct: 7 LYWLFFLALFAAPFYLTEFRLSLLGKFLCFAMIAIGLSLLWGHTGILSLGHGVYFGLGAY 66 Query: 80 SYVILG---SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + S G + P + L + Sbjct: 67 CMAMYLKLESAPGRLPDFMEWSGVNKLPWFWKPFEHPLFAMSAAIVIPVLLAAFLSYFTF 126 Query: 137 LIKWKPITNGKAGIYVA----------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + K + V + + F F S + +I +Y++ Sbjct: 127 KNRIKGVYFSLLSQAVVVVFVTLFIGKQEWTGGTNGLTNFSTVFGFSLSSPLTQIVLYWI 186 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + L WL + IRD + L K+ +++S+AF +AG Sbjct: 187 TVCLLLLIFLFSRWLTVSRFGRVLVAIRDGENRVRFLGFNPTTYKVFVYSLSAAFAALAG 246 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 F ISP M +I ++ V +GG +SL + Sbjct: 247 IMFVLQVGLISPAMMGIIPSIEMVLWVAVGGRSSLIGAVIGAIV--------------TN 292 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ F ++ + V++ + L Sbjct: 293 SAKSFFSENYPDIWLLFLGGLFIGVVMFLPNGLAG 327 >gi|254705580|ref|ZP_05167408.1| hypothetical protein BpinM_00781 [Brucella pinnipedialis M163/99/10] Length = 324 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 18 LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 73 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 74 GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 133 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 134 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 179 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 180 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 239 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 240 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 290 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 291 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 321 >gi|226305047|ref|YP_002765005.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226184162|dbj|BAH32266.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 368 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 106/350 (30%), Gaps = 20/350 (5%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MSI + + L A+V + L + S+ + L + + A G+ + Sbjct: 1 MSILNNSRIRVWGGFALAAIVLFAIAPAVL-----SDFRLSLLAKFLCFAIVAVGIGLAW 55 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---------------WLLIPVSAMISGA 105 G G+L+L + + IGAY + + L S Sbjct: 56 GRGGMLTLGQGVFFGIGAYVMAMHLKIADAELKGDAVPDFMSIAGKTELPGYWQPFASPF 115 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 + L L + I + + A + + + + Sbjct: 116 VAIFAILFLPGAVAFLLGLGVFKRRVKGAYFAILSQALAAAFAILLIGQQSIGGSNGLNR 175 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 FF F + + ++++ G+ S ++I L + +RD ++ L Sbjct: 176 FRTFFGFNLNDPANKQMLFFIAAGVLLASVALIRQLMNSRYGELLVAVRDQEERVRFLGY 235 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 KL A+ ++ G+AGA F ISP +I + V +GG +L Sbjct: 236 DPANIKLVAYVTAAFLAGIAGALFVPIVGIISPADVGIVPSIAFLIGVAIGGRATLLGPV 295 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 + + + V LF ++ R Sbjct: 296 LGAIGVAWAQSTFSEKLPSGWIYAQGLMFIVVVGFFPAGVAGLFALMRHR 345 >gi|169831550|ref|YP_001717532.1| inner-membrane translocator [Candidatus Desulforudis audaxviator MP104C] gi|169638394|gb|ACA59900.1| inner-membrane translocator [Candidatus Desulforudis audaxviator MP104C] Length = 294 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 97/307 (31%), Gaps = 23/307 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+Y + A G ++V G + L++ + +GA+ + + + L I V Sbjct: 8 VINGLQLGLVYALIALGYTMVYGIVRLINFAHGEVFMVGAFVGYFGFTNWNMPWPLAILV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I GM + + + I LI + + + + Sbjct: 68 AMIICACLGMTIERLAYRPLRYAPRIMALIAAIGVSFFIAHF---------CSLKFMFGP 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V+ + V + + + + + + RT + A RT+ + Sbjct: 119 NYRVVQRPFEEVYWSIGGVTISNIQLLIFVTVVIMLLGLQYLVYRTRLGAAMRTLSYDHD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + +A + G +A + +I + + +LGG+ Sbjct: 179 TARLMGVNVDRTISLTFGIGAALAAVGGVLYAIAYPQI-FTFMGIMPGLKAFTAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + I+ + ++ F L LV+L++ Sbjct: 238 GLIPGAMLGALIMGQAEVMTAAFISSQLRDMIAFS-------------ILILVLLIKPTG 284 Query: 339 LLRLRTP 345 +L P Sbjct: 285 ILGKTQP 291 >gi|254250989|ref|ZP_04944307.1| inner-membrane translocator [Burkholderia dolosa AUO158] gi|124893598|gb|EAY67478.1| inner-membrane translocator [Burkholderia dolosa AUO158] Length = 323 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 133/324 (41%), Gaps = 16/324 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+Y +LL L A Y + ++L + +FA ++++G GLLS + A Y Sbjct: 5 VLYGVLLAALLVAPFIGAYPVFVM-KVLTFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 63 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 G + L + + + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 64 VTGYSIQTLGATPELGVLAGTVAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 123 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ + R F + ++ +YYV+L + + + I+ Sbjct: 124 A--------------PFTHGEDGLQGVPRGRLFGIVDLSNDVALYYVVLAVIVAACAFIV 169 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + I++N+ SL KL AF +S+A G+AGA + Sbjct: 170 RIVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLS 229 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318 ++ + +V+ + ++GGM +L A+++ + + + + + + + + S Sbjct: 230 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 289 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 290 SATIVTGLIFIACVLAFRRGIVGE 313 >gi|116493834|ref|YP_805568.1| branched chain amino acid ABC transporter permease [Lactobacillus casei ATCC 334] gi|191637084|ref|YP_001986250.1| Branched-chain amino acid ABC transporter, permease protein [Lactobacillus casei BL23] gi|239629297|ref|ZP_04672328.1| branched-chain amino acid ABC-type transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065410|ref|YP_003787433.1| branched-chain amino acid ABC transporter permease [Lactobacillus casei str. Zhang] gi|116103984|gb|ABJ69126.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Lactobacillus casei ATCC 334] gi|190711386|emb|CAQ65392.1| Branched-chain amino acid ABC transporter, permease protein [Lactobacillus casei BL23] gi|239527983|gb|EEQ66984.1| branched-chain amino acid ABC-type transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300437817|gb|ADK17583.1| Branched-chain amino acid ABC-type transport system, permease component [Lactobacillus casei str. Zhang] gi|327381114|gb|AEA52590.1| Amino acid/amide ABC transporter membrane protein 1, HAAT family [Lactobacillus casei LC2W] gi|327384289|gb|AEA55763.1| Amino acid/amide ABC transporter membrane protein 1, HAAT family [Lactobacillus casei BD-II] Length = 292 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 97/307 (31%), Gaps = 25/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G + L++ Y +GA+ + S + Sbjct: 8 IINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYAINYLHFSFVPALLS 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ G+++ + + + IA LI + L G Sbjct: 68 AMVMAALSGVLIEYLAYRPLRNSPRIAALITAIGVSFFLENGMSFLFGAN---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I + V +L L + +++T + A R + + + Sbjct: 118 -ARNFPQVITTKTYQILGVDVSNVQLLILFTSLVLMVMLQFIIKQTTMGKAMRAVAVDPE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + FA+ SA G AG + I P M I ++GG+ Sbjct: 177 AAQLVGINPDHVISFTFALGSALAGAAGVMIGLYYNSIDPLM-GMVPGIKAFVAAVVGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A ++ + + + + + L +++++ Sbjct: 236 GSVPGAAVGGFLIGLLETGVQAVG-------------LSAYKDAAVYLVLIIMLVVLPAG 282 Query: 339 LLRLRTP 345 L R Sbjct: 283 LFGKRQR 289 >gi|83644113|ref|YP_432548.1| branched chain amino acid ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83632156|gb|ABC28123.1| Branched-chain amino acid ABC-type transport system, permease components [Hahella chejuensis KCTC 2396] Length = 308 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 90/304 (29%), Gaps = 15/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG Y + S + +P+ Sbjct: 12 LINGITIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGTYVAFMAISGMAMLGVEFLPL 71 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 +++ M++ I I + R Sbjct: 72 IFLVALLSSMLVSSSFGWAIERIAYRPLRGGNRLIPLISAIGMSIFLQSYVRLGQGSRDI 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + + F + + + L++ R+ + A R + + Sbjct: 132 AMSSQISGGWSFGPEDGFQTSLSYIQVLIFIVTVISMTVLTLFISRSRMGRACRAVAQDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L S F + +A +AG ++ M F + + +LGG Sbjct: 192 KMANLLGIDTNRVIASTFVIGAALAAVAGTLLGMYYGVVNV-MVGFIAGLKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL + + ++ F L L++L + Sbjct: 251 IGSIPGAMLGGIILGITESMTAAYFSTEYKDVVSF-------------ALLVLILLFKPT 297 Query: 338 SLLR 341 LL Sbjct: 298 GLLG 301 >gi|309781988|ref|ZP_07676718.1| ABC transporter, permease/ATP-binding protein [Ralstonia sp. 5_7_47FAA] gi|308919054|gb|EFP64721.1| ABC transporter, permease/ATP-binding protein [Ralstonia sp. 5_7_47FAA] Length = 444 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 113/338 (33%), Gaps = 8/338 (2%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + L ++ + L+ + L Q + ++ Q+ I ++FA ++++ Sbjct: 24 MKFKPVNLARW------MLWGTTALVMIVLPLIWPQGFAITLLSQMGIMIIFALSYNMLL 77 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G+LS + +GA+ V + ++ G + + ++ A I G G Sbjct: 78 GQSGMLSFGHAVYAGLGAFMAVHVLNKIGAM--QALGMGGPLAVALLPIAGGLGGALFGV 135 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 T S ++ + + D G + Sbjct: 136 IFGYVTTKKSGTTFAMITLGIGEMVFASALMFPDFFGGEGGVSTNRSIGDALLGVTFGPA 195 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 +YY++ C +S +++ +T + +RDN + + + +S+ Sbjct: 196 RQVYYLIAAWCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRFLVVILSAF 255 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G+AGA + + ++ + + V+ +GGM S + + G Sbjct: 256 FAGIAGALSCINFEIVTAENVSAVRSGSVLLAAFIGGMGSFFGPIIGAVLTVFFTVALSG 315 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + L F M + L + + + Sbjct: 316 ITKAWLLYLGLFFVLMVMYAPGGIASLLVIHLPILRRG 353 >gi|192289960|ref|YP_001990565.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192283709|gb|ACF00090.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 312 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 122/323 (37%), Gaps = 34/323 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ L + AT Q + I + I+ + A + + G G+LS+ +IGA Sbjct: 11 LLILIGALVVVTIATWGQPFWLDNSIIVAIFALMALSVGLAYGQAGVLSMATGAFASIGA 70 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + I+ +R GLS ++ + V+ ++ + L+ L++ATL++S + + + Sbjct: 71 FGTGIVTTRLGLSPYVGLVVALVVPPVLAWPLARAVLRLSPLPLSVATLLVSLVLEIAVR 130 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + +T G G+ RL S M+++ G ++ + Sbjct: 131 EGGDVTGGYIGLSGIPRL------------------SVAPSPQAMHFLAWGCVLVALLLY 172 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + L +AI A RT R + + + S FA S+A G+AG +A + P Sbjct: 173 INLMDSAIGRAVRTARHDALRATADGVGVPRLLSSVFASSAAIAGLAGWLYAHHLTYVGP 232 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 D +I V+ + ++GG + A L+ Sbjct: 233 DSMTTHMSIQVLLMAVVGGARTFLGPVVGAA----------------LLLLVTLFLPGAE 276 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + L V+++ + ++ Sbjct: 277 TQGMVFGAMLVFVLVVMPNGIVG 299 >gi|62317218|ref|YP_223071.1| branched-chain amino acid ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|83269200|ref|YP_418491.1| inner-membrane translocator [Brucella melitensis biovar Abortus 2308] gi|189022481|ref|YP_001932222.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus S19] gi|237816779|ref|ZP_04595771.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|254690724|ref|ZP_05153978.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus bv. 6 str. 870] gi|254695971|ref|ZP_05157799.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus bv. 3 str. Tulya] gi|254700157|ref|ZP_05161985.1| branched-chain amino acid ABC transporter, permease protein [Brucella suis bv. 5 str. 513] gi|254731949|ref|ZP_05190527.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus bv. 4 str. 292] gi|256255906|ref|ZP_05461442.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus bv. 9 str. C68] gi|260544455|ref|ZP_05820276.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260756296|ref|ZP_05868644.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870] gi|260759723|ref|ZP_05872071.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|260882119|ref|ZP_05893733.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68] gi|261216401|ref|ZP_05930682.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] gi|261750650|ref|ZP_05994359.1| inner-membrane translocator [Brucella suis bv. 5 str. 513] gi|297249267|ref|ZP_06932968.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|62197411|gb|AAX75710.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82939474|emb|CAJ12444.1| Bacterial inner-membrane translocator:Sodium:dicarboxylate symporter:Blood group Rhesus C/E and D polypeptide [Brucella melitensis biovar Abortus 2308] gi|189021055|gb|ACD73776.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus S19] gi|237787592|gb|EEP61808.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|260097726|gb|EEW81600.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260670041|gb|EEX56981.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|260676404|gb|EEX63225.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870] gi|260871647|gb|EEX78716.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68] gi|260918008|gb|EEX84869.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] gi|261740403|gb|EEY28329.1| inner-membrane translocator [Brucella suis bv. 5 str. 513] gi|297173136|gb|EFH32500.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] Length = 327 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 21 LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 76 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 77 GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 136 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 137 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 182 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 183 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 242 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 243 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 293 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 294 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 324 >gi|327438227|dbj|BAK14592.1| branched-chain amino acid ABC-type transport system, permease component [Solibacillus silvestris StLB046] Length = 291 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 99/288 (34%), Gaps = 12/288 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ + +GA+ +R+ ++++L + + Sbjct: 7 LVNGISLGSIYALIALGYTMVYGIIKLINFAHGDVFMLGAFIGFYAIARWEMNVFLALII 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+I+ + K + IA LI + ++ G + Sbjct: 67 AMILCAVIGVIIERVAYKRLRNATRIAALITAIGVSLLIEYTVIFFRGPSPEAYP----- 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S+ ++L FL + + +T I A R + + Sbjct: 122 ------SVFATKNIEIFGAQISTLAIFILSVSIFLMILLQFIVHKTKIGKAMRAVSHDAD 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + FA+ SA G AG F RI P M I +LGG+ Sbjct: 176 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYTRIDPLM-GIMPGIKAFIAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + +L V + + + + F + I Sbjct: 235 GIIPGAMVGGLVLGVVETVVSALGYSLWRDAAAFVILILILILRPAGI 282 >gi|330807293|ref|YP_004351755.1| amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375401|gb|AEA66751.1| Putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 498 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ + I +I+ + Sbjct: 225 ITFGLLGVINMAHGEMLMLGAYSTYVVQMLFQRFAPNAIEFYPLIALPVAFFITAAIGMA 284 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + + + + + Sbjct: 285 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRLVFGAQNVEVANPAWLSGGIQVLPNL 342 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 343 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 402 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 403 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVFAAFGLGIANKI 460 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 461 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 495 >gi|288572908|ref|ZP_06391265.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568649|gb|EFC90206.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] Length = 297 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 102/305 (33%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G ++V G L L++ + +GAY GS + L + + Sbjct: 10 FFNALTLGSLYALIAIGYTMVYGILRLINFAHGEIFMLGAYFIFYTGSLFNLPWVVGAVI 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ CG+++ + K D I+ LI S ++ + V +F Sbjct: 70 SIVLCALCGIMVDKVAYKPLRDAPRISALISSIGMSFLIQNLAIVVFSGIPKPVVRPDFF 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V V V + L ++ + +T A R I + + Sbjct: 130 VKIMV----------IKGVRILPLAVIVPVVCFVLVLGLLFIVYKTKPGLAMRAISKDIE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + ++ F + SA +G +A +I P M F I ++GG+ Sbjct: 180 TTRLMGVSVNRIIALTFGLGSALAAASGIMWALRYPQIQPLM-GFMPGIKAFIAAVVGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL V + F I L +++L + Sbjct: 239 GSIHGAVIGGLILGFVEIMTVAFFPELSGFKDAFA-----------FILLIVILLAKPTG 287 Query: 339 LLRLR 343 L+ + Sbjct: 288 LMGEK 292 >gi|217959438|ref|YP_002337988.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|222095581|ref|YP_002529638.1| branched chain amino acid ABC transporter , permease [Bacillus cereus Q1] gi|229138662|ref|ZP_04267244.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus BDRD-ST26] gi|217066953|gb|ACJ81203.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|221239639|gb|ACM12349.1| branched chain amino acid ABC transporter, permease [Bacillus cereus Q1] gi|228644781|gb|EEL01031.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus BDRD-ST26] Length = 333 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 127/325 (39%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + + + + IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFLIGLVAAIFISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T ++ + +V+L+ L+ Sbjct: 287 ERWTIILGVLYIIVLLVFPKGLVGT 311 >gi|152981595|ref|YP_001351787.1| ABC-type branched-chain amino acid transport system, permease component [Janthinobacterium sp. Marseille] gi|151281672|gb|ABR90082.1| ABC-type branched-chain amino acid transport system, permease component [Janthinobacterium sp. Marseille] Length = 343 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 22/324 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++ L + +Y ++ I Y + G +++ G GLLS + AIG Sbjct: 30 LIAGGVVVALLAIAPLFVSQYYMTLLIPFFAYAVILLGFNLLFGYGGLLSFGHALFIAIG 89 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ + ++ G+ + ++ ++A+++ I + + + Sbjct: 90 AYAAAAMVAKTGMISFEMMLLTAVVASFIISIPIAWLASRFTGIFFGMLTLSFGMLFHSF 149 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + G R G + + YY L M L + Sbjct: 150 LNKFYYITGGDSGMRVPRPSLFGMELDQFDK-------TAFLGGPFYYYCLVMVLLLTWV 202 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + R+ RDN L I + AF VS+ + + G + Sbjct: 203 MWRIVRSPYGIHLMASRDNAIKALYLGVKIRSVRAIAFVVSAVYASIGGVILGVNTGLAD 262 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P++ ++ + ++ + +LGG + I + + + Y+ Sbjct: 263 PELAYWTHSGHLVFMAVLGGYQEFLGPVLGAFVFILLQDELSSLTQYW------------ 310 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + L +++++ ++ Sbjct: 311 ---RFFLGAILAILVVVLPGGIMG 331 >gi|30911169|gb|AAP41937.1| BraD [Rhizobium leguminosarum bv. trifolii] Length = 313 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 95/304 (31%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +G ++ +I+ L Sbjct: 21 LLNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFFVLTSIFAGLPVA 80 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++ ++ + + +A L S ++ I V Sbjct: 81 VLLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSITLSNFIQVTQGPRN 140 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +++ L + RTA+ A R ++K Sbjct: 141 KPI---PPMVSSVYQFGNISVSLKQIIIIVITAVLLTIFWYIVNRTALGRAQRATEQDRK 197 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + S + F+ + + +LGG+ Sbjct: 198 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASFND-GFTPGVKAFTAAVLGGI 256 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L V++ + Sbjct: 257 GSLPGAVFGGLLIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 303 Query: 339 LLRL 342 +L Sbjct: 304 ILGR 307 >gi|170780971|ref|YP_001709303.1| putative integral membrane transport protein [Clavibacter michiganensis subsp. sepedonicus] gi|169155539|emb|CAQ00651.1| putative integral membrane transport protein [Clavibacter michiganensis subsp. sepedonicus] Length = 466 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 97/290 (33%), Gaps = 27/290 (9%) Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL- 115 S++ G+ GL + GA + + GL+ L I ++ ++ GA G + Sbjct: 201 SLIYGTTGLNNFAHGELVTFGALMAYLFSNVLGLNPVLAIIITVVLGGAFGFVQDAAIWK 260 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 R L + L++ I ++ +++ A V + F Sbjct: 261 PLRRRRLGLVPLMIVTIGLSLALRYTFQFIFGADRLTLPNSSAPFLVVGPVSLKFTDVVG 320 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 ++ + + ++ L T I A R + DN+ + + + Sbjct: 321 AIVSIVLL-----------VAVAYVLLYTKIGKATRAVSDNRSLAAASGIDVEGVIRVVW 369 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +A ++G F A + S ++V S V+LGG+ + + ++ + Sbjct: 370 IGGAALAALSGVFIAYYQSL--RWDTGASILLLVFSAVVLGGLGTAFGALIGSIVIGVFI 427 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + ++ + +++L+R +L + Sbjct: 428 NVSTMVLP-------------ENMKYVAALVVMIVILLVRPQGILGRKDR 464 >gi|167895524|ref|ZP_02482926.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167912170|ref|ZP_02499261.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 112] Length = 330 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 88/330 (26%), Gaps = 32/330 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------ 84 A Y ++ +++ Y + A L +V G G+LSL + +A+G Y+ + Sbjct: 4 SAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLFFALGGYAIGMYLMRAIG 63 Query: 85 ------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 ++ L + + Sbjct: 64 RDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPAALAWVFGFFTFRSRVKG 123 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +I Y + + R F + + Sbjct: 124 VYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAITSPGTRTVLLLTTFAALV 183 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S + + + IRD + L + + KL + VS+ +AGA + Sbjct: 184 ASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVWVVSAVLCAIAGALYVPQ 243 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P +I + V +GG +L + G + Sbjct: 244 VGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAKSVFTAY----------- 292 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + LV L+ ++ L Sbjct: 293 ---FAEYWLFFLGLIFVLVPLVLPRGIMGL 319 >gi|119900108|ref|YP_935321.1| putative branched-chain amino acid transport permease [Azoarcus sp. BH72] gi|119672521|emb|CAL96435.1| putative branched-chain amino acid transport permease [Azoarcus sp. BH72] Length = 315 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 124/315 (39%), Gaps = 20/315 (6%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 F A+ S Y ++ Y + GL IVVG G ++L A+GAY+ +L +R Sbjct: 21 FGYASASPDYALGQATLVITYAIAGLGLVIVVGHGGQIALGHGALVALGAYTQALLVARG 80 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + L +P++ GA G + LP+ + G Y I+TL + + + L++W+ +T G A Sbjct: 81 LPPL-LALPLAMAAGGAGGALASLPARRLGGLYFGISTLAFALLVEEALVRWESLTRGSA 139 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 G+ VA V + L+ + L + I Sbjct: 140 GLGVAAFSVGGW---------------SATAPAAQLGVSAVLLALAWAGCRRLLASRIGR 184 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 AWR +R+++ A + + AF A G+ GA +A +SP+ F + Sbjct: 185 AWRALREDEMAAQACGIAAGPSIALAFTAGGALAGLGGALYAHWIGYLSPEQFGLRFSFE 244 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 ++ +V +GG L+ +++ + +L L T L + Sbjct: 245 LLMLVFIGGARRLAGALWGALVIVALPQLIALARDALPGDTL----RSAGVETLLFGALI 300 Query: 329 FLVILMRSHSLLRLR 343 +L+R L R Sbjct: 301 VAAVLLRPQGLAGGR 315 >gi|66047654|ref|YP_237495.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] gi|63258361|gb|AAY39457.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] Length = 529 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|33596807|ref|NP_884450.1| ABC transporter [Bordetella parapertussis 12822] gi|33600579|ref|NP_888139.1| ABC transporter [Bordetella bronchiseptica RB50] gi|33568178|emb|CAE32091.1| Putative ABC transport system, membrane protein [Bordetella bronchiseptica RB50] gi|33573508|emb|CAE37497.1| Putative ABC transport system, membrane protein [Bordetella parapertussis] Length = 333 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 119/279 (42%), Gaps = 13/279 (4%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y + +ILI+ +FA L+++VG GL+SL + + Y+ + LG G+S W Sbjct: 24 SDYTLGLISEILIFAIFAMSLNLLVGYTGLMSLGHAAFFGMSTYTVIALGVHLGISGWWG 83 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I ++ A ++G+ ++ G + T+ S++ +KW+ ++ G G+ R Sbjct: 84 ILAGVAMATALAAVIGVFCIRVSGIPFLMLTMAFSQLLYAASLKWRSLSGGSDGLVGFVR 143 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 G ++ + + ++ L R+ + + + IRD Sbjct: 144 PALFGVSLSESAVARYAVVAVGFALVLVFLWCLV-------------RSPLGSIFIGIRD 190 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N++ ++ + KL +F ++ G+AGA +A +S D+ + + V+ ++IL Sbjct: 191 NEQRMRAIGYPVQRFKLLSFIIAGFLAGVAGALYALFNAYVSTDILHWHLSGDVMIMMIL 250 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 GG ++ A A+ + + N Y+ + Sbjct: 251 GGSGTVLGPAIGAALFLLLKNFIGSYNDYWSFWVGAVFI 289 >gi|222833000|gb|EEE71477.1| hypothetical protein POPTRDRAFT_588835 [Populus trichocarpa] Length = 488 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 91/309 (29%), Gaps = 36/309 (11%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL----- 112 +V G G+LSL + + +G Y+ + S L Sbjct: 1 MVWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPISTKIQSTPGIPDFMDWNQLTELPS 60 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA-----------------DR 155 L F+ ++A +I LI + G+Y A Sbjct: 61 FWLPFKSLPFSLAAVIAVPTLLAWLISFAMFKRRVGGVYFAIITQAVALIVTVLIIGQQG 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + L + + + + +YYV + + + + W++ + +RD Sbjct: 121 YTGGVNGMTDLKTLWGWDTRTDSAKYILYYVCVALLIGAIVLCRWIQTGKVGTLLLAMRD 180 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + K+ F +++A G+ GA F +SP +I ++ + Sbjct: 181 KEDRVRFSGYDVANFKVFVFCLAAALSGIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAV 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG SL T ++ F SF LM V + Sbjct: 241 GGRMSLVGAVYGTLLVNAGKTY--------------FSESFPDLWLFLMAGLFIGVTMAF 286 Query: 336 SHSLLRLRT 344 L L Sbjct: 287 PMGLAGLWE 295 >gi|163758516|ref|ZP_02165604.1| branched-chain amino acid ABC transporter, permease protein [Hoeflea phototrophica DFL-43] gi|162284805|gb|EDQ35088.1| branched-chain amino acid ABC transporter, permease protein [Hoeflea phototrophica DFL-43] Length = 314 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/327 (16%), Positives = 116/327 (35%), Gaps = 28/327 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + ++ L Y + ++++ ++A G +++ G GLLSL + ++ G Sbjct: 9 VLHIAIIAALAASFFVLPDYHVGVLARVMVLAVYAIGYNMLFGYTGLLSLGHALFFSAGM 68 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y + + + GL L + + A+ + +I+G +L+ + I TL+ ++ ++ Sbjct: 69 YGFALAVNHGGLPTGLALLLGALAAFLTSLIIGFLALRTKEVAFMIVTLMFAQAGYLTVL 128 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + +T G G + E ++ L + L Sbjct: 129 YFGAVTRGDEG-------------FVLSTAQRTLAGIDLSGEATRFWAALILFSLCLLGT 175 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ + A +R+N++ L KL A VS G+ GA +A + Sbjct: 176 AALVKSRLGRAMIAVRENEERARMLGYDTHRLKLIAILVSGTLSGIGGAAYALLFGYVGA 235 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +I + V+LGG + + +++L + Sbjct: 236 TFATVQYSIFPLLWVLLGGAGTTIGPLIGVLFMFYLIDLSSSV---------------TD 280 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 + + +AL L+ L L+ Sbjct: 281 AYMLIAGLALVLLCLFAPQGLVGEIRR 307 >gi|124265892|ref|YP_001019896.1| putative permease transporter transmembrane protein [Methylibium petroleiphilum PM1] gi|124258667|gb|ABM93661.1| putative permease transporter transmembrane protein [Methylibium petroleiphilum PM1] Length = 378 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 89/329 (27%), Gaps = 32/329 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---- 86 A Y ++ +I+ Y + A + ++ G G+LSL + +A+G Y+ + Sbjct: 49 SAFHLSDYAVALIGKIMCYAICALAMDLIWGYTGILSLGHGLFFALGGYAMGMYLMRQIG 108 Query: 87 -----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF-- 133 W +P S + + L Sbjct: 109 RDGNYQSDLPDFMVFLDWKELPWHWSFSDSFVATLFLIVAVPGLLAFVFGFFAFRSRIKG 168 Query: 134 -QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 +I + + + R P + + ++ + Sbjct: 169 VYFSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRILSIPIAQPSTRMVLFVLTGLTLI 228 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + WL T + IRD + + KL+ + +S+ G+AGA + Sbjct: 229 GFFLLARWLIHTKFGRVLQAIRDAENRVMFCGYEPLNYKLAIWTLSAVMCGIAGALYVPQ 288 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P + +I + +GG +L + F Sbjct: 289 VGIINPGEMSPAASIEIAIWAAVGGRATLIGPIVGAFFVNFAKSW--------------F 334 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F + V L ++ Sbjct: 335 TQVFPEFWLYFLGALFIAVTLFLPDGIVG 363 >gi|311107305|ref|YP_003980158.1| high-affinity branched-chain amino acid transport system permease BraD 2 [Achromobacter xylosoxidans A8] gi|310761994|gb|ADP17443.1| high-affinity branched-chain amino acid transport system permease protein BraD 2 [Achromobacter xylosoxidans A8] Length = 309 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 93/305 (30%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +GL++ IGA + + Sbjct: 8 LINGVTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATTIAISLVGGDP--STS 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G ++ + +A + + + + Sbjct: 66 AFVVLGVGLLVSVPLCMAVGWTAERVAYRPLRRAPRLAALITAIGVSIILQNVAMMGWGR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ F + +++ + ++ + +T + A R N++ Sbjct: 126 NYLNFPQVLSPQVFEIAGARMSSLQIAIVVIAALIMGGLLAVVHKTRLGTAMRATAQNRE 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I +AF + SA +AG A +S F + + +LGG+ Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAVAGMMVATYYG-VSQYTMGFMLGLKAFTAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G L + L LV++ R Sbjct: 245 GNLVGAMAGGLLLGIIESLGAGYIGDLTGGFLG-----SHYQDVFAFFVLVLVLIFRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|126462705|ref|YP_001043819.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] gi|126104369|gb|ABN77047.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] Length = 410 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 98/353 (27%), Gaps = 36/353 (10%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L G + L + A + +V G G+LSL + +A+G Y + Sbjct: 28 LASHAYGTAFLSTSFVKTLGKTLCLCLVALAMDLVWGYAGILSLGHMAFFALGGYMIGMW 87 Query: 85 GSRYGLSIWLL-------------------------------IPVSAMISGACGMIMGLP 113 ++ +P + + + + L Sbjct: 88 LMYARTEDIVVQALSKAPLPATPQEISDGVASQIFGVVGGAELPAVWAFAHSLPLQLALV 147 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L L L + + A + L P Sbjct: 148 VLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALALHLFQNDAGLRGNNGLSGLQNIP 207 Query: 174 SSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + ++ ++ G L + W+ + R IRD+++ L ++ Sbjct: 208 GLVQVSQDRLSVWFFWASAGALALGYLLAAWIVSGKFGSVLRAIRDDEQRVRFLGYSVES 267 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL F +++ +AGA + I+P +I + V +GG L A Sbjct: 268 YKLFIFTLTAVIAAVAGALYYPQAGIINPAELAPIASIYLAVWVAIGGRGRLYGAVIGAA 327 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + G + + L+ +A LV L + L Sbjct: 328 FVSLLSTWFTGGRAPDLSLGFA-TIQWVDWWQILLGLAFVLVTLFAPQGIGGL 379 >gi|312199055|ref|YP_004019116.1| ABC transporter [Frankia sp. EuI1c] gi|311230391|gb|ADP83246.1| ABC transporter related protein [Frankia sp. EuI1c] Length = 939 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 110/298 (36%), Gaps = 16/298 (5%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++ L A + + + Q L + ++V G G++SL GA++ Sbjct: 345 IAVVGLLAYTAWGATDFWAGLLAQGLATAIVLLSFTVVTGIGGMVSLAQAAFVLSGAFTA 404 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 IL + ++S G+++ LP+ + G LA++TL ++ I +N+L + Sbjct: 405 GILLGHGVP-FVPALIAGTLVSAFVGLVVALPTRRLGGLPLALSTLALAFIGENLLFQIH 463 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 I+NG +G V R ++ +L+ + L ++ L Sbjct: 464 SISNGSSGWPVTPP---------------RIGGLDTSNPRWLVLLLVLLVGLGVWVVHAL 508 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R ++ A +R ++ + + KL F +S+ G G AA+ R++ F Sbjct: 509 RSSSTGRAMLAVRSSEVGARTSGIAVDRMKLLLFVISAGIAGFGGVMLAAAHGRVTRTDF 568 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 ++ ++ + + + A + ++ + + + F Sbjct: 569 TVLLGLVWLATTVTLSIRRPAGAVLAGLVSALAPQVLEHVPASTYFMQMVFGLGAISL 626 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 77/302 (25%), Gaps = 19/302 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAM 101 + +Y + A GL++ + G+ + AY + + + + I + Sbjct: 12 LVTGALYAILASGLTLSYQTSGVFNFGQGGVAFSTAYLFFQLNTGQKLPVVVSAIICIGI 71 Query: 102 ISGACGMIMGLPSLKFRGDYLAIAT-------LIMSEIFQNILIKWKPITNGKAGIYVAD 154 + G ++ L + A LI ++ + + Sbjct: 72 FAPLLGWVLHLVLFNPLRESSIAAKMVASLGLLIALPSLGLWIVALLKDWLNLSSCSQQN 131 Query: 155 RLYFLGTTVRSLIRFFRFPSSF---------VIYEIFMYYVLLGMCFLSASIILWLRRTA 205 + + R S +I + +L F + + +R T Sbjct: 132 PKARCVPEIEDVFRIPGLGPSPKKIHSIGNGLIIDSDQLSMLGAAVFAAVLLWYLVRHTR 191 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 I R A ++ S G+ G A S Sbjct: 192 IGLEMRAAVSRPNLAALRGVDPDRASAVSWITSCGLAGLVGVLLAPMFGLSSFSYTTLL- 250 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 I I V+LG M S+ +L V L G + + Sbjct: 251 -FISIPAVVLGRMASIPIAMLGGLLLGVVQNLVNGYVTLDITGFPTAVPFIILFGLLIYF 309 Query: 326 IA 327 A Sbjct: 310 GA 311 >gi|222086814|ref|YP_002545348.1| urea or short-chain amide ABC transporter [Agrobacterium radiobacter K84] gi|221724262|gb|ACM27418.1| urea or short-chain amide ABC transporter [Agrobacterium radiobacter K84] Length = 386 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 101/344 (29%), Gaps = 33/344 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 V LL A Y+ S+ + L Y + A L +V G G+LSL +A+G Sbjct: 26 FLVPLSNLLLPETSALHVPTYLMSLFGKYLTYALLALALDLVWGYCGILSLGHGAFFALG 85 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ + R + LP + D+ A +++ + Sbjct: 86 GYAMGMYLMRQIGTRGTYGNPILPDFMVFLNWKELPWFWYGFDHFWFAMIMVLAAPGLLA 145 Query: 138 IKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 + + D + + F Sbjct: 146 FIFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFNIQADG 205 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 ++ + + L+ + + R+ +RD + L + KL F VS Sbjct: 206 TRATLFAITALLLALALMLSSAIVRSKFGKVLVGVRDAESRTRFLGYRVEHMKLFVFVVS 265 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + G+AGA + I+P F + +I V+ +GG +L ++ G + Sbjct: 266 AMMAGIAGALYVPQIGIINPGEFAPANSIEVVIWTAVGGRATLIGPIIGAILVNGGKTIF 325 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G+ F + V L ++ Sbjct: 326 TGL--------------FPSFWLFALGGLFVAVTLFLPKGIVGT 355 >gi|194288819|ref|YP_002004726.1| branched-chain amino acid ABC transporter permease [Cupriavidus taiwanensis LMG 19424] gi|193222654|emb|CAQ68657.1| putative branched-chain amino acid transport system permease, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 329 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 114/308 (37%), Gaps = 29/308 (9%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 ++ + I + G+ +++G G+++L Y IGAY+ + G Sbjct: 25 LLSRHHIDLLNFAAILAVGGLGVGLLLGQCGIVNLAQASFYGIGAYASAYCTTVLGWPAL 84 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + S A +GLP L+ G +LA+ATL + I + +W +T G GI Sbjct: 85 AGAAAGLLASAALAAAIGLPVLRLGGFFLALATLAVGSIANVLFFEWDWLTGGTLGIGGI 144 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 +L G + + R YY + L ++ L R A R + Sbjct: 145 PKLSLFGFLLDTPER--------------YYYFAWPLVALLLWLVDNLVRGRPGLAMRAM 190 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 RD A L + K + F +S+ +AG+ FA +S F +I+ + + Sbjct: 191 RDAAPAAQVLGIDMHRLKTAMFVLSAMLGSLAGSLFAHYVSFVSVQSFTVERSIVFLLVP 250 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++ G S + + V EL G+ + H L L LV+ Sbjct: 251 VVAGARSTYGVVIGALFVSLVPELLSGLGDF---------------HQVLFGAVLVLVVT 295 Query: 334 MRSHSLLR 341 + ++ Sbjct: 296 LMPGGIMG 303 >gi|295696319|ref|YP_003589557.1| inner-membrane translocator [Bacillus tusciae DSM 2912] gi|295411921|gb|ADG06413.1| inner-membrane translocator [Bacillus tusciae DSM 2912] Length = 292 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 88/275 (32%), Gaps = 12/275 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ + +GA+ + + L + V Sbjct: 8 LVNGLSVGSIYALIALGYTMVYGIIKLINFAHGDVFMVGAFVAYFSYTVFHLGFLGSLIV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S G+++ + + IA LI + L I G L Sbjct: 68 SMAACAVLGVVIERFAYRPLRKSTRIAALITAIGVSLFLENAGIIAVGAQARGYPSMLPN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + +++ L + + RT + A R + + + Sbjct: 128 S-----------SINLGGVTISVQQIGIIVLSVVLMVILQFIVHRTKMGKAMRAVAYDAE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG + A I P M + +LGG+ Sbjct: 177 AAQLMGIDVDRTISFTFAIGSALAAAAGVIYGAYYSAIDPLM-GIMPGLKAFIAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + +L + L + F + + F Sbjct: 236 GVIPGAMVGGLVLGMIETLVQSLGFSLWRDAVAFA 270 >gi|144898540|emb|CAM75404.1| Branched-chain amino acid ABC-type transport system, permease components [Magnetospirillum gryphiswaldense MSR-1] Length = 304 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 101/312 (32%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--------SYVILGSRYGL 90 + + IY + A G ++V G + +++ Y +GA+ + I G+ L Sbjct: 8 LINGLTLGAIYGLIAIGYTMVYGIIRMINFAHGEIYMLGAFISLIAFLTATTIGGTSVAL 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + L + + +++ G + + + + +A LI + +L + +T G Sbjct: 68 GLILALMSTMILTALWGWAVERVAYRPLRNAPKLAPLISAIGMSIVLQNFSQLTQGARVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + I R S V ++ L A + RT++ A Sbjct: 128 PLPPL-------FKGGIEILRGDSFTVSLSYLQMVIIALTVALMAVFTWIITRTSLGRAQ 180 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + K L + F + + +AG I F I Sbjct: 181 RATEQDMKMAALLGVNTDRIISATFVMGATLAAVAGLMVTLYYGVIDFY-IGFLAGIKAF 239 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL ++ + G + + F L L Sbjct: 240 TAAVLGGIGSLPGAMLGGLLIGLIEAFWSGYFSIEYKDVAAFS-------------ILVL 286 Query: 331 VILMRSHSLLRL 342 V+L R LL Sbjct: 287 VLLFRPTGLLGR 298 >gi|145588199|ref|YP_001154796.1| inner-membrane translocator [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046605|gb|ABP33232.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 318 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 119/301 (39%), Gaps = 15/301 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++IL + +FA ++++G GLLS + Y L G+ I + + Sbjct: 27 FLMKILSFALFAAAFNLLLGYTGLLSFGHAAFFGGAGYCAGYLMRDMGVGPAAGIAIGVL 86 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + A G ++G +++ +G Y ++ TL ++++F I ++ Sbjct: 87 FAAALGALIGGLAIRRQGIYFSMITLALAQMFYFICLQA--------------PASGGED 132 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + + R F + ++ +YY +L + I + + + I++N+ Sbjct: 133 GFQGIPRGDLFGLIDLQNDLNLYYFVLAITVAGFVFIQRIITSPFGQVLKAIKENEPRAI 192 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + K F +S+A G+AG+ A + ++ + +VI + ++GG+ ++ Sbjct: 193 SLGYKVNRFKFLVFVLSAALAGLAGSTQALVLGFETLTDVHWTMSGLVILMTLVGGVGTM 252 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + +++ + + + + + + S T + + ++ L+ Sbjct: 253 AGPFVGALVIVLLEHRVGEIGNFLAEITSIAWFNSLGESVTIVTGLIFIFCVMAFRRGLV 312 Query: 341 R 341 Sbjct: 313 G 313 >gi|311105872|ref|YP_003978725.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310760561|gb|ADP16010.1| inner-membrane translocator 32 [Achromobacter xylosoxidans A8] Length = 323 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 122/328 (37%), Gaps = 29/328 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL + A + + + L + + +I+ G G LS + + + Sbjct: 5 LLTIALFGAALAAAAALMNSGVALTFVMMSLYAALLSQAWNILGGYGGQLSFGHALFFGV 64 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134 GAY+ + G++ WL++P++ + G+ +G + + +G Y A+ TL +E+F+ Sbjct: 65 GAYAQALGQLNLGINPWLVLPMAIALGALVGLAVGGLTFRYGLKGSYFALVTLAFAEVFR 124 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + G + + Y+LLG L+ Sbjct: 125 ILALSVSFTGGGVGLMVPLQ---------------EGVANMQFGSRRGYIYLLLGFVLLA 169 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + WLR + + +RDN+ A ++ + KL A+S+AF+ AGAF+ Sbjct: 170 LVVTAWLRHSRFGAYLQAVRDNEDAARAIGVNPLRVKLGGIALSAAFVSAAGAFYVQVFQ 229 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I P F + ++ + I+GG+ +L L + +L + Sbjct: 230 YIDPGIAFGSAVSVEALVGAIVGGLGTLWGPVLGAVTLHALSDLTRNLFG---------- 279 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + L ++++ + Sbjct: 280 -ELPGISMVIYGVVLIVIVMFLPRGITG 306 >gi|167582852|ref|ZP_02375726.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|167620993|ref|ZP_02389624.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia thailandensis Bt4] Length = 325 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 123/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + M Sbjct: 27 FMMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTTPELGVLAGTM 86 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 87 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 132 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R + F + ++ +YYV+L + + I+ + + I++N+ Sbjct: 133 GLQGVPRGWLFGLVDLSSDLALYYVVLVVIACACLFIVRIVHSPFGQVLVAIKENEPRAT 192 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AGA + ++ + +V+ + ++GGM +L Sbjct: 193 SLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 252 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + S T + + +L ++ Sbjct: 253 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIACVLAFRRGIV 312 Query: 341 RL 342 Sbjct: 313 GE 314 >gi|325523244|gb|EGD01610.1| branched-chain amino acid transporter permease [Burkholderia sp. TJI49] Length = 325 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 132/324 (40%), Gaps = 16/324 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+Y +LL L A Y + ++L + +FA ++++G GLLS + A Y Sbjct: 6 VLYGVLLAALLVAPFIGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 64 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + G + L + + + G+ +GL +++ +G Y A+ TL +++ I ++ Sbjct: 65 ATGYSMQTLGFTPELGVLAGTVAATLLGLAVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 124 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ + R F + ++ +YYV+L + + + I+ Sbjct: 125 A--------------PFTHGEDGLQGVPRGRLFGLLDLSNDVALYYVVLAVIVAACAFIV 170 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + I++N+ SL KL AF +S+ G+AG+ + Sbjct: 171 RVVHSPFGQVLIAIKENEARAISLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 230 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318 ++ + +V+ + ++GGM +L A+++ + + + + + + + + S Sbjct: 231 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 290 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 291 SATIVTGLIFIACVLAFRRGIVGE 314 >gi|302060728|ref|ZP_07252269.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] Length = 391 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 102/353 (28%), Gaps = 36/353 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ ++ L L + + +M + L Y A GL + G G+LSL + + Sbjct: 13 GVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFG 72 Query: 76 IGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 +G Y + + ++ + + S+ Sbjct: 73 LGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQITELPALWVPFHSFTFSVFAVIAV 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA--------DRLYFLGTTVRSLIRFFRFP 173 + I+ + + I + L + + + Sbjct: 133 PVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGINGITDIKTLLGWD 192 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 ++ +Y+V G+ I ++ + + +RD ++ + K+ Sbjct: 193 IRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERVRFSGYDVAGFKIF 252 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + V++ F + G FA +SP +I ++ +GG SL + ++ Sbjct: 253 VYCVAAGFSAIGGGLFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGSLLVNY 312 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 F SF LM V++ L L Sbjct: 313 GKTY--------------FSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESH 351 >gi|121605622|ref|YP_982951.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120594591|gb|ABM38030.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 322 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 102/289 (35%), Gaps = 12/289 (4%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 P+L L A S+ +I I +FA L +++G G++SL + +G Y+ Sbjct: 19 PVLWLLAFAAPLLVPSHASIINEIAIVALFAVSLDLILGYTGIVSLGHAAFFGMGGYAAA 78 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + + V + + G ++ + TL + I + K Sbjct: 79 LFAKLVMPDPLVGLAVGIVTATLLGAACSFTIMRGSDLTRLMVTLGVGLILLELANKLDW 138 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ LGT F + + L + ++ + Sbjct: 139 LTGGADGLQGVVMGPLLGT------------FEFDLAGRTAAWYSLTVLLALFVLLRRVV 186 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + IRDN+ ++ + + +++ G AGA + S D+F+ Sbjct: 187 HSPFGATLKAIRDNRLRAMAIGIPVNRKLAVVYTLAAGVAGAAGALMTQTTGFASLDLFE 246 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 F + V+ I+++GG L + + + + Y+ + Sbjct: 247 FHRSADVMLILVIGGTGWLYGGVAGAIVFKLMQDALSSITPQYWTFWIG 295 >gi|163732410|ref|ZP_02139856.1| putative permease component of ABC transporter [Roseobacter litoralis Och 149] gi|161394708|gb|EDQ19031.1| putative permease component of ABC transporter [Roseobacter litoralis Och 149] Length = 368 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 97/346 (28%), Gaps = 28/346 (8%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 ++K L L + + ++ + +Y M A +S+ GS G+L++ Sbjct: 7 HNKTLQWLFYAAAFAVLGAVPLISDDAFLLNQLAIYGVYGMLAVSISLCWGSGGILNMGQ 66 Query: 71 VIAYAIGAYSYVILGSR-----------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 IA+ +GAY + + +P + L + Sbjct: 67 GIAFGLGAYCMAMTMQMQTQAEGTIPPFMLNNGLDSLPQLWQPFQNTATGITLALVVPTA 126 Query: 120 DYLAIATLIMSEIFQ---NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 YL ++ + ++ ++ + Sbjct: 127 FYLIFGGIMFTARVSGPFFAIMTLATLSAFATIFVDLQPYTNGVNGISPPGSLNLGNLEI 186 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 Y Y+ + M + ++ R ++D+ + L + + + Sbjct: 187 DPYSSGAYWSVFAMLVACTVAAKLINQSRFGLVVRALKDDPERVRFLGYNVAVYETLVYT 246 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S +AG FA +SP F+ +I ++ LGG SL + G Sbjct: 247 LSGLIAAIAGCCFAVLTQYVSPAQFEVGFSISIVIWTALGGRNSLIWAMFGAFAVQGAQS 306 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F ++ + LV+ L Sbjct: 307 YV--------------GDQFLSTWILILGFSFILVVRFLPGGFAGL 338 >gi|330836845|ref|YP_004411486.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Spirochaeta coccoides DSM 17374] gi|329748748|gb|AEC02104.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Spirochaeta coccoides DSM 17374] Length = 297 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 94/305 (30%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ + +GAY S + L W+ V Sbjct: 10 LTNGLSLGSLYALVAIGYTMVYGILRLINFAHGDIFMLGAYFAYYAISVFFLPWWVGAVV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ A G+++ + + + I+ +I + L + G Sbjct: 70 AIGLTCATGLLIERVAYRPLRNSPRISVMISAIGVSFFLENLATVIFGGRPKAFPVPAVL 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + + + +++ + RT A R + + Sbjct: 130 GK----------SIMIGKVSIMPVSLIIPVATLVILLALMYVVHRTRTGMAMRAVSRDYT 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA S G + ++ P M I +LGG+ Sbjct: 180 AAKLMGIDVNRIIAITFATGSILAAFGGIMWGLKYPQLQPLM-GVMPGIKCFIAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L L + + + L ++L++ Sbjct: 239 GNIMGAVLGGLVLGLAEILITAFLPAL-----------SGYRDAIAFVILIAILLLKPSG 287 Query: 339 LLRLR 343 +L + Sbjct: 288 ILGTK 292 >gi|226192952|ref|ZP_03788564.1| ABC-transporter [Burkholderia pseudomallei Pakistan 9] gi|225935042|gb|EEH31017.1| ABC-transporter [Burkholderia pseudomallei Pakistan 9] Length = 585 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|118588420|ref|ZP_01545829.1| putative branched-chain amino acid transport system permease [Stappia aggregata IAM 12614] gi|118439126|gb|EAV45758.1| putative branched-chain amino acid transport system permease [Stappia aggregata IAM 12614] Length = 358 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 75/328 (22%), Positives = 134/328 (40%), Gaps = 13/328 (3%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + V + F + A + ++ S+ I L++ + A GL+I+ G G LSL + Sbjct: 27 VGLAVILITAFAVIPALANDFFLTSIMIPFLVFSLAAIGLNILTGFCGQLSLGTGAFMGV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ + ++ +++ +S + S A G + GLPSL+ +G YLA+ TL + Sbjct: 87 GAYAAYKLTSIFPDANVIVMVLLSGVFSAAIGAVFGLPSLRIKGLYLAVTTLAAQFFLEW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I+ + N V F + + Y+++LG+ L A Sbjct: 147 CFIRIPWLYNYN---------ASGAIEVPRREVFGIIATGAEATPLARYFIVLGITVLIA 197 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 ++ + R I +W IRD A + + KL AFAVSS G+AGA + Sbjct: 198 FLMANVLRGRIGRSWMMIRDMDIAAELMGIRPLQTKLMAFAVSSYICGVAGAMMVFFWLN 257 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 P + + V+ +VILGG+ SL A + + + + L Sbjct: 258 AAEPSSYSIRLSFQVLFMVILGGLGSLGGAFMGAAFIWILPVILKFVPGLLGFDLAA--E 315 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ + +++ H RL Sbjct: 316 TVEHATFMIVGALIIFFLIVEPHGFARL 343 >gi|239906880|ref|YP_002953621.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239796746|dbj|BAH75735.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 306 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 98/304 (32%), Gaps = 21/304 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + LIY + A G ++V G + L++ Y +GA+ + S ++ Sbjct: 18 LVNGFTLGLIYALIAVGYTMVYGVIELINFAHGEIYMLGAFLTLSFISMGLPLPLAVLLA 77 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ + R + +A LI + L I G + F Sbjct: 78 MLAAAAIGVLLDIIAYRPLR-EAPRLAALITAIGMSIFLQNLAMIIWGSR------PMPF 130 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + S V + L + L + RT + A R + NQ Sbjct: 131 PKQALPAFFSEPALTFSDVTISWMQVIIYAVALLLMVGLNLIITRTRVGTAMRALAQNQT 190 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA MAG + + + P M + + + +LGG+ Sbjct: 191 AASLMGINVNRVISFTFALGSAMGAMAGIMVSMYYNTMYPTMGYLA-GVKAFAAAVLGGI 249 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L L G + + + LVI+ R Sbjct: 250 GSVPGAMLGGVVLGIAETLGAGYVS-------------SPYRDGVAYAVMILVIIFRPSG 296 Query: 339 LLRL 342 LL Sbjct: 297 LLGR 300 >gi|146279319|ref|YP_001169477.1| hypothetical protein Rsph17025_3288 [Rhodobacter sphaeroides ATCC 17025] gi|145557560|gb|ABP72172.1| hypothetical protein Rsph17025_3288 [Rhodobacter sphaeroides ATCC 17025] Length = 332 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 115/310 (37%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +G I + Sbjct: 45 FLMKLLCFALFAAAFNLLLGYTGLLSFGHATFFGGSAYFTAHAVKVWGWQPEFGILLGVA 104 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + A G++MG +++ +G Y A+ TL +S++F ++ Sbjct: 105 GAAALGLVMGAIAIRRQGIYFAMITLALSQMFFFFCLQAGFTHG--------------ED 150 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MY+ +L + L I + + IR+N+ Sbjct: 151 GIQSVPRGRLFGMINLNDTTNMYFFVLVVFALGMLAIWRFVNSPFGMILKAIRENEPRAI 210 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AG A + + + VI + +LGG+ +L Sbjct: 211 SLGYSVAEYKLGAFVMSAALAGLAGGVKALVFQFATLTDVTWQMSGEVILMTLLGGIGTL 270 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ + F T + + +L+ ++ Sbjct: 271 VGPVVGAGLVVTLQNYLATSQFPV---------------TIITGLVFMACVLLFRRGIVG 315 Query: 342 LRTPSNFLER 351 S + Sbjct: 316 EFYASRLGRK 325 >gi|332284980|ref|YP_004416891.1| putative branched-chain amino acid transport permease [Pusillimonas sp. T7-7] gi|330428933|gb|AEC20267.1| putative branched-chain amino acid transport permease [Pusillimonas sp. T7-7] Length = 323 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 131/324 (40%), Gaps = 16/324 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ +L+ + + + ++I+ Y +FA ++++G GLLS AY Sbjct: 5 LISYILVAIIIALLPAIGAYPIFVMKIMCYALFACAFNLLLGYTGLLSFGHAAFLGGAAY 64 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + +G + + ++ G++MG +++ G Y A+ TL M+++ ++ Sbjct: 65 ATGHSLAVWGFPTIVGLLFGTGVAAVMGLVMGALAIRRSGIYFAMITLAMAQMVFFFFLQ 124 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 G+ G+ R + +I +YYV++G+ F+ +I Sbjct: 125 APFTH-GEDGLQGIPRGTLF--------------GLDLAQDINLYYVVMGIFFIGYAICW 169 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + IR+N+ SL + KL F +S+A G+AGA A + Sbjct: 170 RTINSPFGQVLKAIRENEPRTVSLGYNVDNFKLLVFVLSAALAGLAGATKALVFVSATLS 229 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318 + + +VI + ++GG+ + + I++ + + N + +++ Sbjct: 230 DATWQMSGMVILMTLIGGLGTFTGPVIGAFIVVMLENKVGEFGRFLSNTTGIEWFKVLGE 289 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 T ++ + + ++ ++ Sbjct: 290 SVTIVIGLIFIICVMAFRRGIVGE 313 >gi|318604901|emb|CBY26399.1| urea ABC transporter, permease protein UrtB [Yersinia enterocolitica subsp. palearctica Y11] Length = 533 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 81/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ S + + + +++ + Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQLAPHWLALYPLVALPVAFFITAGIGMA 319 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ + L + + + Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQGVRMIFGAQNLEVANLAWLSGGVQLLPNL 377 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 378 VLPWNRIAVIAFVVIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGKVDMLAFGL 437 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 438 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 496 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530 >gi|288905952|ref|YP_003431174.1| amino acid ABC transporter [Streptococcus gallolyticus UCN34] gi|306831971|ref|ZP_07465126.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978918|ref|YP_004288634.1| branched-chain amino acid ABC uptake transporter membrane-spanning protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732678|emb|CBI14250.1| putative amino acid ABC transporter, membrane protein [Streptococcus gallolyticus UCN34] gi|304425897|gb|EFM29014.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178846|emb|CBZ48890.1| branched-chain amino acid ABC uptake transporter membrane-spanning protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 294 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 104/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y +GA+ S ++ W+ + Sbjct: 10 LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFIGYYAISSLHMNFWIALIF 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + GMI+ + + IA LI + L G Sbjct: 70 TMIATACLGMIIEFLAYRPLRHSTRIAALITAIGVSFFLEYGMVFLVGANTRS------- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + V +L+ L ++ L +++T + A R + + Sbjct: 123 ----FPQAIDIVSYKIGSVTVTNIQLLILIVSLVLMVALQLIVKKTKMGKAMRAVSVDSD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I P M + I +LGG+ Sbjct: 179 AAELMGINVNSTISFTFALGSALAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L +N + ++ L +++L+R Sbjct: 238 GIIPGAALGGFVIGILETLSISLN-------------LSSYRDAIVYGVLIIILLVRPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|218778556|ref|YP_002429874.1| branched-chain amino acid ABC transporter permease [Desulfatibacillum alkenivorans AK-01] gi|218759940|gb|ACL02406.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 320 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 125/287 (43%), Gaps = 9/287 (3%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + L + Y+ + I ILI+ + A +++G G+ S V + IG Sbjct: 4 LMAIIYGGLAIMPLFVGGVDYMMHILIMILIWGVVASCWDLIMGFAGIFSFGQVAFFVIG 63 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ I+ +++G+ + I ++ I+ G+++GLP L+ +G Y+A+ T + I + L Sbjct: 64 AYASAIVSNKFGIPPFFSIFIAGGIAAILGVLVGLPCLRLKGAYVALVTFAVHMILEPFL 123 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 G G + + ++ ++Y+ L + + + I Sbjct: 124 KGHMGRAIGTGGSRGI---------LTIPPINIFGYAFTPDNKVAVFYLTLVLAVICSVI 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 IL + R+ A+ ++D++ SL + KL+ FA++S GM G F+A +S Sbjct: 175 ILMVIRSFWGTAFLALKDSEDFSASLGVSAFKYKLAVFALTSFLTGMVGGFYAHYVGMLS 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 M + ++ ++++GG+ + + + E+ + Y Sbjct: 235 TRMLGIDLFVTLMIMLVIGGIGQFPGAILGAIVTVTLNEMLSPLGPY 281 >gi|84684178|ref|ZP_01012080.1| ABC transporter permease protein [Maritimibacter alkaliphilus HTCC2654] gi|84667931|gb|EAQ14399.1| ABC transporter permease protein [Rhodobacterales bacterium HTCC2654] Length = 323 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 123/339 (36%), Gaps = 41/339 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L V+ L + + + + ++ I + A L++++G GL+S Sbjct: 6 IITLVVMALLAVLPPVFYLTGNAFYLDLATRLTILAIAAVSLNLILGYGGLISFGHAAYL 65 Query: 75 AIGAYSYVILGSRYGL-----------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 IGAY+ I + S ++ IP++ ++ ++ G L+ +G Y Sbjct: 66 GIGAYAVGIPAHHWLYGGLESLGLATTSGYVQIPLAIGVAALFALVTGAICLRTKGVYFI 125 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 + T+ +++ ++ + G G+ + R + ++ F ++ Sbjct: 126 MITMAFAQMMYYAIVSIEE-YGGDDGLVIDSRSELPFIDLDDPLQLFGLAYVSLVV---- 180 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 + I+ + + R + N + L +L+A+ ++ A G Sbjct: 181 ----------AMLIVRMIVNSRFGMVLRGAKGNNERVVMLGFNTYLFRLTAYVIAGAMAG 230 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 AGA ISP+M + + ++ +VILGG +L + I + E+ + Sbjct: 231 YAGALLGNFTTFISPEMMDWGRSGELMFMVILGGTATLVGPVIGATLFIVLEEVLSSLTV 290 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 Y+ + L V+L ++ + Sbjct: 291 YWH---------------LPFGLLLLAVVLFGKGGIMGM 314 >gi|209965125|ref|YP_002298040.1| high-affinity branched-chain amino acid transport system permease protein LivH [Rhodospirillum centenum SW] gi|209958591|gb|ACI99227.1| high-affinity branched-chain amino acid transport system permease protein LivH [Rhodospirillum centenum SW] Length = 311 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 108/323 (33%), Gaps = 29/323 (8%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------- 80 LG +++ + IY + A G ++V G + +++ Y +GA+ Sbjct: 4 AALGLGTFLQHLINGLTLGAIYGLIAIGYTMVYGIIRMINFAHGEIYMLGAFVAVTGFTL 63 Query: 81 -YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + L + +++ S + + A G + + + +A LI + L Sbjct: 64 LSALGVQSVALGLIVVLAASILFTAAYGWTVERVAYRPLRGSGRLAPLISAIGMSIFLQN 123 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + +T G R L + I ++ + + ++++ L AS + Sbjct: 124 YVMLTQGA-------RPKPLQPVLSGGITLWQGETFALGITYIQAFIIVLTVALMASFTV 176 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + RT + A R ++ L + F + ++ +AG + Sbjct: 177 LIARTPLGRAQRACEQDRTMAALLGINVDRTISLTFVMGASLAAVAGVLVTMYYGVVDFY 236 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F + + +LGG+ SL ++ + G + + F Sbjct: 237 -IGFLAGLKAFTAAVLGGIGSLPGAMLGGLLIGLIEAFFTGYVSGAYKDVAAFS------ 289 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 L LV+++R LL Sbjct: 290 -------ILILVLVLRPTGLLGR 305 >gi|114765023|ref|ZP_01444170.1| branched-chain amino acid ABC transporter, permease protein [Pelagibaca bermudensis HTCC2601] gi|114542570|gb|EAU45595.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. HTCC2601] Length = 618 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 120/309 (38%), Gaps = 34/309 (11%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 +++ + I ++I+ +FA L ++GS GL+S + GAY+ +L + Sbjct: 328 FVDQFMLILTIDMVIFALFAASLHFILGSGGLVSFGHAAFFGGGAYAAALLVFHTDTPME 387 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + + +G + +G ++ G Y A+ TL S++ ++ +W+ +T G G+ Sbjct: 388 LAFLFAPLAAGLLALGIGWFCIRLTGVYFAMLTLAFSQLVWSLAFQWRAVTRGDDGLVNI 447 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 +L T YY L + + + + A R Sbjct: 448 WPSEWLSGTET------------------YYYFALILGVGGILFLRHVIHSPFGYALRAG 489 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 RD+ + + + + AFA++ A G+AG F ++ + P + +++ + +V Sbjct: 490 RDSPRQAEATGIDVKRVQFVAFALAGAMAGLAGGIFVFAKGSVFPTELEIAKSFDALIVV 549 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 LGG+ +L+ + V + + L+ + + V++ Sbjct: 550 FLGGVKTLAGGVVGAGFMTVVEDWLTRL----------------EYWRLLLGLVIIAVVI 593 Query: 334 MRSHSLLRL 342 + ++ Sbjct: 594 VMPEGIVGT 602 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 99/308 (32%), Gaps = 28/308 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLI 96 + + A GLS++ G +++ Y +GA+ Y++ + W I Sbjct: 8 FLTGLANAAALFLVASGLSLIFGVTRIVNFAHGSFYMLGAFIGIYLMEILPGAVGFWGAI 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + G G + + L+ + L+ + ++ + G Sbjct: 68 LLTGIAVGLIGAFVEMVVLRPIYRAPELFQLVATFGVILVIQDLALMIWGAEDRLGPRAP 127 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + + ++ F+ ++ + +T + R + Sbjct: 128 GLRGV----------WRIFGEPVPKYDIILIAITPFILFALWYLITKTRLGVLVRAATQD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + FA+ SA G GA + F+ V +V++G Sbjct: 178 REMVGALGVNQAWLFTGVFALGSALAGWGGALQLPKGGA--DLLMDFNIIGAVFVVVVIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL A+ ++ + LM + + +V+++R Sbjct: 236 GMGSLPGAFIASVLISVLNVFGVTY--------------LPQSTLVLMFVVMAVVLIIRP 281 Query: 337 HSLLRLRT 344 + LL Sbjct: 282 YGLLGREE 289 >gi|330969708|gb|EGH69774.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str. M302273PT] Length = 529 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|241663461|ref|YP_002981821.1| urea ABC transporter permease protein UrtC [Ralstonia pickettii 12D] gi|240865488|gb|ACS63149.1| urea ABC transporter, permease protein UrtC [Ralstonia pickettii 12D] Length = 389 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 97/357 (27%), Gaps = 32/357 (8%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 ++ + LL Y ++ +I+ Y + A L +V G G+LSL + Sbjct: 29 SLIVCIGAPVCALLVPEGSPLHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGL 88 Query: 73 AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 +A+G Y + +++ L Sbjct: 89 FFALGGYGMGMYLMRSIGREGVYKSDLPDFMVFLDWKELPWFWHGTEHFAWAMLLVILVP 148 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + A + +I + + + R FP Sbjct: 149 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 208 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 S + ++ L+ + + IRD + + KL Sbjct: 209 SALPTRTVLFVATFVALVLAFIACRAIVTSKFGRVVTAIRDAEARVMFSGYNPLGYKLFV 268 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 + S+ G+AGA + I+P +I + V +GG +L ++ G Sbjct: 269 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPIIGAFLVNGA 328 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L ++ LV L + +L L + +R Sbjct: 329 KTLLTAW--------------VPEYWLFVLGAIFVLVTLYLPNGVLGLMSKLRMKKR 371 >gi|116249708|ref|YP_765546.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115254356|emb|CAK03984.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 348 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 108/312 (34%), Gaps = 26/312 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 +L + A + +I I +FA L +V+G G++SL + +GAY+ Sbjct: 27 IVLWIAAVVAIFVLPSKMLLLTEIAITALFALSLDLVLGYAGIVSLGHAAFFGLGAYAAG 86 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + +A +SG G L+ + TL ++ + + + Sbjct: 87 LFAKYAIAEPVTGLFAAAAVSGLAGFGASFLVLRGSDLTRLMTTLGIALMLAELANQMAW 146 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ LG L Y L F+ + L Sbjct: 147 VTGGADGLSGVTIGPILGLFEFDLWGRTG------------YVYSLAALFVLTFVARHLV 194 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ + R I+ N + + + +++A+ G+AGA + +SPD+ Sbjct: 195 NSSFGLSLRAIKANPMRAAMVAIPARNRIIVIYTIAAAYAGIAGALLTHTTSFVSPDVLA 254 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F + V+ ++++GG+ L I + + S Sbjct: 255 FHRSADVLLVLVIGGVGYLYGGIIGAVIFTVLRDWLS--------------VSTPQYWMF 300 Query: 323 LMVIALFLVILM 334 + + L ++L+ Sbjct: 301 WIGLILIAIVLV 312 >gi|84499956|ref|ZP_00998222.1| ABC transporter permease protein [Oceanicola batsensis HTCC2597] gi|84391890|gb|EAQ04158.1| ABC transporter permease protein [Oceanicola batsensis HTCC2597] Length = 330 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 58/330 (17%), Positives = 116/330 (35%), Gaps = 29/330 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + L L + + + +G +IL Y + A L +++G L+S Sbjct: 22 AALVLFVLFALMPPLASALNDPFYVLIGTRILAYAIAAMALDLILGFGALVSFGHAAYLG 81 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY+ IL S ++L I ++S +I G SL+ +G Y + TL ++ Sbjct: 82 FGAYAVAILSSYGIDDLFLQIAAGIVMSAGFALITGAISLRTQGVYFIMITLAFGQMAFF 141 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I R + + + +YY L + Sbjct: 142 FFISLSAYGG--------------DDGYSLSQRSGVLGTDLLGSDYGLYYTTLALLIAVF 187 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + + + + IR+N+ ++ +L+AF +S+ +AG A Sbjct: 188 VLCNRIVNSRFGRVFTGIRENRTRMEAVGYAPFRFQLTAFVISACLTSVAGVLLANQAQF 247 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +SP + + +I +V+LGG+ +L+ + + + E + ++ Sbjct: 248 VSPAFMSWHRSGELIVMVVLGGVGTLTGGIVGAVVALLLEEWLGMLTHHWP--------- 298 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L L L++L + L Sbjct: 299 ------LLFGTFLVLMVLFSPRGITGLIER 322 >gi|327479079|gb|AEA82389.1| ABC transporter, membrane spanning protein [Pseudomonas stutzeri DSM 4166] Length = 328 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 58/330 (17%), Positives = 127/330 (38%), Gaps = 29/330 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 +L+ + A + +++L + +FA ++++G G+LS + AY Sbjct: 21 VLILIGVVALALAPFYFYPIFLMKVLCFALFACAFNLLLGYTGILSFGHAAFFGGSAYFT 80 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +GL+ L I V + G+I+G +++ +G Y + TL +S++F ++ Sbjct: 81 AHAVKEWGLTPELGILVGVAGAAFLGLIIGFLAIRRQGIYSTMITLALSQMFFFFCLQAS 140 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 ++++ R F + ++MY+ +L + +I + Sbjct: 141 FTHG--------------EDGIQNIPRGHLFGLIDLEEPLYMYFFVLSVFLAGMLLIWRV 186 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + R+IR+N+ SL T+ KL AF +S+A G+AG A + Sbjct: 187 IHSPYGMILRSIRENENRAISLGYTVSRYKLGAFVMSAALAGLAGGLKALVFQFATLTDV 246 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + + V+ + +LGG+ +L A++ + T Sbjct: 247 SWQMSGEVVLMTLLGGIGTLVGPIFGAALVTTLGNYFATSELPV---------------T 291 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + I + +L+ ++ S ++ Sbjct: 292 LVTGIIFMVCVLVFRRGMIGELYASRLGKK 321 >gi|320322765|gb|EFW78858.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] Length = 529 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 77/288 (26%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G G++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLPGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|30261968|ref|NP_844345.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47527231|ref|YP_018580.1| branched chain amino acid ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor'] gi|49184808|ref|YP_028060.1| branched-chain amino acid ABC transporter permease [Bacillus anthracis str. Sterne] gi|65319251|ref|ZP_00392210.1| COG4177: ABC-type branched-chain amino acid transport system, permease component [Bacillus anthracis str. A2012] gi|165870114|ref|ZP_02214770.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167632928|ref|ZP_02391254.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|167638374|ref|ZP_02396651.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170705979|ref|ZP_02896441.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177650843|ref|ZP_02933740.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190566292|ref|ZP_03019210.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|254684531|ref|ZP_05148391.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. CNEVA-9066] gi|254721289|ref|ZP_05183079.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A1055] gi|254734834|ref|ZP_05192546.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. Western North America USA6153] gi|254741235|ref|ZP_05198923.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. Kruger B] gi|254755489|ref|ZP_05207523.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. Vollum] gi|254760025|ref|ZP_05212049.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. Australia 94] gi|30256594|gb|AAP25831.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47502379|gb|AAT31055.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178735|gb|AAT54111.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. Sterne] gi|164714002|gb|EDR19523.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167513675|gb|EDR89044.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|167531740|gb|EDR94405.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|170128981|gb|EDS97846.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|172083304|gb|EDT68365.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190562427|gb|EDV16394.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] Length = 333 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 130/325 (40%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F +YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TLYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T ++ + +V+L+ L+ Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311 >gi|187925993|ref|YP_001892338.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|241665478|ref|YP_002983837.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|187727747|gb|ACD28911.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|240867505|gb|ACS65165.1| inner-membrane translocator [Ralstonia pickettii 12D] Length = 302 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 119/302 (39%), Gaps = 41/302 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ + + I + A + + + S GLL++ IGAY+ +L + + + Sbjct: 11 YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTAALLTMNAEMPFSVALLG 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++G P+L+ G YLA+ATL E+ + +++ + T G G+ +L Sbjct: 70 GMVAPAVVAVVIGRPTLRLSGVYLAMATLGFGEVVRVLILNTEDWTGGALGLNGIPQLTE 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L+ ++ +RR+ + A+ I++++ Sbjct: 130 WWH-------------------------VALAVALTMFVLARMRRSKVGRAFEAIKEDET 164 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + KL AF + + G+AGA A I P+ F F + ++++ ILGG Sbjct: 165 AAGLMGINVAGTKLLAFTLGAVIAGLAGALNAHLTFFIGPNEFGFDRGVEILTMTILGGT 224 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L+ + IL + EL + + + L +++L Sbjct: 225 NGLTGPVLGSLILSLLPELLRAFKDF---------------RLVVNGVILMVIVLFLPKG 269 Query: 339 LL 340 + Sbjct: 270 IW 271 >gi|116253491|ref|YP_769329.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258139|emb|CAK09240.1| transmembrane component of a broad range amino acid ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 300 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 92/304 (30%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +G ++ +I+ L Sbjct: 8 LLNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ ++ + + +A L S ++ Sbjct: 68 VLLLVMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSITLSN---FIQVTQG 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +++ L + RTA+ A R ++K Sbjct: 125 PRNKPIPPMVSSVYQFGNISVSLKQIIIIVITAVLLTIFWYIVNRTALGRAQRATEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + S + F+ + + +LGG+ Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASFND-GFTPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L V++ + Sbjct: 244 GSLPGAVFGGLLIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|86606568|ref|YP_475331.1| urea ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] gi|86555110|gb|ABD00068.1| urea ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] Length = 402 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 96/315 (30%), Gaps = 21/315 (6%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + ++ +L +F+ T + ++ + L + A G+ ++ G G+LSL Sbjct: 45 SSRKLLWEAGILIVLVLALIFVAPTVLSGFRLNLLGRFLALSIVALGIDLIWGYTGMLSL 104 Query: 69 NCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMISGACGMIMG 111 + +A+G Y+ + G W + A +I Sbjct: 105 GHGVFFALGGYALGMHLKLQLPEGQIPEFFSLYGVTELPWFWYPFYSFPFTAVAVVLIPA 164 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 L + + + RL + + F Sbjct: 165 LVAAALGYLVVRNRIRGVYFSILTQATTIIFF----NFFNGQQRLINGTNGLTNFQTLFG 220 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + +Y + L+ + WL IRD++ K Sbjct: 221 LDVNSSEMRFAVYVTTVLAVVLAYLLCRWLTSGLFGRILVAIRDDEPRVRFSGYDPTGFK 280 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 + FAVS+A G+AGA F ISP+ +I ++ V +GG SL ++ Sbjct: 281 VLVFAVSAALAGVAGALFTLQTGIISPNAMAVPFSIEMVIWVAVGGRASLVGAVLGALLV 340 Query: 292 IGVVELCCGMNFYYF 306 L + Sbjct: 341 NFAKSLLSENFPEIW 355 >gi|320335000|ref|YP_004171711.1| ABC transporter integral membrane subunit [Deinococcus maricopensis DSM 21211] gi|319756289|gb|ADV68046.1| ABC-type transporter, integral membrane subunit [Deinococcus maricopensis DSM 21211] Length = 337 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 101/308 (32%), Gaps = 16/308 (5%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-------SRYGLSIWLLIPVSAM 101 Y + A G ++V G L L++ + GA + L + + + + + Sbjct: 24 YAIIALGYTMVYGVLQLINFAHSEVFVTGAIVGYEVFRVLEPSPMNGYLKLIIALIAAMI 83 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI-------YVAD 154 +SG +++ + + + + LI + IL I G G Sbjct: 84 VSGGLNVLIERLAYRPLRNAPKLVPLITAIGVSLILQDLLKIIEGLQGRFDLTYTLPQGF 143 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 F T V ++ +++ A + + T + A R + Sbjct: 144 SNKFCATGSSCAAFGDTLRRIGVDLQVKDIILVVVALLSLAVLNYLVNHTRLGRAIRAVA 203 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++ + + F + A G++G F ++ F II + + Sbjct: 204 QDRVTAGLMGIDSNRMISATFLIGGALGGVSGVLFGMKFGTVNAYS-GFDPGIIAFTAAV 262 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-VIALFLVIL 333 LGG+ S+ +L + L N + + + + + + I L L+++ Sbjct: 263 LGGIGSIPGAVLGGLLLGVIQNLIGVTNVLGSITGIANLAAIDASYQRIGAFIVLVLILI 322 Query: 334 MRSHSLLR 341 + LL Sbjct: 323 FKPTGLLG 330 >gi|221639725|ref|YP_002525987.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221160506|gb|ACM01486.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 410 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 98/353 (27%), Gaps = 36/353 (10%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L G + L + A + +V G G+LSL + +A+G Y + Sbjct: 28 LASHAYGTAFLSTSFVKTLGKTLCLCLVALAMDLVWGYAGILSLGHMAFFALGGYMIGMW 87 Query: 85 GSRYGLSIWLL-------------------------------IPVSAMISGACGMIMGLP 113 ++ +P + + + + L Sbjct: 88 LMYARTEDIVVQALSNAPLPATPQEISDGVASQIFGVVGGAELPAVWAFAHSLPLQLALV 147 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L L L + + A + L P Sbjct: 148 VLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALALHLFQNDAGLRGNNGLSGLQNIP 207 Query: 174 SSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + ++ ++ G L + W+ + R IRD+++ L ++ Sbjct: 208 GLVQVSQDRLSVWFFWASAGALALGYLLAAWIVSGKFGSVLRAIRDDEQRVRFLGYSVES 267 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL F +++ +AGA + I+P +I + V +GG L A Sbjct: 268 YKLFIFTLTAVIAAIAGALYYPQAGIINPAELAPIASIYLAVWVAIGGRGRLYGAVIGAA 327 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + G + + L+ +A LV L + L Sbjct: 328 FVSLLSTWFTGGRAPDLSLGFA-TIQWVDWWQILLGLAFVLVTLFAPQGIGGL 379 >gi|167468153|ref|ZP_02332857.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis FV-1] Length = 146 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 15/149 (10%) Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 R + AW ++ A SL + KL+AF +S+AF G AG FAA + +SP+ F Sbjct: 1 MRMPLGRAWEAPSTDEIACRSLGLSSTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 60 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F E+ V++IV+LGGM S + A +L+ EL +N Y Sbjct: 61 TFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY---------------SM 105 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L+ + L+++ R LL ++ P L+ Sbjct: 106 LLLGALMVLMMIWRPQGLLPMKRPQLKLK 134 >gi|52550144|gb|AAU83993.1| branched-chain amino acid ABC transporter permease protein [uncultured archaeon GZfos35B7] Length = 303 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 113/299 (37%), Gaps = 13/299 (4%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 IY++ A GL+++ G + +++ +GAY+ + + L+ +L+IP++ +I Sbjct: 18 CIYILLAIGLNLIFGVMKVVNFAHGELLMLGAYATFWIYTFSDLNPYLVIPLAMIILAIL 77 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 G+ + + + + +S + + + Sbjct: 78 GVFIERLCFRPIMGTGKLNEIFLSLGLIYLFQNLAAVFWTTDSRSIHSPYSD-------- 129 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + + +++ ++ L++++ + A R N++A + Sbjct: 130 ---VSITLGSINLPVDYILIIVITAICLIALQLFMKKATLGRAMRATSQNREAATLMGIN 186 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + + +FA+ +AF AG+ S ++P + I ++VI+GG+ S+ Sbjct: 187 VERMDMLSFALGAAFAATAGSLCLISGQMVNPYVGSI-PAIEAFAVVIIGGLGSIPGAII 245 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 A L + LL + SF+ T+ I L +V+++R + + Sbjct: 246 AGLTLGIAENIVPLFLQSSV-GLLGLEMSFSAWKDTIAFIILIIVLVIRPTGIFGEKEE 303 >gi|213691481|ref|YP_002322067.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522942|gb|ACJ51689.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457554|dbj|BAJ68175.1| branched-chain amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 307 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 104/303 (34%), Gaps = 13/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ +GAY +L +++ L V Sbjct: 11 LFNGLKIGSVYALVALGYTMVYGIIRLINFAHGDFIMVGAYVL-MLTIPAIVAMGLPAWV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + +G+ K + M+ + I + + Sbjct: 70 AVIPAVLVCVAVGVIVEKAAYKPVREKGNSMTALITAIAMSLLLENGSQ------AVFGA 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 TV ++ + ++ + A + L+++ T A R + ++++ Sbjct: 124 DFQTVPTIFHLPSIAFGKLKLPGDTLLTIVIGLVIMAGLQLFVKFTRQGKAMRAVSEDKE 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +A + A+ ++S M + +LGG+ Sbjct: 184 AAVLMGINVNSTIALTFAIGSGLAAVASLMYCAAYPQVS-PMMGAMLGLKAFVAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + + L ++ S ++ L +V+L++ Sbjct: 243 GSIPGAMIGGLAIGLIESLTKAYIGTITGGIITSAFSDA-----IVFAILIIVLLVKPSG 297 Query: 339 LLR 341 ++ Sbjct: 298 IMG 300 >gi|330879668|gb|EGH13817.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 391 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 103/353 (29%), Gaps = 36/353 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ ++ L L + + +M + L Y A GL + G G+LSL + + Sbjct: 13 GVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFG 72 Query: 76 IGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 +G Y + + ++ + + S+ Sbjct: 73 LGGYCMAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPALWVPFHSFTFSVFAVIAV 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA--------DRLYFLGTTVRSLIRFFRFP 173 + I+ + + I + L + L + Sbjct: 133 PVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGINGITDLKTLLGWD 192 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 ++ +Y+V G+ I ++ + + +RD ++ + K+ Sbjct: 193 IRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERVRFSGYDVAGFKIF 252 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + V++ F + GA FA +SP +I ++ +GG SL + ++ Sbjct: 253 VYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGSLLVNY 312 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 F SF LM V++ L L Sbjct: 313 GKTY--------------FSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESH 351 >gi|317402683|gb|EFV83236.1| inner-membrane translocator [Achromobacter xylosoxidans C54] Length = 323 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 138/335 (41%), Gaps = 30/335 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + IL LA++ L LF + + S ++LIY + A L++++G G+++ Sbjct: 1 MMRTASILWTLALLAALALFPLVAPALGLDFYISFVRRVLIYALAATSLNLILGYGGMVA 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L + GAY+ IL S + PV+ +++ I G SL+ RG Y + TL Sbjct: 61 LGHAAFFGAGAYAVGILAMSGVTSALVSWPVAMLLAALLAFITGAISLRTRGVYFIMITL 120 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +++ I I + +L + P + ++ YY++ Sbjct: 121 AFAQMLFYIFISLRQYGG---------------EDGLNLPGYSSLPGIDLANDVAFYYLV 165 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + + + + + A + IR+N+ S+ + KL+AF +S A G+AGA Sbjct: 166 LVIFAVMMWLFGRVTLSRFGTALQGIRENESRMESMGYPVYRIKLTAFTLSGAVAGLAGA 225 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A ISP + ++++ ++ +V++GG+ +++ + E+ Y+ Sbjct: 226 LLANHNLFISPSLMHWTQSANLLIMVLVGGIGLRYGGVAGAVVMLVLEEVLRQWTEYWH- 284 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L V+ L+ L Sbjct: 285 --------------LPLGVLLLCVVFGAPRGLVGL 305 >gi|170694982|ref|ZP_02886131.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|170140080|gb|EDT08259.1| inner-membrane translocator [Burkholderia graminis C4D1M] Length = 440 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 109/321 (33%), Gaps = 30/321 (9%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L+ + L S+ QI I V FA ++++G G+LS + + GAY+ Sbjct: 48 ALIAAIALPFIFPGTLGISVLTQICIAVTFALAFNMLLGGTGMLSFGHALYFGTGAYATA 107 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR--GDYLAIATLIMSEIFQNILIKW 140 + +G ++ +++ A + + R A+ +L + ++ + Sbjct: 108 HFLNYFGEAVPVVLVPLVGGLAALLIGAFIALFTVRSGKVIFAMISLAVGQLAYSAATIM 167 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + G GI + + +Y+++ +L+A + Sbjct: 168 TGWSGGDEGIRLDPTQAAGW-------------GIDFGSPLAVYFLVAAWAWLAALAMHT 214 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 RT + RDN + + + + A +S+ F G+AGA +A + ++ D Sbjct: 215 FTRTPLGRLMNATRDNAERMNFVGFDPVMIRGLALTLSAGFAGIAGALYALAFQVVTLDT 274 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 +++ + +GG T+ ++ + + + Sbjct: 275 LSIAQSTNGMLHTYIGGHTTFLGPVVGAVLITVISAHLSALTDAWS-------------- 320 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + I +++ L Sbjct: 321 -LYLGIFFVAIVVSMRRGLTG 340 >gi|153004538|ref|YP_001378863.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] gi|152028111|gb|ABS25879.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] Length = 314 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 112/321 (34%), Gaps = 29/321 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + + LG + +L +FA ++++G GLLS AY Sbjct: 9 WAWAGLVLLGLVAPYLVYPVFAMNVLCLALFASAFNLLLGYAGLLSFGHAAFLGSAAYVT 68 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +GL L + ++ G++ G +++ G Y A+ TL +++ ++++ Sbjct: 69 GYALRSWGLPTELGVLAGTAVATLLGLVFGALAIRRSGIYFAMITLGFAQLVYFLVVQLP 128 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 T G+ G+ R + + MYY + G ++ Sbjct: 129 W-TGGEDGLQGIPR-------------GRALGLIALDRPLTMYYFVFGAFLAGFWLVQRA 174 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + R IR+N+ SL + KL AF +S+ G+AG+ A S Sbjct: 175 IHSPFGHVLRAIRENEPRALSLGYDVPRYKLLAFVLSAGLSGLAGSLKAVVLQFASLSDV 234 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + + V+ + +LGGM ++ + +++ + M T Sbjct: 235 HWHRSGEVVLMTLLGGMGTVMGPSVGALLVLTLENYLADM---------------GSWVT 279 Query: 322 TLMVIALFLVILMRSHSLLRL 342 + +L ++ Sbjct: 280 VITGAVFVACVLAFRRGIVGE 300 >gi|52550145|gb|AAU83994.1| ABC-type branched-chain amino acid transport system permease component [uncultured archaeon GZfos35B7] Length = 317 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 131/309 (42%), Gaps = 17/309 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V +L FL ++Y+ ++ I +L++ M++ +++ + G SL + IG Y Sbjct: 15 VTLILAFLLPLILGIKQYLLTVLILMLVFTMYSSAWNLLA-TSGQGSLGHAAFFGIGGYV 73 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 I+ + +GL + L I + + G+++GL ++ + +LA+ T + I Q I ++ Sbjct: 74 SAIISNSFGLPVILTIVIGGFFAAVIGVLIGLTCVRLKAWFLAMVTFGFAIIAQTITVEL 133 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G GI P + + + ++ YY++L + + II Sbjct: 134 SGLTGGWDGIPA----------------KKLVPVTIINHVMYEYYIILLIAVVVIVIIYL 177 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + ++ + A IR+N+ + + KL AFA S+ F G+AGA ++P++ Sbjct: 178 IMKSKMGLALEAIRENELEAKVMGINVTVYKLKAFAASAFFTGIAGALEIHHFGYVTPEV 237 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + + I + GG+ ++ T ++ + E+ Y +L + Sbjct: 238 YGIDISFWPIIYSVSGGLYTIGGPILGTVVITAIWEVLRSFGMTYGRFILIGLILILIVI 297 Query: 321 TTLMVIALF 329 + Sbjct: 298 FLPKGLISI 306 >gi|149377829|ref|ZP_01895560.1| possible ABC transporter, permease protein precursor [Marinobacter algicola DG893] gi|149357887|gb|EDM46378.1| possible ABC transporter, permease protein precursor [Marinobacter algicola DG893] Length = 308 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 114/330 (34%), Gaps = 29/330 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++ L G + +L + +FA ++++G GLLS + AY Sbjct: 5 VLFIIMLVAGLGAPFYAYPVFVMDLLCFALFACAFNLLLGYAGLLSFGHAAFFGGAAYIT 64 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + +G I + G I G +++ +G Y A+ TL +++I + ++ Sbjct: 65 GYVTKEWGFGPIFGILAGTGFALILGTIFGFLAIRRQGIYFAMVTLALAQIIYFLALQMP 124 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 T G+ G+ R F + EI MYY + + + +II Sbjct: 125 -FTGGENGLQGIPR-------------GELFGFISLNNEIAMYYFVFAVFMIGFAIIHRT 170 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + IR+N+ SL + KL AF +S+ G AGA A + Sbjct: 171 INSPFGEVLQAIRENESRALSLGYDVDHFKLLAFIISATLAGTAGATKAVIFQFAALTNA 230 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + + VI + ++GG+ ++ + + Sbjct: 231 HWQTSGEVILMTLVGGLGTIFGPVLGAITVGALSHELSAF---------------GSWVQ 275 Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351 ++ + +++ ++ ++ Sbjct: 276 VILGTVFVVCVMVFRRGIVGEIQHRLLKKK 305 >gi|118592797|ref|ZP_01550186.1| ABC transporter permease protein [Stappia aggregata IAM 12614] gi|118434567|gb|EAV41219.1| ABC transporter permease protein [Stappia aggregata IAM 12614] Length = 340 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 64/329 (19%), Positives = 118/329 (35%), Gaps = 30/329 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L+ L + + + +I +Y+ A +++ G GL+S+ Sbjct: 19 VAAVAGVLVLIVLVSAPLWAGRADMRLLSEIFLYLSLACLWNLLAGYAGLVSVGQQAFVG 78 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 G Y L GLS IP++ ++ + + L + RG Y AI T +++E+F+ Sbjct: 79 FGGYMLFALAIFAGLSPLAAIPLAGLLGAVIAVPVALLIFRLRGAYFAIGTWVIAEVFRL 138 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + G T + SS + E Y++ L M + Sbjct: 139 SFAQVSALGGGSG-------------TSLPVAIVRDMASSRSMREATTYWLALAMAVIVL 185 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++I L R+ A IRD++ A S I K + +++ M GA + R Sbjct: 186 AVIYLLLRSRNGLALTAIRDSELASESFGIDIWRNKFVVYVLTAGLTAMTGALIFLQKLR 245 Query: 256 ISPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ISPD VI IV++GG+ +L + + E + Sbjct: 246 ISPDAAFSVNDWTAFVIFIVVIGGIGTLEGPIIGVIVFFLLRETLSDL------------ 293 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ + V+L L Sbjct: 294 ---GTVYLLILGVVAIAVMLKAPKGLWGT 319 >gi|316932516|ref|YP_004107498.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315600230|gb|ADU42765.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 332 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 108/301 (35%), Gaps = 26/301 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + I+++ L +V G G+ +L + + AY+ L++ + Sbjct: 41 LAFLIRVIGLAFLVISLDLVTGFCGVATLGHAALFGVAAYAAGNACLAGITDPILMLLIG 100 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 A+ A G++ G+ +FRG + ++ ++ + K IT G G+ Sbjct: 101 AVAGAATGLMSGVLVTRFRGLPQLVLSIAFGQLVAALANKLSSITGGSDGLAGISPGPVF 160 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 G +F ++ Y + + ++ ++L R+ + R I+D+ Sbjct: 161 GI------------FNFDMFGRTGYVFSVVVLLITMVLLLRFARSPFALMCRAIKDDTLR 208 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + ++ + + V+ G+ GA A + + D F + + ++ILGG Sbjct: 209 TRMIGVSVYPRLVVMYCVAGVVAGIGGALTAINTGVVGLDSVSFERSAEALIMLILGGAG 268 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 +L + + +++ L+ + L +V+L L Sbjct: 269 NLWGALIGAILFELFHHYVSAASPFHW--------------MILIGVLLIVVVLFFPKGL 314 Query: 340 L 340 + Sbjct: 315 V 315 >gi|296136849|ref|YP_003644091.1| inner-membrane translocator [Thiomonas intermedia K12] gi|295796971|gb|ADG31761.1| inner-membrane translocator [Thiomonas intermedia K12] Length = 310 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 101/305 (33%), Gaps = 7/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + + L Sbjct: 8 IVNGLVLGSMYALIALGYTMVYGIVNLINFAHGDVMMVGALTAYTVFKVLDHVAPHLPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ ++ L + + +A L + LI ++ + + Sbjct: 68 LVVVIALIIAMLATGVLNYFIERIAYRPLRNAPKLAP-LITAIGMSILLETLAMIIWGRD 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L+ ++ +L+ L A + + T + A R +N + Sbjct: 127 YKVFPSGLLPSNVINVGGIVITPVQIMILIVTAVLLAGLTWLINHTKLGRAMRATAENPR 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F SAF + + +AG + A+ + M F+ + + +LGG+ Sbjct: 187 VASLMGVNPNFVISSAFVIGAMLAAIAGVMWFANFATANFYM-GFTPGLKAFTAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +LS +L + L G + + I L LV+ +R Sbjct: 246 GNLSGAMLGGILLGLIEVLGAGYIGTLTGGVFG-----SNYQDIFAFIVLILVLTLRPQG 300 Query: 339 LLRLR 343 LL R Sbjct: 301 LLGER 305 >gi|237808382|ref|YP_002892822.1| urea ABC transporter, permease protein UrtC [Tolumonas auensis DSM 9187] gi|237500643|gb|ACQ93236.1| urea ABC transporter, permease protein UrtC [Tolumonas auensis DSM 9187] Length = 360 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 108/350 (30%), Gaps = 33/350 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ + VV LL A ++ + L Y + A L +V G LG+LSL Sbjct: 18 AILIGSVLVVLSNLLLPHDSALYVGSNTVTLLGKYLCYALLAVALDLVWGYLGILSLGHG 77 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+G Y+ + R + + LP + ++ A L++ Sbjct: 78 AFFALGGYAMGMYLMRQIGTRGVYGDPVLPDFMVFLNWHELPWFWYGMNHFWFAMLMVVL 137 Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172 + + + + + + + + F Sbjct: 138 VPGLLAFVFGWLAFRSRVTGVYLSIMTQAMTYALLLAFFRNEMGFGGNNGLTDFKDIIGF 197 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + ++ + + L+ + + + + IRD + + + + KL Sbjct: 198 SLTDDATRAALFLITAVVLCLAYLVCRVIVGSKLGRVAVAIRDAEMRTRFMGYRVEYFKL 257 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 + F S+ G+AGA + I+P F +I ++ V +GG +L ++ Sbjct: 258 AIFVFSAMLAGVAGALYVPQVGIINPGEFSPLNSIELVIWVAVGGRATLYGAVVGAILVN 317 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + G+ + LV L + L Sbjct: 318 YAKSVFTGI--------------LPDEWLYALGALFVLVTLFLPKGVTGL 353 >gi|237806914|ref|YP_002891354.1| inner-membrane translocator [Tolumonas auensis DSM 9187] gi|237499175|gb|ACQ91768.1| inner-membrane translocator [Tolumonas auensis DSM 9187] Length = 306 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 15/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y ++ + + + Sbjct: 12 LLNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIGFMVITALMMMGIDSSVL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ + + +A L S ++ + + A Sbjct: 72 LMGAAFIVSILITS-CYGWSIERVAYRPLRGSNRLIPLISAIGMSIFLQNLVRFAQGSRD 130 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + P + + + + ++ R+ + A R ++ K Sbjct: 131 IAMPSLVQGGIEFGPGNAASLSYMQIIIFVVTFISMYGLSKFISRSRMGRACRACAEDIK 190 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG I+ F + + +LGG+ Sbjct: 191 MANLLGIDTNSVIALTFVIGAALASIAGILLGLYYGVIN-PSLGFMAGLKAFTAAVLGGI 249 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL L + ++ F L ++L+ Sbjct: 250 GSIPGAMIGGLILGVTEALTSAYLSSEYKDVVAFG-------------LLIAILLLMPTG 296 Query: 339 LLRL 342 +L Sbjct: 297 ILGR 300 >gi|76812256|ref|YP_331612.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia pseudomallei 1710b] gi|121598218|ref|YP_994652.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124384763|ref|YP_001027585.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126439804|ref|YP_001060981.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126450283|ref|YP_001082517.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|126454800|ref|YP_001068281.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134281573|ref|ZP_01768281.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167001270|ref|ZP_02267069.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|167721844|ref|ZP_02405080.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei DM98] gi|167740814|ref|ZP_02413588.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167847911|ref|ZP_02473419.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167896468|ref|ZP_02483870.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167904870|ref|ZP_02492075.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167913148|ref|ZP_02500239.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|167921085|ref|ZP_02508176.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|217423923|ref|ZP_03455423.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|238561555|ref|ZP_00441823.2| branched-chain amino acid ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|242315707|ref|ZP_04814723.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254174884|ref|ZP_04881545.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254184043|ref|ZP_04890634.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254201519|ref|ZP_04907883.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei FMH] gi|254206857|ref|ZP_04913208.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei JHU] gi|254259459|ref|ZP_04950513.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254357411|ref|ZP_04973685.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|76581709|gb|ABA51184.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia pseudomallei 1710b] gi|121227028|gb|ABM49546.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124292783|gb|ABN02052.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126219297|gb|ABN82803.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126228442|gb|ABN91982.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|126243153|gb|ABO06246.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|134247240|gb|EBA47326.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|147747413|gb|EDK54489.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei FMH] gi|147752399|gb|EDK59465.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei JHU] gi|148026475|gb|EDK84560.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|160695929|gb|EDP85899.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|184214575|gb|EDU11618.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|217392986|gb|EEC33008.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|238524322|gb|EEP87755.1| branched-chain amino acid ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|242138946|gb|EES25348.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|243062893|gb|EES45079.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254218148|gb|EET07532.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 324 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 122/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + Sbjct: 26 FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGVLAGTA 85 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 86 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + + I+ + + I++N+ Sbjct: 132 GLQGVPRGRLFGLVDLSSDLALYYVVLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAI 191 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AGA + ++ + +V+ + ++GGM +L Sbjct: 192 SLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + S T + + + +L ++ Sbjct: 252 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIV 311 Query: 341 RL 342 Sbjct: 312 GE 313 >gi|289625275|ref|ZP_06458229.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647801|ref|ZP_06479144.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 529 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAVIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|271966104|ref|YP_003340300.1| inner-membrane translocator [Streptosporangium roseum DSM 43021] gi|270509279|gb|ACZ87557.1| inner-membrane translocator [Streptosporangium roseum DSM 43021] Length = 348 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 122/310 (39%), Gaps = 29/310 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y + ++ + G+ ++ G G ++L + IGAY + + Sbjct: 38 PFNASPYTNLQLTLVIALAVAIRGIDVLTGYAGQVTLGQSAFFGIGAYVGAYGFAHGWPA 97 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + ++ ++ G+I+ +P+++ RG + TL + + + I+ + +T G G Sbjct: 98 V-GGLLLAPILCAVAGVIVAIPAVRLRGFAFGVITLALPVVVVPLAIRLEGVTGGAVG-- 154 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 ++ S + + + Y ++L + + + L + A Sbjct: 155 ------------LAVSTISAPSWSGLADDQWQYLLVLAIGAVMFLLARNLLAGRVGRALT 202 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IR ++ A S+ + K+ AFA++SA+ G+AG + + I D + +I ++ Sbjct: 203 LIRTSEIAASSVGIPVQRYKILAFAIASAYGGVAGWLYLTAVRYIGVDSLALTLSISMLV 262 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +++GG+ S A I V + D + R +AL +V Sbjct: 263 ALVVGGVRSPLGCVIGAAFYILVPNIT--------------DRATPGRSALFFGVALLIV 308 Query: 332 ILMRSHSLLR 341 +LM + Sbjct: 309 LLMVPGGISG 318 >gi|213691027|ref|YP_002321613.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522488|gb|ACJ51235.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457081|dbj|BAJ67702.1| ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 371 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 105/335 (31%), Gaps = 34/335 (10%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + + L T Y + + L Y M A G+ + G G+L+L + + +GAY Sbjct: 18 IAAVALIILAPTVMSAYSLGLLSKYLCYAMVAVGIGLAWGQGGMLTLGQGLFFGLGAYVM 77 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 I L + ++ + FR + I + + + W Sbjct: 78 AIHLKIEELGPDAVPD---FMAQYGIDRLPGFWELFRNPVVTIIGVAVVPGAVAAALGWA 134 Query: 142 PITNGKAGIYVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 G G Y A + + FF + + + +Y Sbjct: 135 VFGRGVRGAYFAILSQALVAAFAVLLVGQSKTTGGTNGLNDFSGFFGYDLTDPANKRMIY 194 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y+ I W+R + + +RD + L K+ F++++ F G+ Sbjct: 195 YICAFCVLGMVLIADWIRHSFMGELIIGVRDQENRMKFLGYNPASIKVFTFSLAAVFAGI 254 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 GA F ISP +I++++ V++GG ++L T I+ Sbjct: 255 GGAMFVPVVGIISPSDIDVIPSIMMLAGVVIGGRSTLLGPVIGTLIIRFAETQLSEACPS 314 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + + LVI L Sbjct: 315 VWTYVE--------------GAIFILVIAFAPMGL 335 >gi|327191583|gb|EGE58595.1| ribose ABC transporter [Rhizobium etli CNPAF512] Length = 417 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 98/323 (30%), Gaps = 23/323 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R++ + + + V+ + + + + +QI I + A G++ V+ G Sbjct: 98 IRISMKEAGVAIALVLIVIFFSATAPYFATPENFLKIFVQIAINTVLASGMTFVILVGG- 156 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + L+ A+ + LS W I ++++ S G I+G + Sbjct: 157 IDLSVGSLLALCTVIGATIMIDPRLSPWAAIVLASLASMGTGAILGAINGWV-------- 208 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + ++ + V + + + F + IF+ Sbjct: 209 --CEKWKLPSFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWGIFPSIFLIA 266 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +++ + R T I N++A K++ F +S G+A Sbjct: 267 IVVVLVGWFVL-----RYTVFGRFVFAIGTNEEAVRLSGHEPKRYKIAVFTISGLTAGIA 321 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299 + + + + + I+ VI+GG S+ IL + Sbjct: 322 AMVYLLRLN-VGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIVGTLVGACILQVLSTGLQ 380 Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322 + + + Sbjct: 381 LLGADDNIKPIVIGAVIVLAVIL 403 >gi|294341018|emb|CAZ89413.1| High-affinity branched-chain amino acid transport system permease protein livH (LIV-I protein H) [Thiomonas sp. 3As] Length = 310 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 102/305 (33%), Gaps = 7/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + + L Sbjct: 8 IVNGLVLGSMYALIALGYTMVYGIVNLINFAHGDVMMVGALTAYTVFKVLDHVAPHLPGW 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ ++ +L + + +A L + LI ++ + + Sbjct: 68 LVVVIALIIAMLATGALNYFIERIAYRPLRNAPKLAP-LITAIGMSILLETLAMIIWGRD 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L+ ++ +L+ L A + + T + A R +N + Sbjct: 127 YKVFPSGLLPSNVINVGGIVITPVQIMILIVTAVLLAGLTWLINHTKLGRAMRATAENPR 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F SAF + + +AG + A+ + M F+ + + +LGG+ Sbjct: 187 VASLMGVNPNFVISSAFVIGAMLAAIAGVMWFANFATANFYM-GFTPGLKAFTAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +LS +L + L G + + I L LV+ +R Sbjct: 246 GNLSGAMLGGILLGLIEVLGAGYIGTLTGGVFG-----SNYQDIFAFIVLILVLTLRPQG 300 Query: 339 LLRLR 343 LL R Sbjct: 301 LLGER 305 >gi|158315382|ref|YP_001507890.1| ABC transporter related [Frankia sp. EAN1pec] gi|158110787|gb|ABW12984.1| ABC transporter related [Frankia sp. EAN1pec] Length = 873 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 95/269 (35%), Gaps = 13/269 (4%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y Y + + ++ G G+ S+ +AIGAY+ + + Sbjct: 29 LIPAYQTYSLALAATYAVLVLSVGLLAGWAGVWSVGHPALFAIGAYTAAYGSAHGWG-LE 87 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + + ++G CG +G +F Y+A+ TL S + ++ +W +T G G+ V Sbjct: 88 VTVLAAMALAGTCGAFLGFAGARFSVLYIALLTLAFSLVALEVINRWTGVTGGDQGVPVL 147 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + LG ++ V + + L R + Sbjct: 148 ELSSVLGLGSLGGGSAEAIDAAIVTAGVMLTVAALA------------RPMGLRMRMVAA 195 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 + + A S+ AF S A G+AG A +SP+ F I I+ Sbjct: 196 KSHPLAARSIGIAPEAQTALAFGASGAAAGLAGVLLALITGYVSPESFSLVFGINTIAAA 255 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMN 302 +LGG+ +++ A + L + Sbjct: 256 VLGGVGTIAGAVVGGAFMAWSPTLADDIG 284 >gi|256157389|ref|ZP_05455307.1| hypothetical protein BcetM4_00796 [Brucella ceti M490/95/1] gi|256253632|ref|ZP_05459168.1| hypothetical protein BcetB_04939 [Brucella ceti B1/94] gi|261220769|ref|ZP_05935050.1| inner-membrane translocator [Brucella ceti B1/94] gi|265995875|ref|ZP_06108432.1| inner-membrane translocator [Brucella ceti M490/95/1] gi|260919353|gb|EEX86006.1| inner-membrane translocator [Brucella ceti B1/94] gi|262550172|gb|EEZ06333.1| inner-membrane translocator [Brucella ceti M490/95/1] Length = 331 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 25 LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGYAAFF 80 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 81 GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328 >gi|84683938|ref|ZP_01011840.1| branched-chain amino acid ABC transporter, permease protein [Maritimibacter alkaliphilus HTCC2654] gi|84667691|gb|EAQ14159.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2654] Length = 409 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 111/366 (30%), Gaps = 36/366 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + +L + + + F S ++ ++G + L + A + ++ G G+LSL Sbjct: 15 FLAVLAVFTIAITFMSEAFGAGVISTSFVKTLG-KTLCLALVAVAMDLIWGYAGILSLGH 73 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISGACGMIMGLP 113 + +G Y + + ++ + + Sbjct: 74 FAFFGLGGYMIGMWLMYERTKEIVAGSMAGNPIPPTEQEIVDGIGTQIFGVVGSSEFPII 133 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY-----------------VADRL 156 + +L +A +++ ++ W + G+Y D Sbjct: 134 WMFADSLFLQLALVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDSG 193 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + L +S I+ ++ + W+ + R IRDN Sbjct: 194 LRGNNGLSGLQNLPGVTASQDFVSIWFFWASALALAVGYIFAAWIVSGKFGSVIRGIRDN 253 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++ KL F V++ G+AGA + I+P +I + V +G Sbjct: 254 EARVRFLGYSVEGYKLFLFTVTAMIAGIAGALYYPQAGIINPAEIAPIASIYLAVWVAIG 313 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G L + V G N + + T L+ ++ V L Sbjct: 314 GRGRLYGAVIGAVFVSLVSTFFTGGQAPDINLGF-YTIQWVDWWTILLGLSFVFVTLFAP 372 Query: 337 HSLLRL 342 + L Sbjct: 373 KGIGGL 378 >gi|271501423|ref|YP_003334448.1| inner-membrane translocator [Dickeya dadantii Ech586] gi|270344978|gb|ACZ77743.1| inner-membrane translocator [Dickeya dadantii Ech586] Length = 295 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 121/312 (38%), Gaps = 19/312 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +++ + IY + A L++ G GLL+ ++ GAY+ + +GL +WL+ Sbjct: 2 SEFLLHILCLGGIYAIVALALNLQAGYAGLLNFGHIVFVGTGAYAIGLGS-HFGLPLWLV 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 IP + + ++M L + DY IATL ++EI + ++ +T G GI Sbjct: 61 IPGGLLCALVISVLMTLLGRQLTADYWGIATLALAEIIRIAVVNEDRLTGGAQGIGGLSA 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 V ++L ++ L + + A R +R+ Sbjct: 121 P--------------WSTGDTVADTRIFAVIILLCVIIATLASLRIGTSRFGRALRLMRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + +++ K A S+ +AG A D +SPD SE ++ S+V++ Sbjct: 167 QPQLAICMGYALLWLKCRALMSSAVMCCLAGMLLAWYTDYVSPDYLLSSETFLIWSMVMI 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ + ++ G+ Y+ S +++ L L R Sbjct: 227 GGIGNVRGVLLGVLLVEGLYNFIPFAKDYFQISSDLTGALRLGLVGLALLLCL----LTR 282 Query: 336 SHSLLRLRTPSN 347 LL + + Sbjct: 283 PGGLLPEKLRTL 294 >gi|158339064|ref|YP_001520241.1| branched chain amino acid ABC transporter permease [Acaryochloris marina MBIC11017] gi|158309305|gb|ABW30922.1| branched chain amino acid ABC transporter, permease protein [Acaryochloris marina MBIC11017] Length = 368 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 95/306 (31%), Gaps = 17/306 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ V LL + + S+ ++L++ L +V G G+LS + + + Sbjct: 17 LVVVSGISLLIFTILPFTLNSFQLSLMSKLLLFGTLGVSLDLVWGFTGILSFAHGVFFTL 76 Query: 77 GAYSYVILGSR-------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G Y+ +W + F L Sbjct: 77 GGYASAYYLKLNLSAASNTYGGELPDFMVWNGLEKLPWFIAPLKHFPVALVATFAVPALF 136 Query: 124 IATLIMSEIFQNI----LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 + + + + + + + G T + Sbjct: 137 AYIIGYFIFRSKVSGVYITIITLAISSALTTFFISQQAYTGGTNGITDVSSLRFFGVQVK 196 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 I +Y+++L ++ +L ++ R+I +N+K L + K+ + +S+ Sbjct: 197 PIGLYFLILAYAAFVIALSWFLTQSNFGLILRSINENEKRISFLGYDVAQFKIFIWTLSA 256 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A G+AG F ISP + V+ V +GG S+ A +L V Sbjct: 257 AIAGVAGGLFVPLNRFISPVYLAVAFGTQVVIWVAIGGRGSIVGPLVAAILLGQVQNYAE 316 Query: 300 GMNFYY 305 + + Sbjct: 317 KVTQDW 322 >gi|302386473|ref|YP_003822295.1| inner-membrane translocator [Clostridium saccharolyticum WM1] gi|302197101|gb|ADL04672.1| inner-membrane translocator [Clostridium saccharolyticum WM1] Length = 294 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 99/307 (32%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + +Y + A G ++V G +L+ IG Y + S GL I Sbjct: 6 SYFINGLSLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGGYVVFTVVSTMGLGPVAGI 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ ++ G+++ + + +A LI + +L + G + Sbjct: 66 LLAVILCTVLGVVIEGVAYRPLRMASPLAVLITAIGVSYLLQNIALLVFGSNPKSFTSVV 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + ++ + + +++RT A + ++ Sbjct: 126 TVPALKLSE---------GKLTISGETIVTIISCVIIMVGLTAFIKRTRAGQAMLAVSED 176 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +AGA ++ ++P I + G Sbjct: 177 KGAAQLMGINVDGTIALTFAIGSALAAVAGALLCSAYPTLTPYT-GSMPGIKAFVAAVFG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + + F L +V+L++ Sbjct: 236 GIGSIPGAFIGGLLLGVIENLSKAYISSQLSDAIVFG-------------VLIVVLLVKP 282 Query: 337 HSLLRLR 343 +L + Sbjct: 283 TGILGKK 289 >gi|296447074|ref|ZP_06889007.1| urea ABC transporter, permease protein UrtC [Methylosinus trichosporium OB3b] gi|296255419|gb|EFH02513.1| urea ABC transporter, permease protein UrtC [Methylosinus trichosporium OB3b] Length = 380 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 100/342 (29%), Gaps = 23/342 (6%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDS-----MGIQILIYVMFAWGLSIVVGSLGL 65 + AV++ + F L ++ S + ++ Y M A + +V G G+ Sbjct: 20 WCAFALGAAVIFIVAPFANLATAEASMLHLSDASIALAGKLFCYAMLALAMDLVWGYAGI 79 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSI---------------WLLIPVSAMISGACGMIM 110 LSL + +A+G Y++ + R W P + + Sbjct: 80 LSLGHGVFFALGGYAFGMYLMRQIGHDGSYHADLPDFMVFLDWKAFPWFWAFTDHFAYAI 139 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 L L A + + A + + R F Sbjct: 140 ALAILAPAALAFAFGFFAFRSRIKGVYFSIITQALTYAMMLLFFRNETGFGGNNGFTDFK 199 Query: 171 RFPSSFVIYEIFMYYVLL---GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 R + + + L + ++ + + IR+ + Sbjct: 200 RILDYPLATPQTRIILFMLSGASLLLLLLVSRFIVTSKLGRVLTAIREAESRVMFCGYDT 259 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + KL+ + S+A G+AGA + I+P + +I + +GG +L Sbjct: 260 LSYKLAIWTFSAAICGLAGALYVPQVGIINPSEMSPAASIEIAIWTAVGGRGTLIGPLVG 319 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++ G L Y+ L VI L Sbjct: 320 AVVVNGAKSLFTAAIPEYWLFFLGLLFVLVTLLLPKGVIGLV 361 >gi|213969636|ref|ZP_03397772.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301384778|ref|ZP_07233196.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302130816|ref|ZP_07256806.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925732|gb|EEB59291.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 391 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 103/353 (29%), Gaps = 36/353 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ ++ L L + + +M + L Y A GL + G G+LSL + + Sbjct: 13 GVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFG 72 Query: 76 IGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 +G Y + + ++ + + S+ Sbjct: 73 LGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQITELPALWVPFHSFTFSVFAVIAV 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA--------DRLYFLGTTVRSLIRFFRFP 173 + I+ + + I + L + + + Sbjct: 133 PVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGINGITDIKTLLGWD 192 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 ++ +Y+V G+ I ++ + + +RD ++ + K+ Sbjct: 193 IRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERVRFSGYDVAGFKIF 252 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + V++ F + GA FA +SP +I ++ +GG SL + ++ Sbjct: 253 VYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGSLLVNY 312 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 F SF LM V++ L L Sbjct: 313 GKTY--------------FSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESH 351 >gi|170723795|ref|YP_001751483.1| urea ABC transporter permease UrtB [Pseudomonas putida W619] gi|169761798|gb|ACA75114.1| urea ABC transporter, permease protein UrtB [Pseudomonas putida W619] Length = 495 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 222 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRYAPGAIEFYPLIALPVAFAVSAGVGMA 281 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W I + + + + + + Sbjct: 282 LER--TVIRHLYGRPLETLLATWGISLMLIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 339 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + L L RT + R + N+ + + AF + Sbjct: 340 VLPYNRLVIIAFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 399 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L +L Sbjct: 400 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 457 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 458 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 492 >gi|77463870|ref|YP_353374.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77388288|gb|ABA79473.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 410 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 98/353 (27%), Gaps = 36/353 (10%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L G + L + A + +V G G+LSL + +A+G Y + Sbjct: 28 LASHAYGTAFLSTSFVKTLGKTLCLCLVALAMDLVWGYAGILSLGHMAFFALGGYMIGMW 87 Query: 85 GSRYGLSIWLL-------------------------------IPVSAMISGACGMIMGLP 113 ++ +P + + + + L Sbjct: 88 LMYARTEDIVVQALSNAPLPATPQEISDGVASQIFGVVGGAELPAVWAFAHSLPLQLALV 147 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L L L + + A + L P Sbjct: 148 VLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALALHLFQNDAGLRGNNGLSGLQNIP 207 Query: 174 SSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + ++ ++ G L + W+ + R IRD+++ L ++ Sbjct: 208 GLVQVSQDRLSVWFFWASAGALALGYLLAAWIVSGKFGSVLRAIRDDEQRVRFLGYSVEG 267 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL F +++ +AGA + I+P +I + V +GG L A Sbjct: 268 YKLFIFTLTAVIAAIAGALYYPQAGIINPAELAPIASIYLAVWVAIGGRGRLYGAVIGAA 327 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + G + + L+ +A LV L + L Sbjct: 328 FVSLLSTWFTGGRAPDLSLGFA-TIQWVDWWQILLGLAFVLVTLFAPQGIGGL 379 >gi|49481170|ref|YP_036102.1| branched chain amino acid ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|229090951|ref|ZP_04222175.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock3-42] gi|301053495|ref|YP_003791706.1| branched chain amino acid ABC transporter permease [Bacillus anthracis CI] gi|49332726|gb|AAT63372.1| branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|228692352|gb|EEL46087.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock3-42] gi|300375664|gb|ADK04568.1| branched chain amino acid ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 333 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 129/325 (39%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T ++ + +V+L+ L+ Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311 >gi|320330449|gb|EFW86428.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 529 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 77/288 (26%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G G++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLPGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|298488924|ref|ZP_07006948.1| Urea ABC transporter, permease protein UrtB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156599|gb|EFH97695.1| Urea ABC transporter, permease protein UrtB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 529 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAVIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|170699138|ref|ZP_02890192.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|170135933|gb|EDT04207.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] Length = 358 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 105/302 (34%), Gaps = 12/302 (3%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + + + Y S LI + ++ G G+L+L + +GAY + Sbjct: 30 VAIAVAAVILPLCLGSYQLSTVRDALIMGLLGLSYDLLWGRAGVLTLGHTTFFGLGAYGF 89 Query: 82 VILGSRYGLSIWLLIPVSAMISGAC--GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +++G + + + V + + + + L R + AI ++ + I Q + Sbjct: 90 AVATTQFGQTPAIGLVVGVICAMSVAAMLGYFLLFAGVRLHFFAIISMAVLIIAQQLATS 149 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W+ +T G G+ L F + +Y + + + S+ Sbjct: 150 WQSVTGGDTGMLSIPGLSFTLAGYT----------VDLSGPRASWYAVATVLLVGLSVTW 199 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + R+ I N+ + + L F VS+ +AGA AA ++PD Sbjct: 200 FACRSQYGKILAAIATNEWRAQACGYHTSWHLLRVFVVSAGMAAIAGALMAACSGVVAPD 259 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 +F VI V +GG +L A L + + ++ +L + Sbjct: 260 VFSPVLATEVILWVAVGGRGTLGGPVAAAVALTLFKQSVSSFSTEWWPLMLAALFLGCIL 319 Query: 320 HT 321 Sbjct: 320 FL 321 >gi|172060386|ref|YP_001808038.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] gi|171992903|gb|ACB63822.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] Length = 408 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 99/293 (33%), Gaps = 12/293 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V + Q V+ A ++ +G+ GLLS +GA+ Sbjct: 12 WVLFAACVALPAWLWPHGAMLGYLAQTAALVVLALSYNLQLGTTGLLSFGHAAYAGLGAF 71 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + G + LL V + G I GL + + G A+ TL ++E Sbjct: 72 AAAHWFNHVGGLLPLLPLVGGVAGAGFGFIAGLLATRRAGTVFAMITLGLAECVAAAAWS 131 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 G G+ + + Y V+ C +SA + Sbjct: 132 VPAWFGGLGGVPI------------DRASGTPWGGWHFGAPAQAYTVIAAWCIVSAMAMH 179 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L RT ++ +RDN +L T +L+ +S F G+AG + +PD Sbjct: 180 ALTRTPLARLANAVRDNPARVAALGTEPRRVRLAMVTCASFFAGIAGTLTLIDVEIATPD 239 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + + V+ ++GG + A +L + + G++ + L Sbjct: 240 SLSMARSATVLIAAVIGGTGTFFGPAAGAVVLTALSVVVAGVSRAWALYLGVL 292 >gi|319762511|ref|YP_004126448.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330825639|ref|YP_004388942.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317117072|gb|ADU99560.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329311011|gb|AEB85426.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 322 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 115/313 (36%), Gaps = 30/313 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + + I+ +FA G V G+LG++S +G Y+ + +YGL Sbjct: 22 PFLHPGEALIQLVTLAAIWAIFAIGFDFVFGALGMVSFGHATFLGVGGYAVALATQKYGL 81 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKWKPITNGKAG 149 + ++ ++ A ++ +L+ G + A+ TL +S++ + K + T G G Sbjct: 82 PFSAGVGLAVIVGAAFALLFSFFALRVSGIFFALVTLALSQLIFILADSKLRGFTGGSDG 141 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 I +R F + Y+ +LG+ L ++ LR + Sbjct: 142 ISGVERP--------------GFLGIDFYDPVHYYWFVLGVYALVMLAVISLRSSPFGRV 187 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 IR N+ L + K F +S G+AGA A+ ++P M ++ + V Sbjct: 188 IAAIRGNETRADQLGFNVNRYKQITFVISGGLSGLAGALLASLLMYMNPQMLHWTTSGDV 247 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 I + ++GG SL + E Y++ ++ + Sbjct: 248 IIMTLVGGSGSLWGATVGVIAFEVLKEWLSSWTEYWYG---------------VLGLVFI 292 Query: 330 LVILMRSHSLLRL 342 L + ++ Sbjct: 293 LATIFFPRGIVGE 305 >gi|297571277|ref|YP_003697051.1| inner-membrane translocator [Arcanobacterium haemolyticum DSM 20595] gi|296931624|gb|ADH92432.1| inner-membrane translocator [Arcanobacterium haemolyticum DSM 20595] Length = 552 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 32/325 (9%), Positives = 89/325 (27%), Gaps = 9/325 (2%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F L+ Y I+ + + L + + + ++ Q + A G++ ++ Sbjct: 222 FLLKNGLYIVIVLIFIALAILAPITKSVDLFTTQNVLNILQQASPRMFLALGVAGLILLT 281 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G L+ +G ++ + + + A + + Sbjct: 282 G-TDLSIGRMVGMGMVIATVIMHKGPNTG--SVFGYAFDFTWMPLSGRIIFALIACIIAT 338 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 +++ F ++ + + + + V P+ V Sbjct: 339 TLFTMIAGFFTARFKMHPFVSTMANMLIIFGLVTYATKGVSFGAIEPDIPNMIVPNVSGF 398 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 ++L + + +T + N +A ++ + AF ++ G Sbjct: 399 PTIILWAVAATVVVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFKVTMGAFILAGILYG 458 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297 AA + ++ I+ ++ GG+ +S + I G+ Sbjct: 459 FGSWLEAARMFGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGRISGVVVGVMIFTGLTYS 518 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322 + + T Sbjct: 519 LTILGIDTNLQFVFEGIIILAAVTL 543 >gi|6690694|gb|AAF24262.1| Orf410 [Rhodobacter sphaeroides] Length = 410 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 95/332 (28%), Gaps = 36/332 (10%) Query: 46 ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL---------- 95 L + A + +V G G+LSL + +A+G Y + ++ Sbjct: 49 TLCLCLVALAMDLVWGYAGILSLGHMAFFALGGYMIGMWLMYARTEDIVVQALSNAPLPA 108 Query: 96 ---------------------IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +P + + + + L L L L Sbjct: 109 TPQEISDGVASQIFGVVGGAELPAVWAFAHSLPLQLALVVLVPGLLALVFGWLAFRSRVT 168 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI----YEIFMYYVLLGM 190 + + A + L P + ++ ++ G Sbjct: 169 GVYLSILTQAMTLALALHLFQNDAGLRGNNGLSGLQNIPGLVQVSQDRLSVWFFWASAGA 228 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L + W+ + R IRD+++ L ++ KL F +++ +AGA + Sbjct: 229 LALGYLLAAWIVSGKFGSVLRAIRDDEQRVRFLGYSVEGYKLFIFTLTAVIAAIAGALYY 288 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 I+P +I + V +GG L A + + G + Sbjct: 289 PQAGIINPAELAPIASIYLAVWVAIGGRGRLYGAVIGAAFVSLLSTWFTGGRAPDLSLGF 348 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L+ +A LV L + L Sbjct: 349 A-TIQWVDWWQILLGLAFVLVTLFAPQGIGGL 379 >gi|331017301|gb|EGH97357.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 391 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 103/353 (29%), Gaps = 36/353 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ ++ L L + + +M + L Y A GL + G G+LSL + + Sbjct: 13 GVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFG 72 Query: 76 IGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 +G Y + + ++ + + S+ Sbjct: 73 LGGYCIAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPALWVPFHSFTFSVFAVIAV 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA--------DRLYFLGTTVRSLIRFFRFP 173 + I+ + + I + L + L + Sbjct: 133 PVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGINGITDLKTLLGWD 192 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 ++ +Y+V G+ I ++ + + +RD ++ + K+ Sbjct: 193 IRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERVRFSGYDVAGFKIF 252 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + V++ F + GA FA +SP +I ++ +GG SL + ++ Sbjct: 253 VYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGSLLVNY 312 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 F SF LM V++ L L Sbjct: 313 GKTY--------------FSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESH 351 >gi|329917231|ref|ZP_08276455.1| ABC-type transporter, permease component: HAAT family [Oxalobacteraceae bacterium IMCC9480] gi|327544598|gb|EGF30078.1| ABC-type transporter, permease component: HAAT family [Oxalobacteraceae bacterium IMCC9480] Length = 387 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 66/325 (20%), Positives = 137/325 (42%), Gaps = 20/325 (6%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 + + A ++ + M +L+Y GL++ G G+ + + IG+Y+ ++ Sbjct: 79 ILALVAAFYNEHFALLMICTVLLYTTACLGLTLQFGFSGVANFAGAAFFGIGSYTTAVMV 138 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + G+ L+I +S +++ G ++ LP L+ RG Y A+ T+ + I+ + Sbjct: 139 THTGVPHLLVIVLSGLMAALIGSLLILPVLRTRGHYAALVTIAF-GLLFKTFIEVNDVLG 197 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G G+ V F F + + + + M I+ L R+ Sbjct: 198 GPQGLQVPGMKLFGLAFNDG----FSLFGIDFSFYVSYALLSVAMAAGVFVIVKALERSW 253 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 I + +R ++ A + I K+ AF + + F G+AG+ +A ++P+ F F++ Sbjct: 254 IGLSMDVVRTDETAAATFGLHIARWKVVAFMMGNFFAGIAGSVYAMLMGFVAPNNFTFAD 313 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 +++++SIVILGG+ + + A I++ + E + Y Sbjct: 314 SLLMLSIVILGGLGNPLGLIPAAIIVLVLPEKLQFIQEY---------------RYLFYG 358 Query: 326 IALFLVILMRSHSLLRLRTPSNFLE 350 + + ++L R LL +T F Sbjct: 359 VLVIAILLFRPDGLLPRKTRLFFQR 383 >gi|257483303|ref|ZP_05637344.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 529 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|33593706|ref|NP_881350.1| putative ABC transport protein, inner membrane component [Bordetella pertussis Tohama I] gi|33563779|emb|CAE43021.1| putative ABC transport protein, inner membrane component [Bordetella pertussis Tohama I] gi|332383109|gb|AEE67956.1| putative ABC transport protein, inner membrane component [Bordetella pertussis CS] Length = 309 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 97/305 (31%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G +GL++ IGA + ++ + Sbjct: 8 IINGLTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATMVAAALVGGDPSTSAF 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +G ++ + +A + + + + Sbjct: 68 AVLGAGL--LVSVPLCMAVGWTAERVAYRPLRRAPRLAALITAIGVSIILQNVAMMVWGR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ F + +++ + +++L + +T + A R N++ Sbjct: 126 NYLNFPQVLTPTVFEIGGARMSMLQIAIVVIAALIMGALLLVVHKTRLGTAMRATAQNRE 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I +AF + SA +AG +S F + + +LGG+ Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAIAGMMVTTYYG-VSQYTMGFMLGLKAFTAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G L + + L +V++ R Sbjct: 245 GNLVGAMAGGLLLGIIESLGSGYIGDLTGGFLG-----SHYQDVFAFVVLVMVLIFRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|187476699|ref|YP_784722.1| branched-chain amino acid ABC transporter permease [Bordetella avium 197N] gi|115421285|emb|CAJ47790.1| putative branched-chain amino acid ABC transporter permease [Bordetella avium 197N] Length = 354 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 139/343 (40%), Gaps = 23/343 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ L ++ + F+ + A S + ++ I LI + A GL+I+VG Sbjct: 18 QIFPIRQDR------LFFLLLMAVAFVAVPALASDYLLRAILIPFLILALAAVGLNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY+ I G + L I + + G++ G+PSL+ RG Sbjct: 72 YCGQISLGTGAFMAVGAYAAWNIGVRFPGAPLLLQILIGGGFATLVGIVFGIPSLRIRGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ TL ++ TN + V+ V Sbjct: 132 YLAVTTLAAQFFIDWAFLRIPFFTNYSSSGNVSVPPLTAF-------------GIPVQSA 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +L + + + L R AI W IRD A + ++AKLSAFAVSS Sbjct: 179 LEKYLFVLILVVVFTLLAKNLVRGAIGRQWMAIRDMDVAAAVIGIRPVYAKLSAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +G+AGA + P F + + ++ ++I+GG+ S+ A ++ V Sbjct: 239 IVGVAGALWGFIHLGSWEPLAFDLNRSFQLLFMIIIGGLGSIIGSFFGAAFIVLVPVALT 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L + + + ++ H L RL Sbjct: 299 NV--PHLLGLTLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339 >gi|320160699|ref|YP_004173923.1| branched-chain amino acid ABC transporter permease protein [Anaerolinea thermophila UNI-1] gi|319994552|dbj|BAJ63323.1| branched-chain amino acid ABC transporter permease protein [Anaerolinea thermophila UNI-1] Length = 375 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 107/353 (30%), Gaps = 40/353 (11%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ L L + + + + +Y + A G ++V G + L++ + +GA Sbjct: 34 VAIWRLGNALLENPSLFLQQVTNGLQIGFVYALIALGYTMVYGIVRLINFAHGDVFMVGA 93 Query: 79 YSYVILGSRYGLSIW--------------------LLIPVSAMISGACGMIMGLPSLKFR 118 ++ SR L +W +++ + + I + R Sbjct: 94 FTSFYAISRMQLHLWPRVLFPNLNPFLGDAIGTVTVVLLSMVVCALLAVTIERVAYKPLR 153 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF------ 172 A + + + A R + + T V Sbjct: 154 NAPRISALITAIGVSFFLEYFGALNFVYTANYITYRRPFDVVTWVIGNQGVQVLQRGQEV 213 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 P +I+ + +++ L + +++ T A R +++ + + Sbjct: 214 PPGAIIFSNISFIIIIVSIILLVLLQYFVKNTRTGKAMRATAYDRQTARLMGVDVDATIS 273 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 + FA+ +A G AG +A + ++ M + +LGG+ S+ IL Sbjct: 274 TTFAIGAALAGAAGVLYAIAYPQVVFWM-GIIPGLKAFVAAVLGGIGSIPGAVVGALILG 332 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L + F L +V+L+R + Sbjct: 333 QAETLSAAYISTPMRDAIAFS-------------ILIIVLLVRPTGIFGEAQR 372 >gi|309781875|ref|ZP_07676608.1| urea ABC transporter, permease protein UrtC [Ralstonia sp. 5_7_47FAA] gi|308919516|gb|EFP65180.1| urea ABC transporter, permease protein UrtC [Ralstonia sp. 5_7_47FAA] Length = 389 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 97/357 (27%), Gaps = 32/357 (8%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 ++ + LL Y ++ +I+ Y + A L +V G G+LSL + Sbjct: 29 SLIVCIGAPVCALLVPEGSPLHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGL 88 Query: 73 AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 +A+G Y + +++ L Sbjct: 89 FFALGGYGMGMYLMRSIGREGVYKSDLPDFMVFLDWKELPWFWHGTEHFAWAMLLVILVP 148 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + A + +I + + + R FP Sbjct: 149 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 208 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 S + ++ L+ + + IRD + + KL Sbjct: 209 SALPTRTVLFVATFVALVLAFIACRAIVTSKFGRVVTAIRDAEARVMFSGYNPLGYKLFV 268 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 + S+ G+AGA + I+P +I + V +GG +L ++ G Sbjct: 269 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPIIGAFLVNGA 328 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L ++ LV L + +L L + +R Sbjct: 329 KTLLTAW--------------VPEYWLFVLGAIFVLVTLYLPNGVLGLMSKLRMKKR 371 >gi|77456817|ref|YP_346322.1| inner-membrane translocator [Pseudomonas fluorescens Pf0-1] gi|77380820|gb|ABA72333.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Pseudomonas fluorescens Pf0-1] Length = 500 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ + I +I+ + Sbjct: 227 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMFQRYAPQAIEFYPLIALPVAFFVTAAIGMA 286 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + + + + + Sbjct: 287 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRLVFGAQNVEVANPAWLSGGIQVLPNL 344 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 345 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 404 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 405 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVFAAFGLGIANKI 462 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 463 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 497 >gi|163798044|ref|ZP_02191984.1| acyl-CoA synthase [alpha proteobacterium BAL199] gi|159176701|gb|EDP61274.1| acyl-CoA synthase [alpha proteobacterium BAL199] Length = 337 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 98/282 (34%), Gaps = 20/282 (7%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 +G + I + A L++++G GL+S +A+G Y + +L Sbjct: 24 IGFGVDSAWPRDFLTSIFAIGLLAMSLNLLIGYTGLVSFGHAAFFALGGYIFGLLLQWGD 83 Query: 90 LS-------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + + + + + +++G ++ Y A TL ++++ W Sbjct: 84 FTATLGQGSVPVALLAAVAGTALYALVIGAICVRLTEIYFAFLTLAFQMFLYSVILSWVA 143 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G + I F + Y + + I+ + Sbjct: 144 LTGGDQG-------------LMGGIPRPVFLGVDLADPYHRYAFCAVIFVICMLIMRIVT 190 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + R IRDN + L + KL F VSS+ G+ G A P+ Sbjct: 191 ESPFGYTLRMIRDNAQRAAFLGVNVTRVKLICFVVSSSIAGVGGVILALFTSGAYPEWAF 250 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 ++++ I +++LGG+ L + ++ + Sbjct: 251 WAQSGEAIFMIMLGGLNVFLGPLLGAVALRILNDVVQMYTSH 292 >gi|160879407|ref|YP_001558375.1| inner-membrane translocator [Clostridium phytofermentans ISDg] gi|160428073|gb|ABX41636.1| inner-membrane translocator [Clostridium phytofermentans ISDg] Length = 291 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 105/306 (34%), Gaps = 26/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + Y + A G S+V G L L++ + YA GA++ ++L S + ++ Sbjct: 6 IFNGLTLGMCYALLAVGYSLVFGILRLVNFSHGSIYAFGAHTALLLVSMNLGIVPAVLLS 65 Query: 99 SAMISGACGMIMGLPSLKFRGDY-LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 +I R + IA+LI + NI+ + G Sbjct: 66 LVFTGLLGVLIDKTALEPLRKKNSIPIASLITTIGISNIIQNLLTVFFGSE--------- 116 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 +L F + + + L ++L +++T I A R N Sbjct: 117 --KKAFPALFNFGVISIGNIQITWTQICICIVSLGLMLLLVLVVKKTKIGLAMRGCEQNP 174 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 KA + + F F + +AGA + + P+M + + + +LGG Sbjct: 175 KAANLMGVNVNFVISFTFFLGGVSAAIAGALISGYYQIVYPNMGYMA-GLKAFAAAVLGG 233 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ ++ + + + F + L +V+++R + Sbjct: 234 IGSIPGALVGGLLVGVSESMAATFLGSTYRDCMAF-------------VILIIVLIVRPN 280 Query: 338 SLLRLR 343 L + Sbjct: 281 GLFGKK 286 >gi|77464866|ref|YP_354370.1| branched chain amino acid ABC transporter inner membrane protein [Rhodobacter sphaeroides 2.4.1] gi|77389284|gb|ABA80469.1| ABC branched chain amino acid family transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 310 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 116/326 (35%), Gaps = 28/326 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +LA+ +L + Y + +IL+ +A G +I G GLLSL + +A Sbjct: 3 MLALHLAVLAGIAALQFVLPAYHHTNAARILVLATYAIGFNIAFGYTGLLSLGHALFFAG 62 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y+ +L + G W + + G +GL +L+ G I TL+ ++ F Sbjct: 63 GMYATGLLIDQGGWQPWAALLAGPVAGGVLAAGVGLLALRTAGPAFMIVTLMFAQAFHLA 122 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ W T G G R + Y + + Sbjct: 123 ILYWGRFTGGDEG-------------FTLSGAARRIGPFDLADPTTRYGAAFLLFAAAML 169 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L L R+ +R+N++ L AKL A A+S G AGA + + Sbjct: 170 GCLALVRSRTGRVLIAVRENEERTRMLGYDTFRAKLLALALSGLLSGAAGATYGLMFGYV 229 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +I+ + V+LGG ++ TA+L +++ + Sbjct: 230 GGSFAAIQYSILPLIWVLLGGAGTVLGPLLGTALLFYLIDWASSV--------------- 274 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 ++ L L++L LL L Sbjct: 275 TTASQFVVGAVLILLVLFAPRGLLGL 300 >gi|311109347|ref|YP_003982200.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310764036|gb|ADP19485.1| inner-membrane translocator 68 [Achromobacter xylosoxidans A8] Length = 354 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 80/343 (23%), Positives = 139/343 (40%), Gaps = 23/343 (6%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 IF +R ++ + + + F+ + A S + ++ I LI + A GL+I+VG Sbjct: 18 QIFPIRQDR------IFIWLLLAVAFVAIPAMASDYLLRAILIPFLILALAAVGLNILVG 71 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120 G +SL A+GAY+ G R+ + I + + G+I G+PSL+ RG Sbjct: 72 YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLIIQILLGGFFATIVGVIFGIPSLRIRGL 131 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 YLA+ATL ++ TN + V+ V Sbjct: 132 YLAVATLAAQFFVDWAFLRIPFFTNYSSSGNVSVPPLTAF-------------GLPVQSA 178 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y +L + + + + L R AI W IRD A + ++AKL+AFAVSS Sbjct: 179 LEKYLFVLILVVVFSLLAKNLVRGAIGRQWMAIRDMDVAASVIGIRPMYAKLTAFAVSSF 238 Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +G+AGA + P F + + ++ +VI+GG+ S+ A ++ V Sbjct: 239 IVGVAGALWGYIHLGSWEPLAFDLTRSFQLLFMVIIGGLGSIIGSFFGAAFIVLVPVALS 298 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + ++ H L RL Sbjct: 299 NIPHAL--GIPLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339 >gi|293603966|ref|ZP_06686380.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292817659|gb|EFF76726.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 327 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 120/302 (39%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++I+ Y +FA ++++G GLLS AY+ +G + + Sbjct: 27 FAMKIMCYALFACAFNLLLGFTGLLSFGHAAFLGSAAYAAGHAMKVWGFPTEIGLLFGVG 86 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 ++ G+ MG +++ G Y A+ TL ++++ ++ T G+ G+ R Sbjct: 87 VAALLGLAMGAIAIRRSGIYFAMITLALAQMVFFFFLQA-KFTGGEDGLQSVPRGT---- 141 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + +I +YY+++ + + II + + +R+N+ Sbjct: 142 ---------LLGLVDLSKDINLYYLVMAIFVIGYFIIWRTVNSPFGQVLQALRENEPRAI 192 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+A G+AGA + + + +VI + ++GG+ +L Sbjct: 193 SLGYDVDRFKLLAFVLSAALAGLAGATKTLVFVSATLSDATWQMSGLVILMTLIGGLGTL 252 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + I++ + N + +++ T ++ + + +L ++ Sbjct: 253 TGPILGAFIVVLLENKVGDFGQMMANLTGVEWFLRLGESVTIVIGLIFVICVLAFRRGIV 312 Query: 341 RL 342 Sbjct: 313 GE 314 >gi|291457342|ref|ZP_06596732.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Bifidobacterium breve DSM 20213] gi|291381177|gb|EFE88695.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Bifidobacterium breve DSM 20213] Length = 307 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 103/303 (33%), Gaps = 13/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ +GAY +L +++ L V Sbjct: 11 LFNGLKIGSVYALVALGYTMVYGIIRLINFAHGDFIMVGAYVL-MLTIPAIVAMGLPAWV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + +G+ K + M+ + I + + Sbjct: 70 AVIPAILVCVAVGVIVEKAAYKPVREKGNSMTALITAIAMSLLLENGSQ------AIFGA 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 TV ++ + ++ + + L+++ T A R + ++++ Sbjct: 124 DFQTVPTIFHLPSIAFGKLKLSGDTLLTIVIGLVIMVGLQLFVKFTKQGKAMRAVSEDKE 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +A + A+ ++S M + +LGG+ Sbjct: 184 AAVLMGVNVNSTIALTFAIGSGLAAVASLMYCAAYPQVS-PMMGAMLGLKAFVAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + + L L+ S ++ L +V+L++ Sbjct: 243 GSIPGAMIGGLAIGLIESLTKAYIGTVTGGLITSAFSDA-----IVFAILIIVLLVKPSG 297 Query: 339 LLR 341 ++ Sbjct: 298 IMG 300 >gi|297194985|ref|ZP_06912383.1| high-affinity branched-chain amino acid transporter [Streptomyces pristinaespiralis ATCC 25486] gi|197721907|gb|EDY65815.1| high-affinity branched-chain amino acid transporter [Streptomyces pristinaespiralis ATCC 25486] Length = 338 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 88/310 (28%), Gaps = 18/310 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G L L++ + +GAY +I+ Sbjct: 39 DYLVLGVMLGSLYAVIAIGYTLVYGVLQLINFAHSEVFMLGAYGSLIVLQLVSPGDNPSA 98 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 S L +A + LI +Y Sbjct: 99 LASIGFVALAMAGSALFGGVTAYGLEKVAYRPLRRRGAPRLIFLITAIGASFFLYNLAGK 158 Query: 157 YFLGTTVRSLIRFFR---FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 F + + F I + ++ + + RT + R + Sbjct: 159 LFGRDPLPLPEMYDNHTVFSLFGAGVNITQMLQFATAVVMMVALDMLVTRTKLGKGIRAV 218 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 + + + I F + G+AG FA F I + Sbjct: 219 AQDAEVAGLMGVDIDKVISRTFIIGGVLGGVAGFLFANLNQV--SYTMGFIPGITAFAAA 276 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++GG+ ++ ++ V + + + S+ + L LV++ Sbjct: 277 VVGGIGNIRGAMFGGILIGIVETMTVPLLGDEWRSVSAM-------------VVLILVLM 323 Query: 334 MRSHSLLRLR 343 R +L R Sbjct: 324 FRPMGILGER 333 >gi|229820691|ref|YP_002882217.1| inner-membrane translocator [Beutenbergia cavernae DSM 12333] gi|229566604|gb|ACQ80455.1| inner-membrane translocator [Beutenbergia cavernae DSM 12333] Length = 328 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 113/304 (37%), Gaps = 8/304 (2%) Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113 GL+I G GL+++ +GAY + I +W + V+ +I+GLP Sbjct: 27 IGLNIHFGLTGLINMGQAGFMLVGAYGFGISTIAGWP-LWAAVLVAIGSGVVFALILGLP 85 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 +LK RGDYLAI T+ +EI + + + IT G+ + + Sbjct: 86 TLKLRGDYLAIVTIAAAEIVRLVGRSTALEDITGASNGLLGNSFKHTFQGASPFPDERWT 145 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSA----SIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 F + + L + + ++ L R+ + IR+++ A SL + Sbjct: 146 FLFLTLPVNASNSWWLRIVGWTLVALACFLVYLLIRSPWGRVLKGIREDEDAVRSLGKNV 205 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 K+ A + +AG F I PD +I++LGG ++ Sbjct: 206 YSYKMQALVLGGGLGALAGIIFVLP-GAIQPDSLGRPVTFYTWTILLLGGAATVFGPVLG 264 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + G + G+ + L+ I L L+++ R +L + Sbjct: 265 SMLFWGTLVFVRGLMRGVIPEQVMSVIEIEQFGWVLVGITLMLLVIFRPQGILGDKKELA 324 Query: 348 FLER 351 +R Sbjct: 325 IHDR 328 >gi|301631673|ref|XP_002944922.1| PREDICTED: hypothetical protein LOC100491990 [Xenopus (Silurana) tropicalis] Length = 2211 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 98/308 (31%), Gaps = 23/308 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + L + S + + M A +++ V G + L+ +A+ Sbjct: 1252 LTIAVFAAFALVIPGFASLASLRQLSTSFAEQAMVAVAMAVSV-LSGGIDLSVGAVFAMA 1310 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + + + + L++P + A G + G R + TL+M + + + Sbjct: 1311 NFLTLYTYLVKDMPLPLVVPGVVLFGAAMGAVNGALIAYGRTRPF-LTTLVMLIVLRALY 1369 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 K+ +T D + S + M +LL + Sbjct: 1370 NKFTAVTTDALASVAPDSPVWDFL----------GAGSLLGVPTNMVALLLIALSSHFFL 1419 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 R + ++KA + A+ +S A +AG F+AA ++ S Sbjct: 1420 ----TRLRPGVHIMAVGASRKAARHAGVNVQRTLFLAYVLSGALAALAGVFYAARQNS-S 1474 Query: 258 PDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 I ++ V+LGG+ ++++ AI+ +V + + Sbjct: 1475 GTDTGLGWEINALAAVVLGGISLAGGRGTIARAMMGAAIIFMLVSGLVRIGVSGNVTTAL 1534 Query: 312 FDCSFNMR 319 + Sbjct: 1535 LGLILLVA 1542 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 106/329 (32%), Gaps = 33/329 (10%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + ++ +L + A+V+ L+ L S + ++ I I + A G++IVV L Sbjct: 608 KPSQAMAVLGMCALVF-LVFSATLPGFLSLGNLLALSRNISILGVLALGMAIVV-IARGL 665 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L+ V A A VI+ + + + + + +++ A G + G L Sbjct: 666 DLSQVAVMACAAAVAVIVMNAGWPTP-VALALGLVMALAVGAVNGWLIAVVEMPPL---- 720 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + +G A + + V F + Sbjct: 721 -------------LTTLASGLAVLGLTRSTAVQHFVVNLGAGHEGFLQLGGNLPGGLPAP 767 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 L+ ++A + L L RT + DN + + +A+ +A +AG Sbjct: 768 LVVFTIVAAGVHLLLSRTVLGRFIYAHGDNPETARLTGLPTRPLTMLEYALCAAIAYIAG 827 Query: 247 AFFAASRDRISPDMFKFSENII------VISIVILGGMTSLSKIAKATAILIGVVELCCG 300 A + + + + + + + GG + + T ++ ++ Sbjct: 828 VVMVAQTALMHLQVAEGTLIFDVILVVVLGGVSLTGGRGHVGCVVVGTLLIGVLLNGMTI 887 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 M+ L ++ L+ + Sbjct: 888 MD-------LDIQTQNIVKGMVLLGAIVL 909 >gi|326794845|ref|YP_004312665.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326545609|gb|ADZ90829.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 322 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 113/303 (37%), Gaps = 11/303 (3%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L V+ L L + +Y + I+I +F L +VG GL++L + Y + Sbjct: 10 LFVWVFFPLALLMPMLLEQNEYYVNKLTTIMILSIFVMSLDYLVGKCGLITLGHAMFYGL 69 Query: 77 GAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 G Y +V++ Y ++ W+ IS ++G L+ G Y+ + TL +++ Sbjct: 70 GGYLFVMIAPEYEAVNFWVYTFYICAISSLVAFVIGFLVLRTSGIYMIMITLAFAQMTFY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 G G++V + F + YY+ L F S Sbjct: 130 YFSDSIDF-GGTDGVFVYVKPETS---------IFGLSLFDLDNPTHFYYLCLLSLFNSL 179 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 L R+ I N +L I +L ++ ++SA AG F Sbjct: 180 LFFKVLIRSRFGRLVDAIHVNPGRTVALGYNIFVYRLVSYVIASALGAYAGYLFTLQYGF 239 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P M ++ + + + ILGGM S+ T + G+ L + ++ + + Sbjct: 240 VNPSMLSWTTSGTALVMSILGGMGSIYGAILGTLVFEGLQYLLEHVTEHWLLFMGGLIIT 299 Query: 316 FNM 318 M Sbjct: 300 MVM 302 >gi|312958719|ref|ZP_07773239.1| inner-membrane translocator [Pseudomonas fluorescens WH6] gi|311287262|gb|EFQ65823.1| inner-membrane translocator [Pseudomonas fluorescens WH6] Length = 500 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ + I +I+ + Sbjct: 227 ITFGLLGVINMAHGEMLMLGAYSTYVVQLLMQRYVPAAIEFYPLIALPVAFFVTAAIGMA 286 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + + + + Sbjct: 287 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRLVFGAQNVEVANPQWLSGGIQVLPNL 344 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 345 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 404 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 405 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 462 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 463 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 497 >gi|23335566|ref|ZP_00120801.1| COG0559: Branched-chain amino acid ABC-type transport system, permease components [Bifidobacterium longum DJO10A] gi|23466260|ref|NP_696863.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium longum NCC2705] gi|189440754|ref|YP_001955835.1| branched-chain amino acid AbC-type transport system permease [Bifidobacterium longum DJO10A] gi|227546613|ref|ZP_03976662.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621644|ref|ZP_04664675.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312134007|ref|YP_004001346.1| livh [Bifidobacterium longum subsp. longum BBMN68] gi|317482076|ref|ZP_07941100.1| branched-chain amino acid transport system/permease component [Bifidobacterium sp. 12_1_47BFAA] gi|322689789|ref|YP_004209523.1| branched-chain amino acid ABC transporter permease [Bifidobacterium longum subsp. infantis 157F] gi|322691735|ref|YP_004221305.1| branched-chain amino acid ABC transporter permease [Bifidobacterium longum subsp. longum JCM 1217] gi|23327008|gb|AAN25499.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium longum NCC2705] gi|189429189|gb|ACD99337.1| Branched-chain amino acid ABC-type transport system permease component [Bifidobacterium longum DJO10A] gi|227212930|gb|EEI80809.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239515519|gb|EEQ55386.1| permease of ABC transporter for branched-chain amino acids [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516323|emb|CBK69939.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Bifidobacterium longum subsp. longum F8] gi|311773311|gb|ADQ02799.1| LivH [Bifidobacterium longum subsp. longum BBMN68] gi|316916435|gb|EFV37833.1| branched-chain amino acid transport system/permease component [Bifidobacterium sp. 12_1_47BFAA] gi|320456591|dbj|BAJ67213.1| branched-chain amino acid ABC transporter permease component [Bifidobacterium longum subsp. longum JCM 1217] gi|320461125|dbj|BAJ71745.1| branched-chain amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis 157F] Length = 308 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 103/303 (33%), Gaps = 13/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ +GAY +L +++ L V Sbjct: 12 LFNGLKIGSVYALVALGYTMVYGIIRLINFAHGDFIMVGAYVL-MLTIPAIVAMGLPAWV 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + +G+ K + M+ + I + + Sbjct: 71 AVIPAILVCVAVGVIVEKAAYKPVREKGNSMTALITAIAMSLLLENGSQ------AIFGA 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 TV ++ + ++ + + L+++ T A R + ++++ Sbjct: 125 DFQTVPTIFHLPSIAFGKLKLPGDTLLTIVIGLVIMVGLQLFVKFTRQGKAMRAVSEDKE 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +A + A+ ++S M + +LGG+ Sbjct: 185 AAVLMGINVNSTIALTFAIGSGLAAVASLMYCAAYPQVS-PMMGAMLGLKAFVAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + + L ++ S ++ L +V+L++ Sbjct: 244 GSIPGAMIGGLAIGLIESLTKAYIGTITAGIITSAFSDA-----IVFAILIIVLLVKPSG 298 Query: 339 LLR 341 ++ Sbjct: 299 IMG 301 >gi|320547327|ref|ZP_08041618.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448025|gb|EFW88777.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 294 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 105/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y +GA+ S ++ W+ + V Sbjct: 10 LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFIGYYSISVLHMNFWIALIV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ GM++ + + IA LI + L G Sbjct: 70 TMIVTAFIGMVIEFLAYRPLRHSTRIAALITAIGVSFFLEYGMVFLVGANTRS------- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + V +L L ++ L +++T + A R + + Sbjct: 123 ----FPQAVDIVSYKLGPVTVTNIQLLILAVSLVLMVALQLTVKKTKMGKAMRAVSVDSD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I P M + I +LGG+ Sbjct: 179 AAELMGINVNSTISFTFALGSALAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L +N + ++ L +++L+R Sbjct: 238 GIIPGAALGGFVIGILETLSISLN-------------LSSYRDAIVYGVLIIILLVRPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|299133678|ref|ZP_07026872.1| inner-membrane translocator [Afipia sp. 1NLS2] gi|298591514|gb|EFI51715.1| inner-membrane translocator [Afipia sp. 1NLS2] Length = 322 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 117/323 (36%), Gaps = 29/323 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V +++ + L A +Q L + +FA ++++G GLLS + Y Sbjct: 20 IVGFIVMAVLLAAVPLTGIYPYFVMQALCFSLFACAFNLLIGYSGLLSFGHSMFLGTAGY 79 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +G+ I + + +I G +++ +G Y A+ TL +S++ I ++ Sbjct: 80 FTAYSLKSWGVPPVAGILIGVFAAAVLSVITGAIAIRRQGIYFAMITLALSQLMFFIYLR 139 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G+ GI + G S +YY +L + L+ +I Sbjct: 140 AP-FTGGEDGIQGIPQGTLFGIFDLSHTN-------------TLYYFILSVFLLAFLLIH 185 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + ++IR+N+ SL + KL AF +S G+AG+ S Sbjct: 186 RIVNSPFGEVLKSIRENEPRAISLGYKVDQYKLMAFILSGTLAGLAGSLKMFVTQNASLT 245 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 ++ + V+ + ++GG+ + I++ + + Sbjct: 246 DVHWTMSGEVVLMTLVGGLGTSFGPIVGAFIIVAMQQYLASF---------------GQW 290 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 + + +L ++ Sbjct: 291 VMVMQGAVFIVCVLTFRRGIVGE 313 >gi|306834095|ref|ZP_07467215.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304423668|gb|EFM26814.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 294 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 104/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y +GA+ S ++ W+ + Sbjct: 10 LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFIGYYAISSLHMNFWIALIF 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + GMI+ + + IA LI + L G Sbjct: 70 TMIATACLGMIIEFLAYRPLRHSTRIAALITAIGVSFFLEYGMVFLVGANTHS------- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + V +L+ L ++ L +++T + A R + + Sbjct: 123 ----FPQAIDIVSYKIGSVTVTNIQLLILIVSLALMVALQLIVKKTKMGKAMRAVSVDSD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I P M + I +LGG+ Sbjct: 179 AAELMGINVNSTISFTFALGSALAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L +N + ++ L +++L+R Sbjct: 238 GIIPGAALGGFVIGILETLSISLN-------------LSSYRDAIVYGVLIIILLVRPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|301058601|ref|ZP_07199606.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] gi|300447333|gb|EFK11093.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] Length = 337 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 109/320 (34%), Gaps = 37/320 (11%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + ++ L L Y + + IY + A + +GL+SL +G Y Sbjct: 39 LILIVGMLALPLLMPGMYWQRVITIVCIYALLALSFDFLAHFVGLVSLGGAFFIGVGGYF 98 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 I + +G+ IP++ + ++ +P L RG Y AI TL+ + I+ Sbjct: 99 SAIFNASFGIPPLFSIPMATVSGAIVCTLLLIPCLPLRGVYFAIVTLMYPLALARV-IEA 157 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 I G GI D YV + + L + Sbjct: 158 TDILGGTDGIMGIDSFSNSWVEQ---------------------YVAIVLVLLFLFGLRR 196 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L T I R ++DN +A + ++ F K A ++S + GA + Sbjct: 197 LVNTDIGLVVRAVKDNDQAVRASGMSVNFYKAGAVFIASGIGCLGGACLVHIYMWAGISL 256 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F +I+ I+ ++GG +L IL+ + EL F Sbjct: 257 FALDFSILPIAATVIGGSGTLVGPVLGCLILVPISELLR---------------DFGTLR 301 Query: 321 TTLMVIALFLVILMRSHSLL 340 I L ++ RS L+ Sbjct: 302 IVFYAILLVCFVVFRSEGLM 321 >gi|16265263|ref|NP_438055.1| putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|15141403|emb|CAC49915.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 391 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 107/360 (29%), Gaps = 35/360 (9%) Query: 13 KILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 IL LAV+ P L L Y+ S+ + L Y + A L +V G G+LSL Sbjct: 19 AILLALAVIVPALNLLTAPEHPLHVPTYLVSLFGKYLTYALLALALDLVWGFCGILSLGH 78 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +A+G Y+ + R + LP + D A L++ Sbjct: 79 AAFFALGGYAMGMYLMRQIGARGSYGNPLLPDFMVFLNWKELPWFWYGFDMFWFAALMVV 138 Query: 131 EIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFR 171 + + + + D + + Sbjct: 139 LVPGLLAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILG 198 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F ++ +S + + R+ +RD + L + K Sbjct: 199 FNIQADGTRAALFAASALALAVSLVVTSGIVRSKFGKVLVALRDAESRTRFLGYRVEHMK 258 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L AF VS+ G+AGA + I+P F + +I V+ +GG +L ++ Sbjct: 259 LFAFTVSAMMAGVAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAILV 318 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 G + F +F + LV L ++ R Sbjct: 319 NGGKSI--------------FTAAFPEFWLFALGGLFVLVTLFLPKGVVGTAQSYLASRR 364 >gi|332161028|ref|YP_004297605.1| branched chain amino acid ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665258|gb|ADZ41902.1| branched chain amino acid ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 515 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 81/288 (28%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ S + + + +++ + Sbjct: 242 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQLAPHWLALYPLVALPVAFFITAGIGMA 301 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ + L + + + Sbjct: 302 LER--TVIRHLYGRPLETLLATWGISLMLIQGVRMIFGAQNLEVANPAWLSGGVQLLPNL 359 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + V+ + + L L +T + R + N+ + AF + Sbjct: 360 VLPWNRIAVIAFVVIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGKVDMLAFGL 419 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L + ++ Sbjct: 420 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 477 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 478 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 512 >gi|319763835|ref|YP_004127772.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330823901|ref|YP_004387204.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317118396|gb|ADV00885.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329309273|gb|AEB83688.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 308 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 109/311 (35%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G ++V G +G+++ Y IGAY+ ++ + + Sbjct: 12 LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYAGLVTLAAIGTQSGLPVAV 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I L++ V+ +++G G ++ + K + + LI + L W + G Sbjct: 72 IIALMLLVAVLVTGVYGFVVEQVAYKPLRNGPRLVALISAIGMSIFLQNWVALGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + + +RF V +++ L ++ L++R + + A Sbjct: 129 ----RDMAVPSLLPGALRFGDESGFEVFVPYTRVLIIVVTVVLMIALTLYIRHSRMGRAS 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + L + F + + + G A + +++ F + Sbjct: 185 RACSQDMHMAGLLGIDVNRVISFTFILGAVLAAVGGVLIALAVGKLN-PFIGFIVGVKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGVAETFAAAYISSEYKDIVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|302876895|ref|YP_003845528.1| inner-membrane translocator [Clostridium cellulovorans 743B] gi|307687581|ref|ZP_07630027.1| inner-membrane translocator [Clostridium cellulovorans 743B] gi|302579752|gb|ADL53764.1| inner-membrane translocator [Clostridium cellulovorans 743B] Length = 300 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 94/303 (31%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ + +GAY + + ++ + V Sbjct: 13 LVNGISLGSLYALIAIGYTMVYGILRLINFAHGDIFMMGAYFAFYSIVVFSMPWYVAVIV 72 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+++ + K + + LI + +L + G Sbjct: 73 AIAVTSVLGIVIERAAYKPLRNAPKTSILISAIGVSFLLESVATVAFGGTPKSFP----- 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + V + + + L ++ + RT + A R + + + Sbjct: 128 -----QIALFTDNITIGSVTMQKLTVIIPVVTIILLVGLLYLVNRTKVGMAMRAVSRDYE 182 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ F + S + G + + + I ++GG+ Sbjct: 183 TSALMSINTNRIISLTFVIGSLLASVGGVMWGLKYTTL-LPLMGLMPGIKCFIAAVIGGI 241 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + IL + + F I L +++L++ Sbjct: 242 GDIKGAVLGGFILGLTEVML-----------VAFAPGLTGYRDAFAFILLIVILLVKPEG 290 Query: 339 LLR 341 ++ Sbjct: 291 IMG 293 >gi|225350884|ref|ZP_03741907.1| hypothetical protein BIFPSEUDO_02458 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158340|gb|EEG71582.1| hypothetical protein BIFPSEUDO_02458 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 309 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 104/304 (34%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G + L++ +G+Y+ +L + ++ L Sbjct: 13 IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYAL-MLTIPFIIACGLPAWF 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + +G+ + + M+ + I + + Sbjct: 72 AVIPAVLVCVAVGIIVERAAYKPVREKGNNMTALITAIAMSLLLENGSQ------ALFGA 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 TV +++ + + +L + ++ L++ T A R + ++++ Sbjct: 126 DYQTVPTIVEIPTLVLGKLKIDGATIITVLLGIAIMVALQLFVSLTKQGKAMRAVSEDKE 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +A + S ++S M + +LGG+ Sbjct: 186 ASILMGINVNSTITLTFAIGSGLAAVAALMYCISYPQVS-PMMGAMLGLKAFVAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ L ++ S ++ L +V+L++ Sbjct: 245 GSIPGAMVGGLLIGVAESLTKAYIGTITAGVITSAFSDA-----IVFGILIIVLLVKPSG 299 Query: 339 LLRL 342 L+ Sbjct: 300 LMGE 303 >gi|283785219|ref|YP_003365084.1| branched-chain amino acid transport system, permease component [Citrobacter rodentium ICC168] gi|282948673|emb|CBG88265.1| putative branched-chain amino acid transport system, permease component [Citrobacter rodentium ICC168] Length = 357 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 96/333 (28%), Gaps = 27/333 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L + ++ +IL Y + A L +V G G+LSL I +A+G Y+ Sbjct: 33 FLALLPAEHPLAISVWTLTLTGKILCYAVVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92 Query: 83 IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + S + ++ L + A Sbjct: 93 MYLMRQAAGEGLPAFMSFLSWTELPWFWWGTQHFAWAMALVILLPGLLALIFGWFAFRSK 152 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + ++ G + + + P + + ++ + Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGLPITATSTRVGLFLASVL 212 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L+ + L R+ +RD + +L + +S+ G+AGA + Sbjct: 213 LLVLALWLGFALARSKFGRILTAVRDAENRLMFCGYDPKGFRLLVWTLSAMLCGLAGALY 272 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I+P + +I V LGG SL ++ G L Sbjct: 273 VPQVGIINPGEMSPTNSIEAAIWVALGGRGSLIGPVIGAVMVNGAKSL------------ 320 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + + +V L ++ L Sbjct: 321 --FTVIMPEYWQLFLGLIFIVVTLFLPRGVIGL 351 >gi|317405255|gb|EFV85589.1| branched-chain amino acid transport system [Achromobacter xylosoxidans C54] Length = 375 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 94/339 (27%), Gaps = 32/339 (9%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 F Y ++ + + Y + A L +V G G+LSL + +A+G Y++ + Sbjct: 43 FPAGHPLHVSAYAVALLGKFMCYALAALALDLVWGYAGILSLGHGLFFALGGYAHGMYLM 102 Query: 87 ---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 W P + M L L Sbjct: 103 RAIGQDGVYQSRLPDFMVFLDWKDYPWYWAFTDHFAYAMLLVVLVPGVLAFVFGYFAFRS 162 Query: 132 IF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 +I + D + R F + +Y++ L Sbjct: 163 RIKGVYFSIITQALTFAAMLLFFRNDTGFGGNNGFTDFKRILGFDITAPGTRAALYWITL 222 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + + ++ + +RD + + + KL + +S+ G+AGA Sbjct: 223 AALAGALVLARAVTQSKLGRVLTAVRDAESRLRFIGYDPLGFKLFVWTLSAVLCGIAGAL 282 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + I+P +I ++ V GG +L + G+ Sbjct: 283 YVPQVGIINPSEMSTENSIEMVIWVATGGRGTLIGPIIGAGAVNGLKTW----------- 331 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F + + LV L ++ L Sbjct: 332 ---FTSVLPEFWLYALGLIFVLVTLFLPTGIVGLARRLA 367 >gi|254698501|ref|ZP_05160329.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus bv. 2 str. 86/8/59] gi|260762963|ref|ZP_05875295.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] gi|260673384|gb|EEX60205.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] Length = 327 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 127/328 (38%), Gaps = 33/328 (10%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 21 LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 76 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 77 GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 136 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 137 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 182 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 183 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 242 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 243 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 293 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 T + + +L+ ++ Sbjct: 294 ------TIVTGLIFMACVLLFRKGIIGE 315 >gi|220921245|ref|YP_002496546.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219945851|gb|ACL56243.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 628 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 118/322 (36%), Gaps = 34/322 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 Y+ + +IL++ + A+ L ++G GL+S + +GAY+ +L + Sbjct: 331 VPLLGDAYLVKVATEILVFALAAFSLQFLIGVGGLVSFGHAAYFGLGAYAAGLLVTGPLR 390 Query: 91 SIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + + A + G ++ G YLA+ TL ++I I +W +T G G Sbjct: 391 LPMEPALLAAPLAGAAGAALFGFFIVRLSGIYLAMLTLAFAQIVYAIGFQWVEVTGGDNG 450 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 I +PS++ +Y++ + + +++ + Sbjct: 451 IVGV------------------WPSAWAADRTVYFYLVAALTLSAIALLRHVIMAPFGYT 492 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R RD+ ++ + + F ++ A G+AG +A + I P + +I Sbjct: 493 LRAARDSATRAEAIGLDVRTHRWLGFTLAGAAAGLAGGLYAFQKGSIDPTLAAIPLSIDF 552 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +V++GG+ ++ + + + Y+ L+ +A+ Sbjct: 553 LVMVLVGGIRTVMGPLVGAGFFHALKDAVMPLTAYW---------------RLLLGLAII 597 Query: 330 LVILMRSHSLLRLRTPSNFLER 351 +L+ L R Sbjct: 598 ATVLIFPRGLAGAAEALRSRRR 619 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 91/309 (29%), Gaps = 32/309 (10%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV------ILGSRYGLSIW 93 S + A GL+IV G +++ Y +GAY V + S + + Sbjct: 11 LSGLASAASLFVIASGLTIVFGVTRIVNFAHGSFYMLGAYLAVSLVPRLLDLSYSPWAFF 70 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + +SA++ G G+ + + L+ + L+ + I+ G + Sbjct: 71 LGVGLSALLVGLIGVAVEMLLLRRLYRVPELFQLLATFGVVLIVEDLVLAIWGPVDLAGP 130 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + ++ + + L +RRT R Sbjct: 131 RAPSLR----------HGVEILGQRFPAYDLVLIGIGPAVLVLLWLLMRRTRFGILIRAA 180 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +++ +L + + G+ GA S + Sbjct: 181 TQDREMVGALGVNQARLFTLTLFLGACLAGLGGALQIPRVPA--NPHMDLSVITDAFVVT 238 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++GGM S+ A ++ + L+ + +V++ Sbjct: 239 VIGGMGSVPGAFLAALLIGELQAFGI--------------LVLPKATLVLVFALMAVVLV 284 Query: 334 MRSHSLLRL 342 ++ LL Sbjct: 285 VKPWGLLGR 293 >gi|332704341|ref|ZP_08424429.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554490|gb|EGJ51534.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 300 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 100/308 (32%), Gaps = 17/308 (5%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 +Y + IY + A G ++V G + L++ Y IGA++ +I+ G+ + Sbjct: 3 FFWEYFFGGLTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTGLIVAGVLGVLGF 62 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + A+ A + G + LI ++ + Sbjct: 63 PGLAILAIALVAAVIWAGAYGYTVEKIAYRPLRNA---PRLSPLISAIGMSIFLQNYVLL 119 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + R + F ++ + ++ + + L+++ T + A R Sbjct: 120 AQTSDFLPFPRLIPNFGFMEPYSMVMGSSDFVIVAVSALVMVGLTLFIKYTRLGKAMRAT 179 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 N+K + + + F + S + G A+ +I+ F I S Sbjct: 180 AQNRKMAQLVGVNVDRVISATFIIGSTLAAIGGVLIASHIGQINFF-IGFIAGIKAFSAA 238 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ S+ IL G + + F L ++++ Sbjct: 239 VLGGIGSIPGAVLGGLILGWTESFATGYISSDYEDVFAF-------------ALLVIILI 285 Query: 334 MRSHSLLR 341 R LL Sbjct: 286 FRPSGLLG 293 >gi|237731474|ref|ZP_04561955.1| inner-membrane translocator [Citrobacter sp. 30_2] gi|226907013|gb|EEH92931.1| inner-membrane translocator [Citrobacter sp. 30_2] Length = 524 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY ++ G + +I+ ++ Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYCTWMVQQLMGQFFPHGLAWYPVIALPVAFLLTAAVGML 310 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + + Sbjct: 311 LER--GVIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPAWLSGGIQVYANL 368 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I VL + L L +T + R + N+ + AF + Sbjct: 369 ILPWNRIVVLGFAMLVLFFTWLLLNKTRLGLRVRAVTQNRNMAACCGVPTGRVDMLAFGL 428 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 429 GSGIAGLGGV--ALSQLGNVGPELGQSYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 486 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++ R L L+ Sbjct: 487 LEPQVGAVLGKIIILVLIILFIQK-------------RPQGLFALKGR 521 >gi|118471578|ref|YP_887299.1| hypothetical protein MSMEG_2980 [Mycobacterium smegmatis str. MC2 155] gi|118172865|gb|ABK73761.1| putative membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 375 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 103/340 (30%), Gaps = 29/340 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +L + + S+ + L + + A G+ + G G+L L + + +G Sbjct: 12 AGFAVAAVLLFGVAPAVLSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLG 71 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y + I M + G + + +A L++ +L Sbjct: 72 GYMMGMHLKIADAEIRHQAVPDFMQIAGVRELPGYWTPFASPVFTLLAILVIPAGIAALL 131 Query: 138 ---------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 I + + A + V + + FF F + + + Sbjct: 132 GLGVFKRRVKGAYFAILSQALAAALAILLVGQTSLGGSNGLNNFRTFFGFTLNDPVNKRM 191 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 +Y++ + +++ L + +RD ++ L K+ A+ +++ F Sbjct: 192 LYFIAAATLLIVVAVVRQLMYSRYGELLVAVRDGEERVRFLGYDPANIKVVAYTLAALFA 251 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 +AGA F I+P +I + V +GG T+L + L Sbjct: 252 SIAGALFTPIVGFIAPSQVGIIPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTLFSERF 311 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + +V+ + L Sbjct: 312 PSEWTYAQ--------------GLLFIVVVGFFPAGIAGL 337 >gi|237737373|ref|ZP_04567854.1| branched-chain amino acid transporter permease livH [Fusobacterium mortiferum ATCC 9817] gi|229421235|gb|EEO36282.1| branched-chain amino acid transporter permease livH [Fusobacterium mortiferum ATCC 9817] Length = 294 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 91/306 (29%), Gaps = 28/306 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLL 95 I + IY + + G ++V G L++ +GAY + + +WL Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYVSLFSIPVFTRIGLPVWLT 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + ++ GM+ + + + I+ LI + L Sbjct: 67 VVPAIVLCVVLGMLTERVAYRPLRNSPRISNLITAIGVSLFLENLFMKIFTPN------- 119 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + ++ LS + ++++T A + Sbjct: 120 ----TRAFPKVFTQEPLRFGDIYLNYGTVVTIVLTLILSVGLQYFMKKTKYGKAMLATSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S +A + ++ ++ P M I +L Sbjct: 176 DYGAAKLVGINVNSTIQLTFAIGSGLAAIASVLYVSAYPQVQPLM-GSMLGIKAFIAAVL 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L + L +V+L++ Sbjct: 235 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADA-------------FVFAILIIVLLVK 281 Query: 336 SHSLLR 341 LL Sbjct: 282 PTGLLG 287 >gi|13474089|ref|NP_105657.1| branched-chain amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14024841|dbj|BAB51443.1| branched-chain amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 320 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 62/323 (19%), Positives = 122/323 (37%), Gaps = 24/323 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ ++ LF+ + +Y + +I++ +FA G +++ G +GLLSL + + G Sbjct: 11 ALHLGVIALLFVLSFVLPEYYHGLLARIMVLAVFAMGYNMLFGYVGLLSLGHAMFFGAGL 70 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y + + G + L +++GL +L+ G I T++ +++F +++ Sbjct: 71 YGAGLAIIQLGWGVPLAFLGGIASGAVLALVIGLLALRATGVAFMIVTMMFAQVFYLLIL 130 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + T G G V L S + Y L + L + Sbjct: 131 YFAAWTGGDQGQVVPQPARALNL---------GATSLDLTNPTVRYMSALVLFSLVLLLT 181 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + R+ IR+N++ L KL A VS +GA +A + Sbjct: 182 LAVVRSRYGRVLVAIRENEERTKMLGYDTFSNKLIAVVVSGTICAASGAAYALLFGYVGS 241 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +I+ + V+LGG + T + V+++ G Sbjct: 242 SFASVQYSILPLLWVLLGGAATTLGPLIGTVFMYYVIDVSSGY---------------TS 286 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + ++ IAL L++L +L Sbjct: 287 AYLLIVGIALILLVLFFPKGILG 309 >gi|311104709|ref|YP_003977562.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310759398|gb|ADP14847.1| inner-membrane translocator 22 [Achromobacter xylosoxidans A8] Length = 327 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 62/336 (18%), Positives = 132/336 (39%), Gaps = 23/336 (6%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +N+ +LAVV +L F+ + ++I+ Y +FA ++++G GLLS Sbjct: 1 MNRQFLGYAVLAVVVAMLPFVGVYPIF--------AMKIMCYALFACAFNLLLGFTGLLS 52 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AY+ +G + + ++ G+ MG +++ G Y A+ TL Sbjct: 53 FGHAAFLGSAAYATGHALKVWGFPTEIGLLFGVAVAALLGLAMGALAIRRSGIYFAMITL 112 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +S++ ++ T G+ G+ R G S + +YYV+ Sbjct: 113 ALSQMVFFFFLQA-KFTGGEDGLQSVPRGTLFGLIDLSKD-------------LNLYYVV 158 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + + II + + +R+N+ SL + KL AF +S+A G+AGA Sbjct: 159 MAIFIIGYFIIWRTVNSPFGQVLQALRENEPRAISLGYDVDRFKLLAFVLSAALAGLAGA 218 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + + +VI + ++GG+ +L+ I++ + N Sbjct: 219 TKTLVFVSATLSDATWQMSGLVILMTLIGGLGTLTGPILGAFIVVLMENKVGDFGQMMAN 278 Query: 308 -SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + T ++ + + +L ++ Sbjct: 279 LTGVDWFLRLGESVTIVIGLIFVICVLAFRRGIVGE 314 >gi|237811955|ref|YP_002896406.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei MSHR346] gi|237504106|gb|ACQ96424.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei MSHR346] Length = 761 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGSALAGWEFGKPMHAYALIAAWCVIAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|319944630|ref|ZP_08018897.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] gi|319742069|gb|EFV94489.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] Length = 317 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 88/287 (30%), Gaps = 1/287 (0%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + IY + A G ++V G +G+++ Y IGAY ++ + G + +P++ Sbjct: 24 NGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTALGTQGSVPLPLAI 83 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + A MI+ + I I Sbjct: 84 GLMLAMAMIVTALYGYSVERIAYRPVRGGPRLVALISAIGMSIFLQNWVALGQGSRDMAV 143 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 ++ S F + V + +++ L + L++R + + A R + + Sbjct: 144 PSLISGGIDIPFGNFDVTFSWSRILIIVVTVVLMVGLSLYIRHSRMGRASRACSQDMQMA 203 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 L F + + + G A + +++ F I + +LGG+ S Sbjct: 204 RLLGIDTNRVISFTFVLGAVLAAVGGVLIAITIGKLN-PFIGFIAGIKAFTAAVLGGIGS 262 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +L + ++ F + + Sbjct: 263 IPGAMLGGVLLGLAETFAAAFISAQYKDIVAFGLLILILLFRPSGLL 309 >gi|217976263|ref|YP_002360410.1| inner-membrane translocator [Methylocella silvestris BL2] gi|217501639|gb|ACK49048.1| inner-membrane translocator [Methylocella silvestris BL2] Length = 282 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 120/305 (39%), Gaps = 42/305 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 S+ + + + A + +V+ G LSL +GAY+ +L GL L++ Sbjct: 12 YQSLIASLGVNGLLALSMYVVLAI-GQLSLGQAAFMGLGAYASALLSLHSGLPFPLVLAA 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I A +++G P+L+ G YLA+AT+ + EI + LI+ +T G G+ Sbjct: 71 ATLIPAAFALVIGAPTLRLSGVYLALATIGLGEILRIFLIQ-SDLTGGALGLSGIPAKAG 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ G ++ + R+ + A IR+++ Sbjct: 130 F-------------------------ALIYGCLAAVTLALMLIARSRVGRAMEAIREDET 164 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + K++A VS+ G+AGA A + I P+ + F + ++S +LGG+ Sbjct: 165 AAAVSGVDLPRYKMAALVVSAMLAGLAGALNAHASSFIGPNDYGFDAAVTILSYALLGGV 224 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S +L + E+ + + + + + +L H Sbjct: 225 GSPFGPLAGALVLTLLPEILRPLQDF---------------RLVVNGAIIVIAVLYMPHG 269 Query: 339 LLRLR 343 L+ R Sbjct: 270 LIPWR 274 >gi|15890848|ref|NP_356520.1| ABC transporter, membrane spanning protein (branched chain amino acid) [Agrobacterium tumefaciens str. C58] gi|15159141|gb|AAK89305.1| ABC transporter, membrane spanning protein (branched chain amino acid) [Agrobacterium tumefaciens str. C58] Length = 335 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 126/334 (37%), Gaps = 33/334 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ L + + ++ + + +FA ++++G GLLS + Sbjct: 28 VLILAGLAVLIAAPMFVYPIFLMKLL----CFALFACAFNLLIGYTGLLSFGHAAFFGGA 83 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY +G++ + + + + G+++G +++ +G Y A+ TL +S++F Sbjct: 84 AYFTAYSVKEWGVTPEIGLIIGMAGAALLGLVIGFFAIRRQGIYFAMITLALSQMFYFFC 143 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 ++ ++ + R F + + +YY +L L+ + Sbjct: 144 LQA--------------PFTHGEDGLQGVPRGHLFGLLDLNAPLNIYYTVLAAFVLALLV 189 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I + ++IR+N++ SL ++ KL AF +S+A G+AG A + Sbjct: 190 IWRFVNSPFGMILKSIRENEQRAISLGYSVQRYKLGAFVMSAALAGLAGGLKALVFQFAT 249 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + + VI + +LGG+ ++ +++ + +F Sbjct: 250 LTDVTWQMSGEVILMTLLGGIGTMIGPIFGAGLVVTLQNYLATSDFPV------------ 297 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ L+ S + Sbjct: 298 ---TIITGLVFMACVLVFRRGLIGEFYASRLGRK 328 >gi|324997165|ref|ZP_08118277.1| ABC transporter permease protein [Pseudonocardia sp. P1] Length = 431 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 97/318 (30%), Gaps = 27/318 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 G + + L+ + A GLS++ G+ GL + IGA + G+ Sbjct: 136 GFATFLRLLVDGIRFGLVIGISAIGLSLIFGTTGLTNFAHGEMVTIGAVVAWYINVVGGV 195 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGD--YLAIATLIMSEIFQNILIKWKPITNGKA 148 + ++ ++ A G L + IA L++S L I G Sbjct: 196 QLIPATIIAVLVGAALGAANELGIWRRLRRRGAGLIAQLVVSIGLSIALRYLILIFFGGR 255 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 + ++ + + L L+RT I Sbjct: 256 SES-----------FTDYTAQQVRNYGPIALTDKDLSAIVIAVVVLLGVALLLQRTRIGK 304 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENI 267 A R + DN+ S + L + + + G FA S F + Sbjct: 305 AMRAVSDNRDLAASSGINVDRVILFVWMLGGGLATLGGVLFALSELSSTVQYEMGFRLLL 364 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ + VILGG+ + I+ +V+L + L Sbjct: 365 LMFAGVILGGLGTAYGALLGCLIVGILVQLSTLVLPLDLKYLGGL-------------AV 411 Query: 328 LFLVILMRSHSLLRLRTP 345 L ++++ R LL + Sbjct: 412 LIVILVFRPQGLLGSKAR 429 >gi|319407280|emb|CBI80921.1| permease protein of ABC transporter [Bartonella sp. 1-1C] Length = 360 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 65/339 (19%), Positives = 116/339 (34%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K I + + FLF Y + I I + A L++ G G+ S Sbjct: 1 MTKSLNIFLSFVSIIIFISFLFYADNYFNDYTLRIINLIAINAILAISLNLTYGFTGMFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY I ++ + I+ + + L+ A + Sbjct: 61 LGHAGFMAIGAYVCAIFLLSPEQK--EMMWILEPIAEPLKNLQLSFFVSVIISGLSAAII 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + F + + + G R+ + T + I + + Sbjct: 119 GLLIAFPILRLGGDYLGIATLGFAEIIRVVIINATPLTN----GSLGIKGIPQYATLWWN 174 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G + I L ++ N R IRD++ A + F + +F V + F G+ GA Sbjct: 175 FGWLAFTIIFITLLLQSNTGNVLRAIRDDEIAAKIMGVNTFFYRCFSFTVGAFFAGIGGA 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I P MF F ++ IV+ GG+ S++ ++ I+ ++E + Sbjct: 235 LTAALISTIDPKMFNFILTFNILMIVVAGGLGSITGSVISSIIITIMLEWLRIIENPLNL 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + + L +IL LL R S Sbjct: 295 GFINIP-GLPGLRMVIFSLILLAIILYWQKGLLGQREFS 332 >gi|289675633|ref|ZP_06496523.1| inner-membrane translocator [Pseudomonas syringae pv. syringae FF5] Length = 313 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 96/320 (30%), Gaps = 27/320 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86 Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 1 SAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAGDGLP 60 Query: 87 -RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 W +P + M L L L + + Sbjct: 61 AFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIMTQAL 120 Query: 146 GKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 AG+ + R + + F S ++ + + S I L Sbjct: 121 TFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFMATVALLVASLYIGWRLA 180 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 181 QSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINPSEMS 240 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + +I V LGG +L ++ G+ F +F Sbjct: 241 PTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPEYWLF 286 Query: 323 LMVIALFLVILMRSHSLLRL 342 + +V L ++ + Sbjct: 287 FLGALFIIVTLYLPKGVIGM 306 >gi|311696547|gb|ADP99420.1| inner-membrane translocator [marine bacterium HP15] Length = 402 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 88/329 (26%), Gaps = 36/329 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84 + +M + L Y A GL + G G+LSL + + +G Y + Sbjct: 34 DPFRLNMVGKYLTYAFVAIGLVMCWGKAGILSLGQGVFFGLGGYCMAMFLKLEASTPEAT 93 Query: 85 -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + S L F + + Sbjct: 94 AIQSTPGIPDFMDWNQLTELPWFWEPFHSFSFTLLAVIGVPVLLAFVIGFAMFTRRVGGV 153 Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193 +A L L + + +Y+V +GM FL Sbjct: 154 YFAIITQAIAAILTILIIGQQGYTGGVNGITDLQTLNGWDIRTDEARTILYFVCVGMLFL 213 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++ + + + + K+ F +++AF G+ GA F Sbjct: 214 CLFVARLVQNRKLGRILVAMNAQENRVRFSGYDVAAFKIFVFCLAAAFAGVGGAMFTLIV 273 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ LGG S+ ++ + F Sbjct: 274 GFMSPSFIGIVASIEMVIFCALGGRLSILGAVYGALLV--------------NAAKSGFS 319 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 SF M V+L + L L Sbjct: 320 ESFPELWPFAMGALFIGVVLAFPNGLAGL 348 >gi|84502431|ref|ZP_01000567.1| putative permease abc transporter protein [Oceanicola batsensis HTCC2597] gi|84389243|gb|EAQ02040.1| putative permease abc transporter protein [Oceanicola batsensis HTCC2597] Length = 285 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 103/309 (33%), Gaps = 28/309 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + I Y M + GL+I+ G + +++ Y +GA+ +L G+ W + + Sbjct: 5 LLIGLINGSFYAMLSMGLAIIFGLMNVVNFAHGAQYMLGAFVTWLLLDALGIPYWGALFI 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ A G+I LK D + +L+ + I+ G G+ + + Sbjct: 65 APVVVAAFGLITERIVLKPLQDMDHLYSLLATYAVALIVEGLVRQQYGSTGLPYSTPIP- 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F+ + +V+L + + + + T + R + Sbjct: 124 -----------GGINLGFMYLPWYRLWVVLFSLMVCVATWVLMEYTKLGAYLRAATEKPD 172 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 S + +A G++G A + I + ++V++GGM Sbjct: 173 IVESFGINVPRMITLTYAFGVGLAGLSGVLAAPVYQV--SPSMGSTLMITIFAVVVIGGM 230 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L V L + ++ + + L ++ R + Sbjct: 231 GSIMGAVLTGYLLGIVEGLTKVF--------------YPEAANMVIFVIMILALIFRPNG 276 Query: 339 LLRLRTPSN 347 L + S Sbjct: 277 LFSGKERSL 285 >gi|317154163|ref|YP_004122211.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] gi|316944414|gb|ADU63465.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] Length = 300 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 91/299 (30%), Gaps = 17/299 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY + A G ++V G + L++ Y IGA++ +I+ + + A+ Sbjct: 12 LTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTGLIVAGVLTALGFPAASILAIA 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + LI ++ + + Sbjct: 72 LVCAVLWAAAYGYTVEKVAYKPLRGAQRLSP---LISAIGMSIFLQNYVMLSQTSDFLPF 128 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 +F I +++ + + L+++ T + A R N+K Sbjct: 129 PALTPQFDFMKPFGSIMNSSELVIVVATVTVCIGLTLFIKFTKLGKAMRATAQNRKMAML 188 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + + F + S+ + G A+ +I+ F I + +LGG+ S+ Sbjct: 189 VGVNVDMVISATFIIGSSLAAVGGVLIASHVGQINYF-IGFIAGIKAFTAAVLGGIGSIP 247 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +L G + + F L L+++ R ++ Sbjct: 248 GAMLGALVLGLTEAFATGYVSSDYEDVFAFC-------------LLVLILIFRPAGIMG 293 >gi|212702448|ref|ZP_03310576.1| hypothetical protein DESPIG_00465 [Desulfovibrio piger ATCC 29098] gi|212674109|gb|EEB34592.1| hypothetical protein DESPIG_00465 [Desulfovibrio piger ATCC 29098] Length = 297 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 94/303 (31%), Gaps = 22/303 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + +Y + A G ++V G L L++ +GAY YG + ++ Sbjct: 12 NALTLGSLYALIAIGYTMVYGILRLINFAHGDILMVGAYFVFFGTFAYGWPWGVAAIIAI 71 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + + G+++ + + D I+ LI + + + Sbjct: 72 LGASVLGVVVERVAYRPLRDAPRISALISAIAVSFFIESLAVVVF----------TGQPR 121 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 ++ + V +V + L A ++ + T A R I + + Sbjct: 122 PVLQPDWLLSVWQFGDVRILKLTAFVPVMTIVLVALLLYIVHHTKPGLAMRAISKDIETT 181 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 L + F + SA +G +A ++ P M + + GG+ S Sbjct: 182 RLLGVRVDNIIAFTFFIGSALAAASGIMWALRYPQVHPYM-GIMPGLKAFIAAVFGGIGS 240 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + L V + + F + I L LV++ + LL Sbjct: 241 IPGAVIGGVALGFVEIMT-----------VAFMPELSGFRDAFAFILLVLVLVFKPTGLL 289 Query: 341 RLR 343 R Sbjct: 290 GER 292 >gi|158426139|ref|YP_001527431.1| putative ABC transporter, permease protein precursor [Azorhizobium caulinodans ORS 571] gi|158333028|dbj|BAF90513.1| putative ABC transporter, permease protein precursor [Azorhizobium caulinodans ORS 571] Length = 331 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 62/322 (19%), Positives = 125/322 (38%), Gaps = 29/322 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + +++L + +FA ++++G +GLLS + + Y Sbjct: 22 VVFALVAIAVLLVAPLVVYPVFLMKVLCFALFACAFNLLLGYVGLLSFGHAMFFGGAGYI 81 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 +GLS L I + + G+I G +++ G Y A+ TL ++++F ++ Sbjct: 82 CAHAVKVWGLSTELGILCGVLFAALLGLITGALAIRRLGIYFAMVTLALAQMFFFFCLQA 141 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 T G+ G+ R F + +I +YYV+L + + II Sbjct: 142 -KFTGGEDGLQGVPRRAV-------------FGLIDITKDINLYYVVLAIFLIGFGIIYR 187 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + IR+N+ SL + KL AF +S+A G+AG+ A S Sbjct: 188 TIHSPFGQVLKAIRENEPRAISLGYRVSQYKLLAFVLSAALAGLAGSTKAIVFQLASLTD 247 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + + V+ + ++GGM ++ I++ + G + Sbjct: 248 VAWQMSGEVVLMTLVGGMGTVLGPVVGAGIIVTMQNYLAGFGEWV--------------- 292 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 + + LV+ + L+ Sbjct: 293 LVIQGLIFVLVVSVFRRGLVGE 314 >gi|317407711|gb|EFV87642.1| ABC transporter [Achromobacter xylosoxidans C54] Length = 309 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 91/305 (29%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +GL++ IGA + + Sbjct: 8 LINGVTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATTIAISLVGGDPSA--S 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + M+ G ++ + +A + + + + Sbjct: 66 AFMVLGLGLLVSVPLCMAVGWTAERVAYRPLRRAPRLAALITAIGVSIILQNVAMMGWGR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ F ++ + ++ + +T + A R N++ Sbjct: 126 NYLNFPQVLTPQVFEIFGARMSTLQIAIVAIAALIMGGLLAVVHKTRLGTAMRATAQNRE 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I +AF + SA +AG A +S F + + +LGG+ Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAVAGMMVATYYG-VSQYTMGFMLGLKAFTAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G L + L LV++ R Sbjct: 245 GNLVGAMAGGLLLGIIESLGAGYIGDLTGGFLG-----SHYQDVFAFFVLVLVLIFRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|307544863|ref|YP_003897342.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216887|emb|CBV42157.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 374 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 91/329 (27%), Gaps = 33/329 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y ++ + L Y + A + +V G LG+LSL +A+G Y+ + R Sbjct: 38 PLHVSTYTVTLLGKYLSYALLAVAVDLVWGYLGILSLGHGAFFALGGYAMGMYLMRQIGD 97 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA--- 148 LP D A L++ + + + + Sbjct: 98 RGTYGDPVLPDFMVFLDWDSLPWYWLGFDMPWFAFLMVFLAPGLLALVFGFLAFRSRVTG 157 Query: 149 ----------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + + + + F + ++ Sbjct: 158 VYLSIITQAMTFALMLAFFRNEMGFGGNNGLTDFRELLGFDLRSDATRLGLFLATGVALA 217 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + + + + RD + L + +L F VS+ G+AGA + Sbjct: 218 LGYVLCRAIVASKLGRVSVACRDAEARARFLGYRVERFQLFVFVVSAMLAGLAGALYVPQ 277 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P F +I V+ V LGG +L ++ + G+ Sbjct: 278 VGIINPSEFSPIFSIEVVLWVALGGRATLYGAVIGALLVNYAKTVFTGV----------- 326 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + LV + + Sbjct: 327 ---MPDAWLFALGGMFVLVTVFLPRGIAG 352 >gi|145224382|ref|YP_001135060.1| inner-membrane translocator [Mycobacterium gilvum PYR-GCK] gi|145216868|gb|ABP46272.1| urea ABC transporter membrane protein [Mycobacterium gilvum PYR-GCK] Length = 370 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 100/336 (29%), Gaps = 29/336 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L+ L + S+ + L + + A G+ + G G+L L + + +G Y Sbjct: 16 VAALVLFVLAPAILSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLGGYMM 75 Query: 82 VILGSRYGLSI---------------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + + L + S A +I + L + Sbjct: 76 AMHLKIADAQLRGDDVPDFMQIQGIRELPSYWTPFASPAVTLIAIVVIPTGIAVVLGLGV 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 I + + A + V + FF F + +Y++ Sbjct: 136 FKRKVKGAYFAILSQALAAALAILLVGQTSLGGSNGLNRFRTFFGFTLNDPANRRMLYFI 195 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + L +++ L ++ +RD ++ L K+ A+AV++ F +AG Sbjct: 196 AAAVLLLVVAVVRQLMQSRYGELLVAVRDGEERVRFLGYDPANIKVVAYAVAALFASIAG 255 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A FA I+P +I + V +GG +L + L + Sbjct: 256 ALFAPIVGFIAPSQVGILPSIAFLIGVAIGGRATLLGPVLGAIGVAWAQTLFSERFPSAW 315 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + LV+ L L Sbjct: 316 TYGQ--------------GLLFILVVGFLPAGLAGL 337 >gi|300024321|ref|YP_003756932.1| urea ABC transporter permease [Hyphomicrobium denitrificans ATCC 51888] gi|299526142|gb|ADJ24611.1| urea ABC transporter, permease protein UrtC [Hyphomicrobium denitrificans ATCC 51888] Length = 363 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 114/354 (32%), Gaps = 44/354 (12%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 LA + +F + + L+Y + A G+S+ G G+LSL + + Sbjct: 6 ITLAAYFLFFAVVFALPFALNSFWTNRIAVYLVYAICAVGISLSWGYAGILSLGQGLFFG 65 Query: 76 IGAYSYVI----------------------------LGSRYGLSIWLLIPVSAMISGACG 107 IGAY + + G +W ++ A Sbjct: 66 IGAYMISMSLTLALPDNNPVPQFMLLNMEPNAPRDLCCATPGSFLWQPFQYLSIGVLAGI 125 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 ++ + + T + + + G+ I L + L Sbjct: 126 LVPCVIAAVLGYVMFKRRTSGVYVSIITLALALI----GQMLIINNQPLTGGFNGLADLA 181 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 F Y +YY++ + + + T + + + +R++ L + Sbjct: 182 PLSVGGIEFDPYGKSVYYLVAAALLVVVLLSRLIVSTRMGHVLKAVREDDARVRYLGYNV 241 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 KL + +S+A G+AG FA + + SP + S +I ++ LGG +SL Sbjct: 242 ENYKLFIYCLSAAIAGIAGLLFAVTSEFASPSLMSTSFSISMVIWAALGGRSSLLGACIG 301 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + S+ + ++ + LV+L+ + Sbjct: 302 ALIVNFI------------GSVASENVMLQPVWPIVLGLMFVLVVLVMPEGIAG 343 >gi|254474835|ref|ZP_05088221.1| urea ABC transporter, permease protein UrtC [Ruegeria sp. R11] gi|214029078|gb|EEB69913.1| urea ABC transporter, permease protein UrtC [Ruegeria sp. R11] Length = 409 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 112/366 (30%), Gaps = 36/366 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + IL L + +L S ++ ++G + L + A + +V G G+LSL Sbjct: 15 FLAILSLFTLGVTILSEGVGIGVISTSFVKTLG-KTLCLCLIAVAMDLVWGFTGILSLGH 73 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISGACGMIMGLP 113 + +G Y + + ++ ++ + L Sbjct: 74 FAFFGLGGYMIGMWLMYERTRLIVVDSLAQAEIPPTSTEVVDAIATQVFGVVGSSEFPLI 133 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY-----------------VADRL 156 L + +++ ++ W + G+Y D Sbjct: 134 WAFSHSLTLQLILVVLVPGLLALIFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSG 193 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + L +S + I+ + L + W+ + R IRDN Sbjct: 194 LRGNNGLSGLQNLPGVTASQDVVSIWFLWASALALGLGYMLAAWVVSGKFGSVIRGIRDN 253 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++ KL+ F +++ +AGA + I+P+ +I + V +G Sbjct: 254 EARVRFLGYSVEVYKLAVFTLTACIAAVAGALYYPQAGIINPEEMAPIASIYLAVWVAIG 313 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G L A + + G + + L+ ++ LV L Sbjct: 314 GRGRLYGAVIGAAFVSLLSTWFTGGQAPDIPLGF-YTIKWVDWWQVLLGVSFVLVTLFAP 372 Query: 337 HSLLRL 342 + L Sbjct: 373 QGIGGL 378 >gi|229490180|ref|ZP_04384027.1| urea ABC transporter, permease protein UrtC [Rhodococcus erythropolis SK121] gi|229322928|gb|EEN88702.1| urea ABC transporter, permease protein UrtC [Rhodococcus erythropolis SK121] Length = 368 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 106/350 (30%), Gaps = 20/350 (5%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MSI + + L A+V + L + S+ + L + + A G+ + Sbjct: 1 MSILNNSRIRVWGGFALAAIVLFAIAPAVL-----SDFRLSLLAKFLCFAIVAVGIGLAW 55 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---------------WLLIPVSAMISGA 105 G G+L+L + + IGAY + + L S Sbjct: 56 GRGGMLTLGQGVFFGIGAYVMAMHLKIADAELKGDAVPDFMSIAGKTELPGYWQPFASPF 115 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 + L L + I + + A + + + + Sbjct: 116 VAIFAILFLPAAVAFLLGLGVFKRRVKGAYFAILSQALAAAFAILLIGQQSIGGSNGLNR 175 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 FF F + + ++++ G+ S ++I L + +RD ++ L Sbjct: 176 FRTFFGFNLNDPANKQMLFFIAAGVLLASVALIRQLMNSRYGELLVAVRDQEERVRFLGY 235 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 KL A+ ++ G+AGA F ISP +I + V +GG +L Sbjct: 236 DPANIKLVAYVTAAFLAGIAGALFVPIVGIISPADVGIVPSIAFLIGVAIGGRATLLGPV 295 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 + + + V LF ++ R Sbjct: 296 LGAIGVAWAQSTFSEKLPSGWIYAQGLMFIVVVGFFPAGVAGLFALMRHR 345 >gi|116669718|ref|YP_830651.1| inner-membrane translocator [Arthrobacter sp. FB24] gi|116609827|gb|ABK02551.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Arthrobacter sp. FB24] Length = 322 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 117/294 (39%), Gaps = 6/294 (2%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + G GLL+ A+GAY + I +G+ ++ + ++ S +++G+P+L+ Sbjct: 31 VHFGYSGLLNFGQAGFMAVGAYGFAISTLSFGVPFFVGLLIAVACSAIFALLLGIPTLRL 90 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 R DYLAI T+ +EI + I+ + + + +A + Sbjct: 91 RADYLAIVTIAAAEIVRYIVTTNQLTSVTGSANGLAAFEGGFYSM---NPFPEGSYFGMN 147 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + F+ V G+ + +++ L R+ + IR+++ A SL + K+ A + Sbjct: 148 NRDFFIRVVGWGLVIVCCTLVWLLMRSPWGRVLKGIREDENAVRSLGKNVYAYKMQALVI 207 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 +AG F R + P + + + ++LGG+ ++ I V+ L Sbjct: 208 GGVLGALAGMIFTLPRGAVQPANYGTELTFFLYTCLLLGGLGTVLGPVVGAMIFWVVLSL 267 Query: 298 CCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 G+ + S L+ +AL L+++ R + + F Sbjct: 268 TQGILYGLIESGAVTWLNTVQAGQLRYILVGVALMLLMIFRPQGVFGNKKELAF 321 >gi|260655478|ref|ZP_05860966.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Jonquetella anthropi E3_33 E1] gi|260629926|gb|EEX48120.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Jonquetella anthropi E3_33 E1] Length = 297 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 94/303 (31%), Gaps = 22/303 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + +Y + A G ++V G L L++ + +GAY L + +P++ Sbjct: 12 NALTLGSLYALIAIGYTMVYGILRLINFAHGDIFMVGAYLVFWAVGTASLPWAVAVPLAI 71 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + + G+++ + K + I+ LI + ++ + Sbjct: 72 IGTAVAGILVDRVAYKPLREAPRISALISAIGVSFLIENLALVVF----------TGVPK 121 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 R + V + L ++ L +T A R I + + Sbjct: 122 PMPRFAPLVKVMKFGNIRILPLAIVVPVITFLLVVGLLWILYKTPQGLAMRAISKDIETT 181 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + F + SA AG +A +I+P M + GG+ S Sbjct: 182 RLMGVRVDRIIALTFGIGSALAAAAGIMWALRYPQINPFM-GVMPGFKAFIAAVTGGIGS 240 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + L + L + F + I L L++ ++ LL Sbjct: 241 VQGAVIGGLTLGFLEILL-----------VAFFPALTGYRDAFAFILLILILFVKPTGLL 289 Query: 341 RLR 343 + Sbjct: 290 GEK 292 >gi|152970837|ref|YP_001335946.1| high-affinity branched-chain amino acid ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262041878|ref|ZP_06015062.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330000402|ref|ZP_08303716.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Klebsiella sp. MS 92-3] gi|150955686|gb|ABR77716.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259040783|gb|EEW41870.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328538014|gb|EGF64187.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Klebsiella sp. MS 92-3] Length = 324 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 86/322 (26%), Gaps = 14/322 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 L + + + +Y + A G ++V G +G+++ Y + AY Sbjct: 11 AAVCLAAGGAMTAFFLQQLINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMVSAYL 70 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 I + P+ + +++ + + I Sbjct: 71 CAIGLALLSFFGIHSFPLLIFATLVFTIVVTGVYGWAIERIAYRPLRNSTRLAPLISAIG 130 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + T+ S V ++L+ + Sbjct: 131 MSLILQNYVQLSQGPNQQGIPTLLSGALRMTVGDGVVQITWTKVFILVAALVGMLILTWI 190 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 ++ T + R + +++ L F + +A G+AG + Sbjct: 191 IQYTRLGRICRATQQDRRMAAILGINTDRVISLVFVIGAAMAGLAGVLVTMNYGTFDFY- 249 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F I + +LGG+ SL +L G+ + + F Sbjct: 250 IGFIIGIKAFTAAVLGGIGSLPGAMLGGLLLGVAEAQFAGLVNSDYKDVFSF-------- 301 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 L +++ R LL Sbjct: 302 -----ALLVAILIFRPQGLLGR 318 >gi|28871219|ref|NP_793838.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28854469|gb|AAO57533.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 391 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 103/353 (29%), Gaps = 36/353 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ ++ L L + + +M + L Y A GL + G G+LSL + + Sbjct: 13 GVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFG 72 Query: 76 IGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 +G Y + + ++ + + S+ Sbjct: 73 LGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQITELPALWVPFHSFTFSVFAVIAV 132 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA--------DRLYFLGTTVRSLIRFFRFP 173 + I+ + + I + L + L + Sbjct: 133 PVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGINGITDLKTLLGWD 192 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 ++ +Y+V G+ I ++ + + +RD ++ + K+ Sbjct: 193 IRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERVRFSGYDVAGFKIF 252 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + V++ F + GA FA +SP +I ++ +GG SL + ++ Sbjct: 253 VYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGSLLVNY 312 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 F SF LM V++ L L Sbjct: 313 GKTY--------------FSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESH 351 >gi|86135882|ref|ZP_01054461.1| ABC transporter permease protein [Roseobacter sp. MED193] gi|85826756|gb|EAQ46952.1| ABC transporter permease protein [Roseobacter sp. MED193] Length = 327 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 112/312 (35%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 ++ LLL + + ++ ++ ++ I + GL+I +G GL+SL + IG Sbjct: 9 AGILLALLLVPLMAWKMDEPFLITLATKVTILALAGVGLNIALGLGGLVSLGHAAFFGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ IL S L ++ L ++ + + Sbjct: 69 GYAMGILASHAQNYEPLFSWPFLFEGSNQMPLIWLVAVLASAAAALVIGALSLRTSGVYF 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + G S+ P + I + V + L+ Sbjct: 129 IMITLAFGQMLYYFTISWSAYGGEDGLSIWVRNEMPGVNTLDPIQFFAVTFVILCLTLWF 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + ++A A R +++ ++ +L AF +S A G+AGA FA +S Sbjct: 189 AARVAQSAFGLALSAARQSEERVETVGLAPFKLRLIAFVISGAITGLAGALFADLNRFVS 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P M + + ++ VILGG+ L A+ I + L G++ Y+ L Sbjct: 249 PTMLSWHTSGEIMIFVILGGVGRLYGPVVGAAVYILLEHLLGGISEYWQIFLGLLLLGMV 308 Query: 318 MRHTTLMVIALF 329 + ++ AL Sbjct: 309 LFARGGLIGALL 320 >gi|121604807|ref|YP_982136.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120593776|gb|ABM37215.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 338 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 115/306 (37%), Gaps = 18/306 (5%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 ++ M +++I +FA L ++ G GL+SL + + Y+ L + Sbjct: 28 PFAGTEFYTEMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAYFGLAGYALAFLTPQGEPV 87 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 +W +PV+ + SG +I+G ++ RG Y + T+ +++ + K + Sbjct: 88 SLWWTLPVAVLGSGLAALIIGFFVVRTRGIYFIMVTMAFAQMVFFLFFDNKALGGSDG-- 145 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L R F + + + +YY L L + + L + A Sbjct: 146 --------LYINFRPSAALFGWVPFELDGKRTLYYFTLAAMLLVYAFLRRLLWSPFGRAL 197 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 IR N+ ++ KL+AF ++ G+AG + I+P++ F + I Sbjct: 198 AGIRVNEHRMRAMGFYTFGYKLTAFTLAGGLAGLAGYLWGTQTGYINPELMGFQMSAHTI 257 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +V+LGGM +++ ++ + + + M + + L Sbjct: 258 MMVVLGGMGNIAGAMVGAFTFEYLLHVFKDLPQVG-------SVNLGKHWQLWMGLFIVL 310 Query: 331 VILMRS 336 ++ Sbjct: 311 LVTFAP 316 >gi|53721021|ref|YP_110007.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia pseudomallei K96243] gi|52211435|emb|CAH37426.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia pseudomallei K96243] Length = 325 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 122/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + Sbjct: 27 FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGVLAGTA 86 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 87 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 132 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+L + + I+ + + I++N+ Sbjct: 133 GLQGVPRGRLFGLVDLSSDLALYYVVLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAI 192 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AGA + ++ + +V+ + ++GGM +L Sbjct: 193 SLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 252 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + S T + + + +L ++ Sbjct: 253 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIV 312 Query: 341 RL 342 Sbjct: 313 GE 314 >gi|300704063|ref|YP_003745665.1| ABC branched-chain amino acid transporter membrane component [Ralstonia solanacearum CFBP2957] gi|299071726|emb|CBJ43050.1| putative ABC-type branched-chain amino acid transporter, membrane component [Ralstonia solanacearum CFBP2957] Length = 440 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 114/333 (34%), Gaps = 17/333 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + L L+ + L Q + ++ Q+ I ++FA ++++G G+LS Sbjct: 23 RPFNLARWLIWGTTALVMIVLPLIWPQGFAITLLSQMGIMIIFALSYNMLLGQSGMLSFG 82 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + +GA+ V L +R G S + + ++ A + G G T Sbjct: 83 HAVYAGLGAFMAVHLLNRIGAS--QALGIGGPLAVALLPLAGGLGGALFGVLFGYVTTRK 140 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + +++ + + D G + +YY++ Sbjct: 141 AGTTFSMITLGIGEMVFASALMFPDFFGGEGGVSTNRSIGEPLLGISFGPARQVYYLIAA 200 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 C +S +++ +T + +RDN + + + + +S+ F G+AGA Sbjct: 201 WCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYSTQRVRCLVVILSAFFAGIAGALS 260 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + + ++ + + + V+ +GGM + + + G+ + Sbjct: 261 CINFEIVTAENVSAARSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSGITKAW---- 316 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L+++ + L Sbjct: 317 -----------LLYLGLFFVLMVMYAPGGIASL 338 >gi|121595422|ref|YP_987318.1| inner-membrane translocator [Acidovorax sp. JS42] gi|120607502|gb|ABM43242.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax sp. JS42] Length = 333 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 123/311 (39%), Gaps = 15/311 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS AY +G + L + + Sbjct: 30 FVMKLLCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGHAVKVWGATPELGLLAGLL 89 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 G++MG +++ +G Y + T+ ++++ ++ T G+ G+ R Sbjct: 90 AGALLGLVMGFFAIRRQGIYATMITMALAQMLFFAALQAP-FTGGEDGLQGVPR------ 142 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYYV L + ++ +I+ + + I++N+ Sbjct: 143 -------GKLFGVLDLSSDLTMYYVCLIVVVVAFLLIVRTIHSPFGQVLKGIKENEPRAI 195 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AGA + +S + V+ + ++GG+ +L Sbjct: 196 SLGYDTNRFKLLAFVISAAIAGLAGALKTLVLGFATLTDVHWSASGHVVLMTLVGGLGTL 255 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S +A+++ + + + + + + T + + + +L ++ Sbjct: 256 SGPLVGSAVVVLLENKIGELGTLLAQLTTIDWFNTLGESVTIVTGLIFVVCVLAFRRGIM 315 Query: 341 RLRTPSNFLER 351 R Sbjct: 316 GEIIAWLERRR 326 >gi|260461187|ref|ZP_05809436.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259033221|gb|EEW34483.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 324 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 117/301 (38%), Gaps = 29/301 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +G I + Sbjct: 41 FLMKMLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAHAVKVWGWPPEAGILLGMA 100 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G++MG +++ +G Y A+ TL +S++F ++ Sbjct: 101 GAALLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCVQA--------------PFTEGED 146 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R + + MYY +L + + + + + R+IR+N+ Sbjct: 147 GIQGVPRGVLLGVLDLNVSLNMYYFVLAVFLVGVFSVWRIVNSPFGMILRSIRENEGRAI 206 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL+AF +S+A G+AG+ A + + + VI + +LGG+ ++ Sbjct: 207 SLGYSVAKYKLAAFVMSAALAGLAGSLKAIVFQFATLTDVTWQMSGEVILMTLLGGIGTM 266 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++++G+ F T + + +L+ ++ Sbjct: 267 VGPVIGASLVVGLENTLATSGFPV---------------TIATGLIFMVCVLIFRRGIVG 311 Query: 342 L 342 Sbjct: 312 E 312 >gi|257454525|ref|ZP_05619783.1| inner-membrane translocator [Enhydrobacter aerosaccus SK60] gi|257448087|gb|EEV23072.1| inner-membrane translocator [Enhydrobacter aerosaccus SK60] Length = 577 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 88/291 (30%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ IGAY+ ++ S + + + + + ++ Sbjct: 304 ITYGLLGVINMAHGELIMIGAYTTYVVQSFFKSHLAGYVDWYMLAAIPLAFLVSAVIGMI 363 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + + S + + + Sbjct: 364 IER--VVIRPLYGRQLETLLATFGVSLILMQLVRMIFGAQNVEVSNISWLSGAVALTPSL 421 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + ++ L+ T R + N++ ++ + AF + Sbjct: 422 MLPYNRIAIIGFTIIVLLLLVFLLKYTRFGLFVRAVTQNRQMARAVGIRSARVDMMAFGL 481 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A + + I +V++GG+ + A L + Sbjct: 482 GSGLAGLAGCALAQVGNV--GPDLGQNYIIDAFLVVVVGGVGQIWGAVLAALGLGVSGTV 539 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 ++++ + L I R L L+ Sbjct: 540 LEIGMGAVIAK-------------IILLVLVVLFIQKRPQGLFALKGRFVE 577 >gi|254180058|ref|ZP_04886657.1| ABC-transporter [Burkholderia pseudomallei 1655] gi|184210598|gb|EDU07641.1| ABC-transporter [Burkholderia pseudomallei 1655] Length = 797 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGSALAGWEFGKPMHAYALIAAWCVIAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|297623211|ref|YP_003704645.1| inner-membrane translocator [Truepera radiovictrix DSM 17093] gi|297164391|gb|ADI14102.1| inner-membrane translocator [Truepera radiovictrix DSM 17093] Length = 491 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 98/277 (35%), Gaps = 20/277 (7%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-------------YGLS 91 I+ + A L+++ G+ G+LSL +G Y+ +L Sbjct: 59 LFAIWGVAAISLNLINGTTGILSLGHHGFMLVGGYTTALLTLPEIRRQQIAESARSQMND 118 Query: 92 IWLLIPVSAMISGAC-------GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 L + ++ + + + L A + ++ ++ + Sbjct: 119 FTLGLSLNNGLRALGLEALTTPETLWIRFLIALFIGGLVAALFGLLVGIPSLRLRGDYLA 178 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G RL + + + + G L+ ++ + + Sbjct: 179 IVTFGFGEIIRLLASTSLLGPFTNGSLGYTGVPAQIGRSLWWTFGFLALTVFVMTKFKTS 238 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + A + IR+++ A ++ + + K+ AFA+S+ F G+AG + + D F F+ Sbjct: 239 SYGRALQGIREDEIAAEAMGVNLAYHKVLAFALSAFFAGVAGGLYTSWLSGARLDYFLFT 298 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 + + +GG S + + TA+++ V + + Sbjct: 299 LTFFFLVAISVGGTGSYTGVLLGTALVVFVRQYGDPL 335 >gi|296534308|ref|ZP_06896785.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] gi|296265374|gb|EFH11522.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] Length = 318 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 69/331 (20%), Positives = 123/331 (37%), Gaps = 29/331 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + LL L L + + + + LI + A G +++ G G LS + G Sbjct: 6 LIPLVLLLGALALTPLFASNLLLNFLVSALIIALGAQGWNLLGGYGGQLSFGHAALFGTG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQN 135 AY+ IL + GL+ W ++ G ++G S + RG Y A+ TL +E+ + Sbjct: 66 AYATAILQMKLGLNAWAGFAAGVALAALAGWVIGFLSFRARLRGSYFALVTLAFAEVLR- 124 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 IL T G AG+ + + + +V+L A Sbjct: 125 ILANAADFTGGAAGLLIKLQPGLANLQFATRAE--------------ALWVVLACILAVA 170 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + LW+ R +R+N+ A +L ++ KL A +S A G AG +A + Sbjct: 171 LLTLWIDRGRFGAHLVAVRENEDAARALGVDVLATKLRAITLSGAITGAAGCLYAQNFLY 230 Query: 256 ISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + ++ ++ I+GG+ ++ L GV E+ GM + Sbjct: 231 LDANIAYGTWISVELLIAAIVGGLGTVLGPVIGALALHGVGEITKGMLGWL--------- 281 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L I L + L+ Sbjct: 282 --TGIDLVLFGIILIAAVAFVPAGLVGALRR 310 >gi|237653748|ref|YP_002890062.1| inner-membrane translocator [Thauera sp. MZ1T] gi|237624995|gb|ACR01685.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 321 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 69/321 (21%), Positives = 128/321 (39%), Gaps = 26/321 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L + + + M ++L+ +FA L ++VG GL+S + I AY+ Sbjct: 11 LVALAIVACVPLSGESFYIEMVGKVLVMAIFAMSLDLLVGFTGLVSFGHAAYFGIAAYAV 70 Query: 82 VILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 IL Y S+W ++P S +S ++GL L+ +G Y + TL +++ I Sbjct: 71 AILSPEYEAASLWYVLPASVGLSALAAFVIGLFVLRTKGIYFIMVTLAFAQMAYFIFHD- 129 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 P+ G G Y+ ++ F + + E+ M+Y +L + L + Sbjct: 130 TPLGGGSDGKYLNNKPS---------ASIFGWEPFDLTNEVHMFYFVLAVLVLVYLFLAR 180 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + ++ I+ N+ SL KL AF ++ A G+AG +A ++P++ Sbjct: 181 VLQSPFGRVLVGIKSNEHRMQSLGYYTFRYKLGAFTLAGALGGLAGFLYAVLSGFVTPEL 240 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + E+ V+ +VILGGM +L + F ++ + Sbjct: 241 LSWHESGNVLLMVILGGMGNL---------------AGAIAGAFAFEAMREIFADITKYW 285 Query: 321 TTLMVIALFLVILMRSHSLLR 341 LM + V+L L Sbjct: 286 QLLMGGVIVAVVLFLPGGLAG 306 >gi|134282672|ref|ZP_01769375.1| ABC-transporter [Burkholderia pseudomallei 305] gi|134245758|gb|EBA45849.1| ABC-transporter [Burkholderia pseudomallei 305] Length = 794 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 107/322 (33%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 13 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 72 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ V A G + G + + G A+ TL + E+ Sbjct: 73 GAFVAAHGFNRYGLPLPLVPLVGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 132 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 133 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVIAAV 180 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 181 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 240 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 241 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 289 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 290 ----LLYLGLLFVAVVLAAPGG 307 >gi|115526589|ref|YP_783500.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115520536|gb|ABJ08520.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 384 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 43/328 (13%), Positives = 90/328 (27%), Gaps = 36/328 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84 + ++ + L Y A GL + G G+LSL + + +G Y + Sbjct: 32 DIFRLNLVAKYLSYAFVAIGLVLCWGFGGILSLGQGVFFGMGGYCMAMYLKLEASSVANT 91 Query: 85 -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + +L A + + Sbjct: 92 KIQSTPGIPDFMDWNQLTQIPWFWQPYHSLTLTILSILTLPALFAFVIGAAMFKRRVGGV 151 Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193 VA L L + + + +Y+V + + F Sbjct: 152 YFAIITQAVAAILTILIIGQQGYTGGINGITDLRTLQGWDIRPDHAKFVLYFVEVVLLFG 211 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + L++R + +R+ + ++ K+ AF +++ F + GA F + Sbjct: 212 CILLALFVRHSKFGRVLVAMREKEDRVRFSGYSVANFKIFAFCLAAMFAAVGGAMFTLNV 271 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG S+ T ++ Sbjct: 272 GFMSPSFVGIVPSIEMVIYTAVGGRMSIFGAVYGTLLVSFAKTGLSE------------- 318 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 SF + V+L + L Sbjct: 319 -SFPQLWLFGLGALFIAVVLAFPNGLAG 345 >gi|120612149|ref|YP_971827.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120590613|gb|ABM34053.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax citrulli AAC00-1] Length = 385 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 94/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I L A Y ++ +I+ Y + A + ++ G G+LSL + Sbjct: 29 IAVCAVAPVLNLWVPAGSAFHLSDYAVALVGKIMCYAICALAMDLIWGYTGILSLGHGLF 88 Query: 74 YAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 +A+G Y + W +P +S + + L Sbjct: 89 FALGGYVMGMYLMRQIGRDGNYKSDLPDFMVFLDWKELPWHWALSDSFIATLVLIVAVPG 148 Query: 119 GDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 +I + + + R F + Sbjct: 149 LVAFVFGYFAFRSRIKGVYFSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFALA 208 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + ++ + + WL + + IRD + + + KL+ + Sbjct: 209 TQHMRMLLFVLTGLALLGFFLLGRWLVGSRFGRVLQAIRDAETRVMFSGYSPLPYKLAIW 268 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+ G+AGA + I+P + +I + +GG +L+ ++ G Sbjct: 269 TISAMMCGVAGALYVPQVCIINPGEMSAANSIEIAVWAAVGGRATLAGPIAGAFLVNGAK 328 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + V L + L Sbjct: 329 SWLT--------------VTAPEFWLYFLGALFIAVTLFLPQGVAGL 361 >gi|170078692|ref|YP_001735330.1| high-affinity branched-chain amino acid transport protein [Synechococcus sp. PCC 7002] gi|169886361|gb|ACB00075.1| high-affinity branched-chain amino acid transport protein [Synechococcus sp. PCC 7002] Length = 366 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 118/366 (32%), Gaps = 56/366 (15%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y+ + I Y +F GL++ G GL++ V +GAY+ V+L S+ + L Sbjct: 4 YLVYLTISAATYGIFCLGLNLQWGFTGLINFGHVAFMTVGAYATVLLSSQGVPLLLSLAI 63 Query: 98 VSAMIS------------------------------------------GACGMIMGLPSL 115 + + + LP Sbjct: 64 GAGVAALLGLLIGLSTLRLREDYLAIVTIGVSELVRLVALNEEWLTRGAFGVQGYPLPLG 123 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNG-----------KAGIYVADRLYFLGTTVR 164 FR + + +LI I W+ K+G+ V G + Sbjct: 124 SFRPNQVGKISLIFWLTIIAIFAAWQLWRGLRWRWKKLKKQEKSGLGVIVWGILGGGIIT 183 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 SL Y+ + + + L + + +L ++ + IR++++ +L Sbjct: 184 SLFINGCIALQNYNYKAGLMLLSVVALTLVYAGLEYLVQSPWGRVLKAIREDEEIPRALG 243 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + + KL AF + A G AG+F+A + P F +IV+LGG + Sbjct: 244 KNVFWYKLQAFMLGGAIAGGAGSFYAWQLTNVYPANFDPLVTFNAWTIVVLGGAGTNPGT 303 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 I L + L D ++ + L ++++ R +L + Sbjct: 304 LIGALIFFAYDSLTRFVLPQLN---LVDDARLGALRIMVIGLILMVLMVWRPQGILGNKD 360 Query: 345 PSNFLE 350 + Sbjct: 361 ELTLGK 366 >gi|91791096|ref|YP_552046.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91700977|gb|ABE47148.1| inner-membrane translocator [Polaromonas sp. JS666] Length = 357 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 143/341 (41%), Gaps = 25/341 (7%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 S+F + +++ + L L T S + + + L++ GL++++G Sbjct: 18 SLFPIPADRWM-------IGLLLAFALTAPFTMSSLVLSTQLLPWLVWTSAVLGLNLILG 70 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G IGAY+ + G+R G+ + + + +++ G++ +L+ +G Y Sbjct: 71 WAGQFHFGYAAIMGIGAYT-AVHGARNGIPWEIAVVLGGVMASVIGIVFAFAALRVKGLY 129 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LA++TL + + ++ I+ G A R V E Sbjct: 130 LALSTLALQFVMDWVISHVPAISGGSQATLQAPA--------------MRLLGQTVTSES 175 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +YY+ LG C L +L LRRT + A +R+ A + ++ KL AFA SS Sbjct: 176 GLYYMALGWCLLVTVFMLNLRRTGLGRALVAVREKDFAAAVIGVHSLYYKLVAFATSSFI 235 Query: 242 IGMAGAFFAASRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G++GA + R+ +P+ F + +I ++++VI+GG+ S+ A ++ + L Sbjct: 236 GGVSGAILIFTFYRVATPEQFAVNVSIELLAMVIVGGLGSIIGSYFGAAFILLMPGLMNS 295 Query: 301 MNFYYFNSLLKFDCSFNMRHT--TLMVIALFLVILMRSHSL 339 + + + + H + + + +L+ L Sbjct: 296 LIAWLAQLMGISLGVETLAHIPHAVYGALIIIFLLVEPMGL 336 >gi|242279019|ref|YP_002991148.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638] gi|242121913|gb|ACS79609.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638] Length = 300 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 96/299 (32%), Gaps = 17/299 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY + A G ++V G + L++ Y IGA+ +++ + + + Sbjct: 12 LTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFVGLVVAGILTSFGFPAASIIVLA 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 S A + + LI ++ + + + Sbjct: 72 SIAAIIYAAAYGYTLEKIAYRPLRDA---PRLSPLISAIGMSIFLQNYVMLSQTSDFLSF 128 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + F + + +++ + ++ L+++ T + A R N+K Sbjct: 129 PNLIPEFHFLGKFESMIGSSDFVIIVVAAVVMVALNLFIKFTRMGKAMRATAQNRKMAML 188 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + + F + SA + G A+ +I+ F I + +LGG+ S+ Sbjct: 189 VGINVDQVISATFVIGSALAAVGGVLIASHIGQINFF-IGFIAGIKAFTAAVLGGIGSVP 247 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 IL C G + + F L L+++ R LL Sbjct: 248 GAMLGGLILGWTESFCTGYVSSDYEDVFAF-------------ALLVLILIFRPSGLLG 293 >gi|332653976|ref|ZP_08419720.1| branched-chain amino acid ABC transporter, permease protein [Ruminococcaceae bacterium D16] gi|332517062|gb|EGJ46667.1| branched-chain amino acid ABC transporter, permease protein [Ruminococcaceae bacterium D16] Length = 306 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 96/311 (30%), Gaps = 15/311 (4%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y+ IY + A G ++V G +L+ +GAY+ + Sbjct: 3 FLTLLDYLIRGLSLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYACFFTVTGMSPM 62 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + ++ G+++ + G + ++ + I Sbjct: 63 FEEGSVAAMVVPALAGVVLSMVVCTALGVVIEGLAYKPLRQAPSLAVLITAIGVSYFLQN 122 Query: 152 VADRLYFLGTTVRSLIRFFR-FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 A L+ + S I + ++ + + L+ +T + A Sbjct: 123 AALLLWSSSPKIFSPIVGSGQLQVGPLNISYVTLVTIVACIVIMVCLTLFTGKTKMGKAM 182 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + +++ A + + FA+ SA +AG ++ ++P I Sbjct: 183 RAVSEDKGAAQLMGINVNRTISMTFAIGSALAAIAGVLLCSAYPTLTPTT-GSMPGIKAF 241 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + + GG+ S+ +L + ++ + F L + Sbjct: 242 TAAVFGGIGSIPGALLGGLLLGIIEIFASAYISTQLSTAVVFG-------------VLIV 288 Query: 331 VILMRSHSLLR 341 V+L++ LL Sbjct: 289 VLLVKPAGLLG 299 >gi|196041926|ref|ZP_03109214.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|196027298|gb|EDX65917.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] Length = 333 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 129/325 (39%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T ++ + +V+L+ L+ Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311 >gi|207744835|ref|YP_002261227.1| abc transporter (partial sequence c terminus) transmembrane protein [Ralstonia solanacearum IPO1609] gi|206596245|emb|CAQ63172.1| abc transporter (partial sequence c terminus) transmembrane protein [Ralstonia solanacearum IPO1609] Length = 292 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 110/290 (37%), Gaps = 15/290 (5%) Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113 GL VG GLLS + Y L L+ L + G+++GL Sbjct: 7 LGLQPAVGYTGLLSFGHAAFFGGAGYMAGYLMRDLHLTPELGLVAGTAAGALIGLVVGLL 66 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 +++ +G Y A+ TL ++++F ++ T G+ G+ R F Sbjct: 67 AIRRQGIYFAMITLALAQMFYFFCLQAP-FTGGEDGLQGVPR-------------GKLFG 112 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + ++ +YY +L + + +I+ + + I++N+ SL KL Sbjct: 113 VLDLSSDLTLYYFVLVVVVAAFLVIVRTIHSPFGQILKAIKENEPRAISLGYDTDRFKLL 172 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF +S+A G+AGA + ++ + VI + ++GG+ LS A++I Sbjct: 173 AFVLSAALSGLAGALKTLVLGFETLTDVHWAMSGSVILMTLVGGLGILSGPILGAALVIA 232 Query: 294 VVELCCGMNFYYFNSLLKFDCS-FNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + TT+ + +L ++ Sbjct: 233 LENKLGDIGTFLAGVTGVDGFNVLGESVTTVTGAIFVICVLTFRRGIMGE 282 >gi|300117539|ref|ZP_07055326.1| branched chain amino acid ABC transporter permease [Bacillus cereus SJ1] gi|298725074|gb|EFI65729.1| branched chain amino acid ABC transporter permease [Bacillus cereus SJ1] Length = 333 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 128/325 (39%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + + I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFLIGIIAAIIISAMVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T ++ + +V+L+ L+ Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311 >gi|114766862|ref|ZP_01445784.1| branched-chain amino acid ABC transporter, permease protein [Pelagibaca bermudensis HTCC2601] gi|114540908|gb|EAU43968.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. HTCC2601] Length = 412 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 101/367 (27%), Gaps = 36/367 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + + + +L G + L ++ A + +V G G+LSL Sbjct: 14 WFLLALGIFALIVTVLSEAAGNGMISTSFVKTLGKTLCLMLVAVAMDVVWGYTGILSLGH 73 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLL-------------------------------IPVS 99 + + +G Y + I + P Sbjct: 74 MAFFGLGGYMIGMWLMYARTEIIVTESLLAAALPPTPQEIHDSIGTQIFGVVGSSQFPAI 133 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + + + + + + L L L + + A + Sbjct: 134 WIFAHSFWLQIAMVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNESG 193 Query: 160 GTTVRSLIRFFRFPSSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L P + I ++ L + W+ + R IRD Sbjct: 194 LRGNNGLSGLQNLPGLDDVPQSTLSIAFFWASAAALGLGYVLFAWVTSGKFGSVIRGIRD 253 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ L + KL F ++ G+AGA + I+P+ +I + V + Sbjct: 254 NESRVRFLGYHVEGYKLFVFTLTGIVAGIAGALYYPQAGIINPNEIAPIASIYLAVWVAI 313 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L A A++ + + + L+ ++ V L+ Sbjct: 314 GGRGRLYGAALGAALVSLLSSWFTSGAVPSVPLGF-YTIQWTDWWLVLLGVSFVAVTLLA 372 Query: 336 SHSLLRL 342 + L Sbjct: 373 PKGIGGL 379 >gi|222111635|ref|YP_002553899.1| inner-membrane translocator [Acidovorax ebreus TPSY] gi|221731079|gb|ACM33899.1| inner-membrane translocator [Acidovorax ebreus TPSY] Length = 333 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 123/311 (39%), Gaps = 15/311 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS AY +G + L + + Sbjct: 30 FVMKLLCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGHAVKVWGATPELGLLAGLL 89 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 G++MG +++ +G Y + TL ++++ ++ T G+ G+ R Sbjct: 90 AGALLGLVMGFFAIRRQGIYATMITLALAQMLFFAALQAP-FTGGEDGLQGVPR------ 142 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYYV L + ++ +I+ + + I++N+ Sbjct: 143 -------GKLFGVLDLSSDLTMYYVCLIVVVVAFLLIVRTIHSPFGQVLKGIKENEPRAI 195 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AGA + +S + V+ + ++GG+ +L Sbjct: 196 SLGYDTNRFKLLAFVISAAIAGLAGALKTLVLGFATLSDVHWSASGHVVLMTLVGGLGTL 255 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S +A+++ + + + + + + T + + + +L ++ Sbjct: 256 SGPLVGSAVVVLLENKIGELGTLLAQLTSIDWFNTLGESVTIVTGLIFVVCVLAFRRGIM 315 Query: 341 RLRTPSNFLER 351 R Sbjct: 316 GEIIAWLERRR 326 >gi|83311702|ref|YP_421966.1| ABC-type branched-chain amino acid transport system [Magnetospirillum magneticum AMB-1] gi|82946543|dbj|BAE51407.1| ABC-type branched-chain amino acid transport system [Magnetospirillum magneticum AMB-1] Length = 320 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 124/329 (37%), Gaps = 28/329 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +A A S Y+ + + L A +++ G++S + Sbjct: 4 WIKIAAFLAFSYIAVPLALGSNAYVIGLLVAALTIGGIAVAWALLGNLGGMVSFGHAAFF 63 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY +L R G ++ + V+ + + + P+L+ RG Y A+A L +EIF+ Sbjct: 64 GVGAYVSALLTLRGGWPVFPAMLVAGLGAAIASVATM-PALRLRGPYFALAILAYAEIFR 122 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + KPIT G AG+ RL ++ Y+V+L + + Sbjct: 123 ILATELKPITGGAAGLLSIPRLPN-------------VLGLDFGTKLGGYFVILTIVVAA 169 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + +RR+ A + + D++ A + K VS+ GM GAF A + Sbjct: 170 MAAYHLIRRSPYGLALKAMHDSEDATRVVGVNSTLLKAWMLVVSAFITGMVGAFNAHYIN 229 Query: 255 RISPDMFKFSENIIVISI-VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + PD + + + I GG ++S ++ V +L F Sbjct: 230 FLEPDYAFAGQWTTLAIVSAIFGGYRTVSGPLVGAVVVYLVDQL-------------AFK 276 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 H ++ + L +IL L+ + Sbjct: 277 PILPQGHQIVLGVLLGAMILFSPGGLMPM 305 >gi|86358914|ref|YP_470806.1| urea or short-chain amide ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86283016|gb|ABC92079.1| probable urea or short-chain amide ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 387 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 109/357 (30%), Gaps = 35/357 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 R++ +L +A++ P+L YI ++ + L Y + A L +V G G Sbjct: 13 RISVAVALLLAIAILVPILNLATSPSHPLHIPTYIMALFGKYLTYALLALALDLVWGFCG 72 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +LSL +A+G Y+ + R S + LP + D Sbjct: 73 ILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGDPVLPDFMVFLNWKELPWFWYGFDQFWF 132 Query: 125 ATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRS 165 A L++ + + + + D + + Sbjct: 133 AALMVLAVPGLLAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGMTD 192 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 F ++ LS +I + R+ +RD + L Sbjct: 193 FKDILGFNIQADGTRASLFAATAIFVALSLTIASAIVRSKFGKVLVGVRDAEGRTRFLGY 252 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + KL F VS+ G+AGA + I+P F + +I V+ +GG +L Sbjct: 253 RVEHFKLFTFVVSAMMAGIAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPI 312 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ G + G+ F + V L ++ Sbjct: 313 IGAILVNGGKTIFTGL--------------FPEFWLFALGGLFVAVTLFLPRGVVGT 355 >gi|312622382|ref|YP_004023995.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis 2002] gi|312202849|gb|ADQ46176.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis 2002] Length = 294 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 91/289 (31%), Gaps = 10/289 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + + G ++V G + L++ + +GAY + + L + + + Sbjct: 8 LINGITLGSIYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAYLSVTYLKLGLIPSLII 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S M GM++ + K + I+ LI + +L I G + Sbjct: 68 SMMFCSILGMLIEKFAYKPLRNSPRISALITAIGVSLLLENLMQIVMGADSRVFPRLVDE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +++ + ++L +RT + A R + + Sbjct: 128 KNYHLFQSKIVINNKQIYLLIITIILMIILNFVV---------KRTKVGKAMRAVSQDMD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG + I+P M + + GG+ Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + L + L G + + F + + Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 286 >gi|302059926|ref|ZP_07251467.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] Length = 529 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAMIGMV 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|169334653|ref|ZP_02861846.1| hypothetical protein ANASTE_01056 [Anaerofustis stercorihominis DSM 17244] gi|169257391|gb|EDS71357.1| hypothetical protein ANASTE_01056 [Anaerofustis stercorihominis DSM 17244] Length = 292 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 37/279 (13%), Positives = 83/279 (29%), Gaps = 12/279 (4%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 Y + A G ++V G + L++ +G Y G+ ++ ++ G+ Sbjct: 18 YALIALGYTMVYGIINLINFAHGDILMVGGYIGFFCAYTLGIGFIPATLIAMVVCALLGV 77 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 ++ + + + I LI + +L G + T Sbjct: 78 VIEKVAYRPLRNAPRITLLITAIGVSFLLEYAMMYFVGPD----------VKTYPSGFFG 127 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 + V L L ++ + +T I + R + + A + ++ Sbjct: 128 LGYISLGGLSISSDKLMVTLITLVLMVALQFLISKTKIGKSMRAVSSDPDAAQLMGVSVD 187 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 A F + SA +AG + A + + + + GG+ S+ Sbjct: 188 KAISFTFLIGSALAAVAGVMYGAMFTI--NPLSGMTPGLKAFIAAVFGGIGSIPGAIVGG 245 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 L + L G + + F + + Sbjct: 246 VSLGLIETLVSGYLSSAYKDAVAFAILIIILIVKPSGLL 284 >gi|167838443|ref|ZP_02465302.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Burkholderia thailandensis MSMB43] Length = 325 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 122/302 (40%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + A Y G + L + Sbjct: 27 FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGATPELGVLAGIA 86 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 87 AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 132 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + ++ +YYV+LG+ + I+ + + I++N+ Sbjct: 133 GLQGVPRGRLFGLVDLSSDLALYYVVLGVVACACFFIVRIVHSPFGQVLVAIKENEPRAT 192 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AGA + ++ + +V+ + ++GGM +L Sbjct: 193 SLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 252 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+++ + + + + + + + S T + + +L ++ Sbjct: 253 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIACVLAFRRGIV 312 Query: 341 RL 342 Sbjct: 313 GE 314 >gi|302336888|ref|YP_003802094.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293] gi|301634073|gb|ADK79500.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293] Length = 302 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 96/299 (32%), Gaps = 17/299 (5%) Query: 44 IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103 + IY + A G ++V G + L++ Y IGA++ +I+ +P A+ + Sbjct: 15 TRGSIYALLALGYTMVYGIIQLINFAHGEIYMIGAFTALIVAGVLT---LSGMPTLAIFA 71 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 A + + + ++LI ++ + + Sbjct: 72 IALVVAVVYAMGYGYTIEKMAYKPLRQAPRLSVLISAIGMSMFLQNYVLLAQTSDFQPFP 131 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 + F I ++L+ + + + +R T A R ++ + Sbjct: 132 ALIPEFAFLEPYRKIISSSQLFILITTAIVMVLLTVLIRYTRTGKAMRATSQDKTMAMLV 191 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + + F + S + G ++ +I+ F I +LGG+ S+ Sbjct: 192 GINVNKVISTTFIIGSGTAALGGLLISSHIGQINFY-IGFIAGIKAFVAAVLGGIGSIPG 250 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + +L G+ + + F + L L+++ R LL Sbjct: 251 AVLGSFVLGMTESFGTGLVSSDYEDVFAF-------------VFLILILIFRPEGLLGR 296 >gi|209885513|ref|YP_002289370.1| inner-membrane translocator [Oligotropha carboxidovorans OM5] gi|209873709|gb|ACI93505.1| inner-membrane translocator [Oligotropha carboxidovorans OM5] Length = 322 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 116/323 (35%), Gaps = 29/323 (8%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 +V +++ + A +Q L + +FA ++++G GLLS + Y Sbjct: 20 IVGFIVMAVLFAAVPLTGIYPYFVMQALCFALFACAFNLLIGYSGLLSFGHSMFLGTAGY 79 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +G+ L I + + +I G +++ +G Y A+ TL ++++ I ++ Sbjct: 80 FTAYSLKAWGVPPALGILIGVFAAAVLSVITGAIAIRRQGIYFAMITLALAQLMYFIYLR 139 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ + F + +E +YYV+L + L+ +I Sbjct: 140 --------------SPFTGGEDGIQGIPLGKLFGIFDLTHETTLYYVVLTVFLLAFLLIH 185 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + ++IR+N+ SL KL AF +S G+AG+ S Sbjct: 186 RIVNSPFGEVLKSIRENEPRAISLGYKADQYKLMAFILSGTLAGLAGSMKIFVSQNASLT 245 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 ++ + V+ + ++GG+ + +++ + + Sbjct: 246 DVHWTMSGEVVLMTLVGGLGTSFGPIVGAFVIVAMQQYLASF---------------GQW 290 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 + + +L ++ Sbjct: 291 VMVMQGAVFIICVLTFRRGIIGE 313 >gi|160899766|ref|YP_001565348.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160365350|gb|ABX36963.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 308 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 105/311 (33%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G ++V G +G+++ Y IGAY ++ S Sbjct: 12 LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGDIYMIGAYIGLVTLSAIGTTSGLPVWA 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I L++ VS ++G G+++ + K + LI + L W + G Sbjct: 72 IIGLMLVVSVFVTGVYGLVVEQVAYKPLRRSPRLVALISAIGMSIFLQNWVALGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + + +RF + +++ L + L++R + + A Sbjct: 129 ----RDMAVPSLLPGALRFGAEGGFEIYVPYSRILIIVVAIVLMVLLTLYIRHSRMGRAS 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + L F + + + G A + +++P F I Sbjct: 185 RACAQDMHMASLLGIDTNRVISFTFVLGAMLAAVGGVLIALAVGKLNPF-IGFLAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGVAETFAAAYISSEYKDIVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|86751526|ref|YP_488022.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86574554|gb|ABD09111.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 318 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 112/309 (36%), Gaps = 29/309 (9%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 YI + I LI++ A L++V G G LS + + +G Y I G S Sbjct: 24 MTGSNYIVGIAISGLIFLTAAAALNLVYGYAGQLSFAQLGFWGVGGYCAAIAVVDLGQSF 83 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 W I + +++ +++G+ + + TL + + I W +T G GI Sbjct: 84 WFGIAFAGVVNLLLSVVIGIVITRTTRHAFVVVTLTFALLAGLIARDWVGVTRGPLGIPG 143 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 +G + RF YY+ L ++ + + L+ + I + Sbjct: 144 LPPPSLMGFAFDTGARF--------------YYIALVFALIALAFLYSLKTSRIGLILKA 189 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 I+ N S KL+AF ++S GMAG +A + I P F + I Sbjct: 190 IKQNDPLVESQGIAPGPYKLAAFVIASVITGMAGGIYAFNLKVIDPSFLDFYYMQTFLII 249 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 VI+GG S + A A ++ + E N + + L V+ Sbjct: 250 VIIGGAGSFWAVVLAGAAMVVLPEALRF---------------SNELRMVIYGVVLVAVM 294 Query: 333 LMRSHSLLR 341 + + Sbjct: 295 MFMPRGVAG 303 >gi|291085382|ref|ZP_06352917.2| branched-chain amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291070807|gb|EFE08916.1| branched-chain amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 526 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 77/288 (26%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY I+ G + +I+ + Sbjct: 253 ITYGLLGVINMAHGEMLMLGAYCTWIVQQLMGQFFPHWLAWYPVIALPVAFLFTAAVGML 312 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + + Sbjct: 313 LER--GVIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPAWLSGGIQVYANL 370 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I VL + L L +T + R + N+ + AF + Sbjct: 371 ILPWNRIVVLGFATLVLFFTWLLLNKTRLGLRVRAVTQNRNMAACCGVPTGRVDMLAFGL 430 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + S I +V+LGG+ L+ A L ++ Sbjct: 431 GSGIAGLGGVALSQLGNV--GPELGQSYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 488 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++ R L L+ Sbjct: 489 LEPQVGAVLGKIIILVLIILFIQK-------------RPQGLFALKGR 523 >gi|163794738|ref|ZP_02188708.1| inner-membrane translocator [alpha proteobacterium BAL199] gi|159180011|gb|EDP64536.1| inner-membrane translocator [alpha proteobacterium BAL199] Length = 301 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 98/309 (31%), Gaps = 26/309 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----YVILGSRYGLSIW 93 + + IY + A G ++V G +G+++ Y I A+ + + ++I Sbjct: 8 MINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGEIYMIAAFVAVIAFTALSNAPLVVAIL 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L++ + +I+ A G + + + +A LI + L + + G V Sbjct: 68 LVLLFTMLITAAYGWTIERVAYRPLRGSFRLAPLISAIGMSIFLQNYVQLVQGARNKPVP 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 V+ V +++ L ++ T++ R Sbjct: 128 P-------MVQGGFTIMDDGGFTVQLSYLQIMIVVTTVVLMVCFTQFINTTSLGRQQRAC 180 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 ++ L + F + +A +AG + F + + Sbjct: 181 EQDKTMAALLGVNVDRTVSMTFVMGAALAAVAGVMVTLYYGVVDFY-LGFLAGLKAFTAA 239 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ SL ++ + + G + + F L LV++ Sbjct: 240 VLGGIGSLPGAMLGGLLIGLIEAVWAGYFSSEWKDVAAFS-------------ILVLVLI 286 Query: 334 MRSHSLLRL 342 R LL Sbjct: 287 FRPQGLLGR 295 >gi|307301547|ref|ZP_07581307.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] gi|306903604|gb|EFN34192.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] Length = 333 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 113/325 (34%), Gaps = 27/325 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++L L ++ +I + L +V G G+ +L + GA Sbjct: 22 LAGLAVILVLAGIGYLFFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGA 81 Query: 79 YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ I + L++ + G+ G+ L+ G + ++ + +F Sbjct: 82 YAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEFA 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 K P T G G+ +G +F ++ Y + + + + Sbjct: 142 NKASPWTGGSDGLAGIAPDPLIGL------------FAFDLWGRTAYVFGVVLLAIVFVL 189 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + R+ R IR++ ++ + A L + +S A G+ GA A S + Sbjct: 190 LRLVVRSPFGMLCRGIREDPIRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVG 249 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 D F+ + + +++LGG SL T + + +L N +++ Sbjct: 250 LDSLSFTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSAANPFHW----------- 298 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 T++ L V+L L Sbjct: 299 ---LTMVGALLIAVVLFAPKGLYGT 320 >gi|288920305|ref|ZP_06414618.1| ABC transporter related protein [Frankia sp. EUN1f] gi|288348329|gb|EFC82593.1| ABC transporter related protein [Frankia sp. EUN1f] Length = 952 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 103/261 (39%), Gaps = 4/261 (1%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + IL Y + A ++++ G G LSL + +GA + GL + L A+ Sbjct: 347 LYTVILGYAICAASVTVLTGWAGQLSLGQMAFAGLGALTAA--SLHRGLRVPLGESTVAL 404 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + +GL SL A+ + + + + ++ Sbjct: 405 EPLPFPLAVGLASLVTALLAAAVGAGALRVRGLLLAVSTFAFGMAAEQYFYRREVFHDEG 464 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + + R V + YYV+L + + ++ LRR+ + +RDN Sbjct: 465 SRSASFRRDTVFGIDVTSQRAYYYVVLAVLAVVLVVVARLRRSGVGRTTVGVRDNPVTAA 524 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS--ENIIVISIVILGGMT 279 + + KL +FAV+ G+ G+ A + ++ F +++ V+SIV++GG+ Sbjct: 525 AYTVSATRVKLRSFAVAGGIAGLGGSLLAGAVQTVTYTDRYFLTADSLAVVSIVVVGGLG 584 Query: 280 SLSKIAKATAILIGVVELCCG 300 S+ + ++G+ + G Sbjct: 585 SVYGPVLGSLWVVGLPAIFPG 605 Score = 46.8 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 26/220 (11%), Positives = 71/220 (32%), Gaps = 8/220 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A G+ +V + +++ +G+ + +L R+ + W +P+ Sbjct: 9 LFDGVVNGLVIGLLAVGIVLVHRATRVVNFAVANIGLVGSALFALLVVRWNVPYWGALPI 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + A G + L ++ + L+ + + + D + Sbjct: 69 ALATGTAFGAAVDLAVVRRLFAAPRVIMLVATIGVAQLALTVV--------TAYPDLDDY 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 P+ + VL+ + L+ + +L RT + + R DN + Sbjct: 121 PTARYPVPWNGTWTPTPELRITGAQLSVLVAVPLLALLLGWFLERTVLGRSVRAAADNPE 180 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + +A + + +A + Sbjct: 181 LARLQGISPKVVSTAVWAAAGLLGTVCLVLISAQNQSLEQ 220 >gi|33597166|ref|NP_884809.1| putative ABC transport protein, inner membrane component [Bordetella parapertussis 12822] gi|33601010|ref|NP_888570.1| putative ABC transport protein, inner membrane component [Bordetella bronchiseptica RB50] gi|33573593|emb|CAE37875.1| putative ABC transport protein, inner membrane component [Bordetella parapertussis] gi|33575445|emb|CAE32523.1| putative ABC transport protein, inner membrane component [Bordetella bronchiseptica RB50] Length = 309 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 97/305 (31%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G +GL++ IGA + ++ + Sbjct: 8 IINGLTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATMVAAALVGGDPSTSAF 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +G ++ + +A + + + + Sbjct: 68 AVLGAGL--LVSVPLCMAVGWTAERVAYRPLRRAPRLAALITAIGVSIILQNVAMMVWGR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ F + +++ + +++L + +T + A R N++ Sbjct: 126 NYLNFPQVLTPAVFEIGGARMSMLQIAIVVIAALIMGALLLVVHKTRLGTAMRATAQNRE 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I +AF + SA +AG +S F + + +LGG+ Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAIAGMMVTTYYG-VSQYTMGFMLGLKAFTAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G L + + L +V++ R Sbjct: 245 GNLVGAMAGGLLLGIIESLGSGYIGDLTGGFLG-----SHYQDVFAFVVLVMVLIFRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|325273633|ref|ZP_08139849.1| inner-membrane translocator [Pseudomonas sp. TJI-51] gi|324101237|gb|EGB98867.1| inner-membrane translocator [Pseudomonas sp. TJI-51] Length = 495 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 222 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLVQRYAPGAIEFYPLIALPVAFAISAGVGMA 281 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W I + + + + + + Sbjct: 282 LER--TVIRHLYGRPLETLLATWGISLILIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 339 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + L L RT + R + N+ + + AF + Sbjct: 340 VLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 399 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L +L Sbjct: 400 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 457 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 458 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 492 >gi|171780213|ref|ZP_02921117.1| hypothetical protein STRINF_02001 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281561|gb|EDT46996.1| hypothetical protein STRINF_02001 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 294 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 104/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ Y +GA+ S ++ WL + V Sbjct: 10 LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFIGYYAISTLHMNFWLALIV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + GM++ + + IA LI + L G Sbjct: 70 TMVATAFIGMVIEFLAYRPLRHSTRIAALITAIGVSFFLEYGMVFLVGANTRS------- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + V +L+ L ++ L +++T + A R + + Sbjct: 123 ----FPQAIDIVSYKLGPVTVTNIQLLILVVSLVLMVALQLIVKKTKMGKAMRAVSVDSD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I P M + I +LGG+ Sbjct: 179 AAELMGINVNSTISFTFALGSALAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L + + ++ L +++L+R Sbjct: 238 GIIPGAALGGFVIGILETL-------------SISVNLSSYRDAIVYAVLIIILLIRPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|121595557|ref|YP_987453.1| inner-membrane translocator [Acidovorax sp. JS42] gi|222111778|ref|YP_002554042.1| inner-membrane translocator [Acidovorax ebreus TPSY] gi|120607637|gb|ABM43377.1| L-isoleucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-leucine ABC transporter membrane protein [Acidovorax sp. JS42] gi|221731222|gb|ACM34042.1| inner-membrane translocator [Acidovorax ebreus TPSY] Length = 308 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 105/311 (33%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G ++V G +G+++ Y IGAY ++ S Sbjct: 12 LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGDIYMIGAYIGLVTLSAVGVQSGLPVWA 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I L++ V+ I+G G ++ + K + LI + L W + G Sbjct: 72 IIALMLVVAVAITGVYGFVVEQVAYKPLRSSPRLVALISAIGMSIFLQNWVALGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + + +RF V ++ L ++ L+++ + + A Sbjct: 129 ----RDMAVPSLIPGALRFGSEGGFEVYVPYSRILIIAVAVVLMIALTLYIQHSRMGRAS 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + L F + + + G A + +++P F I Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFILGAMLAAVGGVLIALAVGKLNPF-IGFIAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMLGGVILGVAETFAAAYISSEYKDIVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L+R LL Sbjct: 291 ILLVRPTGLLG 301 >gi|297566882|ref|YP_003685854.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] gi|296851331|gb|ADH64346.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] Length = 320 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 97/303 (32%), Gaps = 10/303 (3%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIPVSAM 101 + +Y M A G ++V G L L++ + IGA + V + I L+ + Sbjct: 17 LLLGFVYAMIALGYTMVYGVLELINFAHSEIFMIGAVAGVEVFRYLVPVIPNALLLLLIA 76 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + + + R Y + ++ + + + + ++ Sbjct: 77 LVIGAAISGTVAVWVERLAYRPLRKRGAVNRLVPLITAIGVSFVLQDLVRLIEAIWHNEF 136 Query: 162 TVRSLIRF---FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +R F + ++ +++ + + + RT + A R + + Sbjct: 137 FLRINSLPALEQSFSLLGIFIQLKSIILVVVSILMLLGLSYLVNRTKLGTAIRAVAQDMN 196 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + A G+AG FA ISP + F + + +LGG+ Sbjct: 197 TAALMGINPDQIISRTFLIGGALAGVAGVLFAVQYTTISPYV-GFLPGLKAFTAAVLGGI 255 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + L N + + L L++L R Sbjct: 256 GNIPGAMVGGLVLGQLETLAGTYMPTLTNGNFG-----TEYKDVIAFLILILLLLFRPQG 310 Query: 339 LLR 341 LL Sbjct: 311 LLG 313 >gi|222109394|ref|YP_002551658.1| inner-membrane translocator [Acidovorax ebreus TPSY] gi|221728838|gb|ACM31658.1| inner-membrane translocator [Acidovorax ebreus TPSY] Length = 635 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 113/305 (37%), Gaps = 33/305 (10%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + I I +FA L ++G GL S + +GAY +L + + + Sbjct: 344 SYATVLLTDIAIAALFAASLHCILGPGGLHSFGHAAYFGLGAYGAALLVRWLDWPMGMAL 403 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++ A ++ G ++ G L + TL ++I I +W T G GI Sbjct: 404 LLGPLVAAAGALVYGWFCVRLSGVSLTMLTLAFAQITWAIAYQWDGFTGGSNGITGVWPP 463 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + Y+++L + ++ + + A R RD+ Sbjct: 464 QW------------------AAQGAGFYWLVLALAVAGIYLLRRMLFAPLGWALRAARDS 505 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + +AF V+ G+AGA + S+ ++PD S ++ + +V+LG Sbjct: 506 ALRADAIGIDVRGVQWAAFVVAGLLAGLAGALYVFSKGSVAPDALGVSRSVDGLVMVLLG 565 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM L+ + + + Y+ L+ + L++L+ Sbjct: 566 GMQQLAGPVVGAGVFTWLHDTVARSTDYWRA---------------LLGGIMLLLVLLFP 610 Query: 337 HSLLR 341 + Sbjct: 611 QGISG 615 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 96/306 (31%), Gaps = 17/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLI 96 + + + A GLS++ G + +++ Y +G Y L R G W + Sbjct: 10 LLNGLAGASTLFLVAAGLSLIFGVMRIVNFAHGSFYMLGLYLAYALVERLGDALGFWPAL 69 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + G G + + L+ + L+ + ++ G ++ Sbjct: 70 LLAPLAVGLLGAAVEVLLLRRIYRAPELLQLLATFALVLVIKDAALWLWGPEELFGPRAP 129 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + + +++ + + L L RT R + Sbjct: 130 GLEGA----------VDLLGRRFPAYDLFLIAVGPLVLVLLTLLLTRTRWGTLVRAATQD 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + S FA+ + G+ GA +V++G Sbjct: 180 REMVGALGVNQAWLFTSVFALGALLAGLGGALQLPREPA--SLELDMLTIGAAFVVVVVG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL A ++ EL + + + +F + + + V++ R Sbjct: 238 GMGSLPGAFVAALVIA---ELKAVCIWLGVVEVAGVEVAFPRLTLVVEFLVMAAVLIWRP 294 Query: 337 HSLLRL 342 + Sbjct: 295 WGFMGR 300 >gi|94313402|ref|YP_586611.1| branched-chain amino acid inner-membrane translocator [Cupriavidus metallidurans CH34] gi|93357254|gb|ABF11342.1| Branched-chain amino acid inner-membrane translocator (inner-membrane translocator) [Cupriavidus metallidurans CH34] Length = 332 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 120/303 (39%), Gaps = 25/303 (8%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIPVS 99 ++ ++LIY M A ++++G GLLS I + +G+Y+ + +R GL + + + + Sbjct: 32 TLATEVLIYGMAAMACNLLLGYTGLLSFGQGIFFGLGSYAVGLALTRAGGLPMPVALLGA 91 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +I A ++G S++ RG Y + TL +++F + IT G G+ R Sbjct: 92 VVIGAATAALVGWFSIRQRGTYFVMLTLAFAQMFYFLAYTAPGITGGDNGLLDIPRPP-- 149 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 I + Y + + + +++L + + + IRDN++ Sbjct: 150 -------ISIGGHALIDLTSSWGFYGFVAVLFLIVFALVLRVTESVLGRTLLAIRDNEER 202 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 ++ KL AF +S A G+AGA A + + +++ + ++GG + Sbjct: 203 ALAVGYNTRAFKLLAFVISGAVTGLAGALHAMLTGIAPLANIDYHASEMILIMTVIGGTS 262 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ A + + + + + L+ L V L L Sbjct: 263 NIFASVLGAAFYVLLADWLSTLWPRW---------------LMLLGFLLIAVSLFMQRGL 307 Query: 340 LRL 342 L Sbjct: 308 WGL 310 >gi|326316890|ref|YP_004234562.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373726|gb|ADX45995.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 328 Score = 80.7 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 122/278 (43%), Gaps = 14/278 (5%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + + + + +IL++ + A L++++G G++S +GAY+ IL Sbjct: 32 PTIAQALDEGFYIGVASRILVFALAATSLNLILGFGGMVSFGHAAFVGVGAYAVGILMQE 91 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 S W+ P + +++G SL+ +G Y + TL +++ +++ K G+ Sbjct: 92 GIASAWIAWPAAIAAGALFALVIGWVSLRTQGVYFIMITLAFAQMLFYLMVSLKA-YGGE 150 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ +A R P + + YY +L +C L + L Sbjct: 151 DGLSLASRSQVG-------------PWLDLADDARFYYCVLAICVLVFVGLARLLNARFG 197 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 +A + IR+N+ +L + KL+AF ++ A G+AGA A +SP ++S++ Sbjct: 198 HALQGIRENETRMAALGFAVYRTKLAAFTLAGAIAGLAGALLANQAGFVSPAALQWSQSG 257 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 +++ +VILGG+ L + + E+ ++ Sbjct: 258 MLMVMVILGGVGRLYGGFVGAVAFLLIEEVLAAHTMHW 295 >gi|293606220|ref|ZP_06688583.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815367|gb|EFF74485.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 309 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +GL++ IGA + + + Sbjct: 8 LINGVTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATTIAISLVGGDPGV--S 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G ++ + +A + + + + Sbjct: 66 AFVVLGVGLLVSVPLCMAVGWTAERVAYRPLRRAPRLAALITAIGVSIILQNVAMMAWGR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ F + +++ + ++ + +T + A R N++ Sbjct: 126 NYLNFPQVLSPRVFEFAGARMSTLQIAIVVIAALIMGGLLAIVHKTRLGTAMRATAQNRE 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I +AF + SA +AG A +S F + + +LGG+ Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAVAGMMVATYYG-VSQYTMGFMLGLKAFTAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + L G L + L LV++ R Sbjct: 245 GSMVGAMVGGLLLGVIESLGAGYIGDITGGFLG-----SHYQDVFAFFVLVLVLIFRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|17230028|ref|NP_486576.1| permease protein of branched-chain amino acid ABC transporter [Nostoc sp. PCC 7120] gi|17131628|dbj|BAB74235.1| permease protein of branched-chain amino acid ABC transporter [Nostoc sp. PCC 7120] Length = 316 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 103/319 (32%), Gaps = 31/319 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--------------VIL 84 + + +Y +FA G ++V LG+++L + +GAY Sbjct: 10 LLNGLSIGSVYAIFALGYTLVYSILGIINLAHGAIFTLGAYFTYALMGGTFGFNGLLANA 69 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 L + + + + ++G G+ M + + + L + ++ I Sbjct: 70 TLPIQLPFAMALIMGSSLAGLVGVAMERIAFQPLRKKGSDTLLTVVSSLGVAVVIVNLIQ 129 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G F + + + A + ++ RT Sbjct: 130 YLVGAESYTFPANTFGN--LPPAFNFGTLEKPIPIRSVQVVIFTVSVVIVAILTYFINRT 187 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A + I ++ L + F +SS G+AG A+S I+ F Sbjct: 188 KYGKAIQAIAEDATTASLLGINSDRFIVLTFFISSFLAGLAGTLVASSV-SIAGPYFGIG 246 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + +++++LGG+ S+ ++ V L ++ + Sbjct: 247 FGLRGLAVIVLGGLGSIPGAVLGGLLIGVVEALV--------------PSDYSGYKDAVA 292 Query: 325 VIALFLVILMRSHSLLRLR 343 LF+++L+R LL R Sbjct: 293 FGILFIMLLVRPQGLLGRR 311 >gi|308233572|ref|ZP_07664309.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Atopobium vaginae DSM 15829] gi|328943975|ref|ZP_08241440.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Atopobium vaginae DSM 15829] gi|327491944|gb|EGF23718.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Atopobium vaginae DSM 15829] Length = 290 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 98/303 (32%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G + LL+ +GAY + + G+ I Sbjct: 6 ILNGLQVGSIYALVALGYTMVYGIILLLNFAHGDIIMVGAYISWLCLVQLGIGPIPAIIA 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+++ + + ++ LI + L + G + + Sbjct: 66 TIIVCTLLGIVIEKLAYAPLRNAPRLSLLITAIGVSYFLENCAQLIFGADAKVLPNFFEV 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ A + L +++T + A R + ++ Sbjct: 126 SSSEFMG-----------LPISTVAVITIVVTGISCAVLTLLVKKTKLGAAMRAVSEDMG 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ G+ ++ + + SP M +LGG+ Sbjct: 175 AARLMGINVNTVISFTFALGCVLAGIGSVLYSMAYAQASPTM-GVMLGTKAFVAAVLGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ L + ++ + L +V++++ Sbjct: 234 GSIPGAVIGGLVVGFAEVLVSACGLSVWKDA-------------IVFLLLIIVLVVKPTG 280 Query: 339 LLR 341 +L Sbjct: 281 ILG 283 >gi|319779522|ref|YP_004130435.1| High-affinity branched-chain amino acid transport system permease protein LivH [Taylorella equigenitalis MCE9] gi|317109546|gb|ADU92292.1| High-affinity branched-chain amino acid transport system permease protein LivH [Taylorella equigenitalis MCE9] Length = 308 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 106/311 (34%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--------GSRYGL 90 + + IY + A G ++V G +G+++ Y IGAY +I + Sbjct: 12 LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLITLAVLGVDGSIPVPV 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I ++ VS +++G G + + + + + +LI + L W + G Sbjct: 72 LIGCMLLVSVIVTGVYGYAVERVAYRPLRNSPRLISLISAIAMSIFLQNWVALGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + + F ++ ++ + L ++ L+++++ + A Sbjct: 129 ----KDVAVPNILPGSFVFTFSNDFTIVISYSRILIIAVVFVLMVALTLFIKKSRMGRAS 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + + L F + + + G A + +++ F I Sbjct: 185 RACSQDIQMANMLGIDTNKVISVIFILGAVLAAVGGVLIAITIGKLN-PFIGFIAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ I+ + + ++ F L L Sbjct: 244 TAAVLGGIGSVPGAILGGLIIGVTETMAAAYIASEYKDIVAFG-------------LLVL 290 Query: 331 VILMRSHSLLR 341 ++L + LL Sbjct: 291 ILLFKPSGLLG 301 >gi|303233425|ref|ZP_07320094.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Atopobium vaginae PB189-T1-4] gi|302480554|gb|EFL43645.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Atopobium vaginae PB189-T1-4] Length = 290 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 101/304 (33%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + Q IY + A G ++V G + LL+ GAY I+ + GL +++ + + Sbjct: 6 IINGLQQGSIYALVALGYTMVYGIIQLLNFAHGDIIMAGAYVCWIIMVQLGLPVYIAVVL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ + ++ LI + L + G Sbjct: 66 APLACMVLGILIDKIAYAPLRSSSRLSLLITAIGVSYFLENAVQLIFGADSKV------- 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +I + + ++ ++ L +++T + A R + ++ + Sbjct: 119 ----LGRMIDTNTIDIAGFPVSVVALITIVLTALGCVALTLLVQKTKLGCAMRAVSEDMQ 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S G+ + + + P M +LGG+ Sbjct: 175 AAQLMGVNVNTIISVTFALGSLLAGVGSVLYCMAYTQAYPTM-GVMLGTKAFCAAVLGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ + + + ++ + L +++ + Sbjct: 234 GSIPGAVLGGFVVGFAEVIVSALGLSLWKDA-------------VVFLLLIAILVFKPSG 280 Query: 339 LLRL 342 +L Sbjct: 281 ILGT 284 >gi|253998411|ref|YP_003050474.1| urea ABC transporter permease UrtC [Methylovorus sp. SIP3-4] gi|313200486|ref|YP_004039144.1| urea ABC transporter permease urtc [Methylovorus sp. MP688] gi|253985090|gb|ACT49947.1| urea ABC transporter, permease protein UrtC [Methylovorus sp. SIP3-4] gi|312439802|gb|ADQ83908.1| urea ABC transporter, permease protein UrtC [Methylovorus sp. MP688] Length = 388 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 43/328 (13%), Positives = 92/328 (28%), Gaps = 36/328 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + ++ + L Y A L ++ G+ G+LSL + + +G Y + Sbjct: 34 DIFRLNLVGKYLTYAFVALSLVLLWGNGGILSLGQGMFFGLGGYCMAMFLKLEASDPIST 93 Query: 96 IPVSAMISGACGMIMG-----LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + F+ I +++ +I + G+ Sbjct: 94 KIQTTPGIPDFMDWNQLTALPWFWEPFKSLPFTILAILIVPTIFAYIIGFAMFKRRVGGV 153 Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 Y A + L + + +YYV + F Sbjct: 154 YFAIITQAIALILSILIVGQQGYTGGVNGITDLKTMLGWDIRTDSAKYILYYVNAILLFG 213 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++ + +RD ++ + K+ F V++ + GA F Sbjct: 214 CIFLSRYILTSKFGMLLLAMRDKEERVRFSGYDVSDFKIFTFCVAAMISAIGGAMFTLQV 273 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG SL T ++ + F Sbjct: 274 GFMSPSFVGIVPSIEMVIFAAVGGRMSLIGAVYGTLLVNYGKTV--------------FS 319 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ LM V++ L Sbjct: 320 ETYPELWLFLMGGLFIAVVMFFPDGLAG 347 >gi|159046266|ref|YP_001541938.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12] gi|157914025|gb|ABV95457.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12] Length = 342 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 61/336 (18%), Positives = 127/336 (37%), Gaps = 27/336 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + A++ + + + A + + + LI A + I++G GLLSL + + Sbjct: 14 IFFAALLGIVAIGVVFAAATGDVFYLRLATEALILGGLALSVDILLGFGGLLSLGQALYF 73 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAY + R S WL + + + S G++ GL + + RG Y A+ T M+++ Sbjct: 74 GIGAYVSAL-VLRDVPSFWLALGTATLASLVAGIVGGLIANRVRGVYFALITFGMAQVVA 132 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I+ + + V L + + + + L + + Sbjct: 133 KIVYNTREL-----------GASDGLIGVPVLEIPLGVATISAGDPVAFFLLTLAVLTVL 181 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + +L T + N+K L + + ++ ++ V++ G++GA + R Sbjct: 182 YGAVAYLLTTPFGRLVIANKANEKRVPFLGYSTWWPRMVSYVVAALVAGISGALYPMLRG 241 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP++ F+ + + +VILGG+ +L+ IL + + + Sbjct: 242 FVSPELMFFATSGNAVIMVILGGVGTLAGALYGAMILTFLKSVVGSYTEH---------- 291 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 H + + IL L+ L P Sbjct: 292 -----HLIAIGLIFICAILFLPKGLIGLIKPRLETR 322 >gi|17546758|ref|NP_520160.1| ABC transporter permease [Ralstonia solanacearum GMI1000] gi|17429057|emb|CAD15741.1| probable permease transporter transmembrane protein [Ralstonia solanacearum GMI1000] Length = 396 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 96/349 (27%), Gaps = 32/349 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +L + V L Y ++ +I+ Y + A L +V G G+LSL Sbjct: 28 AALLVCVGVPVCALAVPAGHPLHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHG 87 Query: 72 IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113 + +A+G Y+ + +++ L Sbjct: 88 LFFALGGYAMGMYLMRAIGRDGVYQSDLPDFMVFLDWKELPWFWHGTGHFAWAALLVVLV 147 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 + A + +I + + + R +P Sbjct: 148 PGVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGYP 207 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + V ++ L+ + + IRD + + + KL Sbjct: 208 IAAVSTRTVLFVATFIALVLAFIACRAIVTSKFGRVVTAIRDAEARVMFSGYSPLGYKLF 267 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 + S+ G+AGA + I+P +I + V +GG +L ++ G Sbjct: 268 VWTFSAVLCGIAGALYVPQVGIINPSEMSPGNSIEMAVWVAVGGRGTLVGPIVGAFLVNG 327 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ LV L + +L L Sbjct: 328 AKTVLTAW--------------VPEYWLFVLGAVFVLVTLFLPNGVLGL 362 >gi|328952594|ref|YP_004369928.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] gi|328452918|gb|AEB08747.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] Length = 339 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 105/336 (31%), Gaps = 23/336 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 ++ ++ +L +L F + Y A +I GLL Sbjct: 17 KVMSRHIVVKILISAAVMLFFGGPLFLPGADLYLLVFGLACFYATLALAWNI-FALSGLL 75 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 SL + +GAY V+L + + I + G + L + RG Y A+A+ Sbjct: 76 SLGHAAFFGLGAYGAVLLENWGHWPTYPAIMAGGALGMVYGCLWSLAFQRLRGAYFALAS 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + ++ W+ +T+G GI RL + Y Sbjct: 136 LAAMEIPRVVIDNWETLTSGSLGIVGISRL--------PSLSIGSLVIPVGDNLQSQYCF 187 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 L + + R+ R IR +++A L + + +SS G+ G Sbjct: 188 LFFLMAAVGLLHWRAMRSKWGWGLRAIRGDEEAAEVLGVNVFGYRCLTLCLSSYITGVCG 247 Query: 247 AFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 +A I P M F + + + GG ++ L + +L Sbjct: 248 GVYAHLVGLIEPAMVFNLQLAAFPLVLSLFGGRYAVLGPIIGALTLYPLDQLV------- 300 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 H + + + L I L Sbjct: 301 ------LQPWLPQGHAAIYGLVIILTIFFFPRGLAS 330 >gi|312135194|ref|YP_004002532.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL] gi|311775245|gb|ADQ04732.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL] Length = 294 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 92/289 (31%), Gaps = 10/289 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + + G ++V G + L++ + +GAY + + L + + + Sbjct: 8 LINGITLGSIYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAFLSVTYLKLGLIPSLLI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ + K + IA LI + +L I G + Sbjct: 68 SMIFCSVLGILIEKLAYKPLRNSPRIAALITAIGVSLLLENLMQIIMGADSRVFPRLVAE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ Y+L+ L + +++T I A R + + Sbjct: 128 KNYH---------LFQGRIVVNNKQIYLLVITVLLMIILNFIVKKTKIGKAMRAVSQDMD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG + I+P M + + GG+ Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + L + L G + + F + + Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 286 >gi|296162347|ref|ZP_06845140.1| inner-membrane translocator [Burkholderia sp. Ch1-1] gi|295887380|gb|EFG67205.1| inner-membrane translocator [Burkholderia sp. Ch1-1] Length = 356 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 92/307 (29%), Gaps = 2/307 (0%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L L++ A GL+ + G G+LS + + Y+Y I Sbjct: 22 LLALCLPLVVDANTSGNLAYCLLWAFSALGLAAMWGYGGILSFGQTAFFGLSGYTYGIFT 81 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILIKWKPIT 144 YG + + ++ L + + ++ +L + T Sbjct: 82 LNYGDTWFESWLGLGAGIVVSIVVAALIGYMIFYGRIKGVFIGIVTLSVTLVLETFMSQT 141 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY-EIFMYYVLLGMCFLSASIILWLRR 203 G RL +P + + YY++L + +I+ L Sbjct: 142 AGPQWAIGEARLNGYNGMGGMPQLTIPWPGGPLTLENVSFYYLVLLLLIAVYAIMRKLLD 201 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 IR+N + L I +L F + G++GA + I+P Sbjct: 202 GTFGLTLIAIRENPQRAEMLGVDIRRHQLMVFVLGCTLGGLSGALYTIWGSYITPSTMGL 261 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + + + V G S+ TA+L+ + + Y LL + Sbjct: 262 TAAAMPVIWVATSGRKSIGGTIIGTALLVWLSQNLAVYGSQYALILLGAILLIVVLAAPE 321 Query: 324 MVIALFL 330 ++ Sbjct: 322 GLLPFVA 328 >gi|220904747|ref|YP_002480059.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869046|gb|ACL49381.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 302 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 92/299 (30%), Gaps = 17/299 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY + A G ++V G + L++ Y +GA++ +++ G+ + + + Sbjct: 14 LTRGSIYALIALGYTLVYGIIELINFAHGEVYMLGAFTALLVAGVLGVYGFPAGGILVVA 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + + LI ++ + + Sbjct: 74 ALAAIVWCAAYGYTLEKVAYKPLRGA---PRLSPLISAIGMSIFLQNYVLLAQTSDFVPF 130 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 L + + +L S+ L++R T + A R N+K Sbjct: 131 PSLLPEMDFLEHIGYVMGPSDFLILAVSTIAMVSLSLFIRYTRMGKAMRATAQNRKMALL 190 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L F + S + G A+ +++ F + + +LGG+ S+ Sbjct: 191 LGINADRIISLTFIIGSGLAALGGVLIASHMGQVNF-GIGFLAGLKAFTAAVLGGIGSIP 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +L G + +L F L L+++ R +L Sbjct: 250 GAMVGGLVLGLAESFTTGYFSGNYEDMLAF-------------AILILILIFRPDGILG 295 >gi|312127555|ref|YP_003992429.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis 108] gi|311777574|gb|ADQ07060.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis 108] Length = 294 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 92/289 (31%), Gaps = 10/289 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + + G ++V G + L++ + +GAY + + L + + V Sbjct: 8 LINGITLGSVYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAYLSVTYLKLGLIPSLIV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + GM++ + K + I+ LI + +L I G + Sbjct: 68 SMVFCSILGMLIEKFAYKPLRNSPRISALITAIGVSLLLENLMQIIMGADSRVFPRLVAE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ Y+L+ L + +++T I A R + + Sbjct: 128 KNYH---------LFQDRIVVNNKQIYLLIITVLLMIILNFVVKKTKIGKAMRAVSQDMD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG + I+P M + + GG+ Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + L + L G + + F + + Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 286 >gi|221369306|ref|YP_002520402.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131] gi|221162358|gb|ACM03329.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131] Length = 332 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 118/310 (38%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +G I + Sbjct: 45 FLMKLLCFALFAAAFNLLLGYTGLLSFGHATFFGGSAYFTAHAVKVWGWPPEFGILLGVA 104 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + A G++MG+ +++ +G Y A+ TL +S++F ++ Sbjct: 105 GAAALGLLMGVIAIRRQGIYFAMITLALSQMFFFFCLQAAFTHG--------------ED 150 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MY+ +LG L I + + IR+N+ Sbjct: 151 GIQSVPRGHLFGVIDLSNATNMYFFVLGTFTLGMLAIWRFVNSPFGMILKAIRENEPRAI 210 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AG A + + + VI + +LGG+ +L Sbjct: 211 SLGYSVAEYKLGAFVMSAALAGLAGGVKALVFQFATLTDVGWQMSGEVILMTLLGGIGTL 270 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +A+++ + F T + + +L+ ++ Sbjct: 271 VGPVVGSALVVTLQNYLATSQFPV---------------TIITGLVFMACVLLFRRGIVG 315 Query: 342 LRTPSNFLER 351 S R Sbjct: 316 EFYASRLGRR 325 >gi|291518119|emb|CBK73340.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Butyrivibrio fibrisolvens 16/4] Length = 293 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 106/305 (34%), Gaps = 23/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IGAY + S G+ + I Sbjct: 5 TYLINGLSLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGAYVVFMCMSNSGMPAVVSI 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +S + A GMI+ + K +A LI + L + G + + Sbjct: 65 VISIVCCTALGMIIEKIAYKPLRKATNLAVLITAIGVSYFLQNMALMIFGSNPVSFTSVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + G ++ + ++ + +++ +++ T A R + ++ Sbjct: 125 KWQGISLAG---------GALKITGNAIITIITCVVIMIALMWFVKNTKPGQAMRAVSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++A + + FA+ S +AGA +S ++P I + + G Sbjct: 176 KEAAILMGINVNATISLTFAIGSGLAAIAGALLCSSYPSLTPYT-GSMPGIKAFTAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ G +L + ++ L +V+L++ Sbjct: 235 GIGSI-------------PGALIGGLLLGIIEILAKAYISSQLADAIVFAVLIIVLLVKP 281 Query: 337 HSLLR 341 +L Sbjct: 282 TGILG 286 >gi|332558744|ref|ZP_08413066.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] gi|332276456|gb|EGJ21771.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] Length = 410 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 99/353 (28%), Gaps = 36/353 (10%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L G + L + A + +V G G+LSL + +A+G Y + Sbjct: 28 LASHAYGTAFLSTSFVKTLGKTLCLCLVALAMDLVWGYAGILSLGHMAFFALGGYMIGMW 87 Query: 85 GSRYGLSIWLL-------------------------------IPVSAMISGACGMIMGLP 113 ++ +P + + + + L Sbjct: 88 LMYARTEDIVVQALSNAPLPATPQEISDGVASQIFGVVGGAELPAVWAFAHSLPLQLALV 147 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L L L + + A + L P Sbjct: 148 VLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALALHLFQNDAGLRGNNGLSGLQNIP 207 Query: 174 SSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + ++ ++ G L + W+ + R IRD+++ L ++ Sbjct: 208 GLVQVSQDRLSVWFFWASAGALALGYLLAAWIVSGKFGSVLRAIRDDEQRVRFLGYSVEG 267 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL F +++ +AGA + I+P +I + V +GG L A Sbjct: 268 YKLFIFTLTAVIAAIAGALYYPQAGIINPAELAPIASIYLAVWVAIGGRGRLYGAVIGAA 327 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + G SL + L+ +A LV L + L Sbjct: 328 FVSLLSTWFTG-GRAPVLSLGFVTIQWVDWWQILLGLAFVLVTLFAPQGIGGL 379 >gi|126667012|ref|ZP_01737987.1| ABC-type transport system permease protein II (probable substrates branched-chain/neutral amino acids) 2 [Marinobacter sp. ELB17] gi|126628418|gb|EAZ99040.1| ABC-type transport system permease protein II (probable substrates branched-chain/neutral amino acids) 2 [Marinobacter sp. ELB17] Length = 325 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 67/333 (20%), Positives = 124/333 (37%), Gaps = 36/333 (10%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 L LA + LL L + Y + L++ A +IV G G +S Sbjct: 9 RGYLFRLAAIAVCLLALAVVPAFVDPYSLRIVTGALMWAGLACAWNIVGGYAGYISFGHS 68 Query: 72 IAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + IGAY+ IL +L + S +++ I+G P+++ RG Y AIAT + Sbjct: 69 AFFGIGAYTTAILMQSGIGMPFLATLLPSVVVAMIVAAIIGGPTMRLRGAYFAIATWAFA 128 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 E+ + +T G AG+ + L F Y +L Sbjct: 129 EMLIQLATIL-DVTGGTAGLSLPAYLNEF---------------------FFYYTMLAAA 166 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + T + +RD++ A ++ K+ AFA+S+A + G+ FA Sbjct: 167 AASFLGVWYLIEYTRFGFRLKALRDHEPAAEAMGIRTNLVKVQAFALSAAITALFGSVFA 226 Query: 251 ASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I P ++ +V+LGG+ ++ A +L N Sbjct: 227 YWTTYIDPHSVLGPDITDQMVVMVLLGGLGTIWGPALGAVVLWM------------TNRY 274 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + ++ + + +V+L + L+ L Sbjct: 275 IWSTFGDTVVYLPILGLIIAMVVLFLPNGLISL 307 >gi|330470239|ref|YP_004407982.1| inner-membrane translocator [Verrucosispora maris AB-18-032] gi|328813210|gb|AEB47382.1| inner-membrane translocator [Verrucosispora maris AB-18-032] Length = 372 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 113/343 (32%), Gaps = 20/343 (5%) Query: 8 LNKYDKILCLLAVVYPLLLF-------LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 ++ L L+ + L+L + + L++ A G ++ Sbjct: 23 WSRLRPFLPLVVLAVALILPYSTLHLPGVFEGALNSPGTLQLLAVCLVFGGLAAGYDLLF 82 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G+LS + +A G Y IL +R GL +W P++ + ++G +L+ G Sbjct: 83 GRTGMLSFGHALYFAAGVYGTDILITRVGLPLWQAAPLAIVGGIILAGLVGAVALRTVGI 142 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 A+ TL +++ ++ + L + + V Sbjct: 143 AFAMVTLAFAQVGAILVAR------------DFGGLTGGEEGLPLDVTGVPSGLVGVANT 190 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + +Y++ L + ++ + + +RD+++ L KL AF ++ Sbjct: 191 VNLYWLALAYLVVVVFVVHRVSNSPTGRVLAGVRDDERRIGVLGLDPYRFKLVAFTLAGG 250 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G + SP + + ++ +V+LGG + + + + Sbjct: 251 LAAAGGVVYCLIVGGASPHITSSELTLSLLVMVVLGGPGTRWGPVLGGILYMYLDHRLIS 310 Query: 301 MNFYYFNSLLKFDCSFNMRH-TTLMVIALFLVILMRSHSLLRL 342 + L S + ++ L + L L Sbjct: 311 VGSSGAIDALPAFLSRPLSQPLFVLGTVFILAVYFFPGGLASL 353 >gi|302059925|ref|ZP_07251466.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] Length = 331 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 90/288 (31%), Gaps = 13/288 (4%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ + Sbjct: 43 SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102 Query: 87 -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 W +P + M L L L + + Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162 Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 AG+ + R + + F + ++ + + S I Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSITSQGTRATLFLATVVLLVASLYIG 222 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L ++ +RD + KL + +S+ G+AGA + I+P Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + +I V LGG +L ++ G+ Y+ Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSWFTVAFPEYW 330 >gi|254450035|ref|ZP_05063472.1| permease protein, haat family [Octadecabacter antarcticus 238] gi|198264441|gb|EDY88711.1| permease protein, haat family [Octadecabacter antarcticus 238] Length = 315 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 94/322 (29%), Gaps = 15/322 (4%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 G Y+ + IY + A G+++ G L + GAY + + Sbjct: 4 AFGFEFVNFYLIPGLVLGCIYALGAIGITLTFGILRFANFAHGEIMMSGAYLTWTVMAIA 63 Query: 89 GL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 G + + + ++ + K I ++ S I+ + Sbjct: 64 GYAGLTLHPLVAMVPATLLVILLFLGTDKFFYKPFRKADTIKVVMASFGMMLIIRSAVQV 123 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 G + + + L +I ++ G + ++ L R Sbjct: 124 IWGPNQLTFVRGIAKPNPVLSDLSGDIGMM---LIIPNKHLFIFAGTVIIVIALSYLLNR 180 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 T I A R + D+ + + + V AG F + M F Sbjct: 181 TRIGKAMRAVSDSPDLAHVTGIDVDKVIRATWIVGGICATAAGVFLVMDVQMLETTM-GF 239 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + + + ILGG+ ++ EL + + T + Sbjct: 240 RMLLPMFAAAILGGIGKPYGAVFGGLVIGLAEEL------SAYPWIGDTPLLSPGYKTGV 293 Query: 324 MVIALFLVILMRSHSLLRLRTP 345 + +++++R L + R+ Sbjct: 294 AFAIMVIMLIVRPQGLFKGRSF 315 >gi|258543391|ref|YP_003188824.1| urea short-chain amide or branched-chain amino acid transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256634469|dbj|BAI00445.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256637527|dbj|BAI03496.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256640579|dbj|BAI06541.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256643636|dbj|BAI09591.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256646691|dbj|BAI12639.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256649744|dbj|BAI15685.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256652732|dbj|BAI18666.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655788|dbj|BAI21715.1| urea short-chain amide or branched-chain amino acid transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 534 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 18/306 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ A GL+I G +G++++ IGAY+ ++ ++ L PVS ++ Sbjct: 246 LSYGSVLLLAATGLAITFGVMGVINMAHGELMMIGAYTTWMVQQGIRATVPWLEPVSLLV 305 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + L + + +L W + I + Sbjct: 306 AIPVAFCVCGLLGILIERGL--IRFLYGRPLETLLATWGLSLILQQAIRSIFGPTNIAVV 363 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + V + + + + +++L +R+T++ R + N++ Sbjct: 364 TPAWLSG-SWMIGSVDITLNRLAIFVFAFLVLGALMLVMRKTSLGLEMRAVTQNRRMAAL 422 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + AF + + G+AG A S+ S I +V+ GG+ +L Sbjct: 423 MGIRTPRVDALAFGLGAGLAGLAGV--AVSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLW 480 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L ++ +++ + L I + + Sbjct: 481 GTLAAAMTLGMGGKILEPTIGAVSAK-------------IAILVLVILYIQRHPRGMFPV 527 Query: 343 RTPSNF 348 R Sbjct: 528 RGRGVE 533 >gi|134101413|ref|YP_001107074.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|291008408|ref|ZP_06566381.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133914036|emb|CAM04149.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 292 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 85/309 (27%), Gaps = 27/309 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ + IY + A GL++V G + +++ Y IGAY + GLS + Sbjct: 6 QYLGNGLTLGAIYALMAVGLTLVFGYMNVVNFAHGEFYMIGAYLSYTVADVLGLSFISGL 65 Query: 97 PVSAMISGACGMIMGL-PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + + G+ + K R ++ + +L + Sbjct: 66 LAAVLGAIVLGLAIDSGVLRKLREHEDIALPILATIGISILLQNGAMLVWSPVPQTAGSP 125 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 ++++ + + L + RT I R Sbjct: 126 FS-----------SDSIDLLVARTTPRNIFIVVVVAVTILAAHLLMTRTRIGLDMRATFQ 174 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + + FA+ +A ++G A +VIL Sbjct: 175 DSTASWLMGVNVRRVYAMTFALGAALAALSGVLIATIFQI--TPTMGALATAKSFVVVIL 232 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S +L V L G + + Sbjct: 233 GGLGSFPGAIVGGLLLGLVESLGAGYLSAGYKDAFGLLVLLAVLLLL------------- 279 Query: 336 SHSLLRLRT 344 L R Sbjct: 280 PQGLFGARK 288 >gi|332670345|ref|YP_004453353.1| inner-membrane translocator [Cellulomonas fimi ATCC 484] gi|332339383|gb|AEE45966.1| inner-membrane translocator [Cellulomonas fimi ATCC 484] Length = 477 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 84/307 (27%), Gaps = 28/307 (9%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + + + + GLS++ G+ GL + ++G + GL + ++ Sbjct: 195 NGLVFGTLLALASVGLSLIYGTTGLSNFAHGEQVSLGGILAYVGTQVVGLPLLPSAVIAV 254 Query: 101 MISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ G + + R I +I++ + G + + Sbjct: 255 VLGALSGWLQDAGLWRPLRRRGVGMIQQMIVTIGLSMAVSYVFQFFFGAGPLRIV----- 309 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + + L + +L RT A R + DN Sbjct: 310 -------TETPTSVAIGPVRLTVTTLWSLAIAVVALVGVAYFLLRTRAGRATRAVADNPA 362 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + ++ + + + + G S +++ + V LGG+ Sbjct: 363 LSAASGISVNRTIRLVWTIGAGLAALGGVLVGLYFGATSWYAGGALL-LLMFAAVTLGGL 421 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + ++ VVEL + R Sbjct: 422 GAAFGALAGSIVIGLVVELSSLWIPTDMRYASALVILILVLLV-------------RPQG 468 Query: 339 LLRLRTP 345 +L T Sbjct: 469 ILGRATR 475 >gi|269793005|ref|YP_003317909.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100640|gb|ACZ19627.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] Length = 289 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 101/307 (32%), Gaps = 25/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + GL++V G L +L + YA+GAY + +++ S+ + + + Sbjct: 8 LLNGLAIGAIYGLTTLGLALVYGILRILHVAHAGVYAVGAYV-GLFAAQWTGSLLMGVLL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +S G+ + Y LI S L + + G Sbjct: 67 AGAVSSLLGVAIERLFYFPLLKYPPYVPLIGSIAVFISLEELIRLVAGPEIRS------- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + I V + V L + S+ RT A R + + Sbjct: 120 ----FPAEIPLPALKLGVVTVSPPLLAVYLTTGLVLLSLWFVTTRTEFGLAMRAASQDME 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 SL F + S +AG +++ ++++++GGM Sbjct: 176 VASSLGVNSHRVVSLTFVIGSFTAALAGVLVGVYYNQV-YPSMGAVPAYKTLALIVVGGM 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A+ +L L G + + L IA+ LV+L+R Sbjct: 235 GSVPGAVMASLLLGVAETLLIGYA------------NVPLPRDALAFIAMILVLLVRPKG 282 Query: 339 LLRLRTP 345 L R Sbjct: 283 LFARRPR 289 >gi|213967980|ref|ZP_03396126.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301383705|ref|ZP_07232123.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302131592|ref|ZP_07257582.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927323|gb|EEB60872.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 529 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAMIGMV 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|222529378|ref|YP_002573260.1| inner-membrane translocator [Caldicellulosiruptor bescii DSM 6725] gi|222456225|gb|ACM60487.1| inner-membrane translocator [Caldicellulosiruptor bescii DSM 6725] Length = 294 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 93/289 (32%), Gaps = 10/289 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + + G ++V G + L++ + +GAY + + L + + V Sbjct: 8 LINGITLGSIYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAYLSVTYLKLGLIPSLIV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + GM++ + K + I+ LI + +L I G + Sbjct: 68 SMIFCSILGMLIEKFAYKPLRNSPRISALITAIGVSLLLENLMQIIMGADSRVFPRLVAE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ Y+L+ L + +++T I A R + + Sbjct: 128 KNYH---------LFQGRIVVNNKQIYLLIITVLLMIILNFVVKKTKIGKAMRAVSQDMD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG + I+P M + + GG+ Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + L + L G + + + F + + Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYSSSMYKDAVAFALLILILIIKPSGLL 286 >gi|209884620|ref|YP_002288477.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Oligotropha carboxidovorans OM5] gi|209872816|gb|ACI92612.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Oligotropha carboxidovorans OM5] Length = 304 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 88/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + IY + A G ++V G +G+++ + IG + +I +P+ Sbjct: 8 LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLVLVSLGMTAVPL 67 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ M + I + + + + R+ Sbjct: 68 VLLLVVLIAMAITALYGWTVERIAYRPLRQSFRLAPMLSAIGMSFVLSNFSQVAQGARVK 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + V F V V+L L A + RT + R +Q Sbjct: 128 PVPPIVTGGYTLFESNGFVVRLSNIQIIVVLTTVVLLAIFSWVVTRTRLGRDMRACEQDQ 187 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 L + F + +A +AG + + M F I + +LGG Sbjct: 188 TMASLLGVDVDRTISMTFVIGAALAAVAGMMYLLYYGVVDFFM-GFVAGIKAFTAAVLGG 246 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + SL + + L + + F L +V++ Sbjct: 247 IGSLPGAMLGGLAIGLIETLWSAYFSSEYKDVAAFS-------------ILIVVLIFMPT 293 Query: 338 SLLRL 342 LL Sbjct: 294 GLLGR 298 >gi|330873927|gb|EGH08076.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 469 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 77/288 (26%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G G++++ +GAYS ++ I +I+ + Sbjct: 196 ITFGLPGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 255 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 256 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 313 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 314 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 373 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 374 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 431 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 432 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 466 >gi|319780322|ref|YP_004139798.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166210|gb|ADV09748.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 320 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 125/323 (38%), Gaps = 24/323 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ ++ LF+ + +Y + +I++ +FA G +++ G +GLLSL + +A G Sbjct: 11 ALHLGVVGLLFVLSFLLPEYYHGLLARIMVLAVFAMGYNMLFGYVGLLSLGHAMFFAAGL 70 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y + + G S+ +++GL +L+ G I T++ +++F +++ Sbjct: 71 YGAGLAVIQLGWSVPAAFAAGLACGVVVSLVIGLLALRTTGVAFMIVTMMFAQVFYLLIL 130 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + T G G+ V L S + Y L + + + Sbjct: 131 YFATWTGGDQGMVVPQPARVLSF---------GATSLELTNPTVRYMTALALFSIVLLVT 181 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + R+ IR+N++ L KL+A +S +GA +A + Sbjct: 182 LAIVRSRYGRVLVAIRENEERTKMLGYDTFSNKLAAVVISGIICAASGAAYALLFGYVGS 241 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +I+ + V+LGG + T + V+++ G Sbjct: 242 SFASVQYSILPLLWVLLGGAATTLGPLIGTLFMYYVIDITSGY---------------TS 286 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + ++ IAL L++L +L Sbjct: 287 AYLLIVGIALILLVLFFPKGILG 309 >gi|107024510|ref|YP_622837.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|116688111|ref|YP_833734.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|170731460|ref|YP_001763407.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|254246681|ref|ZP_04940002.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|105894699|gb|ABF77864.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia AU 1054] gi|116646200|gb|ABK06841.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia HI2424] gi|124871457|gb|EAY63173.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|169814702|gb|ACA89285.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 325 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 113/284 (39%), Gaps = 15/284 (5%) Query: 60 VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 +G GLLS + A Y+ G + L + + + G+++GL +++ +G Sbjct: 44 IGYTGLLSFGHAMFLATAGYATGYSMQTLGFTPELGVLAGTVAATVLGLVVGLFAIRRQG 103 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 Y A+ TL +++ I ++ ++ + R F + Sbjct: 104 IYFAMITLAFAQMVYFIYLQA--------------PFTHGEDGLQGVPRGRLFGLLDLSN 149 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 ++ +YYV+L + + + I+ + + I++N+ SL KL AF +S+ Sbjct: 150 DVALYYVVLAVVVAACAFIVRVVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFILSA 209 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 G+AG+ + ++ + +V+ + ++GGM +L A+++ + + Sbjct: 210 GLAGLAGSLKVLVLGFETLSDAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLG 269 Query: 300 GMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + S T + + +L ++ Sbjct: 270 DIGEWLASTTGVAWFHSLGESATIVTGLIFIACVLAFRRGIVGE 313 >gi|332528413|ref|ZP_08404405.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332042092|gb|EGI78426.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 411 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 90/329 (27%), Gaps = 36/329 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84 + ++ + L Y A GL ++ G G+LSL + + +G Y+ + Sbjct: 32 DIFRLNLVGKYLSYGFVALGLVMLWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPVST 91 Query: 85 -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + L L + + + Sbjct: 92 KIQSTPGIPDFMDWNQLTALPLWWEPFKHLPFALIAVVLIPTLLAFVIGYAMFKRRVGGV 151 Query: 144 TNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 I + L + + +YY+ + Sbjct: 152 YFAIITQAVALILTVLIVGQQGYTGGINGMTDLKTLMGWDIRTDGAKYLLYYLCAFLLLG 211 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + LW++++ + +RD + + K+ F +++A G+ GA F Sbjct: 212 TILLCLWIQKSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFVFCLAAALSGIGGALFTLQV 271 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG SL T ++ F Sbjct: 272 GFMSPSFVGIVPSIEMVIYAAVGGRMSLVGAVYGTLLVNFGKTY--------------FS 317 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F LM V + L L Sbjct: 318 ETFPDLWLFLMAALFIGVTMAFPEGLAGL 346 >gi|11498989|ref|NP_070222.1| branched-chain amino acid ABC transporter, permease protein (braE-4) [Archaeoglobus fulgidus DSM 4304] gi|2649180|gb|AAB89853.1| branched-chain amino acid ABC transporter, permease protein (braE-4) [Archaeoglobus fulgidus DSM 4304] Length = 449 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 117/340 (34%), Gaps = 51/340 (15%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80 I ++ + +Y + + L+I G G+ + +A +GA++ Sbjct: 111 ILNLALWFGLYTIVSLSLNIEYGFAGIPNFGRALAVLMGAFTVGGLVNRLLMLAFNIQGG 170 Query: 81 ----------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 + I L + ++ +I G + LPS K DYLAI Sbjct: 171 ELKEATGRLASTVNEIIANNPAFGIGLILLSVVLAMIIGAVTGALFILPSAKLSEDYLAI 230 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 L +SE+ + I G G+ V D L FL RS Sbjct: 231 TLLAISEVAFMVFYYHTGIIGGYYGVSVPDVLAFLPGQYRSHA---------------FA 275 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + L L + L + R +R+N+ ++ +++ ++ A+ S+ + Sbjct: 276 VIALLFALLVYIFVERLLNSPYGRLLRAMRENESVVEAMGKSVMTLRIKTAAIGSSIAAI 335 Query: 245 AGAFFAASRDRISPDMFKFSEN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 AGA F+ + F E +V+LGG + + T + V L Sbjct: 336 AGALFSLYSVNVIATSFSRVEWTFYPFLMVLLGGAGNNRGVVVGTFTFVLVKILLTMY-K 394 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 Y S L L + ++ V+L R L++ + Sbjct: 395 YEIKSALMLPFEAVWLEYILFGLLMYFVLLYRPEGLIKEK 434 >gi|224367401|ref|YP_002601564.1| LivH1 [Desulfobacterium autotrophicum HRM2] gi|223690117|gb|ACN13400.1| LivH1 [Desulfobacterium autotrophicum HRM2] Length = 302 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 95/306 (31%), Gaps = 17/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A G ++V G + L++ Y IGA++ +I+ S ++ + V Sbjct: 10 FLGGLTRGSIYALIALGYTMVYGIIQLINFAHGEIYMIGAFTGLIVSSVLTMAGMPTLGV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 M + A + + LI ++ + + Sbjct: 70 VIMAAMAAVIYSSAYGYTMEKIAYKPLRNA---PRLSALISAIGMSLFLQNYVLLAQTSD 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F + + +L + + + ++ T I A R ++ Sbjct: 127 FLPFPSLIPDFDFWEPYAHLISSPELVILATTFVVMMLLTVLIKFTRIGKAMRATSQDKI 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F V SA + G A+ +I+ M F I +LGG+ Sbjct: 187 MAALLGINVDRIISVTFVVGSATAAIGGLLIASHIGQINFYM-GFIAGIKAFVAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + +L G + + F I L ++++ R Sbjct: 246 GSIPGAVLGSFVLGWTESFFTGYISSDYEDVFAF-------------IILVVILIFRPSG 292 Query: 339 LLRLRT 344 +L Sbjct: 293 ILGKSE 298 >gi|206558423|ref|YP_002229183.1| putative branched-chain amino acid ABC transporter permease [Burkholderia cenocepacia J2315] gi|198034460|emb|CAR50325.1| putative branched-chain amino acid ABC transporter permease [Burkholderia cenocepacia J2315] Length = 325 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 114/284 (40%), Gaps = 15/284 (5%) Query: 60 VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 +G GLLS + A Y+ G + L + V + + G+++GL +++ +G Sbjct: 44 IGYTGLLSFGHAMFLATAGYATGYSMQTLGFTPELGVLVGTVAATLLGLVVGLFAIRRQG 103 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 Y A+ TL +++ I ++ ++ + R F + Sbjct: 104 IYFAMITLAFAQMVYFIYLQA--------------PFTHGEDGLQGVPRGRLFGLLDLSN 149 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 ++ +YYV+L + + + I+ + + I++N+ SL KL AF +S+ Sbjct: 150 DVALYYVVLVVVVAACAFIVRVVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFILSA 209 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 G+AG+ + ++ + +V+ + ++GGM +L A+++ + + Sbjct: 210 GLAGLAGSLKVLVLGFETLSDAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLG 269 Query: 300 GMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + S T + + +L ++ Sbjct: 270 DIGEWLASTTGVAWFHSLGESATIVTGLIFIACVLAFRRGIVGE 313 >gi|28872001|ref|NP_794620.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28855254|gb|AAO58315.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331014670|gb|EGH94726.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 529 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAMIGMV 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|300721694|ref|YP_003710970.1| high-affinity branched-chain amino acid ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297628187|emb|CBJ88742.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 308 Score = 80.3 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y I +Y I+ + + + + Sbjct: 12 MLNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMMGIDVGWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +I+ + I I + R Sbjct: 72 LISAAFIASIIIASTYGWSIERAAYRPIRNSKRLIALISAIGMSIFLQNYVSLSQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L V + + ++ L++R + + A R ++ Sbjct: 132 ALPGLVTGQWSLGESNGFSASISAMQITIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMAGLLGINTDRVISMTFVIGAVMAAIAGGLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + ++ F L V+L+ Sbjct: 251 IGSIPGAVLGGLILGVSEALTSAYLSTEYKDVVSF-------------ALLIGVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|227820403|ref|YP_002824374.1| urea or short-chain amide ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339402|gb|ACP23621.1| probable urea or short-chain amide ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 387 Score = 80.3 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 107/369 (28%), Gaps = 39/369 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLG------ATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 L++ I + + +L+ Y+ S+ + L Y + A L +V G Sbjct: 10 LDRTIVIAVAILLALAVLVPALNLLTAPDHPLHVPTYLVSLFGKYLTYALLALALDLVWG 69 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G+LSL +A+G Y+ + R + LP + D Sbjct: 70 FCGILSLGHAAFFALGGYAIGMYLMRQIGARGSYGNPLLPDFMVFLNWKELPWFWYGFDM 129 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162 A L++ + I + + D + Sbjct: 130 FWFAALMVVLVPGLIAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNG 189 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + F ++ +S I + R+ +RD + Sbjct: 190 LTDFKDILGFNIQADATRAALFAASALALAVSLVITSGIVRSKFGKVLVALRDAESRTRF 249 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L + KL AF VS+ G+AGA + I+P F+ +I V+ +GG +L Sbjct: 250 LGYRVEHMKLFAFTVSAMMAGVAGALYVPQVGIINPGEFEPGNSIEVVIWTAVGGRGTLI 309 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ G + F +F + LV L ++ Sbjct: 310 GPIIGAILVNGGKSI--------------FTAAFPEFWLFALGGLFVLVTLFLPKGVVGT 355 Query: 343 RTPSNFLER 351 R Sbjct: 356 AQHYLSRRR 364 >gi|167567694|ref|ZP_02360610.1| inner-membrane translocator [Burkholderia oklahomensis EO147] Length = 391 Score = 80.3 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 92/339 (27%), Gaps = 36/339 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------ 84 + ++ + L Y A GL I G G+LSL + + +G Y+ + Sbjct: 52 FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 111 Query: 85 ------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + A + L + Sbjct: 112 DPAATRTQTTPGIPDFMDWNQLTALPAWWKPFHDLPFSILAVLVVPTALAFVIGYAMFKR 171 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188 + + VA L L + + ++ +Y+V Sbjct: 172 RVGGVYFAIITQAVALILSVLIVGQQGYTGGVNGITDLRTLLGWDIRTDHAKLILYFVNA 231 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + +++R+ + +RD + + K+ AF +++ + GA Sbjct: 232 ALLIGALLACRYVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAVGGAM 291 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 F +SP +I ++ +GG SL ++ Sbjct: 292 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 340 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F SF LM V+++ + L L Sbjct: 341 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGLYEEHV 376 >gi|196036756|ref|ZP_03104147.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus W] gi|196047045|ref|ZP_03114264.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|228945580|ref|ZP_04107930.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195990639|gb|EDX54616.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus W] gi|196022149|gb|EDX60837.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|228814098|gb|EEM60369.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 317 Score = 80.3 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 60/331 (18%), Positives = 131/331 (39%), Gaps = 31/331 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F YYV L + ++ Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + + Y+ S L + R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T ++ + +V+L+ L+ ++R Sbjct: 274 TIILGLLYIIVLLVFPKGLVGTVKSLKNMKR 304 >gi|316935919|ref|YP_004110901.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315603633|gb|ADU46168.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 355 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 110/338 (32%), Gaps = 14/338 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L ++ +++ ++ +I I+ +++G G +S + Y Sbjct: 13 VLSLLLIAIVVVLALTPFVFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFY 72 Query: 75 AIGAYSYVILGSRYGLSIWL---LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IG+Y+ I G S I + ++ + +GL SL+ + A+ TL ++ Sbjct: 73 GIGSYAVAIALYGMGPSWPAVGTGIAIGLPLAALLALGIGLFSLRVEAIFFAMITLAVAS 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F + + +T G+ G + + F + YY++L C Sbjct: 133 AFLVLASQLSWLTGGEDGRSFSLP----ELLRPGTVFIKDFFGVRITGRTLTYYIILIGC 188 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 +L + + + +R+N+ +L +F A +++ AG A Sbjct: 189 AGMILALLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVIAALVAAAAGVLNAM 248 Query: 252 SRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 FS + ++ +V++GGM ++ I I + + Sbjct: 249 WLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASEATA 308 Query: 311 KFDCSFNMR------HTTLMVIALFLVILMRSHSLLRL 342 + + + ++ Sbjct: 309 AVGLPLLPNLLHPDRWLLWLGLLFVASVYFFPTGIVGR 346 >gi|91780544|ref|YP_555751.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693204|gb|ABE36401.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 314 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 62/328 (18%), Positives = 126/328 (38%), Gaps = 30/328 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L VV L+ + + + +L++ + A G +V G GLLS G Sbjct: 8 LIVVAVGLIAIGFQYLRGDGGAAFLVGLMLVWAIAALGYDLVFGLSGLLSFGHAAFLGSG 67 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL +++ L + + +SA++ ++ G +L+ G Y + TL ++++ +L Sbjct: 68 AYAVAILTTQWMLPFPVALFISAVLGALLALVFGAAALRASGIYCGLLTLALAQLTNILL 127 Query: 138 -IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ + +T G GI R F+ ++ + + + + Sbjct: 128 TVRLQGLTGGDDGISGVSRPIKY--------------LQFLTDDLNYVVYVGCIFLGALA 173 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + LR + R N+ L + +L+ FAVS A+ G+AG A Sbjct: 174 LSALLRLSPFGQVLRAASQNEVRAEQLGWNVRRYRLAIFAVSGAYTGIAGGLIAGLTQFA 233 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P + ++S + +I + +LGG SL + I + E+ ++ Sbjct: 234 GPQLMQWSNSGDLIIMTLLGGRDSLLGPVVGVVLTILLREVVGSYTEHWAG--------- 284 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ + L L ++ L Sbjct: 285 ------ILGVVFVLCTLYMPVGVIGLWR 306 >gi|330892811|gb|EGH25472.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 300 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 92/297 (30%), Gaps = 13/297 (4%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L + + Y ++ +IL Y + A L +V G GLLSL + +A+G Y+ Sbjct: 3 LLSLLPADNSFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMG 62 Query: 83 ILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 + W +P + + L L L Sbjct: 63 MYLMRQAAGDGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSR 122 Query: 133 FQNILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + AG+ + R + + F S ++ + Sbjct: 123 IKGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVL 182 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + S I L ++ +RD + KL + +S+ G+AGA + Sbjct: 183 LLIASLYIGWRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALY 242 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 I+P + +I V LGG +L ++ G+ Y+ Sbjct: 243 VPQVGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSWFTVAFPEYW 299 >gi|303246135|ref|ZP_07332416.1| urea ABC transporter, permease protein UrtC [Desulfovibrio fructosovorans JJ] gi|302492531|gb|EFL52402.1| urea ABC transporter, permease protein UrtC [Desulfovibrio fructosovorans JJ] Length = 378 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 103/355 (29%), Gaps = 37/355 (10%) Query: 11 YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + L A+V+ + L L A Y+ + + L + + A L +V G G+ Sbjct: 14 WTVTFVLAALVFVVAPVLNLAVPEGAALHLPNYMVQLLGKFLCFAILALALDLVWGYTGI 73 Query: 66 LSLNCVIAYAIGAYSYVILGSRYG---------------LSIWLLIPVSAMISGACGMIM 110 LSL + +A+G Y+ + R W +P + + Sbjct: 74 LSLGHALFFALGGYAMGMYLMRAMAGEGVYRSKLPDFMVFLDWKELPWFWLGFDHFWFAL 133 Query: 111 GLPSLKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + + +I + + + + Sbjct: 134 LVILIVPALLAFVFGFFAFRSRIKGVYFSIITQALTYAAMLLFFRNNTGFGGNNGLTDFK 193 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 R F + + ++ + L + + + + +RD + L Sbjct: 194 RLLGFSLAEPATKTGLFLCSGLVLLLFYLLCRAVTASKLGRVLTAVRDAESRVMFLGYDP 253 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + KL + +S+ +AGA + I+P + +I + V LGG +L+ Sbjct: 254 LRYKLFVWTLSAFMCAVAGALYVPQVGIINPSEMAPANSIEIAIWVALGGRGTLAGPLLG 313 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + G + F ++ L L LL L Sbjct: 314 AFAVNGAKSI--------------FTAVAPDLWLFVLSAIFILATLFLPRGLLGL 354 >gi|299066356|emb|CBJ37540.1| putative high-affinity branched-chain amino acid transport system permease (livM or livH) [Ralstonia solanacearum CMR15] Length = 396 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 95/345 (27%), Gaps = 32/345 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 V L+ Y ++ +I+ Y + A L +V G G+LSL + +A Sbjct: 32 VCAGVPVCALVVPAGHPLHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGLFFA 91 Query: 76 IGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 +G Y+ + +++ L Sbjct: 92 LGGYAMGMYLMRAIGRDGVYQSDLPDFMVFLDWKALPWFWHGTEHFAWAALLVVLVPGVL 151 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + A + +I + + + R FP + V Sbjct: 152 AWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPIAAV 211 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 ++ L+ + + IRD + + + KL + Sbjct: 212 STRTVLFVATFIALVLAFIACRAIVTSKFGRVVTAIRDAEARVMFSGYSPLGYKLFVWTF 271 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+ G+AGA + I+P +I + V +GG +L+ ++ G + Sbjct: 272 SAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLAGPIIGAFLVNGAKTV 331 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ LV L + +L L Sbjct: 332 LTAW--------------VPEYWLFVLGAVFVLVTLFLPNGVLGL 362 >gi|294055681|ref|YP_003549339.1| urea ABC transporter, permease protein UrtC [Coraliomargarita akajimensis DSM 45221] gi|293615014|gb|ADE55169.1| urea ABC transporter, permease protein UrtC [Coraliomargarita akajimensis DSM 45221] Length = 369 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 107/355 (30%), Gaps = 37/355 (10%) Query: 10 KYDKILCLLAVVYPLLLFLFL-----GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 K I ++A++ +L L G + S+ + L Y + A L+I+ G G Sbjct: 8 KEAGIFAIVAILLMMLPMLNAWGPESGLLSVSSFQVSLWGKYLTYAVLAMSLNILWGYTG 67 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPS 114 LL L + +A+G Y+ + + + + + Sbjct: 68 LLCLCQSLFFALGGYAMGMYLMLMIGERGAYNSVLPDFMVFLGYQELPIHWKPFYSFWFA 127 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR--------SL 166 + LI + IK + + A L F Sbjct: 128 SGAVLWVPGLVALIFGFLAFRSRIKGVYFSILTQALTYACCLMFFRNDFTFGGNNGFTDF 187 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + +Y + + L+ I L + + IRD++ + Sbjct: 188 KDILGMDLNADSTTRGLYIASVLLLLLTYLITSGLLASKFGKVQQAIRDSENRVLFSGYS 247 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 KL F +S+ G AGA + I+P + ++++ V+ V +GG + Sbjct: 248 TTSFKLVIFVLSAMIAGAAGALYVPQVGGINPSAMEAAKSLEVVVWVAVGGRGTKWGPVI 307 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + +F +M V+L+ ++ Sbjct: 308 GAILVNLLKSYTT--------------QAFPDYWLIIMGGLFVFVVLVMPDGIVG 348 >gi|161621009|ref|YP_001594895.1| inner-membrane translocator [Brucella canis ATCC 23365] gi|161337820|gb|ABX64124.1| inner-membrane translocator [Brucella canis ATCC 23365] Length = 332 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 131/338 (38%), Gaps = 34/338 (10%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 25 LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80 Query: 75 AIGA-YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 GA Y +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 81 GGGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMF 140 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 ++ ++ + R F F + + MYY +L + L Sbjct: 141 FFFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVL 186 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 187 GVFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVF 246 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + + + VI + +LGG+ +L A ++ + +F Sbjct: 247 QFATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV-------- 298 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 299 -------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 329 >gi|17546471|ref|NP_519873.1| amino acid ABC transporter permease [Ralstonia solanacearum GMI1000] gi|17428769|emb|CAD15454.1| probable amino acid transport system permease lipoprotein transmembrane [Ralstonia solanacearum GMI1000] Length = 440 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 113/342 (33%), Gaps = 23/342 (6%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M L L ++ L L+ L L Q + ++ Q+ I ++FA ++++ Sbjct: 20 MRFKPLNLARW------LIWGTTALVMLVLPLIWPQGFAITLLSQMGIMIIFALSYNMLL 73 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G+LS + +GA+ V L +R G + L I ++ +L Sbjct: 74 GQAGMLSFGHAVYAGLGAFVAVHLLNRIGAAPALGIGGPLAVALLPVAGGLGGALFGVLF 133 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 + L + + + + + D G + Sbjct: 134 GYVTTRRAGTTFSMITLGIGEMVF--ASALMLPDFFGGEGGVSTNRSIGEPLLGISFGLA 191 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 +YY++ C +S +++ +T + +RDN + + + +S+ Sbjct: 192 RQVYYLIAVWCLISMALMYAWTQTPLGRLANAVRDNPERVAFVGYNPQRVRYLVVILSAF 251 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G+AGA + + ++ + + V+ +GGM + + + G Sbjct: 252 FAGIAGALSCINFEIVTAENVSAVRSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSG 311 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + L+++ + L Sbjct: 312 ITKAW---------------LLYLGLFFVLMVMYAPGGIASL 338 >gi|163735970|ref|ZP_02143397.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter litoralis Och 149] gi|161390787|gb|EDQ15129.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter litoralis Och 149] Length = 298 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 92/303 (30%), Gaps = 21/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + Y + A GL+IV +GL++ A+G Y+ V + + ++I Sbjct: 8 IINALSFGAEYALLALGLAIVFSVMGLVNFAHGEVIAVGGYTMVAFAALVTANPLIIIVG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + + + L+ + +L + Sbjct: 68 AVGAAALTSVALERVAFRPVRYADPTTGLLTAFGVSIVLQNLFLLFISP----------R 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + + + ++L+L+RT + A R + + Sbjct: 118 PIAVTSLYFLDVPVTLFGVQISSLQIFESITTVVVIIGLVLFLQRTTLGLAMRAASLDFE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 AF +S G+A F A R + P F F+ + ++GG Sbjct: 178 MVRLTGIRANRVFALAFLISGLLAGLACIFIMARRGSVDPH-FGFNPVLKAFVACVVGGF 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L + L+ + + + LV++ R Sbjct: 237 GSLPGAVLGGFLLGAIE----------VGMLVLLPQEYGGLKDAFVFGIIALVLVWRPDG 286 Query: 339 LLR 341 +L Sbjct: 287 ILS 289 >gi|260459956|ref|ZP_05808209.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259034167|gb|EEW35425.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 349 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 113/348 (32%), Gaps = 25/348 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVMFAWGL 56 R + + L A + L+F + I + +Y + A G Sbjct: 18 TRKQAWGLVGLLAAAIVAWLVFAVWPDWLNAILISKKAFVSAILNGITLAGLYFLVASGF 77 Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 +++ G + ++L Y +GAY + +R G + + A+++ ++ + Sbjct: 78 TLIFGLMRNVNLAHGSLYLLGAYIGYEVTNRTGYWLLGVAAGFAVLAIVGVVMQVFVFRR 137 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 GD L + + + G I + L T S F Sbjct: 138 LEGDDLRQTLVSIGISIVAADLMLAVWAGGTYQITTPEWLDGALTLPVITAVRSNGASVF 197 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 + Y ++ VL + + L L +T + R D++ + + FA Sbjct: 198 LTYPLYRVVVLAAAIVIGVGLWLMLHKTRVGMMIRAGVDDRAMLQASGVNVHAVFAIVFA 257 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 V + G AG ++ + ++ + +VI+GGM S++ A ++ + Sbjct: 258 VGAGLAGFAGVVGGSALSVAPGEDVRYLL--ASLVVVIVGGMGSITGAAIGALLIGLAEQ 315 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + F L + + + + +R ++ Sbjct: 316 IGLVY--------------FPTYGIVLTFVIMVVTLAVRPQGIMGKAR 349 >gi|167574780|ref|ZP_02367654.1| inner-membrane translocator [Burkholderia oklahomensis C6786] Length = 391 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 92/339 (27%), Gaps = 36/339 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------ 84 + ++ + L Y A GL I G G+LSL + + +G Y+ + Sbjct: 52 FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 111 Query: 85 ------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + A + L + Sbjct: 112 DPAATRTQTTPGIPDFMDWNQLTALPAWWKPFHDLPFSILAVLVVPTALAFVIGYAMFKR 171 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188 + + VA L L + + ++ +Y+V Sbjct: 172 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLILYFVNA 231 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + +++R+ + +RD + + K+ AF +++ + GA Sbjct: 232 ALLIGALLACRYVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAVGGAM 291 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 F +SP +I ++ +GG SL ++ Sbjct: 292 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 340 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F SF LM V+++ + L L Sbjct: 341 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGLYEEHV 376 >gi|328951561|ref|YP_004368896.1| ABC-type transporter, integral membrane subunit [Marinithermus hydrothermalis DSM 14884] gi|328451885|gb|AEB12786.1| ABC-type transporter, integral membrane subunit [Marinithermus hydrothermalis DSM 14884] Length = 271 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 113/287 (39%), Gaps = 37/287 (12%) Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 +++ G G ++L + +GAY+ L + G+ + S + +G G+ +G SL+ Sbjct: 21 NLITGVAGQVTLGHAAFFGVGAYTLAYLTTEAGVGFGPALAASVLAAGVVGLALGAVSLR 80 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 R D+LAIAT+ ++ + + G GI R Sbjct: 81 LREDFLAIATIGVNFVAVAAFLYLPYF-GGAFGISDIPRP-------------------- 119 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 + + ++L +A + +R + + A +R+++ A +L + K++AFA Sbjct: 120 -AGPLGFFGLVLLAFAFTAWLHERVRASDLGLALLALRESEAAAAALGVDVRRFKVTAFA 178 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 + A G+AG +A+ I P+ F F ++ ++++V +GGM +L +L G + Sbjct: 179 LGCALAGLAGGLYASYIRVIHPEDFGFPLSVTLLAMVAVGGMGTLWGPIAGAVLLGGFAQ 238 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + Y + R LL R Sbjct: 239 AFAFVQNYQLFLYGLLLALT---------------MRYRPQGLLGRR 270 >gi|110678816|ref|YP_681823.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter denitrificans OCh 114] gi|109454932|gb|ABG31137.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter denitrificans OCh 114] Length = 298 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 91/303 (30%), Gaps = 21/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + Y + A GL+IV +GL++ A+G Y+ V + + +++ Sbjct: 8 IINALSFGAEYALLALGLAIVFSVMGLVNFAHGEVIAVGGYTMVAFAALVTANPLIIVVG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + + + L+ + +L + Sbjct: 68 AVAAAALTSVALERVAFRPVRYADPTTGLLTAFGVSIVLQNLFLLFISP----------R 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + + + ++L+L+RT + A R + + Sbjct: 118 PIAVTSLYFLDVPVTLFGVQISSLQIFESITTVVVIVGLVLFLQRTTLGLAMRAASLDFE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 AF +S G+A F A R + P F F+ + ++GG Sbjct: 178 MVRLTGIRANRVFALAFLISGLLAGLACIFIMARRGSVDPH-FGFNPVLKAFVACVVGGF 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L V + + + + LV++ R Sbjct: 237 GSLPGAVLGGFLLGAVEVSMLVLLPQEYGG----------LKDAFVFGIIALVLVWRPDG 286 Query: 339 LLR 341 +L Sbjct: 287 ILS 289 >gi|312875930|ref|ZP_07735920.1| inner-membrane translocator [Caldicellulosiruptor lactoaceticus 6A] gi|311797411|gb|EFR13750.1| inner-membrane translocator [Caldicellulosiruptor lactoaceticus 6A] Length = 327 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 90/289 (31%), Gaps = 10/289 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + + G ++V G + L++ + +GAY + + L + + + Sbjct: 41 LINGITLGSVYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAYLSVTYLKLGLIPSLIL 100 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S GM++ + K + I+ LI + +L I G + Sbjct: 101 SMTFCSVLGMLIEKFAYKPLRNSPRISALITAIGVSLLLENLMQIIMGADSRVFPRLVDE 160 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +++ + ++L ++T I A R + + Sbjct: 161 KNYHLLQGRIVVNNKQIYLLIITILLMIILNFVV---------KKTKIGKAMRAVSQDMD 211 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG + I+P M + + GG+ Sbjct: 212 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 270 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + L + L G + + F + + Sbjct: 271 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 319 >gi|147676411|ref|YP_001210626.1| branched-chain amino acid ABC-type transport system, permease components [Pelotomaculum thermopropionicum SI] gi|146272508|dbj|BAF58257.1| branched-chain amino acid ABC-type transport system, permease components [Pelotomaculum thermopropionicum SI] Length = 294 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 99/303 (32%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ + +GA+ +++GL + L + Sbjct: 8 VINGLQLGFMYALIALGYTMVYGIIKLINFAHGDVFMVGAFIGYFGFAQWGLPLPLAVIT 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + GMI+ + + I+ LI + L + + Sbjct: 68 AMAACAVLGMIIEKIAYRPLRYAPTISILISALGVSLFLEYF---------CSLRFVFGP 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V+ + V V + + + + RT I A RT+ + Sbjct: 119 NYRVVQRPFEEVHWSLGGVTVTNIQVMVAAVVIVMLLMLQYLIYRTKIGMAMRTVSYDHD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G +A + +I P M + + +LGG+ Sbjct: 179 AARLMGVNVDSVISITFAIGSALAAAGGVLYAIAYPQIQPFM-GIMPGLKAFTAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + I+ V L + F L +V+++R Sbjct: 238 GIIPGAVLGALIMGQVETLTAAFLSSQLRDAIAF-------------AVLIIVLMVRPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|312864533|ref|ZP_07724764.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Streptococcus downei F0415] gi|311099660|gb|EFQ57873.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Streptococcus downei F0415] Length = 293 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 107/303 (35%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I IY + A G ++V G + L++ + +GA+ + L+ W+ + Sbjct: 9 LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIFMMGAFIGYWAINGLHLNFWIALIF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S +++ GM++ + + + I+ LI + +L G Sbjct: 69 SMVLTAILGMVIEFLAYRPLRNSTRISALITAIGVSFLLEYTMVFFFGSN---------- 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + I+ F V +L L + L +++T + A R + + Sbjct: 119 -KRSFPQAIKMHSFDLGPVTITNIQLLILAVAIVLMIGLQLIVKQTKMGKAMRAVSVDSD 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + I P M + I +LGG+ Sbjct: 178 AAQLMGINVDSTISFTFALGSALAGAAGVLIALYYNSIDPLM-GMTPGIKAFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + L + + ++ L +++L+R Sbjct: 237 GLIPGAAIGGFVIGILETLSNALG-------------LSTYRDAIVYAVLIVILLVRPAG 283 Query: 339 LLR 341 +L Sbjct: 284 ILG 286 >gi|307729749|ref|YP_003906973.1| inner-membrane translocator [Burkholderia sp. CCGE1003] gi|307584284|gb|ADN57682.1| inner-membrane translocator [Burkholderia sp. CCGE1003] Length = 360 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 92/303 (30%), Gaps = 2/303 (0%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ L L++ A GL+ + G G+LS + + Sbjct: 19 ALHAAPWLVALCLPLIVDANTSGNLAYCLLWAFSAVGLAAMWGYGGILSFGQTAFFGLSG 78 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNIL 137 YSY I YG + + ++ L + + ++ +L Sbjct: 79 YSYGIFTLNYGDIWFESWLGLGVGLMVSVVVAALIGYMIFYGGIKGVFIGIVTLSVTLVL 138 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY-EIFMYYVLLGMCFLSAS 196 + T G RL +P + YY++L + + Sbjct: 139 ETFMSQTAGPQWAIGEARLNGYNGMGGMAPLTIPWPGGPLTLENASFYYLVLALLIVVYV 198 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ L IR+N + L I +L F +S G++GA + I Sbjct: 199 VMRRLLDGTFGLTLIAIRENPQRAEMLGVDIRRHQLLVFVLSCTLGGLSGALYTIWGSYI 258 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P + + + V G ++ TA+L+ + + Y LL Sbjct: 259 TPSTMGLTAAAMPVIWVATSGRKTIGGTIFGTALLVWLSQNLAVYGSQYALILLGAILLI 318 Query: 317 NMR 319 + Sbjct: 319 VVL 321 >gi|170751878|ref|YP_001758138.1| urea ABC transporter, permease protein UrtC [Methylobacterium radiotolerans JCM 2831] gi|170658400|gb|ACB27455.1| urea ABC transporter, permease protein UrtC [Methylobacterium radiotolerans JCM 2831] Length = 390 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 109/362 (30%), Gaps = 36/362 (9%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N + K + L+++ + L + + ++ + L Y A GL I G G+LSL Sbjct: 17 NPFMKPVEWLSLLLLAGVILVVLPLVLDGFRLNLVGKYLTYAFVALGLVICWGYAGILSL 76 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL- 127 + + +G Y + SI S + +L + L Sbjct: 77 GQGVFFGLGGYCMAMYLKLEASSIENTKIQSTPGIPDFMDWNQITALPWFWQPFKSLPLT 136 Query: 128 ----IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT-----------------VRSL 166 + + +LI + G Y A + + L Sbjct: 137 LILAVAVPVLFAMLISFAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 196 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + ++ +Y+V G+ +++++ + +RD + + Sbjct: 197 RTLHGWDIRTDHAKVILYFVNGGLLIACILAAQYVKKSKLGRILVAMRDKEDRVRFSGYS 256 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + K+ AF ++ + GA F +SP +I ++ +GG SL Sbjct: 257 VAGFKVFAFCFAAGLAAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRLSLFGAVW 316 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 T ++ F SF + V+L + L + Sbjct: 317 GTLLVNWAKT--------------SFSESFPDLWLFGLGALFIAVVLAFPNGLAGIWREH 362 Query: 347 NF 348 Sbjct: 363 IE 364 >gi|167035888|ref|YP_001671119.1| urea ABC transporter permease UrtB [Pseudomonas putida GB-1] gi|166862376|gb|ABZ00784.1| urea ABC transporter, permease protein UrtB [Pseudomonas putida GB-1] Length = 495 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 222 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRYAPGAIEFYPLIALPVAFAVSAGVGMA 281 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W I + + + + + + Sbjct: 282 LER--TVIRHLYGRPLETLLATWGISLILIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 339 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + L L RT + R + N+ + + AF + Sbjct: 340 VLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 399 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L +L Sbjct: 400 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 457 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 458 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 492 >gi|116692728|ref|YP_838261.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|116650728|gb|ABK11368.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia HI2424] Length = 389 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 92/334 (27%), Gaps = 36/334 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI------- 83 + ++ + L Y A GL I G G+LSL + + +G Y+ + Sbjct: 50 FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 109 Query: 84 -----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + + L + Sbjct: 110 DPAATHTQTTPGIPDFMDWNQLTALPTWWKPFHSLPFSILAVLVVPTALAFVIGYAMFKR 169 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188 + + VA L L + + ++ +Y+V Sbjct: 170 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLVLYFVNA 229 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + + W++R+ + +RD + + K+ AF +++ + GA Sbjct: 230 TLLIGALLVGRWVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAIGGAM 289 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 F +SP +I ++ +GG SL ++ Sbjct: 290 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 338 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F SF LM V+++ + L L Sbjct: 339 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGL 369 >gi|107026088|ref|YP_623599.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|105895462|gb|ABF78626.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia AU 1054] Length = 389 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 92/334 (27%), Gaps = 36/334 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI------- 83 + ++ + L Y A GL I G G+LSL + + +G Y+ + Sbjct: 50 FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 109 Query: 84 -----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + + L + Sbjct: 110 DPAATHTQTTPGIPDFMDWNQLTALPTWWKPFHSLPFSILAVLVVPTVLAFVIGYAMFKR 169 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188 + + VA L L + + ++ +Y+V Sbjct: 170 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLVLYFVNA 229 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + + W++R+ + +RD + + K+ AF +++ + GA Sbjct: 230 TLLIGALLVGRWVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAIGGAM 289 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 F +SP +I ++ +GG SL ++ Sbjct: 290 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 338 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F SF LM V+++ + L L Sbjct: 339 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGL 369 >gi|158424494|ref|YP_001525786.1| ABC-type branched-chain amino acid transport permease component [Azorhizobium caulinodans ORS 571] gi|158331383|dbj|BAF88868.1| ABC-type branched-chain amino acid transport permease component [Azorhizobium caulinodans ORS 571] Length = 329 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 66/327 (20%), Positives = 132/327 (40%), Gaps = 28/327 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L +++ L A + Y+ + I LI A +++ G++S + + Sbjct: 14 LALGAGLVVVALLPLAAGASPYMLGLLISALILAGLALSWALLGNLGGMVSFGHAAFFGV 73 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G+Y+ +L +R G+ + L IP++ +I+ + LP+L+ G Y A+A L ++IF+ + Sbjct: 74 GSYASALLAARLGVPVLLAIPLAGLIATISSLA-MLPALRLSGPYFALAILAYAQIFRIL 132 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + +T G AG+ L L + Y ++L M + A Sbjct: 133 ATEATWLTGGAAGLQRYPGLPTLFGFNLAERHG-------------SYVLVLAMVVICAI 179 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 I + +RR+ + A R I +++ A + K +S+ GM GA A + Sbjct: 180 IYVAIRRSHVGIALRAIAESEDATRVVGVNSTLLKTWMLMLSAFIAGMFGALNAHIIGFL 239 Query: 257 SPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 PD F +++ I + GG ++ ++ ++ Sbjct: 240 EPDYAFSGIWSVMPIIAAVFGGYRTVLGPVLGAIVIYMFDQVVA-------------KSL 286 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + H L+ I L +++L+ + L L Sbjct: 287 IPVGHQILLGILLAIMVLVAPNGLAGL 313 >gi|284046345|ref|YP_003396685.1| inner-membrane translocator [Conexibacter woesei DSM 14684] gi|283950566|gb|ADB53310.1| inner-membrane translocator [Conexibacter woesei DSM 14684] Length = 342 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 109/336 (32%), Gaps = 24/336 (7%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + V L+L G + + + + + A GL++V G+L L++ Sbjct: 31 LGVTLAIVAVIVLVLIAAYGLHDVAQRGVNGLVSGSYFALGAVGLTLVYGTLRLVNFAHG 90 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 GAY + +G+ + + +++ A G++ + A ++ Sbjct: 91 ELLTFGAYMAFLANVTWGVPLIAATLFAIVLTAALGVLTERTMWRPMRARGAGLLQLLLM 150 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + Y ++ + + V++ Sbjct: 151 TLGLAFVL----------RYGIQMIWGTVPRRLDVDVTDSISFLGLRIGRTELIVVVVGI 200 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ L LR T++ R + D+ ++ + ++ G+AG + A Sbjct: 201 TTLVAVGLMLRLTSLGRQMRALADDMALAEVTGIDTDRVVVATWIFAAGLAGLAGVLYTA 260 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++P++ F + + VILGG+ + +L E + + + Sbjct: 261 AIGTLTPNLGFFLLLSLF-AAVILGGIGNAYGALAGGLLLGLAQEWSTLVIDARWKVAVG 319 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F L LV+++R L + + Sbjct: 320 FG-------------ILILVLIVRPQGLFGRKERTV 342 >gi|221068860|ref|ZP_03544965.1| inner-membrane translocator [Comamonas testosteroni KF-1] gi|220713883|gb|EED69251.1| inner-membrane translocator [Comamonas testosteroni KF-1] Length = 320 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 109/289 (37%), Gaps = 12/289 (4%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L L ++ QILI +FA L + +G G+L++ + +GAY+ Sbjct: 16 ALFWVLMASMYFVLPEHLTLMSQILIMGLFAVSLDMALGYAGILTVGHAAFFGMGAYAAG 75 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + + ++ M+ A G +M ++ + T+ + + + Sbjct: 76 LWAKHAWNEPFSGLLIAVMVCAALGYLMSYLVVRGADLTRLMITIGLCVLLGETANRLAG 135 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ + G F ++ + L + L+ ++ + Sbjct: 136 VTGGSDGLQGIELAPLFGV------------FDFDLWGKTSFIYSLAVVLLAFLVVRRIL 183 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R+ A R I D+ K ++ + + A+ S+A G+AGA A S + + Sbjct: 184 RSPFGLALRGIHDSSKRMQAIGSPVQSRLRMAYCFSAAIAGLAGALMAHSTQFVGIESLS 243 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + + V+ I++LGG L + + V E MN Y+ + Sbjct: 244 INRSAEVLIILVLGGTGHLYGGLIGAIVYMVVHEKFADMNPEYWMFWIG 292 >gi|27376080|ref|NP_767609.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27349219|dbj|BAC46234.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 380 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 101/355 (28%), Gaps = 36/355 (10%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N++ L+ ++ + + + + ++ + L Y A GL I G G+LSL Sbjct: 4 NRFFNRSELIGILVLAVFLVVVLPLSLDVFRLNLVAKYLTYAFVALGLVICWGYGGILSL 63 Query: 69 NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 + + +G Y + + + Sbjct: 64 GQGVFFGLGGYCMAMFLKLEASSVENTKIQSTPGIPDFMDWNQITALPFFWKPFNSLTFT 123 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167 L + + VA L L + Sbjct: 124 IAAIILVPGIFALIIGTAMFKRRVGGTYFAIITQAVAAILTILIVGQQGYTGGINGMTDL 183 Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + +I +Y+ +G+ F I ++R + + +R+ + + Sbjct: 184 RTLKGWDIRPDHAKIVLYFFEVGLLFACIMIAQFVRHSKLGRILVAMREKEDRVRFSGYS 243 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + K+ AF +++ F + GA FA + +SP +I ++ +GG S+ Sbjct: 244 VANFKIFAFCIAAVFAAIGGAMFALNVGFMSPSFVGIVPSIEMVIYTAVGGRLSILGAIY 303 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 T ++ +F + V+L + L Sbjct: 304 GTLLVNFAKTSLSE--------------TFPELWLFGLGGLFIAVVLAFPNGLAG 344 >gi|27378495|ref|NP_770024.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] gi|27351643|dbj|BAC48649.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 360 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 123/339 (36%), Gaps = 28/339 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A +L L + + ++ + LI + A L + G G++SL + A Sbjct: 31 AAWIVAVLLLIMPLIANGFFLIEIFATTLILGIMALSLMFLAGYGGMVSLMQLTIAGFAA 90 Query: 79 YSYVILGSRYG------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 Y + G WL +PV+ ++ G + G +++ G Y + TL + Sbjct: 91 YMVAVFGVSANTNISLGWPWWLAVPVALALATVFGTLGGALAVRTEGIYTIMITLAIGAA 150 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 F + I NG GI +F G R+ I YY++L + Sbjct: 151 FYYFTNQNWAIFNGHTGINTVATPHFWGVNWRAD--------------IPFYYIVLAVAA 196 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + ++ R A + +RDN + +L + +++A+A +S +AG + Sbjct: 197 LCYFAVDYISRAPFGLALQGVRDNPRRMAALGFNVNAHRVAAYAFASFVAALAGVLQVWN 256 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 +ISP I V+ I ++GG+T I + + + + +F Sbjct: 257 YRQISPGSVSVGACIDVLIIAVVGGITRPIGPFIGALIFVLLRTFALDVLIKFGLDGNRF 316 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L+ + ++ S ++ L R Sbjct: 317 R--------LLIGLGFLAIVFWSSDGVIGLWQRWRQSPR 347 >gi|322835573|ref|YP_004215599.1| inner-membrane translocator [Rahnella sp. Y9602] gi|321170774|gb|ADW76472.1| inner-membrane translocator [Rahnella sp. Y9602] Length = 295 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 122/311 (39%), Gaps = 19/311 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +++ + IY + A L++ G GLL+ ++ GAY+ + G+ +GL +W++ Sbjct: 2 SEFLLHILCLAGIYAIIALALNLQAGYAGLLNFGHIVFVGTGAYAVGL-GNNFGLPLWVV 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 IP + + +M L + DY IATL ++EI + ++ +T G GI Sbjct: 61 IPAGLLCAIVISALMALLGRQLTADYWGIATLALAEIIRIAVVNEDALTGGAQGI----- 115 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + V ++L ++ L + + A R +R+ Sbjct: 116 ---------GGLSSPWSTGDTVTDTRIFAIIILLSVIVATLASLRIGASRFGRALRLMRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + + K A S+ +AG A D +SPD SE ++ S+V++ Sbjct: 167 QPQLAICMGYALPWLKCRALMSSAVMCCLAGMLLAWYTDYVSPDYLLSSETFLIWSMVMI 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ + ++ G+ Y+ S +++ L L R Sbjct: 227 GGIGNVRGVLLGVLLVEGLYNFIPFAKDYFHISSDLTGALRLGLVGLALLLCL----LTR 282 Query: 336 SHSLLRLRTPS 346 LL + + Sbjct: 283 PGGLLPEKLRT 293 >gi|319654207|ref|ZP_08008296.1| hypothetical protein HMPREF1013_04916 [Bacillus sp. 2_A_57_CT2] gi|317394141|gb|EFV74890.1| hypothetical protein HMPREF1013_04916 [Bacillus sp. 2_A_57_CT2] Length = 291 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 111/305 (36%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G LG++++ + GA+ V++ S + +WL Sbjct: 6 LINGITLGSIYAIVALGFTLVFGVLGIINMAHGEIFMFGAFIGVVVTSTFKGPLWLAFMA 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ A G ++ +L+ + ++ L + I + +++ G Sbjct: 66 AILVTAAMGYLLERFALRPLRNKQGVSHLAPLISTIGVSILLENLSHHIFGPGNHP---- 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R+ F + + + + L ++ WL +T A R +N + Sbjct: 122 ----FRASFAEISFQIGSITVYLVQIVIFIISVLLMYALSFWLGKTKAGKALRATAENLE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + ++SA G+AG + + ++P M S + ++I+ILGGM Sbjct: 178 TASLLGVDVKRTITMTVIIASAMGGIAGILVGMAFNSVTPQM-GLSIGLKGLAIIILGGM 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ IL + + F + +L+R Sbjct: 237 GNVKGAMAGGLILGLAETFVVVYGNSGYKDAIAFAAIIVI-------------LLIRPQG 283 Query: 339 LLRLR 343 L + Sbjct: 284 LFGQK 288 >gi|307321316|ref|ZP_07600716.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|306893044|gb|EFN23830.1| inner-membrane translocator [Sinorhizobium meliloti AK83] Length = 333 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 112/325 (34%), Gaps = 27/325 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++L L ++ +I + L +V G G+ +L + GA Sbjct: 22 LAGLTVILVLAGIGYLFFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGA 81 Query: 79 YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ I + L++ + G+ G+ L+ G + ++ + +F Sbjct: 82 YAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEFA 141 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 K T G G+ +G +F ++ Y + + + + Sbjct: 142 NKASSWTGGSDGLAGIAPDPLIGL------------FAFDLWGRTAYVFGVVLLAIVFVL 189 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + R+ R IR++ ++ + A L + +S A G+ GA A S + Sbjct: 190 LRLVVRSPFGMLCRGIREDPIRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVG 249 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 D F+ + + +++LGG SL T + + +L N +++ Sbjct: 250 LDSLSFTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSAANPFHW----------- 298 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 T++ L V+L L Sbjct: 299 ---LTMVGALLIAVVLFAPKGLYGT 320 >gi|311742279|ref|ZP_07716088.1| inner-membrane translocator [Aeromicrobium marinum DSM 15272] gi|311313907|gb|EFQ83815.1| inner-membrane translocator [Aeromicrobium marinum DSM 15272] Length = 445 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 102/323 (31%), Gaps = 30/323 (9%) Query: 28 LFLGATKSQKYIDSMGIQI---LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 S ++I++M I LI + A GLS++ G+ L + + GA + + Sbjct: 146 AIEAVPFSDRFIEAMVSGIKFGLIVALAALGLSLIFGTTKLTNFSHGELITFGAIATYVA 205 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKP 142 GL + + S G + K IA +I+S F L Sbjct: 206 NRGLGLPVVFAGIAAVAASALFGYLQDKMLWKPLRNKGVGIIAMMIVSIGFGLFLRNVYQ 265 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 T G + ++ + R FV ++ ++ L Sbjct: 266 YTFGGS-----------RRSLSEYVSQGRDDYGFVSLAPKEIAIMGIALVTLVVVVTALM 314 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 T + A R + DN S + S + + +A G++G A + + Sbjct: 315 TTRLGKAMRAVSDNPALSASSGMRVDGVISSVWVLGTALTGLSGVLLAVNSQV--NFLMG 372 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F ++V + V LGG+ ++ + I+ +VE+ + + Sbjct: 373 FRLLLLVFAAVTLGGLGTIWGALVGSMIIGIMVEVGPLFGVPTSIKEVGALVVLILILLV 432 Query: 323 LMVIALFLVILMRSHSLLRLRTP 345 R +L R Sbjct: 433 ------------RPQGILGRRER 443 >gi|254788032|ref|YP_003075461.1| urea ABC transporter permease UrtC [Teredinibacter turnerae T7901] gi|237684011|gb|ACR11275.1| urea ABC transporter, permease protein UrtC [Teredinibacter turnerae T7901] Length = 388 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 104/349 (29%), Gaps = 33/349 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + L+ Y ++ + L Y + A L +V G G+LSL +A+G Y+ Sbjct: 33 FLNLVMPEGSLLHIPTYTVTLLGKYLCYALLALALDLVWGYCGILSLGHGAFFALGGYAM 92 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + R + LP D A +++ + + + Sbjct: 93 GMYLMRQIGDRGVYGNPELPDFMVFLNWDKLPWYWHSFDMFWFAMVMVVLVPGLLAFVFG 152 Query: 142 PITNGK-------------------AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 + ++ D + + F S + Sbjct: 153 WLAFRSRVTGVYLSIITQALTFALMQAFFLNDFGFGGNNGLTDFKEIVGFDVSSDGTRLT 212 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 ++++ + L+ ++ ++ +IRD + L + KL F S+A Sbjct: 213 LFFITAIILVLAYIACRFITQSKFGRVMLSIRDAESRTRFLGYRVEHYKLFVFVFSAALA 272 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AGA F I+P F +I ++ V LGG +L ++ G Sbjct: 273 GIAGALFVPQVGIINPGEFSPINSIEIVIWVALGGRGTLYGAVIGAVVVNYAKTYFTG-- 330 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +F ++ + L+ L + Sbjct: 331 ------------AFPEIWLFMLGGLFVIATTTLPRGLVGLAEDLMEKRK 367 >gi|56477370|ref|YP_158959.1| ABC transporter permease [Aromatoleum aromaticum EbN1] gi|56313413|emb|CAI08058.1| Possible ABC transporter, permease protein precursor [Aromatoleum aromaticum EbN1] Length = 309 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 117/321 (36%), Gaps = 29/321 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 ++ L LG + ++IL + +FA ++++G GLLS Y+ Sbjct: 6 IGWIILLVLGLVAPFLVYPVLVMKILCFSLFACAFNLLLGYTGLLSFGHAAFLGWAGYTC 65 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 GLS L + + A G + G +++ G Y A+ TL ++++ + +++ Sbjct: 66 GYAIKELGLSPELGLLAGTATAAALGFVFGSLAIRRSGIYFAMVTLALAQLMYFLALQF- 124 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 ++ + R + F + + MYY +L + +I Sbjct: 125 -------------PFTGGEDGLQGVPRGYLFGLVDLSQTMNMYYFVLAVFLGGFWLIDRA 171 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + IR+N+ SL + KL AF +S+A G+AGA S Sbjct: 172 IHSPFGQVLKAIRENEPRAISLGYDVDRYKLLAFVLSAALSGLAGATKTLVFQLASLTDV 231 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + + ++ + +LGGM ++ +++ + + + Sbjct: 232 HWHMSGEIVLMTLLGGMGTVFGPVVGATVVVSLQNYGAELGQWVS--------------- 276 Query: 322 TLMVIALFLVILMRSHSLLRL 342 L + + +L ++ Sbjct: 277 VLTGVIFVICVLAFRRGIVGE 297 >gi|288915943|ref|ZP_06410325.1| ABC transporter related protein [Frankia sp. EUN1f] gi|288352572|gb|EFC86767.1| ABC transporter related protein [Frankia sp. EUN1f] Length = 913 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 112/303 (36%), Gaps = 20/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 L++ +F + ++ G G L L +GA + L S G + Sbjct: 323 WVDALRVTLVWSIFLLSVVVLTGYAGQLCLAQFALGGVGALTTSWLISSKGWPLEAAAVT 382 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + A G++ LP+L+ RG LAI TL +S + ++ T G +G+ V+ R Sbjct: 383 GVAAATAAGLLFALPALRTRGIELAIVTLSLSAVLHAMVFNSAEFTGGVSGMDVSQR--- 439 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + V+L ++A ++ LRR+ + TIR ++ Sbjct: 440 ---------SLFGIGIDSFDHPRRFAIVVLVAFVVTALLVANLRRSKPGLSMITIRTRER 490 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A SL ++ KL+AFAV SA G+AG F +++ +++ ++GG+ Sbjct: 491 AAASLGVSVAVTKLTAFAVGSAIAGLAGVLLILGNPVALFSQFDPIGSLMTVTLAVIGGV 550 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + N + L L+++ + Sbjct: 551 GYIVGAPLGG--------QLSTGGVGTRLGDSFGLGNLNQWLVLFTGVFLILLLIQDPNG 602 Query: 339 LLR 341 + R Sbjct: 603 MAR 605 Score = 41.8 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 81/287 (28%), Gaps = 26/287 (9%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 + + G+ ++ G+L+L + A+ Y+ L S + A+ S + Sbjct: 18 LSLLSQGIVLIYRGSGVLNLAHGAIAMLAAHIYIALSDAGWASWQAAVITIALSSLMGAV 77 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 I + + ++ M + I T V+S + Sbjct: 78 IHNAVLRPMGEASILVKSIAMIAVLLITQAGVTLIFG------------TDATFVQSFLP 125 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 + + L L+ + R + I A +N +A +L + Sbjct: 126 QAVTRVGGISVPQDRIVLALIALLLTGLLYAVFRWSTIGLAISATAENSEAAAALGWSPH 185 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 A+A S G+AG + + +++ ++S A Sbjct: 186 VIGTVAWASGSGLAGLAGILVGPFTGVDPQTLTLIVIGGLAGALIGG--LSSFPLAALGG 243 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 + + T+ ++ + +++ R Sbjct: 244 FGIGIAQAVIPSYVE------------LQGAAQTVPLVIIIGLLVWR 278 >gi|55378710|ref|YP_136560.1| branched-chain amino acid ABC transporter permease [Haloarcula marismortui ATCC 43049] gi|55231435|gb|AAV46854.1| branched-chain amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 373 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 114/292 (39%), Gaps = 24/292 (8%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 ++ +I L ++ + + A + ++ +FA G I G G +S Sbjct: 59 RFGEITGLQLLLLLVAFGGLVTAPLWGQDYLRPLTLGAVWAVFAMGWDIQSGYTGYISFG 118 Query: 70 CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 Y+ +L +++ +P+S + + G+ + +PSL+ RG Y ++ T Sbjct: 119 HSALSGAAGYTTGLLVLHLNPELSLFVTVPLSILATTVLGLAIAVPSLRLRGPYFSLVTF 178 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + +F + TNG GI F YY++ Sbjct: 179 VTVLLFYRLTKALSHWTNGLRGIR---------------------VDVFTYDLTLQYYMV 217 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + A+ + ++ R+ + IR+N+ A + KL +F +S+ +G+ G Sbjct: 218 VVPMLAVAATLTYVGRSDVGTVLVAIRENEDAVSAAGVDPTKFKLWSFVLSAVPMGIGGV 277 Query: 248 FFAASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 A + P F +I +I++ ++GGM+S+ + +G+ ++ Sbjct: 278 LLAHVNAGVDPQTFVIVDNSIQMIAMAVIGGMSSILGPLGGAFLFVGLRDVF 329 >gi|76801385|ref|YP_326393.1| branched-chain/neutral amino acids ABC transporter permease [Natronomonas pharaonis DSM 2160] gi|76557250|emb|CAI48825.1| ABC-type transport system permease protein II (probable substrates branched-chain/neutral amino acids) 3 [Natronomonas pharaonis DSM 2160] Length = 347 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 114/318 (35%), Gaps = 25/318 (7%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + I+ +FA I G G +S + AYS +L + Sbjct: 39 PALTAVGLMSGTLLRTLALANIFAIFAMAWDIQSGYTGYISFGHAVLSGAAAYSAALLIT 98 Query: 87 R--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 ++ WLL PV+ +++ G+I+ +++ G Y ++ TL+ +F + T Sbjct: 99 HVVPDINPWLLFPVAVLMALVVGLILAATTIRLSGPYFSLITLVAGLLFYRSTRTFSQWT 158 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G+ G+ + + + + + L A+ +L + R+ Sbjct: 159 QGEQGLLIGRLPVLPPFD----------GIFSAFDAEWRFIITVVPMLLIAAALLVISRS 208 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + IR+N+ A S K+ +F +SS +G+ G A ++P Sbjct: 209 NVGTVLVAIRENEAAVESAGIDTNKFKVWSFVLSSIPMGIGGFLLAFFDGSVNPTDIVLL 268 Query: 265 EN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + + I++ ++GGM S+ + +G+ + Sbjct: 269 DRSVEFIAMAVIGGMGSILGPLAGAFLFVGL------------RDAILPAFLGGTERWLA 316 Query: 324 MVIALFLVILMRSHSLLR 341 + + + +VI++ L R Sbjct: 317 LWVIILVVIVLARDGLFR 334 >gi|329113959|ref|ZP_08242726.1| High-affinity branched-chain amino acid transport system permease protein LivH [Acetobacter pomorum DM001] gi|326696706|gb|EGE48380.1| High-affinity branched-chain amino acid transport system permease protein LivH [Acetobacter pomorum DM001] Length = 549 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 18/306 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ A GL+I G +G++++ IGAY+ ++ ++ L PVS ++ Sbjct: 261 LSYGSVLLLAATGLAITFGVMGVINMAHGELMMIGAYTTWLVQQGIRATVPWLEPVSLLV 320 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + L + + +L W + I + Sbjct: 321 AIPVAFCVCGLLGILIERGL--IRFLYGRPLETLLATWGLSLILQQAIRSIFGPTNIAVI 378 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + V + + + + +++L +R+T++ R + N++ Sbjct: 379 TPAWLSG-SWMLGSVDITLNRLAIFVFAFLVLGALMLVMRKTSLGLEMRAVTQNRRMAAL 437 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + AF + + G+AG A S+ S I +V+ GG+ +L Sbjct: 438 MGIRTPRVDALAFGLGAGLAGLAGV--AVSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLW 495 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L ++ +++ + L I + + Sbjct: 496 GTLAAAMTLGMGGKILEPTIGAVSAK-------------IAILVLVILYIQRHPRGMFPV 542 Query: 343 RTPSNF 348 R Sbjct: 543 RGRGVE 548 >gi|328545423|ref|YP_004305532.1| ABC transporter permease [polymorphum gilvum SL003B-26A1] gi|326415165|gb|ADZ72228.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1] Length = 317 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 114/286 (39%), Gaps = 18/286 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L+ + ++LI +FA L++++ ++S + +GAY Sbjct: 14 LLVLALIGAEAANRFGGAGLSLALSEMLILALFASSLNLLMTYGHMVSFGHAAYFGLGAY 73 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + +R G+ + + + +++ G++ G ++ Y A+ TL ++I +L + Sbjct: 74 GFTLAVTRAGVPVEAALVLGPLVATLGGIVFGALCVRLTEIYFAMLTLACAQITYTVLFQ 133 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W T G GI F + E ++L + + +I+ Sbjct: 134 WYGFTGGDTGITGFMPAR------------------FGLSEANFTSLVLAVLVVGLAILA 175 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + + + R++ ++ +L +L+ FA+S+ F G+AG +A + PD Sbjct: 176 RIINSPLGLSIRSVGQDRWRAEALGLAPRRVQLTVFAISAFFAGVAGTLYAVFQGAAFPD 235 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 + + +V++GG+ S + + + ++ Sbjct: 236 YAGLGFTLDALIMVVIGGLRSFWGGVVGAIVFSQLRHWAPLVTNHW 281 >gi|257870223|ref|ZP_05649876.1| branched-chain amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257804387|gb|EEV33209.1| branched-chain amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 292 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 103/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y IG++ L +++ L + + + Sbjct: 8 LINGLFLGSIYALLALGYTMVYGIIKLINFAHGEVYMIGSFIGYFLINQWNLGFFPALFI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + S A G+ + + + + I+ LI + +L Sbjct: 68 SMIASAALGVTIEFLAYRPLRNSTRISALITAIGVSYLLQNVMIFFFSPD---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + FV +L L + L +++T + A R + + Sbjct: 118 -VRPFPQAIARKTYSIGFVEVSNIQLLILAVSLALMILLQLIVKKTRMGKAMRAVSVDAD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G + I P M + +LGG+ Sbjct: 177 AARLMGINVNRTISFTFALGSALAAAGGMLIGLYYNSIDPTM-GVVPGLKSFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + + F+ L+ + L +++L+R Sbjct: 236 GIIPGAALGGFVIGLIETVATALG-------------FSDYKDALVYVILIIILLVRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|257867466|ref|ZP_05647119.1| branched-chain amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257873795|ref|ZP_05653448.1| branched-chain amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257877545|ref|ZP_05657198.1| branched-chain amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257801522|gb|EEV30452.1| branched-chain amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257807959|gb|EEV36781.1| branched-chain amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257811711|gb|EEV40531.1| branched-chain amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 292 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 99/303 (32%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y IG++ L +++ L + + + Sbjct: 8 LINGLFLGSIYALLALGYTMVYGIIKLINFAHGEVYMIGSFIGYFLINQWQLGFFPALFI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + S A G+ + + + + I+ LI + L Sbjct: 68 SMIASAALGVTIEFLAYRPLRNSTRISALITAIGVSYFLQNVMIFFFSAN---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + FV +L L + L +++T + A R + + Sbjct: 118 -VRPFPQAIERQTYSIGFVQVSNVQLLILAVSVTLMILLQLIVKKTRMGKAMRAVSVDAD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G + I + +LGG+ Sbjct: 177 AARLMGINVNRTISFTFALGSALAAAGGMLIGLYYNSID-PSMGVVPGLKSFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ V + F+ L+ + L +++L+R Sbjct: 236 GIIPGAALGGFVIGLVETAATALG-------------FSDYKDALVYVILIIILLVRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|110667577|ref|YP_657388.1| ABC-type branched-chain amino acid transport system, permease protein I [Haloquadratum walsbyi DSM 16790] gi|109625324|emb|CAJ51746.1| ABC-type branched-chain amino acid transport system, permease protein I [Haloquadratum walsbyi DSM 16790] Length = 333 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 103/325 (31%), Gaps = 24/325 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----------------Y 81 + + Q IYV+ A GLSI++G+L ++ Y IG Y+ + Sbjct: 11 LLNGLQQGAIYVLLAVGLSIILGTLKFVNFAHGALYVIGTYAGLLIALDVSLTSGKLREW 70 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 L + + ++ G+ M + D ++++ ++ + Sbjct: 71 GFSTIGLDLGFFAALVFVPIVVFIIGVTMERFLAQSFYDRPDTDQILVTFGIAIVVQELF 130 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI--YEIFMYYVLLGMCFLSASIIL 199 + G + L I + +I + + +V+ L + Sbjct: 131 RVLFGSNSLPFNQPENVLAIGGFGGIPVSGPITLPIIGGFPRWRLWVIAITAVLVGIVYA 190 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + T R + + L I L F + +A G+AG + Sbjct: 191 LVEYTDFGLIVRAGTRDAEMVRLLGVKIDRPYLVVFGIGAALAGVAGVVGGPL--SVVNP 248 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + V++GG+ S++ ++ V G+ F +F+ Sbjct: 249 TVGTNILVPAFLTVVIGGIGSITGAVAGGLLIGLVQATLIGLPSVTLG---AFTLNFSPW 305 Query: 320 HTTLMVIALFLVILMRSHSLLRLRT 344 + LV+L+R +L Sbjct: 306 SQVGLYAIAALVLLLRPQGILGSEE 330 >gi|91781257|ref|YP_556464.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693917|gb|ABE37114.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 327 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 100/299 (33%), Gaps = 11/299 (3%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y+ ++LI + A +V G G+LS + + G Y +L YG++ Sbjct: 22 PFVLSDYLTVFATKVLILSLLALSFDLVWGYAGILSFGQALFFGGGGYVAAVLARDYGVN 81 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 ++ +A+++GA + + I + + + G Sbjct: 82 AAIVALPAAILAGALLSAVVAGVVVLGKSATQIFIALGTMTASYAAYRLAISWYYLGGQN 141 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 L L T RF YY+ L + + ++ +L R+ + A Sbjct: 142 GISSLPLLKTGSYEFDEGPRF-----------YYLALALLIVIYAVSRFLVRSQLGLALT 190 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IR+N + L + K + F S A G+AG A I P + + Sbjct: 191 GIRENVRRMVFLGYRVNVFKAAVFVFSGAIAGLAGGLTAFHEGFIGPGSLGTVLSTQAVL 250 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +LGG +L I+ + + LL + + +I+L + Sbjct: 251 YSLLGGSGTLIGAVFGAVIIETLGFGLSDRLPELWPVLLGIILLLLIIYRPQGLISLIV 309 >gi|220904339|ref|YP_002479651.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868638|gb|ACL48973.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 297 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 91/303 (30%), Gaps = 22/303 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + +Y + A G ++V G L L++ +GAY +G + VS Sbjct: 12 NALTLGSLYALIAIGYTMVYGILRLINFAHGDILMVGAYFVFFGTFAFGWPWGVAAVVSV 71 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + G+ + + + D I+ LI + + + Sbjct: 72 AGASLLGVFIERVAYRPLRDAPRISALISAIAVSFFIESLAVVVF----------TGQPR 121 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 ++ + + +V L L ++ + RT A R I + + Sbjct: 122 PVLQPEWLVAEWQIGSLRILPLTAFVPLMTIVLVGFLLYVVYRTKPGLAMRAISKDIETT 181 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 L + F + SA +G +A ++ P M + + GG+ S Sbjct: 182 RLLGVRVDNIIALTFCIGSALAAASGIMWALRYPQVHPYM-GIMPGLKAFIAAVFGGIGS 240 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + L V + + F + + L LV+ + LL Sbjct: 241 IQGAVIGGVALGFVEIMT-----------VAFMPELSGYRDAFAFVLLVLVLFYKPTGLL 289 Query: 341 RLR 343 R Sbjct: 290 GER 292 >gi|207723555|ref|YP_002253954.1| amino acid transport system permease lipoprotein [Ralstonia solanacearum MolK2] gi|206588756|emb|CAQ35719.1| amino acid transport system permease lipoprotein [Ralstonia solanacearum MolK2] Length = 440 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 109/333 (32%), Gaps = 17/333 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + L L+ + L + + ++ Q+ I ++FA ++++G G+LS Sbjct: 23 RPFNLARWLIWGSTALVMIVLPLIWPRGFAITLLSQMGIMIIFALSYNMLLGQSGMLSFG 82 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + +GA+ V L +R G L I ++ +L Sbjct: 83 HAVYAGLGAFMAVHLLNRIGAVQALGIGGPLAVALLPLAGGLGGALFGVLFGYVTTRRAG 142 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + L + + + + D G + +YY++ Sbjct: 143 TTFSMITLGIGEMVF--ASALMFPDFFGGEGGVSTNRSIGEPLLGISFGPARQVYYLIAA 200 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 C +S +++ +T + +RDN + + + + +S+ F G+AGA Sbjct: 201 WCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYSTQRVRCLVVILSAFFAGIAGALS 260 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + + ++ + + V+ +GGM + + + G+ + Sbjct: 261 CINFEIVTAENVSAVRSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSGITKAW---- 316 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L+++ + L Sbjct: 317 -----------LLYLGLFFVLMVMYAPGGIASL 338 >gi|291279323|ref|YP_003496158.1| branched-chain amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754025|dbj|BAI80402.1| branched-chain amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 281 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 102/267 (38%), Gaps = 22/267 (8%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y S+ I + I V+ + L+++ G G +SL Y GAY+ ++ +I Sbjct: 3 YFYSLLILVGISVILSLSLNLISGYCGQISLGHAAFYGTGAYAAAMIAQLGINIPISIIF 62 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + F ++ +K + G+ + Sbjct: 63 GAIVAGVF----------------------GFIVGFSSLRVKDDFLAITTMGVNFLFIGF 100 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + ++ V+ + + ++ + A+ I D++ Sbjct: 101 VRQQEWLGGEMGIYSIPATGLTKMQYSLVVTIVAIFVIMFSITIKNRWMGFAFEAIADDE 160 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A ++ KL+AF + + G+AG +A I PD F F+E+I ++S+V++GG Sbjct: 161 DAAETVAINTSKYKLTAFILGTMLAGLAGGLYAFDIRYIGPDSFGFTESISILSMVVVGG 220 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFY 304 + S+ + A+ IL + + ++ Y Sbjct: 221 IGSVWGVVTASIILSLLPQWLQFISDY 247 >gi|260223446|emb|CBA34021.1| hypothetical protein Csp_B21950 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 367 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 101/347 (29%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I+ V L+ A + ++ +I+ Y + A + ++ G G+LSL + Sbjct: 26 IVLCALVPVLNLMVPAGSALHLSDFAVALTAKIMCYSICALAMGLIWGYTGILSLGHGLF 85 Query: 74 YAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 +A+G Y+ + W +P +SG+ G + L Sbjct: 86 FALGGYAMGMYLMRQIGLDGNYKSNLPDFMVFLDWKELPWHWALSGSFGATLFLVVAVPG 145 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 + + A + + R F R + Sbjct: 146 LVAFVFGYFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFKRILDIPIA 205 Query: 179 YEIFMYYVLL---GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + L + WL + + +RD + + + KL+ + Sbjct: 206 TTSMRMTLFVMTSVTLLLFFLLARWLVGSKFGRVLQAVRDAESRVMFSGYSTLGYKLTIW 265 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+ G+AGA + I+P + +I + +GG +L ++ G Sbjct: 266 TISAMMCGVAGALYVPQVGIINPSEMSPANSIEIAIWAAVGGRATLIGPIVGAFLVNGAK 325 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + V L ++ L Sbjct: 326 SWLT--------------VTYPEFWLYFLGALFIGVTLFLPDGVVGL 358 >gi|254441473|ref|ZP_05054966.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] gi|198251551|gb|EDY75866.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] Length = 410 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 106/367 (28%), Gaps = 37/367 (10%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + L + + + S ++ ++G + L + A + +V G G+LSL Sbjct: 14 WFLAGLAIFTLGVTFMSEAAGVDIISTSFLKTLG-KTLCLCLVAIAMDVVWGYCGILSLG 72 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGL 112 + IG Y+ + + S + Sbjct: 73 HFAFFGIGGYAIGMWLMYARTEGIVATSLESAALPPTPQEITDAIGSQIFGVVGSSEFPA 132 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 L + ++ ++ W + G+Y++ + + Sbjct: 133 IWAFSHSLPLQLLAVVFVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYFFQNDT 192 Query: 173 PS------------------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 S + ++ ++ + + ++ + R IR Sbjct: 193 GLRGNNGLSGLQNVPGLEARSQAVVSLWFFWASAVALGMGYVLFAYIVSGKFGSVIRAIR 252 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 DN+ L + KL F ++ G+AGA + I+P +I + V Sbjct: 253 DNEARVRFLGYHVEQYKLFIFTCTAMVAGIAGALYYPQAGIINPAEIAPIASIYLAVWVA 312 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG L A++ + G + N + + L+ ++ LV L Sbjct: 313 IGGRGRLYGAVIGAALVSLMSSWFTGGSAPNINLGF-YVIKWTDWWLVLLGVSFVLVTLY 371 Query: 335 RSHSLLR 341 + Sbjct: 372 FPKGIGG 378 >gi|160895709|ref|YP_001561291.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160361293|gb|ABX32906.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 287 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 83/305 (27%), Gaps = 27/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A GL++V G L + + Y IGA+ + W + Sbjct: 8 VLNGLTLGGIYGLVALGLTLVYGILHVPNFAHGGFYMIGAFVAFQAMVAWSWGYWAAMLT 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A+ G++ + I S L G + Sbjct: 68 AAVAVAVLGIVSERLIFHPLRKASPLHPKIASIGLLLFLEAGAQALWGADFQRMPTPYTS 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ L ++ L+L RT + N++ Sbjct: 128 IVEM------------GGITAPAQRLLIIGAAFALMVALHLFLTRTITGATIIAMAQNRE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+S +A +A + I+ILGGM Sbjct: 176 GASMVGIDANRVSMLTFAISGVLAAVAATLYAP--INLVYPAMGHLVITKAFVIIILGGM 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + L +++ +R Sbjct: 234 GSIPGAVLGGLIIGFAESFGAYYIS-------------TDYKDIIAFVLLVVILSLRPQG 280 Query: 339 LLRLR 343 L R Sbjct: 281 LFAKR 285 >gi|170686393|ref|ZP_02877614.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|227815244|ref|YP_002815253.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229601747|ref|YP_002866339.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|170669469|gb|EDT20211.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|227005640|gb|ACP15383.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229266155|gb|ACQ47792.1| branched-chain amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] Length = 317 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 129/322 (40%), Gaps = 31/322 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F +YYV L + ++ Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TLYYVTLICLLIIFVLLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + + Y+ S L + R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T ++ + +V+L+ L+ Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295 >gi|146339850|ref|YP_001204898.1| high-affinity branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146192656|emb|CAL76661.1| high-affinity branched-chain amino acid ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 305 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 85/306 (27%), Gaps = 16/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + IY + A G ++V G +G+++ + IG + +I +PV Sbjct: 8 LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDVFMIGGFIALISFLVLVSIGLTAVPV 67 Query: 99 SAMISGACGMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +I M + R Y + + + +TN A Sbjct: 68 ILLIVLLVSMAITALYGWTIERIAYRPLRHSFRLAPMLSAIGMSFVLTNFSQVSQGARVK 127 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 V V++ L + RT + R + Sbjct: 128 PVPPIITGGYTLHEGDSGFVVQLSNIQIVVVVTTIVLLGLFTWLVSRTRLGRDMRACEQD 187 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 Q L + F + +A +AG + + M F I + +LG Sbjct: 188 QTMAALLGVDVDRTISMTFVIGAALAAVAGMMYLLYYGLVDFFM-GFVAGIKAFTAAVLG 246 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL + + + + F L +V++ Sbjct: 247 GIGSLPGAMLGGLAIGLIETFWSAYFSVEYKDVAAFS-------------ILIVVLIFLP 293 Query: 337 HSLLRL 342 LL Sbjct: 294 TGLLGR 299 >gi|187477448|ref|YP_785472.1| ABC transporter permease [Bordetella avium 197N] gi|115422034|emb|CAJ48557.1| ABC transporter, permease protein [Bordetella avium 197N] Length = 290 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 92/315 (29%), Gaps = 26/315 (8%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 L + + +Y + A GL+++ G L +++ A + Y+ +L R Sbjct: 1 VLDPAILFSSVLNGLTTGAVYALIALGLTLIYGVLHIINFAQGAALMVALYAVYLLKERL 60 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + + +P+ G + + L+++ ++ + Sbjct: 61 NIDPYAALPLVVAGMFVLGYALQRYVINRASHGKDENILLVTLGLAIVMENLALVWFKSD 120 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 T+ + + + G ++A + +R T + Sbjct: 121 -----------TRTIETAYTLSTVEIGPAMIALPKIIAFCGALAVAAVLFWIIRSTDLGR 169 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A R + ++ + + +F + A +G A F + ++ Sbjct: 170 AIRAVSKEKQGAKLMGIDVEKVYALSFGIGMACLGAAACFLLPAYYV--NPQVGSGFVLV 227 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 +IV+LGGM S ++ V + + + Sbjct: 228 AFTIVVLGGMGSFVGALVGGLLIGVVESIGGLFLGDSLGQMG-------------IFAIF 274 Query: 329 FLVILMRSHSLLRLR 343 V+L R L R Sbjct: 275 IAVLLFRPQGLFGAR 289 >gi|182439315|ref|YP_001827034.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779967|ref|ZP_08239232.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|178467831|dbj|BAG22351.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660300|gb|EGE45146.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 309 Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 91/305 (29%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ + IG + + + L+ + Sbjct: 8 LANGLILGAMYGLIAIGYTMVYGIIQLINFAHGEIFMIGGFGALTVYLGLPSGFSLIAAI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 MI G + + R Y + LI ++ Sbjct: 68 PLMIVGGVIAAVAISMAAERFAYRPLRG----GPRLAPLITAIGLSLALQQAVWMWYPDA 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + +VL+ ++ ++ +T + + Sbjct: 124 TKDRSFPQFEGEAFDVLGATIQRGDIFVLVVAPLCMLALGFFVSKTRAGRGMQATSQDPD 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + AFA+ +AF +A + +I M F + + +LGG+ Sbjct: 184 TAKLMGINTDRIIVMAFAIGAAFAAVAAVAYGLKNGQIGFRM-GFIMGLKAFTAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L L G L L +V+L+R Sbjct: 243 GNIYGAMLGGIVLGVAEALATGYMSEVPGMEL---FGGGAWKDVWAFALLIIVLLVRPQG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|146340379|ref|YP_001205427.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146193185|emb|CAL77197.1| putative branched-chain amino acid ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 351 Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 127/316 (40%), Gaps = 16/316 (5%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 + S +D++ L + A GL+++ G G +SL A+GAY+ L R Sbjct: 34 VVPWIGSDYLMDAVLTPFLALALAAVGLNVLTGYAGQVSLGSAAFLAVGAYAAYNLNLRL 93 Query: 89 GLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 + L I ++ I+ A G++ GLPSL+ RG YLA++TL Q L K+ +N Sbjct: 94 PVLPLLADIVLAGGIAAAMGIVFGLPSLRLRGFYLAVSTLAAQFFVQWALTKFGWFSNDN 153 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 A + R Y L + ++ ++ L + Sbjct: 154 ASGVIDAP-------------VIRVGGLTFTSATGRYVFSLTIVVVATALTARLLASQTG 200 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSEN 266 + +RD++ A + ++ KL AF VSS IG+AG +A A + P F + Sbjct: 201 RNFIAVRDHEVAAKVIGVPLLRTKLLAFGVSSFLIGVAGVLWAFAYLRTVEPAGFNLDRS 260 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 ++ I+I+GG+ SL A ++ L + S+ M ++ Sbjct: 261 FQILFIIIIGGLASLRGAFIGAAFIVVFPLLLSRLGAAVLGSVFDRGV-LEMSQRIVIGA 319 Query: 327 ALFLVILMRSHSLLRL 342 + ++ L+ L Sbjct: 320 LIIAFLIAEPRGLVAL 335 >gi|187920438|ref|YP_001889470.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] gi|187718876|gb|ACD20099.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 356 Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 91/307 (29%), Gaps = 2/307 (0%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L L++ A GL+ + G G+LS + + Y+Y I Sbjct: 22 LVALCLPLVVDANTSGNLAYCLLWAFSALGLAAMWGYGGILSFGQTAFFGLSGYTYGIFT 81 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILIKWKPIT 144 YG + + + GL + + ++ +L + T Sbjct: 82 LNYGDTWFESWLGLGAGIVVSIVAAGLIGYMVFYGRIKGVFIGIVTLSVTLVLETFMSQT 141 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY-EIFMYYVLLGMCFLSASIILWLRR 203 G RL +P + + YY++L + +I+ L Sbjct: 142 AGPQWAIGEARLNGYNGMGGMPQLTIPWPGGPLTLENVSFYYLVLLLLIAVYAIMRKLLD 201 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 IR+N + L I +L F + G++GA + I+P Sbjct: 202 GTFGLTLIAIRENPQRAEMLGVDIRRHQLMVFVLGCTLGGLSGALYTIWGSYITPSTMGL 261 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + + + V G S+ TA L+ + + Y LL + Sbjct: 262 TAAAMPVIWVATSGRKSIGGTIIGTAFLVWLSQNLAVYGSQYALILLGAILLIVVLAAPE 321 Query: 324 MVIALFL 330 ++ Sbjct: 322 GLLPFVA 328 >gi|319763585|ref|YP_004127522.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330824149|ref|YP_004387452.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317118146|gb|ADV00635.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329309521|gb|AEB83936.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 287 Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 27/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A GL++V G L + + Y +GA+ + +G W+ + Sbjct: 8 VLNGLTLGGIYGLVALGLTLVYGILHVPNFAHGAFYMVGAFVAFHAMNAWGWGYWVAMLA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A + A ++ I +I + L G + Sbjct: 68 AAAVVAALAVVSERLVFHPLRKASGIHPMIAAIGVLLFLEAGAQALWGADFQRMPTPYTS 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ L ++ L+L RT + + N++ Sbjct: 128 IVEM------------GGITAPAQRLLIIAAAFALMVALHLFLTRTTTGSTIIAMAQNRE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+S +A +A + I+ILGGM Sbjct: 176 GASLVGIDANRVSMLTFAISGMLAAVAATLYAP--INLVYPAMGNLVITKAFVIIILGGM 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + L +++ +R Sbjct: 234 GSVPGAIVGGLIIGFAESFGAFYIS-------------TDYKDIVAFVLLVVILSLRPQG 280 Query: 339 LLRLR 343 L R Sbjct: 281 LFAKR 285 >gi|126731077|ref|ZP_01746885.1| ABC transporter ATP-binding protein [Sagittula stellata E-37] gi|126708379|gb|EBA07437.1| ABC transporter ATP-binding protein [Sagittula stellata E-37] Length = 336 Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 107/351 (30%), Gaps = 25/351 (7%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVM 51 M F R + I+ L A + L+F I +Y + Sbjct: 1 MQRFIQRHPVWSFIIALGAAILLWLIFAPWSTGMEDALGKKRIFLNGIFGGITLGALYFL 60 Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A G +++ G + ++L Y +G Y + R G V ++ ++ Sbjct: 61 VASGFTLIFGLMRNVNLAHGSLYLLGGYLGFEVSERTGSWFLAFPVVFVVVGIVGIVLQN 120 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 + G+ L + + + IY D L+ T Sbjct: 121 QVFRRMEGEELRQTMVTIGLSVVIADLLLWQWGGQSYTIYAPDILFGPMTLPVVSDVRDS 180 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 ++ Y +L + + L L +T + R D+++ + I + Sbjct: 181 GEVVYLKYPAVRMAILFAAIVIGVGMWLVLNKTRLGMLVRAGVDDREMLAASGVRIQYVF 240 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L+ FA + GMAG + + +F + +VI+GGM S+ A I+ Sbjct: 241 LAVFAFGAGLAGMAGIVGGTFQSLSPGEDTRFLL--ASLVVVIVGGMGSIPGAAIGALII 298 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +L + + +V+ R LL Sbjct: 299 GLSEQLGLIYA--------------PTYSVVFTFLIMAVVLAFRPQGLLGR 335 >gi|297568091|ref|YP_003689435.1| inner-membrane translocator [Desulfurivibrio alkaliphilus AHT2] gi|296924006|gb|ADH84816.1| inner-membrane translocator [Desulfurivibrio alkaliphilus AHT2] Length = 368 Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 121/360 (33%), Gaps = 57/360 (15%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 +L + ++ ++L L ++ + Y + GL +++G G +SL Sbjct: 4 LLPISLLLATVVLIQQLTLWTDTQFYLTQLTMTGYYSLLIIGLCLLLGYAGQISLGHAGF 63 Query: 74 YAIGAYSYVILGSR-------------------------------YGLSIWLLIPVSAMI 102 +AIG Y+ +L +R W ++ Sbjct: 64 FAIGGYTSAVLTTRDFSLHLDHPLLVVSDRLGLLMSRADYFGGEIIHFHPWAAAALALAA 123 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++G+P LK +G YLA+ATL I + + V G + Sbjct: 124 TMIIAYLIGVPVLKLKGHYLAMATLGFGIIIYRVALASPIFGEADGIFEVPAFPLLAGLS 183 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + YY+ + ++ ++L L + + R I +++A + Sbjct: 184 ISGDF----------GSRVSNYYIAWVLVAITMFLLLNLINSRVGRGLRAIHGSEEAANA 233 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + KL F +S+ +AG F I P +++ ++IV +GGM +L Sbjct: 234 MGINTASYKLRTFILSAVLAALAGVFMTHYSSGIGPSEAGVMQSVRYVAIVAVGGMANLW 293 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L + + F + + L ++L LLRL Sbjct: 294 GALTMGVGL----------------NFMSLRGMFGTYDEAVFGLILITIMLFAPQGLLRL 337 >gi|119386726|ref|YP_917781.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119377321|gb|ABL72085.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Paracoccus denitrificans PD1222] Length = 411 Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 96/352 (27%), Gaps = 36/352 (10%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ G+ + + L + A + +V G LG+LSL + +A+G Y Sbjct: 29 LMSTAYGSGALPTSTVKVLGKTLCLALAAVAMDLVWGYLGILSLGQMAFFALGGYMIGQW 88 Query: 85 GSRYGLSIWLL-------------------------------IPVSAMISGACGMIMGLP 113 + +P+ ++ + + L Sbjct: 89 LMYARTEAIVAASLSGNPIPPTVQELREAVANQIFGVVGSADLPLVWTLAHSLTAQLVLV 148 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L L + + A + L P Sbjct: 149 VAVPGLLALVFGWLAFRSRVNGVYLSILTQAMTLALALWLFQNDSGFRGNNGLSGLQNIP 208 Query: 174 S----SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 ++ + L + W+ + R IRD++ L + Sbjct: 209 GLDGVGQARLSVWFLWASAAALALFYVLAAWVVGGKFGSVIRAIRDDETRVRFLGYPVEG 268 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 KL+ F +++ +AGA + I+P +I + V +GG L Sbjct: 269 FKLAVFTLAAMITAIAGALYYPQAGIINPAELMPIASIYLAVWVAIGGRGRLYGAMIGAI 328 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + G N L + + + ++ LV L + Sbjct: 329 VVSLLSSWFTGGRAPDLN-LPGYAVKWVDWWQVALGLSFVLVTLFAPKGIAG 379 >gi|311106495|ref|YP_003979348.1| high-affinity branched-chain amino acid transport system permease BraD 1 [Achromobacter xylosoxidans A8] gi|310761184|gb|ADP16633.1| high-affinity branched-chain amino acid transport system permease protein BraD 1 [Achromobacter xylosoxidans A8] Length = 308 Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 95/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + IY + A G ++V G +G+++ Y IGAY ++ + Sbjct: 12 FFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTNSGLPIPF 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I ++ V+ +++G G + + + + LI + L W + G Sbjct: 72 IIAAMLVVAIVVTGIYGFSVERVAYRPVRGSPRLVALISAIGMSIFLQNWVALGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + V ++F V +++ L + L+++ + + A Sbjct: 129 ----RDMAVPSLVSGAVQFHMGSDFDVTVPYSRIMIIVVTVLLMIGLTLFIKYSRMGRAS 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + L F + + + G A + +++ F I Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFVMGAILAAVGGVLIAITIGKLN-PFIGFLAGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L + ++ F + + Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAFSLLILILLFRPTGLL 300 >gi|221067280|ref|ZP_03543385.1| inner-membrane translocator [Comamonas testosteroni KF-1] gi|220712303|gb|EED67671.1| inner-membrane translocator [Comamonas testosteroni KF-1] Length = 307 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 86/303 (28%), Gaps = 14/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ Y IGAY ++ S G L + Sbjct: 12 LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGDIYMIGAYIGLVTLSAIGTQSGLPVWA 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + I I Sbjct: 72 IIGLMLVVAVFVTGVYGLVVEQVAYKPVRQSPRLVALISAIGMSIFLQNWVALGQGARDM 131 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ F V ++ L ++ ++++ + + A R + Sbjct: 132 AVPSLLPGAINFHMGDFEVFIPYTRVLIIAVTVVLMIALTMYIKHSRMGRASRACAQDMH 191 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + + + G A + +++P F I + +LGG+ Sbjct: 192 MANLLGIDTNKVISFTFVLGAVLAAVGGVLIALAVGKLNPF-IGFLAGIKAFTAAVLGGI 250 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL + ++ F L +++ R Sbjct: 251 GSIPGAMLGGVILGVAETFAAAYISSEYKDIVAFG-------------LLVTILMFRPSG 297 Query: 339 LLR 341 LL Sbjct: 298 LLG 300 >gi|148258850|ref|YP_001243435.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146411023|gb|ABQ39529.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 356 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 110/322 (34%), Gaps = 13/322 (4%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---R 87 ++ +I I+ +++G G +S + Y IG+Y+ I Sbjct: 29 PFIFPGAKALNVAAKICIFAALVASYDLLLGYTGSVSFAHTMFYGIGSYAIAIALYGLGP 88 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 S+ + + ++ + +GL SL+ + A+ TL ++ F + + +T G+ Sbjct: 89 NWTSVAVAVAAGLPLALLLALAIGLFSLRVEAIFFAMITLAVASAFLVLASQLSWLTGGE 148 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G TV +F FP + I YY++L C L +L + + Sbjct: 149 DGRSFQLPELLRPGTVFIGKEWFGFPING---RILTYYLVLSACALMILALLRVVNSPFG 205 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI-SPDMFKFSEN 266 + IR+N+ +L +F A +++ AG A FS Sbjct: 206 RVLQAIRENRFRAEALGYRTVFHLTYANCIAAMIAAGAGMLNALWLRYAGPDTSLSFSIM 265 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGM------NFYYFNSLLKFDCSFNMRH 320 + ++ +V++GGM ++ AI I + L R Sbjct: 266 LDILLMVVIGGMGTIYGAIIGAAIFILAQNYLQALMSIASTAAADAGLPLLPGLLHPDRW 325 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 + + + ++ Sbjct: 326 LLWLGLLFIASVYFFPTGVVGR 347 >gi|146342705|ref|YP_001207753.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146195511|emb|CAL79536.1| Putative branched-chain amino acid ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 380 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 95/325 (29%), Gaps = 30/325 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ ++ + L + + + L++ M +++ G G+L+L + + GA Sbjct: 10 AIYAIFIVAIMLVPLIMDSFWLNRLAKYLVFGMLGIAVALSWGYAGILNLGQGLFFGAGA 69 Query: 79 YSYVILGS--------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 Y + +W P + L + Sbjct: 70 YMLAMSLKLASSTSLQQGSDKPVPDFMLWNAEPGAKTELCCINKASFLWLPFQSQWFGVA 129 Query: 125 ATLIMSEIFQNIL----------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 LI+ + +L I + + + A + + L Sbjct: 130 MGLILPVVIAFVLGSIVFRKRIAGVFVSIITLALVLLVRLVMIDAQPVTNGFNGLTDLGW 189 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 F F Y + YY++ + + L T + IRD+Q L + Sbjct: 190 FKLGEFEFDPYVVPTYYLIAISLSVMLVLARLLVETRAGVILQAIRDDQNRARYLGFDVP 249 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 + FAVS+ G AG + + SP S +I ++ +GG S+ Sbjct: 250 AYQTFFFAVSALIAGFAGMLYVIVSEFASPTFMDLSFSITMVVWAAVGGRASILGACIGA 309 Query: 289 AILIGVVELCCGMNFYYFNSLLKFD 313 ++ + + Sbjct: 310 ILINMISATVSETEGFAEAWKAIIG 334 >gi|288922862|ref|ZP_06417026.1| inner-membrane translocator [Frankia sp. EUN1f] gi|288345788|gb|EFC80153.1| inner-membrane translocator [Frankia sp. EUN1f] Length = 826 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 123/337 (36%), Gaps = 16/337 (4%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + ++ L + L + + T+ + + ++ + +++V G G +SL Sbjct: 335 DPRLAMIIRLVGLAVLAVTATVVLTRGDSLWVFLVTKAVVMGIIFLSITVVTGMSGQISL 394 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 AIGA++ + RY LS+ + + A ++ G ++ LP + G + AIATL Sbjct: 395 CQGTFAAIGAFTVYQMVVRYDLSVLVAALIGAAVAAVVGALLSLPIRRLGGIWTAIATLA 454 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + F +L+K + G + + + + + Sbjct: 455 FAYFFDAVLVKLSWVGGGDEAVLQGTAVPRPVIGPWD-----------LGDDKYYLVFAS 503 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + A+++L LR+ +R ++ S+ + +L AFAVS+ G+ GA Sbjct: 504 IVLVVVAAVVLQLRKGTFGRTLVAMRGSEVGAESIGISSARVRLIAFAVSAFIAGLGGAL 563 Query: 249 FAASRDRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC--CGMNFYY 305 A ++ +S F + + +V+ G ++ A A L + Sbjct: 564 LAMAQKDVSYGTNFGPFAALFWVVMVVTLGSRTIRGALNAAAAFALFEPLILSGTFIAWI 623 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMR--SHSLL 340 S F + + V+ + L+ Sbjct: 624 ARSEDAVPDFFPITGNWVFVLFGLAALQFARHPEGLV 660 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 61/217 (28%), Gaps = 3/217 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + ++Y + A G + + G+ +L + A + W +P Sbjct: 14 LLQGLPPGVVYSLVALGFVLTYKTSGVFNLAFGAQAYVSA---AMYFKARITWEWPTVPA 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++GL + L A + + L P + A Sbjct: 71 VILAVFVLPPLIGLVLERLIFRPLRTAPAVARLVVAAGLAVAIPYLFDILAKFTAVAGET 130 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F P + + + ++ R +AI R + ++ K Sbjct: 131 PVGVAPDGANVFYDPFGVYAFSRDELVSMGVVLVAVVGLVALFRFSAIGVRMRAVVESPK 190 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ +SS F G+AG A + Sbjct: 191 MTELNGIAADRISALSWVLSSFFAGIAGVLIAPRFNT 227 >gi|311105871|ref|YP_003978724.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310760560|gb|ADP16009.1| inner-membrane translocator 31 [Achromobacter xylosoxidans A8] Length = 290 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 94/315 (29%), Gaps = 26/315 (8%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 L + + +Y + A GL+++ G L +++ A + Y+ +L R Sbjct: 1 MLDPAILFSSVLNGLTTGAVYALIALGLTLIYGVLHIINFAHGAALMVALYAVYLLKDRL 60 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 G+ + +P+ A G + + L+++ +L + Sbjct: 61 GIDPYAALPLVVAGMFALGYALQRYVINRASHGKDENILLVTLGLAIVLENLALVWFKSD 120 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 T+ + + + G ++A + +R T + Sbjct: 121 -----------TRTIDTAYTLSTVEIGPAMIALPKVIAFCGALAVAAVLFWIIRSTDLGR 169 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A R + ++ + + +F + A +G A F + ++ Sbjct: 170 AIRAVAKEKQGAKLMGIDVEKVYALSFGIGMACLGAAACFLLPAYYV--NPQVGGGFVLV 227 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 +IV+LGGM S ++ V + + + Sbjct: 228 AFTIVVLGGMGSFVGALVGGLLIGVVESIGGLFLGDSLGQMG-------------IFAIF 274 Query: 329 FLVILMRSHSLLRLR 343 V+L R L R Sbjct: 275 IAVLLFRPQGLFGAR 289 >gi|118590374|ref|ZP_01547776.1| inner-membrane translocator [Stappia aggregata IAM 12614] gi|118436837|gb|EAV43476.1| inner-membrane translocator [Stappia aggregata IAM 12614] Length = 311 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 102/314 (32%), Gaps = 28/314 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----------SYVILGSR 87 + + IY + A G ++V G +G+++ + +GA+ + + + Sbjct: 8 LINGVTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMVGAFIALIFIVAFGITAGLPVAL 67 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 L++ ++ +S ++ A G + + + +A LI + L + I+ G Sbjct: 68 LILALIGVLVISMALTAAWGWTVERIAYRPLRGSFRLAPLITAIGASITLQNFVQISQGA 127 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 + + T F +I +++ L + +T++ Sbjct: 128 RNKPLQPLISGGFTLSDGGPDGSGFIVQLSYSQI---LIIVVTVVLMVGFTFLINKTSLG 184 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 A R ++K + + F + + +AG F I F + Sbjct: 185 RAQRACEQDRKMASLVGVNVDRTISLTFVMGAGLASVAGLMFLLYYGVIDFY-IGFLAGV 243 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ SL ++ + G + + F Sbjct: 244 KAFTAAVLGGIGSLPGAMLGGLLIGLIETFWSGYFSVEYKDVAAFS-------------I 290 Query: 328 LFLVILMRSHSLLR 341 L +V++ LL Sbjct: 291 LAIVLIFMPEGLLG 304 >gi|313500824|gb|ADR62190.1| Inner-membrane translocator [Pseudomonas putida BIRD-1] Length = 495 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 222 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRFAPGAIEFYPLIALPVAFAVSAGVGMA 281 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W I + + + + + + Sbjct: 282 LER--TVIRHLYGRPLETLLATWGISLILIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 339 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + L L RT + R + N+ + + AF + Sbjct: 340 VLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 399 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L +L Sbjct: 400 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 457 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 458 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 492 >gi|260466751|ref|ZP_05812937.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259029481|gb|EEW30771.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 300 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 101/304 (33%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +GA++ +I+ G + + V Sbjct: 8 LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMVGAFAALIVFLILGALFYSVPVV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A++ ++ + + +A L S ++ + V Sbjct: 68 IALLVMMIVAMLLTSLYNWTIEKVAYRPLRGSFRLAPLITAIGMSITLSNFVQVTQGPRN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + V + +++ L A + +T++ A R ++K Sbjct: 128 KPI---PPMVSEVYNINGVSVSLKQIIIVIVTALLLALFWYLVNKTSLGRAQRACEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG F ++ F+ + + +LGG+ Sbjct: 185 MAALLGIDVDRTISITFIMGAALAAVAGTLFLMYYGVVAF-SDGFTPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + + + + F L +V++ Sbjct: 244 GSLPGAVLGGLLIGFIESMWSAYFSIDYKDVAAFS-------------ILAIVLIFLPSG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|169350914|ref|ZP_02867852.1| hypothetical protein CLOSPI_01690 [Clostridium spiroforme DSM 1552] gi|169291976|gb|EDS74109.1| hypothetical protein CLOSPI_01690 [Clostridium spiroforme DSM 1552] Length = 291 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 101/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G +++ +GAY S +GL + L + + Sbjct: 7 IINGLSTGSMYALVAVGYTMVYGIAKMINFAHGEIIMVGAYITYACMSVFGLPMILAVIL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G++ + + ++A LI + +L I G A Sbjct: 67 SIIGCALLGIVTERVAYRPLRGSGSLAVLITAIGVSYLLQNLFLIIFGSA---------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T +I + L+ +A ++ ++ +T + A R + ++ K Sbjct: 117 -SLTFPKIIPSGTIHLGAISMSYVTIATLVITAISTALLLFFINKTKLGKAMRAVSEDGK 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I FA+ SA +AG + I+P I +LGG+ Sbjct: 176 AAQLMGINIDTTIALTFAIGSALAAIAGVIYGTKFSLINPY-IGAMLGIKAFIAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ F+ + F L ++L++ Sbjct: 235 GSIQGAMIGGLIIGIAESFTITYISSAFSDAVVFG-------------ILIFILLIKPAG 281 Query: 339 LLR 341 L Sbjct: 282 LFG 284 >gi|149375742|ref|ZP_01893510.1| Branched-chain amino acid ABC-type transport system, permease component [Marinobacter algicola DG893] gi|149359867|gb|EDM48323.1| Branched-chain amino acid ABC-type transport system, permease component [Marinobacter algicola DG893] Length = 307 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 93/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90 + + Y + A G ++V G +G+++ Y IGAY+ + + L Sbjct: 11 LINGLTIGSTYALIAIGYTMVYGIIGMINFAHGEIYMIGAYTALIAITGLAALGIAWLPL 70 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + + + ++S + G + + + + LI + L + + G Sbjct: 71 ILIVALVCAMIVSSSMGWAVERVAYRPVRGKHRLIPLISAIGMSIFLQNYVHLAQGS--- 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + RF S + + L++ R+ I A Sbjct: 128 ----RNIGFPALIEGGFRFGAEDSFQTSITYMQITIFATTLVCMTILSLFISRSRIGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + + L + F + +A +AG I +F F + Sbjct: 184 RAVSQDLGMANLLGIDTNRIISATFVIGAALAAVAGLLLGMYYGSID-PLFGFIAGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ IL + G + ++ F + + Sbjct: 243 TAAVLGGIGSIPGAMLGGLILGVAESMTSGYLSGEYKDVVSFGLLILILLFKPTGLL 299 >gi|256544600|ref|ZP_05471972.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Anaerococcus vaginalis ATCC 51170] gi|256399489|gb|EEU13094.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Anaerococcus vaginalis ATCC 51170] Length = 295 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 100/303 (33%), Gaps = 21/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L++ +GAY+ + L + + Sbjct: 7 LFNGLQLGSIYALIALGYTMVYGVAKLINFAHGDIIMVGAYTIFFVVQTSLFRSGLPLYL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + ++G+ + L ++ I I + + Sbjct: 67 AIIPAIIACTLLGVVIERIAYKPLRNSSSISILITAIGVSLFLE-------NLFVKVFTA 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V SL + + ++ L+ + +++ +T + ++ K Sbjct: 120 NARPVPSLFNQASLNIFGIRLSFQTIFTIVLTIILTIILQIFISKTKYGKMMLAVSEDYK 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G+A + +S +I+ I + ++GG+ Sbjct: 180 ASSLVGINVDNTMTMTFAIGSALAGVASLLYVSSYPQIT-PFIGSMLGIKAFTAAVVGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL + + + ++ + L LV++++ Sbjct: 239 GSIPGAVIGGFILGMIEVMTRAYLSSSYADA-------------IVFLVLILVLIVKPTG 285 Query: 339 LLR 341 +L Sbjct: 286 ILG 288 >gi|115523407|ref|YP_780318.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115517354|gb|ABJ05338.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 353 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 45/338 (13%), Positives = 109/338 (32%), Gaps = 14/338 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ + ++ +I I+ +++G G +S + Y Sbjct: 13 VLSILLILIVTALALAPFLFPGAKALNVATKICIFAALVASYDLLLGYTGSVSFAHTMFY 72 Query: 75 AIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IG+Y+ I ++ + + ++ + +GL SL+ + A+ TL ++ Sbjct: 73 GIGSYAIAIALYGMGPSWTAVATGLAIGLPLAALLALGIGLFSLRVEAIFFAMITLAVAS 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F + + +T G+ G + F + YY++ C Sbjct: 133 AFLVLASQLSWLTGGEDGRSFQLP----ELLRPGTVFVKNFFGFTLNGRTLTYYIIFIGC 188 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 +L + + + +R+N+ +L +F A +++ AGA A Sbjct: 189 AAMILGLLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANCLAALVAASAGALNAM 248 Query: 252 SRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 FS + ++ +V++GGM ++ AI I + + Sbjct: 249 WLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIVGAAIFILAQNYLQALMGVASTAAA 308 Query: 311 KFDCSF------NMRHTTLMVIALFLVILMRSHSLLRL 342 R + + + ++ Sbjct: 309 DAGLPLLPGLLHPDRWLLWLGLLFIASVYFFPTGIVGR 346 >gi|300703665|ref|YP_003745267.1| high-affinity branched-chain amino acid transporter permease (livm or livh) [Ralstonia solanacearum CFBP2957] gi|299071328|emb|CBJ42646.1| putative high-affinity branched-chain amino acid transport system permease (livM or livH) [Ralstonia solanacearum CFBP2957] Length = 406 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 +L + V L+ A Y ++ +I+ Y + A L +V G G+LSL + Sbjct: 32 SLLVCIGVPVCALVVPQGHALHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGL 91 Query: 73 AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 +A+G Y+ + +++ L Sbjct: 92 FFALGGYAMGMYLMRAIGRDGVYQSDLPDFMVFLDWKALPWFWHGTEHFAWAALLVVLVP 151 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + A + +I + + + R FP Sbjct: 152 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 211 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + V ++ L+ + + IRD + + + KL Sbjct: 212 AAVSTRTVLFVATFIALVLAFIACRAIVTSKFGRVVTAIRDAEARAMFSGYSPLGYKLFV 271 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 + S+ G+AGA + I+P +I + V +GG +L ++ G Sbjct: 272 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLVGPIVGAFLVNGA 331 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + ++ LV L + +L Sbjct: 332 KTVLTAW--------------VPEYWLFVLGAVFVLVTLFLPNGVLG 364 >gi|294085323|ref|YP_003552083.1| branched-chain amino acid ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292664898|gb|ADE39999.1| branched-chain amino acid ABC transporter, permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 332 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 2/287 (0%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL + L + L +Q+Y S I +I+ A ++++G G+ SL ++ +AI Sbjct: 11 LLIALLFLSVMAILPLIVTQRYFLSQIIVFMIWASVAVQWNVLIGHAGVFSLAQMLIFAI 70 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY +L S + +S W +P++ +I+ C +GL L+ Y+A+ T +S + + Sbjct: 71 GAYGLAMLNSYFDISPWAAMPLAGLIAALCAAFIGLACLRLGTAYVALLTFAISYMVFVL 130 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 +I G R + T L + + +YV+LG+ S Sbjct: 131 IITEATCYTNVGGG--CQRFFGGTTGFSRLDDLGFRKLLRGQWMVGNFYVVLGVLAASLI 188 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + + A+ + D++ S +L AF +++ F G+ GA +AA Sbjct: 189 AAISVIHGRLGLAFLALSDSRTYAISRGLNRTKFQLLAFVITAFFTGLTGAAYAAHFKSA 248 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 P +F FS + V+++VI+GG+ S A+++ VVEL Sbjct: 249 GPSLFDFSLLMFVLAMVIVGGLKSTWGPLVGAAVMMVVVELAKDYGD 295 >gi|119720481|ref|YP_920976.1| inner-membrane translocator [Thermofilum pendens Hrk 5] gi|119525601|gb|ABL78973.1| inner-membrane translocator [Thermofilum pendens Hrk 5] Length = 344 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 115/325 (35%), Gaps = 24/325 (7%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI- 96 ++ S + IY + A L+ G+ G+ + V Y +GAY L L + + Sbjct: 7 FLISWLTLLGIYAILALTLNFESGTSGVTNFGKVFFYGLGAYVGATLTVYLFLLLNGVDV 66 Query: 97 -----PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG-- 149 + I + P+L L++AT + L+ + I G A Sbjct: 67 SKTPPYDVSGIVLLGELAGKNPALNLGLLALSLATAFLVAGVIGYLLSYPIIRVGPAFVG 126 Query: 150 ------------IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + S+ F + + E+ ++L + + + Sbjct: 127 FTLLSTGELFRIFLQHYEPVGGSRGLMSIPGPFSWVPQPRLREVLFLALVLAVLAATYLV 186 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + + R +RD++ A + + K + + S F G+AG A ++ Sbjct: 187 MDRLTNSPLGRTLRAVRDDEVAALCMGKHVPKLKATVLFIGSGFSGVAGVLLAYYLTSVN 246 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 PDMF + V +++ILGGM +L +I + + +++ D Sbjct: 247 PDMFVPAVTFNVWAMIILGGMGNLRGALLGASIFTFIDRALSFVTPQLGVTVISPDYVRG 306 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 +MV+ L L R LL Sbjct: 307 FAVGLVMVLVL----LYRPQGLLPE 327 >gi|162453857|ref|YP_001616224.1| putative branched-chain amino acid ABC transporter, permease protein [Sorangium cellulosum 'So ce 56'] gi|161164439|emb|CAN95744.1| putative branched-chain amino acid ABC transporter, permease protein [Sorangium cellulosum 'So ce 56'] Length = 377 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 89/299 (29%), Gaps = 13/299 (4%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------GSRY 88 + ++ + L Y + A GL ++ G G+LSL + + +G Y+ + Sbjct: 33 SDFRLNLLGKFLTYAIVALGLDLIWGYGGMLSLGQGLFFGLGGYAMAMYLKLETSGSRLP 92 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM------SEIFQNILIKWKP 142 W + + + + + + LI Sbjct: 93 DFMSWSGLEALPLFWEPFRSPVVALCAVVLLPMAIASAVGYLVFRSRVQGVYFSLITQGL 152 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + + +L F F + +Y+V L + L Sbjct: 153 TLIASILFIGQQAVTGGTNGITNLKTIFGFARGATGTQTVLYFVTLFCLGALYLLCRKLT 212 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ +RD++ L + K FA+S+ G+AGA F ISP Sbjct: 213 QSRFGRLLVAMRDDENRVRFLGYNPVTLKTLVFALSAGMAGIAGALFVCQVGLISPSSMG 272 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 ++ +++ V +GG +L ++ + + ++ Sbjct: 273 VIPSVEMVTWVAVGGRGTLIGAVVGAILVSLGKSALSESYPEVWQLGFGALFAASVMLL 331 >gi|284047402|ref|YP_003397741.1| inner-membrane translocator [Acidaminococcus fermentans DSM 20731] gi|283951623|gb|ADB46426.1| inner-membrane translocator [Acidaminococcus fermentans DSM 20731] Length = 298 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 95/303 (31%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G +++ G + L++ Y +GAY + ++ GL + V Sbjct: 14 IVNGVSLGSIYALIALGYTMIYGIIKLINFAHGDIYMLGAYIGFVAITKAGLPFLPALIV 73 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + + G+I+ + K + IA LI + L + Sbjct: 74 SMIGAALAGIIIERIAYKPMRNAPRIAALITAIGVSFFLENGMILLVSPQPRTFPPVFAP 133 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ +L+ L ++ + RT A R + + Sbjct: 134 TVYH-----------IGGIVVNNQQIMILVSALLLMLALTYIVNRTKAGKAMRAVSFDAD 182 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG + I P M I ++GG+ Sbjct: 183 AAKLMGIDTDRVISTTFALGSALAAAAGVLVGIYYNSIDPLM-GMMPGIKAFIAAVVGGI 241 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L I+ V + G + F L L++L + Sbjct: 242 GILPGAMLGGIIMGLVEAMVSGFFSSTYRDAAAF-------------AILILILLYKPTG 288 Query: 339 LLR 341 LL Sbjct: 289 LLG 291 >gi|228914557|ref|ZP_04078166.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844876|gb|EEM89918.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 317 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 128/322 (39%), Gaps = 31/322 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F YYV L + ++ Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + + Y+ S L + R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T ++ + +V+L+ L+ Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295 >gi|116749572|ref|YP_846259.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116698636|gb|ABK17824.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 324 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 68/324 (20%), Positives = 134/324 (41%), Gaps = 33/324 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + +L+FL + Y + IL+Y + A GL+I+VG G + + + IG Sbjct: 16 IVLGAAVLVFLIVAPFVLSNYWLRVLTSILMYGIVAQGLNIIVGYTGYHAFGNSVFFGIG 75 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS + + L L + ++ ++ +++G P L+ G Y AIAT+ ++ ++ Sbjct: 76 AYSTGVGMALG-LPFGLALALTVPVAVVVAVMVGWPLLRLSGHYFAIATVALNMAMMEMV 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I IT G G+ + + +Y V+L + + + Sbjct: 135 INVGGITGGAQGLALPINPM-----------------GPAMLYKIIYLVMLLILAGATAT 177 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + WL R ++ A R +RD+++ + K+ A+A S +F +AG +A I Sbjct: 178 VYWLDRGSLGYALRALRDSEQGAQVMGINTTAMKIMAWAASGSFTALAGGVWAYWFTFIE 237 Query: 258 PDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P F + +I ++++GG+ ++ A L + G F Sbjct: 238 PSSAFDINISIKGYVMMLMGGLGTVFGPLIGAAFLELFATIIWG--------------KF 283 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 H ++ + + LV+ + LL Sbjct: 284 LKIHLLILGMLIVLVVTLMPQGLL 307 >gi|317121366|ref|YP_004101369.1| inner-membrane translocator [Thermaerobacter marianensis DSM 12885] gi|315591346|gb|ADU50642.1| inner-membrane translocator [Thermaerobacter marianensis DSM 12885] Length = 367 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 122/294 (41%), Gaps = 36/294 (12%) Query: 53 AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112 + ++V G G +S + Y +GAY+ +L + G+ ++ +A+++ +++GL Sbjct: 87 SIAWNLVGGFAGQVSFGFAVFYGLGAYTAALLITAGGVHPYVSFAGAALVAAVASLLIGL 146 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 P+ + RG Y AIAT+ ++E + ++ + I +G V +R F+ Sbjct: 147 PTFRLRGPYFAIATIGVNEAVRVVMNNLQFI-GAASGYRVMERARFVMEEH--------- 196 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 Y + + ++ + + R+ A + IRD++ A + KL Sbjct: 197 -----------YLTAVVLFAVALLASVLVARSRFGLALQAIRDDEDAAADVGINPFLHKL 245 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAIL 291 + A+++A +G AG +A I P F F+ ++ ++ + ++GG+ ++ A+ Sbjct: 246 AVHALAAALVGAAGGIYARYAAFIDPSGVFNFNNSVSILLMPVIGGLATVWGPVIGGAVY 305 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 V E F H + L L+IL ++ L Sbjct: 306 GIVQEELVA--------------RFTDLHLGIYGALLILIILFEPGGVMGLARR 345 >gi|312141172|ref|YP_004008508.1| branched-chain amino acid ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311890511|emb|CBH49829.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 346 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 111/291 (38%), Gaps = 15/291 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + A + +++ L Y + Y + A G+ I G LS+ Sbjct: 27 IAIEAGITLVVVAAVLVWMGPSLYRQDLVFLAATYSLIALGMYIPFVMAGSLSMAYSAYA 86 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AIGAY+ ++ + GLS+W + A+++ +I+ L + K G YLA TL+ F+ Sbjct: 87 AIGAYAVALVSVKTGLSMWWGWVIGALVAAVVAVILALATQKLSGFYLAAVTLLFGIAFE 146 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + LI T G AGI + + + + + + Sbjct: 147 HWLIDGPDFTGGSAGISGVEAVT---------------LFGWQPPRYTLVVLAILFVCAI 191 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A ++ +R++ R RDN+ A S + A A+ +A G+ F S Sbjct: 192 AVVVDRMRKSVWGLTLRAARDNKNAARSSGVNPAHLTVIALAIGAAIASTGGSLFTVSVQ 251 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 ++P+ F S + I + I+GG S I++ V G Sbjct: 252 AVTPETFTLSIVFLAIFMPIIGGRNSAWGAPLGALIVVIVTLNMPGYQGSG 302 >gi|224370455|ref|YP_002604619.1| ABC-type branched-chain amino acid transport system, permease component [Desulfobacterium autotrophicum HRM2] gi|223693172|gb|ACN16455.1| ABC-type branched-chain amino acid transport system, permease component [Desulfobacterium autotrophicum HRM2] Length = 310 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 106/307 (34%), Gaps = 17/307 (5%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + +Y + A G S+V G L +L+ Y IG ++ + + ++ ++ + Sbjct: 13 INGITIGGVYALIAIGYSMVYGVLSMLNFAHGELYMIGGFTGWWVLELFSVAHVPVMNAA 72 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +IS + MG+ +L + + N+L+ ++ + + + Sbjct: 73 LLISLMILLAMGVSALLGLVIERVAYRPLRNAPRMNLLLSSLGVSIFIQNFILYFQGAKV 132 Query: 160 GTTVRSLIRFFR---FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 S + F V+ +V+L L + L ++RT + + R + Sbjct: 133 KVFHISQLIPEGLRTFHIGGVVISFMRIFVMLACFLLMVLLTLIIKRTNVGKSIRATAQD 192 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +A + + F + SA G AG + ++ + F + + +LG Sbjct: 193 IEAAAFMGIDTDKIIVIVFLIGSALGGAAGVLVSLLFTQVDYYV-GFQAGLKGFTAAVLG 251 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ L + + ++ F + L V++ R Sbjct: 252 GIGSIPGAMVGGLFLGLCEAMAVTFFPSAYKDVVAF-------------LILIAVLIFRP 298 Query: 337 HSLLRLR 343 L+ + Sbjct: 299 QGLMGEK 305 >gi|182677965|ref|YP_001832111.1| urea ABC transporter, permease protein UrtC [Beijerinckia indica subsp. indica ATCC 9039] gi|182633848|gb|ACB94622.1| urea ABC transporter, permease protein UrtC [Beijerinckia indica subsp. indica ATCC 9039] Length = 376 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 94/348 (27%), Gaps = 36/348 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ +V L + + + M + L Y A GL + G G+LSL I + + Sbjct: 15 IVGIVILSALLIVILPLALDSFRLQMVGKYLTYAFVALGLVLCWGYAGILSLGQGIFFGL 74 Query: 77 GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 G Y + + Sbjct: 75 GGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQLTELPYFWRPFHSFGFTTLAIVAVP 134 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174 A F + + +A L L + + Sbjct: 135 AIFAGIIGFAMFKRRVGGVYFSIITQAIASILTILIIGQQGYTGGINGITDLRTLHGWDI 194 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + +Y+V +G+ S + +++ + + +RD + + K+ Sbjct: 195 RTDAAKSILYFVCVGLLLASILLAYYVKSSKLGRILVAMRDKEDRVRFSGYDVANFKVFI 254 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F +S+ + GA F +SP +I ++ +GG SL T ++ Sbjct: 255 FCLSAILSAIGGAMFTLQVGFMSPSFVGTVPSIEMVIYCAVGGRLSLLGAVYGTLLVSWA 314 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 SF + V+L+ + L L Sbjct: 315 KTSLSE--------------SFPELWLFGLGGLFIAVVLVFPNGLAGL 348 >gi|163852793|ref|YP_001640836.1| urea ABC transporter, permease protein UrtC [Methylobacterium extorquens PA1] gi|218531619|ref|YP_002422435.1| urea ABC transporter permease UrtC [Methylobacterium chloromethanicum CM4] gi|163664398|gb|ABY31765.1| urea ABC transporter, permease protein UrtC [Methylobacterium extorquens PA1] gi|218523922|gb|ACK84507.1| urea ABC transporter, permease protein UrtC [Methylobacterium chloromethanicum CM4] Length = 393 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 100/362 (27%), Gaps = 36/362 (9%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N + K + +++ + L + + ++ + L Y A GL I G G+LSL Sbjct: 21 NPFMKPVEWVSLALLAGVILVVLPLVLDGFRLNLVGKYLTYAFVALGLVICWGYAGILSL 80 Query: 69 NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 + + +G Y + + L Sbjct: 81 GQGVFFGLGGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQITELPWFWHPFQSLPLT 140 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167 + +A L L + Sbjct: 141 LLLVVAVPVAFAFLISVAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 200 Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + + +Y+V G+ + +++++ + +R+ + + Sbjct: 201 RTLHGWDIRQDSAKFVLYFVNGGLLIGCILMAQYVKKSKLGRILVAMREKEDRVRFSGYS 260 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + K+ A+ +++AF + GA F +SP ++ ++ +GG SL Sbjct: 261 VAGFKVFAYCLAAAFAAIGGAMFTLQVGFMSPSFVGIVPSVEMVIYTAVGGRLSLFGAVW 320 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 T ++ F SF + V+L+ + L + Sbjct: 321 GTLLVNWAKT--------------SFSESFPDLWLFGLGGLFIAVVLIFPNGLAGIWREH 366 Query: 347 NF 348 Sbjct: 367 IE 368 >gi|332526026|ref|ZP_08402164.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] gi|332109869|gb|EGJ10497.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] Length = 307 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 96/305 (31%), Gaps = 10/305 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G + L++ +GA + + + S + Sbjct: 8 IINGLVLGSMYALVALGYTMVYGIINLINFAHGEVLMVGALTSWTVVTLMADSGLPGWAM 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I + + + A I Sbjct: 68 MLISLPVAIVICSTLNFTIEKLAYKPLRNAPRLAPLITAMGMSLLLQTIAMIIWKPNPKP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +L + ++++ + RT + A R +N + Sbjct: 128 YPLLLPTDP----IDLGGPVITVTQCLILGITVVVLSALMYLVNRTKLGRAMRATAENPR 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + + +AG +AA+ + M F + + +LGG+ Sbjct: 184 VATLMGVRPDMVISATFIIGATLAAVAGVMWAANYGTVQHSM-GFLPGLKAFTAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L+ +L V + G +L + +AL LV+ +R Sbjct: 243 GNLAGAVVGGLLLGLVEAIGAGYLGDLTGGVLG-----SHYADIFAFVALILVLTLRPAG 297 Query: 339 LLRLR 343 LL R Sbjct: 298 LLGER 302 >gi|308451205|ref|XP_003088583.1| hypothetical protein CRE_26900 [Caenorhabditis remanei] gi|308246494|gb|EFO90446.1| hypothetical protein CRE_26900 [Caenorhabditis remanei] Length = 808 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 81/262 (30%), Gaps = 21/262 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ L + + I ++ +Q + + A G++ V+ + G + L+ A Sbjct: 509 LFSLIILVLFFSFSSPFFFNTENIMTIALQTSVIGIMAIGVTFVIITAG-IDLSLGSVVA 567 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + I + + ++ +++G + + IATL + + Sbjct: 568 FSGVAVGICATLGL--PLPVCIIAGVLAGGMCGYVNGLLVTKMTIPPFIATLGLMMSVR- 624 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 G + R + + Y +F ++ Sbjct: 625 ----------GINMVMTDGRAIYFADYPMFKTLAQGRLFDVLPYPVFYLVIVA------L 668 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 L++T I + N+ A + K+ +A G+AG A+ + Sbjct: 669 VGAYILKKTVIGRYVYAVGSNEVAAHLSGIKVQRVKIFVYAFCGLLTGIAGVILASRLNS 728 Query: 256 ISPDMFKFSENIIVISIVILGG 277 + I+ V++GG Sbjct: 729 -GQPTVGVGYELEAIAAVVIGG 749 >gi|126464762|ref|YP_001045875.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] gi|126106573|gb|ABN79103.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] Length = 332 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 118/310 (38%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +G I + Sbjct: 45 FLMKLLCFALFAAAFNLLLGYTGLLSFGHATFFGGSAYFTAHAVKVWGWPPEFGILLGVA 104 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + A G++MG+ +++ +G Y A+ TL +S++F ++ Sbjct: 105 GAAALGLLMGVIAIRRQGIYFAMITLALSQMFFFFCLQAAFTHG--------------ED 150 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MY+ +LG L I + + IR+N+ Sbjct: 151 GIQSVPRGHLFGVIDLSNATNMYFFVLGTFTLGMLAIWRFVNSPFGMILKAIRENEPRAI 210 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AG A + + + VI + +LGG+ +L Sbjct: 211 SLGYSVAEYKLGAFVMSAALAGLAGGVKALVFQFATLTDVGWQMSGEVILMTLLGGIGTL 270 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +A+++ + F T + + +L+ ++ Sbjct: 271 VGPVVGSALVVTLQNYLATSQFPV---------------TIITGLVFMACVLLFRRGIVG 315 Query: 342 LRTPSNFLER 351 S R Sbjct: 316 EFYASRLGRR 325 >gi|311695947|gb|ADP98820.1| high-affinity branched-chain amino acid ABC transporter, permease protein [marine bacterium HP15] Length = 307 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 93/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90 + + Y + A G ++V G +G+++ Y IGAY+ + + L Sbjct: 11 LINGLTIGSTYALIAIGYTMVYGIIGMINFAHGEIYMIGAYTALIAITGLAALGIAWLPL 70 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + + + ++S + G + + + + LI + L + + G Sbjct: 71 ILIVALLCAMIVSSSMGWAVERVAYRPVRGRHRLIPLISAIGMSIFLQNYVHLAQGS--- 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + F + + + ++ L++ R+ A Sbjct: 128 ----RNIGFPALIDGGFNFGSGDGFQMSLSYMQITIFITTLICMTALSLFISRSRTGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + + L + F + +A +AG + +F F + Sbjct: 184 RAVSQDLGMANLLGIDTNRIISATFVIGAALAAVAGLLLGMYYGSVD-PLFGFIAGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ IL + G + ++ F + + Sbjct: 243 TAAVLGGIGSIPGAMLGGLILGVAESMTSGYLSGEYKDVISFSLLILILLFKPTGLL 299 >gi|293604939|ref|ZP_06687336.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292816767|gb|EFF75851.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 290 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 93/315 (29%), Gaps = 26/315 (8%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 L + + +Y + A GL+++ G L +++ A + Y+ +L R Sbjct: 1 MLDPAILFSSVLNGLTTGAVYALIALGLTLIYGVLHIINFAHGAALMVALYAVYLLKERL 60 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 G+ + +P+ A G + + L+++ +L + Sbjct: 61 GIDPYAALPLVVAGMFALGYALQRFVINRASHGKDENILLVTLGLAIVLENLALVWFKSD 120 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 + + + + G ++A + +R T + Sbjct: 121 TRS-----------IDTAYTLSTVEIGPAMIALPKVIAFCGALAVAAVLFWIIRSTDLGR 169 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A R + ++ + + +F + A +G A F + ++ Sbjct: 170 AIRAVAREKQGAKLMGIDVEKVYALSFGIGMACLGAAACFLLPAYYV--NPQVGSGFVLV 227 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 +IV+LGGM S ++ V + + + Sbjct: 228 AFTIVVLGGMGSFVGALVGGLLIGVVESIGGLFLGDSLGQMG-------------IFAIF 274 Query: 329 FLVILMRSHSLLRLR 343 V+L R L R Sbjct: 275 IAVLLFRPQGLFGAR 289 >gi|171315803|ref|ZP_02905035.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] gi|171099102|gb|EDT43882.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] Length = 295 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 105/308 (34%), Gaps = 19/308 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +I + +Y A GL++ G GL++ V +G Y+ I S+ G + Sbjct: 2 SSFIVHLLTIACLYATMALGLNLQAGYAGLVNFGFVAFAGLGGYAAGI-ASQLGWPLPAA 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + ++A + + + DY IATL ++EI + + +T G GI Sbjct: 61 LALAAGAASVLAVAIARLGRHLSADYWGIATLAIAEILRTFALNEGWLTGGAQGIGGIAP 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L+ + + V G ++ + L A + +R+ Sbjct: 121 LFPGLRAPWAD--------------LAFLAVAAGSLAVAYAACRLLTTGRFGRALKVMRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + K A + AGA + PD SE + +IV++ Sbjct: 167 EPALAVCFGYDPVALKTWASVAGALPAAFAGALLTWYISYVGPDTMVASETFALWTIVMV 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S + + I+ + + + + L L+ + L +L R Sbjct: 227 GGLGSHAGVLAGALIV----QAVYAVAPFLKDWLGVGSDLAGAVRLGLVGLMLLACVLWR 282 Query: 336 SHSLLRLR 343 L+ R Sbjct: 283 PRGLVPER 290 >gi|158424566|ref|YP_001525858.1| branched-chain amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331455|dbj|BAF88940.1| branched-chain amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 305 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 100/313 (31%), Gaps = 30/313 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + + ++ + V+ S Sbjct: 8 LINGLTLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFMVSSFIGLIAFLLLTTVLGISSIF 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + +++ V+ + +G + + + +A +I + +L + + G Sbjct: 68 LVLAIVLVVAMLFTGLLSWTIERVAYRPLRGSFRLAPMISAIGMSILLANFVQVAQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + +I V ++ L A +++T + A Sbjct: 128 KPLPP-------IIPDVIVLMDNNGYQVTLAYKQIVIMAVTVALLAGFWYLVQKTPLGRA 180 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + ++ + F + Sbjct: 181 QRACEQDRKMAALLGVDVDRTISLTFVIGAMLAAVAGTMYLMYYGVVNFND-GFVPGVKA 239 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + + + F L Sbjct: 240 FTAAVLGGIGSLPGAVLGGLLIGLIETFWSAYFSIEYKDVAAFS-------------ILA 286 Query: 330 LVILMRSHSLLRL 342 + ++ LL Sbjct: 287 ITLIFMPQGLLGR 299 >gi|332560904|ref|ZP_08415222.1| ABC branched-chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] gi|332274702|gb|EGJ20018.1| ABC branched-chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] Length = 332 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 117/310 (37%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +G I + Sbjct: 45 FLMKLLCFALFAAAFNLLLGYTGLLSFGHATFFGGSAYFTAHAVKVWGWPPEFGILLGVA 104 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + A G++MG+ +++ +G Y A+ TL +S++F ++ Sbjct: 105 GAAALGLLMGVIAIRRQGIYFAMITLALSQMFFFFCLQAAFTHG--------------ED 150 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MY+ +L L I + + IR+N+ Sbjct: 151 GIQSVPRGHLFGVIDLSNATNMYFFVLSTFTLGMLAIWRFVNSPFGMILKAIRENEPRAI 210 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AG A + + + VI + +LGG+ +L Sbjct: 211 SLGYSVAEYKLGAFVMSAALAGLAGGVKALVFQFATLTDVGWQMSGEVILMTLLGGIGTL 270 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +A+++ + F T + + +L+ ++ Sbjct: 271 VGPVVGSALVVTLQNYLATSQFPV---------------TIITGLVFMACVLLFRRGIVG 315 Query: 342 LRTPSNFLER 351 S R Sbjct: 316 EFYASRLGRR 325 >gi|170738022|ref|YP_001779282.1| urea ABC transporter, permease protein UrtC [Burkholderia cenocepacia MC0-3] gi|169820210|gb|ACA94792.1| urea ABC transporter, permease protein UrtC [Burkholderia cenocepacia MC0-3] Length = 389 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 92/334 (27%), Gaps = 36/334 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI------- 83 + ++ + L Y A GL I G G+LSL + + +G Y+ + Sbjct: 50 FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 109 Query: 84 -----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + + L + Sbjct: 110 DAAATHTQTTPGIPDFMDWNQLTALPTWWKPFHSLPFSILAVLVVPTALAFVIGYAMFKR 169 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188 + + VA L L + + ++ +Y+V Sbjct: 170 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLVLYFVNA 229 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + + W++R+ + +RD + + K+ AF +++ + GA Sbjct: 230 ALLIGALLVGRWVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAIGGAM 289 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 F +SP +I ++ +GG SL ++ Sbjct: 290 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 338 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F SF LM V+++ + L L Sbjct: 339 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGL 369 >gi|111220267|ref|YP_711061.1| high-affinity branched-chain amino acid transport system permease braE [Frankia alni ACN14a] gi|111147799|emb|CAJ59462.1| high-affinity branched-chain amino acid transport system permease protein braE [Frankia alni ACN14a] Length = 723 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 111/320 (34%), Gaps = 19/320 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + + + L + ++ G +G LSL + + + Sbjct: 337 LLLGVPVGVVALLLLTGSWRLGLERSLAGAVVCLSFVVLTGYVGQLSLAQMSLAGVAGFL 396 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L G+ + ++ + G+ +G+ S + RG LA+ TL+ Q + Sbjct: 397 LARLEGELGVPFPIAPLIATFAAAVAGLFLGVVSRRLRGVDLALITLVAGVAIQEAVFGN 456 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G AG V + F S F R + L + + Sbjct: 457 PLVTGGLAGSSVPNPKIFGLDLGLSGAGFPRVQFG---------LLALSVLAAGGYGVAR 507 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 LR + +R N+++ + + K+ AF +S+A G+ G + R+S D Sbjct: 508 LRTADLGRRMLAVRANERSAAAAGIDVRRTKVLAFTLSAALAGLGGCLIGYGQGRLSFDS 567 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + ++ ++I +GG+TS+ + + L Sbjct: 568 FGVTASLFFLAIAAVGGVTSVGGALVGGLL----------APGGLAFTALDRVAGLGEYQ 617 Query: 321 TTLMVIALFLVILMRSHSLL 340 L +A+ ++ ++R L+ Sbjct: 618 QLLCGLAVVVLAVLRPAGLV 637 Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 28/291 (9%), Positives = 70/291 (24%), Gaps = 8/291 (2%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM- 101 +Y GL + + G++++ Y Y L L + ++ + Sbjct: 17 LGPGAVYAALGLGLVLTYRASGVVNIAHGAFAMYATYQYAELREVGDLVLPVVGLPPRIH 76 Query: 102 -----ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 G + + + + + + + Sbjct: 77 LTDTPTFGLALSVSLAMAALLALASYLLVFRPLRRAQPMMTVVAAVGLTIALQAVAVVQF 136 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++ V + + +A + R T A R + D+ Sbjct: 137 GSDNRFLAPVLAQSPLHLLGVTVPSDRLLLAGLVVVAAAGLWAMSRWTMFGLATRAVADD 196 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L + + + +++ +AG A + I+ +LG Sbjct: 197 AETTALLGRRPGWIAATNWMLAAVLAALAGILVAP--ISALNPTSYSLFVVPAIAAALLG 254 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 G++S L + + L V Sbjct: 255 GLSSFGLTVAGALGLGVAQGFLLPLQQDVGWLNQPGLRALLPMILVLAVAG 305 >gi|121611025|ref|YP_998832.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121555665|gb|ABM59814.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 325 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 120/307 (39%), Gaps = 26/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Q +IY +FA G+ +++ GL+S + + Y ++ + + IPV Sbjct: 29 LLGVLTQAVIYAIFALGVGVLLRQSGLVSFGHALFFGAAGYGMGVVLALDWMPAEAAIPV 88 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G ++GL ++ G + TL + ++ + + + +T G G+ + Sbjct: 89 VLLAIGVLAFLIGLVIVRVPGIAFGMLTLAIGQMAYLLAFRARGLTGGADGMGIHWPAT- 147 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + S ++ ++ + L+ ++L++ RT IRDN++ Sbjct: 148 ----------LFGYSQSALLKPATVFLIAWVSMVLTTVLLLFILRTRFGAITEAIRDNEE 197 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + +A+S+ G+AG + + +SP+ +S + I + +VI+GG Sbjct: 198 RARFIGIGTTAPRAAVYALSAVVAGIAGILSSLNTGFVSPENLHWSVSAITLLMVIVGGF 257 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L+ + + +L G + L AL VI+ H Sbjct: 258 EKLAGPIIGAIVYVMFKDLLGGYATH---------------SMALFGAALIAVIVFSPHG 302 Query: 339 LLRLRTP 345 + Sbjct: 303 IAGALER 309 >gi|312793573|ref|YP_004026496.1| inner-membrane translocator [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180713|gb|ADQ40883.1| inner-membrane translocator [Caldicellulosiruptor kristjanssonii 177R1B] Length = 294 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 90/289 (31%), Gaps = 10/289 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + + G ++V G + L++ + +GAY + + L + + + Sbjct: 8 LINGITLGSVYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAYLSVTYLKLGLIPSLIL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S GM++ + K + I+ LI + +L I G + Sbjct: 68 SMTFCSVLGMLIEKFAYKPLRNSPRISALITAIGVSLLLENLMQIIMGADSRVFPRLVDE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +++ + ++L ++T I A R + + Sbjct: 128 KNYHLLQGRIVVNNKQIYLLIITILLMIILNFVV---------KKTKIGKAMRAVSQDMD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG + I+P M + + GG+ Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + L + L G + + F + + Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 286 >gi|228927030|ref|ZP_04090096.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228933267|ref|ZP_04096123.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229121516|ref|ZP_04250743.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus 95/8201] gi|228661980|gb|EEL17593.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus 95/8201] gi|228826428|gb|EEM72205.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228832765|gb|EEM78336.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 317 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 128/322 (39%), Gaps = 31/322 (9%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L+ + + + QI I+ +FA +++G G++S + + IGAY + Sbjct: 2 LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61 Query: 84 LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + KW Sbjct: 62 LFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T+G G F YYV L + ++ Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +++I + I N++ +L ++ K+ A V+ ++G F + ++ + Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVNTTV 222 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + + + ++GG+ +L + + Y+ S L + R Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 T ++ + +V+L+ L+ Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295 >gi|229820690|ref|YP_002882216.1| inner-membrane translocator [Beutenbergia cavernae DSM 12333] gi|229566603|gb|ACQ80454.1| inner-membrane translocator [Beutenbergia cavernae DSM 12333] Length = 492 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 83/306 (27%), Gaps = 24/306 (7%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 S + L+ + + GLS++ G+ GL + + +G I +GLS++L V+ Sbjct: 209 LSGLVFGLLLALASVGLSLIYGTTGLSNFSHGELVTLGGIVAYIAAQWWGLSLFLAGLVA 268 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ G T M + + G Sbjct: 269 VVVGAIMGYAQNAVLWAPLRRRGVGITQQMIVTIGLAVALQYALHLIVGGNP-------- 320 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 S V + + A++ L T + A R + DN Sbjct: 321 --LRISTANPPIIDLGPVRITQTSAISVGIAVVVLAAMAYVLLATRVGRATRAVSDNPAL 378 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + + +A + G + + + +++ + V LGG+ Sbjct: 379 ASASGIDVESIVRGVWVTGAALAALGGTLLGLYLN-ATRWNTGTTLLLLMFAAVTLGGLG 437 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + + + VVEL + + R + Sbjct: 438 AAMGALVGSIAIGLVVELSTLVLPSDMRYASALVILILVLL-------------FRPQGI 484 Query: 340 LRLRTP 345 L Sbjct: 485 LGRAER 490 >gi|91789191|ref|YP_550143.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91698416|gb|ABE45245.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Polaromonas sp. JS666] Length = 309 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 101/308 (32%), Gaps = 8/308 (2%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +YI + + +IY M A G ++ G L ++ + +GA++ + S ++I L Sbjct: 5 SQYIFNGLMLGVIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFA-GLTVSIVMMNIGLA 63 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 P +++ + L I L + +L T + + + Sbjct: 64 SPALQLLAVVVFAVAVTGLLGAGIAKFLILPLRHAPPLNTLLATLMLGTVMREAVRLFYP 123 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 +L+ + I +L A + L + RT + A R + Sbjct: 124 DGSNPKPFPALLPTSMVELGGLSLRIDNLILLASGLLAIAGVHLLITRTKLGMAIRAVAQ 183 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + L FA+ S +AG + ++ ++ +I + IL Sbjct: 184 DGETARLMGINFEAVVLITFALGSGLAALAGVMNGLYYNEVNFNV-GLLLGVIGFAAAIL 242 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ + + + M + + A+ + + + Sbjct: 243 GGLGNIYGAIIGGFLFAALQVIGSAMLPTLIPDI------PSSYKDVFAFAAVIIFMAWK 296 Query: 336 SHSLLRLR 343 L+ + Sbjct: 297 PTGLIAEK 304 >gi|75906691|ref|YP_320987.1| inner-membrane translocator [Anabaena variabilis ATCC 29413] gi|75700416|gb|ABA20092.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Anabaena variabilis ATCC 29413] Length = 316 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 102/319 (31%), Gaps = 31/319 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--------------VIL 84 + + +Y +FA G ++V LG+++L + +GAY Sbjct: 10 LLNGLSIGSVYAIFALGYTLVYSILGIINLAHGAIFTLGAYFTYALMGGTFGFNGLLANA 69 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 L + + + + ++G G+ M + + + L + ++ I Sbjct: 70 TLPIQLPFAVALIIGSSLAGLVGVAMERIAFQPLRKKGSDTLLTVVSSLGVAVVIVNIIQ 129 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G F + + + A + ++ T Sbjct: 130 YLVGAESYTFPANTFGN--LPPAFNFGTLEKPIPIRSVQVVIFTVSVVIVAILTYFINCT 187 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A + I ++ L + F +SS G+AG A+S I+ F Sbjct: 188 KYGKAIQAIAEDATTASLLGINSDRFIVLTFFISSFLAGLAGTLVASSV-SIAGPYFGIG 246 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + +++++LGG+ S+ ++ V L ++ + Sbjct: 247 FGLRGLAVIVLGGLGSIPGAVLGGLLIGVVEALV--------------PSDYSGYKDAVA 292 Query: 325 VIALFLVILMRSHSLLRLR 343 LF+++L+R LL R Sbjct: 293 FGILFIMLLVRPQGLLGRR 311 >gi|242241265|ref|YP_002989446.1| branched-chain amino acid transporter permease subunit LivH [Dickeya dadantii Ech703] gi|242133322|gb|ACS87624.1| inner-membrane translocator [Dickeya dadantii Ech703] Length = 308 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 99/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y I+ + + Sbjct: 12 MFNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +IS A G + + K D + LI + L + +T G Sbjct: 72 LIGTAFIAAVVISSAYGWSIERVAYKPVRDSKRLIALISAIGMSIFLQNYVSLTQGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + ++ + + ++ L++R + + A Sbjct: 129 ----RDVALPSLIQGQWVLGESNGFAATITTMQLTIWVVTFLAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L + F + + +AG I+P F + Sbjct: 185 RACSEDLKMTSLLGISTDRVISLTFIIGATMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L L + ++ F L + Sbjct: 244 TAAVLGGIGSIPGAMIGGLVLGITEALTSAYLSTEYKDVVSF-------------ALLIV 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|199599626|ref|ZP_03213006.1| Branched-chain amino acid ABC-type transport system, permease component [Lactobacillus rhamnosus HN001] gi|258507309|ref|YP_003170060.1| branched-chain amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|258538491|ref|YP_003172990.1| branched-chain amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|199589481|gb|EDY97607.1| Branched-chain amino acid ABC-type transport system, permease component [Lactobacillus rhamnosus HN001] gi|257147236|emb|CAR86209.1| ABC transporter, branched-chain amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|257150167|emb|CAR89139.1| ABC transporter, branched-chain amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] gi|259648666|dbj|BAI40828.1| branched-chain amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 292 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 89/288 (30%), Gaps = 12/288 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G + L++ Y +GA+ + + Sbjct: 8 IINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYAINYLHFGFVTALLS 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ G+++ + + + IA LI + L G Sbjct: 68 AMLMASLSGVLIEYLAYRPLRNSPRIAALITAIGVSFFLENGMSFLFGAN---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I + V +L L + +++T + A R + + + Sbjct: 118 -ARNFPQVIATKTYHLGGVDISNVQLLILFTSLVLMILLQFIIKKTTMGKAMRAVAVDPQ 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + FA+ SA G AG + I P M I ++GG+ Sbjct: 177 AAQLVGINPDHVISFTFALGSALAGAAGVMIGLYYNSIDPLM-GMVPGIKAFVAAVVGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 S+ A ++ + + + + + + Sbjct: 236 GSIPGAAIGGFLIGLLETGVQAIGLSAYKDAAVYLVLILVLVVLPAGL 283 >gi|311103937|ref|YP_003976790.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310758626|gb|ADP14075.1| inner-membrane translocator 14 [Achromobacter xylosoxidans A8] Length = 321 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 118/326 (36%), Gaps = 32/326 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ LL+ L Q +++L + +FA +++ G GL+S + Y Sbjct: 10 ILALLLVPALLVPFFPQIVYPVFVMKVLCFALFALAFNLLTGFTGLVSFGHAAFFGWAGY 69 Query: 80 SYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + + +G + + ++ A G +G +++ G Y A+ TL +S++ + Sbjct: 70 AAGEMMILFGARGLPPEIAMACGVAMAAAIGYAIGWLAIRRTGIYFAMITLALSQVAYFM 129 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ ++ + R + + MYY LG+ L Sbjct: 130 AVQVGWTRG--------------EDGMQGIPRGKFLGLVDLSVDANMYYFALGVFVLGFL 175 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + + +TIRDN SL KL AF +S+A G+AG+ A + Sbjct: 176 FVYRVIHSPFGQVLKTIRDNAPRAISLGYDTDRCKLLAFVLSAAVAGLAGSLKALVLQLV 235 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + + V+ + +LGG+ ++ +++ + + Sbjct: 236 ALNDVSLATSTEVLLMTLLGGIGTVWGPVVGATLVVSLQNYLATLGDVV----------- 284 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 T ++ + L + + Sbjct: 285 ----TIVIGLIFVLCVSFFRRGFVGE 306 >gi|325962598|ref|YP_004240504.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323468685|gb|ADX72370.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 322 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 118/294 (40%), Gaps = 6/294 (2%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + G GLL+ A+GAY + I +G+ ++ + ++ + S +++G+P+L+ Sbjct: 31 VHFGYSGLLNFGQAGFMAVGAYGFAISTLTFGVPFFVGLLIAVIASAIFALLLGIPTLRL 90 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 R DYLAI T+ +EI + I+ + + + +A + ++ Sbjct: 91 RADYLAIVTIAAAEIVRYIVTTNQLTSVTGSANGLAAFEGGFYAMNPFPEGSYFGMNNRD 150 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + + + L+ +C ++ R+ + IR+++ A SL + K+ A + Sbjct: 151 FFIRVVGWALVALCCTLVWLL---MRSPWGRVLKGIREDENAVRSLGKNVYAYKMQALII 207 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 +AG F R + P + + + ++LGG+ ++ I V+ L Sbjct: 208 GGVLGALAGMVFTLPRGAVQPANYGTELTFFLYTCLLLGGLGTVLGPVIGAMIFWVVLSL 267 Query: 298 CCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 G+ + S L+ +AL L+++ R + + F Sbjct: 268 TQGVLYGLIESGAITWLNTVQAGQLRYILVGVALMLLMIFRPQGVFGNKKELAF 321 >gi|152986147|ref|YP_001350901.1| branched-chain amino acid ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150961305|gb|ABR83330.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas aeruginosa PA7] Length = 529 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 87/295 (29%), Gaps = 31/295 (10%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLP 113 I G LG++++ +GAYS ++ + L ++ ++ +G+ Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYSTYVVQLLLQRLAPEWLALYPLLALPVAFCVSAAIGMA 315 Query: 114 SLKFRGDYLAIAT---LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 + +L L+ + +LI+ + G + VA+ + Sbjct: 316 LERTVIRHLYGRPLETLLATWGISLVLIQLVRVLFGAQNVEVANPA---------WLSGG 366 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 ++ ++ F+ L L RT + R + N+ Sbjct: 367 IQVLPNLVLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRV 426 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 + AF + S G+ G A S+ I +V+LGG+ L+ A Sbjct: 427 DMLAFGLGSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFG 484 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L ++ +L R L L+ Sbjct: 485 LGVANKVLEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|148256624|ref|YP_001241209.1| high-affinity branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146408797|gb|ABQ37303.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 305 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 101/312 (32%), Gaps = 28/312 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90 + + + IY + A G ++V G +G+++ + IG + +I + + Sbjct: 8 LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDVFMIGGFIALISFLVLVSVGLTAVPV 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ VS I+ G + + + +A ++ + +L + ++ G Sbjct: 68 ILLIVLLVSMAITALYGWTIERIAYRPLRHSFRLAPMLSAIGMSFVLTNFSQVSQGARVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V + T F S+ I + VLLG + RT + Sbjct: 128 PVPPIVTGGYTLHEGESGFVVQLSNIQIVVVITTIVLLG------LFTWLVSRTRLGRDM 181 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +Q L + F + +A +AG + + M F I Sbjct: 182 RACEQDQTMAALLGVDVDRTISMTFVIGAALAAVAGMMYLLYYGLVDFFM-GFVAGIKAF 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL + + + + F L + Sbjct: 241 TAAVLGGIGSLPGAMLGGLAIGLIETFWSAYFSVEYKDVAAFS-------------ILIV 287 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 288 VLIFMPTGLLGR 299 >gi|114319352|ref|YP_741035.1| inner-membrane translocator [Alkalilimnicola ehrlichii MLHE-1] gi|114225746|gb|ABI55545.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Alkalilimnicola ehrlichii MLHE-1] Length = 364 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 101/340 (29%), Gaps = 28/340 (8%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 + ++ ++ + L + A L ++ G G+LSL +A+G Y+ + Sbjct: 38 VVPPDSFFYMPNWMVTLLGRFLCLALVALALDLIWGYTGILSLGHGAFFAVGGYAMGMHL 97 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 +R + + + P F L + + ++ Sbjct: 98 TRNTYEEGSVPNFIQFLGMSDWPWFWAPFEYFWATALLVVLAPGLLALVFGFLAFRSRVR 157 Query: 146 GKAGIYVADRLYF--------------LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 G + L F T + + F + +Y + + Sbjct: 158 GVYFAIITQALTFALMLLFFRTETGLGGDTGLTNFQEVLGFSLRSNDARLTLYLLSGVVL 217 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ + ++ + + IRD + + KL + S+ G+AGA + Sbjct: 218 ILAYLLCRFIVTSKLGRVLTAIRDAESRVRFTGYNPLRYKLFVWTFSAMLCGLAGALYVP 277 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 I+P + +I + V LGG +L I+ G Sbjct: 278 QTGVINPGEMAPAVSIEMAVWVALGGRGTLVGALAGAGIVNGAKSW-------------- 323 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 F ++ + LV L ++ L +R Sbjct: 324 FTAAYPELWLFFLGALFILVTLFLPRGVVGLFDRLRKEKR 363 >gi|77465298|ref|YP_354801.1| ABC branched-chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77389716|gb|ABA80900.1| ABC branched-chain amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 332 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 118/310 (38%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +G I + Sbjct: 45 FLMKLLCFALFAAAFNLLLGYTGLLSFGHATFFGGSAYFTAHAVKVWGWPPEFGILLGVA 104 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + A G++MG+ +++ +G Y A+ TL +S++F ++ Sbjct: 105 GAAALGLLMGVIAIRRQGIYFAMITLALSQMFFFFCLQAAFTHG--------------ED 150 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MY+ +LG L I + + IR+N+ Sbjct: 151 GIQSVPRGHLFGVIDLSNATNMYFFVLGTFTLGMLAIWRFVNSPFGMILKAIRENEPRAI 210 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AG A + + + VI + +LGG+ +L Sbjct: 211 SLGYSVAEYKLGAFVMSAALAGLAGGVKALVFQFATLTDVGWQMSGEVILMTLLGGIGTL 270 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +A+++ + F T + + +L+ ++ Sbjct: 271 VGPVVGSALVVTLQNYLATSQFPV---------------TIITGLVFMACVLLFRRGIVG 315 Query: 342 LRTPSNFLER 351 S R Sbjct: 316 EFYASRLGRR 325 >gi|255261922|ref|ZP_05341264.1| hydrophobic amino acid ABC transporter [Thalassiobium sp. R2A62] gi|255104257|gb|EET46931.1| hydrophobic amino acid ABC transporter [Thalassiobium sp. R2A62] Length = 316 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 93/323 (28%), Gaps = 16/323 (4%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR- 87 G Y+ + IY + A G+++ G L + +GAY + + Sbjct: 4 AFGFEFVNFYLIPGLVLGCIYALGAIGITLTFGILRFANFAHGELMMMGAYLTWTIMAII 63 Query: 88 -----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + ++++ K I ++ S IL Sbjct: 64 TAVIGITVHPLIAAIPASIVVIYLFFWTDKFFYKPFRKADTIKVVMASFGMMLILRSAVQ 123 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + G + + + S + ++ + G + L Sbjct: 124 VIWGPNQLTFVPGIAKPNAGLMSWTDDIG---AILLIPNKHLLIFAGTIVFVVVLSYILN 180 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 RT I A R + D+ + + + V AG F A + M Sbjct: 181 RTRIGKAMRAVSDSPDLAHVTGIDVDQVIRATWIVGGVCALAAGVFLAMDIQLLETTM-G 239 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F + + + ILGG+ I+ EL + + T Sbjct: 240 FRMLLPMFAAAILGGIGKPYGAVAGGLIIGLAEEL------SAYPWIGTEPLLSPGYKTG 293 Query: 323 LMVIALFLVILMRSHSLLRLRTP 345 + + +++++R L + R+ Sbjct: 294 VAFAIMVVMLILRPQGLFKGRSF 316 >gi|288574273|ref|ZP_06392630.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570014|gb|EFC91571.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] Length = 288 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 105/305 (34%), Gaps = 25/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + + GL++V G LG+L + Y GAY I +IWL I V Sbjct: 8 LLNGLATGATYALISLGLALVYGVLGVLHVAHAGVYMAGAYI-GIGVYSVTGNIWLAIIV 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G G+ + Y LI S + + + G + Sbjct: 67 SMIVCGFIGVAIERLVYFPLLKYPPYVPLISSIAIFTGMEELVRLVAGPS---------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + F F + + + + + + +T A R + Sbjct: 117 -VQTFSLELPFPSFDLGGIHVSSNLMGIYVITAVVFFILWFITTKTETGLAMRAASQDMP 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ F +F VSSA +AG + +SPDM ++++++GG+ Sbjct: 176 IAGAMGIDSRFMVDFSFFVSSAVAALAGILVGIYYNTVSPDM-GAIPAYKALALIVVGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A+ L L G + L IA+ +V++ R Sbjct: 235 GSVPGAVVASLSLGVAETLLIGYAG------------IPLPRDALAFIAMIVVLMWRPQG 282 Query: 339 LLRLR 343 LL R Sbjct: 283 LLGKR 287 >gi|330817551|ref|YP_004361256.1| inner-membrane translocator [Burkholderia gladioli BSR3] gi|327369944|gb|AEA61300.1| inner-membrane translocator [Burkholderia gladioli BSR3] Length = 392 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 96/365 (26%), Gaps = 36/365 (9%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L + +V +L + + + ++ + L Y A GL I G G+LS Sbjct: 29 LARRADASGYAGIVLLAILIVVVFPLALDAFRLNLMGKYLTYAFVAVGLVIAWGYGGVLS 88 Query: 68 LNCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 L + + +G Y+ + + A Sbjct: 89 LGQGVFFGLGGYAMAMFLKLESSDPVSTRTQTTPGIPDFMDWNQLTALPAWWKPFHSLPF 148 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRS 165 + L F + + I + Sbjct: 149 SILAVLVVPTLLAFVVGFAMFKRRVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITD 208 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 L + + +Y+V + + W++R + +RD + Sbjct: 209 LRTLLGWNIQGNSAKYVLYFVNAALLIGAMLACRWIQRGKVGTLLLAMRDKEDRVRFSGY 268 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + K+ AF V++ + GA F +SP +I ++ +GG S+ Sbjct: 269 DVAMFKVFAFCVAAMLAAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMSVVGAV 328 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 T ++ F SF LM V++ + L L Sbjct: 329 VGTILVNLGKTW--------------FSESFPNLWLYLMAAMFIGVVMAFPNGLAGLYEA 374 Query: 346 SNFLE 350 Sbjct: 375 HLRAR 379 >gi|320353686|ref|YP_004195025.1| HAAT family amino acid/amide ABC transporter membrane protein 1 [Desulfobulbus propionicus DSM 2032] gi|320122188|gb|ADW17734.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Desulfobulbus propionicus DSM 2032] Length = 300 Score = 79.1 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 98/303 (32%), Gaps = 17/303 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S + IY + A G ++V G +GL++ Y IGA++ +I + + L +P+ Sbjct: 8 LFSGLTRGSIYALIALGYTMVYGIIGLINFAHGEIYMIGAFTALIASTVFS---ILGLPL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A++ + + + + LI ++ + + Sbjct: 65 PAILVLTALAAVVWAGAYGYTVERLAYRPLRNAPRLSPLISAIGMSIFLQNYVLLAQTSD 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F I +L+ + + + ++ T A R ++ Sbjct: 125 FLPFPALIPDFALLEPYAAIIGSTDLAILVVSAVVMLFLTVLIKCTRTGKAMRATAQDRT 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + SA + G A+ +I+ F I + +LGG+ Sbjct: 185 MALLVGINVDRIISITFVLGSALAAIGGLLIASHIGQINF-SIGFLAGIKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + +L G + + F L L+++ R Sbjct: 244 GSIPGAVLGSFVLGLTEAFATGYVSSDYEDVFAFS-------------LLVLILIFRPAG 290 Query: 339 LLR 341 LL Sbjct: 291 LLG 293 >gi|256830268|ref|YP_003158996.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256579444|gb|ACU90580.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 302 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 91/303 (30%), Gaps = 17/303 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A G ++V G + L++ Y +GA+ +I+ S G+ + + Sbjct: 10 FLGGLTRGSIYALIAIGYTMVYGIIELINFAHGEVYMLGAFVGLIIASVLGIMGFPAPAI 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + LI ++ + + Sbjct: 70 LVIAAVVAIIYCAGYGYSMEKIAYKPLRGAGRLSP---LISAIGMSLFLQNYIILAQTSD 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R + F ++ + +++ F A + +++ T + A R N+K Sbjct: 127 FLPFPRLIPDFDFIEPIAHVFGSSDFVIVVTSAFSMAGLTAFIKYTKMGKAMRATAQNRK 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + S+ + G A+ ++ F I + +LGG+ Sbjct: 187 MAMLLGVDADKVISITFILGSSLAALGGVLIASHVGMVNF-AIGFLAGIKAFTAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ L G + + F L + ++ R Sbjct: 246 GSIPGAMLGGLFLGLSESFATGYISSDYEDVFAFT-------------LLVVFLIFRPSG 292 Query: 339 LLR 341 ++ Sbjct: 293 IMG 295 >gi|325846991|ref|ZP_08169817.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480963|gb|EGC84008.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 295 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 101/303 (33%), Gaps = 21/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A G ++V G L++ +GAY+ + L + + Sbjct: 7 FFNGLQLGSIYALIALGYTMVYGVAKLINFAHGDIIMVGAYTIFFVVQTSLFKSGLPLYL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + + ++G+ + L ++ I I + + Sbjct: 67 SIIPAIIACTLLGVVIERVAYKPLRNSSSISILITAIGVSLFLE-------NLFVKFFTA 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V SL + + + ++ L+ + +++ +T + ++ K Sbjct: 120 NAKPVPSLFKQASLNIFGISLSFQTIFTIVLTIILTIILQIFISKTKYGKMMLAVSEDYK 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G+A + +S +I+P M I + ++GG+ Sbjct: 180 ASSLVGINVDNTMTMTFAIGSALAGVASLLYVSSYPQITPFM-GSMLGIKAFTAAVVGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL + + + ++ + L +V++++ Sbjct: 239 GSIPGAVIGGFILGMIEVMTRAYLSSSYADA-------------IVFMVLIVVLIVKPTG 285 Query: 339 LLR 341 + Sbjct: 286 IFG 288 >gi|55380244|ref|YP_138093.1| high-affinity branched-chain amino acid transport protein [Haloarcula marismortui ATCC 43049] gi|55232969|gb|AAV48387.1| high-affinity branched-chain amino acid transport protein [Haloarcula marismortui ATCC 43049] Length = 435 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 69/391 (17%), Positives = 132/391 (33%), Gaps = 60/391 (15%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + + L + + + IY M A L++ G GL +L Sbjct: 27 LAIGGLYALFSVVLGFQLNGTVNTLRRVAFLSAIYAMLALALNLQWGYAGLFNLGAAGFM 86 Query: 75 AIGAYSYVILGSR-------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 AIG Y+ IL + +GL + + I + +++G G + LP+++ R DYLAI T+ Sbjct: 87 AIGVYTMGILTAPVTASPPGFGLPLPVAIVGAILVTGIIGGLAALPAIRLRADYLAIVTV 146 Query: 128 IMSEIFQNILIKWKPIT----------NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF- 176 SEI + L + G G+ + + + Sbjct: 147 AFSEIVRLTLRAPEFANTRIAGVAFGTGGATGLSLPSNPIRILFYTDPATTAPAPNALGA 206 Query: 177 --------------VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ VL L +++ + ++ ++IR++Q+ + Sbjct: 207 AIFSAVEPLGIEETLVIGWAYVIVLCLCLGLLYCLMIRIGKSPFGRVLKSIREDQQVTQA 266 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L K+ FA+ A +G+ F+ S SP MFK + + + +GG S + Sbjct: 267 LGKDTRLFKIKTFALGCALMGLIAIFWRLSGGYASPRMFKPIQTFYIFIALFIGGTGSPT 326 Query: 283 KIAKATAI----------------------------LIGVVELCCGMNFYYFNSLLKFDC 314 A+ L+ + ++ + D Sbjct: 327 GSIVGGALFASLLFEGPSFIRRVVAEYLQLSNAPDTLVSALAELGTLDVTPLLAYSVQDV 386 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 S + L+ I L ++ LL R Sbjct: 387 SISALRLMLLGIVLVYLMQRHPDGLLGHRKA 417 >gi|325674006|ref|ZP_08153696.1| branched chain amino acid ABC superfamily ATP binding cassette transporter [Rhodococcus equi ATCC 33707] gi|325555271|gb|EGD24943.1| branched chain amino acid ABC superfamily ATP binding cassette transporter [Rhodococcus equi ATCC 33707] Length = 346 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 111/291 (38%), Gaps = 15/291 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + A + +++ L Y + Y + A G+ I G LS+ Sbjct: 27 IAIEAGITLVVVAAVLVWMGPSLYRQDLVFLAATYALIALGMYIPFVMAGSLSMAYSAYA 86 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AIGAY+ ++ + GLS+W + A+++ +I+ L + K G YLA TL+ F+ Sbjct: 87 AIGAYAVALVSVKTGLSMWWGWMIGALVAAVVAVILALATQKLSGFYLAAVTLLFGIAFE 146 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + LI T G AGI + + + + + + Sbjct: 147 HWLIDGPDFTGGSAGISGVEAVT---------------LFGWQPPRYTLVVMAILFVCAI 191 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A ++ +R++ R RDN+ A S + A A+ +A G+ F S Sbjct: 192 AVVVDRMRKSVWGLTLRAARDNKNAARSSGVNPAHLTVIALAIGAAIASTGGSLFTVSVQ 251 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 ++P+ F S + I + I+GG S I++ V G Sbjct: 252 AVTPETFTLSIVFLAIFMPIIGGRNSAWGAPLGALIVVIVTLNMPGYQGSG 302 >gi|225414533|ref|ZP_03761722.1| hypothetical protein CLOSTASPAR_05756 [Clostridium asparagiforme DSM 15981] gi|225041956|gb|EEG52202.1| hypothetical protein CLOSTASPAR_05756 [Clostridium asparagiforme DSM 15981] Length = 323 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 110/324 (33%), Gaps = 34/324 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + + + + + + +I+I ++A +++ G G+ S+ + + G Sbjct: 9 LWIGTAVFIVFAVLGALLSEVGITFLSRIVIMALYALSFNLMFGYAGMSSVGHALYFGFG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ ++ ++ + + +S + +G LK + T+ + Q +L Sbjct: 69 GYALMVYLTKLQVPLLPACILSVLTVIPVAWFLGTACLKNNMLTFSFLTMGLCTTVQLVL 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 K + G G ++ + +++ +L + A + Sbjct: 129 YKTAQL-GGTVGFTYYFLPSWMSGYRQ------------------LFFFILICAGICAVL 169 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I L ++ + IR+N + L + ++S F +S+ F +AG +A Sbjct: 170 IYLLVQSPYVQMLKGIRENDERMTFLGVNVRKMRVSIFVISAVFANIAGILYAFRNSGAY 229 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + ++ I + ++GG + + I+ + YY Sbjct: 230 TTSLDANVSMQAIMMCVVGGRSVFLGPVLGSVIITTIQNYLSVKTMYYEG---------- 279 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 ++ + + L LL Sbjct: 280 -----IIGVIIVLTAYYLREGLLG 298 >gi|284042127|ref|YP_003392467.1| inner-membrane translocator [Conexibacter woesei DSM 14684] gi|283946348|gb|ADB49092.1| inner-membrane translocator [Conexibacter woesei DSM 14684] Length = 338 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 106/337 (31%), Gaps = 25/337 (7%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 SLR + + + V L L G + + + + A GL++V G L Sbjct: 22 SLRPAQPVAVAVGVVVAIGLALIATKGLHDVAQTALNGLSFGAVVALGAVGLTLVFGILK 81 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L++ GAY GL + + + + ++ G+++ + A Sbjct: 82 LVNFAHGDFLTFGAYIAFAANVSLGLPLVVSVLAAMALTAVLGIVLERVMWGPTRERGAG 141 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 ++ + Y + R + + Sbjct: 142 MLQLLLMSIGAAFVI----------RYGIQFFAGTDVKSLDVDRTGVVELAGLRIGSTAL 191 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + + +I L LR T + R + DN++ + ++ + + A G+ Sbjct: 192 IAGVTGIVVVVAIGLLLRFTLLGKRMRAVADNRELAETTGIDTRRVIVTTWLFAGATAGL 251 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG FA + + + + + + VILG + A +L V E + Sbjct: 252 AGVLFALTTNV--KPELGYELLLPIFAAVILGSVGHAFGALVAGLLLGVVTEWSTLLVPA 309 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + F +AL L +++R L Sbjct: 310 NWKLSVGF-------------LALILALIVRPQGLFS 333 >gi|83749023|ref|ZP_00946030.1| LivM [Ralstonia solanacearum UW551] gi|207743087|ref|YP_002259479.1| amino acid transport system permease lipoprotein [Ralstonia solanacearum IPO1609] gi|83724286|gb|EAP71457.1| LivM [Ralstonia solanacearum UW551] gi|206594484|emb|CAQ61411.1| amino acid transport system permease lipoprotein [Ralstonia solanacearum IPO1609] Length = 440 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 110/333 (33%), Gaps = 17/333 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + L L+ + L + + ++ Q+ I ++FA ++++G G+LS Sbjct: 23 RPFNLARWLIWGSTALVMIVLPLIWPRGFAITLLSQMGIMIIFALSYNMLLGQSGMLSFG 82 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + +GA+ V L +R G + L I ++ +L Sbjct: 83 HAVYAGLGAFMAVHLLNRIGAAQALGIGGPLAVALLPLAGGLGGALFGVLFGYVTTRRAG 142 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + L + + + + D G + +YY++ Sbjct: 143 TTFSMITLGIGEMVF--ASALMFPDFFGGEGGVSTNRSIGEPLLGISFGPARQVYYLIAA 200 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 C +S +++ +T + +RDN + + + + +S+ F G+AGA Sbjct: 201 WCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYSTQRVRCLVVILSAFFAGIAGALS 260 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + + ++ + + V+ +GGM + + + G+ + Sbjct: 261 CINFEIVTAENVSAVRSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSGITKAW---- 316 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L+++ + L Sbjct: 317 -----------LLYLGLFFVLMVMYAPGGIASL 338 >gi|116748306|ref|YP_844993.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116697370|gb|ABK16558.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 287 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 99/304 (32%), Gaps = 22/304 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ + AY+ + + + L ++ P Sbjct: 6 LINGVSLGSLYALVAIGYTMVYGILRLINFAHGDLLMVAAYAAIYGVAIFALPWYVGFPT 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+GA G+++ + + + I+ LI + L + G F Sbjct: 66 AILITGAMGILLDRAAYRPLRNAPRISLLISAIGASFFLENVALVVIGGVPKAFPRPDMF 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ Y + L ++ + RT + A R + + Sbjct: 126 SAV----------IEAFGLRIQVLTIYTPIVTALLVLGLLYVVYRTRVGKAMRAASKDFE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + S G +A +++P M + +LGG+ Sbjct: 176 TTRLMGINLDRVISITFLLGSTLAAAGGIMWAMKYPQVNPLM-GVFPGLKAFIAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L L + + L LV+L R Sbjct: 235 GSIVGAVIGGFLLGLGEVLIVAALPGL-----------SQYRDAFAFVILILVLLFRPTG 283 Query: 339 LLRL 342 ++ Sbjct: 284 IMGE 287 >gi|225628462|ref|ZP_03786496.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella ceti str. Cudo] gi|225616308|gb|EEH13356.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella ceti str. Cudo] Length = 583 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 109/288 (37%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 37 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 96 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L G+ Sbjct: 97 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATITFP--GQTSFT 154 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 R + + +L + A ++ ++ + + +W Sbjct: 155 QVARPDLFASDRS------------------YFLFVLLAYGIIAVVLEFISHSRLGASWL 196 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 197 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 256 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 257 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 304 >gi|187477482|ref|YP_785506.1| ABC transporter permease [Bordetella avium 197N] gi|115422068|emb|CAJ48591.1| ABC transporter, permease protein [Bordetella avium 197N] Length = 327 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 117/301 (38%), Gaps = 16/301 (5%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKS-QKYIDSMGIQILIYVMFAWGLSIVVGSL 63 L L + D + L ++ L ++ + + + IY A +++++ Sbjct: 6 HLALYRKDGVWQWLLHGLAIVALLCWPIWTGQPRFYLHLAVMVSIYAALAMSMNLLLRI- 64 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G LSL + +GAY+ IL +G S ++ +++ + G ++ +G + A Sbjct: 65 GQLSLAHGALFGLGAYASAILSRDHGFSFPAAFIMAGVLTALVAALAGPVFMRIKGVHFA 124 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 + T + E I++ + G G + Sbjct: 125 LLTFALGEAIVLCFIEFHGLFGGNNGFGDIPPMSAGLPIPPGR--------------YGA 170 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y V + + + L R +++ N+ S ++ ++S F +S+A G Sbjct: 171 YLVAVSFALVVYFGLRLLYRREWGMVAASLQQNEALVTSGGLNVLSFRVSVFVLSAAIAG 230 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 AG+ +A + ISPD F F + + + +LGG+ +L+ +L+ + EL G+ Sbjct: 231 CAGSIYAHYQGYISPDAFGFWTAVNAVIMNVLGGVGALAGAVIGAVLLVPLPELLRGLQQ 290 Query: 304 Y 304 Y Sbjct: 291 Y 291 >gi|84502918|ref|ZP_01001031.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] gi|84388901|gb|EAQ01771.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] Length = 410 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 53/375 (14%), Positives = 108/375 (28%), Gaps = 37/375 (9%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFL--FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 F LR L LLA+ + + G + L + A + +V G Sbjct: 6 FILRNPSILIFLALLAIFTAAVTLMSEAFGTAMISTSFVKTLGKTLCLCLVALAMDLVWG 65 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISG 104 G+LSL + +G Y + I + ++ + Sbjct: 66 YCGILSLGHFAFFGLGGYMIGMWLMYARTEIIVTESLANAAIPPTDQEIVDAIGTQIFGV 125 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY------------- 151 L + +++ ++ W + G+Y Sbjct: 126 VGSSDFPPIWAFAHSLPLQLLMVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALS 185 Query: 152 ----VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 + + L +S + ++ + L + W+ Sbjct: 186 LYLFQNESGLRGNNGLSGLQNLPGVAASQAVVSVWFLWASALALGLGYLLCAWVVSGKFG 245 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 + R IRD++ L ++ KL F +++ G+AGA + I+P +I Sbjct: 246 SVVRGIRDDEARVRFLGYSVEGYKLFIFTLTAIIAGIAGALYYPQAGIINPGEVAPIASI 305 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + V +GG L A++ + G + + L+ ++ Sbjct: 306 YLAVWVAIGGRGRLYGAVIGAALVSLISTWFTGGLVPSVPLGF-YTIDWVDWWLVLLGLS 364 Query: 328 LFLVILMRSHSLLRL 342 LV L + L Sbjct: 365 FVLVTLFAPKGIGGL 379 >gi|332529316|ref|ZP_08405278.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332041233|gb|EGI77597.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 365 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 107/293 (36%), Gaps = 7/293 (2%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-- 88 ++ ++LI++ +++G G++S + + IGAY I +R Sbjct: 31 PFLVPGVKALNVAAKVLIFIALVASFDLLLGYTGIVSFAHTMFFGIGAYGVAIAFTRLGA 90 Query: 89 -GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 ++ + + +S +++GL SL+ + + A+ TL ++ F + + +T G+ Sbjct: 91 NWTALATGVASALAVSLLLSLLIGLFSLRVKAIFYAMITLAVASAFLTLASQLSDLTGGE 150 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ + V I YY++ L +L + + Sbjct: 151 DGLTFRVPQL---LMPGFRLFEQDVLGVAVNGRIVTYYLIFLTVVLMFLALLRIVNSPFG 207 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSEN 266 + IR+N +L + + + +S+ F +AG A F Sbjct: 208 RVLQAIRENDFRAEALGYRTVVYRTLSNVISAGFATLAGCLLALWLRYNGPDTSLSFEIM 267 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + ++ IV++GGM +L + + + + ++ + + Sbjct: 268 LDILLIVVIGGMGTLYGAILGSTLFLLAQSYLQDVLKLLGAAMEGWPLLPAIF 320 >gi|312795636|ref|YP_004028558.1| branched-chain amino acid transport ATP-binding protein livG [Burkholderia rhizoxinica HKI 454] gi|312167411|emb|CBW74414.1| Branched-chain amino acid transport ATP-binding protein livG [Burkholderia rhizoxinica HKI 454] Length = 754 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 101/292 (34%), Gaps = 27/292 (9%) Query: 50 VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109 ++FA +++G GLLS + Y IGA + + + + LS L V + + Sbjct: 59 IVFALSYDLLLGQTGLLSFGHAMYYGIGALAAARVANAWALSAPWLPVVGGAGAALVAVP 118 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 G S + G A+ TL + E+ G G+ + Sbjct: 119 AGWLSARRGGVTFAMVTLGLGELVATAASTVPEWFGGVGGVMI------------DRGAV 166 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + Y +++ + S +I WL RT + + +RDN + + Sbjct: 167 PGWLGIDFGATRAAYGLVVVVALASCMLIAWLLRTPLVHVANAVRDNPRRAAFVGVDPSR 226 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + + +++ F G+AGA + + + D + + V++GG + + Sbjct: 227 VRWAMTVIAAFFAGVAGALSVVTFEIATADNASVATCATALIAVVIGGTGTFAGPILGAV 286 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + + + + + LV+++ L+ Sbjct: 287 VYVSIANGLASITRAWP---------------MYVGLFFLLVVVLAPGGLIG 323 >gi|187928538|ref|YP_001899025.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|187725428|gb|ACD26593.1| inner-membrane translocator [Ralstonia pickettii 12J] Length = 444 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 112/338 (33%), Gaps = 8/338 (2%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + L ++ + L+ + L Q + ++ Q+ I ++FA ++++ Sbjct: 24 MKFKPVNLARW------MLWGTTALVMIVLPLIWPQGFAITLLSQMGIMIIFALSYNMLL 77 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G+LS + +GA+ V L + + + + ++ A I G G Sbjct: 78 GQSGMLSFGHAVYAGLGAFMAVHLLN--KIGAVQALGIGGPLAVALLPIAGGLGGALFGV 135 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 T S ++ + + D G + Sbjct: 136 IFGYVTTKKSGTTFAMITLGIGEMVFASALMFPDFFGGEGGVSTNRSIGDALAGITFGPA 195 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 +YY++ C +S +++ +T + +RDN + + + +S+ Sbjct: 196 RQVYYLIAAWCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRFLVVILSAF 255 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G+AGA + + ++ + + V+ +GGM S + + G Sbjct: 256 FAGIAGALSCINFEIVTAENVSAVRSGSVLLAAFIGGMGSFFGPIIGAVLTVFFTVALSG 315 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + L F M + L + + + Sbjct: 316 ITKAWLLYLGLFFVLMVMYAPGGIASLLVIHLPILRRG 353 >gi|91784480|ref|YP_559686.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91688434|gb|ABE31634.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 428 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 115/331 (34%), Gaps = 28/331 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGAT-KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + +LA L+LFL + Q ++ + Q ++FA ++++G GLLS Sbjct: 16 RALWRVLAPWLALILFLGVPPFVWPQSWLLAYLAQTAAMIVFALSYNLLLGETGLLSFGH 75 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +GA L +R G+ + LL V + CG++ G S + G A+ TL + Sbjct: 76 AAYSGLGALVAAQLFNRIGVPLVLLPLVGGIGGALCGVLFGFISTRRAGTAFAMITLGLG 135 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 E+ G+AG+ + ++ Y ++ Sbjct: 136 ELVAAAAWTLPDWFGGEAGVAI------------DRASGAQWAGWSFGPAREAYALIAVW 183 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 C L+ + + L RT +RDN ++ + VS+ F G++G Sbjct: 184 CLLACAALFALSRTPFMRLANAVRDNPVRAAAIGCYPRRIRYGVVVVSAFFAGISGTLAL 243 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + +S + + V+ ++GG + +L + + Sbjct: 244 INVELVSTESVGMMRSGAVLIATVIGGTAAFFGPVAGAVVLTFFSVAVASVTRAW----- 298 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + +V++M L Sbjct: 299 ----------LFYLGLFFIVVVVMSPDGLAG 319 >gi|163854602|ref|YP_001628900.1| branched chain amino acid ABC transporter permease [Bordetella petrii DSM 12804] gi|163258330|emb|CAP40629.1| Branched-chain amino acid transport system, permease component [Bordetella petrii] Length = 373 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 101/344 (29%), Gaps = 32/344 (9%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 +F A Y ++ + + Y + A L +V G G+LSL + +A+G Y++ + Sbjct: 40 VFPPGHALHVSAYAVALLGKFMCYALAALALDLVWGYAGILSLGHGLFFALGGYAHGMYL 99 Query: 86 S---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 W P + M L L G Sbjct: 100 MRAIGRDGVYQSDVPDFMVFLNWKAYPWYWAFTDHFWYAMLLVVLVPGGLAFLFGYFAFR 159 Query: 131 EIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +I + D + R F + +Y+V Sbjct: 160 SRIKGVYFSIITQALTFAAMLLFFRNDTGFGGNNGFTDFKRILGFDITAPATRAGLYWVT 219 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + F + + + ++ + +RD + + + KL + +S+ G+AGA Sbjct: 220 LAVLFGALVLARAVTQSKLGRVLTAVRDAESRLRFIGYEPLGFKLFVWTLSAVMCGVAGA 279 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + I+P +I ++ V GG +L + G+ Sbjct: 280 LYVPQVGIINPGEMSTENSIEMVIWVATGGRGTLIGPIIGAGAVNGLKTW---------- 329 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 F F + + LV L+ ++ L Sbjct: 330 ----FTSVFPEFWLYALGLIFVLVTLLLPQGIVGLVRRWMARRE 369 >gi|108799256|ref|YP_639453.1| inner-membrane translocator [Mycobacterium sp. MCS] gi|119868372|ref|YP_938324.1| inner-membrane translocator [Mycobacterium sp. KMS] gi|108769675|gb|ABG08397.1| urea ABC transporter membrane protein [Mycobacterium sp. MCS] gi|119694461|gb|ABL91534.1| urea ABC transporter membrane protein [Mycobacterium sp. KMS] Length = 367 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 107/357 (29%), Gaps = 35/357 (9%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M F R + +++ + + + + + L + + A G+ + Sbjct: 1 MRTFVGRWQTWAGFGVAALLLFAVAPAVL------SDFRLGLLGKFLCFAIVAVGIGLAW 54 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---------------WLLIPVSAMISGA 105 G G+L L + + +G Y + + L + S A Sbjct: 55 GRGGMLVLGQGVFFGLGGYMMGMHLKISDAQLRGDDVPDFMQIAGVRELPGYWAPFASPA 114 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 ++ + L I + + A + V + + Sbjct: 115 FTLLAIVVIPTGIAAVLGFGVFKRRVKGAYFAILSQALAAALAILLVGQTGLGGSNGLTN 174 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 FF F + + + +Y++ + + +++ L ++ +RD ++ L Sbjct: 175 FRTFFGFALNDPVNKQMLYFIAAAVLLVVVAVVRQLMQSRYGELLVAVRDGEERVRFLGY 234 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 K+ A+ V++ +AGA FA ++P +I + V +GG T+L Sbjct: 235 DPANIKVVAYTVAALCASIAGALFAPIVGFMAPSQVGILPSIAFLIGVAIGGRTTLLGPV 294 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L F F + +V+ L L Sbjct: 295 LGAIGVAWAQTL--------------FSERFPSEWIYAQGLLFIVVVGFFPAGLAGL 337 >gi|319780305|ref|YP_004139781.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166193|gb|ADV09731.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 300 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 98/302 (32%), Gaps = 20/302 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A GLSIV G L L + +GA+ +L + + + Sbjct: 11 IVNAVSLGSLYALVAVGLSIVFGVLKLTNFAHGDVMMVGAFGVALLVGIG-VPFPVAVIC 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G ++ + + D +A L+ S I+ + + Sbjct: 70 GIAAAAVAGFLIERIAYRPIRDAPDVARLLTSLAVTYIIENVGILVFTSSPRNFPLPDIL 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + S + + + + ++ RT R ++ Sbjct: 130 NTSWEMSN--------GAITFTSINLLTIALTFVSLLLLGWFITRTTTGLGMRAAAEDMS 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + AF V+SA+ G+AG +AA + P M F+ + I+GG Sbjct: 182 AAHLVGLNVNRLIIVAFIVASAYAGLAGILWAAQAGVVQPQM-GFTPLLKAFVAAIIGGF 240 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S++ IL + S + ++ L +L+R Sbjct: 241 GSIAGALVGGYILGALEIFIVAF----------LPSSVSSYRDAIVFAVLIAFLLVRPGG 290 Query: 339 LL 340 LL Sbjct: 291 LL 292 >gi|212697511|ref|ZP_03305639.1| hypothetical protein ANHYDRO_02081 [Anaerococcus hydrogenalis DSM 7454] gi|212675510|gb|EEB35117.1| hypothetical protein ANHYDRO_02081 [Anaerococcus hydrogenalis DSM 7454] Length = 295 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 101/303 (33%), Gaps = 21/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A G ++V G L++ +GAY+ + L + + Sbjct: 7 FFNGLQLGSIYALIALGYTMVYGVAKLINFAHGDIIMVGAYTIFFVVQTSLFKSGLPLYL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + + ++G+ + L ++ I I + + Sbjct: 67 SIIPAIIACTLLGVVIERVAYKPLRNSSSISILITAIGVSLFLE-------NLFVKFFTA 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V S+ + + + ++ L+ + +++ +T + ++ K Sbjct: 120 NAKPVPSIFKQASLNIFGIRLSFQTIFTIVLTIILTIILQIFISKTKYGKMMLAVSEDYK 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G+A + +S +I+P M I + ++GG+ Sbjct: 180 ASSLVGINVDNTMTMTFAIGSALAGVASLLYVSSYPQITPFM-GSMLGIKAFTAAVVGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL + + + ++ + L +V++++ Sbjct: 239 GSIPGAVIGGFILGMIEVMTRAYLSSSYADA-------------IVFMVLIVVLIVKPTG 285 Query: 339 LLR 341 + Sbjct: 286 IFG 288 >gi|229553343|ref|ZP_04442068.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|229313224|gb|EEN79197.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] Length = 289 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 89/288 (30%), Gaps = 12/288 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G + L++ Y +GA+ + + Sbjct: 5 IINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYAINYLHFGFVTALLS 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ G+++ + + + IA LI + L G Sbjct: 65 AMLMASLSGVLIEYLAYRPLRNSPRIAALITAIGVSFFLENGMSFLFGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I + V +L L + +++T + A R + + + Sbjct: 115 -ARNFPQVIATKTYHLGGVDISNVQLLILFTSLVLMILLQFIIKKTTMGKAMRAVAVDPQ 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + FA+ SA G AG + I P M I ++GG+ Sbjct: 174 AAQLVGINPDHVISFTFALGSALAGAAGVMIGLYYNSIDPLM-GMVPGIKAFVAAVVGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 S+ A ++ + + + + + + Sbjct: 233 GSIPGAAIGGFLIGLLETGVQAIGLSAYKDAAVYLVLILVLVVLPAGL 280 >gi|227819496|ref|YP_002823467.1| branched-chain amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|227338495|gb|ACP22714.1| branched-chain amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 335 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 114/325 (35%), Gaps = 27/325 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++L L + ++ ++ + L +V G G+ +L + GA Sbjct: 24 LAGLAVILGLAVVGYLLFPNNLALLTRMTAIALLVLSLDLVTGYCGVATLGHAALFGTGA 83 Query: 79 YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y+ I + L++ + G++ G+ L+ G + ++ + +F Sbjct: 84 YASGIAAVHFGITDPLLMLACGILGGAVAGLVCGVVILRAHGLPQLVLSIALIHLFHEFA 143 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 K T G G+ LG F ++ Y + + + L ++ Sbjct: 144 NKASSWTGGSDGLAGIAPDPLLGY------------FEFDLWGRTAYVLGIILLALVFAL 191 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + R+ R ++++ ++ + A + + +S A G GA A S + Sbjct: 192 LRLVVRSPFGMLCRGVKEDPIRIRAMGASPKLALMKMYVISGAVAGAGGALNAISTQVVG 251 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 D F+ + + +++LGG SL T + + ++ N +++ Sbjct: 252 LDSLSFTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDVVSAANPFHW----------- 300 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 T++ L V+L L Sbjct: 301 ---LTMVGALLIAVVLFAPKGLYGT 322 >gi|134300081|ref|YP_001113577.1| inner-membrane translocator [Desulfotomaculum reducens MI-1] gi|134052781|gb|ABO50752.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Desulfotomaculum reducens MI-1] Length = 293 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 93/288 (32%), Gaps = 11/288 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GAY + G S + + Sbjct: 8 LINGISLGSIYALIALGYTMVYGIVQLINFAHGDIYMVGAYLGFFATAILGWSFIPALLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+++ + K + IA LI + L + L Sbjct: 68 AMIVCAILGVVIEKLAYKPLRNSPRIAALITAIGVSLFLEYGMMLLVKPDVRTFPQVLSE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ +L+ L + + +T + A R + +++ Sbjct: 128 VQYKL----------FGNLVITNRQIIILVITVVLMLLLQYIVHKTRMGKAMRAVSYDKQ 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S+ AG + I+P M + +LGG+ Sbjct: 178 AAQLMGINVNNTISFTFAIGSSLAAAAGVLVGIYYNAINPLM-GIMPGLKAFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + +L V + G + F + + Sbjct: 237 GIIPGAMAGGFLLGIVEAMVSGYGKSLYRDPAAFIILIIILIVLPAGL 284 >gi|317487019|ref|ZP_07945827.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] gi|316921701|gb|EFV42979.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] Length = 297 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 93/307 (30%), Gaps = 22/307 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G ++V G L L++ +GAY + + L + + V Sbjct: 10 FFNALTLGSLYGLIAIGYTMVYGILRLINFAHGDILMLGAYFVFYGTTTFFLPWGVAVVV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + A G+++ + + D I+ LI + + + V + Sbjct: 70 AILAASAVGILVDRIAYRPLRDAPRISALISAIAVSFFIESLSVVVFSGLPRPVYQPEWL 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + V + L ++ + RT A R I + + Sbjct: 130 MTP----------INFGQLKLLPITLVVPVVSFVLVLGLLWIIHRTKPGLAMRAISKDIE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + AF + SA +G +A +I+P M +LGG+ Sbjct: 180 TTRLLGVRVDRIIALAFGLGSALAAASGIMWALRYPQINPYM-GIFPGFKAFIAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + + F + + R Sbjct: 239 GSIQGAMIGGLLLGFIEIMTVAFMPSLSGYRDAFAFVVLVLVLLV-----------RPTG 287 Query: 339 LLRLRTP 345 L R+ Sbjct: 288 LFGQRSE 294 >gi|257469882|ref|ZP_05633974.1| branched chain amino acid ABC transporter permease [Fusobacterium ulcerans ATCC 49185] gi|317064111|ref|ZP_07928596.1| branched-chain amino acid transport system permease livH [Fusobacterium ulcerans ATCC 49185] gi|313689787|gb|EFS26622.1| branched-chain amino acid transport system permease livH [Fusobacterium ulcerans ATCC 49185] Length = 294 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 90/306 (29%), Gaps = 28/306 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLL 95 I + IY + + G ++V G L++ +GAY + + +WL Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYVSLFSIPVFTRIGLPVWLT 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + ++ G + + + + I+ LI + +L Sbjct: 67 VFPAIIVCVILGTLTERIAYRPLRNSPRISNLITAIGVSLLLENTFMKLFTPNTRAFPKV 126 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + ++ LS + ++++T A + Sbjct: 127 FTNPP-----------IVIGRMHLNFGTVVTIVLTIILSVGLQYFMKKTKYGKAMMATSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S +A + A+ ++ P M I +L Sbjct: 176 DYGAAKLVGINVDHTIQLTFAIGSGLAAVASVLYVAAYPQVQPLM-GAMLGIKAFIAAVL 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L + L +V+L++ Sbjct: 235 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADA-------------FVFAILIVVLLVK 281 Query: 336 SHSLLR 341 +L Sbjct: 282 PTGILG 287 >gi|53719611|ref|YP_108597.1| putative branched amino acid related transport system, bifunctional protein (membrane and ATP-binding) [Burkholderia pseudomallei K96243] gi|52210025|emb|CAH35998.1| putative branched amino acid related transport system, bifunctional protein (membrane and ATP-binding) [Burkholderia pseudomallei K96243] Length = 776 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 16 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 75 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 76 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 135 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 136 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 183 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 184 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 243 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 244 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 292 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 293 ----LLYLGLLFVAVVLAAPGG 310 >gi|298290300|ref|YP_003692239.1| inner-membrane translocator [Starkeya novella DSM 506] gi|296926811|gb|ADH87620.1| inner-membrane translocator [Starkeya novella DSM 506] Length = 632 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 116/335 (34%), Gaps = 33/335 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 L + + A+ L Y + + +L+ +FA L ++G G+ Sbjct: 318 PLRPFSAPARVFALAAIALFAAMPLIGTLVSYAPVLALDMLVAALFAASLHFIMGPGGMA 377 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S + +GAY + L L ++ ++ G ++ G Y A+ T Sbjct: 378 SFGHAAYFGLGAYGTAYAVTALDLPTPLAFATGIGVAAFGAVLFGWFCVRLEGVYFAMLT 437 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++I ++ +W+ +T G G++ + + +Y Sbjct: 438 LAFAQIVWSVAFQWEEVTGGSNGLFDVWPEWPFDSRTG------------------LYLA 479 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + ++ L A R RD++ + + + AFA++ A G AG Sbjct: 480 AFVVTLAGLMLLRRLVFAPFGMALRAARDSRLRAEASGIPVARVRWLAFALAGAVCGAAG 539 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA ++ ISP+ +I + +V++GG+ SL + + Y+ Sbjct: 540 GLFAFAKGSISPEAISVGRSIDGLVMVLIGGVQSLVGPVVGAGAFTLLQDSVMRETDYWR 599 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ + + ++L+ + Sbjct: 600 A---------------LLGVLILAIVLLFPFGIAG 619 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 96/308 (31%), Gaps = 9/308 (2%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + + A GLSI+ G ++++ Y +G Y V L W+ P+ Sbjct: 11 VNGLASASGLFLVAAGLSIIFGVTRIVNMAHGSFYMLGLYLAV--TLAPKLGTWIGGPLG 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ L E++Q + + A +++ L Sbjct: 69 FWAGILAAALVVAALGALIEMTLLRRLYGAPELYQLLATFALLLVINDAALFLWGPEDIL 128 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 G L + ++ L + + L L RT R +++ Sbjct: 129 GPRAPGLS--GSVMLLGRRLPQYDIFLALIGPAVLIGLHLLLARTRFGRLIRAATQDREM 186 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L + FA+ + G+ GA A S +V++GGM Sbjct: 187 VAALGINEALLFTAVFALGAGIAGLGGALQMAREPA--SLTLDLSVLGDAFVVVVVGGMG 244 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ A ++ LC + + F + + + + LV+++R H L Sbjct: 245 SIRGAYLAAVLVAEAKALCTALG---VVDIFGFTFNMSRLTLVAEFLVMALVLIVRPHGL 301 Query: 340 LRLRTPSN 347 P Sbjct: 302 FGRPQPPA 309 >gi|291303046|ref|YP_003514324.1| ABC transporter-like protein [Stackebrandtia nassauensis DSM 44728] gi|290572266|gb|ADD45231.1| ABC transporter related protein [Stackebrandtia nassauensis DSM 44728] Length = 563 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 63/305 (20%), Positives = 115/305 (37%), Gaps = 34/305 (11%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-----W 93 +S+ I + + A+ IV+ G LSL ++GAY+ ++ L Sbjct: 5 YESLLTTIALTGILAYSFHIVL-MSGQLSLGQAGFASLGAYTSALVVPETPLFGSLSPAI 63 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + IPV A + A +++GLP L+ RG +LAIAT+ +E+ + ++ T G G+Y+ Sbjct: 64 VGIPVGAAVGAAAAVLLGLPVLRLRGVFLAIATIAFAEVVRIYMVNASW-TGGPEGMYLD 122 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + L A + L + + A + Sbjct: 123 KWVTPE--------------------------LAWLALILVAYTVWRLGPSRMGRALAAV 156 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+++ A ++ + A+++AF S A GM G+ FA I P F F+ + + Sbjct: 157 REDEVAAGAMGINVSRARMAAFTASGALAGMYGSLFAFFARGIEPGDFNFTMMLDGLVTA 216 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMN-FYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 I+GG + L + EL + + L L+ Sbjct: 217 IVGGFLVFFGPIMGSGFLNLLPELQRATGLEAGWMHPFVTGALLLLVILFLPGGLSSLLT 276 Query: 333 LMRSH 337 +R Sbjct: 277 WIRPR 281 >gi|170740221|ref|YP_001768876.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168194495|gb|ACA16442.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 626 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 118/325 (36%), Gaps = 34/325 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 A+ + L Y+ + +IL++ + A+ L +VG GL+S + +G Sbjct: 317 AALTGLAVAALLAVPLVGDAYLVKVATEILVFALAAFSLQFLVGVGGLVSFGHAAYFGLG 376 Query: 78 AYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY+ +L + + L + + + + G ++ G YLA+ TL ++I I Sbjct: 377 AYAAGLLVTGPLRAPMELALLAAPLAGALGAALFGFFIVRLSGIYLAMLTLAFAQIVYAI 436 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 +W +T G G+ +PS++ +Y++ + Sbjct: 437 GFQWVEVTGGDNGLVGV------------------WPSAWAAGRTTYFYLVAAATLACIA 478 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + R RD+ ++ + AF ++ G+AG +A + I Sbjct: 479 ALRRIVFAPFGYGLRAARDSATRAEAIGLDTRTHRWLAFTLAGGAAGLAGGLYAFQKGSI 538 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P + +I + +V++GG+ +L + + + Y+ Sbjct: 539 DPTLAAIPTSIDFLVMVLVGGIRTLMGPLVGAGFFHALKDAVMPLAAYW----------- 587 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 L+ +A+ +L H L Sbjct: 588 ----RLLLGLAIIATVLALPHGLAG 608 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 20/303 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 S + A GL++V G +++ +GAY + S + L + Sbjct: 11 LSGLASAASLFVIASGLTLVFGVTRIVNFAHGSFTMLGAY---LAVSLVPRLLDLSYTPA 67 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + G + + + + L + L +L + + + + L Sbjct: 68 SFFLGVLLAALLVGLIGVAVEVLLLRRLYRVPELFQLLATFGVVLIVEDLVLAIWGPVDL 127 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 +R + + ++ L + L + RT R ++ Sbjct: 128 AGPRAPSLR-HGVEILGQRFPAYDLVLIGIGPALLGLLWLLMHRTRFGILIRAATQDRDM 186 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L + +A G+ GA + + ++GGM Sbjct: 187 VGALGVNQARLFTLTLFLGAALAGLGGALQIPRVPA--NGHMDLAVITDAFVVTVIGGMG 244 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ A ++ + + L+ + +V++++ L Sbjct: 245 SVPGAFLAALLIGELQAFGILL--------------LPKATLVLVFALMAVVLVVKPWGL 290 Query: 340 LRL 342 L Sbjct: 291 LGR 293 >gi|167629192|ref|YP_001679691.1| branched chain amino acid abc transporter, permease protein [Heliobacterium modesticaldum Ice1] gi|167591932|gb|ABZ83680.1| branched chain amino acid abc transporter, permease protein [Heliobacterium modesticaldum Ice1] Length = 293 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 114/305 (37%), Gaps = 24/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Q IY + A G S+V G L LL+L + + + + L + + L +WL +P+ Sbjct: 7 IINGVMQGSIYALVAIGYSLVFGLLNLLNLAHGELFMLSGFIGLFLMTYFDLPLWLSLPL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +GA G+ + + +A ++ + F ++++ G Sbjct: 67 TMLSAGAIGVAVEALCFRPIKKEYHLAPIVSTIAFGSVMVNSMVNLVGSEPQV------- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S + ++ + L + + +T + R + +N+K Sbjct: 120 ----FPSHVDIPDIALGGLLISGSQMVSFVIAATLMVFLSYIVEKTKLGRGIRAMAENEK 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L + + F +S+A G+AG ++S + + ++++++GG+ Sbjct: 176 AAQILGVDVRKTVMITFFISAALAGIAGILVGLRFGKLS-PFIGATIGLKALAVMVIGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ A +L + + + ++ L ++L + Sbjct: 235 GNIYGAMLAGILLGVLEAATVVI------------PGLSPYVDAVIWGFLVFILLFKPTG 282 Query: 339 LLRLR 343 LL R Sbjct: 283 LLGTR 287 >gi|218782216|ref|YP_002433534.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218763600|gb|ACL06066.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 302 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 92/303 (30%), Gaps = 17/303 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + ++ IY + A G ++V G + L++ Y IGA++ +I ++ + + Sbjct: 10 LMGGVVKGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTALIAAGVLTVAGFPAWSI 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + S A + + LI ++ + + Sbjct: 70 LILASAAAVVWSASYGYTVEKIAYKPLRGA---PRLSPLISALGMSIFLQNYVLLAQTSN 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ + + L+++ + A R ++ Sbjct: 127 FMPFKNLFPEEGFLENISEVLSATEVIIVFTSAVVMILLSLFIKYSTTGKAMRATAQDRN 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + F + S+ + A++ +I+ F + + +LGG+ Sbjct: 187 MAMLVGVNVDKVISATFIIGSSLAAVGAVLIASNMGQINFY-IGFIVGLKAFTAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L G + + F L L+++ R Sbjct: 246 GSIPGAMLGGLVLGCTESFGTGYVSSDYEDVFAFT-------------LLVLILIFRPAG 292 Query: 339 LLR 341 LL Sbjct: 293 LLG 295 >gi|170694843|ref|ZP_02885993.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|170140203|gb|EDT08381.1| inner-membrane translocator [Burkholderia graminis C4D1M] Length = 355 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 89/296 (30%), Gaps = 2/296 (0%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L L++ A GL+ + G G+LS + + Y+Y I Sbjct: 21 LVALCLPLVVDANASGNLAYCLLWAFSALGLAAMWGYGGILSFGQTAFFGLSGYTYGIFT 80 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 YG + + + L + + + + ++++ Sbjct: 81 LNYGDTWFESWLGLGAGIAVSIVAAALIGYMIFYGRIKGVFIGIVTLSVTLVLETFMSQT 140 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--IFMYYVLLGMCFLSASIILWLRR 203 + + + + + + + YY++L + +I+ L Sbjct: 141 AGPQWAIGEARLNGYNGMGGMPQLTIPWPGGTLTLENVSFYYLVLLLLIAVYAIMRKLLD 200 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 IR+N + L I +L F + G++GA + I+P Sbjct: 201 GTFGLTLIAIRENPQRAEMLGVDIRRHQLMVFVLGCTLGGLSGALYTIWGSYITPSTMGL 260 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + + V G S+ TA+L+ + + Y LL + Sbjct: 261 TAAAMPVIWVATSGRKSIGGTIIGTALLVWLSQNLAVYGSQYALILLGAILLIVVL 316 >gi|152980329|ref|YP_001354238.1| branched chain amino acid ABC transporter permease [Janthinobacterium sp. Marseille] gi|151280406|gb|ABR88816.1| Branched-chain amino acid ABC-type transport system, permease components [Janthinobacterium sp. Marseille] Length = 309 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 98/307 (31%), Gaps = 8/307 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G L L++ IGA + + + L + Sbjct: 8 IINGLVLGSMYALVALGYTMVYGVLNLINFAHGDVLMIGAMAGLTILKMLNTVAPDLPGI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +I G I ++ + +A L + ++ + + Sbjct: 68 VKLIIAILGAIPVCVAVNVLIERVAYRRLRNAPRLAPLITAIGVSILLQTLAMMIWGRS- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +L+ ++L + +T + A R +N + Sbjct: 127 -PIPFPQEMPTEPLHIMGALISPTQVMLLILAAVAMGLLVLLIEKTRMGRAMRATSENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ + +AG +AA+ M F + S +LGG+ Sbjct: 186 VAGLMGVDSNRVIVMTFAIGAILAAIAGVMWAANYSSAQFAM-GFVPGLKAFSAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + L G L + + L +V+ +R Sbjct: 245 GNIYGAMLGGILLGLIESLGAGYIGDLTGGFLG-----SHYQDIFAFVVLIIVLTLRPSG 299 Query: 339 LLRLRTP 345 ++ R P Sbjct: 300 IMGERVP 306 >gi|301061595|ref|ZP_07202353.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] gi|300444288|gb|EFK08295.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] Length = 326 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 63/333 (18%), Positives = 121/333 (36%), Gaps = 38/333 (11%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 VV L FL Y + +Y A IV G LG ++L + +GAY Sbjct: 12 VVLLLWAFLAALPFLGFSYGVVWVFLLAVYFTLALSYDIVGGYLGYMNLGHASFFGLGAY 71 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + IL ++ +++ +P + +++ A ++ P + RG Y A+AT + + + + Sbjct: 72 TTAILLNQG-FNLFSALPGAMLLAAAFAAVISYPLFRLRGAYFALATFGLVSLIEVLTNN 130 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + +T G GI + + YY++L + + + Sbjct: 131 LRDLTGGSGGISTPPGDH----------------------TLPSYYLVLAVAGGTMVLSQ 168 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + R+ A +IR++++ + K A +SS + G + ISP+ Sbjct: 169 IIARSKFGLALFSIREDEEVAKAFGVPTTLYKGLALIISSVPASVVGGIYVWHMTYISPE 228 Query: 260 M-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F + I + +LGG + + V E Y+ Sbjct: 229 SVFGLEIALSPIIMAMLGGTGIMIGPLVGAVFITLVQEFLWTKVPYF------------- 275 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 H + L L+ L+R+R F++R Sbjct: 276 -HLAMYGTVLVLLGRFMPGGLVRIRWIRPFIQR 307 >gi|228958244|ref|ZP_04119973.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar pakistani str. T13001] gi|229127363|ref|ZP_04256359.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus BDRD-Cer4] gi|229150191|ref|ZP_04278413.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus m1550] gi|228633310|gb|EEK89917.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus m1550] gi|228656196|gb|EEL12038.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus BDRD-Cer4] gi|228801453|gb|EEM48341.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar pakistani str. T13001] Length = 298 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 123/304 (40%), Gaps = 31/304 (10%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98 M QI I+ +FA +++G G++S + + IGAY +L R + + I Sbjct: 1 MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++S I+GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPDVF 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 YYV L + ++ +++I + I N++ Sbjct: 121 RDRF-------------------TFYYVTLICLLIIFVLLRLFTKSSIGKVLKAISQNEQ 161 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L ++ K+ A V+ ++G F + ++ +F + + + ++GG+ Sbjct: 162 RVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L + + Y+ S L + R T ++ + +V+L+ Sbjct: 222 GTLI---------GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKG 272 Query: 339 LLRL 342 L+ Sbjct: 273 LVGT 276 >gi|156933945|ref|YP_001437861.1| hypothetical protein ESA_01771 [Cronobacter sakazakii ATCC BAA-894] gi|156532199|gb|ABU77025.1| hypothetical protein ESA_01771 [Cronobacter sakazakii ATCC BAA-894] Length = 521 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 84/291 (28%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY+ + + + +++ ++ + Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWCVQNALAEFAPQWLTFYPLLALPVAFLVTACAGMA 307 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L W + +A + + + + Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMAFGAQNVEVANPAWLSGGIQVLPNL 365 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I V+ + + L L +T + R + N+ + AF + Sbjct: 366 ILPWNRLVVMGFVMLVLFFTWLVLNKTRLGMNVRAVTQNRAMAACCGVPTGRVDMLAFGL 425 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G + + I +V+LGG+ L+ A L ++ Sbjct: 426 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 483 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R L L+ + Sbjct: 484 LEPQVGAVLGK-------------IAILVMVILFIQKRPQGLFALKGRAVE 521 >gi|264678301|ref|YP_003278208.1| High-affinity branched-chain amino acidtransporter permease livH [Comamonas testosteroni CNB-2] gi|299532144|ref|ZP_07045538.1| High-affinity branched-chain amino acidtransport system permease protein livH [Comamonas testosteroni S44] gi|262208814|gb|ACY32912.1| High-affinity branched-chain amino acidtransport system permease protein livH [Comamonas testosteroni CNB-2] gi|298719806|gb|EFI60769.1| High-affinity branched-chain amino acidtransport system permease protein livH [Comamonas testosteroni S44] Length = 307 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 86/303 (28%), Gaps = 14/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ Y IGAY ++ S G L I Sbjct: 12 LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGDIYMIGAYIGLVTLSAIGTQSGLPIWA 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + I I Sbjct: 72 IIGLMLVVAVFVTGVYGLVVEQVAYKPVRQSPRLVALISAIGMSIFLQNWVALGQGARDM 131 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ F + V ++ L ++ ++++ + + A R + Sbjct: 132 AVPSLLPGAINFHMGNFEVFIPYTRVLIIAVTVVLMIALTMYIKHSRMGRASRACAQDMH 191 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + + + G A + +++ F I + +LGG+ Sbjct: 192 MANLLGIDTNKVISFTFVLGAVLAAVGGVLIALAVGKLN-PFIGFLAGIKAFTAAVLGGI 250 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL + ++ F L +++ R Sbjct: 251 GSIPGAMLGGVILGVAETFAAAYISSEYKDIVAFG-------------LLVTILMFRPSG 297 Query: 339 LLR 341 LL Sbjct: 298 LLG 300 >gi|171913403|ref|ZP_02928873.1| putative branched-chain amino acid transport system permease protein [Verrucomicrobium spinosum DSM 4136] Length = 308 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 95/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+++ G +G++++ A+GAY+ + + P ++ Sbjct: 21 ISLFSVLLLMGLGLAVIFGQMGVINMAHGEFMALGAYTVYLCSTLTAEYAPSFGPYYFVV 80 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++ + + +L W + + T Sbjct: 81 AIFIAFVVCALVGAAVEW--LMIRRLYHRPLDTLLATWGLSLIMQQTFRSTFGAREVTPT 138 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P + I +VL +S +++L++ +++ R N+K + Sbjct: 139 LPEWLMGSYSPKEGLDIPINGMFVLGLAIAVSLALLLFMYKSSFGLRLRATVQNRKMSGA 198 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + AFA+ G+AGA A + + + +V+ GG SL Sbjct: 199 VGINTNSVDRLAFALGCGIAGIAGA--AFTTIGSTGPDSGSRYIVDAFLVVVFGGAASLM 256 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + + +++R L Sbjct: 257 GSLASAFGIAQAQSILEFFLEGTKGKVATL-------------LVIVIALMIRPQGLFPS 303 Query: 343 R 343 + Sbjct: 304 K 304 >gi|91976257|ref|YP_568916.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91682713|gb|ABE39015.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 305 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 104/312 (33%), Gaps = 28/312 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90 + + + IY + A G ++V G +G+++ + IG + +I + L Sbjct: 8 LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSFGLTFVPL 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ VS I+ G + + + +A ++ + +L+ + + G Sbjct: 68 ILLVVLLVSMAITALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLMNYSQVAQGARVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V + T S F S+ I + VLL A + +T + Sbjct: 128 PVPPIITGGYTLHESADGFNVQLSNVQILVVITTIVLL------AIFTWLVAKTRLGRDM 181 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +Q L + F + +A +AG + + M F I Sbjct: 182 RACEQDQTMASLLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFM-GFVAGIKAF 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL ++ + + + + F L + Sbjct: 241 TAAVLGGIGSLPGAMLGGLLIGLIETMWSAYFSVEYKDVAAFS-------------ILIV 287 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 288 VLIFMPTGLLGR 299 >gi|167825451|ref|ZP_02456922.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei 9] Length = 359 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + + Sbjct: 85 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 144 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + S + + Sbjct: 145 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 202 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +L + L +T + R + N++ + AFA Sbjct: 203 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 262 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ S + V+LGG+ ++ L V + Sbjct: 263 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 320 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L I R + L+ S Sbjct: 321 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 358 >gi|149909705|ref|ZP_01898357.1| hypothetical protein PE36_22340 [Moritella sp. PE36] gi|149807219|gb|EDM67174.1| hypothetical protein PE36_22340 [Moritella sp. PE36] Length = 375 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 96/336 (28%), Gaps = 33/336 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 LL + Y ++ + L Y + A + +V G LG+L+L +A+G Y+ + Sbjct: 36 LLVPQGHFLHIETYTITLLGKYLTYALLAMSVDLVWGYLGILTLGHGAFFALGGYAMGMY 95 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 R + LP D A L++ + + + + ++ Sbjct: 96 LMRQIGDRGVYGHPELPDFMVFLDWQELPWFWQGFDMFWFACLMVVLVPATLALVFGFLS 155 Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + + + F ++ ++ Sbjct: 156 FRARVSGVYFSIMTQALTFALMLAFFRNEMGFGGNNGLTDFKDILGFSLQADTTKVSLFM 215 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + L + + + IRD + + + KL F +S+ G+A Sbjct: 216 ASVVALILGYLTCRKVVSSRLGKVAVAIRDAEPRVRFIGYNVANFKLGIFILSAMLAGIA 275 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA + I+P F +I ++ V LGG +L ++ Sbjct: 276 GALYVPQVGIINPGEFSPLNSIEIVVWVALGGRATLFGAIIGALLINYAKSW-------- 327 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F + L L + Sbjct: 328 ------FTIELPEVWLFALGSLFVLATLFLPKGVTG 357 >gi|76811610|ref|YP_333227.1| ABC transporter [Burkholderia pseudomallei 1710b] gi|76581063|gb|ABA50538.1| ABC-transporter [Burkholderia pseudomallei 1710b] Length = 758 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 16 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 75 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 76 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 135 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 136 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 183 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 184 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 243 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 244 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 292 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 293 ----LLYLGLLFVAVVLAAPGG 310 >gi|187924793|ref|YP_001896435.1| branched-chain amino acid ABC transporter inner membrane protein [Burkholderia phytofirmans PsJN] gi|187715987|gb|ACD17211.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 430 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 116/337 (34%), Gaps = 30/337 (8%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 ++ + LA++ L + F+ Q ++ + Q ++FA ++++G GLLS Sbjct: 17 ARWRVLAPWLALILFLAVPPFVWP---QSWLLAYLAQTATMIVFALSYNLLLGETGLLSF 73 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 +GA + +R G+ + LL V + CG++ G S + G A+ TL Sbjct: 74 GHAAYSGLGALMAAQVFNRIGVPLALLPLVGGIGGALCGVLFGFISTRRAGTAFAMITLG 133 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + E+ G+AG+ + S Y ++ Sbjct: 134 LGELVAAAAWTLPDWFGGEAGVAI------------DRASGVPLGSWSFGPAREAYALIA 181 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 C L+ +++ L RT +RDN ++ + +S+ F G+AG Sbjct: 182 VWCLLACAMMFALSRTPFMRLANAVRDNPVRAAAIGCCPRRVRYGVVVMSAFFAGIAGTL 241 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + + +S + + V+ ++GG + +L + + Sbjct: 242 ALINVELVSTESVGMMRSGAVLIATVIGGTAAFFGPVAGAVVLTFFSVAVASVTRAW--- 298 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + ++++M L Sbjct: 299 ------------LFYLGLFFIVIVMMSPDGLAGFARR 323 >gi|319405716|emb|CBI79339.1| permease protein of ABC transporter [Bartonella sp. AR 15-3] Length = 353 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 66/339 (19%), Positives = 117/339 (34%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K I L + + FLF Y + I I + A L+++ G G+ S Sbjct: 1 MAKSLNIFLSLVSIIIFISFLFYADNHFNDYTLRIINLIAINAILAISLNLIYGFTGMFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY I ++ + I+ + + L+ A + Sbjct: 61 LGHAGFMAIGAYVCAIFLLSPEQK--EMMWILEPIAEPLKNLQLSFFVAVNISGLSAAII 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + F + + + G R+ + + I + + Sbjct: 119 GLLIAFPVLRLGGDYLGIATLGFAEIIRVLIINAIPLTN----GSLGIKGIPQYATLWWN 174 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G + I L ++ N R IRD++ A + F + +F V + F G+ GA Sbjct: 175 FGWLAFTIIFISLLLQSNTGNVLRAIRDDEIAAKMMGVNTFFYRCFSFTVGAFFAGIGGA 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I P MF F ++ IV+ GG+ S++ ++ I+ V+E + Sbjct: 235 LTAALISTIDPKMFNFILTFNILMIVVAGGLGSITGSVISSIIITIVLEWLRIVENPLNL 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + + L +IL LL R S Sbjct: 295 GFIYIP-GVPGLRMVIFSLMLLAIILYWQKGLLGQREFS 332 >gi|319780405|ref|YP_004139881.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166293|gb|ADV09831.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 323 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 124/334 (37%), Gaps = 33/334 (9%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 K L + V +L L + +++L + +FA ++++G GLLS Sbjct: 11 AKTSARLEWMLVGLGILALLVAPFLIYPIF----LMKMLCFALFACAFNLLLGYTGLLSF 66 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + AY +G I + + G++MG +++ +G Y A+ TL Sbjct: 67 GHATFFGGAAYFTAHAVKVWGWPPEAGILLGMAGAALLGLVMGFFAIRRQGIYFAMITLA 126 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 +S++F ++ ++ + R + + MYY +L Sbjct: 127 LSQMFFFFCVQ--------------SPFTQGEDGIQGVPRGMLLGVLDLNVSLNMYYFVL 172 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + I + + R+IR+N+ SL ++ KL AF +S+A G+AG+ Sbjct: 173 AVFLIGVFAIWRIVNSPFGMILRSIRENENRAISLGYSVANYKLGAFVMSAALAGLAGSL 232 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A + + + VI + +LGG+ ++ +++IG+ F Sbjct: 233 KAIVFQFATLTDVTWQMSGEVILMTLLGGIGTMVGPIIGASLVIGLENTLATSGFPV--- 289 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 T + + +L+ ++ Sbjct: 290 ------------TIATGLIFMVCVLIFRRGIVGE 311 >gi|261366950|ref|ZP_05979833.1| galactoside ABC transporter, permease protein MglC [Subdoligranulum variabile DSM 15176] gi|282571068|gb|EFB76603.1| galactoside ABC transporter, permease protein MglC [Subdoligranulum variabile DSM 15176] Length = 549 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 38/337 (11%), Positives = 96/337 (28%), Gaps = 22/337 (6%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F L+ Y I+ + + + + + I ++ Q + A G++ ++ Sbjct: 219 FLLKNGLYLAIIVIFIALCIITPIVKNVQLLTVNNILNILQQASPRMFLALGVAGLILLA 278 Query: 64 GL-LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G LS+ ++ + A + V+ S++ I + + + L Sbjct: 279 GTDLSIGRMVGMGMTAATIVMHQGINTGSVFGHIFDFTGLPVIVRVFLALIVCIVLCTIF 338 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 + F+ I+ + + + + V PS + Sbjct: 339 TTIAGFFTAKFKMH----PFISTMANMLVIFGLVTYSTKGVSFGAIETTIPSMIIPKIGG 394 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 ++L + +T + N +A ++ + AF ++ Sbjct: 395 FPTIILWAIAAVVIVWFIWNKTTFGKNLFAVGGNPEAAAVSGISVFRVTVGAFILAGILY 454 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVE 296 G + + I+ ++ GG+ +S + I + Sbjct: 455 GFGSWLECIRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTY 514 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 + N++ +I L V+L Sbjct: 515 SLTTL-----------GIDTNLQFVFSGIIILVAVML 540 >gi|163854851|ref|YP_001629149.1| branched chain amino acid ABC transporter permease [Bordetella petrii DSM 12804] gi|163258579|emb|CAP40878.1| probable branched-chain amino acid transport system, permease component [Bordetella petrii] Length = 317 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 128/297 (43%), Gaps = 15/297 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L +V L LF + A + S+ ++LIY + A L++++G G+++L + G Sbjct: 9 LGLVLALALFPYAAAALGLDFYVSVARRMLIYALAATSLNLILGYGGMVALGHAAFFGAG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY IL + + L P +A+++ +++G SL+ RG Y + TL +++ + Sbjct: 69 AYVVGILDAAGIHAALLAWPAAAVVAALLALLVGAVSLRTRGVYFIMITLAFAQMVYYLF 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + +L + P + YY++L + L + Sbjct: 129 VSLRQYGG---------------EDGLNLSGYSLLPGIDLADGTSFYYLVLALFVLLMWL 173 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L + A + IR+N+ +L + KL+AF +S A G+AGA A IS Sbjct: 174 FGRLVDSRFGAALQGIRENESRMEALGYPVYRLKLTAFVLSGAAAGLAGALLANHNLFIS 233 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 P + ++++ ++ +V++GG+ +++ + E+ Y+ L Sbjct: 234 PSLMHWTQSANLLVMVLVGGIGLRYGGVAGAMLMLALEEVLRMWTEYWHLPLGILLL 290 >gi|134287661|ref|YP_001109827.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134132311|gb|ABO60046.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia vietnamiensis G4] Length = 389 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 91/334 (27%), Gaps = 36/334 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI------- 83 + ++ + L Y A GL I G G+LSL + + +G Y+ + Sbjct: 50 FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 109 Query: 84 -----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + + L + Sbjct: 110 DPAATHTQTTPGIPDFMDWNQLTALPTWWKPFHSLPFSILAVLVVPTALAFVIGYAMFKR 169 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188 + + VA L L + + ++ +Y+V Sbjct: 170 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLVLYFVNA 229 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + W++R+ + +RD + + K+ AF +++ + GA Sbjct: 230 ALLIGALLAGRWVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAVGGAM 289 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 F +SP +I ++ +GG SL ++ Sbjct: 290 FTLQVGFMSPSFVGIVPSIEMVVYAAIGGRMSLVGAVYGAILVNLGKSW----------- 338 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F SF LM V+++ + L L Sbjct: 339 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGL 369 >gi|297197581|ref|ZP_06914978.1| inner-membrane translocator [Streptomyces sviceus ATCC 29083] gi|297146778|gb|EFH28335.1| inner-membrane translocator [Streptomyces sviceus ATCC 29083] Length = 357 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 119/309 (38%), Gaps = 21/309 (6%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + Y + ++ + A GLS++ G +GL+SL + A G ++ LG L W Sbjct: 51 FTSAYWIQVLTAAAVFSVAALGLSVLYGRVGLISLGQIAMLAAGGWTAQRLGQTGALPFW 110 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L++ + +++G G+++GLP+L+ G YLA+ TL+++ +L G + Sbjct: 111 LVLLATGVVTGLIGIVIGLPALRLSGLYLALITLMLAAAVTIVLTNTNFPNGGPGFLGYD 170 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 R + + + +C L + + R AW I Sbjct: 171 PVKSGTVPLARP---------GVAAGDTAYFRYTVVVCALMFLLAIAHTRGRPGRAWAAI 221 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R ++ A + + KL AFA++ G+AGA AAS ++ F E+I +++ + Sbjct: 222 RQSEHAAVAAGINVTLYKLWAFALACFMTGVAGALLAASAGGLTVYQFPPQESITLLAAL 281 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++ GM + +L + L + + L ++ Sbjct: 282 LMAGMYHFAGAVVTGLMLKAMPALLDTWGVS------------GNVLLIVFGVGLVQTLV 329 Query: 334 MRSHSLLRL 342 + Sbjct: 330 ASPEGIAGR 338 >gi|75674863|ref|YP_317284.1| ABC-type branched-chain amino acid transport system permease component [Nitrobacter winogradskyi Nb-255] gi|74419733|gb|ABA03932.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Nitrobacter winogradskyi Nb-255] Length = 349 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 120/345 (34%), Gaps = 33/345 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 L L L+ + L A + + ++ ++ +I+ + A L+ + G +SL Sbjct: 15 RSFALSSLITSAVLIALVTLPAVLPEFWTVNIFVRAMIFGIVALSLTFLAHYGGFISLAQ 74 Query: 71 VIAYAIGAYS------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 ++ + Y+ I + + L + ++ ++S G+ +G +++ R YL + Sbjct: 75 MVPAGVAGYTIAVTVPDAIPANGFQLPYGPAVALALVLSTVAGLTIGAVAVRTREIYLLM 134 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL ++ F + NG GI S + Y Sbjct: 135 ITLAIAVSFYFFVQANVEFLNGYEGIRNVMGP--------------DILSVPLRTPAIFY 180 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + +L + ++++++ R + + IRDN + +L + ++ AF ++ G+ Sbjct: 181 HAVLAVSVALYALVIYVSRAPLGLVLQGIRDNPRRISALGFNVALHRIVAFGLAGFIAGV 240 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G ISP I ++ I ++GG+ I + Sbjct: 241 GGVLLTFYNIGISPGTVSTHATISILIIAVIGGLGHPIGAFIGAFIFTIFDTFAADIYD- 299 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349 R TL+ +++ ++ L N L Sbjct: 300 ------------RDRFNTLIGAVFLTIVVASPDGIIGLIKRGNAL 332 >gi|104780490|ref|YP_606988.1| branched-chain amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95109477|emb|CAK14178.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 307 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 87/290 (30%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSLPI 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 ++ + + + + I I + + Sbjct: 71 LMTVAFVATICVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNTVLLSQDSKDK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + F + V+ V + + L++ R+ + A R ++ Sbjct: 131 SIPNLIPGAFSFGPGGAEEVLVSYMQILVFVVTLIAMTCLTLFISRSRLGRACRACAEDI 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A + I+P+ F + + +LGG Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ +L + + ++ F + I Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|76801645|ref|YP_326653.1| urea/short chain-amides ABC transporter permease [Natronomonas pharaonis DSM 2160] gi|76557510|emb|CAI49091.1| ABC-type transport system permease protein II (probable substrates urea/short chain-amides) [Natronomonas pharaonis DSM 2160] Length = 373 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 106/322 (32%), Gaps = 11/322 (3%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 ++ L + + + Q A LS+V G G+LS V + + AY+ Sbjct: 35 FVVVVAGLAVYPMTTDPFSIQTTTQYFALAFLALSLSVVWGYCGILSFGQVAFFGVAAYT 94 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 + ++G +G + + + I L F G + I++ + +L + Sbjct: 95 FGVIGINFGTAGGITAALLGAIVVGALFAAALGYFMFYGGVRDVYVTIITLVVALVLNTF 154 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE-IFMYYVLLGMCFLSASIIL 199 T G RL + V ++ + YY+LL ++ + Sbjct: 155 AAQTAGSEWAIGEARLGGFNGMPDIPDLVLGVGGASVAFDRVAFYYLLLAALVVTYLGLR 214 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + +R+++ + + F KL F + A G F+A + I P Sbjct: 215 AFVNSGFGMTMVAVREDEARTETFGYNVPFIKLVVFTIGGALAAAGGVFYAVWGNFIDPS 274 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 +F + + V +GG SL AT + + Sbjct: 275 VFGILFAALPVVWVSVGGRESLIGAIGATFAIEWMRTGLTD----------GVGPLGPEW 324 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 ++ L +VIL+ ++ Sbjct: 325 AFVIIGGLLMVVILVMPAGIVP 346 >gi|320449593|ref|YP_004201689.1| HmgE [Thermus scotoductus SA-01] gi|320149762|gb|ADW21140.1| HmgE [Thermus scotoductus SA-01] Length = 322 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 99/314 (31%), Gaps = 12/314 (3%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + I I +Y M A G ++V G L L++ + IGA V + + Sbjct: 8 LLPQVIFDGFILGFVYAMVALGYTLVYGVLELINFAHSEIFMIGAVVGVEVFRYLAPQVE 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKF-RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + + G + G+ ++ R Y + + ++ + + + Sbjct: 68 SGFLLLLLALILGGAVAGITAILVERFAYRPLRKRGTTNRLVPLITAIGVSFILQDLVRL 127 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM-----YYVLLGMCFLSASIILWLRRTAIS 207 + L+ +R S + + ++ + + + RT + Sbjct: 128 IEGLWHNEFFLRMRTVEDLEGSVELFGGAIFAQTKSFILMGVSILMLVGLTYLVNRTKLG 187 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 A R + + + F + + G+AG FA I+P + F I Sbjct: 188 VAIRAVAQDLHTASLMGIDPDRIISRTFLIGGSLGGVAGVLFALQYTTITPYV-GFLPGI 246 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ ++ +L + N + + Sbjct: 247 KAFTAAVLGGIGNIPGAMLGGLVLGQLENFFGTYLPILTNGNFG-----TEYKDVVAFLI 301 Query: 328 LFLVILMRSHSLLR 341 L L++L+R LL Sbjct: 302 LILILLLRPQGLLG 315 >gi|170077024|ref|YP_001733662.1| branched chain amino acid ABC transporter permease [Synechococcus sp. PCC 7002] gi|169884693|gb|ACA98406.1| ABC transporter, Branched-chain amino acid transport, permease protein [Synechococcus sp. PCC 7002] Length = 357 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 93/328 (28%), Gaps = 28/328 (8%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + + ++ + + L + A G+ ++ G GLLSL I +A+G Y+ + S Sbjct: 1 MVILPLILPEFRLKLVGRFLSMAIVALGIDLIWGYTGLLSLGQGIFFALGGYALAMHLSL 60 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 + + + + L+ I Sbjct: 61 QLPDGAIPEFFMLYGVEKLPLFWQPFYSLPLTLLAMVLVPGIVAGILGYLVFRNRIKGVY 120 Query: 148 AGIYVADRLYFLGTTVRSLIR--------------FFRFPSSFVIYEIFMYYVLLGMCFL 193 I L + F ++ Y + L Sbjct: 121 FSIITQAALLVFFNFFNGQQKLINGTNGLKTDTAVFLGQRVGDSGIQLLFYETTIVALLL 180 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + WL IRD++ + K+ FA++ A G++GA + Sbjct: 181 VYLLCRWLTSGRFGRMLIAIRDDETRVRFTGYDPTWFKVVVFAIAGAIAGISGALYTVQS 240 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I+P+ + + +I ++ V +GG +L T ++ Sbjct: 241 GIITPNYMEVAFSIEMVISVAVGGRATLIGAIIGTILVNFARIYLSE------------- 287 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 SF +V+ + ++ Sbjct: 288 -SFPEIWLFFQGALFLIVVTVLPDGIVG 314 >gi|111222045|ref|YP_712839.1| branched-chain amino acid ABC transporter ATP-binding protein [Frankia alni ACN14a] gi|111149577|emb|CAJ61270.1| hypothetical protein; putative membrane protein involved in branched-chain amino acid transport, ATP-binding [Frankia alni ACN14a] Length = 926 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 108/294 (36%), Gaps = 14/294 (4%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R + V +L L + + L YV+ L ++V + G + Sbjct: 297 RSRALVVPWPVQGVGGAAVLVLLAFIPQIDTLHLTDWTNALSYVILFLSLGLLVRTSGQV 356 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 SL V AIG + L L L + VS +I+ G ++ +P+++ G YLA+AT Sbjct: 357 SLCHVSFMAIGVSAMSHLTQSEHLPWLLALIVSGLIAIPVGAVLAIPAIRLSGLYLALAT 416 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + Q + + R +V S YY+ Sbjct: 417 FGFGILLQYMFYTEHYMFGESGVGLTLSRPAVSWLSVSSDK--------------GYYYL 462 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + +A+ L + R+ + R + D+ + ++I ++ F +S+ AG Sbjct: 463 VLVLAAAAAATTLMITRSRLGRLLRALADSPVGLATSGSSINVTRILVFCLSAFLAAEAG 522 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 A S ++S D + ++ +++++ A+ LI + L Sbjct: 523 ALQGVSAQQVSGDAYSPLLSLTFFALIMIVPGRDPWYALFASFGLILIPALAAF 576 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 93/289 (32%), Gaps = 11/289 (3%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + + +Y + A GL + + GL +L + AY + L L L Sbjct: 5 PYLIAGLVTGSVYGLAATGLVLTYKTSGLFNLGHGALATVAAYLFYELNVHANLPWGLAA 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++ G ++ + G + + F +++ + V + Sbjct: 65 AICVLVGGPVLGLVFELIARSLGSTGLSVRIASTIGFLLVVVSIVSLRYDSTTTRVVPQ- 123 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + F + + +A++ ++ RR + A R + D+ Sbjct: 124 ---------YLPQSSFHLGSTPITAAQVIIAVLGVTATAALAVFFRRARLGAAMRAVVDD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + T+ + + ++ + + F +G A ++P F + +G Sbjct: 175 GPLLDAAGTSALSVRRWSWIIGATFAATSGVLLAPLLAELNPLNLTFLV-VTAFGAAAIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 +SL ++ +LC + L F + L++ Sbjct: 234 RFSSLPLTYGGGLVIGVAQQLCTKQFTTGVLTGLAPALPFLVLFVVLLI 282 >gi|119897417|ref|YP_932630.1| putative branched-chain amino acid transport permease [Azoarcus sp. BH72] gi|119669830|emb|CAL93743.1| putative branched-chain amino acid transport permease [Azoarcus sp. BH72] Length = 330 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 117/306 (38%), Gaps = 29/306 (9%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y +++LI ++ A L+ ++G G+++L +GAY+ V + + W Sbjct: 28 FGLDYYTGFVMRVLIVMLIATSLNFLMGYGGMVALGHAGFVGVGAYALVAMTEAGITNAW 87 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + + + +++G SL+ RG Y + TL +++ + + + +A Sbjct: 88 ALWGGAMLAASVAALLVGAVSLRTRGVYFIMITLAFAQMLYYLAVSLRAYGGDDGYNLMA 147 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L G +Y+V+L +C L + A + Sbjct: 148 RPLLGFGLNADDD--------------ATLYWVVLAVCALCFLFFHHAIGSRFGQALIGV 193 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 RDN+ +L + KL AF +++A G+ GA ISP +S++ ++I IV Sbjct: 194 RDNESRMLALGYPVFLLKLQAFVIAAAVAGLGGALMVTQNSFISPSSMHWSQSAVLIVIV 253 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ A+ + + E+ Y+ + L +IL Sbjct: 254 VLGGLGHRWGGVIGAAVWVSLEEVLRMSTEYWHWP---------------LGALLIAIIL 298 Query: 334 MRSHSL 339 L Sbjct: 299 FAPDGL 304 >gi|317405256|gb|EFV85590.1| urea ABC transporter [Achromobacter xylosoxidans C54] Length = 352 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 85/291 (29%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY ++ + + + + + ++ Sbjct: 79 ITFGLMGVINMAHGELLMIGAYVTYLVQTAFRAWLPGWLDWYVAAALPLAFVVTALVGMA 138 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W G+ + S + + Sbjct: 139 LER--TVIRWLYGRPLETLLATWGISLMLMQGVRTLFGAQNVEVGNPSWMSGGFTVLGGL 196 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ + L T + R I N++ + + AF + Sbjct: 197 VLTYNRLVIIGFALFVVFLVWALLNHTRLGLFVRAITQNRRMADCVGVPTGRVDMLAFGL 256 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A S+ + +V+LGG+ L+ A L GV + Sbjct: 257 GSGIAGLAGV--ALSQLGNVGPDLGRGYIVDSFMVVVLGGVGQLAGTVIAALGLGGVNKF 314 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 +++ + L + R L R S Sbjct: 315 LEPYAGAVMAK-------------ITILVLIVLFVQKRPQGLFAPRGRSVE 352 >gi|241258639|ref|YP_002978523.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863109|gb|ACS60772.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 861 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 91/299 (30%), Gaps = 23/299 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L + + L + + + S + ++ + + ++ A +VV + Sbjct: 544 LARRELGLFAAIAAVVIPISILNIRMLSGANLSALAMDAGLLMIVAVAQMLVV-ITRSID 602 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L+ + AY + + A + G + + + + TL Sbjct: 603 LSVAAIIGLAAYGAASTIHLHPEIGVMGGVALACVIGLAAGFLNGLIVTYGRVPAIVVTL 662 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 IF+ + L+ GT V + + + VL Sbjct: 663 GTMSIFR-----------------GINSLWAGGTQVSADQVPQAWLDMTAANIFGVPAVL 705 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + LR T+I I N + L AF+ + G GA Sbjct: 706 LIAIATLLVVAYILRNTSIGRELFAIGSNPGGASLIGIPSRARILMAFSAAGLLAGFDGA 765 Query: 248 FFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301 +A+ + + E ++ ++V+ GG ++ +A +L+ + + Sbjct: 766 LWASRYATVDARVAYGFELTVIAAVVVGGIAVRGGSGTVLGVAAGALMLLIINNGLTLV 824 >gi|116748280|ref|YP_844967.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116697344|gb|ABK16532.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 301 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 100/305 (32%), Gaps = 16/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + +GAY + L S L L Sbjct: 8 LTNGLAVGSIYALIALGYTMVYGVLKLINFAHSDLFTLGAYLGLTLLSSLLLVDRLGPLG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A++ A M + + + + ++ + + Sbjct: 68 GALVLAAMVMGLVAVAGALLDRVAYRPLRESPRL--SAVVSALGASIFLQNTIMLIYGAR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ V + +L + A + +++++T I A R +Q Sbjct: 126 YRVYPPDILPKASIHMLGVDIPLVRILILGASVIMMAGLFVFIQKTRIGTAIRAAAIDQG 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + L F V A G AG +I+ M + + + ILGG+ Sbjct: 186 AARLMGIDVNRVILLVFMVGPALGGAAGLMVGLYYGQINFTM-GWGYGLKAFTAAILGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + + + + + F L L++++R Sbjct: 245 GNIPGAMVGGILLGLIESMSAAYLSFAWKDAIAFC-------------VLILILIVRPTG 291 Query: 339 LLRLR 343 LL R Sbjct: 292 LLGER 296 >gi|209515135|ref|ZP_03264003.1| inner-membrane translocator [Burkholderia sp. H160] gi|209504389|gb|EEA04377.1| inner-membrane translocator [Burkholderia sp. H160] Length = 328 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 69/310 (22%), Positives = 119/310 (38%), Gaps = 30/310 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y + L++V+ GL++ VG G SL IGAY+ IL Sbjct: 20 PPFLKNYGVYLSSYWLVFVIATMGLNLTVGYAGQKSLGHAAFLGIGAYTAAILLKAGIS- 78 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 WL +P++ ++ G+I+G P+L+ R YLA ATL + ++ + +T G G+ Sbjct: 79 FWLGLPLAMIVCFLVGLILGFPALRVRTIYLAFATLGFNTAVWLVIRNEEWLTGGTYGLN 138 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 R + + YY++L + L + L + A+ Sbjct: 139 GITRPSIF--------------GFSLANSLAFYYLILVVAILLGLALWRLLGSPWGKAFT 184 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RDN SL L +FA+ +A+ G AGA A + + P F +I++ Sbjct: 185 ALRDNPIRAESLGIDTRRYTLLSFAIGAAYAGAAGALLAPLVEFMDPAPFTVGASIMMYL 244 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V++GG A+ I + E + I +F + Sbjct: 245 MVVVGGAGYFFGPLVGAAVGIVLPEWLRFAQG---------------WYLFAFGITVFAL 289 Query: 332 ILMRSHSLLR 341 +L LL Sbjct: 290 MLWLPDGLLS 299 >gi|319791076|ref|YP_004152716.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315593539|gb|ADU34605.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 320 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 131/324 (40%), Gaps = 29/324 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L V L F + + ++LI + A L+ ++G G+++L Sbjct: 8 IGLGLVFLLLAAFPLIAPLFGLDFYIGFVRRVLIVALAAASLNFILGFGGMVALGHAGFI 67 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY+ V L +S W++ P++A+++G ++G +L+ RG Y + TL +++ Sbjct: 68 GMGAYTVVALSDAGVMSAWVMWPLAALVAGLVAALIGTVALRTRGVYFIMTTLAFAQMLY 127 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +++ + G G + R P + E Y+V+L + L+ Sbjct: 128 FVVVSLRR-YGGDDGYTLMSRPT-------------LLPGLDLGNESNFYWVVLVIVALA 173 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + ++ +A IRDN+ +L + +L AFA++ A G+AGA A Sbjct: 174 LWWLHRATQSRFGHALMGIRDNETRMRALGYPVFRLQLVAFAIAGAIAGLAGALLAGGNG 233 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP ++++ ++ +V++GG+ + + + E ++ Sbjct: 234 FVSPATMHWTQSATLLVMVVIGGLGRSWGGPVGAIVWLLLEEFLKQHTEHWH-------- 285 Query: 315 SFNMRHTTLMVIALFLVILMRSHS 338 + + L V L Sbjct: 286 -------MPLGLLLIAVALWAPKG 302 >gi|83746320|ref|ZP_00943373.1| amide-urea transport system permease protein [Ralstonia solanacearum UW551] gi|207742758|ref|YP_002259150.1| permease transporter protein [Ralstonia solanacearum IPO1609] gi|83727070|gb|EAP74195.1| amide-urea transport system permease protein [Ralstonia solanacearum UW551] gi|206594152|emb|CAQ61079.1| permease transporter protein [Ralstonia solanacearum IPO1609] Length = 406 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 +L + V L+ A Y ++ +I+ Y + A L +V G G+LSL + Sbjct: 32 SLLVCIGVPVCALVVPQGHALHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGL 91 Query: 73 AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 +A+G Y+ + +++ L Sbjct: 92 FFALGGYAMGMYLMRAIGRDGVYQSDLPDFMVFLDWKALPWFWHGTEHFAWAALLVVLVP 151 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + A + +I + + + R FP Sbjct: 152 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 211 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + V ++ L+ + + IRD + + + KL Sbjct: 212 AAVSTRTVLFVATFIALVLAFIACRAIVTSKFGRVVTAIRDAEARAMFCGYSPLGYKLLV 271 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 + S+ G+AGA + I+P +I + V +GG +L ++ G Sbjct: 272 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLVGPIVGAFLVNGA 331 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + ++ LV L + +L Sbjct: 332 KTVLTAW--------------VPEYWLFVLGAVFVLVTLFLPNGVLG 364 >gi|253580172|ref|ZP_04857439.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848691|gb|EES76654.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 295 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 104/306 (33%), Gaps = 24/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ S +Y + A G ++V G +L+ +G+Y + S GL+ L I Sbjct: 6 SYLISGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGSYVVYVAVSGMGLNPILAI 65 Query: 97 PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +S +I G+++ + R +A LI + +L + G ++ Sbjct: 66 LLSIIICTLMGVVIEGVAYRPLRNAASPLAVLITAIGVSYLLQNVALLIWGADTKSFSNV 125 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + ++ ++G + A ++L++ +T A + + Sbjct: 126 ISLPSLKLAG---------GSIVITGVTIVTIIGGILIMAGLMLFISKTKTGQAMLAVSE 176 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + FA+ S +AG ++ ++P I + Sbjct: 177 DKGAAQLMGINVNKTISITFAIGSGLAAIAGVLLCSAYPSLTPYT-GAMPGIKAFVAAVF 235 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ +L + + F L +V++++ Sbjct: 236 GGIGSIPGAFIGGVVLGILEIFGKAYISSQMADAIVFG-------------VLIVVLVVK 282 Query: 336 SHSLLR 341 +L Sbjct: 283 PTGILG 288 >gi|241663092|ref|YP_002981452.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|240865119|gb|ACS62780.1| inner-membrane translocator [Ralstonia pickettii 12D] Length = 444 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 112/338 (33%), Gaps = 8/338 (2%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + L ++ + L+ + L Q + ++ Q+ I ++FA ++++ Sbjct: 24 MKFKPVNLARW------MLWGTTALVMIVLPLIWPQGFAITLLSQMGIMIIFALSYNMLL 77 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G+LS + +GA+ V L + + + + ++ A I G G Sbjct: 78 GQSGMLSFGHAVYAGLGAFMAVHLLN--KIGAVQALGIGGPLAVALLPIAGGLGGALFGV 135 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 T S ++ + + D G + Sbjct: 136 IFGYVTTKKSGTTFAMITLGIGEMVFASALMFPDFFGGEGGVSTNRSIGDALAGVTFGPA 195 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 +YY++ C +S +++ +T + +RDN + + + +S+ Sbjct: 196 RQVYYLIAAWCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRFLVVILSAF 255 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G+AGA + + ++ + + V+ +GGM S + + G Sbjct: 256 FAGIAGALSCINFEIVTAENVSAVRSGSVLLAAFIGGMGSFFGPIIGAVLTVFFTVALSG 315 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + L F M + L + + + Sbjct: 316 ITKAWLLYLGLFFVLMVMYAPGGIASLLVMHLPILRRG 353 >gi|83311127|ref|YP_421391.1| ABC-type branched-chain amino acid transport system [Magnetospirillum magneticum AMB-1] gi|82945968|dbj|BAE50832.1| ABC-type branched-chain amino acid transport system [Magnetospirillum magneticum AMB-1] Length = 329 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 58/315 (18%), Positives = 112/315 (35%), Gaps = 19/315 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ S+ I +L+ ++++G G SL + +GAY+ L YG W+ Sbjct: 29 DYVLSILITVLLQAYLGMSWNVMMGFAGQFSLGHALYVGLGAYAGGALFVHYGTPPWIGA 88 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +S A G ++G +F+ + A L ++ ++ G + Sbjct: 89 LAGMAVSAAVGAVVGTLGFRFKVMGVYFALLTIAFAEFTRVLFDHWGWVGASSGLFLPPA 148 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 YYV L M + L I W+ IR++ Sbjct: 149 PNNSPD---------NLWLLRGSTTMFYYVALAMAAGAFWFSRALLMRRIGFYWQAIRED 199 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIVIL 275 Q A +L + K+ A +S++ + G F A + + P+ F +I ++ I+ Sbjct: 200 QDAADALGIDVFKNKMIAVLISASMTSLGGVFLAFFNNNLYPESIFSMHRSIELMLGTII 259 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ +L +L + E ++L + I L L+++++ Sbjct: 260 GGIGTLFGPILGAVVLTALGEGL---------TILGAHIGIDGVKQIAYGICLMLILVLK 310 Query: 336 SHSLLRLRTPSNFLE 350 L + LE Sbjct: 311 PGGLWPWLRKAFRLE 325 >gi|254706462|ref|ZP_05168290.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella pinnipedialis M163/99/10] gi|261313914|ref|ZP_05953111.1| predicted protein [Brucella pinnipedialis M163/99/10] gi|261302940|gb|EEY06437.1| predicted protein [Brucella pinnipedialis M163/99/10] Length = 570 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFYMVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFANDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|108758901|ref|YP_634781.1| branched-chain amino acid ABC transporter permease LivH [Myxococcus xanthus DK 1622] gi|108462781|gb|ABF87966.1| branched-chain amino acid ABC transporter, permease protein LivH [Myxococcus xanthus DK 1622] Length = 306 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 91/307 (29%), Gaps = 17/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 + + IY + A G ++V G L L++ +G Y+ R S L Sbjct: 8 LINGLAAGTIYALVALGYTMVYGVLKLINFAHGDVMMVGVYMGYATAFALGRDMRSSLLG 67 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + V ++ ++G +F L + + I + ++ Sbjct: 68 VAVVFAVAMLGCALLGFLIERFAYRPLREKPRLTALITAIGISFALSYGFQLDLGFLPGA 127 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 V + + V+ + L + + RT A R + Sbjct: 128 APRAFPEVIEPVEWLVIGDRDVVVWNWQVISFGIAVALMVGLQYLVFRTRFGRAMRAVSW 187 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + F +SSA AG +A +SP M + ++ Sbjct: 188 DHRVAALMGIPTDRVIALTFMLSSALAAGAGLLYAIKDTSVSPLM-GLYVGLKAFVAAVI 246 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ + +L V E G + + F L LV+L++ Sbjct: 247 GGIGHVPGAVVGGLVLGLVEEFVVGYAASTWRDAVAFGF-------------LILVLLVK 293 Query: 336 SHSLLRL 342 L Sbjct: 294 PGGLFGR 300 >gi|302669705|ref|YP_003829665.1| branched-chain amino acid ABC transporter permease LivH [Butyrivibrio proteoclasticus B316] gi|302394178|gb|ADL33083.1| branched-chain amino acid ABC transporter permease protein LivH [Butyrivibrio proteoclasticus B316] Length = 295 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 100/308 (32%), Gaps = 24/308 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y S IY + A G ++V G +L+ +G Y + + + I Sbjct: 6 TYFISGLSLGSIYAIIALGYTMVYGIAKMLNFAHGDFIMVGCYIIFSVSGALSGNSLVGI 65 Query: 97 PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 V+ ++ G+ + RG +A LI + L + G Sbjct: 66 LVAIVLCTLLGITTEFVAYRPLRGATSPLAVLITAIGVSYFLENVALLIFGADIKSFTSV 125 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + G T + + ++ + + ++ +T A + + Sbjct: 126 IKWEGLTFAD---------GNLRIQGVTIITIVISIIVLIVLEAFINKTKQGQAMLAVAE 176 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + + FA+ SA +AGA ++ +SP I +L Sbjct: 177 DKGAAALMGINVNKTIMLTFAIGSALAAVAGALLCSAYPSLSPYT-GAMPGIKAFVAAVL 235 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ +L V L + + F L +V+L++ Sbjct: 236 GGIGSIPGAMIGGLVLGIVEILSKTYISSQLSDAIVFG-------------ILVIVLLVK 282 Query: 336 SHSLLRLR 343 +L + Sbjct: 283 PTGILGKK 290 >gi|239832608|ref|ZP_04680937.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301] gi|239824875|gb|EEQ96443.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301] Length = 329 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 131/337 (38%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ L + +++L + +FA ++++G G+LS + Sbjct: 23 LSAVILGIALVGLLAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 78 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G++ L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 79 GGAAYITAHTVKVWGVTPELGLVLGVLAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 138 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F + + MYY +L + L Sbjct: 139 FFCLQASFTHG--------------EDGLQGVPRGHLFGIIDLNQPMTMYYFVLAVFVLG 184 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +I + + +++R+N+ SL ++ KL+AF +S+A G+AG A Sbjct: 185 VFVIWRIINSPFGMILKSVRENENRAISLGYSVNRYKLAAFVMSAALAGLAGGLKALVFQ 244 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 245 FATLTDVGWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNYLATSDFPV--------- 295 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S +R Sbjct: 296 ------TIVTGVIFMACVLLFRKGIIGEFYASRLGKR 326 >gi|146337631|ref|YP_001202679.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146190437|emb|CAL74436.1| putative branched-chain amino acid ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 356 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 114/322 (35%), Gaps = 13/322 (4%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---R 87 ++ +I I+ +++G G +S + Y IG+Y+ I Sbjct: 29 PFIFPGAKALNVAAKICIFAALVASYDLLLGYTGSVSFAHTMFYGIGSYAIAIALYGLGP 88 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 S+ + + ++ + +GL SL+ + A+ TL ++ F + + +T G+ Sbjct: 89 NWTSVAVAVAAGLPLALLLALAIGLFSLRVEAIFFAMITLAIASAFLVLASQLSWLTGGE 148 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G +TV +F FP + I YY++L C L +L + + Sbjct: 149 DGRSFQLPELLRPSTVFIGKEWFGFPING---RILTYYLVLSACALMILALLRVVNSPFG 205 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSEN 266 + IR+N+ +L +F A +++ AG A PD FS Sbjct: 206 RVLQAIRENRFRAEALGYRTVFHLTYANCIAAVIAACAGMLNALWLRYAGPDTSLAFSIM 265 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF------NMRH 320 + ++ +V++GGM ++ AI I + ++ R Sbjct: 266 LDILLMVVIGGMGTIYGAIIGAAIFILAQNYLQALMGIASSAAADAGLPLLPGLLHPDRW 325 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 + + + ++ Sbjct: 326 LLWLGLLFIASVYFFPTGVVGR 347 >gi|92119106|ref|YP_578835.1| inner-membrane translocator [Nitrobacter hamburgensis X14] gi|91802000|gb|ABE64375.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Nitrobacter hamburgensis X14] Length = 315 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 117/324 (36%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A+V L+ L + GI L+ + A G +I+ G G S + Y +G Sbjct: 6 IALVVAALVVLAAVPWFGSDVLIQFGINALLLAVLAQGWNIIGGYTGYASFGNSVFYGLG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +Y I +++ L + + ++ +++G+P L+ RG Y AIATL ++++ I+ Sbjct: 66 SYGVGIAMAQWHLPFGVGLAFGVALAVTFAVLLGIPVLRLRGHYFAIATLALAQVMIAIV 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + + Y + LG+ L+ Sbjct: 126 SN-----------------------VTLAGQNIGLVLPPLNNDPLFYELSLGLLVLATLT 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + WL R+ +R+N++ + K AFA+S F +AG A I Sbjct: 163 VFWLTRSRFGFGLIAVRENEEGAEVMGVNTTLYKTMAFALSGVFCSLAGGIHAYWVTFID 222 Query: 258 PDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ F S N+ +I + + GG ++ L + E Sbjct: 223 PESAFDISLNVKMIIMAVFGGPGTILGPVVGALSLSAISEFLSS--------------EI 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 + I + +++ L Sbjct: 269 TSLASLFFGIVVVAAVVLMPRGLA 292 >gi|121611807|ref|YP_999614.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121556447|gb|ABM60596.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 351 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 96/339 (28%), Gaps = 27/339 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + LLL + + ++ + L + A G+ + G G+LSL + + + Sbjct: 13 LAGMAAVLLLLAVVLPATLDPFRLNLVSKYLAFAFVAVGVVLTWGYGGVLSLGQGMFFGL 72 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y + + L + +A + + Sbjct: 73 GGYMMAMFLKLEASAPELPDFMVWSSVEQLPWWWIPFHSLGWTVAGILAIPAVLAYLFSY 132 Query: 137 LIKWKPITNGKAGIYV-------------ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 I + ++ I + + + M Sbjct: 133 AIFKRRVSGVYFAIVTLSLALALTVVVVGQQGETGGANGITDFRTLLGRDITGDDAKRVM 192 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y+V + L ++ L + R+ IRD + K FA+++ Sbjct: 193 YFVEVLAIALVMAVSLVIVRSRFGKILIAIRDKEDRVRFSGYDTAHMKAFVFALAAVLSA 252 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 + GAF++ I+P + ++ ++ +GG S+ ++ + Sbjct: 253 IGGAFYSLQVGLIAPGVIGVVASVEMVIYAAVGGRLSIPGAVIGALLIGFLKSYLSE--- 309 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F + LV+ + L L Sbjct: 310 -----------TFPEGWLYFLGAVFILVVWAMPNGLAGL 337 >gi|42524745|ref|NP_970125.1| branched-chain amino acid ABC transporter, permease protein [Bdellovibrio bacteriovorus HD100] gi|39576955|emb|CAE78184.1| branched-chain amino acid ABC transporter, permease protein [Bdellovibrio bacteriovorus HD100] Length = 300 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 84/303 (27%), Gaps = 17/303 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L +++ Y +GA++ G+ Sbjct: 8 LINGVSLGSIYALIALGYTMVYGILKMINFAHSDVYMVGAFAAYYFARWLGIENNPGFST 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + L L + N+LI ++ Sbjct: 68 LLTLIVITMICCSLLGLVIERLAYRPLR---NSPKLNVLITAIGVSLFLQYSGQVVFGAD 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F F V F VL + L +T + A R + N Sbjct: 125 PKVFPEVMKDFVIFSIGIVEVRSFDVTVLGVGIVAMLGLQFLLFKTKMGRAMRAVSANPM 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F V S+ G+ +I P M + +LGG+ Sbjct: 185 VASLMGVNPDRIIAFTFVVGSSLAGIGSVLVGMKYPKIDPLM-GMMIGMKAFVAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ I+ E+ + L F L ++++ + Sbjct: 244 GNVGGAVLGAMIMGLSEEMVVAYLSSTYRDALAFG-------------ILIVILIFKPAG 290 Query: 339 LLR 341 LL Sbjct: 291 LLG 293 >gi|159043412|ref|YP_001532206.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12] gi|157911172|gb|ABV92605.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12] Length = 324 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 104/292 (35%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 A+ LL + + ++ ++ I + GL++ +G G++SL + + Sbjct: 6 WINFAIALGLLAVPLWAWVADEPFTITLATRVAILALAGVGLNLALGLGGMVSLGHALFF 65 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IG Y+ IL L+ + ++ L ++ + Sbjct: 66 GIGGYAMGILAHHAQTFDPLMEAPFVIEGTKSMPVIWLTAMALSALAALAVGALSLRTTG 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + G S+ FP + I + + G+ L+ Sbjct: 126 VYFIMITLAFGQMFYYFAISWPAYGGEDGLSIYVRNGFPGLNTLDPIQFFLLCYGLLLLA 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + + A T R +L + +L AF +S A G+AGA FA Sbjct: 186 LFVCARITASPFGLALSTARQAPARAETLGFSPFRLRLIAFTISGAITGLAGALFADLNR 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +SP MF + + ++ VILGG+ L A+ I + G++ Y+ Sbjct: 246 FVSPAMFSWHTSGEIMVFVILGGVARLFGPVAGAALFILLEHWLGGLSEYWL 297 >gi|6996599|emb|CAB75549.1| integral membrane protein [Rhizobium leguminosarum bv. viciae] Length = 300 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 95/304 (31%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +G ++ +I+ L Sbjct: 8 LLNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++ ++ + + +A L S ++ I V Sbjct: 68 VLLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSITLSNFIQVTQGPRN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +++ L + RTA+ A R ++K Sbjct: 128 KPI---PPMVSSVYQFGNISVSLKQIIIIVITAVLLTIFWYIVNRTALGRAQRATEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + S + F+ + + +LGG+ Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASFND-GFTPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L V++ + Sbjct: 244 GSLPGAVFGGLLIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|53725043|ref|YP_102636.1| branched-chain amino acid ABC transporter permease/ATP binding protein [Burkholderia mallei ATCC 23344] gi|52428466|gb|AAU49059.1| branched-chain amino acid ABC transporter, permease/ATP binding protein, putative [Burkholderia mallei ATCC 23344] Length = 761 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 16 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 75 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 76 GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 135 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 136 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 183 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 184 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 243 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 244 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 292 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 293 ----LLYLGLLFVAVVLAAPGG 310 >gi|322368598|ref|ZP_08043166.1| branched-chain amino acid ABC transporter permease protein [Haladaptatus paucihalophilus DX253] gi|320551882|gb|EFW93528.1| branched-chain amino acid ABC transporter permease protein [Haladaptatus paucihalophilus DX253] Length = 336 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 104/338 (30%), Gaps = 17/338 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + L FL + + +YVM A GL+++ G +G+L+ Sbjct: 3 LVPLAGVGSALGDFLRPSTLASVFIQGLAKAALYVMIASGLTLIFGLMGVLNFAHGSLTM 62 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY ++ + + I A+ A ++ L + + + + Sbjct: 63 LGAYLGGLVMVAFVAAGGSSITRLALFFVAVVVVFALLAGLGTAVEVGLIRKLYDRPPVY 122 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM---------YYV 186 ++ +T + L++ F F+ +I + + Sbjct: 123 QILLTFGLTLVLNELVRIAVLFYGMQPQTDWQDAFGTKPGFLTNQIGLGSVSVNGLALFE 182 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + A I +L RT R ++ + +L + FA+ + G+AG Sbjct: 183 IAFGVLTVAGIWAFLTRTRYGLVIRAGSEDAEMTEALGIDVRRVFTVVFALGTGLAGIAG 242 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + + +VI+GG+ + A ++ V Sbjct: 243 VLLMWDPKWGASVPVASEALLPAFVVVIVGGLGTFRGTVVAALLVGMVDAAMS------- 295 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 F + + L +V+++R L + Sbjct: 296 -WWFVNAIDFAGLPEMTIFLILVVVLILRPQGLFGVEE 332 >gi|217423750|ref|ZP_03455251.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 576] gi|217393608|gb|EEC33629.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 576] Length = 776 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|126731597|ref|ZP_01747402.1| ABC branched chain amino acid transporter, inner membrane subunit [Sagittula stellata E-37] gi|126707763|gb|EBA06824.1| ABC branched chain amino acid transporter, inner membrane subunit [Sagittula stellata E-37] Length = 331 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 91/273 (33%), Gaps = 11/273 (4%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-YGL 90 + + LI +FA +++ G GL S +AIGAY + L Sbjct: 30 PDLLNPGLLFIVGMTLIQSIFALSWNLLFGFTGLASFGHAGFFAIGAYFTGAALRYDFPL 89 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 ++++ ++ + +I+G+ +LK + + +I + P + G+ Sbjct: 90 PFFVVLAIAGLGGALVALIIGVVALKRLTGIFLAVLTVALTEALSKIISFTPALGEQDGL 149 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + Y L+ L + + + + + + Sbjct: 150 GSIPRPIIDLGLFQMDLTHVND----------YYRFLVVASVLIIAGLWCVVHSRLGRTF 199 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 IR++ + + ++ +F +S +AGA A ++ D + + I Sbjct: 200 CAIREDADRARFVGINVARFRVISFMISGGTAALAGALSAPWTRIVTLDQVNWLASTQPI 259 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 +LGG TS +A + Sbjct: 260 LNSLLGGFTSFWGPIVGSAAFSVISHWTRPFPG 292 >gi|219848760|ref|YP_002463193.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485] gi|219543019|gb|ACL24757.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485] Length = 388 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 106/347 (30%), Gaps = 24/347 (6%) Query: 15 LCLLAVVYPLLLFLFLG------ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 L LL +V+ L+L + I ++ ++ A G ++V G L ++ Sbjct: 41 LALLVIVFALILSPSQPDIMQRVTIILPQVIIDGLVRGFLFATIALGYTMVYGVLEFINF 100 Query: 69 NCVIAYAIGAYSYV-----------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + IG + + + L++ V+ G + + + + Sbjct: 101 AHGEIFMIGGVVGATVSFILVSSGTLNSIPPLVFVLLVVLVAMAFCGTLAVTVERIAYRP 160 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPI--TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + LI + IL + TN G + G ++ S Sbjct: 161 LRNAPRLVPLISAIGMSLILQDLARLVMTNTPLGFNARYQTPDFGPPIQLFTMQVGERSV 220 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 VI ++ + + + T + A R + + + F Sbjct: 221 PVILSPRDLIFIVTATLMLIVLNYVVNVTKLGKAIRATAQDMPTASLMGIDVNRIIALTF 280 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 + A G AGA F ++P M + + +LGG+ +++ +L + Sbjct: 281 LIGGALGGAAGALFGLRIGTVNPYM-GLIPGLKAFTAAVLGGIGNITGAMVGGIVLGFLE 339 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + S L L+++ R LL Sbjct: 340 AFVAAYLSIFTAG----NFSGAAYADIAAFSILILLLIFRPSGLLGE 382 >gi|126434914|ref|YP_001070605.1| inner-membrane translocator [Mycobacterium sp. JLS] gi|126234714|gb|ABN98114.1| urea ABC transporter membrane protein [Mycobacterium sp. JLS] Length = 367 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 107/357 (29%), Gaps = 35/357 (9%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M F R + +++ + + + + + L + + A G+ + Sbjct: 1 MRTFVGRWQTWAGFGVAALLLFAVAPAVL------SDFRLGLLGKFLCFAIVAVGIGLAW 54 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---------------WLLIPVSAMISGA 105 G G+L L + + +G Y + + L + S A Sbjct: 55 GRGGMLVLGQGVFFGLGGYMMGMHLKISDAQLRGDDVPDFMQIAGVRELPGYWAPFASPA 114 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 ++ + L I + + A + V + + Sbjct: 115 FTLLAIVVIPTGIAAVLGFGVFKRRVKGAYFAILSQALAAALAILLVGQTGLGGSNGLTN 174 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 FF F + + + +Y++ + + +++ L ++ +RD ++ L Sbjct: 175 FRTFFGFALNDPVNKQMLYFIAAAVLLIVVAVVRQLMQSRYGELLVAVRDGEERVRFLGY 234 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 K+ A+ V++ +AGA FA ++P +I + V +GG T+L Sbjct: 235 DPANIKVVAYTVAALCASIAGALFAPIVGFMAPSQVGILPSIAFLIGVAIGGRTTLLGPV 294 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L F F + +V+ L L Sbjct: 295 LGAIGVAWAQTL--------------FSERFPSEWIYAQGLLFIVVVGFFPAGLAGL 337 >gi|283785218|ref|YP_003365083.1| branched-chain amino acid transport system, permease component [Citrobacter rodentium ICC168] gi|282948672|emb|CBG88264.1| putative branched-chain amino acid transport system, permease component [Citrobacter rodentium ICC168] Length = 524 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 35/288 (12%), Positives = 74/288 (25%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAY ++ + + + + Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYCTWMVQQTMAQLAPQWLAFYPLFALPVAFLFTAVVGMI 310 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + + L + + + Sbjct: 311 LER--GVIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPPWLSGGVQVYAGL 368 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + VL + L L +T + R + N+ + AF + Sbjct: 369 VLPWNRIVVLGFTLLVLFFTWLVLNKTRLGLRVRAVTQNRSMAACCGVPTGRVDMLAFGL 428 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ I +V+LGG+ L+ A L ++ Sbjct: 429 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGVFNKI 486 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 ++ R L L+ Sbjct: 487 LEPQMGAVLGKIVILLLIILFIQK-------------RPQGLFALKGR 521 >gi|241206018|ref|YP_002977114.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859908|gb|ACS57575.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 300 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 95/304 (31%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +G ++ +I+ L Sbjct: 8 LLNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++ ++ + + +A L S ++ I V Sbjct: 68 VLLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSITLSNFIQVTQGP-- 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +++ L + RTA+ A R ++K Sbjct: 126 -RNKPIPPMVSTVYQFGNISVSLKQIIIIVITAVLLTIFWYIVNRTALGRAQRATEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + S + F+ + + +LGG+ Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASFND-GFTPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L V++ + Sbjct: 244 GSLPGAVFGGLLIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|332716849|ref|YP_004444315.1| branched chain amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] gi|325063534|gb|ADY67224.1| branched chain amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 335 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 126/334 (37%), Gaps = 33/334 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + ++ L + + ++ + + +FA ++++G GLLS + Sbjct: 28 VLILAGLAVLIAAPMFVYPIFLMKLL----CFALFACAFNLLIGYTGLLSFGHAAFFGGA 83 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY +G++ + + + + G+++G +++ +G Y A+ TL +S++F Sbjct: 84 AYFTAYSVKEWGVTPEIGLLIGMAGAALLGLVIGFFAIRRQGIYFAMITLALSQMFYFFC 143 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 ++ ++ + R F + + +YY +L L+ + Sbjct: 144 LQA--------------PFTHGEDGLQGVPRGHLFGLLDLNAPLNIYYTVLAAFVLALLV 189 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I + ++IR+N++ SL ++ KL AF +S+A G+AG A + Sbjct: 190 IWRFVNSPFGMILKSIRENEQRAISLGYSVQRYKLGAFVMSAALAGLAGGLKALVFQFAT 249 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + + VI + +LGG+ ++ +++ + +F Sbjct: 250 LTDVAWQMSGEVILMTLLGGIGTMIGPIFGAGLVVALQNYLATSDFPV------------ 297 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ L+ S + Sbjct: 298 ---TIITGLVFMACVLVFRRGLIGEFYASRLGRK 328 >gi|254297893|ref|ZP_04965346.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 406e] gi|157807458|gb|EDO84628.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 406e] Length = 758 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|254261970|ref|ZP_04953024.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 1710a] gi|254220659|gb|EET10043.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 1710a] Length = 746 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|323141503|ref|ZP_08076391.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Phascolarctobacterium sp. YIT 12067] gi|322414019|gb|EFY04850.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Phascolarctobacterium sp. YIT 12067] Length = 296 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 97/303 (32%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G + L++ Y +GAY ++ GL I Sbjct: 12 LINGVSLGSIYALIALGYTMIYGIIKLINFAHGDIYMLGAYFGFFATTQLGLPFIPAIIF 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+I+ + + + IA LI + L + + Sbjct: 72 SMAGAAIAGIIIERVAYRPMRNAPRIAILITAIGVSFFLE-----------YSMILLVSP 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T ++ + ++ +LL L A + + +T A R + + Sbjct: 121 QPRTFPAVFGATVYHLGPLVANSQQLVILLSAIILMAVLTYIVNKTKAGKAMRAVSYDAD 180 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I + FA+ SA G + I P M + +LGG+ Sbjct: 181 AARLMGINIDRVISTTFALGSALAAAGGVLVGVYYNSIDPLM-GMMPGLKAFVAAVLGGI 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + IL V + G F F L +++L + Sbjct: 240 GIIPGAMIGGIILGVVEAMVSGYISSTFRDAAAFG-------------ILIIILLYKPSG 286 Query: 339 LLR 341 LL Sbjct: 287 LLG 289 >gi|307316761|ref|ZP_07596203.1| urea ABC transporter, permease protein UrtC [Sinorhizobium meliloti AK83] gi|306897383|gb|EFN28127.1| urea ABC transporter, permease protein UrtC [Sinorhizobium meliloti AK83] Length = 391 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 106/351 (30%), Gaps = 35/351 (9%) Query: 13 KILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 IL LAV+ P L L Y+ S+ + L Y + A L +V G G+LSL Sbjct: 19 AILLALAVIVPALNLLTAPEHPLHVPTYLVSLFGKYLTYALLALALDLVWGFCGILSLGH 78 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +A+G Y+ + R + LP + D A L++ Sbjct: 79 AAFFALGGYAMGMYLMRQIGARGSYGNPLLPDFMVFLNWKELPWFWYGFDMFWFAALMVV 138 Query: 131 EIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFR 171 + + + + D + + Sbjct: 139 LVPGLLAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILG 198 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F ++ +S + + R+ +RD + L + K Sbjct: 199 FNIQADGTRAALFAASALALAVSLVVTSGIVRSKFGKVLVALRDAESRTRFLGYRVEHMK 258 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L AF VS+ G+AGA + I+P F + +I V+ +GG +L ++ Sbjct: 259 LFAFTVSAMMAGVAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAILV 318 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G + F +F + LV L ++ Sbjct: 319 NGGKSI--------------FTAAFPEFWLFALGGLFVLVTLFLPKGVVGT 355 >gi|294341742|emb|CAZ90167.1| putative Urea ABC transporter, permease protein UrtC [Thiomonas sp. 3As] Length = 377 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 93/327 (28%), Gaps = 29/327 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---- 86 + +Y + +IL Y M A + +V G G+LSL + +A+G Y+ + + Sbjct: 56 SSLHLSQYWVGLSGKILCYAMVALAMDLVWGYAGILSLGHGLFFALGGYAMGMYLNRAMN 115 Query: 87 --------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---QN 135 W P + + + L Sbjct: 116 AASGNLPDFMQFMQWTHFPWYWVGTEHFAWALFLAVAAPGLLAFIFGFFAFRSRIKGVYF 175 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +I + + + + FP + ++ L Sbjct: 176 SIITQALTYAAMLLFFRNETGFGGNNGLTDFKVLLGFPMGTAGMTVSLFVASSLTLVLMF 235 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 WL R+ +RD + ++ KL + +S+ G+AGA +A Sbjct: 236 LFSRWLVRSKFGRVLTAVRDAESRVMFCGYNPLWFKLGVWTISAMMCGIAGALYAPQVGI 295 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 I+P S +I + +GG +L ++ + Sbjct: 296 INPSEMSTSNSIEIAIWTAIGGRGTLIGPIVGAVLVNVAKSWLT--------------VA 341 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ +V L + ++ L Sbjct: 342 MPQVWLYVLGGLFIVVTLYAPYGIVGL 368 >gi|317048653|ref|YP_004116301.1| inner-membrane translocator [Pantoea sp. At-9b] gi|316950270|gb|ADU69745.1| inner-membrane translocator [Pantoea sp. At-9b] Length = 304 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 87/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I P+ Sbjct: 9 LVNGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLGLLSFFGIHSFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ + + I + Sbjct: 69 LIFGTLIFTIVVTAVYGWTIERIAYRPLRNSTRLAPLISAIGMSLILQNYVQLSQGPNQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ S + V ++L+ A + ++ T + R ++ +++ Sbjct: 129 GIPTLMSGVLRMEIDGGVVQITWTKVFILIAALAGMALLTWIIQYTRLGRICRAVQQDRR 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A G+AG + F I + +LGG+ Sbjct: 189 MAAILGINTDRVISLVFMIGAAMAGLAGVLVTMNYGTFDFY-IGFVIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L G+ + + F L ++++ R Sbjct: 248 GSLPGAMLGGLLLGVAEAQFAGLVNSDYKDVFSF-------------ALLVVILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|87301713|ref|ZP_01084553.1| putative membrane protein of urea ABC transport system [Synechococcus sp. WH 5701] gi|87283930|gb|EAQ75884.1| putative membrane protein of urea ABC transport system [Synechococcus sp. WH 5701] Length = 368 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 99/338 (29%), Gaps = 32/338 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L + LF+ + ++ + + A + ++ G GLLSL I +++G Y+ Sbjct: 11 ILLAVALFILPAGLDDFRLNLFGRYFALAITALAIDLIWGYTGLLSLGQGIFFSLGGYAV 70 Query: 82 VILGSRYGLSIW-------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + S+ P ++ A + + Sbjct: 71 AMYLMLNTKSLAGGNGIPKFFENYGVAELPFFWKPFWSPVFTLIAIWVIPAVVAGVVGWL 130 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTV-----------RSLIRFFRFPSSFVIYEIFM 183 + K + + S + F +++ Sbjct: 131 IFRNRIKGVYFSIITQAALMVFFHFFNGQQKLFDGTNGLKTSTSQLFGQLVGSPDMQVWF 190 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 Y + + + ++ I + +A IRD++ F + K F V+ A G Sbjct: 191 YRLTVILLPIAFLICRYFTSGRFGDALIAIRDDETRFRFAGFNPVPFKTIVFLVAGALCG 250 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 ++GA + +SP S +I ++ V +GG +L ++ + L Sbjct: 251 ISGALYTVQSGIVSPQYMSISFSIEMVIWVAVGGRGTLVGPIIGATLVNYLRSLVSE--- 307 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + V+++ + Sbjct: 308 -----------ALPEAWLFVQGALFIFVVVLMPDGIYG 334 >gi|251767463|ref|ZP_02267366.2| ABC transporter, permease/ATP-binding protein [Burkholderia mallei PRL-20] gi|243062677|gb|EES44863.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei PRL-20] Length = 752 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|121599860|ref|YP_992770.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei SAVP1] gi|121228670|gb|ABM51188.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei SAVP1] Length = 755 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|227432535|ref|ZP_03914519.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351713|gb|EEJ41955.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 266 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 90/284 (31%), Gaps = 25/284 (8%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 +V G + L++ Y +GAY L+ ++ + ++ +S G+++ + + Sbjct: 1 MVYGIIKLINFAHGDIYMLGAYFGYFFIKVLHLNFFIALILAMAVSAIIGVVIEYIAYRP 60 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 IA LI + +L G + + + Sbjct: 61 LRHSPRIAVLISALGISFLLENGMTYLYGSDQRSFPKAIKTVQYHFYG-----------I 109 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + + L + ++ T + A R + + A + I FA+ Sbjct: 110 QVSNIQLIIAVTSIVLMLLLTYIVKNTKMGRAMRAVSADPDAASLMGININHTISFTFAI 169 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 SA G + I P M + + +LGG+ + A ++ + + Sbjct: 170 GSALAAAGGVLIGLYYNSIDPLM-GMTPGLKAFFAAVLGGIGIIPGAAVGGWLIGILETM 228 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +F+ ++ L +++L++ +L Sbjct: 229 VQ-------------ATAFSDYKDAIVYAMLIVILLIKPTGILG 259 >gi|254197595|ref|ZP_04904017.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei S13] gi|169654336|gb|EDS87029.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei S13] Length = 780 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 16 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 75 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 76 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 135 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 136 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 183 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 184 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 243 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 244 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 292 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 293 ----LLYLGLLFVAVVLAAPGG 310 >gi|239623158|ref|ZP_04666189.1| ABC branched chain amino acid family transporter [Clostridiales bacterium 1_7_47_FAA] gi|239522525|gb|EEQ62391.1| ABC branched chain amino acid family transporter [Clostridiales bacterium 1_7_47FAA] Length = 297 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 114/305 (37%), Gaps = 21/305 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Q IY + A G S++VG +G+++ IGA+S + +G ++ L I Sbjct: 10 LVNGLCQGAIYALMAIGYSVIVGVVGMVTFTYGEIMMIGAFSSYYIFLLFGNNLPLAILA 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + S G+++ + + +L+ + ++ I G V D Sbjct: 70 AFTGSFLIGIVVYKLCYEKFFNAPRHISLLCTIGISMLIKNLAQIVFGPETKPVLD---- 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + S + ++ V++ + L++++ L+ +T A R + N+ Sbjct: 126 ---IVENKTFTLMLGSVRLDIKLLQIVVIVLVVVLASALTLFFNKTKWGIALRAVSQNKD 182 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + + + S F G+AG +S M ++ + +LGG+ Sbjct: 183 AAYLVGINVKRTAMIGNCIGSGFGGIAGILLCIYYYSVSATMGGI-YSMKAFAASVLGGL 241 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A + + L ++ F + F L LV+L+R Sbjct: 242 VDIRFSALGGLCIGVIENLGIAVSAATFRDVFAFGF-------------LILVLLIRPQG 288 Query: 339 LLRLR 343 + + Sbjct: 289 FVSKK 293 >gi|237817539|ref|ZP_04596529.1| branched-chain amino acid ABC transporter, ATP-binding/permease protein [Brucella abortus str. 2308 A] gi|237787294|gb|EEP61512.1| branched-chain amino acid ABC transporter, ATP-binding/permease protein [Brucella abortus str. 2308 A] Length = 583 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 37 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 96 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 97 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 146 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 147 ----------FPGQTSFTQVARPDLFANDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 196 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 197 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 256 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 257 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 304 >gi|239817265|ref|YP_002946175.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239803842|gb|ACS20909.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 337 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 118/325 (36%), Gaps = 26/325 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 +L+ + L A + + +FA LS+V+G G+ +L Y GAY Sbjct: 26 LVLMLVGLLAFVLFPQDLGLLTNMATMSIFALSLSLVLGQAGIATLGQAALYGSGAYVAG 85 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + + + G ++ G L+ L + T+ ++++ + + Sbjct: 86 WTALYLTADPIVGLLLGGLGGGVIALLSGAVMLRSTKLTLVMLTIAVAQLLLELANWARW 145 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ + LG + + + Y+ LG L ++ L Sbjct: 146 LTGGDDGLAGFNIGPLLGIWEFNFLSYTG------------YFYALGALVLVYFLLRNLV 193 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + R IR + +L + L+ + V G+AGA A + + M Sbjct: 194 ESPFGLTARAIRQDPGRVQALGGRVYLHLLAVYTVGGIVAGLAGALTAQTSKVANLFMLD 253 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F+ + V+ +++LGG LS T + + + +N Y++ Sbjct: 254 FTTSAGVVVMIVLGGTRRLSGAVLGTVAYMTIHHIASTLNPYHW--------------LF 299 Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347 + L +V+++ L+ L + Sbjct: 300 FIGSMLIVVLIVLPEGLIGLVDRTV 324 >gi|148557938|ref|YP_001258026.1| branched chain amino acid ABC transporter permease/ATP-binding protein [Brucella ovis ATCC 25840] gi|148369223|gb|ABQ62095.1| branched chain amino acid ABC transporter, permease/ATP-binding protein [Brucella ovis ATCC 25840] Length = 570 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|115523669|ref|YP_780580.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115517616|gb|ABJ05600.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 305 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 104/312 (33%), Gaps = 28/312 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90 + + + IY + A G ++V G +G+++ + IG + +I + + Sbjct: 8 LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFVALISFLILVSFGLTFVPV 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ VS I+ G + + + +A ++ + +L+ + + G Sbjct: 68 ILLIVLLVSMAITALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLMNYSQVAQGARVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V + T S F S+ I + VLL A + RT + Sbjct: 128 PVPPIITGGYTLHESADGFNVQLSNVQIVVVITTVVLL------AIFTWLVSRTRLGRDM 181 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +Q L + F + +A +AG + + M F I Sbjct: 182 RACEQDQTMAALLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFM-GFVAGIKAF 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL ++ + L + + F L + Sbjct: 241 TAAVLGGIGSLPGAMLGGLLIGLIETLWSAYFSVEYKDVAAFS-------------ILVV 287 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 288 VLIFLPTGLLGR 299 >gi|229069506|ref|ZP_04202795.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus F65185] gi|228713645|gb|EEL65531.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus F65185] Length = 298 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 119/304 (39%), Gaps = 31/304 (10%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPV 98 M QI I+ +FA +++G G++S + + IGAY + + + I Sbjct: 1 MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++S I+GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 YYV ++ +++I + I N++ Sbjct: 121 RDRF-------------------TFYYVSFVCLCFIFILLRLFTKSSIGKVLKAISQNEQ 161 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L ++ K+ A V+ ++G F + ++ +F + + + ++GG+ Sbjct: 162 RVEALGYKVLPYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L + + Y+ S L + R T ++ + +V+L+ Sbjct: 222 GTLI---------GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKG 272 Query: 339 LLRL 342 L+ Sbjct: 273 LVGT 276 >gi|86747270|ref|YP_483766.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86570298|gb|ABD04855.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 311 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 64/326 (19%), Positives = 133/326 (40%), Gaps = 32/326 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L+ + Y +G +Y + A ++V G G S + GA Sbjct: 6 IALLVLIACVAALPLFGGAYALRLGTIACMYAVLALSWNVVGGFAGYPSFATAAFFGFGA 65 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y +L + V+ +++ + +G L+ RG Y AIA+L ++E+ + ++ Sbjct: 66 YCGGVLMGKGFPLW-AAAAVAGLLALVSAVALGAVLLRLRGHYFAIASLSLAEVLREVVN 124 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G G+ + + + F +Y + G+ ++A ++ Sbjct: 125 NATDLTGGGMGLNIPLAS----------------GAGVMAEATFFFYAMWGVMLITALMV 168 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + + + A IR N+ A + AK AF +S+ F+ +AG +AA I P Sbjct: 169 IVVANSKLGFALNCIRQNETASSMVGLNTTLAKSIAFGLSACFVSVAGGIYAAWVHYIDP 228 Query: 259 -DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 D+F ++ I + ++GG+ S +A + +G+ E+ ++ Sbjct: 229 SDVFDILYSVKPIVMALMGGLGSPLGVACGAFMYLGLEEVV--------------WRNYT 274 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343 HT ++ + + +++L H L LR Sbjct: 275 HIHTGVLGVLIVMLLLFLPHGLSSLR 300 >gi|126454727|ref|YP_001065943.1| ABC-transporter [Burkholderia pseudomallei 1106a] gi|242316817|ref|ZP_04815833.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 1106b] gi|126228369|gb|ABN91909.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 1106a] gi|242140056|gb|EES26458.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 1106b] Length = 746 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|328545453|ref|YP_004305562.1| branched-chain amino acid ABC transporter (permease protein); livH-like protein [polymorphum gilvum SL003B-26A1] gi|326415194|gb|ADZ72257.1| Putative Branched-chain amino acid ABC transporter (Permease protein); livH-like protein [Polymorphum gilvum SL003B-26A1] Length = 290 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 94/307 (30%), Gaps = 26/307 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + +Y + A GL+++ G L +++ IG Y+ L +R+G+ ++ + Sbjct: 9 PSLLNGLTTGALYALVALGLTLIYGVLHIINFAHGALLMIGLYAVYFLNARFGIDPYVAL 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + A G + + G L+++ ++ Sbjct: 69 LIVPPALFALGYALQRGIITRAGHGRDENILLVTLGLSIVIENLALFAFRSD-------- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 TV + F + G +A + + +T + A R + Sbjct: 121 ---TRTVDTPYSFEIVEVLGAFLPLPKVVAFFGALVTAALLWGLMAKTDLGRAIRALAKE 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +K + +F + +G+A S F I +IV+LG Sbjct: 178 RKGAKLVGINTEHVYAMSFGLGVGCLGVAACLLLPSYYVTPQVGHGFVL--IAFTIVVLG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM S I+ V L + + + LV++ R Sbjct: 236 GMGSFVGALVGGLIIGVVEALGGLFLGESLGQIG-------------IFLIFILVLIFRP 282 Query: 337 HSLLRLR 343 LL + Sbjct: 283 TGLLGHK 289 >gi|254178218|ref|ZP_04884873.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei ATCC 10399] gi|160699257|gb|EDP89227.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei ATCC 10399] Length = 752 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|126442169|ref|YP_001058691.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 668] gi|126221662|gb|ABN85168.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 668] Length = 752 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|67642658|ref|ZP_00441411.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei GB8 horse 4] gi|254199573|ref|ZP_04905939.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei FMH] gi|254205892|ref|ZP_04912244.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei JHU] gi|147749169|gb|EDK56243.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei FMH] gi|147753335|gb|EDK60400.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei JHU] gi|238523845|gb|EEP87281.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei GB8 horse 4] Length = 749 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|124386440|ref|YP_001026440.1| putative branched-chain amino acid ABC transporter, permease/ATP binding protein [Burkholderia mallei NCTC 10229] gi|254358710|ref|ZP_04974983.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei 2002721280] gi|124294460|gb|ABN03729.1| putative branched-chain amino acid ABC transporter, permease/ATP binding protein [Burkholderia mallei NCTC 10229] gi|148027837|gb|EDK85858.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei 2002721280] Length = 749 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|319780971|ref|YP_004140447.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166859|gb|ADV10397.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 300 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 107/313 (34%), Gaps = 35/313 (11%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---------LGSRYG 89 + + IY + A G ++V G +G+++ + +GA++ +I Sbjct: 8 LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMVGAFTALIVFLALGALFYSVPVV 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L++ +++ V+ +++ + + + +A LI + L + +T G Sbjct: 68 LALLIMMIVAMLLTSLYNWTIEKVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + + + + + + +++ L A + +T++ A Sbjct: 128 KPIPPMVSQV------------YNINGISVSLKQIIIVVVTALLLALFWYLVNKTSLGRA 175 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + +A +AG F I+ F+ + Sbjct: 176 QRACEQDRKMAALLGIDVDRTISITFIMGAALAAVAGTLFLMYYGVIAF-SDGFTPGVKA 234 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + + + + F L Sbjct: 235 FTAAVLGGIGSLPGAVVGGLMIGFIESMWSAYFSIDYKDVAAFS-------------ILA 281 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 282 IVLIFLPSGILGR 294 >gi|167587946|ref|ZP_02380334.1| inner-membrane translocator [Burkholderia ubonensis Bu] Length = 325 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 132/324 (40%), Gaps = 16/324 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+Y +LL L A + Y + ++L + +FA ++++G GLLS + A Y Sbjct: 6 VLYGVLLAALLVAPFAGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATSGY 64 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 G S L + + G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 65 LTGYALQTLGFSSELGVLAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMIYFIYLQ 124 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ + R F + ++ +YYV+L + + + I+ Sbjct: 125 A--------------PFTHGEDGLQGVPRGRLFGVLDLSSDLVLYYVVLAIIVAACAFIV 170 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + I++N+ SL KL AF +S+ G+AG+ + Sbjct: 171 RIVHSPFGQVLVAIKENEARAVSLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 230 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318 ++ + +V+ + ++GGM +L A+++ + + + + + + + + S Sbjct: 231 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVSLEDRLGDIGEWLASLTGIGWFHSLGE 290 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 291 SATIVTGLIFIACVLAFRRGIVGE 314 >gi|153011053|ref|YP_001372267.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] gi|151562941|gb|ABS16438.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] Length = 328 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 58/343 (16%), Positives = 126/343 (36%), Gaps = 28/343 (8%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ + L++Y LA V ++ G + ++ +I+ + L +V Sbjct: 1 MTDMTQALSQYRHSYAGLAGVAAIIAASICGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G G+ +L + GAY I + + L+ + + G++ G L+ G Sbjct: 60 GYCGIATLGHAALFGAGAYGAGIAAAHFGITDPILMTLIGLVAGAITGLVSGAVILRAHG 119 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 + ++ + +F K T G G+ G F +Y Sbjct: 120 LAQLVLSIAVVHLFHEAANKASSWTGGSDGLSGISPDPIFGM------------FEFDLY 167 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 +Y + + +S + ++ R+ R ++++ ++ ++ A+L + +S Sbjct: 168 GHTVYVYAVFLLLVSFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQSAQLRMYVISG 227 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A G+ GA A S + D F+ + + +++LGG SL T + + +L Sbjct: 228 AVAGIGGALNAISTQVVGLDSLSFTMSAEALVMLVLGGTGSLFGGLIGTVVFMWFEDLVS 287 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 N +++ T++ + L V+L L Sbjct: 288 AANPFHW--------------LTMVGVLLIAVVLFAPRGLYGT 316 >gi|124026622|ref|YP_001015737.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus str. NATL1A] gi|123961690|gb|ABM76473.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus str. NATL1A] Length = 375 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 110/358 (30%), Gaps = 36/358 (10%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MSIFS + + + +L + + L + ++ + L + A G+ ++ Sbjct: 1 MSIFSTKKSWIQLTIWVLIIALIIAAPSLLPVFR-----LNLLGRYLSLAIVALGVDLIW 55 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGS-RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G G+LSL I +A+G Y + IP + G + K Sbjct: 56 GFTGMLSLGQGIFFALGGYCAAMFLQLNSSGQFPNGIPEFFGLYGVEKLPFFWEPFKSSI 115 Query: 120 DYLAIATLI----------------MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 L L+ + ++ +IL + + + Sbjct: 116 FTLISIWLLPAIIAGLLGYLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLK 175 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 + + F I + + ++V + L+ W+ R N IRD++ Sbjct: 176 TDVTQLFGQMVGSEIMQRWFFWVSAILVILAWFFARWIVRDRFGNILIGIRDDEARVRFT 235 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + K F+++ G++GA + +SP +I ++ V +GG +L Sbjct: 236 GYNPVIFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVVWVAVGGRGTLLG 295 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + + LV+ +L Sbjct: 296 AILGAVFINYAKSLVSE--------------ALPASWMFIQGGLFILVVTALPEGVLG 339 >gi|257092807|ref|YP_003166448.1| urea ABC transporter permease UrtB [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045331|gb|ACV34519.1| urea ABC transporter, permease protein UrtB [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 532 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 81/291 (27%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ +GAYS + S + + + + + G + Sbjct: 258 ITYGVMGVINMAHGELLMVGAYSAWAMQSVFRAYLPGALDWYLLAAIPVGFLAAALVGVL 317 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L W + + + + Sbjct: 318 MER--LIIRHLYGRPLETLLATWGISLFLMQVARTVFGAQNVEVANPAWMAGGIELLPNL 375 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + ++ L + + R + N+ + AF + Sbjct: 376 MLPWNRIIIVAFSIAVLVAMWAILNLSRLGMFVRAVTQNRPMAGCVGVPTGRIDTLAFGL 435 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ G A S+ + +V+LGG+ L+ A L + Sbjct: 436 GAGIAGLGGV--ALSQIANVGPDMGQGYIVDSFMVVVLGGVGQLAGAVWAALGLGVFTKF 493 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 G ++++ + + I R L L+ Sbjct: 494 LEGWTGAVVAK-------------IVVLVFIIIFIQKRPQGLFALKGRFVE 531 >gi|149375699|ref|ZP_01893468.1| branched-chain amino acid ABC transporter,permease protein [Marinobacter algicola DG893] gi|149360101|gb|EDM48556.1| branched-chain amino acid ABC transporter,permease protein [Marinobacter algicola DG893] Length = 399 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 89/336 (26%), Gaps = 36/336 (10%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---- 84 + + +M + L Y A GL + G G+LSL + + +G Y + Sbjct: 27 VILPLVLDPFRLNMVGKYLTYAFVAIGLVMCWGKAGILSLGQGVFFGLGGYCMAMFLKLE 86 Query: 85 --------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + S L F Sbjct: 87 ASTPEATAIQSTPGIPDFMDWNQLTELPWFWEPFHSFSFTLIAVIGVPVLLAFVIGFAMF 146 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYV 186 + + +A L L + + +Y+V Sbjct: 147 TRRVGGVYFAIITQAIAAILTILIIGQQGYTGGVNGITDLQTLKGWDIRTDEARTALYFV 206 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +GM FL + ++ + + + + K+ F +++AF G+ G Sbjct: 207 CVGMLFLCLFVARLVQNRKLGRILVAMNAQEMRVRFSGYDVAAFKIFVFCLAAAFAGIGG 266 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A F +SP +I ++ LGG S+ ++ Sbjct: 267 AMFTLIVGFMSPSFIGIVASIEMVIFCALGGRLSILGAVYGALLV--------------N 312 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + F SF M V+L + L L Sbjct: 313 AAKSGFSESFPELWPFAMGALFIGVVLAFPNGLAGL 348 >gi|167035270|ref|YP_001670501.1| inner-membrane translocator [Pseudomonas putida GB-1] gi|166861758|gb|ABZ00166.1| inner-membrane translocator [Pseudomonas putida GB-1] Length = 307 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 87/290 (30%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSLPI 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 ++ + + + + I I + + Sbjct: 71 LMTVAFVATIFVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNTVLLSQDSKDK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + F + V+ V + + L++ R+ + A R ++ Sbjct: 131 SIPNLIPGSFSFGPGGAEEVLISYMQVLVFVVTLVAMTLLTLFISRSRLGRACRACAEDI 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A + I+P+ F + + +LGG Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ +L + + ++ F + I Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|15966238|ref|NP_386591.1| high-affinity branched-chain amino acid transport permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307308589|ref|ZP_07588291.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] gi|307317367|ref|ZP_07596807.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|15075508|emb|CAC47064.1| Probable high-affinity branched-chain amino acid transport permease ABC transporter [Sinorhizobium meliloti 1021] gi|306896956|gb|EFN27702.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|306900989|gb|EFN31598.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] Length = 300 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 97/304 (31%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY M A G ++V G +G+++ + +G ++ +I+ I + V Sbjct: 8 LVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTFIAGVPVV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A++ ++ + + +A L S ++ I V Sbjct: 68 LALLIMMVVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F S + +I + + + + RT + A R ++K Sbjct: 128 KPIPPLVSSVYDLFGISVSLKQIIIVVITAILLS---VFWYIVNRTPLGRAQRATEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + + F+ + + +LGG+ Sbjct: 185 MAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTD-GFAPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L +V++ + Sbjct: 244 GSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFS-------------ILAIVLIFKPSG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|13473393|ref|NP_104960.1| permease of ABC branched chain amino acid transporter [Mesorhizobium loti MAFF303099] gi|14024142|dbj|BAB50746.1| permease of ABC branched chain amino acid transporter [Mesorhizobium loti MAFF303099] Length = 300 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 104/313 (33%), Gaps = 35/313 (11%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---------LGSRYG 89 + + IY + A G ++V G +G+++ + +GA++ +I Sbjct: 8 LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMVGAFTALIVFLILGALFYSVPVV 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 +++ +++ V+ +++ + + + +A LI + L + +T G Sbjct: 68 IALLVMMIVAMLLTSLYNWTIEKVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + + + V + +++ L + RT++ A Sbjct: 128 KPIPPMVSQV------------YNIDGVSVSLKQIIIVIVTALLLVVFWYLVNRTSLGRA 175 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + ++ +AG F ++ F + Sbjct: 176 QRACEQDRKMAALLGVDVDRTISITFIMGASLAAVAGTLFLMYYGVVAF-SDGFVPGVKA 234 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + + + + F L Sbjct: 235 FTAAVLGGIGSLPGAVLGGLLIGFIESMWSAYFSIDYKDVAAFS-------------ILA 281 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 282 IVLIFLPSGILGR 294 >gi|168335481|ref|ZP_02693567.1| inner-membrane translocator [Epulopiscium sp. 'N.t. morphotype B'] Length = 300 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 105/303 (34%), Gaps = 20/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G + L++ +GAY ++ + + ++I + + V Sbjct: 11 IINGLHVGSIYALIALGYTMVYGIVKLINFAHGDIMMVGAYVAFVMMTAFNMNIVVALIV 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + GM + + K + LI + L + G Sbjct: 71 AVIFCSLLGMTIEKVAYKPLRKAPRMWALITAIGVSFFLESAVMVLFGANPKPFPAPPSK 130 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + + M L L ++ +++ T + A R ++ Sbjct: 131 L------------ITIGNLQFSQLMLISLALSVVLMIALERFIKTTRLGKAMRASSEDAD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + ++ +AF + SA + G FA + +I + + +LGG+ Sbjct: 179 AAALMGISVNKTISTAFVIGSALAAIGGVLFAIAYPQI-KPLMGMMPGLKAFIAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + +L + L G ++ + + ++ L LV+L++ Sbjct: 238 GIIPGAMLGGFLLGLIESLTKGFLSAFWPGATLWADA-------ILFSILILVLLIKPSG 290 Query: 339 LLR 341 +L Sbjct: 291 ILG 293 >gi|159027463|emb|CAO89428.1| natC [Microcystis aeruginosa PCC 7806] Length = 371 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 116/372 (31%), Gaps = 61/372 (16%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ S+ I IY +FA GL++ G GL++ V +GAY+ V+L + I+ I Sbjct: 3 DYLVSLTIWAGIYAIFALGLNLQWGFTGLINFGHVAFATLGAYATVLLTLQGVPMIFAAI 62 Query: 97 PVS-----------------------------------------AMISGACGMIMGLPSL 115 + + G+ G+ L Sbjct: 63 VGALLGALLGLAIGFSTLRLRADYLAIVTIGVSELIRLLVLNEDWLTKGSFGLQRYPLPL 122 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + +I I W+ N + A ++ + Sbjct: 123 DINPSFPVKLLIIALFTLLAIFALWQLGRNLQRQWREAGQISGKSYQPTQKRALIFWGLL 182 Query: 176 FVIYEIFMYYVLLGMCF-----------------LSASIILWLRRTAISNAWRTIRDNQK 218 I +F+Y + L + + L R+ + IR++++ Sbjct: 183 GAIILLFLYINGVIALNDYNYKAGLMVVVLVLLALVYTGLELLLRSPWGRILKAIREDEE 242 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L + + KL + + A G+AGAF A I P F+ I+ILGG Sbjct: 243 IPRALGKNVFWYKLQSLMLGGAIAGLAGAFLAWQLTTIYPTNFEPLLTFNAWIIIILGGS 302 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S + I L + + D ++ + L ++++ R Sbjct: 303 GSNAGTLLGAVIFWAYDSLTRFILP---QLDIFNDSQLGALRIMIIGLLLMVLMIWRPQG 359 Query: 339 LLRLRTPSNFLE 350 +L + + Sbjct: 360 ILGKKEELTLGK 371 >gi|307301512|ref|ZP_07581272.1| urea ABC transporter, permease protein UrtC [Sinorhizobium meliloti BL225C] gi|306903569|gb|EFN34157.1| urea ABC transporter, permease protein UrtC [Sinorhizobium meliloti BL225C] Length = 391 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 106/351 (30%), Gaps = 35/351 (9%) Query: 13 KILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 IL LAV+ P L L Y+ S+ + L Y + A L +V G G+LSL Sbjct: 19 AILLALAVIVPALNLLTAPEHPLHVPTYLVSLFGKYLTYALLALALDLVWGFCGILSLGH 78 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +A+G Y+ + R + LP + D A L++ Sbjct: 79 AAFFALGGYAMGMYLMRQIGARGSYGNPLLPDFMVFLNWKELPWFWYGFDMFWFAALMVV 138 Query: 131 EIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFR 171 + + + + D + + Sbjct: 139 LVPGLLAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILG 198 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F ++ +S + + R+ +RD + L + K Sbjct: 199 FNIQADGTRAALFAASALALAVSLVVTSGIVRSKFGKVLVALRDAESRTRFLGYRVEHMK 258 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L AF VS+ G+AGA + I+P F + +I V+ +GG +L ++ Sbjct: 259 LFAFTVSATMAGVAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAILV 318 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G + F +F + LV L ++ Sbjct: 319 NGGKSI--------------FTAAFPEFWLFALGGLFVLVTLFLPKGVVGT 355 >gi|302871814|ref|YP_003840450.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47] gi|302574673|gb|ADL42464.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47] Length = 294 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 91/289 (31%), Gaps = 10/289 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + + G ++V G + L++ + +GAY + + L + + + Sbjct: 8 LINGITLGSIYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAFLSVAYLKLGLIPSLLI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ + K + IA LI + +L I G + Sbjct: 68 SMIFCSVLGILIEKFAYKPLRNSPRIAALITAIGVSLLLENLMQIIMGADSRVFPRLVTE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +++ + ++L ++T I A R + + Sbjct: 128 KNYHLFQGRIVINNKQIYLLIITILLMIILNFVV---------KKTKIGKAMRAVSQDMD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG + I+P M + + GG+ Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + L + L G + + F + + Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 286 >gi|149913644|ref|ZP_01902177.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter sp. AzwK-3b] gi|149812764|gb|EDM72593.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter sp. AzwK-3b] Length = 327 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 57/311 (18%), Positives = 111/311 (35%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ LL + + ++ ++ I + GL+I +G GL+SL + IG Sbjct: 10 ALLLGLLAVPLWAWVADEPFTITLATRVAILALAGVGLNIALGLGGLVSLGHAAFFGIGG 69 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ IL S L+ + ++ L ++ + + I Sbjct: 70 YAMGILASHAQSFSPLMDSPLLIEGTKSMPVIWLVAILTSALAALVIGALSLRTSGVYFI 129 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + G S+ FP + I + + L+ Sbjct: 130 MITLAFGQMFYFFAISWPAYGGEDGLSIYVRNDFPGLNTLDPIQFFGICFAALALALWFN 189 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ A R N ++ + +L+AF +S A G+AGA FA +SP Sbjct: 190 ARLARSPFGLALNAARQNPTRVETIGLSPFRLRLTAFVISGAITGLAGALFADLNRFVSP 249 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 MF + + ++ +ILGG+ L A+ I + + G++ ++ L + Sbjct: 250 TMFSWQMSGEIMVFIILGGVARLYGPVAGAALFITLEHMLGGLSEFWMIWLGLLLLLVVL 309 Query: 319 RHTTLMVIALF 329 ++ L Sbjct: 310 FARGGVIGLLA 320 >gi|160901752|ref|YP_001567333.1| inner-membrane translocator [Petrotoga mobilis SJ95] gi|160359396|gb|ABX31010.1| inner-membrane translocator [Petrotoga mobilis SJ95] Length = 304 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 19/305 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + Y + + W Sbjct: 10 LANAISLGSIYALIAIGYTMVYGILNLINFAHGDIFTFSMYFAFYAVTLFLFPWWAAFIF 69 Query: 99 SAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++ G + + + + + I+ LI + L + + G +L Sbjct: 70 AIVLTTLLGATIERVAYRPLRKANAPKISALITAIGVSFFLQNFAIVVFGGRAKSFNPQL 129 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 T V + + ++ ++ + RT A R + + Sbjct: 130 GVYPTQFA-----QVLTFGDVRIPLLTFIIIGVSILALFVLVWIVYRTKAGMAMRAVSKD 184 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 A + F + SA + G +A +I P + ++G Sbjct: 185 VTAAKLMGINTDRTISQTFMLGSALAAVGGILWAMKYPQIYPYT-GMIPGLKAFIAAVVG 243 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ IL + + F + + I L +++L++ Sbjct: 244 GIGSIPGAMLGGFILGVAEIMI-----------VAFLPALAGYRDAIAYIILIVILLVKP 292 Query: 337 HSLLR 341 + LL Sbjct: 293 NGLLG 297 >gi|121608869|ref|YP_996676.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121553509|gb|ABM57658.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 290 Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 93/307 (30%), Gaps = 26/307 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + +Y + A GL++V G L +++ + + Y+ L +G+ ++ + Sbjct: 9 PSLLNGLATGAVYALIAVGLTLVYGVLHIINFAHGASLMLALYAVYFLKECWGIDPYMAL 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ A G + + +L+ + ++ + Sbjct: 69 PIAIPGMFALGYALQRAIINRASHGKDENSLLATLGIAIVMENLALLFFQSDTRS----- 123 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + + G +S + + RT + A R + Sbjct: 124 ------IDTAYSLRTVAIGPAMIAVPKLLACAGALAVSGLLYWIMGRTDLGRAIRAVAKE 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + +F + A +G A F + ++ +IV+LG Sbjct: 178 KEGAKLMGIDVDHVYAMSFGIGLACLGAAACFLLPAYYV--NPQVGGGFVLVAFTIVVLG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM S + ++ L + + V+L+R Sbjct: 236 GMGSFAGALAGGLLVGVAESLGGLCLGESLGQIG-------------IFAIFIGVVLLRP 282 Query: 337 HSLLRLR 343 L + Sbjct: 283 QGLFGAK 289 >gi|330960031|gb|EGH60291.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 529 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ + I +I+ + Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMFQRYAPGAIEYYPLIALPVAFFVTAMIGMA 315 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 374 VLPYNRIVIIAFALFVVMLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 491 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526 >gi|94310798|ref|YP_584008.1| inner-membrane translocator [Cupriavidus metallidurans CH34] gi|93354650|gb|ABF08739.1| ABC-type transporter, permease component [Cupriavidus metallidurans CH34] Length = 437 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 117/338 (34%), Gaps = 32/338 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + +L L ++L L + S + ++ Q+ I ++FA ++++G G+LS Sbjct: 22 RPMNLLRWLIWSVTVVLMLVMPLIFSGGFAVTLLSQMGIMIIFALSYNMLLGQTGMLSFG 81 Query: 70 CVIAYAIGAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 + +GA+ +I + L + +L V + G+I G + K G A+ Sbjct: 82 HAVYSGLGAFIAVHVLNMIGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKSGTTFAM 141 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 T+ + E+ + + G+ GI + + F + +Y Sbjct: 142 ITMGIGEMVFASSLMFPDFFGGEGGIS------------TNRVVGEPFLGITYGHGRQVY 189 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++ C LS + T + +RDN + + + +S+ F G+ Sbjct: 190 YLIAAWCLLSMVAMYAWTHTPLGRIANAVRDNPERVEFIGYNTQRVRYLVLILSAFFAGI 249 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA A + + +S + + V+ +GG + + Sbjct: 250 AGALSAINFEIVSAENVSAVRSGGVLLAAFIGGAGVFFGPVIGAIVFTLFAVALSDLTKA 309 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + ++++ + L Sbjct: 310 W---------------LLYLGLFFVMMVMFVPGGIASL 332 >gi|319404275|emb|CBI77868.1| permease protein of ABC transporter [Bartonella rochalimae ATCC BAA-1498] Length = 353 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 66/339 (19%), Positives = 116/339 (34%), Gaps = 7/339 (2%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K I + + FLF Y + I I + A L++ G G+ S Sbjct: 1 MTKSLNIFLSFVSIIIFISFLFYADNYFNDYTLRIINLIAINAILAISLNLTYGFTGMFS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L AIGAY I ++ + I+ + + L+ A + Sbjct: 61 LGHAGFMAIGAYVCAIFLLSPEQK--EMMWILEPIAEPLKNLQLSFFVSVIISGLSAAII 118 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + F + + + G R+ + T + I + + Sbjct: 119 GLLIAFPILRLGGDYLGIATLGFAEIIRVVIINATPLTN----GSLGIKGIPQYATLWWN 174 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G + I L ++ N R IRD++ A + F + +F V + F G+ GA Sbjct: 175 FGWLAFTIIFITLLLQSNTGNVLRAIRDDEIAAKIMGVNTFFYRCFSFTVGAFFAGIGGA 234 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 AA I P MF F ++ IV+ GG+ S++ ++ I+ ++E + Sbjct: 235 LTAALISTIDPKMFNFILTFNILMIVVAGGLGSITGSVISSIIITIMLEWLRIVENPLNL 294 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 + + I L +IL LL R S Sbjct: 295 GFINIP-GLPGLRMVIFSIILLAIILYWQKGLLGQRELS 332 >gi|254699296|ref|ZP_05161124.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella suis bv. 5 str. 513] gi|261749739|ref|ZP_05993448.1| predicted protein [Brucella suis bv. 5 str. 513] gi|261739492|gb|EEY27418.1| predicted protein [Brucella suis bv. 5 str. 513] Length = 570 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 105/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + + +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVSIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|332298884|ref|YP_004440806.1| ABC-type transporter, integral membrane subunit [Treponema brennaborense DSM 12168] gi|332181987|gb|AEE17675.1| ABC-type transporter, integral membrane subunit [Treponema brennaborense DSM 12168] Length = 299 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 92/289 (31%), Gaps = 8/289 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ +GAY+ + +G + + + Sbjct: 11 LINGLSLGSIYALIALGYTMVYGIVKLINFAHGDVLMLGAYAGYFVLRHFGTNP-ASMAL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ ++ + +F L A + N LI I+ Sbjct: 70 AFLVAMVLCAVIAILIERFAYRPLRSAPRL------NSLITAIAISLILQNGVRVLPFIG 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V V++ L + + T A R + + + Sbjct: 124 PNPRQFPTMATVNISLGVVSISNIQLIVIVLSAVLMLILNYIINYTKTGKAMRAVSYDLQ 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + ++ FA+ + G +A++ +I P M + +LGG+ Sbjct: 184 AASLMGISVNRTIAFTFALGAVLAAAGGVLYASAYPQIDPTM-GTMPGLKAFVAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ IL + G F+ + F + I Sbjct: 243 GSVPGAMLGGYILGIAETMTKGFLSSQFSDAISFSILIIILLVKPTGIL 291 >gi|209885977|ref|YP_002289834.1| inner-membrane translocator [Oligotropha carboxidovorans OM5] gi|209874173|gb|ACI93969.1| inner-membrane translocator [Oligotropha carboxidovorans OM5] Length = 320 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 129/325 (39%), Gaps = 25/325 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L V+ L+ + + + Y+ M + Y + G +++ G+ GLLS + +G Sbjct: 7 LWVLAALIAVMAVMPFFASSYMLLMLLPFFGYAIALLGFNLLFGTTGLLSFGHALFLGVG 66 Query: 78 AYSYVILGSRYGLSIWLLIP-VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY+ L S++G+ + I VS ++S +I+G +++ + + TL +F + Sbjct: 67 AYTASTLTSKFGVLSYEAILLVSMLVSALVAVIVGALCVRYTKIFFGMLTLAFGMLFHSF 126 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L K+ +T G G+ V L F YY +L + + + Sbjct: 127 LFKFYSVTGGDQGMRVLRPLLLGIDFGGGKTSF---------LIGPFYYYVLALFAVLGA 177 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ + + + IR+N + I +L+AF +S+ + G+ G A + Sbjct: 178 VMWRITESPFGLHLKAIRENANKAAYVGVQIFRMRLAAFVISAVYGGVGGTILAITTGLA 237 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P++ ++ + ++ + +LGG + + + ++ + Y+ Sbjct: 238 DPELAYWTHSGNLVFMAVLGGSGTFVGPVIGALAFVTLQDIVMTVTQYW----------- 286 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 +M L L+++ + Sbjct: 287 ----RFVMGAVLVLLVIFLPQGISG 307 >gi|254438896|ref|ZP_05052390.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] gi|198254342|gb|EDY78656.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] Length = 315 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 96/322 (29%), Gaps = 15/322 (4%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 G Y+ + IY + A G+++ L + GAY + + Sbjct: 4 AFGFDFVNFYLIPGLVLGCIYALGAIGITLTFSILRFANFAHGEIMMSGAYLTWTVMAIA 63 Query: 89 GL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 G + + +A++ + K + I ++ S I+ + Sbjct: 64 GYAGLTLHPLVAMVPAALLVILLFLGTDKLFYKPFRNADTIKVVMASFGMMLIIRSAVQV 123 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 G + + +R + +I ++ G + ++ L R Sbjct: 124 IWGPNQLTFVRGIAKPNPVLRDMSSDIGMM---LIIPNKHLFIFAGTVIIVFALSYLLNR 180 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 T I A R + D+ + + + V AG F + M F Sbjct: 181 TRIGKAMRAVSDSPDLAHVTGIDVDKVIRATWIVGGICATAAGVFLVMDVQMLETTM-GF 239 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + + + ILGG+ ++ EL + + T + Sbjct: 240 RMLLPMFAAAILGGIGKPYGAVFGGLVIGLAEEL------SAYPWIGDAPLLSPGYKTGV 293 Query: 324 MVIALFLVILMRSHSLLRLRTP 345 + +++++R L + R+ Sbjct: 294 AFAIMVVMLIVRPQGLFKGRSF 315 >gi|121604522|ref|YP_981851.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120593491|gb|ABM36930.1| amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 622 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 114/300 (38%), Gaps = 19/300 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ + L A Y ++ LI ++F L ++ GL+S +A+GAY Sbjct: 318 VIALAFVLLAGLAWSGGAYWQTLAADALILMIFGISLQSMMALGGLVSFGHAAFFALGAY 377 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + S +G ++ + + + A + G ++ G YLA+ +L ++++ + Sbjct: 378 GAALSHSLWGATLPVALATGCGAALAVAGVFGAAVVRSSGVYLAMLSLALAQVVWAGAAQ 437 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 W +T G G Y +L+ + ++ + Sbjct: 438 WVSLTGGDNG-------------------LIGLALVTDDGRPVFYALLVALALIAVFALR 478 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 +L R+ + A + +RD + ++ + K F S+ G+AG FAA + + P Sbjct: 479 FLSRSVMGAALQAVRDAPLRAAASGLSVGWLKYRVFVESAVLAGLAGGLFAAHKGAVFPS 538 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + S ++ + +V+LGG+ L + +L Y+ L F + Sbjct: 539 LAAVSTSVDALLVVLLGGVHQLWGAVVGSLVLTYASAELGREVTYWRGLLGVFIMLIMVA 598 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 29/301 (9%), Positives = 82/301 (27%), Gaps = 19/301 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + A GL+++ G +++ + +GA + Sbjct: 8 LLGGLSYATTLFLMAAGLTLIFGVTRIVNFAHGSFFMLGALFTAHWVTN--WFPAWGESG 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +YL + + + ++ + + Sbjct: 66 LLYLIAIFLGAACAGLAGAIAEYLLLRRMSDAPELYQLVATFGLTLAMHDAMQWGFGPDE 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + ++ + ++ ++ + + + LRR+ R ++ Sbjct: 126 VFAPRFPGLKG-SVQIGDEFFPVYQLAMIALGPLVWLGLHVLLRRSLFGQRLRAATQDRS 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L L A + A G+ GA + + +V+ GG+ Sbjct: 185 MLAALGVNPRPLMLGAVVLGCALAGLGGALQLPREPA--HLQMDMNVIVETFVVVVTGGL 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A ++ V +F ++ + + +V++ R Sbjct: 243 GSIGGAFVAALLIGLVHAFGTA--------------AFPQATLVVVFLTMAVVLVFRPQG 288 Query: 339 L 339 L Sbjct: 289 L 289 >gi|260166830|ref|ZP_05753641.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella sp. F5/99] gi|261756208|ref|ZP_05999917.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99] gi|261736192|gb|EEY24188.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99] Length = 570 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRSYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|241763310|ref|ZP_04761367.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241367585|gb|EER61872.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 331 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 124/302 (41%), Gaps = 15/302 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++++ + +FA ++++G G+LS AY +GL+ + + + Sbjct: 30 FVMKLMCFALFASAFNLLLGYTGMLSFGHAAFLGGAAYVTGHTLKVWGLTPEIGLLLGTA 89 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 G G+I+G +++ G Y + TL ++++ ++ T G+ G+ R Sbjct: 90 AGGLLGLIVGFFAIRRTGIYSTMITLALAQMLFFACLQAP-FTGGEDGLQAVPR------ 142 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + ++ MYYV+L + + +I+ + + I++N+ Sbjct: 143 -------GKLFGVVDLASDLTMYYVVLVIVVAAFLLIVRTIHSPFGQVLKAIKENEPRAT 195 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+A G+AGA + ++ + V+ + ++GG+ +L Sbjct: 196 SLGYDTNRFKLLAFVLSAALAGLAGALKTLVLGFATLSDVHWTASGHVVLMTLVGGLGTL 255 Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 S +A+++ + + + + + + + T + + + +L ++ Sbjct: 256 SGPLVGSAVVVLLENKLGEIGHFLATLTSVDWFNTLGESVTMVTGLIFVICVLAFRRGVM 315 Query: 341 RL 342 Sbjct: 316 GE 317 >gi|153008729|ref|YP_001369944.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] gi|151560617|gb|ABS14115.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] Length = 329 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 133/337 (39%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L ++ + L+ L + +++L + +FA ++++G G+LS + Sbjct: 23 LSIIVLGIALVGLLAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 78 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G++ L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 79 GGAAYITAHTVKIWGVTPELGLVLGVLAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 138 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R + F + + MYY +L + L Sbjct: 139 FFCLQATFTHG--------------EDGLQGVPRGYLFGIIDLNQPMNMYYFVLAVFVLG 184 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +I + + +++R+N+ SL ++ KL+AF +S+A G+AG A Sbjct: 185 VFVIWRIINSPFGMILKSVRENENRAVSLGYSVNRYKLAAFVMSAALAGLAGGLKALVFQ 244 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 245 FATLTDVGWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNYLATSDFPV--------- 295 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 296 ------TIVTGVIFMACVLLFRKGIVGEFYASRIGKK 326 >gi|300813936|ref|ZP_07094240.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511999|gb|EFK39195.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 295 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 104/307 (33%), Gaps = 29/307 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----GLSIWL 94 I + IY + A G ++V G L++ IGAY+ V + G +WL Sbjct: 7 IINGLSLGSIYALVALGYTMVYGIALLINFAHGEIIMIGAYTVVFSTTLCLAKIGAPLWL 66 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 I + ++ G+ + + + + I+ LI + L + G + Sbjct: 67 SIIPAVILCTILGLFIERVAYRPLRNSPRISNLITAIGVSLFLQNIVMLFFGAGAMST-- 124 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 +SL + + ++ L+ ++ ++ RT + A Sbjct: 125 ---------QSLFKTQIVKLGSLEIPFISLITIVITAILTVALQYFMTRTKMGKALIATS 175 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++ KA + + A + F + SA G+A + + + P M I + + Sbjct: 176 EDSKAAQLVGINVDNAMVLTFGIGSALAGVAAVLYMGTYAQAQPLM-GSMLGIKAFTAAV 234 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG+ + +L V L + F L +V+L+ Sbjct: 235 IGGIGLVPGAVIGGLLLGIVEALTRAYLSSKLADAIVFS-------------ILIIVLLI 281 Query: 335 RSHSLLR 341 + LL Sbjct: 282 KPTGLLG 288 >gi|254711252|ref|ZP_05173063.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella pinnipedialis B2/94] gi|256030119|ref|ZP_05443733.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella pinnipedialis M292/94/1] gi|261318846|ref|ZP_05958043.1| predicted protein [Brucella pinnipedialis B2/94] gi|265987148|ref|ZP_06099705.1| predicted protein [Brucella pinnipedialis M292/94/1] gi|261298069|gb|EEY01566.1| predicted protein [Brucella pinnipedialis B2/94] gi|264659345|gb|EEZ29606.1| predicted protein [Brucella pinnipedialis M292/94/1] Length = 570 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDMVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|126731076|ref|ZP_01746884.1| ABC transporter ATP-binding protein [Sagittula stellata E-37] gi|126708378|gb|EBA07436.1| ABC transporter ATP-binding protein [Sagittula stellata E-37] Length = 349 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 60/331 (18%), Positives = 121/331 (36%), Gaps = 27/331 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A ++ L + A + ++ + I + A L + G G++SL + A G Sbjct: 23 AWWVLGVILLTMPAWANDFFLFQVMGWTFILGIIALSLMFLAGYGGMVSLIQMSVAATGG 82 Query: 79 YSYVILGSRYGL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 Y I G+ S WL +P++ +I+ G I+G +++ G Y + TL ++ F Sbjct: 83 YMVAIFGTSGAELSMGLSWWLYLPLAILIAAIFGTIVGALAVRTEGIYTIMITLAIAAAF 142 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + I NG +G + G R YY+ LG Sbjct: 143 FYFTRQNYTIFNGYSGFNLVVPPDLFGIDWRQ--------------PAPFYYLTLGCALA 188 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + ++ R A + +RDN + +L + +++A+ +S + G Sbjct: 189 CYAAVSYVSRAPFGLALQGVRDNPRRMAALGFNVTAHRVAAYTFASVIAAIGGILLVWQN 248 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +I+P I ++ I ++GG++ I + + + + S +F Sbjct: 249 AQIAPGTAGIPAVIDILVIAVVGGISRPIGAFIGALIYVLLRTFSPDVLLAFGMSGERFK 308 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 L+ + V+ +L L Sbjct: 309 --------LLIGLGFLAVVFFSPDGVLGLWE 331 >gi|15807115|ref|NP_295844.1| branched-chain amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6459919|gb|AAF11671.1|AE002047_4 branched-chain amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 348 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 107/338 (31%), Gaps = 39/338 (11%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L + + ++ + + + +Y +FA G +++ LG+++ + +GAY L Sbjct: 21 LGVAMEPSQLIQNLVNGLAIGSVYAIFALGYTLIFSILGIINFAQGAVFTLGAYLTYTLV 80 Query: 86 SRYG----------------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 S + L + + ++G +++ + + A Sbjct: 81 SGQFENNGLLKGINLFPDGSPLAGNPWAFGLATLLGSALAGLIAVVIERLAFRPMRARGA 140 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 L + L+ I + G +L V Sbjct: 141 EPLLALVSSLGVALVIVNLIQLLVGAESYSFPANAYGEFPPALTFHVGDKV--VAVRTVQ 198 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 + + + + RT I A R + +N L ++ L F +S G Sbjct: 199 LVIFAVSMVMLGILGYVIGRTKIGKALRAVAENPGTASLLGISVDRYVLITFFLSGFLGG 258 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 +AG + + I F + + +++++LGG+ S+ ++ Sbjct: 259 LAGTLVSLAFG-IGGPYFGQAFGLKGLAVIVLGGLGSIPGAVLGGLVIGLAEAFV----- 312 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + LF+V+L+R LL Sbjct: 313 ---------PADYSAYKDAVAFALLFIVLLLRPQGLLG 341 >gi|299066768|emb|CBJ37962.1| putative ABC-type branched-chain amino acid transporter, membrane component [Ralstonia solanacearum CMR15] Length = 440 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 104/310 (33%), Gaps = 2/310 (0%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + L L+ L L Q + ++ Q+ I ++FA ++++G G+LS Sbjct: 23 KPLNLARWLIWGTTALVMLVLPLIWPQGFAITLLSQMGIMIIFALSYNMLLGQAGMLSFG 82 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + +GA+ V L +R G + L I ++ +L Sbjct: 83 HAVYAGLGAFVAVHLLNRIGAAPALGIGGPLAVALLPVAGGLGGALFGVLFGYVTTRRAG 142 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + L + + + + + D G + +YY++ Sbjct: 143 TTFAMITLGIGEMVF--ASALMLPDFFGGEGGVSTNRSIGEPLLGISFGPARQVYYLIAV 200 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 C +S +++ +T + +RDN + + + +S+ F G+AGA Sbjct: 201 WCLISMALMYAWTQTPLGRLANAVRDNPERVAFVGYDTQRVRYLVVILSAFFAGIAGALS 260 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + + ++ + + V+ +GGM + + + G+ + L Sbjct: 261 CINFEIVTAENVSAVRSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSGLTKAWLLYL 320 Query: 310 LKFDCSFNMR 319 M Sbjct: 321 GLLFVLMVMY 330 >gi|332085349|gb|EGI90521.1| high-affinity branched-chain amino acid transport system permeaseprotein livM domain protein [Shigella boydii 5216-82] Length = 159 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 15/153 (9%) Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 I L R + AW +R+++ A SL + KL+AF +S+AF G AG FAA + +S Sbjct: 13 INRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVS 72 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F F+E V++IV+LGGM S + A +L+ EL N Y Sbjct: 73 PESFTFAEPAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY------------- 119 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L+++ R LL + P L+ Sbjct: 120 --SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 150 >gi|291539475|emb|CBL12586.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Roseburia intestinalis XB6B4] Length = 293 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 101/305 (33%), Gaps = 23/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IG Y + + G + + Sbjct: 5 SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGCYVVFLAMNGQGWPPLVAV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +S ++ G+++ + K +A LI + L + G + + Sbjct: 65 VLSVIVCTVLGIVIEKIAYKPLRRATPLAVLITAIGVSYFLQNAALLLFGADTKSFTNVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +L + A +++++++T A + ++ Sbjct: 125 TLPSLKLAG---------GSLTISGTTIVTVLACVVIMAGLMIFIKKTKAGQAMLAVSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ S +AG F ++ ++P I + + G Sbjct: 176 KDAAQLMGVNVNATISLTFAIGSGLAAIAGVLFCSAYPTLTPYT-GSMPGIKAFTAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ G +L + ++ L +V+L++ Sbjct: 235 GIGSI-------------PGALIGGILLGIIEILGRAYISSQLSDAIVFAVLIIVLLVKP 281 Query: 337 HSLLR 341 +L Sbjct: 282 TGILG 286 >gi|46202077|ref|ZP_00208372.1| COG0559: Branched-chain amino acid ABC-type transport system, permease components [Magnetospirillum magnetotacticum MS-1] Length = 304 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 95/312 (30%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90 + + IY + A G ++V G LG+++ Y +GA+ +I + L Sbjct: 8 LINGLTLGAIYGLVALGYTMVYGVLGMINFAHGTIYMVGAFISLITFLAATTLLGTSVPL 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 ++ L + + ++ G + + +A LI + +L + G Sbjct: 68 ALVLTLFAAMGLTALWGWTAERVAYRPLRSAPRLAPLISAIGVSIMLQNFVAQAQGARAK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + I V ++ L A + RTA+ A Sbjct: 128 PLPP-------VFKGGITLMDGGGFVVSLSWMQMVIMALTLALMAVFTWIITRTALGRAQ 180 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + K L + + F + + G+AG I F I Sbjct: 181 RACEQDMKMASLLGIDVDRVISTTFVIGAGLAGVAGMMVTLYYGVIDFY-IGFLAGIKAF 239 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL ++ + + + F L Sbjct: 240 TAAVLGGIGSLPGAMLGGLLIGLIEAFWSAYFSIEYKDVATFS-------------ILVA 286 Query: 331 VILMRSHSLLRL 342 V++ R LL Sbjct: 287 VLVFRPTGLLGR 298 >gi|229102570|ref|ZP_04233274.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock3-28] gi|228680797|gb|EEL34970.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus Rock3-28] Length = 298 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 125/313 (39%), Gaps = 31/313 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98 M QI I+ +FA I++G G++S + + IGAY +L R + ++ I Sbjct: 1 MFTQIFIFAIFAMSFDILLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFFIGIIA 60 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++S I+GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 YYV ++ +++I + I N++ Sbjct: 121 RDRF-------------------TFYYVTFICLINIFILLRLFTKSSIGKVLKAISQNEQ 161 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L ++ K+ A V+ ++G F + ++ +F + + + ++GG+ Sbjct: 162 RVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L + + Y+ S L + R T ++ + +V+L+ Sbjct: 222 GTLI---------GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKG 272 Query: 339 LLRLRTPSNFLER 351 L+ ++R Sbjct: 273 LVGTVKQLKSVKR 285 >gi|253584207|ref|ZP_04861405.1| branched-chain amino acid transport system permease livH [Fusobacterium varium ATCC 27725] gi|251834779|gb|EES63342.1| branched-chain amino acid transport system permease livH [Fusobacterium varium ATCC 27725] Length = 294 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 91/306 (29%), Gaps = 28/306 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLL 95 I + IY + + G ++V G L++ +GAY + + +WL Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYVSLFSIPIFTRIGLPVWLT 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + +I G + + + + I+ LI + +L Sbjct: 67 VFPAIIICVILGTLTERIAYRPLRNSPRISNLITAIGVSLLLENTFMKLFTPN------- 119 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + ++ LS + ++++T A + Sbjct: 120 ----TRAFPKVFTNAPIIIGRMHLNFGTVVTIVLTIALSVGLQYFMKKTKYGKAMMATSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ S +A + ++ ++ P M I +L Sbjct: 176 DYGAAKLVGINVDNTIQLTFAIGSGLAAVASVLYVSAYPQVQPLM-GSMLGIKAFIAAVL 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL V L + L +V+L++ Sbjct: 235 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADA-------------FVFAILIVVLLVK 281 Query: 336 SHSLLR 341 +L Sbjct: 282 PTGILG 287 >gi|282882304|ref|ZP_06290935.1| high-affinity branched-chain amino acid transport system permease protein LivH [Peptoniphilus lacrimalis 315-B] gi|281297854|gb|EFA90319.1| high-affinity branched-chain amino acid transport system permease protein LivH [Peptoniphilus lacrimalis 315-B] Length = 295 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 104/307 (33%), Gaps = 29/307 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----GLSIWL 94 I + IY + A G ++V G L++ IGAY+ V + G +WL Sbjct: 7 IINGLSLGSIYALVALGYTMVYGIALLINFAHGEIIMIGAYTVVFSTTLCLAKIGAPLWL 66 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 I + ++ G+ + + + + I+ LI + L + G + Sbjct: 67 SIIPAVILCTILGLFIERVAYRPLRNSPRISNLITAIGVSLFLQNIVMLFFGAGAMST-- 124 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 +SL + + ++ L+ ++ ++ +T + A Sbjct: 125 ---------QSLFKTQIVKLGSLEIPFISLITIVITAILTVALQYFMTKTKMGKALIATS 175 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++ KA + + A + F + SA G+A + + + P M I + + Sbjct: 176 EDSKAAELVGINVDNAMVLTFGIGSALAGVAAVLYMGTYAQAQPLM-GSMLGIKAFTAAV 234 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG+ + +L V L + F L +V+L+ Sbjct: 235 IGGIGLVPGAVIGGLLLGIVEALTRAYLSSKLADAIVFS-------------ILIIVLLI 281 Query: 335 RSHSLLR 341 + LL Sbjct: 282 KPTGLLG 288 >gi|158317314|ref|YP_001509822.1| ABC transporter related [Frankia sp. EAN1pec] gi|158112719|gb|ABW14916.1| ABC transporter related [Frankia sp. EAN1pec] Length = 891 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 129/327 (39%), Gaps = 20/327 (6%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + +++ + L +++G +SL + +GAY+ Sbjct: 314 VGVALVGIIVVLLVGDARWRDAATLSIVFGILVLSLVVLIGYANQISLAQMTVAGLGAYA 373 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 V L + L L A + G+++GLP+L+ RG L I T+ M+ +L + Sbjct: 374 AVRLDIDHSLPFVLAPVAGAAVGAIAGLLVGLPALRVRGINLGILTMGMAVAVSGVLFES 433 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 T G +G F + +V L ++ +++ Sbjct: 434 THYTGGISGSQPHLP------------TVFGLDVDAARHPDRYGFVALFWLVVAGAVVAV 481 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +RR+ + +R N++A S+ ++ AKLSAF +SS+ G AG ++ Sbjct: 482 VRRSRLGRRLLVVRTNERAAASVGVSVARAKLSAFVISSSLAGAAGVLLGFRSSSVTFTQ 541 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F E+I ++S+ ++ G+TS++ + G + + + Sbjct: 542 FSFMESINLVSLAVIAGVTSITGGLLGGVMAFGGLVYLLISRLHIG--------FVTDNY 593 Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSN 347 T+ AL + +L+ + + R N Sbjct: 594 ATIFGAALVVTVLVHENGVAWHRRFQN 620 Score = 44.1 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 31/291 (10%), Positives = 79/291 (27%), Gaps = 13/291 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ +Y + A G+ + ++ GA + L G++ L Sbjct: 8 QFALLGLGVGGVYAVSAVGIVAIHRGSRTINFAHGGIALWGALVFYWLRDDQGMAAGLAA 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + + A G + L ++ ++ ++ + LI G A Sbjct: 68 VLTLLSAAAFGAAVYLLVIRIIRHRTQLSRMVATLGILGTLIGLAHSVFGSAQRV----- 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + ++ W + R + ++ Sbjct: 123 ------PDTSFPSSGVDVFGQTIPSERIIIFALAVVVVLALSAWSAWARLPLMTRAMAEH 176 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A +L + +A+ S +G A + M + ++ LG Sbjct: 177 ESAAQALGASPHLLGSLNWALGSVLAAASGILVAPIVGQFDTAMMTVMAFALAAAL--LG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S L + + + S + + +M I Sbjct: 235 RFDSYLLALAGGIALGVGESVVTHLVAEHVPSRFQLGWPQTVPFVAVMAIL 285 >gi|26987876|ref|NP_743301.1| inner-membrane translocator [Pseudomonas putida KT2440] gi|148546417|ref|YP_001266519.1| inner-membrane translocator [Pseudomonas putida F1] gi|170720343|ref|YP_001748031.1| inner-membrane translocator [Pseudomonas putida W619] gi|325275263|ref|ZP_08141220.1| inner-membrane translocator [Pseudomonas sp. TJI-51] gi|24982580|gb|AAN66765.1|AE016304_10 branched-chain amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|148510475|gb|ABQ77335.1| inner-membrane translocator [Pseudomonas putida F1] gi|169758346|gb|ACA71662.1| inner-membrane translocator [Pseudomonas putida W619] gi|313497500|gb|ADR58866.1| Inner-membrane translocator [Pseudomonas putida BIRD-1] gi|324099604|gb|EGB97493.1| inner-membrane translocator [Pseudomonas sp. TJI-51] Length = 307 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 87/290 (30%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSLPI 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 ++ + + + + I I + + Sbjct: 71 LMTVAFVATIFVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNTVLLSQDSKDK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + F + V+ V + + L++ R+ + A R ++ Sbjct: 131 SIPNLIPGSFSFGPGGAEEVLISYMQILVFVVTLVAMTLLTLFISRSRLGRACRACAEDI 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A + I+P+ F + + +LGG Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ +L + + ++ F + I Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|93005821|ref|YP_580258.1| inner-membrane translocator [Psychrobacter cryohalolentis K5] gi|92393499|gb|ABE74774.1| inner-membrane translocator [Psychrobacter cryohalolentis K5] Length = 592 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 32/288 (11%), Positives = 88/288 (30%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ IGAY+ ++ + + + + + ++ Sbjct: 319 ITFGLLGVINMAHGELIMIGAYATYMVQNLFQAYFPSMTGWYLVAAIPVAFLVSAIIGMV 378 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L + + + + + + SS + Sbjct: 379 IER--IIIRPLYGRELETLLATFGVSLILMQLVRMIFGAQNVEVSNVDWLSGAYQVSSIL 436 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + ++ L +T R + N++ ++ + + AF + Sbjct: 437 VLPFNRIAIIGFTIIILMLLVYLLNKTRFGLFVRAVTQNRQMARAVGISSARIDMLAFGL 496 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A + + + ++ +V + + Sbjct: 497 GSGLAGLAGCALAQVGNVGPDLGQTYIIDAFLVVVV--------------GGVGQVWGAV 542 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + ++L+ M L+ + + L I R L L+ Sbjct: 543 LASLGLGVSGTVLEIGIGAVMAKIVLL-VLVILFIQKRPQGLFALKGR 589 >gi|163735969|ref|ZP_02143396.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] gi|161390786|gb|EDQ15128.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] Length = 326 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 117/326 (35%), Gaps = 9/326 (2%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L++ L + KY + + ++ GL + +G+ L +L+ IGA Sbjct: 1 MLAAILIVIGVLATFFASKYQLRLIYSAYVNLIVVLGLQVFMGNSRLTNLSHSAFMGIGA 60 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ I + + + + + +L + + + F + Sbjct: 61 YAAAICVTP--------VAMKQISLPDAPWGLNTFALDPVTSAIVALLITGAIAFLVGIF 112 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + G +A + + F + F I ++F ++ + + I+ Sbjct: 113 IVRMTGTGATIATLAVLVIVHSIFLYRTDIFKGNQAFFGIPQVFSLTSIVVLAVVVVFIV 172 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 R + R D++ ++ ++ +L A+ +S + AG +A IS Sbjct: 173 RGFRESPWGVMLRASADDETGSAAMGVNVVRLRLIAWVLSGLILAGAGIAYAYFLGTISA 232 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F F+ + ++++I GGM +++ T + +E+ + + F + Sbjct: 233 RPFYFNHVFLTLAMLIFGGMRTVTGAVLGTFAISFGLEVVRWLETGPVIVGIDFPEVLGL 292 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRT 344 ++ + + L + +R ++ R Sbjct: 293 SG-VMLGLVIVLTMALRPVGVMGDRE 317 >gi|86750791|ref|YP_487287.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86573819|gb|ABD08376.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 305 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 104/312 (33%), Gaps = 28/312 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90 + + + IY + A G ++V G +G+++ + IG + +I + L Sbjct: 8 LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSFGLTFVPL 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ VS I+ G + + + + +A ++ + +L+ + + G Sbjct: 68 ILLVVLLVSMAITALYGWTVERIAYRPLRNSFRLAPMLSAIGMSFVLMNFAQVAQGARVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V + T S F S+ I + VLL A + +T + Sbjct: 128 PVPPIITGGYTLHESADGFNVQLSNVQIVVVITTIVLL------AIFTWLVAKTRLGRDM 181 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ L + F + +A +AG + + M F I Sbjct: 182 RACEQDRTMASLLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFM-GFVAGIKAF 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL ++ + + + F L + Sbjct: 241 TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFSVEYKDVAAFS-------------ILIV 287 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 288 VLIFMPTGLLGR 299 >gi|161621218|ref|YP_001595104.1| inner-membrane translocator:ABC transporter [Brucella canis ATCC 23365] gi|254702418|ref|ZP_05164246.1| inner-membrane translocator:ABC transporter [Brucella suis bv. 3 str. 686] gi|260568679|ref|ZP_05839148.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261752981|ref|ZP_05996690.1| predicted protein [Brucella suis bv. 3 str. 686] gi|161338029|gb|ABX64333.1| inner-membrane translocator:ABC transporter [Brucella canis ATCC 23365] gi|260155344|gb|EEW90425.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261742734|gb|EEY30660.1| predicted protein [Brucella suis bv. 3 str. 686] Length = 570 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 105/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I KLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRVKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|170736643|ref|YP_001777903.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|169818831|gb|ACA93413.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 291 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 98/303 (32%), Gaps = 27/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I ++ + + + A GL+IV G + +++L +GAY+ + S G + + Sbjct: 4 ILNILSYVSVLTLVALGLAIVFGLMDIVNLAHAEWVTMGAYTLAVAQSVGGQHAFWAALL 63 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A I GA + + TL+ + I+ K + G + V Sbjct: 64 AAPIVGAGLGWCLERFVIRLLYTRPLDTLLATYAVSLIVQKAIELVFGTQPMLVYAPFN- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 Y + +V+ ++A + RT R + + Sbjct: 123 -----------ATVEVPGGSYPAYRMFVIGVALAVTAGCWVLFTRTRFGTKLRAVIQHPA 171 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ AF +A +AG A S S +++LGG+ Sbjct: 172 MAEAVGINTRRLNRVAFCGGAALASLAGVLVAPMVSVESH--LGVSYLAKAFFVIVLGGI 229 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S++ +A + + L S +++I ++I R Sbjct: 230 GSVAGSILGSAFVGTIETLLSYRVDPSLASA-------------IVLIVSIVLIRFRPQG 276 Query: 339 LLR 341 LL Sbjct: 277 LLP 279 >gi|56696708|ref|YP_167069.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56678445|gb|AAV95111.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 298 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 95/302 (31%), Gaps = 21/302 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + Y + A GL+IV +GL++ A+G Y+ V + + + ++I + Sbjct: 9 MNALSFGAEYALLALGLAIVFSIMGLVNFAHGEIIAVGGYTMVAMAALALSNPLIVIGAA 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + + A M++ + + L+ + +L + Sbjct: 69 VLAAVAGSMLLERVAFRPVRYADPTTGLLTAFGVSIVLQNLFLLLVSP----------RP 118 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + L + +++L+LRRT + A R + + Sbjct: 119 IAVTSLYFLDWPVDLGAIRVSSLQLFEALTTAVVIVALMLFLRRTVLGLAMRAASLDFEM 178 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 AFA+S G+A F A R + P F + ++GG Sbjct: 179 VRLSGIRANRVFAMAFAISGLLAGIACVFIMARRGSVDPH-LGFDPVLKAFVACVVGGFG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 SL +L V M + + + +V++ R + Sbjct: 238 SLPGAVLGGFLLGAVEVAMLVMLPQSLGGMTD----------AFVFGIIAMVLIWRPDGI 287 Query: 340 LR 341 L Sbjct: 288 LS 289 >gi|23500888|ref|NP_700328.1| branched chain amino acid ABC transporter ATP-binding/permease [Brucella suis 1330] gi|256015934|ref|YP_003105943.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella microti CCM 4915] gi|256059769|ref|ZP_05449964.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella neotomae 5K33] gi|256158290|ref|ZP_05456199.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella ceti M490/95/1] gi|256252769|ref|ZP_05458305.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella ceti B1/94] gi|261219848|ref|ZP_05934129.1| predicted protein [Brucella ceti B1/94] gi|261323749|ref|ZP_05962946.1| predicted protein [Brucella neotomae 5K33] gi|265996810|ref|ZP_06109367.1| predicted protein [Brucella ceti M490/95/1] gi|23464557|gb|AAN34333.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella suis 1330] gi|255998594|gb|ACU50281.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella microti CCM 4915] gi|260918432|gb|EEX85085.1| predicted protein [Brucella ceti B1/94] gi|261299729|gb|EEY03226.1| predicted protein [Brucella neotomae 5K33] gi|262551107|gb|EEZ07268.1| predicted protein [Brucella ceti M490/95/1] Length = 570 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|89093321|ref|ZP_01166270.1| high-affinity branched-chain amino acid transport system permease protein [Oceanospirillum sp. MED92] gi|89082300|gb|EAR61523.1| high-affinity branched-chain amino acid transport system permease protein [Oceanospirillum sp. MED92] Length = 308 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 95/304 (31%), Gaps = 15/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + +P+ Sbjct: 12 LINGLTIGSTYALIAIGYTMVYGIIGMINFAHGEIYMIGSYVTFIVIAGLLGMGLVSLPI 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 +I +I+ + + I I G+ R Sbjct: 72 VLLIVLIVAVIVSSTYGWTVERVAYRPLRGSNRLIPLISAIGMSIFLQNYVGLSQGYRDA 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L V F V + + ++ L++ R+ + A R ++ Sbjct: 132 ALPPQVVGGWTFGDPAVFEVTISYMQSIIWIATLLTMTALTLFISRSRMGRACRACSEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 L F V +A +AG + I+P + F + + +LGG Sbjct: 192 GMTNLLGIDTNKIIALTFIVGAALAAVAGILLSLYYGVINPFV-GFIAGLKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL + + ++ F L L++L R Sbjct: 251 IGSIPGAMLGGLILGVTEAMTAAFFPAEYKDVVSFG-------------LLVLILLFRPS 297 Query: 338 SLLR 341 LL Sbjct: 298 GLLG 301 >gi|283850318|ref|ZP_06367607.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] gi|283574344|gb|EFC22315.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] Length = 294 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 106/304 (34%), Gaps = 21/304 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + LIY + A G ++V G + L++ Y +GA+ + GL + L + + Sbjct: 6 LVNGFTLGLIYALIAVGYTMVYGVIELINFAHGEIYMLGAFLT-LSFISLGLPLPLAVLL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + A G+++ + + + D +A LI + L I G L F Sbjct: 65 AMLATAAIGVLLDIIAYRPLRDAPRLAALITAIGMSIFLQNLAMIIWGSR------PLPF 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + S V + + L + L + RT A R + NQ Sbjct: 119 PKQALPAFFSDPAVTFSDVTISWMQVSIYVVALLLMLGLNLIITRTRTGTAMRALAQNQT 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +AG + + + P M + + + +LGG+ Sbjct: 179 AAALMGINVNRVISFTFALGSGMGAVAGIMVSMYYNTMYPTMGYLA-GVKAFAAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L L G + + + LVI+ R Sbjct: 238 GSVPGAMLGGVVLGIAETLGAGYIS-------------SPYRDGVAYAVMILVIIFRPSG 284 Query: 339 LLRL 342 LL Sbjct: 285 LLGR 288 >gi|120611831|ref|YP_971509.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120590295|gb|ABM33735.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax citrulli AAC00-1] Length = 336 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 122/278 (43%), Gaps = 14/278 (5%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + + + + +IL++ + A L++++G G++S +GAY+ IL Sbjct: 37 PTIAQALDEGFYIGVASRILVFALAATSLNLILGFGGMVSFGHAAFVGVGAYAVGILMQE 96 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 S W+ P + ++GL SL+ +G Y + TL +++ +++ K G+ Sbjct: 97 GIASAWIAWPAAIAAGALFAFVIGLVSLRTQGVYFIMITLAFAQMLFYLMVSLKA-YGGE 155 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ +A R P + + YY +L +C L + L Sbjct: 156 DGLSLASRSQVG-------------PWLDLADDARFYYCVLAICVLVFIGLARLLNARFG 202 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 +A + IR+N+ +L + KL+AF ++ A G+AGA A +SP ++S++ Sbjct: 203 HALQGIRENETRMAALGFPVYRTKLAAFTLAGAIAGLAGALLANQAGFVSPAALQWSQSG 262 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 +++ +VILGG+ L + + E+ ++ Sbjct: 263 MLMVMVILGGVGRLYGGFVGAVAFLLIEEVLAAHTMHW 300 >gi|91787290|ref|YP_548242.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91696515|gb|ABE43344.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 377 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 99/355 (27%), Gaps = 37/355 (10%) Query: 11 YDKILCLLAVVYPLLLFLFLGA-----TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + + L V + L L Y ++ +I+ Y + A + ++ G G+ Sbjct: 27 WSAFMIALIAVCAVAPVLNLWVPQGSMFHMSTYAVALLGKIMCYAICALAMDLIWGYTGI 86 Query: 66 LSLNCVIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIM 110 LSL + +A+G Y+ + W ++P S + + Sbjct: 87 LSLGHGVFFALGGYAMGMYLMRQIGRDGNYKSDLPDFMVFLDWKVLPWHWTFSDSFVATL 146 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 L + + A + + R F Sbjct: 147 ILIVAVPGLVAFVFGYFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFK 206 Query: 171 RFPSSFVIYEIFMYYVLLGM---CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 R + + + + WL + + IRD + Sbjct: 207 RILNIPLATPSMRMVLFVLTGLTLLGFFLFAKWLVGSKFGRVLQAIRDAETRVMFSGYNP 266 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + KL+ + +S+ G+AGA + I+P + +I + +GG SL Sbjct: 267 LGYKLTIWVISAVMCGVAGALYVPQVGIINPGEMSPANSIEIAIWAAVGGRASLIGPIVG 326 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 I+ G ++ + V L + ++ L Sbjct: 327 AFIVNGAKSWLT--------------VAYPEFWLYFLGALFIGVTLFLPNGVVGL 367 >gi|254453759|ref|ZP_05067196.1| urea ABC transporter, permease protein UrtC [Octadecabacter antarcticus 238] gi|198268165|gb|EDY92435.1| urea ABC transporter, permease protein UrtC [Octadecabacter antarcticus 238] Length = 410 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 103/364 (28%), Gaps = 37/364 (10%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + L + + + S ++ ++G + L + A + +V G G+LSL Sbjct: 14 WFLAGLAIFTLGVTFMSEAAGVDMISTSFLKTLG-KTLCLCLVAIAMDVVWGYCGILSLG 72 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLL-------------------------------IPV 98 + IG YS + + P Sbjct: 73 HFAFFGIGGYSIGMWLMYARTEGIVATSLESAALPPTPQEITDAIGSQIFGVVGSSDFPA 132 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + + + L L L + + A + Sbjct: 133 LWAFSHSLPLQLLAVVLAPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYFFQNDT 192 Query: 159 LGTTVRSLIRFFRFPS----SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 L P + ++ ++ + + ++ + R IR Sbjct: 193 GLRGNNGLSGLQNIPGLEARGQAVVSLWFFWASALALGMGYVLFAYVVSGKFGSVIRAIR 252 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 DN+ L + KL F +++ G+AGA + I+P +I + V Sbjct: 253 DNEARVRFLGYHVEHYKLFIFTLTAMVAGVAGALYYPQAGIINPTEIAPIASIYLAVWVA 312 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG L A++ + G + N ++ + L+ ++ LV L Sbjct: 313 IGGRGRLYGAVIGAALVSLMSSWFTGGSAPNINLGF-YEIKWTDWWLVLLGVSFVLVTLY 371 Query: 335 RSHS 338 Sbjct: 372 FPKG 375 >gi|163845492|ref|YP_001623147.1| hypothetical protein BSUIS_B1406 [Brucella suis ATCC 23445] gi|163676215|gb|ABY40325.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 570 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|254248178|ref|ZP_04941498.1| Branched-chain amino acid ABC-type transport system, permease component [Burkholderia cenocepacia PC184] gi|124874679|gb|EAY64669.1| Branched-chain amino acid ABC-type transport system, permease component [Burkholderia cenocepacia PC184] Length = 314 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 17/305 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+++ G +G++++ IGAY+ + L PV Sbjct: 27 LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTVYLFSWFSQNVWHALTPVYFFF 86 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + L + +L W + + Sbjct: 87 AIVAAFALAFAAGWLAEWAL--IRHLYKRPLDTLLATWGLSLGMQQVFRSTFGPKEVSPA 144 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + + +V+ ++ ++L L R+ R N+ + Sbjct: 145 LPDWLMGSWEPTPGLDIPVSGMFVMGLALLMTGGLLLALYRSRWGLRVRATVANRPMANA 204 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AGA F A + + +V GG SL Sbjct: 205 AGINTRRTDRMTFAIGCGIAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 262 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + L ++ + +++++R L Sbjct: 263 GTVASAFGIAQMQSISEFFLS-------------GSIARVLTLLTVVVILMLRPQGLFAS 309 Query: 343 RTPSN 347 + Sbjct: 310 KVRRV 314 >gi|229004724|ref|ZP_04162460.1| Branched chain amino acid ABC transporter, permease [Bacillus mycoides Rock1-4] gi|228756517|gb|EEM05826.1| Branched chain amino acid ABC transporter, permease [Bacillus mycoides Rock1-4] Length = 287 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 107/292 (36%), Gaps = 31/292 (10%) Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIM 110 I++G G++S + + IGAY + S + I ++ ++S I+ Sbjct: 1 MSFDILLGYTGIVSFGHCMFFGIGAYCVALLLDRQEVSIASFLIGIGIAVVLSAIISYII 60 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 G+ SL+ + + A+ TL +S++F + KW+ T+G G F Sbjct: 61 GMLSLRLKSHFYAMLTLAISQLFFVLAEKWRSFTHGGDGFTFRVPDMFRDRF-------- 112 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 YY+ L + ++ +++I + I N++ +L I+ Sbjct: 113 -----------TFYYITLICLVVIFLLLRLFTQSSIGKVLKAISQNEQRVEALGYKILHY 161 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 K+ A V+ ++G F + ++ +F + + + ++GG+ +L I Sbjct: 162 KIIASIVAGVVAALSGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLVGAIAGAGI 221 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + R T + + +V+L L Sbjct: 222 IEFLKYYLSELAA---------QYPIFERWTIFLGLLYIIVLLGFPTGLTGT 264 >gi|144897498|emb|CAM74362.1| ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum gryphiswaldense MSR-1] Length = 324 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 119/301 (39%), Gaps = 26/301 (8%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 R + IL +LA+ P ++ ++ L + +FA ++++G +G Sbjct: 16 PSRQTIFVGILLVLALAAPFAVYPVF------------LMKGLCFALFAAAFNLMLGYVG 63 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 LLS + + AY +GL+ + I + + G ++G +++ +G Y A+ Sbjct: 64 LLSFGHAMFFGWSAYITAHAAKEWGLTPEIAILLGTFCAAGLGAVVGWLAIRRQGIYFAM 123 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL ++++ + ++ ++ + R F + + MY Sbjct: 124 ITLALAQLMYFVALQA--------------PFTHGEDGIQGVPRGHLFGLIDLSDTMNMY 169 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y +L + L+ + + + + IRDN+ SL + KL AF +S+ GM Sbjct: 170 YFVLAVFVLAILFLYRVVHSPFGQVLKAIRDNEPRAISLGYQVHRYKLIAFIISAGLSGM 229 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG+ + S + + V+ + +LGG+ ++ +++ + + Sbjct: 230 AGSVKSLVFQLASLADVHWHASGEVVLMTLLGGVGTIFGPTAGAYLVVTIQNYFASAGSW 289 Query: 305 Y 305 Sbjct: 290 V 290 >gi|262203721|ref|YP_003274929.1| ABC transporter-like protein [Gordonia bronchialis DSM 43247] gi|262087068|gb|ACY23036.1| ABC transporter related protein [Gordonia bronchialis DSM 43247] Length = 924 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 126/334 (37%), Gaps = 18/334 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L + + L A L+ L + I +I+ + A +V G G +S Sbjct: 316 LGRSPRPRHLFAGTIIGLVIGVLALLATTGSARLAVILTIIFAVIALSQVVVTGYAGQVS 375 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L + +GAY+ + G+ + ++A+++ G+++GLP+L+ RG L +ATL Sbjct: 376 LAQLTLAGVGAYALSRFTADLGVPFPVAPLLAALVALVVGVVIGLPALRVRGLPLMVATL 435 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ + + + G G V F + I V Sbjct: 436 ALAVFCEAFWFRNPSVNGGLQGAPVDSPSIFGVD--------LGIGAGEGYPRIAFGIVC 487 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + L+A + LRR+ + +R N+++ + + KL AFA ++ G+ G+ Sbjct: 488 LVVLALAALAVAALRRSRYGASMLAVRANERSAAAAGINVGVTKLVAFAAAAFLAGLGGS 547 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 A + + + + + ++ + G+TS+S A + Sbjct: 548 LLAYQQTLATAGSYAVFAGLALFAVFFVAGVTSVSGALLAGLL----------APGGVLY 597 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L SF + + I L L ++ L+ Sbjct: 598 YLSDRFGSFGDYYLLISGILLVLTVITSPDGLIG 631 Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 80/308 (25%), Gaps = 29/308 (9%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW--- 93 + +Y L + S G+++ AY+Y L L Sbjct: 6 AFFLLGLGNGAVYAALGLALVMTFKSSGVVNFATGAVALYAAYTYAFLRQGVLLHPIPGF 65 Query: 94 -------------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 + + +I+ G+++ L + +A + S ++ Sbjct: 66 DARIDLGGRLGVGPALAGAVVIASVLGILLYLIVFRPMRSAPVLAKAVASIGLMLVIQAL 125 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + G V F ++ + L+ L Sbjct: 126 LALRVGADAPTVGPIFA-----------PQSFRVGDATVPTDRIWLAAVVVGLAVCAGLV 174 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 LR T A +++K + +S +A+SS + G A + Sbjct: 175 LRYTRFGVATEAAAESEKGALLTGLSPDRIAISNWALSSGTAAIGGVVIAPIVPL--NPV 232 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + ++ ++G S++ A ++ + + Sbjct: 233 AYSMFIVPALAAALVGNFASIALTVSAGLVIGMLQAEATNLQSLVDWMPDAGLAEAIPLV 292 Query: 321 TTLMVIAL 328 + + + Sbjct: 293 LIIGFLLI 300 >gi|240144010|ref|ZP_04742611.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Roseburia intestinalis L1-82] gi|257204046|gb|EEV02331.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Roseburia intestinalis L1-82] gi|291534911|emb|CBL08023.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Roseburia intestinalis M50/1] Length = 293 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 101/305 (33%), Gaps = 23/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IG Y + + G + + Sbjct: 5 SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGCYVVFLAMNGQGWPPLVAV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +S ++ G+++ + K +A LI + L + G + + Sbjct: 65 VLSVIVCTVLGIVIEKIAYKPLRRATPLAVLITAIGVSYFLQNAALLLFGADTKSFTNVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +L + A +++++++T A + ++ Sbjct: 125 TLPSLKLAG---------GSLTISGTTIVTVLACVIIMAGLMIFIKKTKAGQAMLAVSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ S +AG F ++ ++P I + + G Sbjct: 176 KDAAQLMGVNVNATISLTFAIGSGLAAIAGVLFCSAYPTLTPYT-GSMPGIKAFTAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ G +L + ++ L +V+L++ Sbjct: 235 GIGSI-------------PGALIGGILLGIIEILGRAYISSQLSDAIVFAVLIIVLLVKP 281 Query: 337 HSLLR 341 +L Sbjct: 282 TGILG 286 >gi|170747854|ref|YP_001754114.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] gi|170654376|gb|ACB23431.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] Length = 344 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 128/317 (40%), Gaps = 18/317 (5%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSR 87 + T + +++ L + GL+++ G GLLSL A+GAY+ + Sbjct: 30 IVPLTGTSYVFEALLTPFLALALAGLGLNLLTGYAGLLSLGSAAFMAVGAYAAFNLSLRL 89 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI-TNG 146 GL + + + ++ +++ G++ GLP+L+ RG YLA++TL L + I + Sbjct: 90 PGLPLPVSLLLAGLVAALAGLVAGLPALRLRGFYLAVSTLAAQFFVAWALNRIGWISDDS 149 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G+ A RL G + Y L + L + L + Sbjct: 150 PSGVITAPRLVVAGLSFDD--------------PRGRYLFSLSVVTLLTVLAWRLAASPT 195 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSE 265 IRDN+ A + + KL AFAVSS IG+AGA +A A + P F Sbjct: 196 GRDLVAIRDNETAARLVGVKVARTKLLAFAVSSFVIGIAGALWAFAYLRTVEPAGFNLDR 255 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + ++ IVI+GG+ +L ++ + L + + M ++ Sbjct: 256 SFQILFIVIIGGLGTLRGAFLGAGFIVVLPLLLARLGAALLGDGFDSG-TLEMVQRIVLG 314 Query: 326 IALFLVILMRSHSLLRL 342 + V++ L L Sbjct: 315 ALIVAVLIREPAGLAAL 331 >gi|163743368|ref|ZP_02150748.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161383362|gb|EDQ07751.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] Length = 400 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 97/363 (26%), Gaps = 36/363 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L + LL LG + + L + A + ++ G +G+LSL + Sbjct: 18 ILALFTLAVTLLSEGLGVGIVSTSLIKTLGKTLCLCLVAIAMDLIWGYVGILSLGHFAFF 77 Query: 75 AIGAYSYVILGSRYGLSIWL-------------------------------LIPVSAMIS 103 +G Y + + P+ + Sbjct: 78 GLGGYMIGMWLMYERTRDTVLASLSDAVLPPTDTEIRDAVAHQIFGVVGGDSFPLVWAFA 137 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 + + + L L L + + A + Sbjct: 138 DSLLLQLFLIVAVPGVLALTFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSGLRGN 197 Query: 164 RSLIRFFRFPSSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 L P + I+ ++ L I W + R IRDN+ Sbjct: 198 NGLSGLQNLPGLADVPQSLISIWFFWGSALALGLGYVIAAWAVSGKFGSVLRAIRDNETR 257 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 L ++ KL F ++ G+AGA + I+P +I + V +GG Sbjct: 258 VRFLGYSVEGYKLVMFTGTACVAGIAGALYYPQAGIINPAEMAPIASIYLAVWVAIGGRG 317 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 L + + G L F + ++ + LV L + Sbjct: 318 RLYGAVIGAVFVSLLSSWFTG-GQAPDVDLGLFTIRWVDWWQVVLGLGFVLVTLFAPKGI 376 Query: 340 LRL 342 L Sbjct: 377 GGL 379 >gi|83719219|ref|YP_443167.1| branched-chain amino acid ABC transporter permease/ATP binding protein [Burkholderia thailandensis E264] gi|257139397|ref|ZP_05587659.1| branched-chain amino acid ABC transporter, permease/ATP binding protein, putative [Burkholderia thailandensis E264] gi|83653044|gb|ABC37107.1| branched-chain amino acid ABC transporter, permease/ATP binding protein, putative [Burkholderia thailandensis E264] Length = 741 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 14 ALSWLALVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 73 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ + A G + G + + G A+ TL + E+ Sbjct: 74 GAFVAAHGFNRYGLPLPLVPLAGGVAGAAFGALFGFVATRRAGTAFAMITLGLGELVAAA 133 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + + Y ++ C +A Sbjct: 134 AWSVPDWFGGAGGVSI------------DRAAGPALAAWDFGKPMHAYALIAVWCVAAAV 181 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT + +RDN +L T + + ++ F G++GA + Sbjct: 182 AMRVLVRTPFARLANAVRDNPARVAALGTDPRRVRYAMAIAAAFFAGVSGALTLIDVEVA 241 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 242 TSESVGMLRSGAVLFATVIGGATAFFGPVVGAVLLTFFSVFVASVSRAW----------- 290 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 291 ----LLYLGLLFVAVVLAAPGG 308 >gi|323357254|ref|YP_004223650.1| branched-chain amino acid ABC transporter, permease components [Microbacterium testaceum StLB037] gi|323273625|dbj|BAJ73770.1| branched-chain amino acid ABC-type transport system, permease components [Microbacterium testaceum StLB037] Length = 412 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 88/290 (30%), Gaps = 26/290 (8%) Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL-PSL 115 S++ G+ G+ + +G + + GL+I++ + +I A G + Sbjct: 146 SLIYGTTGISNFAHGEMVTLGGLLAYLFANVLGLNIFVAGIIVVVICAAFGYFQDVGIWK 205 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 R L++ L++ I ++ +++ A Sbjct: 206 PLRKRRLSLTQLMIVTIGMSLALQYTFQFFIGASTVRI-----------VTANPIPVRLG 254 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 V + + + + L+L +T + A R + DN + + + Sbjct: 255 PVSLSVDSLVAMAIAVVVLIGVGLFLLKTRVGRATRAVSDNPALAAASGINVDGVVRLIW 314 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 ++A G++G + ++ M +++ S V LGG+ + I+ V Sbjct: 315 TTAAALAGLSGILLGLVLNGVNW-MTGMQLLLLLFSAVTLGGLGTAFGALFGALIIGMTV 373 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 EL F + R L + Sbjct: 374 ELTNIWLPGDFKYATALVLLILLLLV-------------RPQGLFGRKER 410 >gi|311693989|gb|ADP96862.1| inner-membrane translocator [marine bacterium HP15] Length = 318 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 117/326 (35%), Gaps = 26/326 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ + ++ ++ + ILI +F L +VG +GL++L + Y + Sbjct: 10 IVLAFFFIIALCIPLFLEANSFFVGKTTTILILSVFVMSLDFLVGRVGLVTLGHALFYGL 69 Query: 77 GAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 G Y +V+L Y ++ W+ IS +++G+ +L+ G Y + TL +S++ Sbjct: 70 GGYLFVLLTPEYEAVNFWVYAIYIMGISALVALVVGVVALRTSGIYFIMITLAISQMVYY 129 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L ++ F + YY+ L ++ Sbjct: 130 FFFDSLEFGG----------DDGLFIFMKPETSIFGLSFLDLDNPAHFYYLALLAVLITL 179 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I + + R N + +L I +L ++ + S AG FA Sbjct: 180 VAIKIILHSRFGRIVEASRLNPERTEALGYNIFAFRLISYIIGSTLAAYAGLLFALQYGY 239 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++P + + + + ILGGM ++ T G++ + M+ + Sbjct: 240 VNPQFLTWEMSGTALVMSILGGMGTIYGAILGTITYEGLLFIFEHMSDDW---------- 289 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 M A+ L++L+ L Sbjct: 290 -----MLFMGGAIILMVLLLRKGLAG 310 >gi|257462892|ref|ZP_05627298.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. D12] gi|317060515|ref|ZP_07925000.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. D12] gi|313686191|gb|EFS23026.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. D12] Length = 294 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 93/306 (30%), Gaps = 28/306 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95 I + IY + + G ++V G L++ +GAY+ + + IW Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYTSLFSIPIFQKMGFPIWAT 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + +I GM+ + + + I+ LI + L Sbjct: 67 IFPAMIICALLGMLTEKIAYRPLRNSPRISNLITAIGVSLFLENIFMKLFTPNTRAFPKV 126 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + + +L LS + +++ T A + Sbjct: 127 FSHTSIQIFGVSFNYGSMVT-----------ILLTLALSIGLHFFMKNTKYGKAMLATSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + FA+ SA +A + ++ ++ P M I +L Sbjct: 176 DYGAATLVGINVNLTIQLTFAIGSALAAIASVLYVSAYPQVQPLM-GSMLGIKAFIAAVL 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL + L F L +V+L++ Sbjct: 235 GGIGILPGAVIGGFILGIIESLTRAYLSSQLADAFVFG-------------ILIVVLLVK 281 Query: 336 SHSLLR 341 +L Sbjct: 282 PTGILG 287 >gi|170740176|ref|YP_001768831.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168194450|gb|ACA16397.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 290 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 89/304 (29%), Gaps = 26/304 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + + +Y + A GL++V G L +++ ++ + + +L + Sbjct: 12 LNGLMTGAVYALIALGLTLVYGVLHIINFAHGALLTCAMFAVWGASATAHVDPYLALIAV 71 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + G + + L+++ +L Sbjct: 72 VPLMFGLGYGLQRLVIGPASHGSDDNVLLVTLGLSIVLENALL-----------AAFRSD 120 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + S ++ L G ++ + L L RT A R + + Sbjct: 121 TRAIESDAALQVVEVGPLLLSTPRLIGLAGSLVVTGLLWLLLNRTDTGRAIRAVSREKLG 180 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + F + A +G+A + + ++ +IV+LGGM Sbjct: 181 ARLVGIEVDHVYAVTFGLGCACLGVAACLLMPTYYV--NPRSGAAFVLVAFTIVVLGGMG 238 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S++ ++ V + + + + LV+L+R L Sbjct: 239 SITGALVGGLVIGVVESFSGLILGDSLGQIG-------------IFLIFILVLLVRPTGL 285 Query: 340 LRLR 343 R Sbjct: 286 FGAR 289 >gi|227823058|ref|YP_002827030.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] gi|227342059|gb|ACP26277.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] Length = 300 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 101/313 (32%), Gaps = 35/313 (11%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY M A G ++V G +G+++ + +G + + + G Sbjct: 8 LVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLILTTFMAGVPVV 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L++ L++ V + + + + + +A LI + +L + +T G Sbjct: 68 LALLLMMVVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + + + + +++ L + + RT + A Sbjct: 128 KPIPPLVSSVYDLF------------GITVSLKQIIIVVITAVLLSVFWYIVNRTPLGRA 175 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + K L + F + +A +AG + + F+ + Sbjct: 176 QRATEQDSKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTD-GFAPGVKA 234 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 235 FTAAVLGGIGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFS-------------ILA 281 Query: 330 LVILMRSHSLLRL 342 +V++ + +L Sbjct: 282 IVLIFKPSGILGR 294 >gi|33596710|ref|NP_884353.1| putative high-affinity branched-chain amino acid transporter membrane protein [Bordetella parapertussis 12822] gi|33600476|ref|NP_888036.1| putative high-affinity branched-chain amino acid transporter membrane protein [Bordetella bronchiseptica RB50] gi|33568075|emb|CAE31988.1| Putative high-affinity branched-chain amino acid transporter membrane protein [Bordetella bronchiseptica RB50] gi|33573411|emb|CAE37395.1| Putative high-affinity branched-chain amino acid transporter membrane protein [Bordetella parapertussis] Length = 315 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 109/309 (35%), Gaps = 38/309 (12%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + GI L+ + A G +I+ G G S + Y +G+Y I ++ L Sbjct: 20 PWYGSDVMVQFGINTLLLAVLAQGWNIIGGYTGYASFGNSVFYGLGSYGVAIAMVQWELP 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + ++ A +++G+P L+ RG Y AIATL ++++ I+ + Sbjct: 80 FAAGLVFGVALALAFALLLGMPVLRLRGHYFAIATLALAQVMTAIVSNIEL--------- 130 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + + Y + L + L+ + WL R+ Sbjct: 131 --------------AGQNIGLVLPPLNNDPLFYELSLALLALATLAVAWLTRSRFGFGLI 176 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVI 270 IR+N++ + K++AFA+S F +AG A + P+ F N+ +I Sbjct: 177 AIRENEEGAAVMGVNTTLYKVAAFALSGVFSALAGGIHAYWITFLDPESAFDIGLNVKMI 236 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + + GG ++ L + EL + + Sbjct: 237 IMAVFGGAGTVLGPVVGAFSLSAISELLSS--------------EITSAAGLFFGVVIVA 282 Query: 331 VILMRSHSL 339 +++ L Sbjct: 283 AVVLMPRGL 291 >gi|188582809|ref|YP_001926254.1| urea ABC transporter permease [Methylobacterium populi BJ001] gi|179346307|gb|ACB81719.1| urea ABC transporter, permease protein UrtC [Methylobacterium populi BJ001] Length = 393 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 45/362 (12%), Positives = 101/362 (27%), Gaps = 36/362 (9%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N + K + ++++ + L + + ++ + L Y A GL I G G+LSL Sbjct: 21 NPFMKPIEWVSLLLLAGVILVVLPLMLDGFRLNLVGKYLTYAFVALGLVICWGYAGILSL 80 Query: 69 NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 + + +G Y + + L Sbjct: 81 GQGVFFGLGGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQITALPWFWQPFHSLPLT 140 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167 + +A L L + Sbjct: 141 LLLVVAVPVAFAFIISVAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 200 Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + + +Y+V G+ + +++++ + +R+ + + Sbjct: 201 RTLHGWDIRQDSAKFILYFVNGGLLIGCILMAQYVKKSKLGRILVAMREKEDRVRFSGYS 260 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + K+ AF +++AF + GA F +SP ++ ++ +GG SL Sbjct: 261 VAGFKVFAFCLAAAFAAIGGAMFTLQVGFMSPSFVGIVPSVEMVIYTAVGGRLSLFGAVW 320 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 T ++ F SF + V+L+ + L + Sbjct: 321 GTLLVNWAKT--------------SFSESFPDMWLFGLGALFIAVVLIFPNGLAGIWREH 366 Query: 347 NF 348 Sbjct: 367 IE 368 >gi|261312984|ref|ZP_05952181.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10] gi|261302010|gb|EEY05507.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10] Length = 289 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 123/310 (39%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G G+LS + AY +G+S L + + + Sbjct: 6 FLMKMLCFALFASAFNLLLGYTGILSFGHAAFFGGAAYVTAHAVKEWGVSPELGLVLGIL 65 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + A G+++G +++ +G Y + TL ++++F ++ Sbjct: 66 AAAALGLVIGYLAIRRQGIYSTMITLALAQMFFFFCLQASFTHG--------------ED 111 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F F + + MYY +L + L I + + +++R+N+ Sbjct: 112 GLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLGVFAIWRITNSPFGMILKSVRENENRAI 171 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL+AF +S+ G+AG A + + + VI + +LGG+ +L Sbjct: 172 SLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQFATLTDVSWQMSGEVILMTLLGGIGTL 231 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 A ++ + +F T + + +L+ ++ Sbjct: 232 IGPIVGAAFVVALQNWLATSDFPV---------------TIVTGLIFMACVLLFRKGIIG 276 Query: 342 LRTPSNFLER 351 S ++ Sbjct: 277 EFYASRIGKK 286 >gi|171058534|ref|YP_001790883.1| inner-membrane translocator [Leptothrix cholodnii SP-6] gi|170775979|gb|ACB34118.1| inner-membrane translocator [Leptothrix cholodnii SP-6] Length = 432 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 115/341 (33%), Gaps = 32/341 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 L ++ + L L L + +M Q+ I ++ ++++G G+L Sbjct: 6 PLKRHRGWIRLAMWGAYAALMLAAPLLWRSSFALTMLSQMGIAIIVCLAYNVLLGQGGML 65 Query: 67 SLNCVIAYAIGAYSYVIL-----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 S + +GAY + L + L+ ++G + + G Sbjct: 66 SFGHAVYSGLGAYLAIHTLNRVAAGDLALPVSLVPLAGGAAGLLFAALLGYVTTRKAGTS 125 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 A+ TL + E+ ++ + G+ GI + + +I Sbjct: 126 FAMITLGIGELVWSLALMLPEFFGGEGGIS------------ANRVVGPPVLGISFGPQI 173 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +Y+++ CF+ + + RT + +RDN + + + + AF VS F Sbjct: 174 ELYHLIAIYCFICTAALYAFTRTPLGRILNAVRDNPERVEFIGYSTRSVRWLAFMVSGLF 233 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+ G A + + ++ ++ + + + V LGG +++ + L + Sbjct: 234 AGIGGGLAALNFEIVTAEVLGAARSGAYLLFVFLGGAGFFVGPIIGAVLMVIALVLLSEL 293 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + ++++ + L Sbjct: 294 ---------------TAAWLLYLGLVFVVMVVAAPGGIASL 319 >gi|152987585|ref|YP_001350958.1| branched chain amino acid ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150962743|gb|ABR84768.1| probable permease of ABC branched chain amino acid transporter [Pseudomonas aeruginosa PA7] Length = 304 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 87/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 MINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIALALLAFFGLQNFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLLFTVLVTCTYGWVIERIAYKPLRNSTRLAPLISAIGMSLILQNYVQVAQGPRQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F FV ++L+ A + +R T + R + ++K Sbjct: 129 GIPTLLDGALKFHVGDGFVQLTYTKLFILVASLIGMAVLTYVIRCTRLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGMLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L GM + + F L L+++ R Sbjct: 248 GSLPGAMLGGLVLGVAEAQFSGMVNTDYKDVFAFS-------------LLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|317402525|gb|EFV83092.1| hypothetical protein HMPREF0005_02325 [Achromobacter xylosoxidans C54] Length = 321 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 111/304 (36%), Gaps = 32/304 (10%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLLIPV 98 +++L + +FA +++ G GL+S + Y+ + YG L + Sbjct: 32 FVMKVLCFALFALAFNLLTGFTGLVSFGHAAFFGWAGYAAGEMMILYGAAGLPPELAMLC 91 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ A G +G +++ G Y A+ TL +S++ + ++ Sbjct: 92 GVAMAAAIGYAIGWLAIRRTGIYFAMITLALSQVAYFMAVQVGWTRG------------- 138 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + R + + MYY LG+ L + + + +TIRDN Sbjct: 139 -EDGMQGIPRGKFLGLVDLSADTNMYYFALGVFVLGFLFVYRVIHSPFGQVLKTIRDNAP 197 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 SL KL AF +S++ G+AG+ A ++ + + + V+ + +LGG+ Sbjct: 198 RAISLGYDTDRCKLLAFVLSASVAGLAGSLKALVLQLVALNDVSLATSTEVLLMTLLGGI 257 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +++ + + T ++ + L + Sbjct: 258 GTVWGPVVGATLVVSLQNYLATLGDVV---------------TIVIGLIFVLCVSFFRRG 302 Query: 339 LLRL 342 + Sbjct: 303 FVGE 306 >gi|193222437|emb|CAL63364.2| Putative ABC-type branched-chain amino acid transport system, permease component [Herminiimonas arsenicoxydans] Length = 316 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 101/313 (32%), Gaps = 8/313 (2%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + +Y+ + + +IY M A G ++ G L ++ + +GA++ + S L Sbjct: 7 AMSVIGQYVFNGLMLGMIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFA-GLTASTGVL 65 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + P +++ + L + L + +L T + + Sbjct: 66 MLDIGSPWIRLLAVVLAAVCVTGLLGAAIAKWLVLPLHKAPPLNTLLATLMLGTVMREAV 125 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + SL+ +LL + A + + RT + A Sbjct: 126 RLFYPDGSNSQPFPSLLPTDAIEFGGFALRADNVILLLSGLAIIAGVHFLITRTRLGMAI 185 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + + + + L FA+ S +AG + I+ ++ +I Sbjct: 186 RAVAQDGETARLMGINFEAVVLLTFALGSGMAALAGVMNGLYYNEINFNV-GLLLGVIGF 244 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + ILGG+ ++ + G+ L ++ + + + Sbjct: 245 AAAILGGLGNIYGAIIGGFLFAGLQVLGSATLPALIPNI------PSAYKDVFAFAVVII 298 Query: 331 VILMRSHSLLRLR 343 ++ + L+ + Sbjct: 299 LMAWKPTGLIAEK 311 >gi|170078700|ref|YP_001735338.1| permease protein of branched-chain amino acid ABC transporter [Synechococcus sp. PCC 7002] gi|169886369|gb|ACB00083.1| permease protein of branched-chain amino acid ABC transporter [Synechococcus sp. PCC 7002] Length = 316 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 102/318 (32%), Gaps = 27/318 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----------SRY 88 + + +Y +FA G ++V LG+++ + +GAY + ++ Sbjct: 10 LLNGLSIGSVYAIFALGYTLVFSILGIINFAHGAIFTLGAYFTYLFAGGQFGFNGFLAQV 69 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 L L ++ +I + + L + + L I NG Sbjct: 70 KLPFALPFGLALLIGCGFAGCVSMLVEWLAFRPLRLRGADPLLSLVSSLGAAVVIVNGIQ 129 Query: 149 GIYVADRLYFLGTTVRSLI--RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + A+ F L F P ++ +L + + + RT Sbjct: 130 LLVGAEIYTFPADIYGGLPESINFGSPERPILIRTVQLIILTVSALVVTLLTYGMTRTKF 189 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A + + ++ L F VS A G+AG +S I+ F S Sbjct: 190 GKAIQAVAEDSTTASLLGINTEQVVRVTFFVSGALAGLAGTLVGSSV-SIAGPYFGISYG 248 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + + +++LGG+ ++ I+ F+ + Sbjct: 249 LKGLGVIVLGGLGNIPGAVLGGLIIGMAEAFI--------------PADFSGYREAIAFA 294 Query: 327 ALFLVILMRSHSLLRLRT 344 LF ++L+R LL +T Sbjct: 295 LLFGMLLLRPQGLLGQKT 312 >gi|56696588|ref|YP_166947.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56678325|gb|AAV94991.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 409 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 111/366 (30%), Gaps = 36/366 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + L L ++ +L S +I ++G + L + A + ++ G G+LSL Sbjct: 15 FLAALALFTLIVSVLSEGLGTGIISTSFIKTLG-KTLCLCLIAVAMDLIWGFAGILSLGH 73 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGLP 113 + +G Y + + ++ + + L Sbjct: 74 FAFFGLGGYMIGMWLMYERTRLIVVESLSQSEIPPTEAEVIDAIGNQIFGVVGSSEFPLI 133 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY-----------------VADRL 156 +L + +++ ++ W + G+Y D Sbjct: 134 WAFADSLFLQLLLVLLVPGLLALIFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSG 193 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + L +S + ++ + L + WL + R IRDN Sbjct: 194 LRGNNGLSGLQNLPGVDASQDVVSLWFLWSSALALGLGYVLAAWLVSGKFGSVIRGIRDN 253 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++ KL F +++ +AGA + ++P +I + V +G Sbjct: 254 EARVRFLGYSVETYKLVIFTLTACIAAIAGALYYPQAGIVNPAEIAPIASIYLAVWVAIG 313 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G L TA + + G + + L+ ++ V L+ Sbjct: 314 GRGRLYGAVIGTAFVSLLSTWFTGGQAPDVPLGF-YTIKWVDWWLVLLGLSFVAVTLLAP 372 Query: 337 HSLLRL 342 + L Sbjct: 373 KGMGGL 378 >gi|315655906|ref|ZP_07908804.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] gi|315489970|gb|EFU79597.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] Length = 294 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 101/303 (33%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ +GAY+ L + + Sbjct: 8 LINGLSLGSIYALIALGYTMVYGIIQLINFAHGDVLMVGAYAGFAGMVLLHLDPFTSLLA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I GM++ + K IA LI + ++ G + + Sbjct: 68 AMIICAILGMLIERLAYKPLRHSTRIAVLITAIGMSLLIEYVTMYFVGAEARAYPAQTGW 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + V + +++ L + +++T I A R + +Q Sbjct: 128 LSA---------SYHFGGVNLSMIQIIIVVVSVILMVVLQFIIKKTRIGKAMRAVSQDQD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + ++ FA+ SA G AG + I+P M + +LGG+ Sbjct: 179 AAKLMGISVDNTISFTFALGSALAGAAGVLWGLYYTSITPLM-GIMPGLKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + ++ + + + F F + L +V++ + Sbjct: 238 GLIPGALVGGYLVGLLETIVNSLGLSTFRDAAVF-------------LVLIIVLIFKPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|298345500|ref|YP_003718187.1| branched subunit amino acid ABC transporter permease [Mobiluncus curtisii ATCC 43063] gi|298235561|gb|ADI66693.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Mobiluncus curtisii ATCC 43063] Length = 294 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 102/303 (33%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ +GAY+ L + + Sbjct: 8 LINGLSLGSIYALIALGYTMVYGIIQLINFAHGDVLMVGAYAGFAGMVLLHLDPFTSLLA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I GM++ + K IA LI + ++ G + + Sbjct: 68 AMIICAILGMLIERLAYKPLRHSTRIAVLITAIGMSLLIEYVTMYFVGAEARAYPAQTGW 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 LG + V + +++ L + +++T I A R + +Q Sbjct: 128 LGA---------SYHFGGVNLSMIQIIIVVVSVILMVVLQFIIKKTRIGKAMRAVSQDQD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + ++ FA+ SA G AG + I+P M + +LGG+ Sbjct: 179 AAKLMGISVDNTISFTFALGSALAGAAGVLWGLYYTSITPLM-GIMPGLKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + ++ + + + F F + L +V++ + Sbjct: 238 GLIPGALVGGYLVGLLETIVNSLGLSTFRDATVF-------------LVLIIVLIFKPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|218782728|ref|YP_002434046.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218764112|gb|ACL06578.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 325 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 116/332 (34%), Gaps = 26/332 (7%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 KI L+ L ++ I I +FA L++++G GLLS Sbjct: 2 TKIWIKTLAAIILIGVLIAFPKVMGVLNTNIFIGFAIMALFAVSLNLMLGYTGLLSFGHA 61 Query: 72 IAYAIGAYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + + +GAY+ + + + + + + C +I+ ++ G ++ TL Sbjct: 62 MFFGLGAYTTALSLKHIDNLPISMALLLGVLGAVVCAVIVSPLLVRLSGTAFSMLTLAFG 121 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 ++ + +K++ +T G G+ + + YY + + Sbjct: 122 QLMYIVCLKFREVTGGADGLGGFPVPDLKIPFTGGIDM---------TDPVNFYYFAITV 172 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 +I +T I + +IRDN L + K F VS F G AGA +A Sbjct: 173 LGGCILLIWRFTKTPIGSVMISIRDNDNRVDYLGFHVPSVKSLVFIVSGGFAGAAGAIYA 232 Query: 251 ASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 ++ +S D + I + I+GG++S + L Sbjct: 233 LFQNMVSTDGVLGLFTSFNPIIMTIIGGVSSFTGPIIGA---------------GLLTLL 277 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +F + R + L L+I ++ Sbjct: 278 EEFLLRYTDRIALFNGLVLILMIKFAPGGIMG 309 >gi|116255605|ref|YP_771438.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115260253|emb|CAK03357.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 329 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 122/310 (39%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +GL L I + Sbjct: 42 FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKEWGLPPELGILIGVA 101 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G++MG +++ +G Y A+ TL +S++F ++ + Sbjct: 102 GAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEG--------------ED 147 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MYY +L + + II + ++IR+N++ Sbjct: 148 GIQSVPRGHLFGFIDLNSSTNMYYFVLAVFLVGILIIWRFINSPFGMILKSIRENEQRAI 207 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AGA + + + + VI + +LGG+ +L Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ + F T + I + +L+ ++ Sbjct: 268 IGPLFGAGLVVVLENYLATSEFPV---------------TIITGIVFMVCVLIFRRGIIG 312 Query: 342 LRTPSNFLER 351 S + Sbjct: 313 EFYASRLGRK 322 >gi|282857802|ref|ZP_06267010.1| inner-membrane translocator [Pyramidobacter piscolens W5455] gi|282584363|gb|EFB89723.1| inner-membrane translocator [Pyramidobacter piscolens W5455] Length = 356 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 71/332 (21%), Positives = 138/332 (41%), Gaps = 23/332 (6%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + L + ++L + + + M + I Y++ A L++VVG LG LSL Sbjct: 12 ARRVYGTYALVTLAYVILQIMISTRTLSSSMKGMLVPICAYMVMAVVLNLVVGVLGELSL 71 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLL-------IPVSAMISGACGMIMGLPSLKFRGDY 121 ++GA++ V + L + A + G ++G+P L+ +GDY Sbjct: 72 GHAGFMSVGAFTGVACAILLQDLVPLAPLRLSVSMAAGAASAALAGFLIGIPVLRLKGDY 131 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 LAI TL EI +++L + + G++ + G + I +I Sbjct: 132 LAIVTLAFGEIIKSVLNNFYMGVDKA-GLHFSMLSDKTGLAPGGRLIVGGPMGIGGIRKI 190 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + + ++ ++ L + + A++ +RD++ A S+ + K++AF VS+A Sbjct: 191 ATFGTGFALVMIALVVVYNLINSRLGRAFQAVRDDRIAAESVGIDVTRYKMTAFVVSAAL 250 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G AG FA + I + F F+ +I+++ V+LGG ++ A A L + E Sbjct: 251 AGAAGCLFAMNYSTIVANKFDFNTSILILVFVVLGGQGNMLGSIVAAAALTILPEKLREF 310 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 Y + + L ++L Sbjct: 311 RDY---------------RMLIYAVLLIAIML 327 >gi|39936867|ref|NP_949143.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] gi|192292696|ref|YP_001993301.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|39650724|emb|CAE29247.1| permease of ABC transporter,putatively for branched chain amino acuds [Rhodopseudomonas palustris CGA009] gi|192286445|gb|ACF02826.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 305 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 101/312 (32%), Gaps = 28/312 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90 + + + IY + A G ++V G +G+++ + IG + +I + L Sbjct: 8 LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSFGLTFVPL 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ VS I+ G + + + +A ++ + +L+ + ++ G Sbjct: 68 ILLVVLLVSMAITALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLMNYAQVSQGARVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V + T S F V V++ L + +T + Sbjct: 128 PVPPIITGGYTLHESADGFN------VQLSNVQILVVVTTVVLLGIFTWLVAKTRLGRDM 181 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +Q L + F + +A +AG + I M F I Sbjct: 182 RACEQDQTMAALLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLIDFFM-GFIAGIKAF 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL ++ + + + F L + Sbjct: 241 TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFSVEYKDVAAFS-------------ILII 287 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 288 VLIFMPTGLLGR 299 >gi|90420353|ref|ZP_01228261.1| urea short-chain amide or branched-chain amino acid uptake, UrtC, ABC permease component [Aurantimonas manganoxydans SI85-9A1] gi|90335687|gb|EAS49437.1| urea short-chain amide or branched-chain amino acid uptake, UrtC, ABC permease component [Aurantimonas manganoxydans SI85-9A1] Length = 387 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 97/349 (27%), Gaps = 33/349 (9%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 + + V L Y + + + Y + A L +V G +G+LSL Sbjct: 18 ILAAAILVPMANLWLPASHPLHVPSYAVPLFGKYVCYALLALALDLVWGYVGILSLGHGA 77 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 +A+G Y+ + R S + LP + D A L++ Sbjct: 78 FFALGGYAMGMYLMRQIGSRGVYGDPVLPDFMVFLNWQELPWYWYGFDQFWFAALMVVLA 137 Query: 133 FQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFP 173 + + + D + + F Sbjct: 138 PGILAFVFGYFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKELLGFS 197 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 ++ ++ I+ W+ R+ + +RD + + KL Sbjct: 198 LQADTTRAGLFAASCIALAVAVVIVGWITRSRLGKLMVAVRDAESRTRFIGWRPEHVKLF 257 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF VS+ G+AGA + I+P F +I ++ +GG +L ++ Sbjct: 258 AFTVSAVMAGIAGALYVPQVGIINPGEFAPVNSIEIVVWAAVGGRGTLIGPVIGALLVNF 317 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F ++ V L ++ Sbjct: 318 --------------GKSTFTAIAPEFWLFVLGSLFVFVTLFLPRGIVGT 352 >gi|152981508|ref|YP_001352347.1| branched chain amino acid ABC transporter permease [Janthinobacterium sp. Marseille] gi|151281585|gb|ABR89995.1| Branched-chain amino acid ABC-type transport system, permease components [Janthinobacterium sp. Marseille] Length = 309 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 101/307 (32%), Gaps = 8/307 (2%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ + + +IY M A G ++ G L ++ + +GA++ + S L + + Sbjct: 6 QYVFNGLMLGMIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFA-GLTASTGVLMLDISS 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P +++ + L I L + +L T + + + Sbjct: 65 PWIRLLAVVLSAVCVTGLLGAAIAKFLILPLHKAPPLNTLLATLMLGTVMRESVRLFYPD 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 SL+ + +L+ + A + + RT + A R + + Sbjct: 125 GSNSKPFPSLLPTGSVDIGTLALRADNVILLISGLAIIAGVHFLITRTRLGMAIRAVAQD 184 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + L FA+ S +AG + I+ ++ +I S ILG Sbjct: 185 GETARLMGINFEAVVLLTFALGSGMAALAGVMNGLYYNEINFNV-GLLLGVIGFSAAILG 243 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + + L + ++ + + +++ + Sbjct: 244 GLGNIYGAILGGFLFAALQVLGSALLPALIPNI------PSAYKDVFAFAVVIILMAWKP 297 Query: 337 HSLLRLR 343 L+ + Sbjct: 298 TGLIAEK 304 >gi|126450053|ref|YP_001080287.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei NCTC 10247] gi|126242923|gb|ABO06016.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei NCTC 10247] Length = 746 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHSFNRYGLLLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|268590795|ref|ZP_06125016.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Providencia rettgeri DSM 1131] gi|291313574|gb|EFE54027.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Providencia rettgeri DSM 1131] Length = 308 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIP 97 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 LLNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAGLMMLGIDIGWI 71 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + A A ++ I I + R Sbjct: 72 LVAAAFIAAIVVSSAYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ L++R + + A R ++ Sbjct: 132 ALPSLITGQWVLGESDGFEATVTKMQLTIWVVTVLAMLALTLFIRYSKMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL + + ++ F L V+L+ Sbjct: 251 IGSIPGAMLGGLILGVAEAMTSAYLSTEYKDVVSFG-------------LLIGVLLIMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|113867533|ref|YP_726022.1| ABC-type transporter, permease component [Ralstonia eutropha H16] gi|113526309|emb|CAJ92654.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 437 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 118/338 (34%), Gaps = 32/338 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + + +L+ L L + + ++ Q+ I ++FA ++++G G+LS Sbjct: 21 RPLNLARWIIWSLTVLVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFG 80 Query: 70 CVIAYAIGAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 + +GA+ ++ + L + +L V + G+I G + K G A+ Sbjct: 81 HAVYSGLGAFIAVHVLNMVGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKSGTTFAM 140 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 T+ + E+ + + G+ GI + + F +Y Sbjct: 141 ITMGIGEMVFASSLMFPEFFGGEGGIS------------TNRVVGDPFLGITFGPGRQVY 188 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++ C LS + +T + +RDN + + + +S+ F G+ Sbjct: 189 YLIAAWCLLSMVAMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRYLVLILSAFFAGI 248 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA A + + +S + + V+ V +GG + + + Sbjct: 249 AGALGAINFEIVSAENVSAVRSGGVLLAVFIGGAGVFFGPIIGAVVFVLFAVALSDLTKA 308 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + L+++ L L Sbjct: 309 W---------------LLYLGLFFVLMVMFVPGGLASL 331 >gi|33594578|ref|NP_882222.1| branched-chain amino acid transport system permease [Bordetella pertussis Tohama I] gi|33564654|emb|CAE43976.1| branched-chain amino acid transport system permease [Bordetella pertussis Tohama I] gi|332383989|gb|AEE68836.1| branched-chain amino acid transport system permease [Bordetella pertussis CS] Length = 320 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 116/301 (38%), Gaps = 29/301 (9%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y+ ++ + IY + A GLS++VG G +SL IGAY+ I R+ + W Sbjct: 19 TGNAYLINLFVVCAIYALPAIGLSLLVGHCGQISLGHAAFVGIGAYAAAIASQRWDMDPW 78 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + +A ++ A +G + RG +LA+ATL + I +L++W +T G GI VA Sbjct: 79 LAVLFAAALACAAAWAVGKLVFRLRGHHLAMATLALGMIVHTVLVEWHDVTGGPDGISVA 138 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L + S + + ++ + L R+ A R + Sbjct: 139 GVLKVGSLELASDP--------------AFFVLGWLAVIVALILADNLIRSPFGLALRVV 184 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +++ S+ K S A G++G + ISPD F + +I ++ IV Sbjct: 185 GESELVAGSIGIAPARVKQLIMMASGALAGLSGGLYTFWTGYISPDPFNVALSIKLLLIV 244 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 L G T + ++ V E L + L L +L Sbjct: 245 ALSGFTGTWRTLVGVFFVVLVSEGMKSF---------------GHLDVILYGLLLILTML 289 Query: 334 M 334 Sbjct: 290 F 290 >gi|261819468|ref|YP_003257574.1| branched-chain amino acid transporter permease subunit LivH [Pectobacterium wasabiae WPP163] gi|261603481|gb|ACX85967.1| inner-membrane translocator [Pectobacterium wasabiae WPP163] Length = 308 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 96/312 (30%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y I+ + + Sbjct: 12 MFNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +IS A G + + + + LI + L + + G Sbjct: 72 LISVAFIAAVVISSAYGWSIERVAYRPVRTSKRLIALISAIGMSIFLQNYVSLNQGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + V + + ++ L++R + + A Sbjct: 129 ----RDVALPSLVTGQWVLGESNGFTATISTMQLTIWIVTFLAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L + F + + +AG I+P F + Sbjct: 185 RACAEDLKMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + + F L + Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIV 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|322834880|ref|YP_004214907.1| inner-membrane translocator [Rahnella sp. Y9602] gi|321170081|gb|ADW75780.1| inner-membrane translocator [Rahnella sp. Y9602] Length = 308 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 82/290 (28%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 +++ + I I + R Sbjct: 72 LIGAGFIAAIVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWKLGETNGFAATISTMQLIIWVVTFVAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L + F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ IL L + ++ F + I Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDVVSFALLIVVLLVLPTGIL 300 >gi|170740508|ref|YP_001769163.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168194782|gb|ACA16729.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 281 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 120/305 (39%), Gaps = 42/305 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 S+ I + + A + +V+ G LSL +GAY+ +L + G+ + + Sbjct: 12 YQSLIHGIGVNGILALSIYVVLAV-GQLSLGQAAFMGVGAYTGALLTVKAGVPFPVAMAG 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A + +++G P+L+ G YLAIAT+ + EI + + + W G G+ Sbjct: 71 AAAVPALIALVVGGPTLRLTGVYLAIATIGLGEITRIVFLNWDY-AGGALGLSGIPEKGG 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +G + G + ++ + R+ I A +R+++ Sbjct: 130 VG-------------------------AIYGTLAAALLALVLIARSRIGRAMEAMREDEA 164 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + +++A VSSA G+AG A I P+ + F + ++S +LGG+ Sbjct: 165 AAGVMGVNLPRYRMTALVVSSALAGLAGCLSAHVSSFIGPNEYGFETAVTILSYALLGGI 224 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S AIL + E+ + + + + + L +L Sbjct: 225 GSPVAPVLGAAILTLLPEVLRPLADF---------------RLMVNGLIIVLAVLFMPRG 269 Query: 339 LLRLR 343 +L R Sbjct: 270 ILPWR 274 >gi|161523267|ref|YP_001578279.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|160340696|gb|ABX13782.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] Length = 324 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 133/324 (41%), Gaps = 16/324 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+Y +LL L A Y + ++L + +FA ++++G GLLS + A Y Sbjct: 5 VLYGVLLAALLVAPFVGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 63 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + G + L + I+ G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 64 ATGYSMQTLGFTPELGVLAGTAIATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 123 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ + R F + ++ +YYV+L + + + I+ Sbjct: 124 A--------------PFTHGEDGLQGVPRGRLFGLLDLSNDLALYYVVLVVIVAACAFIV 169 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + I++N+ SL KL AF +S+ G+AG+ + Sbjct: 170 RIVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 229 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318 ++ + +V+ + ++GGM +L A+++ + + + + + + + + S Sbjct: 230 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 289 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 290 SATIVTGLIFIACVLAFRRGIVGE 313 >gi|150397597|ref|YP_001328064.1| inner-membrane translocator [Sinorhizobium medicae WSM419] gi|150029112|gb|ABR61229.1| inner-membrane translocator [Sinorhizobium medicae WSM419] Length = 300 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 102/313 (32%), Gaps = 35/313 (11%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY M A G ++V G +G+++ + +G + + I G Sbjct: 8 LVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLILTTFIGGVPVV 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L++ +++ V + + + + + +A LI + +L + +T G Sbjct: 68 LALLIMMIVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + + + + +++ L + + RT + A Sbjct: 128 KPIPPLVSSVYEIF------------GITVSLKQIVIVVITAILLSVFWYIVNRTPLGRA 175 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + +A +AG + + F+ + Sbjct: 176 QRATEQDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTD-GFAPGVKA 234 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 235 FTAAVLGGIGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFS-------------ILA 281 Query: 330 LVILMRSHSLLRL 342 +V++ + +L Sbjct: 282 IVLIFKPSGILGR 294 >gi|257467350|ref|ZP_05631661.1| branched chain amino acid ABC transporter permease [Fusobacterium gonidiaformans ATCC 25563] gi|315918480|ref|ZP_07914720.1| branched-chain amino acid transport system permease livH [Fusobacterium gonidiaformans ATCC 25563] gi|313692355|gb|EFS29190.1| branched-chain amino acid transport system permease livH [Fusobacterium gonidiaformans ATCC 25563] Length = 294 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 28/306 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95 I + IY + + G ++V G L++ +GAY+ + + IW Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYTSLFSIPIFQKMGLPIWAT 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + +I GM+ + + + I+ LI + L Sbjct: 67 IFPAMIICALLGMLTEKIAYRPLRNSPRISNLITAIGVSLFLENIFMKLFTPN------- 119 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + +L LS ++ L+++ T A + Sbjct: 120 ----TRAFPKVFSQVSIHLFGISFNYGSVITILLTLTLSIALHLFMKNTKYGKAMLATSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + F FA+ SA +A + ++ ++ P M I +L Sbjct: 176 DYGAATLVGINVNFTIQLTFAIGSALAAIASVLYVSAYPQVQPLM-GSMLGIKAFIAAVL 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL + L F L +V+L++ Sbjct: 235 GGIGILPGAVIGGFILGIIESLTRAYLSSQLADAFVFG-------------ILIIVLLVK 281 Query: 336 SHSLLR 341 +L Sbjct: 282 PTGILG 287 >gi|297544138|ref|YP_003676440.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841913|gb|ADH60429.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 304 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 94/303 (31%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GA++ + +S + Sbjct: 18 LINGISVGSIYALIALGYTMVYGIIKLINFAHGDVYMLGAFAGLYATLVLKMSFVPALIF 77 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G+I+ + + + I LI + L G + Sbjct: 78 SMIVCAILGIIIERLAYRPLRNSPKIVILITAIGVSLFLEYTTMFFLGPQPRAFPEVFKH 137 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V ++ L + + T I A R + + + Sbjct: 138 AS---------YTLLGGKVTISNQEILIIAVTVILMILLQYIVHNTKIGKAMRAVSYDMQ 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG +++ P M + +LGG+ Sbjct: 189 AARLMGINVDTTISITFALGSALAAAAGVLVGIYYNKVFPLM-GIMFGLKAFVSAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + IL L G + + F + L +++L++ Sbjct: 248 GIIPGAMAGGFILGITESLVSGYGSSLYRDPVAF-------------VILIIILLVKPSG 294 Query: 339 LLR 341 L Sbjct: 295 LFG 297 >gi|229588875|ref|YP_002870994.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] gi|312959466|ref|ZP_07773983.1| permease of ABC branched chain amino acid transporter [Pseudomonas fluorescens WH6] gi|229360741|emb|CAY47599.1| high-affinity branched-chain amino acid ABC transport system, permease [Pseudomonas fluorescens SBW25] gi|311286183|gb|EFQ64747.1| permease of ABC branched chain amino acid transporter [Pseudomonas fluorescens WH6] Length = 307 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 87/290 (30%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSLPL 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + + I I + + Sbjct: 71 LMTAAFLASIVVTSAYGYSIERVAYRPLRGSNRLIPLISAIGMSIFLQNTVLLSQDSKDK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + F + V+ V + + L++ R+ + A R ++ Sbjct: 131 SIPNLIPGSFSFGPGGAEEVLISYMQILVFVVTLVAMLGLTLFISRSRLGRACRACAEDI 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A + I+P+ F + + +LGG Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ +L + + ++ F + I Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|167567695|ref|ZP_02360611.1| inner-membrane translocator [Burkholderia oklahomensis EO147] gi|167574779|ref|ZP_02367653.1| inner-membrane translocator [Burkholderia oklahomensis C6786] Length = 314 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 17/305 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+++ G +G++++ IGAY+ + L PV Sbjct: 27 LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTVYMFSWFAQNVWHALTPVYFFF 86 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + L + +L W + + Sbjct: 87 AILAAFALAFAAGWLAEWAL--IRHLYKRPLDTLLATWGLSLGMQQVFRSTFGPKEVSPA 144 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + + +V+ ++ ++L L R+ R N+ + Sbjct: 145 LPDWLMGSWEPTPGLDIPVSGMFVMGLALLMTGGLLLALYRSRWGLRVRATVANRPMANA 204 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AGA F A + + +V GG SL Sbjct: 205 AGINTRRTDRMTFAIGCGIAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 262 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + L ++ + +++++R L Sbjct: 263 GTVASAFGIAQMQSISEFFLS-------------GSIARVLTLLTVVVILMLRPQGLFAS 309 Query: 343 RTPSN 347 + Sbjct: 310 KVRRV 314 >gi|73541095|ref|YP_295615.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72118508|gb|AAZ60771.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 439 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 48/338 (14%), Positives = 117/338 (34%), Gaps = 32/338 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + +L+ L L + + ++ Q+ I ++FA ++++G G+LS Sbjct: 23 KPLNLARWVIWSLTILVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFG 82 Query: 70 CVIAYAIGAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 + +GA+ ++ + L + +L V + G++ G + K G A+ Sbjct: 83 HAVYSGLGAFIAVHVLNMLGAGKVWLPVSMLPLVGGLAGAFFGVLFGYVTTKKSGTTFAM 142 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 T+ + E+ + + G+ GI + + F +Y Sbjct: 143 ITMGIGEMVFASSLMFPEFFGGEGGIS------------TNRVVGDPFLGITFGPGRQVY 190 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++ C +S + +T + +RDN + + + +S+ F G+ Sbjct: 191 YLIAAWCLVSMVAMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRYLVLILSAFFAGI 250 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 +GA A + + +S + + V+ +GG + + + Sbjct: 251 SGALSAINFEIVSAENVSAVRSGGVLLAAFIGGAGVFFGPIIGAVVFMLFAVALSDLTKA 310 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + L+++ + L Sbjct: 311 W---------------LLYLGLFFVLMVMFVPGGIASL 333 >gi|300717445|ref|YP_003742248.1| High-affinity branched-chain amino acid ABC transporter permease [Erwinia billingiae Eb661] gi|299063281|emb|CAX60401.1| High-affinity branched-chain amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 304 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 88/304 (28%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P+ Sbjct: 9 LINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLALLASFGIHSFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ + + I + Sbjct: 69 LIFGTLVFTIVVTGVYGWAIERVAYRPLRNSTRLAPLISAIGMSLILQNYVQLSQGPNQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + + F V ++L+ A + ++ T + R + +++ Sbjct: 129 GIPTMLTGVLRFDVGDGIVQITWTKVFILIAAFLGMAILTWIIQYTRLGRICRATQQDRR 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A G+AG + F I + +LGG+ Sbjct: 189 MASILGINTDRVISLVFVIGAAMAGLAGVLVTMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L GM + + F L ++++ R Sbjct: 248 GSLPGAMLGGLLLGIAEAQFAGMVNSDYKDVFSFG-------------LLVVILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|92118124|ref|YP_577853.1| inner-membrane translocator [Nitrobacter hamburgensis X14] gi|91801018|gb|ABE63393.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Nitrobacter hamburgensis X14] Length = 304 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 102/312 (32%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90 + + + IY + A G ++V G +G+++ + IG ++ +I S L Sbjct: 8 LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFTALITFLILVSIGLSAVPL 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ VS I+ G + + + +A L+ + +L + +T G Sbjct: 68 ILLIMLVVSMAITAVYGWAVERIAYRPLRQSFRLAPLLSAIGMSFVLSNFSQVTQGAQVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + T S + + ++ + +L ++ A RT Sbjct: 128 PIPPLITGGYTLHDSGNFAVQLSNVKIVVVVTTVVLLAIFSYIVA-------RTRFGRDM 180 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +Q L + F + +A +AG + + M F I Sbjct: 181 RACEQDQTMAALLGVDVDRTISMTFVMGAALAAVAGMMYLLYYGLVDFFM-GFVAGIKAF 239 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL + + + + F L + Sbjct: 240 TAAVLGGIGSLPGAMLGGLAIGLIETFWSAYFSIQYKDVAAFS-------------ILIV 286 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 287 VLIFMPTGLLGR 298 >gi|71733898|ref|YP_274918.1| ribose ABC transporter ATP-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554451|gb|AAZ33662.1| ribose ABC transporter, ATP-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 627 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 97/336 (28%), Gaps = 38/336 (11%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 LRL+ L L+ ++ L++ + + + Q I + A G++ V+ Sbjct: 320 LRLSVDRFGLPLVFILLCLVMAFASEYFMTWRNWMDILRQTSINGILAVGMTYVI-LTKG 378 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + L+ A ++ ++ + + G++ G Sbjct: 379 IDLSVGSILAFAGLCSALVATQGYG-LLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVAT 437 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 ++S G+ T + I + + Sbjct: 438 LGMLSI---------------ARGMTFILNDGSPVTDLPEEYLALGIGRVGPIGVPIIIF 482 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++ + F R T + N+K+ + + S + VS G+A Sbjct: 483 AVVALIFWMVL-----RYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLA 537 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCC 299 G +A S + I+ V++ GG S+ ++ + Sbjct: 538 GVVLSARTTSA-LPQAGMSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGL- 595 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 +LL + L+++ L+ + R Sbjct: 596 --------NLLGVSSYYQQVAKGLIIVFAVLIDVWR 623 >gi|78044461|ref|YP_361044.1| high affinity branched-chain amino acid ABC transporter permease [Carboxydothermus hydrogenoformans Z-2901] gi|77996576|gb|ABB15475.1| high affinity branched-chain amino acid ABC transporter, permease protein [Carboxydothermus hydrogenoformans Z-2901] Length = 294 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GA+ + + +S + V Sbjct: 8 LINGISVGSIYALIALGYTMVYGIIKLINFAHGDVYMLGAFVGLYATAVLKMSFVPALIV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+I+ + + + I LI + +L G + Sbjct: 68 SMIACAILGIIIERLAYRPLRNSPKIVILITAIGVSLLLEYTTMFFLGPQPRAFPEVF-- 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V +++ L + + T I A R + + + Sbjct: 126 -------KQVSYPLLGGKVTISNREILIIVVTIILMLLLQYIVHNTKIGKAMRAVSYDMQ 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG +++ P M + +LGG+ Sbjct: 179 AARLMGINVDTTISITFAIGSALAAAAGVLVGVYYNKVFPLM-GIMFGLKAFVSAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + IL L G + + F + L +++L++ Sbjct: 238 GIIPGAMTGGLILGITESLVSGYGSSLYRDPVAF-------------VILIIILLVKPSG 284 Query: 339 LLR 341 + Sbjct: 285 IFG 287 >gi|62317991|ref|YP_223844.1| branched-chain amino acid ABC transporter ATP-binding/permease [Brucella abortus bv. 1 str. 9-941] gi|83269968|ref|YP_419259.1| tetracycline resistance protein TetB [Brucella melitensis biovar Abortus 2308] gi|189023243|ref|YP_001932984.1| branched-chain amino acid ABC transporter, ATP-binding/permease protein [Brucella abortus S19] gi|260544176|ref|ZP_05819997.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC 8038] gi|62198184|gb|AAX76483.1| branched-chain amino acid ABC transporter, ATP-binding/permease protein [Brucella abortus bv. 1 str. 9-941] gi|82940242|emb|CAJ13300.1| Tetracycline resistance protein TetB:ATP/GTP-binding site motif A (P-loop):Bacterial inner-membrane translocator:ABC transpor [Brucella melitensis biovar Abortus 2308] gi|189021817|gb|ACD74538.1| branched-chain amino acid ABC transporter, ATP-binding/permease protein [Brucella abortus S19] gi|260097447|gb|EEW81321.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC 8038] Length = 570 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFANDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|326330320|ref|ZP_08196630.1| urea ABC transporter, permease protein UrtC [Nocardioidaceae bacterium Broad-1] gi|325951857|gb|EGD43887.1| urea ABC transporter, permease protein UrtC [Nocardioidaceae bacterium Broad-1] Length = 362 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 102/321 (31%), Gaps = 28/321 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + + Y + A G+ + G G+L L + + IGAY+ + + Sbjct: 26 SDFRLGLLAKYCCYAIAAVGIGLAWGRGGMLVLGQGLYFGIGAYAMAMHLKLADAGPGGV 85 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM--------------SEIFQNILIKWK 141 A+ A P + I L + ++ Sbjct: 86 PDFMALYGDATVPGWWEPLRSGALALVVILVLPALVAGLLGLAVFKRRIKGAYFAILSQA 145 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + + + + FF + + +Y++ G+ +S + WL Sbjct: 146 LAAAFAILLVGQVKTTGGANGLNNFQGFFGYALFDPANKRMLYFIAAGILLVSILAMAWL 205 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 RT +RD ++ L T KL+A+ +++ + GA F +SPD Sbjct: 206 YRTRFGELLVAVRDGEERVRFLGTDPANVKLAAYVIAAVLASIGGALFVPIAGIVSPDDV 265 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 +I +++ V LGG SL A ++ +F + Sbjct: 266 GVVASIGLLAGVALGGRASLLGPAVGALLVGYAETSLSE--------------AFPGSWS 311 Query: 322 TLMVIALFLVILMRSHSLLRL 342 LVIL+ L +L Sbjct: 312 YFQGALFVLVILLLPGGLAQL 332 >gi|91778399|ref|YP_553607.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|296159888|ref|ZP_06842709.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. Ch1-1] gi|91691059|gb|ABE34257.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] gi|295889871|gb|EFG69668.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. Ch1-1] Length = 387 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 97/357 (27%), Gaps = 36/357 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L ++ ++V +L L + + ++ + L Y A GL + G G+LS Sbjct: 27 LRRWLTTDGYGSIVVLAVLILVVFPLALDVFRLNLMGKYLTYAFVAVGLVMAWGYGGVLS 86 Query: 68 LNCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115 L + + +G Y + + Sbjct: 87 LGQGVFFGLGGYCMAMFLKLEASDPVSTKIQSTPGIPDFMDWNQLTALPFWWKPFHSLPF 146 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRS 165 + L F + + I + Sbjct: 147 ALAAVVVVPCALAFVVGFAMFKRRVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITD 206 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 L + ++ +Y+V + ++ ++R+ + +RD + Sbjct: 207 LRTLLGWDIRGDGAKLILYFVNAVLLLVAILCCRQIQRSKLGTLLLAMRDKEDRVRFSGY 266 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + K+ AF V++ + GA F +SP +I ++ +GG SL Sbjct: 267 DVAMFKVFAFCVAAVLAAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMSLVGAV 326 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ F SF LM V++ + L L Sbjct: 327 YGAVLVNLGKTW--------------FSESFPNLWLFLMAALFIGVVMAFPNGLAGL 369 >gi|258544253|ref|ZP_05704487.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] gi|258520491|gb|EEV89350.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] Length = 304 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 92/304 (30%), Gaps = 15/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-GSRYGLSIWLLIP 97 I + IY + A G ++V G +GL++ Y IGAY V+ + L + Sbjct: 8 IINGLTLGSIYALIAIGYTMVYGIIGLINFAHGEIYMIGAYVGVVSLVGLPAFGLPLTLV 67 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + I A + G + Y + + + + N A + Sbjct: 68 IILAILIAVVLTGGYGFAVEKIAYKPLRNSPRLVPLISAIGMSIFLQNFVALGQSNKDIA 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 V + + ++ L+++++ A R + Sbjct: 128 LQPVLTARWELLANDHGMSVSLSALQIIIFVVTLAAMLALNLFIKKSKTGMACRACASDI 187 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 L F + +A +AG A I+P M F + + +LGG Sbjct: 188 GMAKLLGIDADKIIALTFVIGAALAAIAGILVALYYGTITPYM-GFVAGMKAFTAAVLGG 246 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL + L+ F L +V+L+R Sbjct: 247 IGSIPGAMLGGFILGLSESFASAYLASEYKDLVAFS-------------LLIVVLLIRPS 293 Query: 338 SLLR 341 +L Sbjct: 294 GILG 297 >gi|157363663|ref|YP_001470430.1| inner-membrane translocator [Thermotoga lettingae TMO] gi|157314267|gb|ABV33366.1| inner-membrane translocator [Thermotoga lettingae TMO] Length = 302 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 87/303 (28%), Gaps = 17/303 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + G Y S + + W+ Sbjct: 10 LVNALSLGGIYALIAIGYTMVYGILRLINFAHGDVFTYGIYFAFYGVSIFLMPWWISFMF 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G + + + + I+ LI + L + + G + Sbjct: 70 SIFLTAFLGAFIEKVAYRPLRNAPRISALITAIGVSFFLENFAIVAFGGRAKSFNPQTGI 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V I L +I + RT I A R I + Sbjct: 130 YPNSF-----LRMLQIGKVRLPILTLITLGITAISLFILIWIVYRTKIGMAMRAISKDIP 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + S + G +A +I + ++GG+ Sbjct: 185 TTRLMGVNADRVISFTFMIGSGLAAIGGILWAMKYPQI-YPFTGMIPGLKAFIAAVVGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL + + F S L V+L++ Sbjct: 244 GSIQGAMIGGFILGISEIMI-----------VAFIPSLAGYRDAFAYAILLFVLLVKPTG 292 Query: 339 LLR 341 +L Sbjct: 293 ILG 295 >gi|327189516|gb|EGE56671.1| putative branched-chain amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 329 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 122/310 (39%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +GL L I + Sbjct: 42 FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKEWGLPPELGILIGVA 101 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G++MG +++ +G Y A+ TL +S++F ++ K Sbjct: 102 GAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAKFTEG--------------ED 147 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MYY +L + + II + ++IR+N++ Sbjct: 148 GIQSVPRGHLFGFIDLNNSTNMYYFVLAVFLVGILIIWRFINSPFGMILKSIRENEQRAI 207 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AGA + + + + VI + +LGG+ +L Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ + F T + I + +L+ ++ Sbjct: 268 IGPLFGAGLVVALENYLATSEFPV---------------TIITGIVFMVCVLIFRRGIIG 312 Query: 342 LRTPSNFLER 351 S + Sbjct: 313 EFYASRLGRK 322 >gi|260428504|ref|ZP_05782483.1| branched-chain amino acid ABC transporter, permease protein [Citreicella sp. SE45] gi|260422996|gb|EEX16247.1| branched-chain amino acid ABC transporter, permease protein [Citreicella sp. SE45] Length = 295 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 92/306 (30%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIP 97 + + + ++ + A GL+++ G + +++ +G Y +L + + +L Sbjct: 8 VANGLMLGGLFAIVAVGLTLIFGIVKVINFAHGEFLMVGMYLSFLLSTGLDVHPYLTAAA 67 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 V+ + + L + + L+ + G Sbjct: 68 VAPALFVLGALTQRLLIQPLMSARDEHVQIFATVGLSTALMNLALLIFGADIANTPAHGV 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + +VL L + L++++T A R N+ Sbjct: 128 RSQVMLGEVRILTG-----------QLWVLAAAVALVIGLQLFMKKTRTGRAIRATAQNR 176 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A + F + F + +A +G+ + A F I V+LGG Sbjct: 177 AAARLMGINDKFIYILTFGIGAACVGLGSSLIAPLYPTSPTIGTYFVL--IAFVCVVLGG 234 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ ++ V L + ++ L+++++ Sbjct: 235 LGSIPGAFFGALVIGLVDALSGFYIG-------------SDLREAVVFTIFLLILILKPS 281 Query: 338 SLLRLR 343 L R Sbjct: 282 GLFGTR 287 >gi|50123260|ref|YP_052427.1| branched-chain amino acid transporter permease subunit LivH [Pectobacterium atrosepticum SCRI1043] gi|49613786|emb|CAG77237.1| high-affinity branched-chain amino acid transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 308 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 ++ +++ + I I + R Sbjct: 72 LISVAFVAAVVISSAYGWSIERVAYRPVRTSKRLIALISAIGMSIFLQNYVSLNQGSRDV 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWVLGESNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L + F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLVLGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|27380782|ref|NP_772311.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27353947|dbj|BAC50936.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 305 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 96/312 (30%), Gaps = 28/312 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP- 97 + + + IY + A G ++V G +G+++ + IG + +I IP Sbjct: 8 LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDVFMIGGFIALITFLILISLGLTAIPV 67 Query: 98 -------VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 V+ I+ G + + + +A ++ + +L + + G Sbjct: 68 ILLVVLLVAMAITALYGWTIERIAYRPLRHSFRLAPMLSAIGMSFVLTNYSQVAQGARVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + T S F S+ I + VLL A + T + Sbjct: 128 PIPPFITGGYTLHESADGFVIQLSNIQIMVVITTIVLL------AIFTWLVSHTRLGRDM 181 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +Q L + F + +A +AG + + M F I Sbjct: 182 RACEQDQTMAALLGVDVDRTISMTFVIGAALAAVAGFMYLLYYGLVDFFM-GFVAGIKAF 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL + + + + F L + Sbjct: 241 TAAVLGGIGSLPGAMLGGLAIGLIETFWSAYFSVEYKDVAAFS-------------ILIV 287 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 288 VLIFMPTGLLGR 299 >gi|86749392|ref|YP_485888.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86572420|gb|ABD06977.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 332 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 107/301 (35%), Gaps = 26/301 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + +++ L +V G G+ +L + +GAY+ L++ V Sbjct: 41 LAFLTRVIGLAFLVISLDLVTGYCGVATLGHAALFGVGAYAAGNACLAGVTDPILMLLVG 100 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + A G+I G+ +FRG + ++ ++ + K IT G G+ Sbjct: 101 IVAGTATGLISGVLVTRFRGLPQLVLSIAFGQLVAALANKLSSITGGSDGLAGISPGPVF 160 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 G +F ++ Y + + ++ ++L R+ + R I+D+ Sbjct: 161 GM------------FNFDMFGRTGYVFSVAVLLIAMVVLLRFARSPFALMCRAIKDDTLR 208 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + + + V+ A G+ GA A + + D F + + ++ILGG Sbjct: 209 ARMIGVAVYPRLVVMYCVAGAVAGLGGALTAINTGVVGLDSVGFERSAEALIMLILGGAG 268 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 +L + + +++ L+ + L +V+L L Sbjct: 269 NLWGALIGAILFELFHHYVSAASPFHW--------------MILIGLLLIVVVLFFPKGL 314 Query: 340 L 340 + Sbjct: 315 V 315 >gi|117928116|ref|YP_872667.1| inner-membrane translocator [Acidothermus cellulolyticus 11B] gi|117648579|gb|ABK52681.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidothermus cellulolyticus 11B] Length = 338 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 112/326 (34%), Gaps = 34/326 (10%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 +L L + S +I ++ + ++Y A +++ G G SL + IGAY Sbjct: 11 IFAVLVLAMPLMTSAHWILNIAVFTVMYAGLALAWNLIGGFAGYPSLGHAAFFGIGAYVE 70 Query: 82 VILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 I + + + ++P+ + + + +L+ R D AI T+ + + Q + Sbjct: 71 AIWFNHHSVGAGYLPFFVLPIVGLAVAFAMLPVAWVALRTRADVFAIVTITLLFVVQTLA 130 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +T G GI + YE Y+ + + L+ + Sbjct: 131 FNLHSVTEGSQGIGIHPPP-----------------FDPATYERPFYWAMAAIFLLAMIV 173 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 ++ + A IR ++ + + AKL AF +S+A M GA +A I Sbjct: 174 TWLVQNSKTGLALLAIRGDEDRASGIGVHVTLAKLVAFFLSTALTAMIGAVWAYYVTFIY 233 Query: 258 PD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P I ++ + LGG +L IL + + Sbjct: 234 PQFAVDPLVTIGMVLMTFLGGRATLWGPVVGALILAPAQQYL------------AYQFGS 281 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 + + +V++ ++ Sbjct: 282 SRLYLLAYAAVFLIVMVFLPRGIVPT 307 >gi|221202198|ref|ZP_03575233.1| inner-membrane translocator [Burkholderia multivorans CGD2M] gi|221208741|ref|ZP_03581740.1| inner-membrane translocator [Burkholderia multivorans CGD2] gi|221171373|gb|EEE03821.1| inner-membrane translocator [Burkholderia multivorans CGD2] gi|221177992|gb|EEE10404.1| inner-membrane translocator [Burkholderia multivorans CGD2M] Length = 324 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 133/324 (41%), Gaps = 16/324 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+Y +LL L A Y + ++L + +FA ++++G GLLS + A Y Sbjct: 5 VLYGVLLAALLVAPFIGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 63 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + G + L + I+ G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 64 ATGYSMQTLGFTPELGVLAGTAIATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 123 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ + R F + ++ +YYV+L + + + I+ Sbjct: 124 A--------------PFTHGEDGLQGVPRGRLFGLLDLSNDLALYYVVLVVIVAACAFIV 169 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + I++N+ SL KL AF +S+ G+AG+ + Sbjct: 170 RIVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 229 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318 ++ + +V+ + ++GGM +L A+++ + + + + + + + + S Sbjct: 230 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 289 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 290 SATIVTGLIFIACVLAFRRGIVGE 313 >gi|148549922|ref|YP_001270024.1| inner-membrane translocator [Pseudomonas putida F1] gi|148513980|gb|ABQ80840.1| inner-membrane translocator [Pseudomonas putida F1] Length = 484 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 211 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRFAPGAIEFYPLIALPVAFAVSAGVGMA 270 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W I + + + + + + Sbjct: 271 LER--TVIRHLYGRPLETLLATWGISLILIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 328 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + L L RT + R + N+ + + AF + Sbjct: 329 VLPHNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 388 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L +L Sbjct: 389 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 446 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 447 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 481 >gi|292656917|ref|YP_003536814.1| putative branched-chain amino acids ABC transporter permease [Haloferax volcanii DS2] gi|291372970|gb|ADE05197.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] Length = 445 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 130/400 (32%), Gaps = 64/400 (16%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ---ILIYVMFAWGLSIVVGSLGLLSL 68 +L LL +L + + ++S+ I ++ M + L++ G GL ++ Sbjct: 18 LIVLVLLGTYLAYVLAGVVLGYTLRGQLNSIATLTFYIGVFAMLSLALNLHWGYTGLFNI 77 Query: 69 NCVIAYAIGAYSYVILGSRYGL------------SIWLLIPVSAMISGACGMIMGLPSLK 116 V A+G Y I+ + +W+ I + G+++ LP+L+ Sbjct: 78 GIVGFMAVGVYVTAIVTKPTYVAGGAAQVGGLGLPLWVGILAGMTAAALLGLVVALPALR 137 Query: 117 FRGDYLAIATLIMSEIFQNILI-----------KWKPITNGKAGIYVADRLYFLGTTVRS 165 R DYLAI T+ MSEI + + G I Sbjct: 138 LRADYLAIVTIAMSEIVRFSFLSGELQQFQLFGNRVGFGGGSGLILDFSPPLEALLRGVG 197 Query: 166 LIRFFRFPSS-----------FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 L + V+ + +LLG ++ + + IR Sbjct: 198 LWNGYLGFVDAFQVLVPRNPKPVVDGLVYGLLLLGFVAGFYWLLKRTGESPFGRVLKAIR 257 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 +++ +L K+ +F + A +G+AG + + ++P+ F+ + +I Sbjct: 258 EDEDVANALGKNTDRFKIKSFMLGCALMGLAGILWLVPQGAVTPNFFRPRVTFFIWIALI 317 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN----------------- 317 +GG S + A+ V+ +++ S + Sbjct: 318 IGGAGSNTGSVLGGAVFAAVLYQGPRYFQNLVSAVFPNFDSPSGFGQAISPLISQFDPVP 377 Query: 318 ----------MRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 +M + L ++ R +L R + Sbjct: 378 FLLYTVDSIRQLQLVVMGLVLIWLMHNRPEGMLGYRKETA 417 >gi|254731670|ref|ZP_05190248.1| branched-chain amino acid ABC transporter, ATP-binding/permease protein [Brucella abortus bv. 4 str. 292] gi|260759428|ref|ZP_05871776.1| predicted protein [Brucella abortus bv. 4 str. 292] gi|260669746|gb|EEX56686.1| predicted protein [Brucella abortus bv. 4 str. 292] Length = 570 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|116695973|ref|YP_841549.1| ABC transporter permease [Ralstonia eutropha H16] gi|113530472|emb|CAJ96819.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 287 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 88/307 (28%), Gaps = 27/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A GL++V G L + + Y GAY L + G++ WL + Sbjct: 8 FLNGLTLGGVYSLVALGLTLVYGILHVPNFAHGAFYMAGAYVSYFLMTSLGVNYWLAMLG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A++ M + + +I + L G + Sbjct: 68 AALVVAVLSMAADRLVFHPLRNSPELHDMIAAIGILLFLEAGAQALWGADFHRMPTP--- 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ L + L+L RT + N++ Sbjct: 125 ---------YGQIVDVFGLTAPLQRLLIIGAAFALMVLLHLFLTRTMTGATIMAMAQNRE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + L FA+S A +A +A + I+ILGGM Sbjct: 176 GAALVGIDATRVTLLVFAISGALAAIAATLYAP--INLVYPSMGNLVITKAFVIIILGGM 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + L +++ +R Sbjct: 234 GSIPGAIVGGLIIGMAESFGGFYVS-------------TDYKDIIAFVLLVVILSIRPQG 280 Query: 339 LLRLRTP 345 L +T Sbjct: 281 LFAGKTA 287 >gi|148256164|ref|YP_001240749.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146408337|gb|ABQ36843.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 336 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 110/352 (31%), Gaps = 25/352 (7%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVM 51 MS F R + ++ L ++ L+F + + +Y + Sbjct: 1 MSRFIERQPIWSLVILLAIALFTWLIFAVWPPGLEDAIGRKKVFLSAVFNGITLGGLYFL 60 Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A G +++ G + ++L Y G Y + + G I + +++ ++ Sbjct: 61 VASGFTLIFGLMRNVNLAHGSLYLFGGYVGYGISAATGSWILAFVVAFVVVAAIGILLQF 120 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 L + G L + + + I L Sbjct: 121 LVFRRMEGQDLRQTMVTIGLSIVFADLMLWAFGGDFYQIQTPAWLIGPVQLPLMTAMKSS 180 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + F+ Y + + G + + L L RT + R D+++ + I Sbjct: 181 GEAVFLQYPLVRLVIFCGSVVIGVLMWLALNRTRVGMIVRAGVDDREILAATGVHIQLVF 240 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 + FA+ + G+AG + + +F + +VI+GGM S+ A I+ Sbjct: 241 VLVFALGAGLAGIAGVVGGTFQSISPGEDTRFLL--ASLVVVIVGGMGSIPGAALGALII 298 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 +L + + + LV+ +R LL R Sbjct: 299 GLAEQLGSVY--------------IPTYAIVVTFLIMVLVLALRPQGLLARR 336 >gi|260425476|ref|ZP_05779456.1| urea ABC transporter, permease protein UrtC [Citreicella sp. SE45] gi|260423416|gb|EEX16666.1| urea ABC transporter, permease protein UrtC [Citreicella sp. SE45] Length = 413 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 50/367 (13%), Positives = 101/367 (27%), Gaps = 36/367 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + + + +L +G + L ++ A + +V G G+LSL Sbjct: 15 WFLLSLGVFTLIVTVLADGIGNGMISTSFVKTLGRTLCLMLVAVAMDVVWGYTGILSLGH 74 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLL-------------------------------IPVS 99 + + +G Y + I + P+ Sbjct: 75 MAFFGLGGYMIGMWLMYARTEIIVSESLRAAAVPPTPEEIHDAVGTQIFGVVGSSDFPLI 134 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + + + L + L L + + A + Sbjct: 135 WAFASSFWAQLALVVIVPGLLALIFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDSG 194 Query: 160 GTTVRSLIRFFRFPSSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L P + I ++ + W+ + + R IRD Sbjct: 195 LRGNNGLSGLQNLPGLDSVPQSMVSIAFFWASAAALAAGYVLFAWVVSGKMGSVIRGIRD 254 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ L + KL F V++ G+AGA + I+P +I + V + Sbjct: 255 NEGRVRFLGYHVESYKLFVFTVTAVVAGLAGALYYPQAGIINPAEVAPIASIYLAVWVAI 314 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L A A + + G + + L+ ++ V L+ Sbjct: 315 GGRGRLYGAALGAAFVSLLSSWFTGGGVPNIPLGF-YTIQWTDWWLVLLGVSFVAVTLLA 373 Query: 336 SHSLLRL 342 + L Sbjct: 374 PKGIGGL 380 >gi|55376686|ref|YP_134537.1| branched-chain amino acid transport system / permease component [Haloarcula marismortui ATCC 43049] gi|55229411|gb|AAV44831.1| branched-chain amino acid transport system / permease component [Haloarcula marismortui ATCC 43049] Length = 384 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 91/274 (33%), Gaps = 16/274 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 ++ + LS+V G G+LS V+ + IGAY++ ++ + + V A I Sbjct: 57 LSLFMVLALLGLSLSVVWGYSGVLSFGQVVFFGIGAYTFGVVSINFATPGGITAAVVAGI 116 Query: 103 SGACG----MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT--------NGKAGI 150 G + + R Y+ I TL+ + + + + G G+ Sbjct: 117 VGGGVSAAILGYFMFYGGVRDVYVTIITLVSTIVMHTFMAQTAGSEWAIGEAALGGFNGM 176 Query: 151 YVADRLYFL----GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 L R YY++L + + + L + Sbjct: 177 PDIPLLTLGIEGASYQFIYNPFPMRIIGIGSFEISPFYYLVLLLLVGTYLGLRVLVNSDY 236 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 +R+++ + K F + A G++G +AA I P +F Sbjct: 237 GRVMVAVREDEDRTEMFGYNVTRIKFVVFTLGGALAGLSGVLYAARNVYIDPTVFSLLFA 296 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 + + V +GG SL AT + + G Sbjct: 297 TLPVIWVSIGGRKSLLGAVVATLAIEYLRISMAG 330 >gi|239835046|ref|ZP_04683374.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301] gi|239823109|gb|EEQ94678.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301] Length = 326 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 129/328 (39%), Gaps = 33/328 (10%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ L + +++L + +FA ++++G G+LS + Sbjct: 23 LSAVILGIALVGLLAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 78 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G++ L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 79 GGAAYITAHTVKVWGVTPELGLVLGVLAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 138 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R + F + + MYY +L + L Sbjct: 139 FFCLQASFTHG--------------EDGLQGVPRGYLFGIIDLNQPMTMYYFVLAVFVLG 184 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +I + + +++R+N+ SL ++ KL+AF +S+A G+AG A Sbjct: 185 VFVIWRIINSPFGMILKSVRENENRAISLGYSVNRYKLAAFVMSAALAGLAGGLKALVFQ 244 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 245 FATLTDVGWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNYLATSDFPV--------- 295 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 T + + +L+ ++ Sbjct: 296 ------TIVTGVIFMACVLLFRKGIIGE 317 >gi|330888012|gb|EGH20673.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 526 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 72/250 (28%), Gaps = 4/250 (1%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 270 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAVIGMA 329 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 330 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 387 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 388 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 447 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 448 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 505 Query: 298 CCGMNFYYFN 307 Sbjct: 506 LEPQIGAVLG 515 >gi|221214307|ref|ZP_03587279.1| inner-membrane translocator [Burkholderia multivorans CGD1] gi|221165962|gb|EED98436.1| inner-membrane translocator [Burkholderia multivorans CGD1] Length = 324 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 133/324 (41%), Gaps = 16/324 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+Y +LL L A Y + ++L + +FA ++++G GLLS + A Y Sbjct: 5 VLYGVLLAALLVAPFVGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 63 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + G + L + I+ G+I+GL +++ +G Y A+ TL +++ I ++ Sbjct: 64 ATGYSMQTLGFTPELGVLAGTAIATLLGLIVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 123 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ + R F + ++ +YYV+L + + + I+ Sbjct: 124 A--------------PFTHGEDGLQGVPRGRLFGLLDLSNDLALYYVVLVVIVAACAFIV 169 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + I++N+ SL KL AF +S+ G+AG+ + Sbjct: 170 RIVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 229 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318 ++ + +V+ + ++GGM +L A+++ + + + + + + + + S Sbjct: 230 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 289 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 290 SATIVTGLIFIACVLAFRRGIVGE 313 >gi|154248136|ref|YP_001419094.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154162221|gb|ABS69437.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 630 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 108/267 (40%), Gaps = 18/267 (6%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y ++G +ILI+V+FA L ++ GL S + +GAY + G Sbjct: 325 PFFLGNYALTVGAEILIFVLFAASLHFIMTVGGLASFGHAAYFGLGAYGAAFMVKFLGAP 384 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + V + ++ G ++ G Y A+ TL ++I ++ +W +T G G+ Sbjct: 385 MEAALIVGPALGLVGAVLFGWFCVRLSGVYFAMLTLAFAQIAWSVAFQWVDVTGGDNGLL 444 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +PS++ +++ L + + ++ L + R Sbjct: 445 GI------------------WPSAWAAKPQGFFWLALAVAVIGVGLLRMLVFSPFGYGLR 486 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +RD+ ++ + +AF V+ F G+AGA FA + + PD ++ + Sbjct: 487 AVRDSTLRAEAIGLDRARLQWAAFVVAGTFAGIAGALFAFLKGSVFPDFMGIPTSVDGLV 546 Query: 272 IVILGGMTSLSKIAKATAILIGVVELC 298 +V+LGG+ ++S + + Sbjct: 547 MVLLGGIETVSGAVVGAVLYKALAIWL 573 Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 95/307 (30%), Gaps = 28/307 (9%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY--GLSIWLLIP 97 S + A GLSI+ G +++ Y +GAY +L +R+ + W I Sbjct: 9 LSGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAYVLTTRFAGPIGFWGAIL 68 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 +++I A G +M + L+ + L+ + ++ + G + Sbjct: 69 AASVIVAALGALMEMVLLRRIYHAPELFQLLATFGVTLMVQDLVVVIWGPEDLLGPRAPG 128 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 G + + ++++ + ++ L +T R ++ Sbjct: 129 LAGA----------VSLFGRMVPTYDLFLMVLGPVVLGALWLLFHQTRWGVLVRAATQDR 178 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + +L + FA+ + GA + V+ ++ Sbjct: 179 EMVAALGVNQKWLFTGVFALGVFLAALGGALQIPRTTVTHTMDLSVIVEVFVVVVIGG-- 236 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ A I+ + + ++ + + +V+++R Sbjct: 237 LGSVLGAFVAAIIVAELNAFGILI--------------LPQISLIMVFLVMAVVLVVRPW 282 Query: 338 SLLRLRT 344 L Sbjct: 283 GLFGKAE 289 >gi|126668822|ref|ZP_01739768.1| ABC transporter, membrane spanning protein [Marinobacter sp. ELB17] gi|126626705|gb|EAZ97356.1| ABC transporter, membrane spanning protein [Marinobacter sp. ELB17] Length = 377 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 105/340 (30%), Gaps = 30/340 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ ++ + Y ++ + L+ M A +++ G+ G+L+L + + IG+ Sbjct: 13 ALFAVFVVLIIPWLANYSGYDLNVYARYLVLGMAAAAVALSWGTAGILNLGQALTFGIGS 72 Query: 79 YSYVILG------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 Y + ++ G + + S L + Sbjct: 73 YIMAMHLKLKASEAQAGGMPDFMGWTNMEELPWFWEPFQSVSFTLAAGILIPVAIASLIG 132 Query: 133 FQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 + + + I R + L F S +Y + Sbjct: 133 GFMFRGRITGVFVAIITLSLMLAVQLWIISEQRFTGGQNGLTGLAALELFGWSVDVYGLA 192 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 YY++ G + ++ L R+ R IR + + + ++ AFA S+ Sbjct: 193 FYYMVAGCLLVVLTLALLFLRSKAGLVLRAIRADPERTRFFGYDVSTYEVVAFATSAGIA 252 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+AG +A SP S ++ + +GG S+ + + Sbjct: 253 GIAGMLYAMILGFASPTYMGLSLSLAFVIWAAVGGRESIVAATLGGIGVNMAEGRLSDL- 311 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + T ++ + +V+L L L Sbjct: 312 -------------FFDQWTLILGVIFIVVVLFLPRGLFGL 338 >gi|300691442|ref|YP_003752437.1| branched-chain amino acid ABC transporter membrane component [Ralstonia solanacearum PSI07] gi|299078502|emb|CBJ51155.1| putative ABC-type branched-chain amino acid transporter, membrane component [Ralstonia solanacearum PSI07] Length = 440 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 108/333 (32%), Gaps = 17/333 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + L L+ + L + + ++ Q+ I ++FA ++++G G+LS Sbjct: 23 RPLNLARWLIWGTTALVMIVLPLIWPRGFAITLLSQMGIMIIFALSYNMLLGQSGMLSFG 82 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + +GA+ V L +R G + L I ++ +L Sbjct: 83 HAVYAGLGAFMAVHLLNRIGAAQALGIGGPLAVALLPVAGGLGGALFGVLFGYVTTKKAG 142 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + L + + + + D G + +YY++ Sbjct: 143 TTFSMITLGIGEMVF--ASALMFPDFFGGEGGVSTNRSIGEPLLGIGFGPARQVYYLIAA 200 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 C +S +++ +T + +RDN + + + +S+ F G+AGA Sbjct: 201 WCLISMALMYAWTQTPLGRIANAVRDNPERVEFVGYNTQRVRYLVVILSAFFAGIAGALS 260 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + + ++ + + V+ +GGM + + + + + Sbjct: 261 CINFEIVTAENVSAVRSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSSVTKAW---- 316 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L+++ + L Sbjct: 317 -----------LLYLGLFFVLMVMYAPGGIASL 338 >gi|288916431|ref|ZP_06410809.1| ABC transporter related protein [Frankia sp. EUN1f] gi|288352202|gb|EFC86401.1| ABC transporter related protein [Frankia sp. EUN1f] Length = 969 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 116/316 (36%), Gaps = 19/316 (6%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 + + + I I + L +V G G +SL + A++ L Sbjct: 333 AIAVVALLATDGTWRAAVIGTFIAAIIGLSLVVVTGYAGQVSLAQLALAGAAAFTLSGLT 392 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + + ++A+ + G+++GLP+L+ RG L I TL ++ + + + I + Sbjct: 393 QSWHVPFPFAPLLAALFAAGLGVVIGLPALRLRGLTLGIVTLALAYAMEAVWFRNTDIVD 452 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 + L+ L + S F R + L + + LR +A Sbjct: 453 AEGARVTQPSLFGLDLGIGSGKAFPRIEFG---------LLCLAVLVAVCWGVARLRMSA 503 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + +A +R N+++ + ++ K+ +FA++S G+ GA A R ++ D F Sbjct: 504 LGSAMLAVRANERSAAGIGVNVVRIKVISFALASFIAGLGGALLAYRRGVVTYDSFTAIG 563 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + +++ L G+TS+ A + + L Sbjct: 564 GLTLLATAYLAGVTSVYGGITAGITAGTGIVFI----------AFDRWVHVGDWFSVLSG 613 Query: 326 IALFLVILMRSHSLLR 341 +A+ V++ + Sbjct: 614 LAVIAVLIGHPEGVAS 629 Score = 39.5 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 77/275 (28%), Gaps = 12/275 (4%) Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G+++ + AYSY L L + +P A + G G+ L G L Sbjct: 31 SGVINFATGAVASYVAYSYAALRDGQLLVLLPGLPTYAELGGPLGLAPALVIALLIGGLL 90 Query: 123 AIATLIMSEIFQNILIKWKPITNG-----KAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 ++ +A R+ +V ++ R+ + Sbjct: 91 GAVLYLLVFRPLREAPPLARAVASLGVLVVLQSLLAIRVGTAPVSVGNIFPSERWEIGSL 150 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + Y+ + + L+ + R T R ++Q F L + + Sbjct: 151 LVLSDRLYLAVTVVALALVLAAGFRFTRFGLLTRAAAESQTGAFVSGVKPDQLALYNWMI 210 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G AG A + ++ ++GG L A + + Sbjct: 211 SGVVAGAAGILIAPLSPLA--PSTYTLFVVPALAAAVVGGFQHLLPTVAAGLAVGMLQSE 268 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 + + +++ + ++ Sbjct: 269 ATSLA-----GDHSWLPRTGSSELVPLIVIMVALL 298 >gi|300691048|ref|YP_003752043.1| high-affinity branched-chain amino acid transport system permease (livM or livH) [Ralstonia solanacearum PSI07] gi|299078108|emb|CBJ50751.1| putative high-affinity branched-chain amino acid transport system permease (livM or livH) [Ralstonia solanacearum PSI07] Length = 398 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 93/344 (27%), Gaps = 32/344 (9%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 +L + V L+ Y ++ +I+ Y + A L +V G G+LSL + Sbjct: 32 SLLVCIGVPVCALVVPEGHPLHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGL 91 Query: 73 AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 +A+G Y+ + +++ L Sbjct: 92 FFALGGYAMGMYLMRAIGREGVYQSDLPDFMVFLDWKELPWFWHGTEHFAWAALLVVLVP 151 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + A + +I + + + R FP Sbjct: 152 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 211 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + V ++ L+ + + IRD + + KL Sbjct: 212 AAVSTRTVLFVATFIALVLALIACRAIVTSKFGRVVTAIRDAEARVMFSGYNPLGYKLFV 271 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 + S+ G+AGA + I+P +I + V +GG +L ++ G Sbjct: 272 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLVGPIVGAFLVNGA 331 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + ++ LV L + Sbjct: 332 KTVLTAW--------------VPEYWLFVLGAIFVLVTLYLPNG 361 >gi|294629450|ref|ZP_06708010.1| ribose ABC transporter, permease [Streptomyces sp. e14] gi|292832783|gb|EFF91132.1| ribose ABC transporter, permease [Streptomyces sp. e14] Length = 649 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 99/314 (31%), Gaps = 29/314 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +V + L G + + ++G+Q + + A+G++ V+ S G + L+ Sbjct: 27 ALTALIVLVIALSALSGDFLTTDNLLNIGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 85 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ A + +G+ + L + ++ A G++ G + ++ Sbjct: 86 ALSATVLAWSATSHGVPVVLAVLLAVATGIAAGLVNGFLISYGKLPPFIATLAML----- 140 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 V L + + + ++ +L M + Sbjct: 141 ----------------SVGRGLSLVISQGSPIALPDSVSHLGDTLGGWLPTPVLVMVVMG 184 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L L RT I + I N++A + KL+ +A+S F AG AA Sbjct: 185 LITALILGRTYIGRSMYAIGGNEEAARLSGLRVKRQKLAIYALSGLFAAAAGIVLAARLS 244 Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308 P + I+ V++GG S IL + ++ F Sbjct: 245 SAQPQAAN-GYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSAFWQ 303 Query: 309 LLKFDCSFNMRHTT 322 + + Sbjct: 304 QVVIGVVIALAVLL 317 >gi|225573824|ref|ZP_03782579.1| hypothetical protein RUMHYD_02028 [Blautia hydrogenotrophica DSM 10507] gi|225038812|gb|EEG49058.1| hypothetical protein RUMHYD_02028 [Blautia hydrogenotrophica DSM 10507] Length = 198 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 68/168 (40%), Gaps = 15/168 (8%) Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + +Y+ L + L +I L ++ + A IR++ A ++ + K+ Sbjct: 18 FGIKFGRVQFFYLALAITLLVMLVIYRLVKSRVGRALIAIREDDLAAMAIGVNVRNYKIL 77 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF + + G+ G+ +A ISPD + F ++ + +VILGGM + +L Sbjct: 78 AFGIGTFCAGLMGSVYAHYITFISPDQYTFQISVNIFCMVILGGMGTTIGPVLGAIVLTL 137 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + E+ + Y ++ + + L ++ R ++ Sbjct: 138 LPEVMRTFDVY---------------RMIIVGLLMVLCMIFRPQGIIG 170 >gi|108804853|ref|YP_644790.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941] gi|108766096|gb|ABG04978.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941] Length = 321 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 107/324 (33%), Gaps = 43/324 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL---- 94 + I + A G ++V G + L++ + IG++ + + S I L Sbjct: 14 LLIGITNGSIIALIALGYTLVYGIIELINFAHGDNFMIGSFVGLTVLSGTFFGIGLFAPI 73 Query: 95 ---------------LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + + G G+ + + K + +A LI + IL Sbjct: 74 TDESGLLLKALGVGMAMLAAMAVCGLLGVGIERVAYKPLRNSPRLAVLITAIGMSFILQN 133 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + G A + D + S +++ +V+ L ++ Sbjct: 134 VGLLWKGPAQVPFPDLISGANL----------LDSGEIVFRYKDLFVIAVTVPLLLALSY 183 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 +++ T A R + +++A + + F + G +G + + I+ Sbjct: 184 FVQNTKQGKAMRAVAQDKEAAAMVGIDVDRTISVTFLLGGMLAGASGVMYGL-FNGITVF 242 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F++ + + +LGG+ +L+ ++ + + + Sbjct: 243 NVGFTQGLFAFTAAVLGGIGNLTGAVVGGILIGVIAAMSDQYIGVRWTE----------- 291 Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343 ++ L LVI+ R LL R Sbjct: 292 --IMIFAVLILVIVFRPRGLLGDR 313 >gi|13470930|ref|NP_102499.1| ABC transporter permease [Mesorhizobium loti MAFF303099] gi|14021673|dbj|BAB48285.1| probable permease of ABC transporter [Mesorhizobium loti MAFF303099] Length = 317 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 99/319 (31%), Gaps = 18/319 (5%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 L + + I + ++ A GL+I G +G++++ +GAY+ ++ Sbjct: 16 LAFWDAGQNIWYGISLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQQVIR 75 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 S L S +I+ ++ + + + +L W + Sbjct: 76 TSFPGLFDWSLVIALPLAFLVAALVGLAIER--GVIRFLYGRPLETLLATWGVSLILQQA 133 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + S F + ++L+ + ++ ++RT Sbjct: 134 VRSIFGPTNQEVGNPSW-MSGSFDIGQLAITWNRLWILVFALTVFGVLLYVMKRTPWGLQ 192 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + N++ S+ + FA+ S G+AG A S+ I Sbjct: 193 MRAVTANRRMAASMGIRTPWVDALTFALGSGIAGIAGV--ALSQIDNVSPNLGRGYIIDS 250 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +V+ GG+ +L L V + ++++ + Sbjct: 251 FMVVVFGGVGNLWGTLVGAFSLGIVNKFLEPYAGAVLGK-------------IVVLVLII 297 Query: 330 LVILMRSHSLLRLRTPSNF 348 L I R L L+ + Sbjct: 298 LFIQKRPRGLFALKGRAVE 316 >gi|150376328|ref|YP_001312924.1| inner-membrane translocator [Sinorhizobium medicae WSM419] gi|150030875|gb|ABR62991.1| inner-membrane translocator [Sinorhizobium medicae WSM419] Length = 388 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 105/356 (29%), Gaps = 35/356 (9%) Query: 13 KILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 IL LLAV+ P L L Y+ S+ + L Y + A L +V G G+LSL Sbjct: 19 AILLLLAVIVPALNLLTAPDHPLHVPTYMVSLFGKYLTYALLALALDLVWGFCGILSLGH 78 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +A+G Y+ + R + LP + D A L++ Sbjct: 79 AAFFALGGYAMGMYLMRQIGARGSYGNPLLPDFMVFLNWKELPWFWYGFDMFWFAALMVI 138 Query: 131 EIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFR 171 + + + + D + + Sbjct: 139 LVPGLVAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILG 198 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F ++ S + + + +RD + L + K Sbjct: 199 FNIQADGTRAALFAASALALAGSLVVTSGIVGSKFGKVLVALRDAESRTRFLGYRVEHMK 258 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L AF VS+ G+AGA + I+P F + +I V+ +GG +L ++ Sbjct: 259 LFAFTVSAMMAGIAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAILV 318 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 G + F +F + LV L ++ Sbjct: 319 NGGKSI--------------FTAAFPEFWLFALGGLFVLVTLFLPKGVVGTAQHHL 360 >gi|332528969|ref|ZP_08404936.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332041630|gb|EGI77989.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 372 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 102/359 (28%), Gaps = 38/359 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQ-------KYIDSMGIQILIYVMFAWGLSIVV 60 LN+ L A++ L+L L Y ++ +I+ Y + A + ++ Sbjct: 15 LNRRGWTAFLAALIAVLVLAPVLNLLVPDGHVFHMSNYTVALLGRIMCYAICALAMDLIW 74 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGA 105 G G+LSL + +A+G Y + W P S + Sbjct: 75 GYTGILSLGHGLFFALGGYMMGMYLMRQIGRDGQYKSDMPDFMVFLNWKEFPWHWAFSDS 134 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 + L L + + A + + R Sbjct: 135 FVATLILIVLVPGLIAFVFGYFAFRSRIKGVYFSIITQALTFAAMLLFFRNETGFGGNNG 194 Query: 166 LIRFFRFPSSFVIYEIFMYYVLL--GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 F R + + M +L + WL + IRD + Sbjct: 195 FTDFKRILGIPIGQGMRMMLFMLTGFTLLGFFLLGRWLMNAKFGRVLQAIRDAESRVMFS 254 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 + KL+ + +S+ G+AGA + I+P + +I + +GG +L Sbjct: 255 GYNPLGYKLTIWTLSAVMCGIAGALYVPQVGIINPGEMSPANSIEIAIWAAVGGRATLIG 314 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ G +F + LV L ++ L Sbjct: 315 PIVGAFVVNGAKSWLTA--------------AFPAFWLYFLGGLFILVTLFLPDGIVGL 359 >gi|153855724|ref|ZP_01996738.1| hypothetical protein DORLON_02756 [Dorea longicatena DSM 13814] gi|149751947|gb|EDM61878.1| hypothetical protein DORLON_02756 [Dorea longicatena DSM 13814] Length = 550 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 34/328 (10%), Positives = 88/328 (26%), Gaps = 9/328 (2%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ F + Y I+ + + + F+ + I ++ Q + A G++ ++ Sbjct: 217 MTQFLYKNGLYIVIIMIFIALCIITPFVKNTQLFTTTNILNILQQASPRMFLALGVAGLI 276 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G L+ +G + I+ + + V A L Sbjct: 277 LLTG-TDLSVGRMVGMGMVTATIIMHNGINTGTVFGHVFDFSGMAPASRAILALCVCILF 335 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 A + + + + + + + + V P+ F+ Sbjct: 336 TTVFAMTAGFFMARFKMHPFISTM--ANMLIIFGLVTYATKGVSFGAIDPTIPNIFIPQA 393 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 ++L A + +T + N +A ++ + AF ++ Sbjct: 394 GRFPMIILWAVVAIAVVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFKVTMGAFILAGI 453 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGV 294 G + ++ I+ ++ GG+ +S + I + Sbjct: 454 LYGFGSWLECVRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVLIFTSL 513 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + T Sbjct: 514 TYSLTVLGIDTNLQFIFEGIIILAAVTL 541 >gi|194289572|ref|YP_002005479.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis LMG 19424] gi|193223407|emb|CAQ69412.1| putative ABC-type branched-chain amino acid transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 437 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 117/337 (34%), Gaps = 32/337 (9%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + + +L+ L L + + ++ Q+ I ++FA ++++G G+LS Sbjct: 21 RPLNLARWIIWSLTVLVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFG 80 Query: 70 CVIAYAIGAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 + +GA+ ++ + L + +L V + G+I G + K G A+ Sbjct: 81 HAVYSGLGAFIAVHVLNMVGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKAGTTFAM 140 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 T+ + E+ + + G+ GI + + F +Y Sbjct: 141 ITMGIGEMVFASSLMFPEFFGGEGGIS------------TNRVVGDPFLGITFGPGRQVY 188 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 Y++ C LS + +T + +RDN + + + +S+ F G+ Sbjct: 189 YLIAAWCLLSMVAMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRYLVLILSAFFAGI 248 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 +GA A + + +S + + V+ V +GG + + + Sbjct: 249 SGALAAINFEIVSAENVSAVRSGGVLLAVFIGGAGVFFGPIIGAVVFVLFAVALSDLTKA 308 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + + L+++ L Sbjct: 309 W---------------LLYLGLFFVLMVMFVPGGLAS 330 >gi|327480109|gb|AEA83419.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 396 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 97/349 (27%), Gaps = 36/349 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + L L + + +M + L Y A GL + G G+LSL I + Sbjct: 14 GAIGFLILAALLLVVFPLALDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGIFFG 73 Query: 76 IGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 +G Y + W + + I Sbjct: 74 LGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQLTELPLFWEPFHSIGFTLVAVVAV 133 Query: 120 DYLAIATLIMSEI------FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L + ++ ++ I L + L + Sbjct: 134 PMLLALIVGLAMFKRRVGDVYFSIVTQAIAAILTILIIGQQGLTGGVNGITDLRTLMGWD 193 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + +Y+V + I ++ + + +RD ++ + K+ Sbjct: 194 IRSNEAKTLLYFVCACLLLGCILIGRFILASKLGRLLMAMRDKEERVRFSGYDVASFKIF 253 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 F V++AF G+ GA F +SP +I ++ +GG SL ++ Sbjct: 254 VFCVAAAFAGIGGALFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGALLVNY 313 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L F SF M V++ + L L Sbjct: 314 GKTL--------------FSESFPELWLYFMGGLFIAVVMYFPNGLAGL 348 >gi|304391056|ref|ZP_07373008.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656168|ref|ZP_07909059.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304325939|gb|EFL93185.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315493170|gb|EFU82770.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 294 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 102/303 (33%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ +GAY+ L + + Sbjct: 8 LINGLSLGSIYALIALGYTMVYGIIQLINFAHGDVLMVGAYAGFAGMVLLHLDPFTSLLA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I GM++ + K IA LI + ++ G + + Sbjct: 68 AMIICAILGMLIERLAYKPLRHSTRIAVLITAIGMSLLIEYVTMYFVGAEARAYPAQTGW 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 LG + V + +++ L + +++T I A R + +Q Sbjct: 128 LGA---------SYHFGGVNLSMIQIIIVVVSVILMVVLQFIIKKTRIGKAMRAVSQDQD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + ++ FA+ SA G AG + I+P M + +LGG+ Sbjct: 179 AAKLMGISVDNTISFTFALGSALAGAAGVLWGLYYTSITPLM-GIMPGLKAFVAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + ++ + + + F F + L +V++ + Sbjct: 238 GLIPGALVGGYLVGLLETIVNSLGLSTFRDAAVF-------------LVLIIVLIFKPAG 284 Query: 339 LLR 341 +L Sbjct: 285 ILG 287 >gi|291571753|dbj|BAI94025.1| urea ABC transporter permease protein [Arthrospira platensis NIES-39] Length = 387 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 86/324 (26%), Gaps = 28/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + L + A G+ ++ G GLLSL I +++G Y+ + Sbjct: 37 PLALPVFRLKLLGRFLSLCIVALGIDLIWGYTGLLSLGHGIFFSLGGYALAMYLQLQLPE 96 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + L+ I I Sbjct: 97 GQIPDFFMLYGVENLPWFWEPFYSFPFTLVAIFLIPGIVAAILGYLVFRNRIKGVYFSIL 156 Query: 152 VADRLYFLGTTVRSL--------------IRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 L F + ++ Y + + + L + Sbjct: 157 TQAALLVFFHLFNGQQKYINGTNGLKTDTTMIFGTQAGSPAAQLVFYELSILLMILIYLL 216 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 WL IRD++ K+ FA+S A G++GA + I+ Sbjct: 217 CRWLTSGRFGRLLVAIRDDENRVRFSGYDPTGFKVLVFAISGAIAGISGALYTVQSGIIT 276 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P + + +I ++ V +GG +L T ++ F Sbjct: 277 PSFMEVAFSIEMVIWVAVGGRATLVGAILGTVLVRLGQTFLSE--------------QFP 322 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 +V+ + ++ Sbjct: 323 QVWLFFQGALFLIVVTVLPSGIVG 346 >gi|218460378|ref|ZP_03500469.1| probable branched-chain amino acid ABC transporter, permease protein [Rhizobium etli Kim 5] Length = 329 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 122/310 (39%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +GL L I + + Sbjct: 42 FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKSWGLPPELGILIGVV 101 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G++MG +++ +G Y A+ TL +S++F ++ + Sbjct: 102 GAALLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEG--------------ED 147 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MYY +L + + II + ++IR+N+ Sbjct: 148 GIQSVPRGHLFGFIDLSNSTNMYYFVLAVFLIGILIIWRFINSPFGMILKSIRENENRAT 207 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AGA + + + + VI + +LGG+ +L Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAMKSLVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ + F T + + + +L+ ++ Sbjct: 268 VGPLFGAGLVVALQNYLATSEFPV---------------TIITGVVFMICVLIFRRGIIG 312 Query: 342 LRTPSNFLER 351 S + Sbjct: 313 EFYASRLGRK 322 >gi|299133577|ref|ZP_07026771.1| inner-membrane translocator [Afipia sp. 1NLS2] gi|298591413|gb|EFI51614.1| inner-membrane translocator [Afipia sp. 1NLS2] Length = 315 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 105/299 (35%), Gaps = 24/299 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + GI L+ + A G +I+ G G S Y +G+Y I ++ L Sbjct: 20 PWFGSDVLVQFGINALLLAVLAQGWNIIGGYTGYASFGNSAFYGLGSYGVGIAMVQWDLP 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + ++S +++GLP L+ +G Y AIATL ++++ I+ K Sbjct: 80 FGVGLAFGVLLSVVFAILLGLPVLRLKGHYFAIATLALAQVMAAIVSNVKL--------- 130 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + ++ Y + L + I WL R+ Sbjct: 131 --------------AGQNIGLVLPPLNNDMLFYELALALLVAVTLTIWWLSRSKFGFGLI 176 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVI 270 IR+N++ + K+ AFA+S F +AG A I P+ F S N+ +I Sbjct: 177 AIRENEEGAKVMGVNTTLYKVMAFALSGVFSALAGGIHAYWVTFIDPESAFDISLNVKMI 236 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + + GG ++ L + E+ + + + Sbjct: 237 IMAVFGGPGTVLGPIVGALSLSAISEVLSSEVTSIAGLFFGVVVVAAVVLMPRGLADII 295 >gi|319937170|ref|ZP_08011577.1| inner-membrane translocator [Coprobacillus sp. 29_1] gi|319807536|gb|EFW04129.1| inner-membrane translocator [Coprobacillus sp. 29_1] Length = 290 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 98/303 (32%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +++ +GAY ++ S + I Sbjct: 7 MINGLSTGGMYALVAIGYTMVYGIAKMINFAHGEIIMVGAYLTYVVFSVL-GMPVVAIIA 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S G++ + K + +++ LI + +L I G A Sbjct: 66 SIAGCALLGVVTEKVAYKPLRNSSSLSVLITAIGVSYLLQNLFLILFGSA---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + + + L+ + ++L++ +T + A R + +++ Sbjct: 116 -AITFPDFLPSGQLELLGLSISYVSLLSLILTFACTILLLLFINKTKLGKAMRAVSEDKG 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +AG + S I+P I +LGG+ Sbjct: 175 AAELMGINVNNTISMTFAIGSGLGAVAGIIYGLSYSLINPY-LGAMLGIKAFIAAVLGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ F+ + F L ++L++ Sbjct: 234 GSIQGAMIGGLIIGVAEAFTVSYISSTFSDAVVFG-------------ILIFILLVKPAG 280 Query: 339 LLR 341 L Sbjct: 281 LFG 283 >gi|89902148|ref|YP_524619.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89346885|gb|ABD71088.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 367 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 95/347 (27%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I+ LL Y ++ +I+ Y + A + ++ G G+LSL + Sbjct: 26 IVVCAVAPALNLLVPKDSLFHLSDYAVALVGKIMCYAICALAMDLIWGYTGILSLGHGVF 85 Query: 74 YAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 +A+G Y+ + W +P S + + L Sbjct: 86 FALGGYAMGMYLMRQIGLEGNYKSNLPDFMVFLDWKTLPWHWTFSDSFIATLFLVLAVPG 145 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 + + A + + R F R + Sbjct: 146 LVAFVFGYFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFKRILGIPIA 205 Query: 179 YEIFMYYVLL---GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + + + WL + +RD + + + KL+ + Sbjct: 206 TPGMRMLLFVLTGVILLGFFLLARWLVAAKFGRVLQAVRDAETRVMFSGYSPLGYKLTIW 265 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+ G+AGA + I+P + +I + +GG SL I+ G Sbjct: 266 TISAMMCGVAGALYVPQVGIINPSEMSPANSIEIAIWAAVGGRASLIGPIVGAFIVNGAK 325 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + V L ++ L Sbjct: 326 SWLT--------------VAYPEFWLYFLGALFIGVTLFLPDGVVGL 358 >gi|159900317|ref|YP_001546564.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779] gi|159893356|gb|ABX06436.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779] Length = 343 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 120/335 (35%), Gaps = 20/335 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + +L L+A+ L F A + ++ + IQI I ++A +++G G++S Sbjct: 1 MQRLRPLLPLVAIG-GLASLPFAFAADTTRFWQGVFIQIFILAIYALSYDLLMGYTGMIS 59 Query: 68 LNCVIAYAIGAYSYVILGSRYGLS-IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + + G Y+ IL + + ++I ++ G +G SL+ G Y ++ T Sbjct: 60 FGHALFFGAGGYTAAILLRQAEPPSMLIVIAAVIVVGATIGAAVGALSLRVSGVYFSMIT 119 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++EI + G + Y + Y++ Sbjct: 120 LALAEIAFILFKA-----------DDPKLKPITGGEIGLQGIVVPAAIDATTYRLRFYFL 168 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 L L + + IR+N+ +L + KL A A+SS +AG Sbjct: 169 TLACMVGLYYAARRLINSPTGRVFVAIRENEPRATALGYNTLHFKLLATAISSTIAALAG 228 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 S +M + I + + I+GG+ +L A + + G Sbjct: 229 MLMVLYEKSASFEMLSVNLTIQALLMTIIGGIGTLIGPMLGAATIRLLDHGLKG------ 282 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ +R + I +++L L+ Sbjct: 283 -EFMQALLPAWLRPDLVFGIVYVVLVLFFPAGLMG 316 >gi|15806058|ref|NP_294761.1| branched-chain amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6458768|gb|AAF10612.1|AE001955_4 branched-chain amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 356 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 101/307 (32%), Gaps = 10/307 (3%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-------SRYGLSIWLL 95 ++Y + A G ++V G L L++ + G + L + + Sbjct: 45 LSLGVLYAIIALGYTMVYGVLQLINFAHSEVFITGGVVAYFVFEALKESPMNGLLKLLIA 104 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +SG +++ + + + LI + IL + G G++ Sbjct: 105 ALAAMAVSGGLNVLIERLAYRPIRGAQRLVPLITAIGVSLILQDLLRLIVGLRGLFDLS- 163 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + S + ++ +++ + + L + T + A R + Sbjct: 164 VTLPQGFADPITKVGGVNISVLNLQVKDIILIVVAGLMLIGLNLLVNHTRLGRAIRAVAH 223 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ + F + A G+ GA FA ++ I + +L Sbjct: 224 DRQTSGLMGIDSNRIISLTFLIGGALGGLGGAMFAMKYQALNAYS-GMVPGIKAFTAAVL 282 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFY-YFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 GG+ ++ +L + L ++ + L + +AL L++ Sbjct: 283 GGIGNIPGAVLGGLVLGWLETLLGTIDLFQVVPGLGWLKYITSDYKDLGAFLALLLILFF 342 Query: 335 RSHSLLR 341 + LL Sbjct: 343 KPAGLLG 349 >gi|327401812|ref|YP_004342651.1| ABC transporter integral membrane subunit [Archaeoglobus veneficus SNP6] gi|327317320|gb|AEA47936.1| ABC-type transporter, integral membrane subunit [Archaeoglobus veneficus SNP6] Length = 331 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 69/329 (20%), Positives = 126/329 (38%), Gaps = 30/329 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + ++ L + S + M I+V++A +V G G +L + I Sbjct: 12 AVMAIAAIIAILAVLPFFSSSSVIYMLGLAFIFVVYAVSWDVVAGYTGQTNLGHTVFIGI 71 Query: 77 GAYSYVILGSRYG------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 GAY+ +L + + IWL IP + + G+ +G L+ +G YLA+ T I+ Sbjct: 72 GAYTTALLQNSHRLGLDISAPIWLTIPAGGIAALLFGLGIGAVCLRLKGYYLALVTAILP 131 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 IF + + + G G V F + YY+ L Sbjct: 132 LIFIQLANIYSGVFGGYEGFSV------------------GFGKALASDVRLRYYIALAF 173 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 F+S + + L + I R +RD+++ ++ ++ KL AF VS+ F G+AGA Sbjct: 174 MFISIAAMYVLVNSRIGVKLRAVRDDEELAEAVGIDVVKYKLLAFCVSAFFAGLAGAVTV 233 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 R + D+F + +I VI+GG+ + + + Sbjct: 234 HYRLTVGVDLFDIPLMLAIILGVIIGGIGTFYGAVFGGFAIYIAKNWI------FRQIAE 287 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSL 339 F + L+ L ++IL + Sbjct: 288 TISPVFPVSDDILLYALLIVLILKAPEGI 316 >gi|326315058|ref|YP_004232730.1| urea ABC transporter permease UrtC [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371894|gb|ADX44163.1| urea ABC transporter, permease protein UrtC [Acidovorax avenae subsp. avenae ATCC 19860] Length = 406 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 102/334 (30%), Gaps = 36/334 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + ++ + L Y A GL +V G G+LSL + + +G Y+ + Sbjct: 32 DVFRLNLVGKYLTYAFVAIGLVMVWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPIST 91 Query: 96 IPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + + F+ A+A +++ ++ + G+ Sbjct: 92 KIQSTPGIPDFMDWNQITALPSFWVPFKSLPFALAAVVVLPTLLAWIVSFAMFKRRVGGV 151 Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 Y A + L + + + ++ +YYV + + Sbjct: 152 YFAIITQAVALICTVLIIGQQGYTGGVNGMTDLKTLWGWDTRTDSAKVILYYVCVALLVA 211 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 S + +++ + + +RD + + K+ F +++A G+ GA F Sbjct: 212 SIVLCRYIQTSKLGTLLLAMRDKEDRVRFSGYDVANFKVFTFCLAAALSGIGGALFTLQV 271 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG SL ++ F Sbjct: 272 GFMSPSFVGIVPSIEMVIYAAVGGRMSLVGAVYGALLVNAGKTY--------------FS 317 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 SF LM V + L L Sbjct: 318 ESFPDLWLFLMAALFIGVTMAFPMGLAGLWEERI 351 >gi|288962483|ref|YP_003452778.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288962871|ref|YP_003453165.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288914749|dbj|BAI76234.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288915137|dbj|BAI76621.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 301 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 89/304 (29%), Gaps = 16/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ Y IGA+ +I G +P+ Sbjct: 8 LINGLSLGAIYGLIAIGYTMVYGIIGMINFAHGEIYMIGAFVALITFLAIGALGITWVPL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I M+ + LI ++ + Sbjct: 68 ALLIMLVASMLFTSVYGWTVERIAYRPLRSSPRLAP--LISAIGMSIFLQNYIQILQGAR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L V ++ L L + RT++ A R ++K Sbjct: 126 SKPLQPILPGNLTLMDGAVSVSYVRLATIIITLVLMVGFTLLINRTSLGRAQRACEQDKK 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG I F + + +LGG+ Sbjct: 186 MAGLLGVNVDRVISLTFVMGAALAAVAGMMVLLIYGVIDFY-IGFLAGVKSFTAAVLGGV 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + G + + F L LV++ R Sbjct: 245 GSLPGAMLGGVVIGLIEAFWSGYVGSEWKDVATFS-------------ILVLVLIFRPTG 291 Query: 339 LLRL 342 LL Sbjct: 292 LLGR 295 >gi|83591317|ref|YP_431326.1| inner-membrane translocator [Moorella thermoacetica ATCC 39073] gi|83574231|gb|ABC20783.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Moorella thermoacetica ATCC 39073] Length = 302 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 86/289 (29%), Gaps = 7/289 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G + L++ GAY + L+IW + Sbjct: 13 IINGLSLGSIYALIALGYTMVYGIIQLINFAHGDIMMAGAYIAFFVVVYLKLNIWWAFLI 72 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + S G+++ + K + +A LI + L + G L Sbjct: 73 SMIGSALLGVLIERVAYKPLRNATRLAPLITAIGMSLFLENGGLMVLGTDIRSYPGGL-- 130 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + +L + + + T A R + + Sbjct: 131 ----ITNAQLPLVIFGMRLTATTLQLLILAITIVMMIILQYIVHYTRAGKAMRAVSYDAD 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SAF +AG + I P M + ++GG+ Sbjct: 187 AARLMGINVDNTISLTFALGSAFAAVAGILLGLYYNTIQPLM-GIMPGLKAFVAAVIGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + L + G + F + + Sbjct: 246 GLIPGAMVGGFALGIFETMVSGYWSSNLRDPIVFLLLILILLVKPAGLL 294 >gi|83944068|ref|ZP_00956524.1| inner-membrane translocator [Sulfitobacter sp. EE-36] gi|83844935|gb|EAP82816.1| inner-membrane translocator [Sulfitobacter sp. EE-36] Length = 446 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 117/340 (34%), Gaps = 31/340 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R+ +L L V ++ L + ++ Q+ I ++FA ++++G G+L Sbjct: 30 RMRSGSLVLTLAPWVIASVVLAILPMVFTNNSALTIMNQMSITIVFALAYNMLLGQGGML 89 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY----L 122 S + +G ++ + + + + + + + G GM + + F Sbjct: 90 SFGHAVYAGVGGFACMHIMNMSDFFSTIPLVILPVFGGLFGMGLAMIVGAFSTRNAGTVF 149 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ +L + E+ + G+ GI F + +I Sbjct: 150 AMISLGVGELIAACSVIIVAFFGGEEGIS------------GDRTYAQPFFGVEFLQQIE 197 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 +YY+ G +SA+++ RT + +RDN + L + + + +F S F Sbjct: 198 VYYLTAGWVVISAALMYLWSRTPVGRMANAVRDNPERAEFLGYSSRWVRFYSFVASGFFA 257 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G++G FA + + ++ + + + I++ + LGG+ + + Sbjct: 258 GVSGGLFAINYEILTEENLNTASSGIILLVTFLGGVGFFFGPIIGAIAFTLLQTVLS--- 314 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ L L Sbjct: 315 ------------LSTELWAFYAGVLFLSTVMFFPGGLAGL 342 >gi|293393961|ref|ZP_06638267.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291423521|gb|EFE96744.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 308 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 84/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIAIAALMMMGIDASWL 71 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 +++ I I + R Sbjct: 72 LIGAGFLASIVIASAYGWSIERVAYKPVRHSKRLIALISAIGMSIFLQNYVSLTQGSRDV 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + L ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGRWVLGESNGFAATVSTMQIIIWLVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMIGGLVLGVAEALTSAYLSAEYKDVVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|94312908|ref|YP_586117.1| ABC transporter permease [Cupriavidus metallidurans CH34] gi|93356760|gb|ABF10848.1| ABC-type transport system, permease component [Cupriavidus metallidurans CH34] Length = 287 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 90/307 (29%), Gaps = 27/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A GL++V G L + + Y GAY + G++ WL + Sbjct: 8 FLNGLTLGGVYSLVALGLTLVYGILHVPNFAHGAFYMAGAYVSYYAMTTLGMNYWLAMLA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A++ M+ I +I + L G + Sbjct: 68 AAVVVAMLSMLADRLVFYPLRHAPEIHDMIAAIGILLFLEAGAQALWGADFHRMPTP--- 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +++ L + L+L RT + + N++ Sbjct: 125 ---------YGQMVEIFGLTAPLQRLLIIVAAFGLMVLLHLFLTRTVTGSTIVAMAQNRE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + L FA+S A +A +A + I+ILGGM Sbjct: 176 GAALVGIDAMRVTLLVFAISGALAAIAATLYAP--INLVYPSMGNLVITKAFVIIILGGM 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + L +++ +R Sbjct: 234 GSIPGAIVGGLIIGMAESFGGFYIS-------------TDYKDIIAFLLLVIILSVRPQG 280 Query: 339 LLRLRTP 345 L +T Sbjct: 281 LFAGKTA 287 >gi|238793538|ref|ZP_04637162.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia intermedia ATCC 29909] gi|238727128|gb|EEQ18658.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia intermedia ATCC 29909] Length = 308 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGAAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|58616658|ref|YP_195867.1| putative membrane spanning protein [Achromobacter xylosoxidans A8] gi|311109726|ref|YP_003982578.1| inner-membrane translocator 73 [Achromobacter xylosoxidans A8] gi|58416249|emb|CAI47843.1| putative membrane spanning protein [Achromobacter xylosoxidans] gi|310764415|gb|ADP19863.1| inner-membrane translocator 73 [Achromobacter xylosoxidans A8] Length = 332 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 59/314 (18%), Positives = 113/314 (35%), Gaps = 15/314 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +A++ L L F G + + ++LIY + L+I +G GL+SL + Sbjct: 12 LVPVAIILLLALVPFWGYFTDSTFYVAFYARVLIYAIAVVALNIALGFGGLVSLGHALFM 71 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 IGAYS I S W+ + + ++SG G I G SL+ G + TL +++ Sbjct: 72 GIGAYSVAIPSFYGIDSGWVHLFICLLVSGLLGYITGAISLRTTGIGFIMITLAFAQMGY 131 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + K S+ + +Y V + LS Sbjct: 132 FLFVSLKQYGG---------------DDGTSIANTSKMLGLDFGGVYTVYGVAFVLLVLS 176 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 LR + R R N + ++ L ++ +S+ +AG A Sbjct: 177 TWWTAKLRVSPFGMVLRGARQNIRRVNAIGFQAQQYLLVSYVLSAMLCSVAGFLLANLNA 236 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 SP + + ++ +++LGG+ ++ +G+ E+ ++ Sbjct: 237 FASPTTLSWIISGDLVVMLVLGGIGTVFGPLLGALAFLGLEEVLKMFTTHWLAVFGLAIV 296 Query: 315 SFNMRHTTLMVIAL 328 + +V L Sbjct: 297 VIGLVGKAGIVGFL 310 >gi|55376687|ref|YP_134538.1| branched-chain amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] gi|55229412|gb|AAV44832.1| branched-chain amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 312 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 95/291 (32%), Gaps = 6/291 (2%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 V+ A GL+I+ G +G+++L IGAY+ + ++ GL + + + V Sbjct: 9 LQFLDSFAFIVLAAAGLAIIFGIMGVINLAHGEFILIGAYTATLAVTQLGLPLVVAMLVG 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA----DR 155 +++G G++ + + +I + + + G+ + R Sbjct: 69 GVVTGLFGILTERVIISGAWPNWVSQRTLGRDIIEPLYNRLADSMVATFGLSLILTQGAR 128 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + F + + F Y + + L + RT R Sbjct: 129 IRFGNSIDQIATPFGAISYGAFSYSTYRIVLAGVSIGLLLATYYLFTRTDFGMRARATIQ 188 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ ++ + F + SA G+ GA FA + V++ Sbjct: 189 DKETAQAMGVNTDRMYMLTFGIGSALAGLTGALFAPVISM--QPTLGDQFLVEAFVAVVV 246 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 GG + + A + +L ++ + + + + I Sbjct: 247 GGPSVVLGTALSGGVLGAILATFSNLYGTFIGRIALLVAALIALRFLPDGI 297 >gi|89069330|ref|ZP_01156689.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] gi|89045097|gb|EAR51168.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] Length = 345 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 119/336 (35%), Gaps = 9/336 (2%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 ++ ++ L + +LL + L A + + + + ++ GL +G+ Sbjct: 7 SQRRGLIGALLLSLLILLIVGLYALWGESWQARVLYAAFVNLIVVIGLQTFMGNANFAVF 66 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + I AY+ I + + L ++ + L + Sbjct: 67 SHAAFMGIAAYAAAICVTPVAMKAVSLPDAPWGLNAFE--------MSPLASALVALGIT 118 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + L + G + +A + + F + F I IF + Sbjct: 119 GTLGLLTGLFMSRLTGVGVTIVSIAILVIVHSIFLHRTDIFKGNQALFGIPRIFGLTHVT 178 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + ++ R +A+ R D++ ++ + A+L A+ VS+ F AG Sbjct: 179 VLAIVAIFAARLFRESAVGLRLRAAADDEIGARAMGVDVHRARLVAWVVSTLFFAAAGIA 238 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 +A IS F F+ + ++++ILGG+ S+S T ++ +EL + + Sbjct: 239 YAFFLGTISARPFYFNFVFLTVAMLILGGLRSVSGAVFGTLLITIGLELVRWLETGPTLA 298 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 +K L+ + + V+ R H L+ R Sbjct: 299 GVKLP-QMLGLSGLLLGVVIVAVMAFRPHGLMGNRE 333 >gi|240140118|ref|YP_002964595.1| putative branched-chain amino acid ABC transporter, permease protein [Methylobacterium extorquens AM1] gi|254562557|ref|YP_003069652.1| branched-chain amino acid ABC transporter permease [Methylobacterium extorquens DM4] gi|240010092|gb|ACS41318.1| putative branched-chain amino acid ABC transporter, permease protein [Methylobacterium extorquens AM1] gi|254269835|emb|CAX25813.1| putative branched-chain amino acid ABC transporter, permease protein [Methylobacterium extorquens DM4] Length = 385 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 100/362 (27%), Gaps = 36/362 (9%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N + K + +++ + L + + ++ + L Y A GL I G G+LSL Sbjct: 13 NPFMKPVEWVSLALLAGVILVVLPLVLDGFRLNLVGKYLTYAFVALGLVICWGYAGILSL 72 Query: 69 NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 + + +G Y + + L Sbjct: 73 GQGVFFGLGGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQITELPWFWHPFQSLPLT 132 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167 + +A L L + Sbjct: 133 LLLVVAVPVAFAFLISVAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 192 Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + + +Y+V G+ + +++++ + +R+ + + Sbjct: 193 RTLHGWDIRQDSAKFVLYFVNGGLLIGCILMAQYVKKSKLGRILVAMREKEDRVRFSGYS 252 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + K+ A+ +++AF + GA F +SP ++ ++ +GG SL Sbjct: 253 VAGFKVFAYCLAAAFAAIGGAMFTLQVGFMSPSFVGIVPSVEMVIYTAVGGRLSLFGAVW 312 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 T ++ F SF + V+L+ + L + Sbjct: 313 GTLLVNWAKT--------------SFSESFPDLWLFGLGGLFIAVVLIFPNGLAGIWREH 358 Query: 347 NF 348 Sbjct: 359 IE 360 >gi|166362771|ref|YP_001655044.1| amino acid transport system permease protein [Microcystis aeruginosa NIES-843] gi|166085144|dbj|BAF99851.1| amino acid transport system permease protein [Microcystis aeruginosa NIES-843] Length = 371 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 121/372 (32%), Gaps = 61/372 (16%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ S+ I IY +FA GL++ G GL++ V +GAY+ V+L + I+ I Sbjct: 3 DYLVSLTIWAGIYAIFALGLNLQWGFTGLINFGHVAFATLGAYATVLLTLQGVPMIFAAI 62 Query: 97 PVSAMIS-----------------------------------------GACGMIMGLPSL 115 + + + G+ G+ L Sbjct: 63 VGAILGALLGLAIGFSTLRLRADYLAIVTIGVSELIRLLVLNEDWLTKGSFGLQRYPLPL 122 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + +I I W+ N + A ++ + S Sbjct: 123 DINPSFAVKLLIIALFTLLAIFALWQLGRNLQRQWREAGQISGKSYQPTQKRALIFWGSL 182 Query: 176 FVIYEIFMYY-----------------VLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I +F+Y V+L + L + + L R+ + IR++++ Sbjct: 183 GAIILLFLYINGVISLNDYNYKAGLMVVVLVLLALVYTGLELLLRSPWGRILKAIREDEE 242 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L + + KL + + A G+AGAF A I P F+ I+ILGG Sbjct: 243 IPRALGKNVFWYKLQSLMLGGAIAGLAGAFLAWQLTTIYPTNFEPLLTFNAWIIIILGGS 302 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S + I L + + D ++ + L ++++ R Sbjct: 303 GSNAGTLLGAVIFWAYDSLTRFILP---QLDIFNDSQLGALRIMIIGLLLMVLMIWRPQG 359 Query: 339 LLRLRTPSNFLE 350 +L + + Sbjct: 360 ILGKKEELTLGK 371 >gi|320538313|ref|ZP_08038194.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Treponema phagedenis F0421] gi|320144812|gb|EFW36547.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Treponema phagedenis F0421] Length = 294 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 100/310 (32%), Gaps = 27/310 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLL 95 + + IY + A G ++V G + L++ +GAY + + LS + Sbjct: 6 LINGLSLGSIYALIALGYTMVYGIVLLINFAHGDVLMLGAYVGYYVLLTFGTSPLSFVIA 65 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + ++ A G+I+ + + + + +LI + IL + Sbjct: 66 IGTAMVVCAAVGIIIERFAYRPLRNAPRLNSLITAIAVSLILQNGARVL----------P 115 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + V+ L + + T A R + Sbjct: 116 FIGPDPRQFPTLPTVKISVGDFDISNIQLIVVSVSIGLMFLLNYIVNHTKAGKAMRAVSF 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + +I FA+ SA G FA + +I P M + +L Sbjct: 176 DATAAGLMGVSINGIISFTFALGSALAAAGGVLFALAYPQIEPTM-GAMPGLKAFIAAVL 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ IL V L G + + F L +++L++ Sbjct: 235 GGIGSIPGAMIGGYILGLVETLTKGFLSSQYADAISFS-------------LLIIILLVK 281 Query: 336 SHSLLRLRTP 345 L+ +T Sbjct: 282 PSGLMGKKTR 291 >gi|306845460|ref|ZP_07478034.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella sp. BO1] gi|306274203|gb|EFM56019.1| branched chain amino acid ABC transporter, ATP-binding/permease protein [Brucella sp. BO1] Length = 570 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 105/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ G LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLHGINLAIVTLSFAAAFDTVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|303249298|ref|ZP_07335530.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] gi|302489304|gb|EFL49261.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] Length = 304 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 111/284 (39%), Gaps = 13/284 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L + Y Q + L+ +G G +SL IGAY+ Sbjct: 12 LAFFFGALLAVGLFTPGYQLIGVNQHMFLAANVLALNFCLGLGGQISLAQGAFAGIGAYA 71 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 V+L +RY + ++ P + +G ++ P + +LA+ATL +S + N+ + Sbjct: 72 SVLLHARYPGATLVIAPAVVLGTGLLAALISRPMERLGKGFLAMATLCVSLVCINVALTL 131 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + +T G AG + + + + +++ + + + A + L Sbjct: 132 ENVTGGSAG-------------LMVERKLALPGLGELAGDRVTFFLFVLLLAVGAYVFLA 178 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +R + + A RD++ A SL A+ +F + AF AG + ISP+ Sbjct: 179 VRDSRLGRALAACRDDRFAASSLGIDRPAARAVSFGLGGAFSAAAGLLYGHYTGFISPEQ 238 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 F ++ + +++GG +L + A +L + + Sbjct: 239 FNLELSLKALLFLVIGGPGNLLRPLFAALVLETAMSHLQFLGDA 282 >gi|312113677|ref|YP_004011273.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100] gi|311218806|gb|ADP70174.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100] Length = 349 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 110/344 (31%), Gaps = 24/344 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R K A+ L L + + Q+L + +FA ++++G +GL Sbjct: 14 IRPFKASPSFLHAALFAGLAAVLAILPLLGL--YPFVLAQLLCFALFACAFNMLLGFVGL 71 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LS + + + +Y ++ +P G+ P L A Sbjct: 72 LSFGHAMFFGMASYVAAYTAKSGIAALPFWLPGVGRFDLPVGLPPFAPELAMLTGAAVAA 131 Query: 126 TLIMSEIFQNILIKWKPITNGK-------AGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 L + I + + ++ + R + Sbjct: 132 VLGLIVGSLAIKRQGIYFAMITLALAQMVYFFSLQAPFTGGENGIQGVPRGHFLGFIDLR 191 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + +YYV+ + F +I + + + IRDN+ SL KL+ F +S Sbjct: 192 DDTTLYYVVAAIFFAGFLLIYRIIHSPFGQVLKAIRDNEPRAISLGYRTQRYKLAVFVLS 251 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 +A G+AG A + ++ + V+ + ++GGM ++ I+I + Sbjct: 252 AALAGLAGGMKAIVSQIATLSDVHWTMSGEVVLMTLVGGMGTIFGPVVGAVIVIAIQTYL 311 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + T + + +++ ++ Sbjct: 312 NNL---------------GAWVTIVQGTIFVICVMLFREGIVGR 340 >gi|83955065|ref|ZP_00963721.1| inner-membrane translocator [Sulfitobacter sp. NAS-14.1] gi|83840394|gb|EAP79567.1| inner-membrane translocator [Sulfitobacter sp. NAS-14.1] Length = 446 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 117/340 (34%), Gaps = 31/340 (9%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R+ +L L V ++ L + ++ Q+ I ++FA ++++G G+L Sbjct: 30 RMRSGSLVLTLAPWVIASVVLAILPMVFTNNSALTIMNQMSITIVFALAYNMLLGQGGML 89 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY----L 122 S + +G ++ + + + + + + + G GM + + F Sbjct: 90 SFGHAVYAGVGGFACMHIMNMSDFFSTIPLVILPVFGGLFGMGLAMIVGAFSTRNAGTVF 149 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 A+ +L + E+ + G+ GI F + +I Sbjct: 150 AMISLGVGELIAACSVIIVAFFGGEEGIS------------GDRTYAQPFFGVEFLQQIE 197 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 +YY+ G +SA+++ RT + +RDN + L + + + +F S F Sbjct: 198 VYYLTAGWVVISAALMYLWSRTPVGRMANAVRDNPERAEFLGYSSRWVRFYSFVASGFFA 257 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G++G FA + + ++ + + + I++ + LGG+ + + Sbjct: 258 GVSGGLFAINYEILTEENLNTASSGIILLVTFLGGVGFFFGPIIGAIAFTLLQTVLS--- 314 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ L L Sbjct: 315 ------------LSTELWAFYAGVLFLSTVMFFPGGLAGL 342 >gi|22124338|ref|NP_667761.1| branched-chain amino acid transporter permease subunit LivH [Yersinia pestis KIM 10] gi|45442994|ref|NP_994533.1| branched-chain amino acid transporter permease subunit LivH [Yersinia pestis biovar Microtus str. 91001] gi|51594582|ref|YP_068773.1| branched-chain amino acid transporter permease subunit LivH [Yersinia pseudotuberculosis IP 32953] gi|108806215|ref|YP_650131.1| branched-chain amino acid transporter permease subunit LivH [Yersinia pestis Antiqua] gi|108810323|ref|YP_646090.1| branched-chain amino acid transporter permease subunit LivH [Yersinia pestis Nepal516] gi|145600674|ref|YP_001164750.1| branched-chain amino acid transporter permease subunit LivH [Yersinia pestis Pestoides F] gi|153947361|ref|YP_001399242.1| branched-chain amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|153997136|ref|ZP_02022269.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis CA88-4125] gi|162419304|ref|YP_001607987.1| branched-chain amino acid transporter permease LivH [Yersinia pestis Angola] gi|165926228|ref|ZP_02222060.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939102|ref|ZP_02227653.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011681|ref|ZP_02232579.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213519|ref|ZP_02239554.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401806|ref|ZP_02307294.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421119|ref|ZP_02312872.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426247|ref|ZP_02318000.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026184|ref|YP_001722689.1| branched-chain amino acid transporter permease subunit LivH [Yersinia pseudotuberculosis YPIII] gi|218930809|ref|YP_002348684.1| branched-chain amino acid transporter permease subunit LivH [Yersinia pestis CO92] gi|229837134|ref|ZP_04457299.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229839494|ref|ZP_04459653.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229900057|ref|ZP_04515194.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229900497|ref|ZP_04515626.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270488852|ref|ZP_06205926.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Yersinia pestis KIM D27] gi|294505472|ref|YP_003569534.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis Z176003] gi|21957114|gb|AAM84012.1|AE013643_1 high-affinity branched-chain amino acid ABC transport system membrane permease [Yersinia pestis KIM 10] gi|45437861|gb|AAS63410.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis biovar Microtus str. 91001] gi|51587864|emb|CAH19467.1| ABC type branched-chain aa transport system, permease [Yersinia pseudotuberculosis IP 32953] gi|108773971|gb|ABG16490.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis Nepal516] gi|108778128|gb|ABG12186.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis Antiqua] gi|115349420|emb|CAL22393.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis CO92] gi|145212370|gb|ABP41777.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis Pestoides F] gi|149289442|gb|EDM39520.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis CA88-4125] gi|152958856|gb|ABS46317.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|162352119|gb|ABX86067.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis Angola] gi|165912875|gb|EDR31501.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921752|gb|EDR38949.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989450|gb|EDR41751.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205192|gb|EDR49672.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166961248|gb|EDR57269.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048699|gb|EDR60107.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054766|gb|EDR64570.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752718|gb|ACA70236.1| inner-membrane translocator [Yersinia pseudotuberculosis YPIII] gi|229682516|gb|EEO78603.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229686837|gb|EEO78916.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229695860|gb|EEO85907.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706077|gb|EEO92086.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262363537|gb|ACY60258.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis D106004] gi|262367466|gb|ACY64023.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis D182038] gi|270337356|gb|EFA48133.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Yersinia pestis KIM D27] gi|294355931|gb|ADE66272.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia pestis Z176003] gi|320013596|gb|ADV97167.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 308 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 84/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y I +Y I+ + + + Sbjct: 12 MFNGITLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMVGIDASWL 71 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + +++ I I + R Sbjct: 72 LIGCAFLVSIVIASTYGWSIERVAYKPVRRSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWTLGESNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLVLGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|262377156|ref|ZP_06070381.1| urea ABC transporter, permease UrtC [Acinetobacter lwoffii SH145] gi|262307894|gb|EEY89032.1| urea ABC transporter, permease UrtC [Acinetobacter lwoffii SH145] Length = 357 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 101/341 (29%), Gaps = 27/341 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +L + L L Y ++ +I+ + A L +V G G+LSL + + Sbjct: 21 FAILLALPWLHLLPADSTLHLSAYWVTLIGKIMCLALVALALDLVWGYAGILSLGHGLYF 80 Query: 75 AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 A+G Y++ + W +P + + + L L Sbjct: 81 ALGGYAFGMYLMRQSAGEGIPDFMRFLSWTEVPWFWVGTEYFLWSLALVVLVPGIIAFIF 140 Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + +I + + + + Sbjct: 141 GFFAFRSKIKGVYFSIITQAITFAAALLFFRNETGFGGNNGFTGFKTILGMDITSASMRA 200 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + ++ + L + L IRD++ L ++ KLSA+ +S+ Sbjct: 201 SLCFITALVLLLCFIGLRHLMNKPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVI 260 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA + I+P +I + V GG +L ++ GV Sbjct: 261 AGIAGALYVPQAGIINPSEMNPVNSIEMAVWVAAGGRGTLIGPLIGAGVINGVKTY---- 316 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F ++ ++ +V + ++ L Sbjct: 317 ----------FTSAYPEAWLLILGALFIVVTIFLPKGIIGL 347 >gi|50085078|ref|YP_046588.1| branched chain amino acid ABC transporter [Acinetobacter sp. ADP1] gi|49531054|emb|CAG68766.1| branched-chain amino acid transport protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 356 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 135/328 (41%), Gaps = 16/328 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + + FLF+ S +++ + L+ + GL+I+ G G LSL A+ Sbjct: 28 ILFWFFVAIAFLFIPFVGSDYLFNAILVPYLVLALAGLGLNILTGFTGQLSLGSAAFMAV 87 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ L + L + + I+ G+I+GLPSL+ +G YL ++TL Sbjct: 88 GAFATYNFELRIPQLPLLLSLFLGGTIAAVFGVIVGLPSLRIKGFYLIVSTLAAQFFIPW 147 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + ++ TN A + + + Y + + + Sbjct: 148 LFTQYGWFTNYSASGVITAPKLV-------------ILGYSLDSPVGHYLLTISIVLGLT 194 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 I L + ++ IRD + A +L + KL AFA+SS ++G+AGA +A A Sbjct: 195 LIARNLLNSQYGRNFQAIRDMETAAVTLGISAAKTKLLAFAISSFYLGVAGALWAFAYLG 254 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 I + + ++ I+I+GG++SL+ A ++ + + ++ +F Sbjct: 255 TIEANGLDLDRSFQILFIIIIGGLSSLAGSFFGAAFIVLLPIILSFLSNLFFGQGFDQAL 314 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 + I + ++ L+RL Sbjct: 315 -LQNIQKIIFGILIIYFLIREPEGLVRL 341 >gi|148273746|ref|YP_001223307.1| branched-chain amino acid ABC transporterpermease protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831676|emb|CAN02645.1| branched-chain amino acid ABC transporter,permease protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 486 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 95/291 (32%), Gaps = 29/291 (9%) Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL- 115 S++ G+ GL + GA + + GL+ L I ++ ++ GA G + Sbjct: 221 SLIYGTTGLNNFAHGELVTFGALMAYLFSNVLGLNPVLAIIITVVLGGAFGFVQDAALWK 280 Query: 116 KFRGDYLAIATL-IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 R L + L I++ L G + + + ++F Sbjct: 281 PLRKRRLGLVPLMIVTIGLSLALRYVFQFIFGADRLTLPNSPAPFLVVGPVSLKFTDVAG 340 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + V + + + + T I A R + DN+ + + Sbjct: 341 AIVSIVLLLAVAYVLLY------------TKIGKATRAVSDNRSLAAASGIDVEGVIRVV 388 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 + +A ++G F A + S ++V S V+LGG+ + + ++ Sbjct: 389 WIGGAALAALSGVFIAYYQSL--RWDTGASILLLVFSAVVLGGLGTAFGALIGSIVIGVF 446 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 + + + ++ + +++L+R +L + Sbjct: 447 INVSTMVLP-------------ENMKYVAALVVMIVILLVRPQGILGRKDR 484 >gi|329937892|ref|ZP_08287374.1| bifunctional carbohydrate binding and transport protein [Streptomyces griseoaurantiacus M045] gi|329302849|gb|EGG46738.1| bifunctional carbohydrate binding and transport protein [Streptomyces griseoaurantiacus M045] Length = 651 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 112/326 (34%), Gaps = 41/326 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +V + + G + + ++G+Q + + A+G++ V+ S G + L+ Sbjct: 29 ALTALIVLVIAMSALSGDFLTTDNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 87 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ A + +G+ + L + ++ A G++ G + ATL M + + Sbjct: 88 ALSATVLAWSATSHGVPVVLAVVLAVATGVAAGLVNGFLIAYGKLPPFI-ATLAMLSVGR 146 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + +G + +L + P ++ + ++LG Sbjct: 147 GLSLVV-------SGGSPIPFPDSVSHLGDTLGGWLPVPVLVMVVLGLVAALILG----- 194 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 RT I + I N++A + KL+ +A+S F AG AA Sbjct: 195 --------RTYIGRSMYAIGGNEEAARLSGLRVKKQKLAIYALSGLFAAAAGIVLAARLS 246 Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308 P + I+ V++GG S IL + ++ F Sbjct: 247 SAQPQAAD-GYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSAF-- 303 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILM 334 ++ + + L +L+ Sbjct: 304 ----------WQQVVIGVVIALAVLL 319 >gi|306840729|ref|ZP_07473478.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO2] gi|306289302|gb|EFM60546.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO2] Length = 328 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 123/343 (35%), Gaps = 28/343 (8%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ + L + L + ++ +G + ++ +I+ + L +V Sbjct: 1 MTELTQPLPQTRPSYAGLIGIVAIIAASVVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G G+ +L + GAY I + + L+ + + G++ G L+ G Sbjct: 60 GYCGIATLGHAALFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 + ++ + +F K T G G+ G F +Y Sbjct: 120 LAQLVLSIAVVHLFHEAANKASSWTGGSDGLSSISPDPIFGI------------FEFDLY 167 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 +Y + + +S + ++ R+ R ++++ ++ ++ A+L + +S Sbjct: 168 GRTVYIYAVILLLISFVFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A G+ GA A S + D F+ + + +++LGG SL T + + ++ Sbjct: 228 AVAGIGGALNAISTQVVGLDSLSFTMSAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVS 287 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 N +++ T++ L V+L L Sbjct: 288 TANPFHW--------------LTMVGALLIAVVLFAPRGLYGT 316 >gi|319794219|ref|YP_004155859.1| urea ABC transporter permease urtc [Variovorax paradoxus EPS] gi|315596682|gb|ADU37748.1| urea ABC transporter, permease protein UrtC [Variovorax paradoxus EPS] Length = 397 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 105/329 (31%), Gaps = 36/329 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + ++ + L Y A GL +V G G+LSL + + IG Y+ + Sbjct: 32 DIFRLNLVGKYLTYAFVAVGLVMVWGYGGVLSLGQGVFFGIGGYAMAMFLKLEASDPITT 91 Query: 96 IPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + L F+ L++A ++++ + L+ + G+ Sbjct: 92 KIQSTPGIPDFMDWNQITELPALWLPFKSLPLSLALVVLAPMALAWLVSFAMFKRRVGGV 151 Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 Y A + L + + + +YYV +G+ Sbjct: 152 YFAIITQAVALICTVLIIGQQGYTGGVNGMTDLKTMLGWDTRTDGAKYILYYVCVGLLVA 211 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 S + +++ + + +RD + + K+ F +++ G+ GA FA Sbjct: 212 SILLCRFIQTSKLGTLLLAMRDKEDRVRFSGYDVSNFKVFIFCLAAGLSGIGGAMFALQV 271 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG SL ++ L F Sbjct: 272 GFMSPSFVGIVPSIEMVIFCAVGGRMSLVGAVYGALLVNAGKTL--------------FS 317 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 SF LM V + L L Sbjct: 318 ESFPDLWLFLMAGLFIGVTMAFPMGLAGL 346 >gi|227113842|ref|ZP_03827498.1| branched-chain amino acid transporter permease subunit LivH [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227329281|ref|ZP_03833305.1| branched-chain amino acid transporter permease subunit LivH [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 308 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 ++ +++ + I I + R Sbjct: 72 LIGVAFIAAVVISSAYGWSIERVAYRPVRTSKRLIALISAIGMSIFLQNYVSLNQGSRDV 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWVLGESNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L + F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|86751314|ref|YP_487810.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86574342|gb|ABD08899.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 355 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 106/322 (32%), Gaps = 14/322 (4%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSR 87 ++ +I I+ +++G G +S + Y IG+Y+ I Sbjct: 29 PFVFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFYGIGSYAMAIALYTMGP 88 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 ++ I + ++ + +GL SL+ + A+ TL ++ F + + +T G+ Sbjct: 89 NWGAVATGIVIGLPLAALLALGIGLFSLRVEAIFFAMITLAVASAFLVLASQLSWLTGGE 148 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G + + + I YY++L C +L + + Sbjct: 149 DGRSFSLP----ELLRPGTVFIQDLFGVRINGRILTYYIILVGCAAMILGLLRVVNSPFG 204 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSEN 266 + +R+N+ +L +F A +++ AG A PD FS Sbjct: 205 RVLQAVRENRFRAEALGYRTVFHLTYANVLAALVAACAGILNAMWLRYAGPDTSLSFSIM 264 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF------NMRH 320 + ++ +V++GGM ++ I I + + R Sbjct: 265 LDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASTAAADAGLPLLPGLLHPDRW 324 Query: 321 TTLMVIALFLVILMRSHSLLRL 342 + + + ++ Sbjct: 325 LLWLGLLFVASVYFFPTGVVGR 346 >gi|238759631|ref|ZP_04620792.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia aldovae ATCC 35236] gi|238702174|gb|EEP94730.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia aldovae ATCC 35236] Length = 308 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMVGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGCAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGIAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|134295488|ref|YP_001119223.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134138645|gb|ABO54388.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia vietnamiensis G4] Length = 417 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 99/291 (34%), Gaps = 12/291 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 Q + Q V+ A ++ +G+ GLLS +GA++ Sbjct: 14 LFAACLALPAWLWPQGAVLGYLAQTAALVVLALSYNLQLGTTGLLSFGHAAVAGVGAFAA 73 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +R G + LL V + A G + GL + + G A+ TL + E Sbjct: 74 AHWFNRVGAPLPLLPLVGGVAGAAFGCVAGLLATRRAGTVFAMITLGIGECVAAAAWSVP 133 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 G G+ + + Y ++ C SA + L Sbjct: 134 AWFGGVGGVPI------------DRAGGAPWGGWQFGAPTHAYALIAAWCIGSALAMYAL 181 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 RT ++ +RDN +L T +L+ +S F G+AG + +PD Sbjct: 182 TRTPLARLANAVRDNPARVAALGTEPRHVRLAMVTCASFFAGVAGTLTLIDVEIATPDSV 241 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + + V+ ++GG + A +L + + G++ + L Sbjct: 242 SMARSATVLIAAVIGGTGTFFGPALGAVVLTALSVVVAGVSRAWALYLGVL 292 >gi|194292489|ref|YP_002008396.1| high-affinity branched-chain amino acid transport protein, livhm family [Cupriavidus taiwanensis LMG 19424] gi|193226393|emb|CAQ72342.1| high-affinity branched-chain amino acid transport protein, livHM family [Cupriavidus taiwanensis LMG 19424] Length = 285 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 88/305 (28%), Gaps = 27/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A GL++V G L + + Y GAY L + G++ WL + Sbjct: 6 ILNGLTLGGVYSLVALGLTLVYGILHVPNFAHGAFYMAGAYVSYYLMTALGVNYWLAMLG 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A+ M+ + + +I + L G + Sbjct: 66 AALAVAVLSMLADRLVFHPLRNSPELHDMIAAIGILLFLEAGAQALWGADFHRMPTP--- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ L + L+L RT + N++ Sbjct: 123 ---------YGQIVDVFGLTAPLQRLLIIGAAFALMVLLHLFLTRTMTGATIMAMAQNRE 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + L FA+S A +A +A + I+ILGGM Sbjct: 174 GAALVGIDATRVTLLVFAISGALAAIAATLYAP--INLVYPSMGNLVITKAFVIIILGGM 231 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + L +++ +R Sbjct: 232 GSIPGAIVGGLIIGMAESFGGFYVS-------------TDYKDIIAFVLLVVILSIRPQG 278 Query: 339 LLRLR 343 L + Sbjct: 279 LFAGK 283 >gi|254246680|ref|ZP_04940001.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|124871456|gb|EAY63172.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia cenocepacia PC184] Length = 326 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 35 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 94 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W ++ ++ ++ GA G+ + L++ + L+++ ++ G Sbjct: 95 YFGLPYWAMLVLAPVLVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 154 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 155 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 204 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 205 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 262 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 263 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 308 Query: 327 ALFLVILMRSHSLLR 341 + +V+L R L Sbjct: 309 IMAIVLLFRPAGLFG 323 >gi|86751759|ref|YP_488255.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86574787|gb|ABD09344.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 290 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 97/306 (31%), Gaps = 26/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + ++ + A GL++V G LG+++L Y +GAY W+ + Sbjct: 10 LLNAVQYGMVLFLVASGLTLVFGILGVINLAHGAFYMLGAYLAY----------WIALMT 59 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G + L + + I L + +L+ + I + Sbjct: 60 GNFLVALVGGVAIAFVLGLALESVFIRWLYGRDHLAQVLLSFGLILVIDEARQLLFGKDV 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + Y ++ + + ++A I + RT I R +N++ Sbjct: 120 HSVAPPDWLSGSLQLTDNLSYPVYRLAICVFCLAVAALIFFVITRTKIGMIVRAGAENRE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L FA A + G A I+ +V+LGG+ Sbjct: 180 MTRVLGIDYDKVNRLVFATGIALAALGGIVTAP--MSTVYPGMGDGMLILSFVVVVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S++ A ++ L+ + + +V+L R + Sbjct: 238 GSVAGAAVGALLIGFTDTFGKVFFPSVSG--------------MLIYLLMAIVLLWRPNG 283 Query: 339 LLRLRT 344 +L R Sbjct: 284 ILGRRE 289 >gi|320199632|gb|EFW74222.1| Branched-chain amino acid transport system permease protein LivM [Escherichia coli EC4100B] Length = 345 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 9/206 (4%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + +IY++ GL++VVG GLL L YAIGAY++ +L YGL Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 W +P++ +++ A G ++G P L+ RGDYLAI TL EI + +L+ IT G GI Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222 Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + F G + FF IF+Y V L + LS +I L Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTI 227 R + AW +R+++ A SL + Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSP 308 >gi|238895344|ref|YP_002920079.1| ABC-type high-affinity branched-chain amino acid transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|238547661|dbj|BAH64012.1| ABC-type high-affinity branched-chain amino acid transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 304 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y + AY I + P+ Sbjct: 9 LINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMVSAYLCAIGLALLSFFGIHSFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ + + I + Sbjct: 69 LIFATLVFTIVVTGVYGWAIERIAYRPLRNSTRLAPLISAIGMSLILQNYVQLSQGPNQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ S V ++L+ + ++ T + R + +++ Sbjct: 129 GIPTLLSGALRMTVGDGVVQITWTKVFILVAALVGMLILTWIIQYTRLGRICRATQQDRR 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A G+AG + F I + +LGG+ Sbjct: 189 MAAILGINTDRVISLVFVIGAAMAGLAGVLVTMNYGTFDFY-IGFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L G+ + + F L +++ R Sbjct: 248 GSLPGAMLGGLLLGVAEAQFAGLVNSDYKDVFSF-------------ALLVAILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|256828424|ref|YP_003157152.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256577600|gb|ACU88736.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 297 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 96/307 (31%), Gaps = 22/307 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G ++V G L L++ + +GAY + + + + + V Sbjct: 10 FLNSLTLGSLYALIAIGYTMVYGILRLINFAHSEIFMLGAYFVFWGITLFHMPWAVAMIV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ + + D I+ LI + L + Sbjct: 70 SVISVAGIGILVDRIAYRPLRDAPRISALISAIGVSFFLQNVAIVFFQA----------I 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R V +V + FL ++ + T R I + + Sbjct: 120 PRQVYRPEWLEKPLLWGDVRVLPLTLFVPVLSFFLMLVLVYIVYHTKAGLGMRAISKDIE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + F + SA +G +A ++ P M ++GG+ Sbjct: 180 TSYLMGVPVNKVIALTFGIGSALAAASGIMWALRYPQLQPIM-GAIPGFKAFIAAVVGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + + + F I L ++L++ Sbjct: 239 GSIQGAVIGGLLLGFIEIMT-----------VAFFPDLAGYRDAFAFILLIGMLLIKPTG 287 Query: 339 LLRLRTP 345 ++ ++T Sbjct: 288 IMGVKTE 294 >gi|296159889|ref|ZP_06842710.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. Ch1-1] gi|295889872|gb|EFG69669.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. Ch1-1] Length = 305 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 90/305 (29%), Gaps = 17/305 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+++ G +G++++ IGAY+ + PV + Sbjct: 18 LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTIYMFSQLADNYWHGFAPVYFPL 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + L + +L W + + T Sbjct: 78 AICAAFALAFAAGWVAEWAL--IRHLYRRPLDTLLATWGLSLGMQQVFRSVFGPKEVSPT 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P + I +V+ ++ ++L L R+ R N++ + Sbjct: 136 LPDWLMGSWSPKPGLDIPINGLFVMSLAVVMTGGVLLALYRSRWGLRVRATVANRQMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AGA F A + + +V GG SL Sbjct: 196 AGIDTRKTDRLTFAIGCGMAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + ++ + +V+++R L Sbjct: 254 GTVASAFGIAQMQSISEFFM-------------TGSSARVVTLLTIVIVLMLRPQGLFAS 300 Query: 343 RTPSN 347 + Sbjct: 301 KVRRA 305 >gi|260459988|ref|ZP_05808241.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259034199|gb|EEW35457.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 328 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 112/328 (34%), Gaps = 28/328 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + ++ L + Y ++ LI+ +FA L G G+L + IG Sbjct: 9 LLIFAVCVVLAVLYPLFADGYQLTVIRDALIFGLFAASLDFFWGRTGILCFGHAAFFGIG 68 Query: 78 AYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 Y ++ +G + ++ V+ A + L RG Y I TL M I Sbjct: 69 GYIMALITLDDAIAFGSLLGIIGAVAGAAFVAAIIGYFLFFGGIRGSYFTIVTLAMGVIC 128 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 Q + W +T G +G+ + F + + + ++ Y + + + Sbjct: 129 QQAAVSWSSVTGGDSGLIGIPPIEFDVSGMH----------LDLSQDLPSYVFVSAIVAV 178 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + R I+DN+ +L L F +S+A G+AGA + Sbjct: 179 VVLALWSISRGRWGTILTAIQDNEVRAAALGHNAPLRLLVTFVLSAAIAGLAGALYVCMA 238 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ++PD+ + VI V +GG +L + + N + Sbjct: 239 GLVAPDLSGLLLSTEVIVWVAVGGRGTLLGPVLGAIFIQRAQQTISSFNPSLWP------ 292 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ +++ + +L Sbjct: 293 --------LLLGCVFVVIVFLLPDGILS 312 >gi|86360553|ref|YP_472441.1| branched chain amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284655|gb|ABC93714.1| probable branched-chain amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 329 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 123/310 (39%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +GL L I + Sbjct: 42 FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKSWGLPPELGILIGVA 101 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G++MG +++ +G Y A+ TL +S++F ++ + Sbjct: 102 GAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEG--------------ED 147 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MYY +L + + SII + ++IR+N++ Sbjct: 148 GIQSVPRGHLFGFIDLNDSTNMYYFVLAVFLVGISIIWRFINSPFGMILKSIRENEQRAI 207 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AGA + + + + VI + +LGG+ +L Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ + F T + I + +L+ ++ Sbjct: 268 IGPLFGAGLVVALENYLATSEFPV---------------TIITGIVFMVCVLIFRRGIIG 312 Query: 342 LRTPSNFLER 351 S + Sbjct: 313 EFYASRLGRK 322 >gi|107024511|ref|YP_622838.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|116688110|ref|YP_833733.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|105894700|gb|ABF77865.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia cenocepacia AU 1054] gi|116646199|gb|ABK06840.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia cenocepacia HI2424] Length = 320 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 29 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 88 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W ++ ++ ++ GA G+ + L++ + L+++ ++ G Sbjct: 89 YFGLPYWAMLVLAPVLVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 148 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 149 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 198 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 199 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 256 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 257 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 302 Query: 327 ALFLVILMRSHSLLR 341 + +V+L R L Sbjct: 303 IMAIVLLFRPAGLFG 317 >gi|222824111|ref|YP_002575685.1| branched-chain amino acid ABC transporter permease [Campylobacter lari RM2100] gi|222539333|gb|ACM64434.1| branched-chain amino acid ABC transporter, permease protein [Campylobacter lari RM2100] Length = 298 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 99/303 (32%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GAYS + + + + + Sbjct: 10 VINGFSLGSMYALIAIGYTMVYGVLRLINFAHGDIMMVGAYSALFCVTSMNVPFLGALSL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + A G+ + + K I+ LI + ++ + G Y Y Sbjct: 70 AMLFAAALGIAIDRVAYKPLRKAPRISLLITAIGISFLIQNVFNVLFGSTPKYFPVPSYL 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + I I F+ V+L + + ++ A R + + Sbjct: 130 ETVINFNNISISINNILVPILTFFILLVVLFILY----------KSKYGIAIRALAFDIH 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ SA + G F+A S + P M + +LGG+ Sbjct: 180 TVNLMGIDANRIIAIVFALGSALAAIGGIFWAVSYPSVEPSMGTLI-GLKAFGAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S++ I+ + + F I L L++L + Sbjct: 239 GSVAGAVLGGLIIGFTEVVVVAIFPDLSGFKDAFA-----------FIFLVLILLFKPTG 287 Query: 339 LLR 341 +L Sbjct: 288 ILG 290 >gi|317124777|ref|YP_004098889.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Intrasporangium calvum DSM 43043] gi|315588865|gb|ADU48162.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Intrasporangium calvum DSM 43043] Length = 307 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 96/306 (31%), Gaps = 12/306 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97 + + +Y + A G ++V G + L++ + IGA+ + + + L + Sbjct: 8 LVNGLTLGSLYALIAVGYTVVYGIVQLINFAHGEVFMIGAFGALATWTVLFQGTTALWVL 67 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ + ++ ++ + I I ++ Sbjct: 68 PVMILGAVVASVTTAVIMERIAYRPLRGAPRLAPLITAIGISVALQE--AVRLFYPGAKS 125 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + ++ V + + + + +A + ++ T + + + +++ Sbjct: 126 KIPFPRIDVVTGPALSFGGVTVQRAAVFTVGALLMSAALLWWFVNHTRTGHGMQAVSEDK 185 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + + + AFA+ + +AG + M F + + +LGG Sbjct: 186 DTARLMGVNVDRIIVIAFALGAFLAAIAGVAQGLLNANVDFRM-GFLAGLKAFTAAVLGG 244 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + ++ +L L G F + + L +V++ R Sbjct: 245 IGNIQGAVVGGLVLGVAEALAVGFIPGQFGG--------SAWKDVWAFVLLIVVLVFRPQ 296 Query: 338 SLLRLR 343 +L R Sbjct: 297 GILGAR 302 >gi|189351960|ref|YP_001947588.1| branched-chain amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|189335982|dbj|BAG45052.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 325 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 133/324 (41%), Gaps = 16/324 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+Y +LL L A Y + ++L + +FA ++++G GLLS + A Y Sbjct: 6 VLYGVLLAALLVAPFVGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 64 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + G + L + I+ G+++GL +++ +G Y A+ TL +++ I ++ Sbjct: 65 ATGYSMQTLGFTPELGVLAGTAIATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 124 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ + R F + ++ +YYV+L + + + I+ Sbjct: 125 A--------------PFTHGEDGLQGVPRGRLFGLLDLSNDLALYYVVLVVIVAACAFIV 170 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + I++N+ SL KL AF +S+ G+AG+ + Sbjct: 171 RIVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 230 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318 ++ + +V+ + ++GGM +L A+++ + + + + + + + + S Sbjct: 231 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 290 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 T + + +L ++ Sbjct: 291 SATIVTGLIFIACVLAFRRGIVGE 314 >gi|113867261|ref|YP_725750.1| ABC transporter permease [Ralstonia eutropha H16] gi|113526037|emb|CAJ92382.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 315 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 118/323 (36%), Gaps = 29/323 (8%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + +L ++ + I + G+ +++G G+++L Y IGA Sbjct: 6 AFILAGVLLWVAAGQLLSRHHVDLLNFAAILAVGGLGVGLLLGQCGIVNLAQASFYGIGA 65 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ + G IS A +G+P L+ G +LA+ATL + I + Sbjct: 66 YASAYCTTALGWPALAGAAAGLAISAALAAAIGVPVLRLGGFFLALATLAVGSIANVLFF 125 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W +T G GI +L + G + + R YY + + + ++ Sbjct: 126 EWDWLTGGTLGIGGIPKLSWFGYVLDTPER--------------YYYFVWPLLAVLLWLV 171 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + A R +RD A L + K S F +S+ +AG FA +S Sbjct: 172 DNLVKGRPGLAMRAMRDAAPAAQVLGVDMHRLKTSMFVLSAMLGSLAGTLFAHYVSFVSV 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F +I+ + + ++ G S + + V EL G+ + Sbjct: 232 QSFTVERSIVFLLVPVVAGARSTYGVILGALFVSLVPELLSGLGDF-------------- 277 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 H L L LV+ + + Sbjct: 278 -HQVLFGAVLVLVVTLMPGGMTG 299 >gi|317404589|gb|EFV84994.1| inner-membrane translocator [Achromobacter xylosoxidans C54] Length = 348 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 88/323 (27%), Gaps = 27/323 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86 + ++ + + + A G+ + G G+LSL I + +G Y + Sbjct: 25 PLALDPFRLNLVGKYMAFAFVAIGIVLTWGYSGVLSLGQGIFFGLGGYMMAMFLKLEASA 84 Query: 87 ----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE----IFQNILI 138 + + + + L + G + +L + ++ Sbjct: 85 PDLPDFMVWSSVDSLPVWWLPFHSLGWTLLLIVALPGLAAYLFSLAIFRKRVSGVYFAIV 144 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 I + + ++ +Y + L+ Sbjct: 145 TLALAMTLTVLIIGQQGDTGGANGITDFRTLLGWDIVGDDGKLALYLIEAAALTLAMLAA 204 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L + R+ + IRD + K F V++ + GAFF ISP Sbjct: 205 LAIVRSRLGKILIAIRDREDRVRFSGYDTAHVKACVFCVAAVLSSIGGAFFTLQVGLISP 264 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +I ++ +GG S+ ++ + +F Sbjct: 265 GAIGVVASIEMVIYAAVGGRLSIPGAVVGALLIGFLKSYLSE--------------TFPE 310 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + +V++ + L Sbjct: 311 IWLYFLGAIFIVVVVAMPNGLAG 333 >gi|186893584|ref|YP_001870696.1| branched-chain amino acid transporter permease subunit LivH [Yersinia pseudotuberculosis PB1/+] gi|186696610|gb|ACC87239.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+] Length = 308 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 101/308 (32%), Gaps = 21/308 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI----WL 94 + + Y + A G ++V G +G+++ Y I +Y I+ + + WL Sbjct: 12 MFNGITLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMVGIDTSWL 71 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 LI + ++S G + + + +++ I + + Sbjct: 72 LIGCAFLVSIVIASTYGWSIERVAYKPVRRSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 L L T +L F ++ ++ ++ V ++ L++R + + A R Sbjct: 132 ALPSLVTGQWTLGESNGFAATISTMQLTIWIVTFLA---MLALTLFIRYSRMGRACRACA 188 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++ K L F + + +AG I+P F + + + Sbjct: 189 EDLKMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAV 247 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 LGG+ S+ +L L + + F L +V+L+ Sbjct: 248 LGGIGSIPGAMIGGLVLGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLV 294 Query: 335 RSHSLLRL 342 +L Sbjct: 295 MPTGILGR 302 >gi|284050089|ref|ZP_06380299.1| inner-membrane translocator [Arthrospira platensis str. Paraca] Length = 387 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 86/324 (26%), Gaps = 28/324 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + L + A G+ ++ G GLLSL I +++G Y+ + Sbjct: 37 PLALPVFRLKLLGRFLSLCIVALGIDLIWGYTGLLSLGHGIFFSLGGYALAMYLQLQLPE 96 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + L+ I I Sbjct: 97 GQIPDFFMLYGVENLPWFWEPFYSFPFTLVAIFLIPGIVAAILGYLVFRNRIKGVYFSIL 156 Query: 152 VADRLYFLGTTVRSL--------------IRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 L F + ++ Y + + + L + Sbjct: 157 TQAALLVFFHLFNGQQKYINGTNGLKTDTTMIFGTQAGSPAAQLVFYELSILLMILIYLL 216 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 WL IRD++ K+ FA+S A G++GA + I+ Sbjct: 217 CRWLTSGRFGRLLVAIRDDENRVRFSGYDPTGFKVLVFAISGAIAGISGALYTVQSGIIT 276 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P + + +I ++ V +GG +L T ++ F Sbjct: 277 PSFMEVAFSIEMVIWVAVGGRATLVGAILGTVLVRLGQTFLSE--------------QFP 322 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 +V+ + ++ Sbjct: 323 QVWLFFQGALFLIVVTVLPSGIVG 346 >gi|116694035|ref|YP_728246.1| ABC transporter permease [Ralstonia eutropha H16] gi|113528534|emb|CAJ94881.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 378 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 103/342 (30%), Gaps = 36/342 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + ++ + L Y A GL ++ G G+LSL + + +G Y+ + Sbjct: 35 PLALDVFRLNLVGKYLSYAFVAVGLVMLWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASD 94 Query: 92 IWLLIPVSAMISGACGMIMG-----LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 S FR A+A ++ + ++ + Sbjct: 95 PRSTAIQSTPGIPDFMDWNQLSALPWWWEPFRHLPFAMAGVVAIPVLLAFVVSFAMFRRR 154 Query: 147 KAGIYVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 +G+Y A + L + + +Y+V + Sbjct: 155 VSGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLKTMLGWDIRTDSARLNLYFVNVA 214 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + F + ++ W++R+ + +RD + + K+ F +++A + GA F Sbjct: 215 LLFGAVALCRWIQRSKLGVLLLAMRDKEDRVRFSGYDVAMFKVFVFCLAAALSAIGGAMF 274 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP +I ++ +GG SL T ++ Sbjct: 275 TLQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLVGAVWGTLLVNAGKTY------------ 322 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 F SF LM V++ L L R Sbjct: 323 --FSESFPDLWLFLMAALFIGVVVAFPDGLAGLYRKYLARRR 362 >gi|121610150|ref|YP_997957.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121554790|gb|ABM58939.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 372 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 42/347 (12%), Positives = 91/347 (26%), Gaps = 32/347 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + L Y ++ +I+ Y + A + ++ G G+LSL + Sbjct: 28 LAVCALAPVLNLWLPAGSLLHLSDYTVALLGKIMCYAICALAMDLIWGYTGILSLGHGLF 87 Query: 74 YAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 +A+G Y + W +P +S + + L Sbjct: 88 FALGGYVMGMYLMRQIGRDGNYQSALPDFMVFLDWKALPWHWALSDSFAATLVLIVAVPG 147 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 + + A + + R F R + Sbjct: 148 LVAWVFGYFAFRSRIKGVYFSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGQPIA 207 Query: 179 YEIFMYYVLLGM---CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + + + L R+ + +RD + + KL+ + Sbjct: 208 TQNMRMLLFVLTGLTLLGFFVLARALVRSKFGLVLQAVRDAESRVMFSGYAPLPYKLTIW 267 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+ +AGA + I+P + +I + +GG +L I+ G Sbjct: 268 TISAMMCAVAGALYVPQVGIINPGEMSPANSIEIAIWAAVGGRATLIGPIIGAFIVNGAK 327 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + V L ++ L Sbjct: 328 SWLT--------------VAAPEFWLYFLGALFIAVTLFLPGGVMGL 360 >gi|190895540|ref|YP_001985832.1| branched-chain amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190699485|gb|ACE93569.1| probable branched-chain amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 329 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 122/310 (39%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +GL L I + Sbjct: 42 FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKSWGLPPELGILIGVA 101 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G++MG +++ +G Y A+ TL +S++F ++ + Sbjct: 102 GAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEG--------------ED 147 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MYY +L + + II + ++IR+N++ Sbjct: 148 GIQSVPRGHLFGFIDLNSSTNMYYFVLAVFLVGILIIWRFINSPFGMILKSIRENEQRAI 207 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AGA + + + + VI + +LGG+ +L Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ + F T + I + +L+ ++ Sbjct: 268 IGPLFGAGLVVALENYLATSEFPV---------------TIITGIVFMVCVLIFRRGIIG 312 Query: 342 LRTPSNFLER 351 S + Sbjct: 313 EFYASRLGRK 322 >gi|300864177|ref|ZP_07109065.1| permease protein of branched-chain amino acid ABC transporter [Oscillatoria sp. PCC 6506] gi|300337821|emb|CBN54211.1| permease protein of branched-chain amino acid ABC transporter [Oscillatoria sp. PCC 6506] Length = 316 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 95/319 (29%), Gaps = 31/319 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + +Y +FA G ++V LG+++ + +GAY L Sbjct: 10 FLNGLSIGSVYAIFALGYTLVFSILGIINFAHGAVFTLGAYFTYTLMGGTFGFNGLLANA 69 Query: 92 -------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + + + + ++G G+ + + + + L + + I Sbjct: 70 KGPVQLPFFGALIIGSTLAGLVGVTIERIAFRPLRQRQSDPLLTVVSSLGVAVAIANIIQ 129 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G F + + + A + + T Sbjct: 130 YLVGAEIYTFPANTYGN--LPAAINFGTLDKPIPIRTVQVVIFGVSIVIVAILTYLINFT 187 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A + + ++ L + F VSS G+AG +S I+ F Sbjct: 188 KFGKAMQAVAEDDITASLLGIDTDRYIVLTFFVSSFLAGLAGTLVGSSV-SIAGPYFGIV 246 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + +++++LGG+ S+ ++ V F+ Sbjct: 247 FGLKGLAVIVLGGLGSIPGAVLGGFVIGLVEAFV--------------PADFSAYKDAAA 292 Query: 325 VIALFLVILMRSHSLLRLR 343 LF+++L+R LL R Sbjct: 293 FAILFVMLLVRPQGLLGRR 311 >gi|257784339|ref|YP_003179556.1| inner-membrane translocator [Atopobium parvulum DSM 20469] gi|257472846|gb|ACV50965.1| inner-membrane translocator [Atopobium parvulum DSM 20469] Length = 290 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 94/289 (32%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + LL+ G+Y I + GL+ + + + Sbjct: 6 VLNGLQLGSIYALVALGYTMVYGIILLLNFAHGDIIMFGSYVAWIALVQLGLNPAIAVLL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G+++ + + ++ LI + +L + G Sbjct: 66 AIFGCVVLGVLIDKVAYAPLREAPRLSILITAIGVSYLLENGVQLLLGADAKV------- 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + ++I + + ++ + +++T + A R + ++ Sbjct: 119 ----IPNIIDLGTVQVFGSTLSGTALLTVAVTTLATVALTVLVQKTRLGKAMRAVSEDMG 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FAV SA G+A ++ + ++SP M +LGG+ Sbjct: 175 AARLMGVNVNSTISFTFAVGSALAGIAAILYSMAYQQVSPTM-GVMLGTKAFVAAVLGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ I+ + + F + + Sbjct: 234 GSIPGAVIGGLIVGFSEVFVAAFGLSVWQDAVVFLLLILVLVVKPTGLL 282 >gi|307132622|ref|YP_003884638.1| branched-chain amino-acid ABC transporter permease [Dickeya dadantii 3937] gi|306530151|gb|ADN00082.1| branched-chain amino-acid ABC transporter permease [Dickeya dadantii 3937] Length = 299 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 102/303 (33%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GA+ ++ + GL + + Sbjct: 10 VVNGMSLGSMYALIAIGYTMVYGVLRLINFAHADIMMVGAFMALLGFTSLGLPFGAAVIL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+ G+ + + + I+ LI + L + G + Y +F Sbjct: 70 AILIAALLGIGIDQIAYRPLRQASKISMLITAIGVSFFLENLFNVVFGGSPRYFESPPFF 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + V L L A I+ L RT A R + + Sbjct: 130 NQI----------INLGPIVVTNVAWIVPLMTLALLAVILCILYRTRQGMAIRAVAFDVN 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ SA + G F+A S I P M + + +LGG+ Sbjct: 180 TVRLMGIDANQIIAFVFALGSALAALGGVFYAISYPSIDPLM-GVLIGLKAFAAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S++ IL + + F F L LV+L R Sbjct: 239 GSVTGAVIGGFILGFTEVVAVALFPELGGYKDAFAFMF-----------LILVLLFRPVG 287 Query: 339 LLR 341 ++ Sbjct: 288 IMG 290 >gi|303247752|ref|ZP_07334021.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] gi|302490836|gb|EFL50735.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] Length = 294 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 100/311 (32%), Gaps = 31/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A GL+++ G + +++ +G +S L G+ +L + + Sbjct: 8 IINGLMMGAMYGLTALGLTLIFGVMKVINFAHGSLLMVGMFSAYWLIKLTGIHPYLALII 67 Query: 99 SAMISGACGMIMGLPSLKF-----RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 I G + +K R +I++ +L + G Sbjct: 68 VPPILYFFGYYLQDVVIKPVFKSEREVREPATVIIVTTGVWYVLDNLALMCFGAE----- 122 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 TVR+ I I I + + + + L++R+T I A R Sbjct: 123 ------YRTVRTAISNKSMALGPYIVSIPKFSGFVVAILTAVGLALFMRKTKIGMALRAT 176 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +++A + AF + +A G+AG +I IV Sbjct: 177 ALDREAANLMGIDQYKVYNIAFGLGTAIAGIAGCVLIPFYYV--YPSVGVVFDIRAFIIV 234 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ S+ ++ V + + ++ +++ Sbjct: 235 VLGGLGSIPGALLGGLVIGLVESVFSQFMASTWTEA-------------IIYAIFLIILF 281 Query: 334 MRSHSLLRLRT 344 ++ + Sbjct: 282 VKPSGFFGNKQ 292 >gi|312880168|ref|ZP_07739968.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Aminomonas paucivorans DSM 12260] gi|310783459|gb|EFQ23857.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Aminomonas paucivorans DSM 12260] Length = 287 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 99/305 (32%), Gaps = 25/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + GL++V G L +L + Y GAY + S+ L + Sbjct: 8 ILNGIAIGSIYALTTLGLALVYGILKILHVAHASVYTAGAYV-GLYLFGVTESLTLAVLG 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S G+ + + LI S L + + G Sbjct: 67 SMAFCALLGVAIERFVYFPLLKFPPYVPLISSIAIFLGLEEVCRLVAGPE---------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + F F ++ + V + + + +T A R + + Sbjct: 117 -ILTFPVKLPFPSFHVGHLLISSTLTAVYVITAAVLGILWFLSTKTEFGLAMRATSQDME 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 SL + + F + SA +AG +++ P M ++++++GGM Sbjct: 176 TASSLGVNSHWVVSATFMIGSATAAIAGILVGIYYNQVYPTM-GAVPAYKTLALIVVGGM 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A+ +L L G M L IA+ +V+L R Sbjct: 235 GSVPGAVLASLLLGVGETLLIGYA------------DIPMPRDALAFIAMIVVLLWRPQG 282 Query: 339 LLRLR 343 LL R Sbjct: 283 LLGKR 287 >gi|332528991|ref|ZP_08404957.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332041541|gb|EGI77901.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 321 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 121/325 (37%), Gaps = 26/325 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 L + ++ QILI+ +FA L + +G G+L++ + GAY+ +L Sbjct: 20 LLLGSSFFLAPDHLTLLSQILIFGLFAVSLDMALGYAGILTVGHAAFFGAGAYAAGLLAR 79 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + + + ++G G ++ ++ + T+ + + ++ + IT G Sbjct: 80 HGWGEPFTGLLTALAVAGTLGYVLSYMVVRGADLTRLMITIGVCVLLYELVNRLSGITGG 139 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G+ + F ++ + M L ++ + R+ Sbjct: 140 TDGLQGM------------TVWPVAGLFEFDLFGKTAFVYAYAMVLLMFLLVRRVLRSPF 187 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A R I DN++ ++ + + A+A S+A G+AGA A + + + F+ + Sbjct: 188 GLALRGIHDNRRRMLAIGSPVESRLRMAYAFSAAIAGVAGALLAQTTQFVGIESISFNRS 247 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 ++ I++LGG L + + V + +N + + Sbjct: 248 AEILIILVLGGTGRLYGGLIGAIVYMLVHDGFADLN--------------PEYWMFWLGL 293 Query: 327 ALFLVILMRSHSLLRLRTPSNFLER 351 L V+++ ++ L + ++ Sbjct: 294 FLITVVMVGRGGIMGLLSRLVRIKE 318 >gi|298528275|ref|ZP_07015679.1| inner-membrane translocator [Desulfonatronospira thiodismutans ASO3-1] gi|298511927|gb|EFI35829.1| inner-membrane translocator [Desulfonatronospira thiodismutans ASO3-1] Length = 301 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 98/305 (32%), Gaps = 16/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ + IGAY + + + ++ +L + Sbjct: 8 LINGLAVGGIYALIALGYTMVYGVMRLINFAHGDLFTIGAYLGLTVLTSVAVTAYLGPFL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ M M + + ++ + + + + Sbjct: 68 GVILLMMIIMCMVGVVGVVLERVAYRPVRQADRL--SAVVSALGASIFLSNLVMLIWGPR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + + VLL L + ++++T A R + + Sbjct: 126 FRVYPDDILPRITLNILGLDVPLMRILVLLASLILMGILYYFVQKTKTGTAIRAVAIDHG 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + A G AG +I+ M ++ + +LGG+ Sbjct: 186 ASRLMGINVNRIISLVFLIGPALGGAAGVMVGLYYGQINFTM-GWAFGLKAFIAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + L + + F I L L+++ R Sbjct: 245 GNIPGAMIGGLLLGVIEALGAAFISTAWKDGIAF-------------IVLILILIFRPTG 291 Query: 339 LLRLR 343 +L R Sbjct: 292 ILGER 296 >gi|218531620|ref|YP_002422436.1| urea ABC transporter permease UrtB [Methylobacterium chloromethanicum CM4] gi|218523923|gb|ACK84508.1| urea ABC transporter, permease protein UrtB [Methylobacterium chloromethanicum CM4] Length = 308 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + + + + L + Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQTYLPSLFGAYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + L + +L W + +G Sbjct: 82 AMALAFLASRAMGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRTIFGPREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + S + + + +I +V+ ++ + + + R+ R + N+ + Sbjct: 140 LPSWMMGSIPVTDSIEVQINGLFVIAVTAVITVGVAVLMYRSRFGAQIRAVMSNRPMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + G+AG+ F + + IV+ GG SL Sbjct: 200 VGIDTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ ++++R L L Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VLTLLAVVGILMLRPQGLFTL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|323700717|ref|ZP_08112629.1| inner-membrane translocator [Desulfovibrio sp. ND132] gi|323460649|gb|EGB16514.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132] Length = 300 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 93/288 (32%), Gaps = 4/288 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A G ++V G + L++ Y IGA++ +I+ + + Sbjct: 8 FMGGLTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTGLIVAGLLTMLGFPG--P 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ ++ + F + +A L + LI ++ + + Sbjct: 66 AILVIAIVCAVIWAAAYGFTIEKMAYKPLRNAPRLSP-LISAIGMSIFLQNYVMLAQTSD 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F + ++L + L+++ T + A R N+K Sbjct: 125 FLPFPELIPHFGFMKKLGTVMSSAELVIILATVASCVGLTLFIKFTKLGKAMRATAQNRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + F + S+ + G A+ +I+ F I + +LGG+ Sbjct: 185 MAMLVGINVDMVISATFIIGSSLAAVGGVLIASHIGQINYY-IGFIAGIKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 SL +L G + + F + I Sbjct: 244 GSLPGAMLGGLVLGLTEAFATGYVSSDYEDVFAFLLLVLILIFRPSGI 291 >gi|295677099|ref|YP_003605623.1| inner-membrane translocator [Burkholderia sp. CCGE1002] gi|295436942|gb|ADG16112.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 428 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 105/326 (32%), Gaps = 27/326 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + ++ ++ + Q ++FA ++++G GLLS Sbjct: 13 ALAPWLALVIFLAVPPFIWPHSWLLAYLAQSATMIVFALSYNLLLGETGLLSFGHAAFAG 72 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GA + + G+ + LL V + CG++ G + + G A+ TL + E+ Sbjct: 73 LGALIAARVFNAGGVPLVLLPVVGGIGGALCGVLFGFIATRRAGTAFAMITLGLGELVVA 132 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 G+AG+ + Y ++ C +++ Sbjct: 133 AAWTLPGWFGGEAGVAI------------DRASGPLLGGWSFGPAREAYALIALWCVVAS 180 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L RT +RDN ++ + +S+ F G+AG + + Sbjct: 181 VAMFALSRTPFMRLANAVRDNPARAAAIGCYPRRVRYGVVVLSAFFAGIAGTLGLINIEL 240 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +S + + V+ ++GG + ++ + + + Sbjct: 241 VSTESVGMMRSGAVLIATVIGGTAAFFGPVAGAIVITFFSVVVASVTRAW---------- 290 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + +V++ L Sbjct: 291 -----LFYLGLFFVVVVMAAPDGLAG 311 >gi|302868842|ref|YP_003837479.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029] gi|302571701|gb|ADL47903.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029] Length = 316 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 88/306 (28%), Gaps = 20/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY------GLSIWLLI 96 Q IY + A G ++V G L L++ + GA++ + + + +S I Sbjct: 18 LTQGAIYALVALGYTLVYGVLRLINFAHSEVFIAGAFAAIWTWNGFGLDQNSQVSGIGSI 77 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +++ I + + LI + + + Sbjct: 78 LFYLLVAMIVAAIASAGTATVIERVAYRPLRKRNAPPLAFLITAIGASIAISEAFGVYTR 137 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 R + F + V + + + ++ ++ R+ R + + Sbjct: 138 RLPEGAPRLVSSEPLFHIAGVPIDAVQLLTIGSALVMMFALDQFINRSRTGRGIRAVAQD 197 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L F G+AG + ++ F + + +LG Sbjct: 198 ANTAALMGVNKDRIILMVFIAGGTMAGVAGLLYDVRIQTLTY-SVGFLLGLKAFTAAVLG 256 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +L +L V G+ + F L ++++ R Sbjct: 257 GIGNLRGALVGGLLLGVVENYASGLFGSQWKDFAAF-------------AVLVVLLMFRP 303 Query: 337 HSLLRL 342 LL Sbjct: 304 TGLLGE 309 >gi|238755233|ref|ZP_04616578.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia ruckeri ATCC 29473] gi|238706574|gb|EEP98946.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia ruckeri ATCC 29473] Length = 308 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMIGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGSAFVVAIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWTLAESNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L V+L+ Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIAVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|218284074|ref|ZP_03489902.1| hypothetical protein EUBIFOR_02506 [Eubacterium biforme DSM 3989] gi|218215396|gb|EEC88934.1| hypothetical protein EUBIFOR_02506 [Eubacterium biforme DSM 3989] Length = 552 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 90/334 (26%), Gaps = 24/334 (7%) Query: 10 KYDKILCLLAVVYPLLLFLFL----GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 K + ++ V L + + + I S+ Q + A G+S ++ G Sbjct: 224 KNGLYIAIILVFIFLCIITPIKKNGLQLFTVNNILSIMQQASPRMFLALGVSGLIMLAG- 282 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L+ +G + I+ + + V + G + L + Sbjct: 283 TDLSVGRMVGMGMTAATIIMHNGPNTGSVFGHVFDFSTMPVGGRILLALVVCVVLCTMFT 342 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 T+ F I+ + + + + V P + + Sbjct: 343 TIA--GFFAAKFKMHPFISTMANMLVIFGLVTYSTKGVSFGGIDQSIPGKIIPKVGGIPT 400 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++L + +T + N +A ++ L AF ++ G Sbjct: 401 IILWAVAAVVIVWFIWNKTKFGKNLYAVGGNPEAASVSGISVFKVTLGAFIMAGILYGFG 460 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCC 299 + + I+ ++ GG+ +S + I + Sbjct: 461 SWLECIRMIGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVLIFTALTYSLT 520 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 + N++ +I L V L Sbjct: 521 IL-----------GIDTNLQFVFSGIIILIAVTL 543 >gi|332524766|ref|ZP_08400963.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] gi|332108072|gb|EGJ09296.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] Length = 319 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 122/296 (41%), Gaps = 14/296 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++ L + +FA ++++G GLLS +A AYS L G S + I + Sbjct: 30 FVMKALCFAIFACAFNLLLGYTGLLSFGHAAYFAAAAYSTGWLVRSAGWSPEMGIVAGTL 89 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 I+ A G+++GL +++ +G Y A+ TL ++++ + ++ T G+ G+ R Sbjct: 90 IAAAVGLVVGLIAIRRQGIYFAMVTLALAQMVYFVFLQAP-FTGGEDGLQGVPRGT---- 144 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + + MYYV+L + + I+ + + + IR+N+ Sbjct: 145 ---------LFGVLPLADDRVMYYVVLAVFVAVFAAIIRIVHSPFGQVLKAIRENEPRAV 195 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +S+A G+AGA + +S + V+ + +LGGM + Sbjct: 196 SLGYAVDRYKLLAFVLSTAIAGLAGALKTLVLGFATLSDAHWSLSGEVVLMTLLGGMGTF 255 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + +IG+ + ++ + + L + R Sbjct: 256 AGPVIGAFTIIGLQNFLADRVGSWVTVIIGAIFVACVVAFRRGFVGEALAWMQRRK 311 >gi|222149579|ref|YP_002550536.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221736561|gb|ACM37524.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 300 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 94/304 (30%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +G ++ +I+ + Sbjct: 8 LINGLTLGSIYGLVAIGYTMVYGIVGMINFAHGDIFMLGGFAALIVFLLLTTFFAGIPVA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A++ ++ + + +A L S ++ I VA Sbjct: 68 LALLIMLVVSMLMTGLWNWTIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQVAQGP-- 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + ++ L A+ + +T + A R ++K Sbjct: 126 -RNKPIPALVNDVYHFGAITVSLKQMIIVAVTAVLLAAFWYIVNKTPLGRAQRATEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + S F + + +LGG+ Sbjct: 185 MAALLGVDVDRTISVTFVMGAALAAVAGTMYLMYYGVASFTD-GFIPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L V++ + Sbjct: 244 GSLPGAVLGGLLIGLIESLWSAYFTIAYKDVATFG-------------ILAFVLIFKPTG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|212702036|ref|ZP_03310164.1| hypothetical protein DESPIG_00038 [Desulfovibrio piger ATCC 29098] gi|212674551|gb|EEB35034.1| hypothetical protein DESPIG_00038 [Desulfovibrio piger ATCC 29098] Length = 302 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 89/285 (31%), Gaps = 4/285 (1%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY + A G ++V G + L++ Y +GA++ +++ G+ + + + Sbjct: 14 LTRGSIYALIALGYTLVYGIIELINFAHGEIYMLGAFTALLVAGVLGIVGFPAGGILIVA 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + + LI ++ + + Sbjct: 74 ALAAVVWSAAYGYTLEKVAYKPLRGA---PRLSPLISAIGMSIFLQNYVLLAQTSDYVPF 130 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 R L I + +L+ S+ L++R T + A R N+K Sbjct: 131 PRLLPDMEFLDYLGNIMGPSDFLILVTSTLAMVSLSLFIRYTRMGKAMRATAQNRKMALL 190 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L F V SA + G A+ +++ F + + +LGG+ S+ Sbjct: 191 LGINADRIISLTFIVGSALAALGGVLIASHMGQVNF-GIGFLAGLKAFTAAVLGGIGSIP 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 +L + G + L F + I Sbjct: 250 GAMVGGLVLGIAESMTTGYLSGNYEDALAFALLILILIFRPDGIL 294 >gi|163858227|ref|YP_001632525.1| putative permease component of branched-chain amino acid transport system [Bordetella petrii DSM 12804] gi|163261955|emb|CAP44257.1| putative permease component of branched-chain amino acid transport system [Bordetella petrii] Length = 426 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 116/329 (35%), Gaps = 34/329 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L L L + + + IQ+LI +FA +++ G G+LS + +G Sbjct: 5 LIACLAGALVLAALPFLLSQGLLNAAIQMLIAALFASAYNLLCGQAGMLSFGHAAYFGVG 64 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIM----GLPSLKFRGDYLAIATLIMSEIF 133 A++ V + G + L P+ + G++ G + + G Y A+ TL ++E+ Sbjct: 65 AFATVHAMNAVGGAGLLPTPLMPLAGAVGGLVFGGIAGWFATQRSGTYFAMITLAIAELV 124 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 ++ K I G+AGI + + +YY+ L Sbjct: 125 HSLAPHLKGIFGGEAGISTMRMPAWGFDFGSTTQ---------------VYYLTLAWVLA 169 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + +++ RT + +R+N L + FA+S+ F GMAG S Sbjct: 170 AMTLLFLYTRTPLGRLTLGLRENSHRLKFLGYNVHGLSTLVFAISAMFSGMAGGLQVLSN 229 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + + +F S + + +GG+ A A++ + + Sbjct: 230 ESANYVVFDASLSAAAVLNAYIGGVQVFLGPAFGAALMTFFGYAISDLTRSW-------- 281 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 I LV++ L L Sbjct: 282 -------LLYQGILFVLVMMFLPTGLTGL 303 >gi|91778398|ref|YP_553606.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691058|gb|ABE34256.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia xenovorans LB400] Length = 305 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 90/305 (29%), Gaps = 17/305 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+++ G +G++++ IGAY+ + P+ + Sbjct: 18 LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTIYMFSQLADNYWHGFAPLYFPL 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + L + +L W + + T Sbjct: 78 AICAAFALAFAAGWVAEWAL--IRHLYRRPLDTLLATWGLSLGMQQVFRSVFGPKEVSPT 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P + I +V+ ++ ++L L R+ R N++ + Sbjct: 136 LPDWLMGSWSPKPGLDIPINGLFVMSLAVVMTGGVLLALYRSRWGLRVRATVANRQMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AGA F A + + +V GG SL Sbjct: 196 AGIDTRKTDRLTFAIGCGMAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + ++ + +V+++R L Sbjct: 254 GTVASAFGIAQMQSISEFFM-------------TGSSARVVTLLTIVIVLMLRPQGLFAS 300 Query: 343 RTPSN 347 + Sbjct: 301 KVRRA 305 >gi|163782934|ref|ZP_02177929.1| inner-membrane translocator [Hydrogenivirga sp. 128-5-R1-1] gi|159881614|gb|EDP75123.1| inner-membrane translocator [Hydrogenivirga sp. 128-5-R1-1] Length = 306 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 108/317 (34%), Gaps = 35/317 (11%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 G + Y+ + L+ A ++++G G + + + +G+Y+ +L Sbjct: 24 VAGDSLPSGYLLRVFSSALMLTSLALSQNVLLGYTGYPAFGGIAFFGVGSYAAGVLSKSL 83 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 G+ +L IP+ ++S + + ++ R Y AIATL + ++ + Sbjct: 84 GMPFYLSIPLGGIVSALIALAVAPVLMRLRSHYFAIATLALQLALAEMVANLEFTGGSYG 143 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 R V+ + Y + L + + +++ R+ Sbjct: 144 INLPIYR--------------------GVMEDYVFYLLFLFLTAGLFFLNVYIDRSVFGY 183 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENI 267 A + IR+++ A +L + K +F + + G+AG +A I P F ++ Sbjct: 184 ALKAIREDELAAETLGVNTLVFKSVSFTLMALTTGLAGGVYAYWITYIDPPSVFDPLLSV 243 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++LGG+ S L V E+ +L + Sbjct: 244 KTFVALLLGGVGSTVGPVLGAFFLELVSEVVWSRLLELHGVVLGALIVLVVLLL------ 297 Query: 328 LFLVILMRSHSLLRLRT 344 ++ +R Sbjct: 298 --------PRGIVGVRR 306 >gi|90422357|ref|YP_530727.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90104371|gb|ABD86408.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 345 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 130/334 (38%), Gaps = 27/334 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + V L+F +G + ++ +G + LI+ A + I++G GLLSL + + Sbjct: 31 VLVALFVVAALIFAAVGVLQDDRFFLRLGTEALIFAGLALSVDILLGYSGLLSLGQALYF 90 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY + + S W + + ++S G + GL + + RG Y A+ T ++++ Sbjct: 91 GLGAYVSAV-VLKEVPSFWAAMAAALLVSLVIGFLAGLIANRVRGVYFALVTFGLAQVAA 149 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + V + + + LG L Sbjct: 150 RAVYNTRSL-----------GASDGLIGVPVVPIDLGVFTVMSNSPAGFFLFTLGFIVLL 198 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ +L T +R N++ SL + +LSA+ +++ ++GA + R Sbjct: 199 YAVCAYLLDTPFGRVLLALRANERRVPSLGYSTRNLRLSAYVLAAVIASLSGALYPMLRG 258 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP++ F+ + + V++GG+ +L+ IL + + + + Sbjct: 259 FVSPELLFFTTSGNAVITVVIGGVGTLAGALYGGVILTVLKSVIGSLTEH---------- 308 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 H ++ + ++ L+ + P Sbjct: 309 -----HLIVIGLLFMATVIFLPKGLMGVVRPLVE 337 >gi|206575778|ref|YP_002237858.1| hydrophobic amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288934787|ref|YP_003438846.1| inner-membrane translocator [Klebsiella variicola At-22] gi|290508912|ref|ZP_06548283.1| branched-chain amino acid transport system permease [Klebsiella sp. 1_1_55] gi|206564836|gb|ACI06612.1| hydrophobic amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288889496|gb|ADC57814.1| inner-membrane translocator [Klebsiella variicola At-22] gi|289778306|gb|EFD86303.1| branched-chain amino acid transport system permease [Klebsiella sp. 1_1_55] Length = 304 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 85/304 (27%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y + AY I + P+ Sbjct: 9 LINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMVSAYLCAIGLALLSFFGIHSFPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ + + I + Sbjct: 69 LIFATLVFTIVVTGVYGWAIERIAYRPLRNSTRLAPLISAIGMSLILQNYVQLSQGPNQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ S V ++L+ ++ ++ T + R + +++ Sbjct: 129 GIPTLLSGALRMTVGDGVVQITWTKVFILVAALVGMLTLTWIIQYTRLGRICRATQQDRR 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A G+AG + F I + +LGG+ Sbjct: 189 MAAILGINTDRVISLVFVIGAAMAGLAGVLVTMNYGTFDFY-IGFIIGIKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L G+ + + F L +++ R Sbjct: 248 GSLPGAMLGGLLLGVAEAQFAGLVNSDYKDVFSF-------------ALLVAILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|256379542|ref|YP_003103202.1| inner-membrane translocator [Actinosynnema mirum DSM 43827] gi|255923845|gb|ACU39356.1| inner-membrane translocator [Actinosynnema mirum DSM 43827] Length = 320 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 94/311 (30%), Gaps = 25/311 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-----------YGLS 91 + IY + A G ++V G L L++ + IG + ++ + Sbjct: 17 LVIGSIYALVALGYTMVYGVLRLINFAHSEIFMIGTMASLVTITAIAPATPLTGVALIGV 76 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + LLI VS +SG +++ + + A + L + Sbjct: 77 MVLLILVSGAVSGGAAVLLEFVAYRPLRRKGATRLTALISAIGASLFLQELFALVVIPWL 136 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + R + R F V++ + ++ + +T I R Sbjct: 137 TGKPGRNQQSAARVVDRETLFTIGNADVRTDHVIVIVAAVVMMVALDRLVNQTKIGRGIR 196 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 + +A + I F + G+AGA + + + F I + Sbjct: 197 ATAQDPEAAVLMGVNIDTIVRITFLLGGTMAGVAGALYLMEYEN-TVYNVGFVLGIKAFT 255 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +LGG+ +L L + + ++ F L +V Sbjct: 256 AAVLGGIGNLRGALLGGITLGLIENWGAIFLGSEWKDVIAFT-------------VLVIV 302 Query: 332 ILMRSHSLLRL 342 ++ R +L Sbjct: 303 LMFRPTGILGE 313 >gi|78355658|ref|YP_387107.1| high-affinity branched-chain amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218063|gb|ABB37412.1| L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 302 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 88/288 (30%), Gaps = 4/288 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A G ++V G + L++ Y IGA++ +I G+ + L+ + Sbjct: 10 FLGGLTRGSIYALIAIGYTMVYGIIELINFAHGEIYMIGAFTGLITAGVLGIYGFPLLAI 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+ + M LI ++ + + Sbjct: 70 LAVAVVVAIIYSAAYGYTLEKIAYKPLRGSMRLAP---LISAIGMSLFLQNYVILAQTSD 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F I+ ++ F A + L+++ T + A R N+K Sbjct: 127 FLPFPALVPDFAFMEPIAHIFASSDLLIVATSAFSMAGLTLFIKYTRMGKAMRATAQNRK 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + S+ + G A+ ++S ++ F I + +LGG+ Sbjct: 187 MAMLLGIDADRIISITFIIGSSLAALGGVLIASHVGQVSFNV-GFLAGIKAFTAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 S+ L G + + F I Sbjct: 246 GSIPGAMAGGLFLGLSESYATGYISSDYEDVFAFLLLVLFLIFRPSGI 293 >gi|330813765|ref|YP_004358004.1| branched-chain amino acid transport system permease protein LivM [Candidatus Pelagibacter sp. IMCC9063] gi|327486860|gb|AEA81265.1| branched-chain amino acid transport system permease protein LivM [Candidatus Pelagibacter sp. IMCC9063] Length = 355 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 100/338 (29%), Gaps = 32/338 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + +L F + Y L+ ++ A +I G +G + ++ + +G Sbjct: 10 LFIYLGVLAFALIAPNVFSDYRIQ-FTFWLVLIILAITWNIQGGEMGYNTFGNIMFFGVG 68 Query: 78 AYSY-----------VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 Y G ++ P G++ + Sbjct: 69 MYVCSGIQIGLFFDLAEWTVSGGEKTFIHTPDQYFQGLWIGLLAAAIIPAIIALIIGYGV 128 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L + + I +G + + + F YY+ Sbjct: 129 LGLRGHYFAIC---TLGIGIASGEIAGGIELIGAGQGMTAPPWPKDIGGTEYRNEFFYYL 185 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 L + ++ I WL T IRDN+ ++ + K++ + +S+ F+G+AG Sbjct: 186 TLALFVMTFVFIKWLYSTRFRLVLNAIRDNEDKAEAMGIETMRYKITGWVISAFFVGLAG 245 Query: 247 AF---FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 + + + ++ + ILGG +L ++ E Sbjct: 246 GLVGNIVGYIEPVEVAFDGREMGVFMVLMCILGGKGTLWGPVIGASVFHIFKE------- 298 Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F F + + + ++++ ++ Sbjct: 299 -------SFWSFFLGWQYVALGVLIIVIVVYLPEGIMG 329 >gi|251791614|ref|YP_003006335.1| branched-chain amino acid transporter permease subunit LivH [Dickeya zeae Ech1591] gi|247540235|gb|ACT08856.1| inner-membrane translocator [Dickeya zeae Ech1591] Length = 308 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 ++ +++ + I I + R Sbjct: 72 LISVAFIAAVVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGSRDV 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVHGQWVLGESNGFAATLSSMQLTIWVVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L + F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGISTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + ++ F L V+L+ Sbjct: 251 IGSIPGAMIGGLILGIAESLTSAYLSTEYKDVVSF-------------ALLIGVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|325293777|ref|YP_004279641.1| branched chain amino acid ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325061630|gb|ADY65321.1| branched chain amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 300 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 102/313 (32%), Gaps = 35/313 (11%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI------ 92 + + IY + A G ++V G +G+++ + +G ++ +I+ Sbjct: 8 LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLIATSFFAGIPVA 67 Query: 93 ---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L++ V+ +++G ++ + + +A LI + L + +T G Sbjct: 68 LLLILMMVVAMLMTGLWNWVIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + + + + + ++ L + + +T + A Sbjct: 128 KPIPSMVT------------ESYHFGSITVSLKQFIIMAVTSVLLFAFWYIVNKTPLGRA 175 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + +A +AG + S + F + Sbjct: 176 QRATEQDRKMAALLGVDVDKTISITFIMGAALAAVAGTMYLMYYGVASFND-GFIPGVKA 234 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 235 FTAAVLGGIGSLPGAVLGGLLIGLIESLWSAYFSIAYKDVAAFG-------------ILA 281 Query: 330 LVILMRSHSLLRL 342 V++ + +L Sbjct: 282 FVLIFKPTGILGR 294 >gi|57242113|ref|ZP_00370053.1| branched chain amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] gi|315638171|ref|ZP_07893353.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] gi|57017305|gb|EAL54086.1| branched chain amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] gi|315481707|gb|EFU72329.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] Length = 298 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 94/303 (31%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ + AY+ + + + + + Sbjct: 10 LVNGFSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVSAYAALFCITSLNVPFLGALSL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+ + K I+ LI + L + YF Sbjct: 70 AMIFAMVVGIATDKIAYKPLRKAPRISLLITAIGISFFLQNLFNMLFTSTPKAFLPPAYF 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V V L + ++L L ++ A R + + + Sbjct: 130 EEL----------INMGGVSVTFGSLLVPLITFIIVVIVLLILYKSKYGIAIRALAFDVQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ SA + G F+A+ I+P M + + +LGG+ Sbjct: 180 TVNLMGIDANRIIAMVFALGSALAAVGGVFWASMYYSITPTMGTLI-GLKAFAAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + F + I L ++L + Sbjct: 239 GSVVGAVIGGLIIGLTEVI-----------AVAFFPELSGFKDAFAFIFLVFILLFKPTG 287 Query: 339 LLR 341 +L Sbjct: 288 ILG 290 >gi|238763652|ref|ZP_04624612.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia kristensenii ATCC 33638] gi|238698130|gb|EEP90887.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia kristensenii ATCC 33638] Length = 308 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y I +Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMVGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGSAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLNQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|158423735|ref|YP_001525027.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158330624|dbj|BAF88109.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 323 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 113/330 (34%), Gaps = 29/330 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L ++ ++L L + + + +LI + A G +++ G G S + Sbjct: 4 GILPLLALVVLIAALPLVTASNTAINFVVFVLIIALGAQGWNLLGGVGGQFSFGHAAFFG 63 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIF 133 GAY +L +R+G++ W+ + G ++G S + RG Y A+ TL +E+ Sbjct: 64 TGAYVSAVLQARFGVNAWVAFAAGVAMGALVGWVIGFLSFRAGLRGSYFALVTLAFAEVL 123 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + G L + ++ L + Sbjct: 124 RILANAL---------------PITGGGAGLLLKLDLGLGNFQFSSRAVFLWIALALVAA 168 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + W+ + +R+N+ A +L ++ KL A +S A AGAF+ Sbjct: 169 GLLLCRWIADSRFGAQLVAVRENEDAARALGVDVLKVKLKAITLSGALTAAAGAFYLQYF 228 Query: 254 DRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + + + ++ V+ ++GG ++ L G+ ++ Sbjct: 229 LYLDANIAYGVWISVEVLLAAMVGGRGTVLGPLVGAFALHGLGDVTKQYAG--------- 279 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + L V+ L+ L Sbjct: 280 --GIPGIDLAVYGAVLIFVVAFAPSGLIGL 307 >gi|289523481|ref|ZP_06440335.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503173|gb|EFD24337.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 297 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 94/305 (30%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G S+V G L L++ + +GAY + L + +P Sbjct: 10 FLNAVTLGSLYALIAIGYSMVYGILRLINFAHGEIFMLGAYFVFWGTTLLHLPWLVAVPT 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ CG+++ + + D I+ LI + L + + R + Sbjct: 70 AIAVTALCGVLVDRCAYRPLRDAPRISALISAIGVSFFLQNFAIVVFSA-----IPRPVY 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + I + + +L ++ + +T A R I + + Sbjct: 125 RPGWLVTPILIQGVHFLPLTLVVPFISFVL-----MLVVLYIVYKTKPGLAMRAISKDIE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + ++ F + SA +G ++ ++ M ++GG+ Sbjct: 180 TSRLMGVSVDQIVAITFMIGSALAAASGIMWSLRYPQV-HPMMGMIPGFKAFIAAVVGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + + F + L R Sbjct: 239 GSIQGAVIGGMLLGFIEIMIVAFFPNLSGFKDAFAFVLLIFLLLL-----------RPTG 287 Query: 339 LLRLR 343 ++ R Sbjct: 288 IMGER 292 >gi|254695126|ref|ZP_05156954.1| branched-chain amino acid ABC transporter, ATP-binding/permease protein [Brucella abortus bv. 3 str. Tulya] gi|261215481|ref|ZP_05929762.1| predicted protein [Brucella abortus bv. 3 str. Tulya] gi|260917088|gb|EEX83949.1| predicted protein [Brucella abortus bv. 3 str. Tulya] Length = 570 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAMFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|301166940|emb|CBW26519.1| putative transport system permease protein [Bacteriovorax marinus SJ] Length = 299 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 86/297 (28%), Gaps = 13/297 (4%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 +Y+ + Q IY + A G ++V G + L++ Y IG + G+ Sbjct: 8 FFWDLGQYLLNGLTQGSIYALIALGYTMVYGIIKLINFAHGEFYMIGGFI-GFYTIAAGV 66 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + L P++ + +G +I+ + I LI + + G Sbjct: 67 PLTLAFPIAMVGAGVIAVIIERIVYRPIRSAGRIPALITALGTSLFFQYTGQLVIGADAK 126 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + I+ + ++ +L+ L + + +T I A Sbjct: 127 A-----------FPTAIKQHTWFVGELMISNIQVIILVSTFILMIFLWWLVNKTRIGKAM 175 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 + N A + F V +A G AG + M + Sbjct: 176 KATSYNHDAAELMGIDTNKIISFTFFVGAAMAGAAGVLVGMYYSTVE-PMMGLIPGLKAF 234 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 +LGG+ + L L G + + F + I Sbjct: 235 IAAVLGGIGIIPGAVIGGLTLGVAENLVVGFWESTYRDGIAFLILILILLVKPAGIL 291 >gi|256829003|ref|YP_003157731.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256578179|gb|ACU89315.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 316 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 111/322 (34%), Gaps = 31/322 (9%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--------------V 82 + I + +Y +FA G ++V LG+++ + +GAY Sbjct: 8 QNILNGLSIGSVYAIFALGYTLVFSILGIINFAHGAVFTLGAYCTYALAVGDFGLNGLLA 67 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + L + + ++++G G+++ + + A L + LI Sbjct: 68 GMSLPFSLPFPVALLGGSVMAGFVGVLVERLAFRPLRAKGADPLLALVSSLGVALILVNC 127 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + + G+ + F+ + +L + + ++ Sbjct: 128 LQFLVGAEIYSFPSDIFGS--LPMAMIFKMDGKILAVRTVQLIILGVSLAMLLVLAWFMN 185 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 RT + A + +N + L + LS F +S A G+AG AS P F Sbjct: 186 RTRMGKALQATAENPETASLLGINVDRYILSTFFISGALGGLAGTLIGASFGLAGPY-FG 244 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 S + +++++LGG+ S+ ++ ++ Sbjct: 245 VSYGLKGLAVIVLGGLGSIPGAVLGGLVIGLGEAFL--------------PPDYSSMKEA 290 Query: 323 LMVIALFLVILMRSHSLLRLRT 344 + + LF+++L R LL +T Sbjct: 291 VAFVMLFVILLARPQGLLGQKT 312 >gi|89054757|ref|YP_510208.1| inner-membrane translocator [Jannaschia sp. CCS1] gi|88864306|gb|ABD55183.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Jannaschia sp. CCS1] Length = 288 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 69/283 (24%), Positives = 106/283 (37%), Gaps = 40/283 (14%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 +V G+ SL IGAY+ IL G + I ++ M++ +P + Sbjct: 26 FIVLRAGVFSLATAAFAGIGAYTAAILAVDIGAHPVIGILCGTLMGMLVAMVLSIPLARL 85 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 RG Y AIAT+ +I ++ I + +TNG GI + GT Sbjct: 86 RGVYQAIATVAFIQICLSLNIYAEGLTNGAMGINSIPKTVGTGT---------------- 129 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 L L+ +I + + + A+ TIR ++ SL +I ++ AFA+ Sbjct: 130 ---------LFVFAALATYLIWAIEKGRLGRAFNTIRQDEAVAASLGISIRKHQMLAFAI 180 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S A G+ G A I P F F I ++S VI GG S+ A LI + EL Sbjct: 181 SGALAGLFGGLEAYHSYAIDPRQFGFHLLITILSYVIFGGRNSVIGPLAGAAFLIILPEL 240 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + I L LVI + Sbjct: 241 ARPLAE---------------NRMVIYGIMLILVINFMPKGVA 268 >gi|238784409|ref|ZP_04628419.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia bercovieri ATCC 43970] gi|238714701|gb|EEQ06703.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia bercovieri ATCC 43970] Length = 308 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y I +Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMMGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGCAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|239623651|ref|ZP_04666682.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521682|gb|EEQ61548.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 553 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 31/318 (9%), Positives = 82/318 (25%), Gaps = 9/318 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y I+ + + + + I ++ Q + A G++ ++ G L+ Sbjct: 230 YIAIILIFIGLCIAAPVVKNVKLLTYNNILNILQQASPRMFLALGVAGLILLTG-TDLSI 288 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G + I+ + + + V G+ + L + Sbjct: 289 GRMVGMGMTTATIIMHQGINTGAVFGHVFDFTGMPIGLRVVFALFM--CIVLCTCFTAIG 346 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F I+ + + + + V P + ++L Sbjct: 347 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIEPAIPKMIIPKVNGFPTIILWA 406 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + +T + N +A ++ + AF ++ G Sbjct: 407 VAAIVIVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFGVTMGAFILAGILYGFGSWLEC 466 Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304 A + + I+ ++ GG+ +S + I ++ + Sbjct: 467 ARMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVLIFTVLIYSLTILGID 526 Query: 305 YFNSLLKFDCSFNMRHTT 322 + T Sbjct: 527 TNLQFVFEGIIIITAVTL 544 >gi|149203223|ref|ZP_01880193.1| ABC transporter, membrane spanning protein [Roseovarius sp. TM1035] gi|149143056|gb|EDM31095.1| ABC transporter, membrane spanning protein [Roseovarius sp. TM1035] Length = 370 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 104/344 (30%), Gaps = 27/344 (7%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + L L + +++ + + + L + + L++ GS GLL+L Sbjct: 3 TRLYYDLAALVLFALVIVLGVPALMGFDGFELNTFARYLALAIVSLALALSWGSAGLLNL 62 Query: 69 NCVIAYAIGAYSYVILG-------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + +G+Y+ + + W +P ++ + Sbjct: 63 GQAATFGMGSYAMAMHLKLKASGEALPDFMGWNNVPELPLLWAPFHSLGFTLLAGLLVPA 122 Query: 122 LAIATLIMSEI------FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + +I + + + + + L + Sbjct: 123 FVGGLIAIFMFRARIAGVFVAIITLAFLVAFQLVVIEQQGITGGQNGLTGLAPLSLMGWT 182 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 Y + YY++ G + + L+L + R IR++ + + F Sbjct: 183 VDTYGVGFYYLVAGCLMAAVTFGLYLTHSKFGLILRAIREDADRTRFFGYNVANYQTVIF 242 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 +S+A G +G + + SP S ++ ++ +GG S+ A I+ + Sbjct: 243 CISAALAGWSGMLYTLVLEFASPTYMSVSFSLAIVIWCAVGGRDSVIAAAIGAIIVNLLE 302 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + F ++ + LV++ L Sbjct: 303 GRLSDV--------------FVEGWNLMLGVIFVLVVMFMPRGL 332 >gi|89069329|ref|ZP_01156688.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] gi|89045096|gb|EAR51167.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] Length = 298 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 97/303 (32%), Gaps = 21/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + Y + A GL+IV +GL++ A G YS ++G+ + +L+ Sbjct: 8 FLNALSFGAEYALIALGLAIVFSIMGLVNFAHGEVIAFGGYSLAVVGTILTGNPLILMGF 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + A +++ + + D L+ + IL + + ++ Sbjct: 68 VLLACVAVAVLLEKVAFRTVRDADITTGLLTAFGVSIILQNVFLLLGSPRPVAATQLIFL 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T V Y + A + L+L R+ + A R + + Sbjct: 128 DRT----------LWLGPVQVSSLQIYETVATILAIAGLGLFLTRSNLGIAMRAAARDFE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 AFA+S G+A F A R +P M F + ++GG Sbjct: 178 MVRLCGLRANRVVSGAFAISGLLAGLACIFIMARRGSAAPHM-GFDPVLTAFVACVVGGF 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L + L+ S+ + + LV++ R Sbjct: 237 GSLPGAVLGGFLLGFLE----------VGMLVLLPQSYGGLARAAVFAMVALVLIWRPDG 286 Query: 339 LLR 341 +L Sbjct: 287 ILS 289 >gi|238927651|ref|ZP_04659411.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas flueggei ATCC 43531] gi|304438256|ref|ZP_07398197.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|238884576|gb|EEQ48214.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas flueggei ATCC 43531] gi|304368622|gb|EFM22306.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 294 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 90/303 (29%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G + L++ Y +GAY + + ++ Sbjct: 11 LINGISLGSIYALIALGYTMIYGIIKLINFAHGDIYMVGAYLGFYAITLGIPVVPAILIS 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+ S ++ L R + + + + + Sbjct: 71 MAVTSLLGVVVERLAYRPLRHAPRISVLITAIGVSFLLE------------YVMMAIVSP 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + + F +I ++ L + +R T I A R + + Sbjct: 119 TPRTFPATLSDVSFDLGGLIISGQQMLIMGVTLLLMLILTYIVRSTKIGKAMRAASYDTE 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + FA+ SA +AG + I P M I + GG+ Sbjct: 179 AAQLMGINANRIISITFAIGSALAAVAGVLIGIYYNSIDPLM-GIMPGIKAFVAAVFGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L +L V G+ F F F L LV+L+R Sbjct: 238 GILPGAVVGGIVLGIVEAFISGLGFSMFRDAAAF-------------AILILVLLIRPAG 284 Query: 339 LLR 341 + Sbjct: 285 IFG 287 >gi|83311558|ref|YP_421822.1| ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magneticum AMB-1] gi|82946399|dbj|BAE51263.1| ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magneticum AMB-1] Length = 330 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 107/308 (34%), Gaps = 22/308 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY--GLSIWL 94 Y+ S+ + ++ + +I++G G LSL + +GAY+ L ++ L Sbjct: 24 PYLLSVLVVVMYFAYVGQAWNIMMGFAGQLSLGHTLYVGLGAYTAGALFVHLGVPAALGL 83 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 V+A + + +G Y A+ T+ +E + + + Sbjct: 84 FAAVAAAVLVGGAVGALGFRFGVKGVYFALLTIAFAEFTRILFEHIPGLGGPGGLFLPVG 143 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + + YY++L M + L R+ + W +R Sbjct: 144 DRTGIDLIHLRGH------------PLMFYYLILAMTVGIFLLCRKLVRSRLGYTWLAVR 191 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIV 273 ++Q+A +L + AKL A +S+ + G FFA + + P+ F + +I +I Sbjct: 192 EDQEAAAALGINVFRAKLYAVMLSAGLTALGGVFFAFYYNNLFPNQAFGMNRSIEIILAP 251 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 I+GG+ +L IL + E ++L ++ Sbjct: 252 IVGGLGTLFGPILGALILTPLGEGITMATE-------ALGFKAAGIKQLCYGLSLLAIVK 304 Query: 334 MRSHSLLR 341 + Sbjct: 305 FLPDGVWP 312 >gi|187477449|ref|YP_785473.1| ABC transporter permease [Bordetella avium 197N] gi|115422035|emb|CAJ48558.1| ABC transporter, permease protein [Bordetella avium 197N] Length = 321 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 119/328 (36%), Gaps = 31/328 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL + + A + + L + + +I+ G G LS + + + Sbjct: 5 LLTIALFGAALVAATALTESGVALTFVMMSLYAALLSQAWNILGGYGGQLSFGHALFFGV 64 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134 GAY+ + G++ WL +P++ + G+ +G + + +G Y A+ TL +E+F+ Sbjct: 65 GAYAQALAQLNLGINPWLALPMAIALGALVGLAVGGLTFRYGLKGSYFALVTLAFAEVFR 124 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + G + + Y+LLG L+ Sbjct: 125 ILALSVSFTGGGAGLMLPLQ---------------EGVANMQFGSRRGYIYLLLGFVLLA 169 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + WLR + + +RDN+ A ++ + KL A+S+AF+ AGAF+ Sbjct: 170 LLVTAWLRHSRFGAYLQAVRDNEDAARAIGVNPLRVKLGGIALSAAFMSAAGAFYVQVFQ 229 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I P F + ++ + I+GG+ +L L + +L + Sbjct: 230 YIDPGIAFGTAVSVEALVGAIVGGLGTLWGPLLGAVTLHALSDLTRNLFG---------- 279 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + L + + + Sbjct: 280 -ELPGISMVIYGVVLIV--MFLPRGITG 304 >gi|13507188|gb|AAK28501.1|AF315580_8 amino acid transport BraE-like protein [Agrobacterium tumefaciens] Length = 346 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 95/324 (29%), Gaps = 18/324 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V +L L + ++ + A L++ G G+L + +G Sbjct: 14 IVSAIILALTILLPATLDLFTILQLTVFVVMGVLALSLALSWGLGGILCFGQAAFFGLGG 73 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y I +G S ++ A+ + ++ + + + + I Sbjct: 74 YTYAIAVINFGESTLPVLLAIAVPALFALVLGWFMFMGRLSELYVGVITLCVSLILYNFI 133 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + G + F + M+ +++ L + Sbjct: 134 NSTSDPWYRIGKAQING---FNGMSSVPTLNIPFSPDAWLTPNQMFVLVMVSLLLVYLMC 190 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 ++ ++ R N+ L KL F + SA G AG F ISP Sbjct: 191 KFVAASSWGRVVAATRQNEVRAELLGYDTARIKLGIFVLGSAVAGYAGCLFTNWNAFISP 250 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 ++F S + +I +I+GG + L + + Sbjct: 251 NVFSLSMSAQIIIWMIVGGRETFIGPVIGAIALQYLTTRLGS---------------SGL 295 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + L L +++ L+ Sbjct: 296 NANVALGAILMLFVVLVPRGLVPT 319 >gi|317404503|gb|EFV84912.1| hypothetical protein HMPREF0005_02466 [Achromobacter xylosoxidans C54] Length = 304 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 98/308 (31%), Gaps = 15/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + + A GL+++ G +G+++L Y +GAY Sbjct: 8 LLNGLQFGAMLFLLAAGLTLIFGIMGVVNLTHGSFYMVGAYCAAYAIGST---------- 57 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++G ++G + + I L + +L + + + + Sbjct: 58 GSFLAGVLAALLGAGLYGLSVEVVVIRKLYKRDHLYQVLATFGLLLFSNEAVSLIFGRRP 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + S + + Y + + ++ + + RT I R D+++ Sbjct: 118 PLVGIPSFLEGAVTLAPGFQYPLIRLSFIAVGALVAVGLWWLVNRTRIGMLIRAGADDRE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L I F + + G+AG A I ++++GG+ Sbjct: 178 MVDALGIDIKKLYTLVFGLGALLCGLAGVMAAPLLAV--EIGMGERILITTFVVIVIGGV 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMR 335 S+ ++ V + ++ + + + + + +V++ + Sbjct: 236 GSVRGALAGALLVGMVDSMGRAFLPQLLGAVFSPATADPLAAGLASASIYVLMAIVLIAK 295 Query: 336 SHSLLRLR 343 L R Sbjct: 296 PGGLFPAR 303 >gi|120556769|ref|YP_961120.1| inner-membrane translocator [Marinobacter aquaeolei VT8] gi|120326618|gb|ABM20933.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Marinobacter aquaeolei VT8] Length = 399 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 90/329 (27%), Gaps = 36/329 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84 + +M + L Y A GL + G G+LSL + + +G Y + Sbjct: 34 DPFRLNMVGKYLTYAFVAIGLVMCWGKAGILSLGQGVFFGLGGYCMAMFLKLEASTPEAT 93 Query: 85 -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + S L F + + Sbjct: 94 AIQSTPGIPDFMDWNQLTELPWFWEPFHSFSFTLLAIVGVPVLLAFIIGFAMFTRRVGGV 153 Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193 +A L L + + + +Y+V +G+ F+ Sbjct: 154 YFAIITQAIAAILTILIIGQQGYTGGVNGITDLQTLMGWDIRTDEAKTILYFVCVGLLFV 213 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + +++ + + + + K+ F +++AF G+ GA F Sbjct: 214 CLFVARFVQNRKLGRILVAMNAQENRVRFSGYDVAAFKIFVFCLAAAFAGIGGALFTLIV 273 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ LGG S+ ++ + F Sbjct: 274 GFMSPSFIGIVASIEMVIFCALGGRLSILGAVYGALLV--------------NAAKSGFS 319 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 SF M V+L + L L Sbjct: 320 ESFPELWPFAMGALFIGVVLAFPNGLAGL 348 >gi|330807907|ref|YP_004352369.1| high-affinity branched amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376015|gb|AEA67365.1| Putative high-affinity branched amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 307 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 86/290 (29%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIAIAGLSMMGLDSVPL 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + + I I + + Sbjct: 71 LMTAAFIASIVVTSSYGYSIERIAYRPLRGSNRLIPLISAIGMSIFLQNTVLLSQDSKDK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + + V+ V + + L++ R+ + A R ++ Sbjct: 131 SIPNLIPGNFAIGPGGAHEVLISYMQIVVFVVTLVAMLGLTLFISRSRLGRACRACAEDI 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A + I+P+ F + + +LGG Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAIAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ +L + + ++ F + I Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|262276905|ref|ZP_06054698.1| inner-membrane translocator [alpha proteobacterium HIMB114] gi|262224008|gb|EEY74467.1| inner-membrane translocator [alpha proteobacterium HIMB114] Length = 354 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 105/335 (31%), Gaps = 26/335 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + LLLFL + + + +LI ++ A +I G +G S ++ + +G Sbjct: 9 LYICGALLLFLLVAPFVFVNFKLQLA-FMLILIILAMTWNIQGGEMGYNSFGNIMFFGVG 67 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y + + + L + A+ I++ + + Sbjct: 68 MYLCASMQIGLYFPLAEWTESGGEKTFVHEPDQYFKGLALGLAFAAMIPPIIAGLIGYGI 127 Query: 138 IKWKPIT--------NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + +G + F + F+Y++ L Sbjct: 128 LGLRGHYFAICTLGIGIASGELAGGIELIGAGQGMTAPPFPKGLGDLETRGEFLYFLCLI 187 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF- 248 + + + I WL T IRDN+ ++ + K++ + +S+ F G+AG Sbjct: 188 LLVATFTFIRWLYTTRFRLVLNAIRDNEDKAEAMGIETMRYKITGWMISAFFCGLAGGLV 247 Query: 249 --FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + + + ++ + ILGG +L + E Sbjct: 248 GTMVGYIEPVEVAFDGREMGVFMVLMTILGGKGTLWGPIIGASAFHIFKE---------- 297 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F F + + + ++++ L+ Sbjct: 298 ----SFWTLFLGWQYVALGVLIIVIVIYFPEGLMG 328 >gi|192293245|ref|YP_001993850.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192286994|gb|ACF03375.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 355 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 112/338 (33%), Gaps = 14/338 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L ++ +++ ++ +I I+ +++G G +S + Y Sbjct: 13 VLSLLLITIVVVLAITPFVFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFY 72 Query: 75 AIGAYSYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IG+Y+ I G S + + ++ +++GL SL+ + A+ TL ++ Sbjct: 73 GIGSYAVAIALYSMGPSWAAVGAGVLIGLPLAALLALVIGLFSLRVEAIFFAMITLAVAS 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F + + +T G+ G + + F + I YY++L C Sbjct: 133 AFLVLASQLSWLTGGEDGRSFSLP----ELLRPGTVFVKDFFGVRINGRILTYYIILVGC 188 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 +L + + + +R+N+ +L +F A +++ AG A Sbjct: 189 AGMILALLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVLAALVAAAAGVLNAM 248 Query: 252 SRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 FS + ++ +V++GGM ++ I I + + Sbjct: 249 WLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASGAAA 308 Query: 311 KFDCSFNMR------HTTLMVIALFLVILMRSHSLLRL 342 + + + ++ Sbjct: 309 DAGLPLLPNLLHPDRWLLWLGLLFVASVYFFPTGIVGR 346 >gi|209520093|ref|ZP_03268868.1| inner-membrane translocator [Burkholderia sp. H160] gi|209499466|gb|EDZ99546.1| inner-membrane translocator [Burkholderia sp. H160] Length = 308 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 114/284 (40%), Gaps = 21/284 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + L++ YI + + +FA ++ G G ++ +GAY Sbjct: 12 IAVALVVMAATLPWWLSGYILGVLTVAYYFGVFAMSWDLLFGFAGEVNFGPTFLIGLGAY 71 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 S IL +R+GL I + + ++ G+++ +P+L+ RG Y + TL+ + QN ++ Sbjct: 72 SAAILDARWGLPIPVCVIAGGGVALVGGLLLAVPALRLRGPYFGLVTLVAVLLLQNAIVI 131 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + +T G+ G+ V D + Y++ L + A ++ Sbjct: 132 FAGVTGGEIGMMVPDVMSVDANH--------------------NYWIALAFLIVCAILLF 171 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS-P 258 L R+A+ + + +L + KL AF +S+ F G+AGA + S Sbjct: 172 GLSRSAVGLILQASGQDATGAQALGFNVTRHKLVAFCISAVFSGVAGAMLVFYQGTASVS 231 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 + S + +I +LGG ++ + LI E + Sbjct: 232 TVVDLSVGVQIIIAAVLGGRRTILGAVLGSIFLIVAGEFLRPLG 275 >gi|241666642|ref|YP_002984726.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862099|gb|ACS59764.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 329 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 122/310 (39%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +GL L I + Sbjct: 42 FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKAWGLPPELGILIGVA 101 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G++MG +++ +G Y A+ TL +S++F ++ + Sbjct: 102 GAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEG--------------ED 147 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R F + MYY +L + + II + ++IR+N++ Sbjct: 148 GIQSVPRGHLFGFIDLNSSTNMYYFVLAVFIIGVLIIWRFINSPFGMILKSIRENEQRAI 207 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AGA + + + + VI + +LGG+ +L Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +++ + F T + I + +L+ ++ Sbjct: 268 IGPLFGAGLVVALENYLATSEFPV---------------TIITGIVFMVCVLIFRRGIIG 312 Query: 342 LRTPSNFLER 351 S + Sbjct: 313 EFYASRLGRK 322 >gi|158929984|gb|ABW82965.1| ABC transporter [uncultured bacterium pEAF66] Length = 309 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 103/314 (32%), Gaps = 26/314 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS---------YVILGSRYG 89 I + + +Y + A G ++V G L L++ IGA V G Sbjct: 8 IINGLVIGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMVGLSILKFLQVVSPEMHGG 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L I + + +I+ + + + +A LI + +L+ + G Sbjct: 68 LMLALAILGAIPVCMIVNVIIERVAYRRLRNAPRLAPLITAIGVSYLLVTFAMWYWG--- 124 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + L+ + +L ++L + +T + A Sbjct: 125 --------RAPLSFPQLLSSEPISIGGAVISQTQVLLLALALLSMGGLVLLVEKTKMGRA 176 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R +N + + ++ FA+ +A +AG + A+ I M F + Sbjct: 177 MRATAENPRVAGLMGVDSNKVIVATFAIGAALAAVAGVMWGANYSSIQFAM-GFLPGLKA 235 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +LGG+ ++ +L + L G L + + L Sbjct: 236 FCAAVLGGIGNIYGAMIGGILLGLIEALGAGYIGDLTGGFLG-----SHYQDIFAFVVLI 290 Query: 330 LVILMRSHSLLRLR 343 +V+ +R ++ R Sbjct: 291 IVLTVRPSGIMGER 304 >gi|290510013|ref|ZP_06549383.1| branched-chain amino acid transport system permease [Klebsiella sp. 1_1_55] gi|289776729|gb|EFD84727.1| branched-chain amino acid transport system permease [Klebsiella sp. 1_1_55] Length = 299 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 101/291 (34%), Gaps = 11/291 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GA+S + L S GL + + + Sbjct: 10 VVNGMSLGGMYALIAIGYTMVYGVLRLINFAHADVMMVGAFSTLFLFSSVGLPFGVAVFL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G GM++ + + I+ LI + L + G + + + +F Sbjct: 70 TLGLCGLFGMLIDRVAYRPLRQASKISMLITAIGVSFFLENLFNVMFGGSSRFFSAPDFF 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T VI + V L L +I+ L RT A R + + Sbjct: 130 NQTR----------AFGSVIITNVAWIVPLITVLLLLAILWLLYRTRYGMAIRAVAFDVN 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ S+ + G F++ S I P M + + +LGG+ Sbjct: 180 TVRLMGIDANRIISLVFALGSSLAALGGVFYSISYPTIDPLM-GVLIGLKAFAAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 S++ IL + + F F + + + Sbjct: 239 GSVTGAVLGGFILGFTEVVAVAIFPELGGYKDAFAFLFLILVLLFRPVGIM 289 >gi|253686513|ref|YP_003015703.1| inner-membrane translocator [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753091|gb|ACT11167.1| inner-membrane translocator [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 308 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 87/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGAAFIAAVVISSAYGWSIERVAYRPVRTSKRLIALISAIGMSIFLQNYVSLNQGSRDV 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWVLGESNGFAATISSMQLIIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L + F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|241765732|ref|ZP_04763678.1| urea ABC transporter, permease protein UrtC [Acidovorax delafieldii 2AN] gi|241364392|gb|EER59515.1| urea ABC transporter, permease protein UrtC [Acidovorax delafieldii 2AN] Length = 404 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 102/334 (30%), Gaps = 36/334 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + ++ + L Y A GL +V G G+LSL + + +G Y+ + Sbjct: 32 DIFRLNLVGKYLTYAFVAIGLVMVWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPIST 91 Query: 96 IPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + + F+ +A +I+ +I + G+ Sbjct: 92 KIQSTPGIPDFMDWNQITELPAFWVPFKSLPFTLAAVIVVPTLLAWVISFAMFKRRVGGV 151 Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 Y A + L + + + + +YYV + + Sbjct: 152 YFAIITQAVALICTVLIIGQQGYTGGVNGMTDLKTLWGWDTRTDSAKYILYYVCVALLIG 211 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 S + W++ + +RD + + K+ F +++A G+ GA F+ Sbjct: 212 SIVLCRWVQTGKVGTLLLAMRDKEDRVRFSGYDVANFKVFTFCLAAALSGIGGALFSLQV 271 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG SL T ++ L F Sbjct: 272 GFMSPSFVGIVPSIEMVIYAAVGGRMSLVGAVYGTLLVNAGKTL--------------FS 317 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 SF LM V + L L Sbjct: 318 ESFPEMWLFLMAGLFIGVTMAFPMGLAGLWESHI 351 >gi|119872104|ref|YP_930111.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184] gi|119673512|gb|ABL87768.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184] Length = 363 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 102/332 (30%), Gaps = 34/332 (10%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-------------VILGSRYG 89 + IY ++ L++ VG LGL V+ A+G + + S+ G Sbjct: 18 AVLFAIYGIYVLSLNLEVGYLGLPQFGKVMFLALGGLTVGGITTKIALEIYKATIASQLG 77 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + I + + Y + L+ + + + + G A Sbjct: 78 IDPLADIDRYCSAYQYQTVTIINNIFSMSPLYGTLFFLLSITLAALLAGVFGVLMAGPAL 137 Query: 150 IYVADRLYFLGTT------------------VRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 D L L V + F + Sbjct: 138 RLREDYLGILLLVSAETIRVITTYTPPIACGVFGAVVPDPFAWMGSYRPWGYLAITALFL 197 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ I+ L + A R IRD + A I+ ++ A +SA G+AGA Sbjct: 198 LLTLVILERLGNSPFGRALRAIRDAEVAARVFGKDIVKFRVRVLATASALSGVAGALLVF 257 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + ++ F I +++I+GG + A+ + ++ Y + Sbjct: 258 YNNFVNMGQFVPLYTFIAWAMLIIGGTGNNIGALIGVAVYYALE---RIISIYKESIRSI 314 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + IA+ LV++ R + + Sbjct: 315 VNVDPIFFQYIIFGIAIILVLMFRPQGIFGEK 346 >gi|56696809|ref|YP_167171.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56678546|gb|AAV95212.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 336 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 35/334 (10%), Positives = 87/334 (26%), Gaps = 19/334 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 L S + + A G++++ G L + A GA V++ Sbjct: 3 ILNALVALSNFVLIPAIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGAMITVLVTW 62 Query: 87 RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 L +P + A ++ +F + A +++ + Sbjct: 63 WMQSHGISLGPLPTALLALPFGILGCMALVLVTDRAVYRFYREQKAKPVILVIVSMGVMF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + + + ++ A + Sbjct: 123 IMNGLVRFVIGPNDQNFADGTRFLISARDFKKMTGLDEGLAIKTTQALTVVVAVICVALL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L RT + R DN+ + + + +A AG + + Sbjct: 183 FWFLNRTRTGKSMRAYSDNEDLALLSGINPERVVMYTWLIVAALATTAGVLYGLDKSF-- 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309 F + + + I+GG+ S ++ + + + Sbjct: 241 KPFVYFQLLLPIFASAIVGGLGSPLGAIAGGFVIAFSEVTVTYAWKKVLGYLAPEGMSPD 300 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L +V+L + L + + Sbjct: 301 GLVQLLSTDYKFAVSFVILLIVLLFKPTGLFKGK 334 >gi|33603267|ref|NP_890827.1| branched-chain amino acid transport system permease [Bordetella bronchiseptica RB50] gi|33577391|emb|CAE34656.1| branched-chain amino acid transport system permease [Bordetella bronchiseptica RB50] Length = 320 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 116/301 (38%), Gaps = 29/301 (9%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y+ ++ + IY + A GLS++VG G +SL IGAY+ I R+ + W Sbjct: 19 TGNAYLINLFVVCAIYALPAIGLSLLVGHCGQISLGHAAFVGIGAYAAAIASQRWDMDPW 78 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + +A ++ A +G + RG +LA+ATL + I +L++W +T G GI VA Sbjct: 79 LAVLFAAALACAAAWAVGKLVFRLRGHHLAMATLALGMIVHTVLVEWHDVTGGPDGISVA 138 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L + S + + ++ + L R+ A R + Sbjct: 139 GVLKVGSLELASDP--------------AFFVLGWLAVIVALILADNLIRSPFGLALRVV 184 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 +++ S+ K S A G++G + ISPD F + +I ++ IV Sbjct: 185 GESELVAGSIGIAPARVKQLIMMASGALAGLSGGLYTFWMGYISPDPFNVALSIKLLLIV 244 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 L G T + ++ V E L + L L +L Sbjct: 245 ALSGFTGTWRTLVGVFFVVLVSEGMKSF---------------GHLDVILYGLLLILTML 289 Query: 334 M 334 Sbjct: 290 F 290 >gi|316932908|ref|YP_004107890.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315600622|gb|ADU43157.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 305 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 104/312 (33%), Gaps = 28/312 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90 + + + IY + A G ++V G +G+++ + IG + +I + L Sbjct: 8 LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSFGLTFVPL 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ VS I+ G + + + +A ++ + +L+ + ++ G Sbjct: 68 ILLVVLLVSMAITALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLMNFAQVSQGARVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 V + T S F S+ I + VLL A + +T + Sbjct: 128 PVPPIITGGYTLHESADGFVVRLSNVQILVVVSTIVLL------AIFTWLVAKTRLGRDM 181 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +Q L + F + +A +AG + + M F I Sbjct: 182 RACEQDQTMAALLGVNVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFM-GFVAGIKAF 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL ++ + + + F L + Sbjct: 241 TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFSVEYKDVAAFS-------------ILIV 287 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 288 VLIFMPTGLLGR 299 >gi|302551568|ref|ZP_07303910.1| D-ribose ABC transporter permease [Streptomyces viridochromogenes DSM 40736] gi|302469186|gb|EFL32279.1| D-ribose ABC transporter permease [Streptomyces viridochromogenes DSM 40736] Length = 650 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 106/325 (32%), Gaps = 39/325 (12%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +V + + + G + + ++G+Q + + A+G++ V+ S G + L+ Sbjct: 28 ALTALIVLVVAMSVLSGDFLTTDNLLNVGVQAAVTAVLAFGVTFVIVSAG-IDLSVGSVA 86 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ A + G+ ++ + ++ ACG+I G+ + ++ Sbjct: 87 ALSATVLAWSATSAGVPVFAAVLLAIATGVACGLINGILISYGKLPPFIATLAML----- 141 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 VA L + + + ++ +L M + Sbjct: 142 ----------------SVARGLSLVISEGSPIALPGSVSHLGDTLGGWLPVPVLVMIVMG 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L RT I + I N++A + KL+ +A S F +AG AA Sbjct: 186 LIAAFVLGRTYIGRSMYAIGGNEEAARLSGLRVKRQKLAIYAFSGVFAAVAGVVLAARLS 245 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 P E + ++VI GG S IL + +N F Sbjct: 246 SAQPQAADGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLNVSAF--- 302 Query: 310 LKFDCSFNMRHTTLMVIALFLVILM 334 ++ + + L +L Sbjct: 303 ---------WQQVVIGVVIALAVLF 318 >gi|239834017|ref|ZP_04682345.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301] gi|239822080|gb|EEQ93649.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301] Length = 328 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 124/343 (36%), Gaps = 28/343 (8%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ + LN+ + ++L +G + ++ +I+ + L +V Sbjct: 1 MTDVTQSLNQRRHSRAGFLGITAIILASVIGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G G+ +L + GAY I + + L+ + + G++ G L+ G Sbjct: 60 GYCGIATLGHAALFGAGAYGAGIAAAHFGITDPLLMTLIGLIAGAITGLVSGAVILRAHG 119 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 + ++ + +F K T G G+ LG F +Y Sbjct: 120 LAQLVLSIAVIHLFHEAANKASSWTGGSDGLSGIAPDPILGI------------FEFDLY 167 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 +Y + + +S + ++ R+ R ++++ ++ ++ +L + +S Sbjct: 168 GHTVYIYAVVLLLISFIFLRFVVRSPFGMLCRGVKEDPIRIHAMGASVQSVQLRMYVISG 227 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A G+ GA A S + D F+ + + +++LGG SL T + + +L Sbjct: 228 AVAGVGGALNAISTQVVGLDSLSFTLSAEALVMLVLGGTGSLFGGLIGTVVFMWFEDLVS 287 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 N +++ T++ L V+L L Sbjct: 288 AANPFHW--------------LTMVGALLIAVVLFAPRGLYGT 316 >gi|293603115|ref|ZP_06685549.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818509|gb|EFF77556.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 304 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 99/308 (32%), Gaps = 15/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + M A GL+++ G +G+++L Y +GAY Sbjct: 8 LLNGLQFGAMLFMLAAGLTLIFGIMGVVNLTHGSFYMVGAYCAAYAIG----------TT 57 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++G ++G + L I L + +L + + + + Sbjct: 58 GSFLAGVLAALLGAGLYGISVEVLVIRKLYKRDHLYQVLATFGLLLFSNEAVSLIFGRRP 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + S + + Y + + ++ + + RT I R D+++ Sbjct: 118 PLVGIPSFLEGAVTLAPGFQYPVIRLSFIAIGALVAVGLWWLVNRTRIGMLIRAGADDRE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L I F + + G+AG A I ++++GG+ Sbjct: 178 MVDALGVDIRKLYTLVFGLGALLCGLAGVMAAPLLAV--EIGMGERILITTFVVIVIGGV 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMR 335 S+ ++ V L +++ + + + + + +V++ R Sbjct: 236 GSVRGALAGALLVGMVDSLGRAFLPQLLSTMFSPATADPLAAGMASASIYVLMAIVLIAR 295 Query: 336 SHSLLRLR 343 L R Sbjct: 296 PGGLFPAR 303 >gi|144901326|emb|CAM78190.1| Membrane spanning protein [Magnetospirillum gryphiswaldense MSR-1] Length = 306 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 100/308 (32%), Gaps = 15/308 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + + + A GL++V G + ++ L+ Y +GAY LG+R+ + L Sbjct: 11 LNGLQLGITLFLMAAGLTLVFGIMDVIHLSHGSFYMLGAYLTATLGARFDSYLLGLALAI 70 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +++ ++ + + L + + I + Sbjct: 71 PLVALIGMVVEWIAIRRLYERDHLDQVLATFGLIMFFNEAVRMIWGAQPIFLSPPASLAG 130 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + Y F +L ++A + L +RRT + R ++ Sbjct: 131 TVELLP----------GLFYPQFRLAILGTGLAVAALLGLMIRRTRLGMRLRAGASDRAM 180 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L I F + + +AG S I+ +V++GG+ Sbjct: 181 AGALGVNIDGLFTIVFGLGTGLAALAGGMAGTVLSV--QVGMGESILILTFVVVVIGGIG 238 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336 S+ ++ V L M S L + ++ + + + + LV+ R Sbjct: 239 SIKGALVGAILVGLVDTLARTMLPVALRSTLPASQADSVAASLSSTSVYVLMILVLAWRP 298 Query: 337 HSLLRLRT 344 L RT Sbjct: 299 KGLYGART 306 >gi|114567621|ref|YP_754775.1| branched-chain amino acid ABC transporter permease [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338556|gb|ABI69404.1| branched-chain amino acid ABC transporter, permease protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 291 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 101/306 (33%), Gaps = 26/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G + L++ Y GA++ +IL S +G ++ + V Sbjct: 6 LLNGLTLGSTYALIALGYTMVYGIVQLINFAHGEIYMFGAFAGLILVSFFGFNLIAAMLV 65 Query: 99 SAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + G+++ + RG ++ LI + L + G + + Sbjct: 66 AMLFCMLLGILVERIAYRPLRGKSSRLSALISAIGVSIFLSTLMALMAGTNTHRYPEVIA 125 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + +L L + +++T I A R + Sbjct: 126 HQTYH-----------LGSLDLSLMQILILAVSALLMIGLQFMVQKTRIGKAMRACSQDL 174 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A + + + FAV SA G + + P M + + ++GG Sbjct: 175 DASYLMGINVNRVISFTFAVGSALAAAGGVMVGVYYNAVWPYM-GMMAGLKAFAAAVMGG 233 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ L + + + + F L LV+L+R Sbjct: 234 IGSIPGAMIGGLSLGIMEIMGVAYLSSSYKDAIAFG-------------MLILVLLIRPQ 280 Query: 338 SLLRLR 343 L+ + Sbjct: 281 GLMGQK 286 >gi|257453186|ref|ZP_05618485.1| branched chain amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R] gi|317059720|ref|ZP_07924205.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. 3_1_5R] gi|313685396|gb|EFS22231.1| branched-chain amino acid transport system permease livH [Fusobacterium sp. 3_1_5R] Length = 294 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 28/306 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95 I + IY + + G ++V G L++ +GAY+ + + IW Sbjct: 7 IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYTSLFSIPIFQKMGLPIWAT 66 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + +I GM+ + + + I+ LI + L Sbjct: 67 IFPAMIICALLGMLTEKIAYRPLRNSPRISNLITAIGVSLFLENIFMKLFTPN------- 119 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + +L LS ++ L+++ T A + Sbjct: 120 ----TRAFPKVFSQVSIHLFGISFNYGSVITILLTLALSIALHLFMKNTKYGKAMLATSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + A + + F FA+ SA +A + ++ ++ P M I +L Sbjct: 176 DYGAATLVGINVNFTIQLTFAIGSALAAIASVLYVSAYPQVQPLM-GSMLGIKAFIAAVL 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ L IL + L F L +V+L++ Sbjct: 235 GGIGILPGAVIGGFILGIIESLTRAYLSSQLADAFVFG-------------ILIIVLLIK 281 Query: 336 SHSLLR 341 +L Sbjct: 282 PTGILG 287 >gi|242238063|ref|YP_002986244.1| inner-membrane translocator [Dickeya dadantii Ech703] gi|242130120|gb|ACS84422.1| inner-membrane translocator [Dickeya dadantii Ech703] Length = 300 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 101/303 (33%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GAY + + +GL + Sbjct: 11 VVNGMSLGSMYALIAIGYTMVYGVLRLINFAHADIMMVGAYMALFSVTSFGLPFGAAVIF 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S +I+ G+ + + + I+ LI + L + G + Y +F Sbjct: 71 SVLIAALLGICIDQIAYRPLRQASKISMLITAIGVSFFLENLFNVVFGGSPRYFESPPFF 130 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T +I + V L L A I+ L RT A R + + Sbjct: 131 NQT----------LNFGSIILTNVAWIVPLLTLVLLAIILFILYRTRHGMAIRAVAFDVN 180 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ S + G F+A S I P M + + +LGG+ Sbjct: 181 TVRLMGIDANHIIAFVFALGSGLAALGGVFYAISYPSIDPLM-GVLIGLKAFAAAVLGGI 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+S IL + + F F L LV+L R Sbjct: 240 GSVSGAVIGGFILGFTEVVAVAVFPELGGYKDAFAFMF-----------LILVLLFRPVG 288 Query: 339 LLR 341 ++ Sbjct: 289 IMG 291 >gi|163735728|ref|ZP_02143158.1| inner-membrane translocator [Roseobacter litoralis Och 149] gi|161390981|gb|EDQ15320.1| inner-membrane translocator [Roseobacter litoralis Och 149] Length = 404 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 67/383 (17%), Positives = 140/383 (36%), Gaps = 65/383 (16%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + + ++ LF + + + Y+ + I Y + A S++ G G S Sbjct: 8 RQVPNIAGVLLLGFFALFPLVYSGGNYDYVMHVLITAFFYAILASSWSMLAGYAGQFSFG 67 Query: 70 CVIAYAIGAYSYVILGSRYG---------------------------------------- 89 + IGAY + + Sbjct: 68 HMAFMGIGAYGTALFCHYFYITSEPTGICTEFAFFGNYFVIKNAIGVTSTTLDQDCLAQA 127 Query: 90 ------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + + + I + M G G+++GL L+ R YLA+ TL SEI + ++ Sbjct: 128 VAVWGDSVSVRPMPVLMGIILGTMAGGLSGLLVGLLVLRLRAAYLALFTLGFSEIVKAVI 187 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 IT G+AG+ + + + + +I YY++LG+ L ++ Sbjct: 188 SAEIDITRGQAGLELPALFENGVSLMGTTFDKTD--------KIPPYYIMLGLLVLCLAL 239 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + WL R+ R +R++Q A +L K+ F +++A AGA A ++ Sbjct: 240 LAWLARSRFGLFVRALREDQDAAAALGVNTTRYKVYVFTITTAMAAAAGAVQAHYVQIVT 299 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P++ + +V+++ ++GG+ + A L ++EL ++ + Sbjct: 300 PNLMFLLQMSLVVAMAVIGGVENFVAAALGAIFLQILLELLRTSF-----TIGGVEVDMT 354 Query: 318 MRHTTLMVIALFLVILMRSHSLL 340 + I L + + + L+ Sbjct: 355 VWRLVFFGILLMITLRFFRNGLI 377 >gi|187922168|ref|YP_001893810.1| branched-chain amino acid ABC transporter inner membrane protein [Burkholderia phytofirmans PsJN] gi|187713362|gb|ACD14586.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 360 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 108/324 (33%), Gaps = 26/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + + + L + ++ +M L+ + A ++ G G+L+L +G Sbjct: 26 LLMWIAAVAAVVLVPLVASPWLLAMVRDALVMGILALSYDLLWGRAGVLTLGHTTFLGLG 85 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGAC--GMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 AY + ++ ++G + + V + + + L R + AI +L + + Q Sbjct: 86 AYGFAVMTVQFGQAPLTGVAVGVLCAAGVAAVIGYFLLFAGVRLHFFAIISLAVLIVAQQ 145 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + W+ +T G GI L F + +Y + + + Sbjct: 146 LAVSWQSVTGGDTGILGIPGLSFSVDGYA----------FDLSGPRTSWYTVAAILLAAT 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +I + R+ I N+ + L F S+A +AG AA Sbjct: 196 GLIWLVCRSHYGKVLNAIATNEWRAKACGYHTPLHLLLVFVASAALAAVAGVLMAACSGV 255 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++PD+F VI V +GG A L + + + + Sbjct: 256 VAPDVFSPLLATEVILWVAIGGRGRTGGPVVAAVALTLLRQAVSSYSTDGWP-------- 307 Query: 316 FNMRHTTLMVIALFLVILMRSHSL 339 ++ +L + L Sbjct: 308 ------LMLGGLFLACVLFMPNGL 325 >gi|326331057|ref|ZP_08197355.1| branched-chain amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] gi|325951098|gb|EGD43140.1| branched-chain amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] Length = 290 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 110/311 (35%), Gaps = 26/311 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y Y + A GL+++ G LG+++ Y +GA + +L G+S+WL + Sbjct: 6 QYTVQGLAAGSFYALAALGLAVIFGVLGVVNFAHGAFYMLGAVAAAVLLDTVGMSLWLAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V ++ GM++ +++ + L+++ +L+ G +G+ Sbjct: 66 IVVPLLMLVFGMLVERLLVQWLLPLDPLYNLLLTFGLTLLLVDLVKRRYGVSGLPYERPS 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G R V ++ +V+ + + L + RT + R + Sbjct: 126 ALDG----------RVQVGGVGLPVYQLFVIGVALLVCLGVWLLMTRTRVGMIVRAATER 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L + F A G+AG A R + F II+ ++V++G Sbjct: 176 PELARALGINVGRWVTPVFGFGVALAGLAGVLAAPFRAITAEMGSDFI--IILFAVVVIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ ++ V L+ + + +V+L R Sbjct: 234 GLGSIVGAVVGGFLVGLVEAFGQAYA--------------PTFAQVLIFVLMAVVVLARP 279 Query: 337 HSLLRLRTPSN 347 L + Sbjct: 280 AGLFGREEATA 290 >gi|296127508|ref|YP_003634760.1| inner-membrane translocator [Brachyspira murdochii DSM 12563] gi|296019324|gb|ADG72561.1| inner-membrane translocator [Brachyspira murdochii DSM 12563] Length = 405 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 101/315 (32%), Gaps = 20/315 (6%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 + + ++ + + + + A G++ V+ G + L+ Sbjct: 38 FLTIVALLILYVFFVIAGRNFFTFDTFSLILRNSYFIGFLAIGVTFVI-ITGGIDLSIGS 96 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 A ++ + + +W ++ + ++ G I G F Sbjct: 97 LSLFAAMVGGVMITNFQTPMWAVLIIVIAVATLGGFINGFLISYFNLPPFIAT------- 149 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +T G +GI + + T +FR + +++L + Sbjct: 150 -----LGMLMVTKGLSGIVSKSQTIYYPTITDPQYGWFRVLFNATESNFPSGFIMLAIFT 204 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + + I+L +T + + N++A K+ A+ ++ F G+ G FAAS Sbjct: 205 IISIIVL--TKTIVGRYIFALGSNEEAARLSGIKTNKWKIIAYTIAGFFCGIGGLAFAAS 262 Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 ISP + E + ++VI GG+ S+ I+ + + F Sbjct: 263 YSSISPGAGQGYEFDAIAAVVIGGTSLSGGVGSIIGTIIGVYIMSVLKVGLPSVGVEQFF 322 Query: 308 SLLKFDCSFNMRHTT 322 + Sbjct: 323 QYFTIGIVVIIAVLI 337 >gi|145295090|ref|YP_001137911.1| hypothetical protein cgR_1033 [Corynebacterium glutamicum R] gi|140845010|dbj|BAF54009.1| hypothetical protein [Corynebacterium glutamicum R] Length = 362 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 99/317 (31%), Gaps = 18/317 (5%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + ++ +++ Y + A G+ + G G+L+L + + IGAY + Sbjct: 44 APLFLSTFQLTLMSRLVCYAIVAVGIGLAWGRGGMLTLGQGVFFGIGAYIMAMHMLYSDS 103 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI----FQNILIKWKPITNG 146 I+ A + + + G + + + ++ Sbjct: 104 QIFGTTVPQWWSIFANPAVALIAVVALPGIVAFVLGFSIFKRRIKGAYFAIVNQALAAAV 163 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + + F F I I Y+ +G+ +I WL R+ Sbjct: 164 VVLLVGQQDSLGGSNGLSGFRSFMGFAVYDPINRIMFYFTAVGVLLALVAISYWLMRSRY 223 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 RD ++ L K +A+ +++ G+AGA F ISP + Sbjct: 224 GELLVATRDAEERVRFLGYDPALIKTAAYVIAAMIAGIAGALFVPIVGIISPAEIGVVPS 283 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I+ + V GG SL +L V +F + Sbjct: 284 IVFVIAVAAGGRASLFGPVVGALVLGWVESTL--------------AQTFPSMWSYFQGA 329 Query: 327 ALFLVILMRSHSLLRLR 343 L LVI++ + ++ Sbjct: 330 ILVLVIVLLPGGIASIK 346 >gi|188582810|ref|YP_001926255.1| urea ABC transporter permease [Methylobacterium populi BJ001] gi|179346308|gb|ACB81720.1| urea ABC transporter, permease protein UrtB [Methylobacterium populi BJ001] Length = 308 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + + + + L + Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQTYLPSLFGGYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + L + +L W + +G Sbjct: 82 AMALAFLASGAMGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRTIFGPREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + S + + + +I +V+ ++ + + + R+ R + N+ + Sbjct: 140 LPSWMMGSIPVTDSIEVQINGLFVIAVTTVITLGVAVLIYRSRFGAQIRAVMSNRSMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + G+AG+ F + + IV+ GG SL Sbjct: 200 VGIDTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ ++++R L L Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VLTLLAVVAILMLRPQGLFTL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|332284428|ref|YP_004416339.1| high-affinity branched-chain amino acid transport system, permease protein [Pusillimonas sp. T7-7] gi|330428381|gb|AEC19715.1| high-affinity branched-chain amino acid transport system, permease protein [Pusillimonas sp. T7-7] Length = 308 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 103/311 (33%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + IY + A G ++V G +G+++ Y IGAY ++ S + Sbjct: 12 LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLSAIGVGSGLPLAV 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I +++ V+ +++G G + + + LI + L W I G Sbjct: 72 VILIMLIVAVLVTGVYGYAIEKVAYAPLRGGPRLVPLISAIGMSIFLQNWVAIGQGA--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R + + ++F V +++ + ++ L+++ + + A Sbjct: 129 ----RDMAVPALITGSVQFQMGSDFVVTAPYSRIMIIVVTVLMMIALSLFIKYSRVGRAS 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + + L F + + + G A + +++ F I Sbjct: 185 RACSQDLRMANLLGIDTNRIISFTFIIGAMLAAVGGVLIALAIGKLN-PFIGFIVGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L + ++ F L Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAFG-------------LLVF 290 Query: 331 VILMRSHSLLR 341 ++L R LL Sbjct: 291 ILLFRPTGLLG 301 >gi|307298585|ref|ZP_07578388.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2] gi|306915750|gb|EFN46134.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2] Length = 312 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 125/304 (41%), Gaps = 21/304 (6%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 V+ LL+ L ++ Y S+ I IL ++ + +++ G LS + +G Sbjct: 7 LVIIILLIAAALLPVVTEAYFISVAITILTFMTLSISWDMML-RTGQLSFGTAGFFGLGG 65 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +I + +G+ + I + +++G +++G+ L+ RG Y AI T+ ++ +F ++ Sbjct: 66 YTGIIAVADFGVDPLVGIILGGLLAGGVSLLLGMAILRLRGLYFAITTMALASVFMVVIR 125 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G +G V L+ + +Y+++LG+ + + Sbjct: 126 NLNKLTGGPSGKIVYTTLFNYD-------------------SVKVYWLMLGITVGTIVVS 166 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 +RT + A +IR ++ S I + F V+S G+ G+ +A + P Sbjct: 167 EVFQRTRVHFAIDSIRADETVAKSHGVNIYKYLIFVFVVTSIIQGVIGSTYALQYGFVYP 226 Query: 259 DMFKFSENIIV-ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + + +++ I++ ++GG+ S IL E + Y Sbjct: 227 ESSFSAHYLLLPIAMALVGGIYSTIGPVLGAIILGLSSEYLKLIMPYGHLIFYGVIIVVV 286 Query: 318 MRHT 321 + Sbjct: 287 VLFL 290 >gi|296272921|ref|YP_003655552.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299] gi|296097095|gb|ADG93045.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299] Length = 298 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 101/304 (33%), Gaps = 22/304 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GA+ + + L L + + Sbjct: 10 MVNGFSLGSMYALIAIGYTMVYGVLRLINFAHGDIMMVGAFLAYTFMAVFNLPFPLTVLL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +S A GM+M + K + I+ LI + L + G Y Sbjct: 70 AVTLSAALGMLMDKIAYKPLREAPKISLLITAIGISFFLENAFTVFVGGVPRAFPVPSYM 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + V + + V L L I+ L +T A R + + K Sbjct: 130 EQI----------FTVANVTFSVSSITVPLVTLILLLGILYVLYKTKYGMAIRALSFDIK 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ SA + G F+A + + M + + ++GG+ Sbjct: 180 TVNLMGIDANMIISLVFALGSALAAVGGIFWAVNYPSVE-PMMGVLVGLKAFAAAVVGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S++ I+ + + F + L LV+L + Sbjct: 239 GSVTGAVLGGFIIGFTEVVV-----------IAFFPEMGGYKDAFAFVFLILVLLFKPTG 287 Query: 339 LLRL 342 ++ Sbjct: 288 IMGE 291 >gi|108803048|ref|YP_642985.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941] gi|108764291|gb|ABG03173.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941] Length = 337 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 109/282 (38%), Gaps = 15/282 (5%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + +I + +FA L +++G GL+SL + GAY+ +LG R + L+ Sbjct: 31 FGVGIATEIYVMAIFAMSLGLIIGYAGLVSLGHAAFFGAGAYTVALLGERVSNTYVLVAA 90 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 A+ + + L G Y + TL +++ + + +T G G+ V+ Sbjct: 91 AVAVAALLACVSGALFFRS-TGAYFLMLTLAFAQVLFAAAFQAESVTGGSDGMGVSVAP- 148 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + E+ +YY++ G L ++ + R I +N+ Sbjct: 149 -------------DLGFGEISGELGLYYLMGGSFLLCYVLLRLFVSSPAGRVVRGIMENE 195 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +L KL A+ ++ G AGA ++ ++PD+ + + + +VI+GG Sbjct: 196 LRMRALGYNTFSYKLFAYTLAGGVAGFAGALYSYFNLYVTPDLLGWVFSGQALIMVIVGG 255 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 +L A A I V Y+ + F + Sbjct: 256 TGTLLGPAVGAAFFIVVRNYVSFYTEYWALIMGLIFIFFVLL 297 >gi|326330403|ref|ZP_08196711.1| branched-chain amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] gi|325951678|gb|EGD43710.1| branched-chain amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] Length = 300 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 98/294 (33%), Gaps = 19/294 (6%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 Y + A G IV + +L+ +G + L + +G++ +L +P++ + G Sbjct: 20 YALVALGFVIVFKATRVLNFAHASFVLLGGFITWQLAAEWGVNFYLALPLAMVAGALIGT 79 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + L+ + ++M+ + G + Sbjct: 80 ALQTALLQRLLGERPFSIIMMTIGVLYVFDNVTSAIWGPE-----------DRDLPDPWG 128 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 V + + + + L+ R +++ R D+Q+A + Sbjct: 129 SKTVDLGSVNLAVADLWTIGVTSAAVGAFFLFFRYSSLGLGMRATADDQEAALATGIDAR 188 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 L+A+A + A +AGA ++ + P + + + +I+GG+ S Sbjct: 189 RVHLAAWATAGALGTLAGAMLSSGAGSVGPSLG--AVAFVAFPAMIVGGLESPVGAVVGG 246 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + +L + Y L + +++L+R + L Sbjct: 247 LLIGLIQQLTALLQPEYAAWLGSGFDRVAP------FAVMVIILLVRPYGLFGE 294 >gi|168699518|ref|ZP_02731795.1| inner-membrane translocator [Gemmata obscuriglobus UQM 2246] Length = 316 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 114/323 (35%), Gaps = 18/323 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 +Y+ + L+Y + A G ++V G + L++ + +G++ + + Sbjct: 5 LATALGPAFYQYLLIGLVTGLLYALIALGYTMVYGIIELINFAHGDLFMLGSFLALQVAI 64 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 G + A +++ + G + + ++ + + G Sbjct: 65 WVGAATATGEATGAAALPTILLMLVAAPVFCAGLNVTVDRVVYKPLRNAPKLAPLVSAIG 124 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY----VLLGMCFLSASIILWLR 202 + I++ ++++GT + + + I + Y VL + ++ +++R Sbjct: 125 VSFIFMNIGVFWMGTYDLNFPKLVPQDNLTPGARIALNYKHIMVLAVTLPVMVALTVFVR 184 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 T++ A R N A + + + FA+ G+A + + + M Sbjct: 185 YTSLGKAMRATAQNPTAAQLMGINVDRVIAATFAIGGGLGGVAAVVYGLYNNTVGY-MMG 243 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F + + +LGG+ ++ I+ V L ++ Sbjct: 244 FQTGLYAFTAAVLGGIGNIPGAVLGGIIIGLVRSLGSAYVGEQWSEA------------- 290 Query: 323 LMVIALFLVILMRSHSLLRLRTP 345 L+ L ++++ R + +L RT Sbjct: 291 LIFAILIVILIFRPNGILGARTR 313 >gi|238798010|ref|ZP_04641499.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia mollaretii ATCC 43969] gi|238718113|gb|EEQ09940.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia mollaretii ATCC 43969] Length = 308 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y I +Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMIGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGCAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|311109086|ref|YP_003981939.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310763775|gb|ADP19224.1| inner-membrane translocator 60 [Achromobacter xylosoxidans A8] Length = 422 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 115/337 (34%), Gaps = 29/337 (8%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + + + LLA+ L L +Q+LI +FA +++ G G+ Sbjct: 1 MSQTRRASTIFLLALCVAALCAL---PWLLPPGQLVAAVQMLIAALFACAFNLLAGQGGM 57 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 LS + +G ++ + + G + L P+ + G G++ GL + F + Sbjct: 58 LSFGHAAYFGVGTFATIHAMNALGGAGLLPTPLMPLAGGVAGLLFGLVAGWFATMRAGVY 117 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 +++ +L P G G +I +Y+ Sbjct: 118 FAMITLALAELLHALAPHLKGVFG-----------GEAGVSAMRMPAWGFTFGSDIEVYF 166 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++L +S + + L RT + +R+N L K FA+S+ F G+A Sbjct: 167 LVLAWVLVSLAALYGLTRTPLGRLTLGLRENANRLRYLGYRPHTLKTLVFALSAMFAGIA 226 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G A + + + +F + + +GG+ + +IL + + + + Sbjct: 227 GGLQALNIEAGNYVLFDVKLSTDAVLFAYIGGVNAFLGPVLGASILTFLSQTLADITRSW 286 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 I LV+L L+ L Sbjct: 287 ---------------LLYQGILFVLVMLFVPDGLVGL 308 >gi|291279454|ref|YP_003496289.1| branched-chain amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754156|dbj|BAI80533.1| branched-chain amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 293 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 95/303 (31%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ Y IGA+ +I + + +++ Sbjct: 9 LLNGLTVGSVYALIALGYTMVYGIIKLINFAHGDIYMIGAFLGLIAATVIMKNFVVVLVF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + M G+++ + K + I+ LI + I+ + NG Sbjct: 69 AMMGCAILGVLVEKVAYKPLRNSSRISALISAIGASIIISNTVVLINGPQ---------- 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + + + ++++ L + + T + A R + N Sbjct: 119 -REAYPKLFPNITYNLGGISISLLQVFIIVISIVLMYGLYYIVHNTKMGIAMRAVSQNLN 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + FA+ S+ AG I M + +LGG+ Sbjct: 178 AARLMGINPDKIISFTFALGSSLAAAAGVLVGTYYTAID-PMMGLLFGLKAFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L L F + F L +++++ Sbjct: 237 GSIPGAMFGGIVLGLAEVLGVAFISPSFRDAIAFG-------------ILIFILIVKPTG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|73537495|ref|YP_297862.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72120832|gb|AAZ63018.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 287 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 91/305 (29%), Gaps = 27/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A GL++V G L + + Y GAY L + +G++ WL + Sbjct: 8 ILNGLTLGGVYSLVALGLTLVYGILHVPNFAHGAFYMAGAYVSYFLMTSFGVNYWLAMVG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A++ M+ + + +I + L G + Sbjct: 68 AAVVVAMLSMLADRLVFHPLRNAPELHDMIAAIGILLFLEAGAQALWGADFHRMPTP--- 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +++ L + L+L RT + N++ Sbjct: 125 ---------YGQVVDLFGLTAPLQRLLIIVAAFALMVLLHLFLTRTMTGATIMAMAQNRE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + L FA+S A +A +A + I+ILGGM Sbjct: 176 GAALVGIDATRVTLLVFAISGALAAIAATLYAP--INLVYPSMGNLVITKAFVIIILGGM 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + L +++ +R Sbjct: 234 GSIPGAIAGGLIIGMAESFGGFYVS-------------TDYKDIIAFVLLVVILSIRPQG 280 Query: 339 LLRLR 343 L + Sbjct: 281 LFAGK 285 >gi|256111434|ref|ZP_05452454.1| branched-chain amino acid ABC transporter, permease protein [Brucella melitensis bv. 3 str. Ether] gi|265992936|ref|ZP_06105493.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] gi|262763806|gb|EEZ09838.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] Length = 328 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 116/327 (35%), Gaps = 27/327 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + ++ + ++ +I+ + L +V G G+ +L + Sbjct: 16 AGLIGIVAIIAASVVGWFLFPDNLALLTRIIAIALLVLSLDLVTGYCGIATLGHAALFGA 75 Query: 77 GAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY I + + L+ + + G++ G L+ G + ++ + +F Sbjct: 76 GAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATGLAQLVLSIAVVHLFHE 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 K T G G+ G F +Y +Y + + +S Sbjct: 136 AANKASGWTGGSDGLSGISPDPIFGI------------FEFDLYGRTVYIYAVILLLISF 183 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + ++ R+ R ++++ ++ ++ A+L + +S A G++GA A S Sbjct: 184 IFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISGAVAGISGALNAISTQV 243 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + D F+ + + +++LGG SL T + + ++ N +++ Sbjct: 244 VGLDSLSFTMSAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVSTANPFHW--------- 294 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 T++ L V+L L Sbjct: 295 -----LTMVGALLIAVVLFAPRGLYGT 316 >gi|126731166|ref|ZP_01746974.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] gi|126708468|gb|EBA07526.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] Length = 393 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 101/367 (27%), Gaps = 36/367 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + L L + + G + L + A + +V G G+LSL Sbjct: 20 WFIALLGLFTLVVTVTSEAFGTGLVSTSFVKTLGKTLCLCLIAIAMDVVWGYCGILSLGH 79 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGLP 113 + IG Y+ + + S + Sbjct: 80 FAFFGIGGYAIGMWLMYARTETIVARSMSNQIIPPTGQEISDAIASQIFGVVGASEFPPI 139 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L + +I+ ++ W + G+Y++ + + + Sbjct: 140 WAFAHSLPLQLLMVIVVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDSG 199 Query: 174 SSFV------------------IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + I+ + L + ++ + + R IRD Sbjct: 200 LRGNNGLSGLQNIPGATDVPQSVISIYFLWASALALGLGYVLFAFVTSGKMGSVIRAIRD 259 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ L + KL F +++ G+AGA + ++P +I + V + Sbjct: 260 DERRVRFLGYHVESYKLFVFTLTAVVSGIAGALYYPQAGIVNPAEIAPIASIYLAVWVAI 319 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L T + + G N + + L+ + V L Sbjct: 320 GGRGRLYGAVLGTVFVTLLSSWFTGGGAPDINLGF-YTVKWTDWWLVLLGFSFVAVTLFA 378 Query: 336 SHSLLRL 342 L L Sbjct: 379 PQGLGGL 385 >gi|123440623|ref|YP_001004617.1| branched-chain amino acid transporter permease subunit LivH [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332159856|ref|YP_004296433.1| branched-chain amino acid transporter permease subunit LivH [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122087584|emb|CAL10365.1| high-affinity branched-chain amino acid transport system, permease protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318607599|emb|CBY29097.1| high-affinity branched-chain amino acid transport system permease protein LivH [Yersinia enterocolitica subsp. palearctica Y11] gi|325664086|gb|ADZ40730.1| branched-chain amino acid transporter permease subunit LivH [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862611|emb|CBX72764.1| high-affinity branched-chain amino acid transport system permease protein livH [Yersinia enterocolitica W22703] Length = 308 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y I +Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMVGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGSAFLVSIVIASTYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLNQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGIAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|300309519|ref|YP_003773611.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300310521|ref|YP_003774613.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300072304|gb|ADJ61703.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] gi|300073306|gb|ADJ62705.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 309 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 97/305 (31%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G L L++ +GA + L L + Sbjct: 8 IINGLVLGSMYALIALGYTMVYGVLNLINFAHGDILMVGAMVGLSLLKVVQQVAPGLPGI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ G I + + +A L + ++ + + Sbjct: 68 VQLVIAIVGAIPVCIVVSLLIERIAYRPLRNAPRLAPLITAIGVSILLQTLAMMIWGRS- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + + +L ++L + +T + A R +N + Sbjct: 127 -PLPFPQVMPSDPVHIAGALISPTQIMLLALAVLAMVGLVLIVEKTKMGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ + +AG +AA+ M F + S +LGG+ Sbjct: 186 IAGLMGVDANKVIVVTFAIGAGLAAIAGVMWAANYSTAQFAM-GFVPGLKAFSAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + L G + L + I L +V+ +R Sbjct: 245 GNIYGAMLGGILLGLIESLGAGYIGDLTGNFLG-----SNYQDIFAFIVLIIVLTLRPSG 299 Query: 339 LLRLR 343 ++ R Sbjct: 300 IMGER 304 >gi|160936372|ref|ZP_02083741.1| hypothetical protein CLOBOL_01264 [Clostridium bolteae ATCC BAA-613] gi|158440655|gb|EDP18393.1| hypothetical protein CLOBOL_01264 [Clostridium bolteae ATCC BAA-613] Length = 553 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 31/318 (9%), Positives = 83/318 (26%), Gaps = 9/318 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y I+ + + + + I ++ Q + A G++ ++ G L+ Sbjct: 230 YIAIILIFIGLCIAAPVMKNVKLLTYNNILNILQQASPRMFLALGVAGLILLTG-TDLSI 288 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G + I+ + + + V G+ + + L + Sbjct: 289 GRMVGMGMTTATIIMHQGINTGAVFGHVFDFTGMPIGLRVVFALVM--CIILCTCFTAIG 346 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F I+ + + + + V P + ++L Sbjct: 347 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIEPAIPKMIIPKINGFPTIILWA 406 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + +T + N +A ++ + AF ++ G Sbjct: 407 VAAIVIVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFGVTMGAFILAGILYGFGSWLEC 466 Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304 A + + I+ ++ GG+ +S + I ++ + Sbjct: 467 ARMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVLIFTVLIYSLTILGID 526 Query: 305 YFNSLLKFDCSFNMRHTT 322 + T Sbjct: 527 TNLQFVFEGIIIITAVTL 544 >gi|218903088|ref|YP_002450922.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|218538529|gb|ACK90927.1| branched-chain amino acid ABC transporter, permease protein [Bacillus cereus AH820] Length = 333 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 129/325 (39%), Gaps = 31/325 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V L+ + + + QI I+ +FA +++G G++S + + IGAY Sbjct: 15 VCMLICLSVFPFVNDSRSLLILFTQIFIFXIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74 Query: 81 YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 +L R + ++ I + +IS I+GL SL+ + + A+ TL +S++F + Sbjct: 75 VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T+G G F YYV L + + Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +++I + I N++ +L ++ K+ A V+ ++G F + ++ Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 +F + + + ++GG+ +L + + Y+ S L + Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 R T ++ + +V+L+ L+ Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311 >gi|239617487|ref|YP_002940809.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1] gi|239506318|gb|ACR79805.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1] Length = 307 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 96/313 (30%), Gaps = 18/313 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + +Y + A G ++V G L L++ + + Y + L WL Sbjct: 2 QNFVNGLSLGSLYALIAIGYTMVYGILRLINFAHGDVFMMSVYFAFYFVTIGKLPWWLSF 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + + G + + K + ++ LI + L + + Sbjct: 62 ALAILGAALLGFAIDRVAYKPIRNAPRVSALITAIGVSFFLESLAVVVFSGIPKSFRNIY 121 Query: 157 YFLGTTV------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + + + + + L+ + + + RT I A Sbjct: 122 PNFLNKMIIIGGHEEIKYGRKVIMGGLRFPLVSLVTLIITGIILVILWWIIYRTKIGMAM 181 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + + + + FA SA + G +A+ +I P M F + Sbjct: 182 RAVSVDIPTTALMGINVDNVIGFTFAFGSALAAIGGLLWASRYPQIWPYM-GFMPGLKAF 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + GG+ S+ +L + G+ S L + Sbjct: 241 IAAVFGGIGSIQGAVIGGLLLGLTEIMLVGIFP-----------SLAGYRDAFAFFILII 289 Query: 331 VILMRSHSLLRLR 343 ++ ++ + LL + Sbjct: 290 ILSLKPNGLLGKK 302 >gi|294812034|ref|ZP_06770677.1| Branched-chain amino acid ABC transporter permease [Streptomyces clavuligerus ATCC 27064] gi|294324633|gb|EFG06276.1| Branched-chain amino acid ABC transporter permease [Streptomyces clavuligerus ATCC 27064] Length = 329 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 105/305 (34%), Gaps = 7/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ + IG + + + + L + + Sbjct: 27 LANGLALGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTIYVWLPSGVSLAVAI 86 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 MI G +G+ + R Y L + ++ + ++ Sbjct: 87 PLMIIGGAIAAVGVATAAERFAY---RPLRGAPRLAPLITAIGLSIALQQLVWGFYPDAK 143 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ + +VL+ ++ L++ ++ A + + Sbjct: 144 KHKSFPEFTGDAFRITDDLLIQRADAFVLILAPLCMLALGLFVSKSRSGRAMQATAQDPD 203 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + AFAV +AF +A + + +I+ +M F + + +LGG+ Sbjct: 204 TAKLMGINTDRIIVMAFAVGAAFAAVAAVAYGLDKGQINFEM-GFILGLKAFTAAVLGGI 262 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L L +++ +++I + LV R Sbjct: 263 GNIYGAMVGGVVLGLAESLSIAYIEDIPGMSQLGGGAWSNVWAFVLLILVLLV---RPQG 319 Query: 339 LLRLR 343 LL R Sbjct: 320 LLGER 324 >gi|239816118|ref|YP_002945028.1| urea ABC transporter permease [Variovorax paradoxus S110] gi|239802695|gb|ACS19762.1| urea ABC transporter, permease protein UrtC [Variovorax paradoxus S110] Length = 401 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 105/329 (31%), Gaps = 36/329 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + ++ + L Y A GL +V G G+LSL + + IG Y+ + Sbjct: 33 DIFRLNLVGKYLTYAFVAVGLVMVWGYGGVLSLGQGVFFGIGGYAMAMFLKLEASDPVTT 92 Query: 96 IPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + L F+ L++A ++++ + L+ + G+ Sbjct: 93 KIQSTPGIPDFMDWNQITELPALWLPFKSLPLSLALVVLAPMALAWLVSFAMFKRRVGGV 152 Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 Y A + L + + + +YYV +G+ Sbjct: 153 YFAIITQAVALICTVLIIGQQGYTGGVNGMTDLKTMLGWDTRTDGAKYVLYYVCVGLLVA 212 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 S + W++ + + +RD + + K+ F +++ G+ GA FA Sbjct: 213 SIVLCRWIQTSKLGTLLLAMRDKEDRVRFSGYDVSNFKVFIFCLAAGLSGIGGAMFALQV 272 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG SL ++ L F Sbjct: 273 GFMSPSFVGIVPSIEMVIFCAVGGRMSLVGAVYGALLVNAGKTL--------------FS 318 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 SF LM V + L L Sbjct: 319 ESFPDLWLFLMAGLFIGVTMAFPMGLAGL 347 >gi|166032302|ref|ZP_02235131.1| hypothetical protein DORFOR_02005 [Dorea formicigenerans ATCC 27755] gi|166028025|gb|EDR46782.1| hypothetical protein DORFOR_02005 [Dorea formicigenerans ATCC 27755] Length = 550 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 33/328 (10%), Positives = 87/328 (26%), Gaps = 9/328 (2%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ F + Y I+ + + + + + I ++ Q + A G++ ++ Sbjct: 217 MTQFLYKNGLYIVIILIFIALCIITPIVKNTQLFTVTNILNILQQASPRMFLALGVAGLI 276 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G L+ +G + I+ + + G I Sbjct: 277 LLTG-TDLSVGRMVGMGMVTATIIMHNGINTG--GVFGHIFDFSNMGTIPKALLALGVCI 333 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 L +++ F I+ + + + + V P+ F+ Sbjct: 334 ILTTVFAMIAGFFMARFKMHPFISTMANMLIIFGLVTYATKGVSFGAIDPAIPNIFIPKA 393 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 ++L + +T + N +A ++ + AF ++ Sbjct: 394 GRFPMIILWAIIAVVVVWFIWNKTTFGKNLYAVGGNPEAATVSGISVFKVTMGAFIMAGI 453 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGV 294 G + ++ I+ ++ GG+ +S + I + Sbjct: 454 LYGFGSWLECLRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVLIFTSL 513 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + T Sbjct: 514 TYSLTILGIDTNLQFIFEGIIILAAVTL 541 >gi|238789418|ref|ZP_04633204.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia frederiksenii ATCC 33641] gi|238722561|gb|EEQ14215.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia frederiksenii ATCC 33641] Length = 308 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y I +Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMMGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGSAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|292670002|ref|ZP_06603428.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas noxia ATCC 43541] gi|292648303|gb|EFF66275.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas noxia ATCC 43541] Length = 294 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 88/303 (29%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G + L++ Y +GAY + + ++ Sbjct: 11 LINGISLGSIYALIALGYTMIYGIIKLINFAHGDIYMVGAYLGFYAITLGIPVLPAILIS 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+ S ++ R + + + + Sbjct: 71 MAVTSLLGVLVERFAYRPLRHAPRISVLITAIGMSFLLE------------YVTMAIVSP 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + I F + +I ++ L + +R T I A R + + Sbjct: 119 TPRTFPATISDISFDVAGLIISGQQLLIMGVTLVLMLILTYIVRSTKIGKAMRAASYDTE 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + FA+ SA +AG + I P M I + GG+ Sbjct: 179 AAQLMGINADRIISITFAIGSALAAVAGVLIGIYYNAIDPLM-GLMPGIKAFVAAVFGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L +L V G F F F L LV+L+R Sbjct: 238 GILPGAVVGGLVLGIVEAFISGFGFSMFRDAAAF-------------AILILVLLVRPAG 284 Query: 339 LLR 341 + Sbjct: 285 IFG 287 >gi|56477220|ref|YP_158809.1| putative amino-acid transmembrane ABC transporter protein [Aromatoleum aromaticum EbN1] gi|56313263|emb|CAI07908.1| putative amino-acid transmembrane ABC transporter protein [Aromatoleum aromaticum EbN1] Length = 310 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 109/305 (35%), Gaps = 7/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y + A G ++V G LGL++ +GA + + + + P+ Sbjct: 8 LVNGLVVGSVYALVALGYTMVYGILGLINFAHGDLVMVGAMTALQTMLFLMGAAPGMSPL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + I L + + LA L + LI ++ I + Sbjct: 68 AMLTLSLAVAIPVCMLLGYTMERLAYRRLRNAPRLAP-LITAIGMSFLLQTIAMMLWGRN 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + + P + V +++G + A++I+ + +T + A R +N + Sbjct: 127 YHTFPQLVSTVPLQPVAGVFVTPIQVTIVVGSALIMAALIVLVTKTRLGRAMRATAENHR 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + +A +AG +A++ I+ F + + +LGG+ Sbjct: 187 VAALMGVDTNLIIALTFVIGAALAAVAGVMYASNYG-IAHYGMGFMPGLKAFTAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L V G + + F + I L LV++ R Sbjct: 246 GNLGGAMLGGIVLGLVESFGAGYIEH-----MTFGLLNSSYQDIFAFIILGLVLIFRPTG 300 Query: 339 LLRLR 343 LL R Sbjct: 301 LLGER 305 >gi|325972318|ref|YP_004248509.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy] gi|324027556|gb|ADY14315.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp. Buddy] Length = 392 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 86/314 (27%), Gaps = 18/314 (5%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + L V+ LF S + ++ A G++ V+ G + L+C Sbjct: 21 LAPLALVIIYAFFALFGRNFFSYTTLVNILDSSYYIGFIAIGVTFVI-ITGGIDLSCGTI 79 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +G +WL + + ++S + G+ G+ + + M Sbjct: 80 MMASTIIGGTAYKTWGWPMWLSLVLILLVSTSFGLFNGILVSRLKLPPFIATLGTMMISL 139 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 G I R + F L + Sbjct: 140 ------------GIGSIVSNVRSATFPARGAADSWFKGIFKYIAPDNASYPTGALVLFGT 187 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + L RT + + N++A + ++ A+ +S G+ G FAA Sbjct: 188 AFIAYIILTRTKMGRYIFAVGSNKEAARLSGVDVAKWEMMAYVISGFLAGVGGIAFAAVY 247 Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + P + E + VI GG S+ I+ + M+ Sbjct: 248 TTVMPAQGQGFELYAIAGTVIGGTSLSGGAGSVLGTMIGVYIMSVLRAGLPSMDLQAQYQ 307 Query: 309 LLKFDCSFNMRHTT 322 Sbjct: 308 TFFTGIVVLGAVML 321 >gi|310816777|ref|YP_003964741.1| branched-chain amino acid ABC transporter, permease protein [Ketogulonicigenium vulgare Y25] gi|308755512|gb|ADO43441.1| branched-chain amino acid ABC transporter, permease protein [Ketogulonicigenium vulgare Y25] Length = 650 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 101/321 (31%), Gaps = 26/321 (8%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-- 87 +G + IY + A GL+I G +G++++ +GAY+ ++ Sbjct: 351 VGLFQVADISLDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTAYVVQLFIP 410 Query: 88 -YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 Y +++ + +P + +++ G+ + + + TL+ + L + I G Sbjct: 411 DYTVALIVALPAAFLVAAIAGIALERLVI-RHLANRPLETLLATFGISIALQQLTKIIFG 469 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 V S + + + + + A +++ L RT + Sbjct: 470 TQARPVTAP---------SWLSGAWIYNDVLGISWIRIAIFVLALVFLALLLVILNRTRL 520 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R + N S+ K+ F + S G+AG S + Sbjct: 521 GLEIRAVTQNPGMAASMGINPDRVKMLTFGLGSGIAGIAGVGIGLYAQVTSEMGSNYIVQ 580 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + +V + ++ ++ + + N + + F + Sbjct: 581 SFMAVVVGG--VGNVWGTLAGATLIGVMQKGIEWFNPSNTLAAQTYMILFIIIFIQF--- 635 Query: 327 ALFLVILMRSHSLLRLRTPSN 347 R ++ L+ + Sbjct: 636 --------RPRGIVALKGRAA 648 >gi|300312238|ref|YP_003776330.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075023|gb|ADJ64422.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 288 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 116/269 (43%), Gaps = 27/269 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 +++ I + M A + + + S GLLSL IGAY+ +L ++ + + + Sbjct: 11 YNTVIFSIGVNAMLALSIYVTL-SCGLLSLANAAFMGIGAYTASLLTMQFEMPFPIALAA 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ +++G+P+L+ G YLA+ATL E+ + I++ IT G G+ + Sbjct: 70 GGVLPALVALVIGIPTLRLSGVYLAMATLGFGEVVRVIVLNL-DITGGPMGLNGVPPITE 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + ++ ++ LRR+ I A+ I++++ Sbjct: 129 WWH-------------------------IVLLLGVTIYVLARLRRSKIGRAFEAIKEDEI 163 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + KL AF + +A G+AG A I P+ + F + ++++ + GG Sbjct: 164 AARLMGVNVAGYKLLAFVIGAAIAGVAGGLNAHFTFTIGPNNYGFENAVDILTMAVFGGT 223 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFN 307 ++L + IL + E+ + Sbjct: 224 SNLIGPMIGSTILSLLPEVLRHFKDFRLA 252 >gi|269127445|ref|YP_003300815.1| urea ABC transporter permease protein UrtC [Thermomonospora curvata DSM 43183] gi|268312403|gb|ACY98777.1| urea ABC transporter, permease protein UrtC [Thermomonospora curvata DSM 43183] Length = 368 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 94/317 (29%), Gaps = 27/317 (8%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-------L 90 + + L + + A G+ + G G+L+L + + +G Y+ + + Sbjct: 33 FRLDELAKYLCFAIAALGIGLAWGQGGMLTLGQGVFFGLGGYAMGMYLKLHDAGGELPDF 92 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 +W + + + + A L Q + + I + Sbjct: 93 MVWSGVEELPALWAPFRNPVIALAAVVVLPVTVAALLGALVFRQRVRGAYFAILSQALAA 152 Query: 151 YVA------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 L + + FF F + +Y+V + + + L ++ Sbjct: 153 AFVILLVGQQGLTGGTNGLTNFYDFFGFELEAESTQRGLYFVTAVVLGVLYLLARQLVKS 212 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 +RD + L K FA+S+ G+AGA F ISP + Sbjct: 213 RFGRLLIAVRDGEDRVRFLGYNPATVKTITFAISAGMAGLAGALFVPVAGIISPSLLGVV 272 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 ++ ++ V +GG +L+ ++ F + L Sbjct: 273 PSLELVVAVAIGGRYALAGAILGAIVM--------------NYGKTAFSEEWAGGWLYLQ 318 Query: 325 VIALFLVILMRSHSLLR 341 V+ + + Sbjct: 319 GALFIGVMTLAPKGAIG 335 >gi|224541725|ref|ZP_03682264.1| hypothetical protein CATMIT_00897 [Catenibacterium mitsuokai DSM 15897] gi|224525329|gb|EEF94434.1| hypothetical protein CATMIT_00897 [Catenibacterium mitsuokai DSM 15897] Length = 290 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 100/303 (33%), Gaps = 27/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G +++ GAY +I + I Sbjct: 8 IINGLSTGSMYALVAIGYTMVYGIAKMINFAHGDIIMAGAYFALIAM--GFVGPIPAILF 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + + A G+I + K ++ LI + +L + G A Sbjct: 66 SIVATAALGVITEKVAYKPLRGKGSLEVLITAIGVSYLLENVFLLIFGSA---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T ++ + + L+ +A ++ ++ +T + A R + ++Q Sbjct: 116 -ARTFPQIMPKGTINLGGISIKYITVITLVVTAVCTAVLLFFINKTKLGKAMRAVSEDQG 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +AG + + I+P I +LGG+ Sbjct: 175 AAQLMGINVNTTVSLTFAIGSGLGAIAGVIYGCAYSLITPY-IGLMLGIKAFIAAVLGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L L F+ ++ L +V+L++ Sbjct: 234 GSVPGAMVGGLMLGVAESLTIAYISSDFSDA-------------VVFAILIIVLLVKPAG 280 Query: 339 LLR 341 L Sbjct: 281 LFG 283 >gi|238750719|ref|ZP_04612218.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia rohdei ATCC 43380] gi|238711109|gb|EEQ03328.1| High-affinity branched-chain amino acid transport system permease protein livH [Yersinia rohdei ATCC 43380] Length = 308 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 86/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGSAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ +++R + + A R ++ Sbjct: 132 ALPSLVTGQWTLGEANGFAATISTMQLTIWIVTFLAMLALTIFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGIAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|239820782|ref|YP_002947967.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239805635|gb|ACS22701.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 352 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 120/327 (36%), Gaps = 33/327 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 LA L+L + ++I Y +FA +++ G G++S+ + Sbjct: 20 IALAAGTALVLIAASLPLWGEPSWMREFVEIACYFIFAMMWNLLAGYGGMVSIGQQAFFG 79 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 G Y ++LG+ ++ ++ +P+ A+ +G + + + + G Y AI T +++E+F+ Sbjct: 80 FGGYVMLMLGNFADVNPFVAVPLGALAAGLIAVPVSFVAFRLSGGYFAIGTWVIAEVFRL 139 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G A R E Y++ L + Sbjct: 140 SFANVSAVGGGSGTTLTALR-----------------GIERTTRERTTYWMALACVVAAV 182 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +++ R+ A IRDN+ A S + KL+ + V++ G+AGA + R Sbjct: 183 ALVYLFLRSKRGLALLAIRDNEVAAESQGVPVARMKLAVYVVAAFGAGLAGALYFVGNLR 242 Query: 256 ISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISPD F + I +V++GG+ + + + + +Y Sbjct: 243 ISPDAAFSVNWTAFAIFMVVIGGIGRIEGPLVGALVFWALNKFLSDYGTWYLLG------ 296 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + + V L L Sbjct: 297 ---------LGLLAICVTLFFKQGLWG 314 >gi|152968877|ref|YP_001333986.1| high-affinity branched-chain amino acid ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206579856|ref|YP_002240185.1| branched-chain amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|238893285|ref|YP_002918019.1| ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|262042363|ref|ZP_06015525.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288936930|ref|YP_003440989.1| inner-membrane translocator [Klebsiella variicola At-22] gi|330006821|ref|ZP_08305708.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Klebsiella sp. MS 92-3] gi|150953726|gb|ABR75756.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206568914|gb|ACI10690.1| branched-chain amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|238545601|dbj|BAH61952.1| ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040271|gb|EEW41380.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288891639|gb|ADC59957.1| inner-membrane translocator [Klebsiella variicola At-22] gi|328535735|gb|EGF62178.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Klebsiella sp. MS 92-3] Length = 299 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 101/291 (34%), Gaps = 11/291 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GA+S + L S GL + + + Sbjct: 10 VVNGMSLGGMYALIAIGYTMVYGVLRLINFAHADVMMVGAFSTLFLFSSVGLPFGVAVFL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G GM++ + + I+ LI + L + G + + + +F Sbjct: 70 TLGLCGLFGMLIDRVAYRPLRQASKISMLITAIGVSFFLENLFNVLFGGSSRFFSAPDFF 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T VI + V L L +I+ L RT A R + + Sbjct: 130 NQTR----------AFGSVIITNVAWIVPLITVLLLLAILWLLYRTRYGMAIRAVAFDVN 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ S+ + G F++ S I P M + + +LGG+ Sbjct: 180 TVRLMGIDANRIISLVFALGSSLAALGGVFYSISYPTIDPLM-GVLIGLKAFAAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 S++ IL + + F F + + + Sbjct: 239 GSVTGAVLGGFILGFTEVVAVAIFPELGGYKDAFAFLFLILVLLFRPVGIM 289 >gi|270264295|ref|ZP_06192562.1| transporter [Serratia odorifera 4Rx13] gi|270041944|gb|EFA15041.1| transporter [Serratia odorifera 4Rx13] Length = 308 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMLGIDVGWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGAAFLVSIVIASAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ L++R + + A R ++ Sbjct: 132 ALPSLVTGQWVLGESNGFAATISTMQLIIWVVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMIGGLVLGVAEALTSAYLSTEYKDVVSF-------------ALLIVVLLIMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|302533851|ref|ZP_07286193.1| urea ABC transporter, permease UrtB [Streptomyces sp. C] gi|302442746|gb|EFL14562.1| urea ABC transporter, permease UrtB [Streptomyces sp. C] Length = 309 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 100/307 (32%), Gaps = 12/307 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLI 96 + + + +Y + A G ++V G + L++ + G + V L G ++WL + Sbjct: 8 LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMTGGFGALTVWLMLPTGTTMWLAL 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P+ + + ++ + + +F L A + LI ++ A Sbjct: 68 PLMLIGAVIVATLIAVGAERFAYRPLRSAPRLAP------LITAIGLSIVLQQAVWAWYP 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + I F + + +++L A + ++++T + + Sbjct: 122 DAKSSVKFPEIPGGPFHLGSITIQTGDIFLVLAAPISMAFLGFFVKKTRTGRGMQATAQD 181 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + AFA+ +AF + + + M F + + +LG Sbjct: 182 PDTAKLMGINTDRIITIAFALGAAFAAVGAVAYGLKYGEVQYRM-GFILGLKAFTAAVLG 240 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ +L L S+ +++I + L R Sbjct: 241 GIGNIYGAMVGGLVLGLAETLTTAYIADVPGMSQLGGQSWGNTWAFVLLILVLL---FRP 297 Query: 337 HSLLRLR 343 L+ R Sbjct: 298 QGLMGER 304 >gi|306845722|ref|ZP_07478291.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO1] gi|306274043|gb|EFM55870.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO1] Length = 328 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 123/343 (35%), Gaps = 28/343 (8%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ + L + L + ++ +G + ++ +I+ + L +V Sbjct: 1 MTEMTQPLPQTRPSYAGLIGIVAIIAASIVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G G+ +L + GAY I + + L+ + + G+I G L+ G Sbjct: 60 GYCGIATLGHAALFGAGAYGAGIAAAHFGITDPILMTVIGLLAGAVTGLISGAVILRATG 119 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 + ++ + +F K T G G+ G F +Y Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 +Y + + +S + ++ R+ R ++++ ++ ++ A+L + +S Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 A G+ GA A S + D F+ + + +++LGG SL T + + ++ Sbjct: 228 AVAGIGGALNAISTQVVGLDSLSFTMSAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVS 287 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 N +++ T++ L V+L L Sbjct: 288 TANPFHW--------------LTMVGALLIAVVLFAPRGLYGT 316 >gi|33599590|ref|NP_887150.1| putative branched-chain amino acid transport system permease protein [Bordetella bronchiseptica RB50] gi|33567186|emb|CAE31100.1| putative branched-chain amino acid transport system permease protein [Bordetella bronchiseptica RB50] Length = 298 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 127/325 (39%), Gaps = 37/325 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + + L YI ++ + + + + A L V+ +G L+ + IG Sbjct: 7 LVFILFIAAVLVGCIALGSGYIGNLVVWMSVAAVMATSLRFVL-LIGELNFATAAFFGIG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY + + L +L++ +SA+++ A ++ G +LK +G Y + +E + + Sbjct: 66 AYCTGYIANYLDLPFFLILALSALLALAVSVVFGCITLKVKGPYFLLIGFAFTEALRILY 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + G +G+ +L +Y +CF Sbjct: 126 TR-TDVLGGNSGLVGIFPPIWLEAH--------------------YHYFATVLCFALIVA 164 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L++ R+ + + IRDN+ SL + K+ FAV+SA G+AG+ A + + IS Sbjct: 165 LLFVERSNLGKVFVAIRDNENVVRSLGIPVFMTKVLCFAVASAVAGLAGSVHAYASNVIS 224 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F F + ++ + +GG S +L+G+ + Sbjct: 225 PLDFGFMLSTFALAYLKVGGEDSPLGPIIGAVLLVGIASYAQTLGG-------------- 270 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 L +A+ + +L L+ L Sbjct: 271 -NEHILYGLAIIVSVLFMPKGLMGL 294 >gi|328545162|ref|YP_004305271.1| branched-chain amino acid ABC transporter permease [polymorphum gilvum SL003B-26A1] gi|326414904|gb|ADZ71967.1| Branched-chain amino acid ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1] Length = 353 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 +I I+++ +++G G++S + + IGAY + S G Sbjct: 31 PFLFPGTKPLETAARICIFIVLVASYDMLLGYTGIVSFAHTMFFGIGAYGTALALSSAGP 90 Query: 91 SI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 S A ++ + +GL SL+ + + A+ TL ++ F ++ + +T G+ Sbjct: 91 SFVSILWGSAAGAGVAATLALAIGLFSLRVKAIFFAMVTLAIASAFAVLVSQLSHLTGGE 150 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ R F + YY++ G+ +L + + Sbjct: 151 DGLNYRIPRELTPAFRLVEERVFGVRIDG---RVLSYYLVFGVSLALFLAMLRIVNSPFG 207 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSEN 266 + +RDN ++ +++ + +A +S+ +AG+ A P Sbjct: 208 RTLQAVRDNAFRAEAIGYRVVWYRTTATVLSAVMAALAGSLLALWLRYTGPATTLSMEIM 267 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD----CSFNMRHTT 322 I ++ +V++GGM ++ + I + + R Sbjct: 268 IDILLMVVIGGMGTMYGAVIGATLFILAQTYLQDLMGAAEKATSAVPLVSMLIAPERWLL 327 Query: 323 LMVIALFLVILMRSHSLLRL 342 + + L + ++ Sbjct: 328 WLGVLFVLSVYFFPAGVVGR 347 >gi|290961244|ref|YP_003492426.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260650770|emb|CBG73887.1| putative ABC transporter integral membrane subunit [Streptomyces scabiei 87.22] Length = 310 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 101/308 (32%), Gaps = 13/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---SYVILGSRYGLSIWLL 95 + + + +Y + A G ++V G + L++ + +G + + + G S+W+ Sbjct: 8 LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMVGGFGALTMYLYVLPDGTSMWVA 67 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 +P+ + +++ + + +F L A + LI ++ A Sbjct: 68 LPLMLIGGILVAVLVAVGAERFAYRPLRTAPRLAP------LITAIGLSLALQQAVWAWY 121 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 I F V + ++LL A + ++ +T + Sbjct: 122 PNARSAITFPQIEGGPFQIGNVTIQTGDIFLLLAAPISMAILAYFVMKTRTGRGMQATAQ 181 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + AFA+ +AF + + + M F + + +L Sbjct: 182 DPDTAKLMGINTDRIIVVAFALGAAFAAVGSVAYGLKYGEVQFRM-GFILGLKAFTAAVL 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ ++ +L L S+ +++I + LV R Sbjct: 241 GGIGNIYGAMLGGLVLGVAEALSTAYISDIPGMDQFGSQSWANVWAFVLLILVLLV---R 297 Query: 336 SHSLLRLR 343 LL R Sbjct: 298 PQGLLGER 305 >gi|114762283|ref|ZP_01441741.1| branched-chain amino acid ABC transporter, permease protein [Pelagibaca bermudensis HTCC2601] gi|114544901|gb|EAU47905.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. HTCC2601] Length = 295 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 91/306 (29%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIP 97 + + + ++ + A GL+++ G + +++ +G Y +L + + +L Sbjct: 8 VANGLMLGGLFAIVAVGLTLIFGIVKVINFAHGEFLMVGMYLTFLLSTGMDVHPYLTAAA 67 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 V+ + + L + + L+ + G Sbjct: 68 VAPALFVLGALTQRLLIQPLMSARDEHVQIFATVGLSTALMNLALLVFGADIANTPAHGV 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + +V L + L++++T A R N+ Sbjct: 128 RSQVMLGEVRILTG-----------QLWVFGAAILLVIGLQLFMKKTRTGRAIRATAQNR 176 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A + F + F + +A +G+ + A F I V+LGG Sbjct: 177 AAARLMGINDKFIYILTFGLGAACVGLGSSLIAPLYPTSPTIGTYFVL--IAFVCVVLGG 234 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ ++ V L + ++ L+++++ Sbjct: 235 LGSIPGAFFGALVIGLVDALSGFYIG-------------SDLREAVVFTIFLLILILKPS 281 Query: 338 SLLRLR 343 L R Sbjct: 282 GLFGTR 287 >gi|70728679|ref|YP_258428.1| branched-chain amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68342978|gb|AAY90584.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 307 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 86/290 (29%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIAIAGLAMMGLDSVPL 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + + I I + + Sbjct: 71 LMTAAFIASIVVTSAYGYSIERIAYRPLRGSNRLIPLISAIGMSIFLQNTVLLAQDSKDK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + + V+ V + + L++ R+ + A R ++ Sbjct: 131 SIPNLIPGNFSIGPGGAHEVLISYMQIVVFVVTLIAMLGLTLFISRSRLGRACRACAEDI 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A + I+P+ F + + +LGG Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAIAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ +L + + ++ F + I Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADVFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|62290657|ref|YP_222450.1| branched-chain amino acid ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|82700571|ref|YP_415145.1| inner-membrane translocator [Brucella melitensis biovar Abortus 2308] gi|254694437|ref|ZP_05156265.1| High-affinity branched-chain amino acid transport system permease protein LIVH [Brucella abortus bv. 3 str. Tulya] gi|254698096|ref|ZP_05159924.1| High-affinity branched-chain amino acid transport system permease protein LIVH [Brucella abortus bv. 2 str. 86/8/59] gi|254730980|ref|ZP_05189558.1| High-affinity branched-chain amino acid transport system permease protein LIVH [Brucella abortus bv. 4 str. 292] gi|256258200|ref|ZP_05463736.1| High-affinity branched-chain amino acid transport system permease protein LIVH [Brucella abortus bv. 9 str. C68] gi|260547106|ref|ZP_05822844.1| high-affinity branched-chain amino acid transport system permease LIVH [Brucella abortus NCTC 8038] gi|260755481|ref|ZP_05867829.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870] gi|260758704|ref|ZP_05871052.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|260762538|ref|ZP_05874875.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] gi|260884501|ref|ZP_05896115.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68] gi|62196789|gb|AAX75089.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82616672|emb|CAJ11755.1| Bacterial inner-membrane translocator [Brucella melitensis biovar Abortus 2308] gi|260095471|gb|EEW79349.1| high-affinity branched-chain amino acid transport system permease LIVH [Brucella abortus NCTC 8038] gi|260669022|gb|EEX55962.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|260672964|gb|EEX59785.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] gi|260675589|gb|EEX62410.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870] gi|260874029|gb|EEX81098.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68] Length = 302 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 103/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 8 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G C + + + +A LI + L + +T G Sbjct: 68 LMLLLMMIVAMLLTGLCSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S V + V++ L + RT++ A Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 284 IVLIFMPSGILGR 296 >gi|309779226|ref|ZP_07673989.1| amino-acid transmembrane lipoprotein ABC transporter [Ralstonia sp. 5_7_47FAA] gi|308922030|gb|EFP67664.1| amino-acid transmembrane lipoprotein ABC transporter [Ralstonia sp. 5_7_47FAA] Length = 293 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 109/303 (35%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y +FA G ++V G LG+++L+ + +GAY+ + + + L +W + V Sbjct: 6 LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQVVLHFELPLWAALAV 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++SG G+I+ + L + +I Sbjct: 66 GFVVSGVAGLIIDVL--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L+ + +++ L A+++L L+RT + A R I ++ K Sbjct: 118 NLRFPAGLVSDASLDLGGIHLTPLELSIIVLSFALMAALMLLLKRTQLGRALRAIAESPK 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L + L ++A G++G + + P M + + + +++ILGG+ Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLSGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L L + F LFL++L+R Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|315504689|ref|YP_004083576.1| inner-membrane translocator [Micromonospora sp. L5] gi|315411308|gb|ADU09425.1| inner-membrane translocator [Micromonospora sp. L5] Length = 316 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 87/306 (28%), Gaps = 20/306 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY------GLSIWLLI 96 Q IY + A G ++V G L L++ + GA++ + + + +S I Sbjct: 18 LTQGAIYALVALGYTLVYGVLRLINFAHSEVFIAGAFAAIWTWNGFGLDQNSQVSGIGSI 77 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +++ I + + LI + + + Sbjct: 78 MFYLLVAMIVAAIASAGTATVIERVAYRPLRKRNAPPLAFLITAIGASIAISEAFGVYTR 137 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + F + V + + + ++ ++ R+ R + + Sbjct: 138 RRPEGAPILVSSEPLFHVAGVPIDAVQLLTIGSALVMMFALDQFINRSRTGRGIRAVAQD 197 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L F G+AG + ++ F + + +LG Sbjct: 198 ANTAALMGVNKDRIILMVFIAGGTMAGVAGLLYDVRIQTLTY-SVGFLLGLKAFTAAVLG 256 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +L +L V G+ + F L ++++ R Sbjct: 257 GIGNLRGALVGGLLLGVVENYAAGLFGSQWKDFAAF-------------AVLVVLLMFRP 303 Query: 337 HSLLRL 342 LL Sbjct: 304 TGLLGE 309 >gi|90420913|ref|ZP_01228818.1| permease component of ABC type branched chain amino acid transPORTER [Aurantimonas manganoxydans SI85-9A1] gi|90334888|gb|EAS48660.1| permease component of ABC type branched chain amino acid transPORTER [Aurantimonas manganoxydans SI85-9A1] Length = 305 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 101/312 (32%), Gaps = 28/312 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--------VILGSRYGL 90 + + IY + A G ++V G +G+++ + IG++ + + L Sbjct: 8 LINGITLGSIYGLIAIGYTMVYGIIGMINFAHGEIFMIGSFVSLTVFLALAALGITFLPL 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ V+ + + G + + + +A LI + L + +T G Sbjct: 68 VLLIMVLVAMLCTSLWGWTVERVAYRPLRGSFRLAPLITAIGMSIFLQNFVQVTQGARVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + ++ T + S V ++ L A L + RT++ Sbjct: 128 PLPPQIQGGITLMDSP------SGIVVQLSYMQMIIIGMTIVLMAGFSLLISRTSLGRQQ 181 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++K L + F + ++ +AG + I F + Sbjct: 182 RACEQDRKMASLLGVNVDRTISLTFVLGASLAAVAGMMYLLYYGVIDFY-IGFIAGVKAF 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL + + G + + F L + Sbjct: 241 TAAVLGGIGSLPGAMLGGLAIGLIETFWSGYFSVEYKDVAAFS-------------ILAI 287 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 288 VLIFMPSGLLGR 299 >gi|37527944|ref|NP_931289.1| branched-chain amino acid transporter permease subunit LivH [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787380|emb|CAE16469.1| High-affinity branched-chain amino acid transport system permease protein LivH [Photorhabdus luminescens subsp. laumondii TTO1] Length = 308 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIP 97 + + Y + A G ++V G +G+++ Y IG+Y ++ + + L Sbjct: 12 MLNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEIYMIGSYVSFMVIAALIMMGIDLGWL 71 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + +I I I + + R Sbjct: 72 LITAAFLTSIVIAAAYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQSSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + +++R + + A R ++ Sbjct: 132 ALPGLITGQWVLGESDGFSASISAMQLTIWIVTFLAMLILTMFIRYSRMGRACRACAEDV 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTNRVISLTFVIGAVMAAIAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + + F L +V+L Sbjct: 251 IGSIPGAMIGGLILGISEALTSAYLSTEYKDAVSF-------------ALLIVVLLFMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|153011714|ref|YP_001372928.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] gi|151563602|gb|ABS17099.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] Length = 333 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 105/307 (34%), Gaps = 3/307 (0%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 +IL + L LF F Q S+ +I+IY + A L++++G G++S Sbjct: 3 YRILFVFLGCVALALFPFGAEALGQTAASSLVARIMIYAIAAASLNLILGYGGMVSFGHA 62 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + IG+Y IL + L + + + + L S Sbjct: 63 AFFGIGSYVVGILYFHHAEETLLFGFIPGSDQFLITVPAAMLVAGLAALVIGALALRTSG 122 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + ++ + G + R + + MYYV+L Sbjct: 123 VQFIMITLAFAQM---LFFLFVSLKTYGGEDGIIVRRANDLFGLSLRDKTTMYYVILVSM 179 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L + + ++ IR +++ ++ KL F ++ G+AGA Sbjct: 180 ILYFGFLWRVVHSSYGAVLSGIRQSERRMTAMGIETYRYKLYGFVLAGMGAGLAGALLTI 239 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 SPD ++++ ++ +VILGG+ + A + + ++ ++ Sbjct: 240 FMRFASPDTLHWTKSGELMVMVILGGVGTFFGPIWGAAAFLILQTYLASWTEHWQLAMGI 299 Query: 312 FDCSFNM 318 + Sbjct: 300 ILLVVVL 306 >gi|157368478|ref|YP_001476467.1| branched-chain amino acid transporter permease subunit LivH [Serratia proteamaculans 568] gi|157320242|gb|ABV39339.1| inner-membrane translocator [Serratia proteamaculans 568] Length = 308 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMVGIDVSWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 +++ + I I + R Sbjct: 72 LIGAGFLVSIVIASAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V + + ++ +++R + + A R ++ Sbjct: 132 ALPSLVTGQWVLGESNGFAATITTMQLIIWVVTFLAMLALTIFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMIGGLVLGVAEALTSAYLSTEYKDVVSF-------------ALLIVVLLIMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|311106316|ref|YP_003979169.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310761005|gb|ADP16454.1| inner-membrane translocator 37 [Achromobacter xylosoxidans A8] Length = 315 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 57/311 (18%), Positives = 111/311 (35%), Gaps = 38/311 (12%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + GI L+ + A G +I+ G G S + Y +G+Y I +++ L Sbjct: 19 VPWYGSDVLVQFGINTLLLAVLAQGWNIIGGYAGYASFGNSVFYGLGSYGVAIAMAQWEL 78 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + A ++ +++G+P L+ RG Y AIATL ++++ I+ Sbjct: 79 PFAAGLALGAALAVVFAVLLGVPVLRLRGHYFAIATLALAQVMTAIVSN----------- 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + + + Y + LG+ L+ + WL R+ Sbjct: 128 ------------IGLAGQNIGLVLQPLNNDPLFYELSLGLLTLATLTVAWLTRSRFGFGL 175 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIV 269 IR+N++ + K+ AFA+S F +AG A + P+ F S N+ + Sbjct: 176 IAIRENEEGAAVMGVNTTLYKVEAFAISGVFSALAGGIHAYWITFLDPESAFDISLNVKM 235 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 I + + GG ++ L + EL + Sbjct: 236 IIMAVFGGAGTVLGPVVGAFSLSAISELLSS--------------EITSVAGLFFGAVIV 281 Query: 330 LVILMRSHSLL 340 +++ L Sbjct: 282 AAVVLMPRGLA 292 >gi|296535184|ref|ZP_06897405.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter [Roseomonas cervicalis ATCC 49957] gi|296264492|gb|EFH10896.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter [Roseomonas cervicalis ATCC 49957] Length = 334 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 107/264 (40%), Gaps = 14/264 (5%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G +GLLS + + +G Y +G + L I Sbjct: 54 FLMKLLCFALFACAFNLLIGYVGLLSFGHAMFFGMGGYISAHAAKVWGFTPELAILAGGA 113 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + A G++ G +++ +G Y A+ TL ++++ ++ T G+ GI R G Sbjct: 114 VGAALGVVAGWIAIRRQGIYFAMITLALAQMVYFFCLQAP-FTGGEDGIQRVPRGALFGI 172 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 S Y+V+ G+ ++ + + IR+N+ Sbjct: 173 IDLSRDMAM-------------YWVVAGVFLAGFLLVNRIIHSPFGQVLTAIRENEPRAI 219 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL KL AF +S+ G+AG + + ++ + V+ + +LGG+ ++ Sbjct: 220 SLGYRSDDYKLMAFTLSATLAGIAGGTKSLVFGIATLTDVYWAMSGEVVLMTLLGGLGTV 279 Query: 282 SKIAKATAILIGVVELCCGMNFYY 305 A+++ + + Sbjct: 280 FGPVMGAAVIVTMQNYLAEFGAWV 303 >gi|237653137|ref|YP_002889451.1| inner-membrane translocator [Thauera sp. MZ1T] gi|237624384|gb|ACR01074.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 310 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 102/305 (33%), Gaps = 7/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G LGL++ +GA + + P+ Sbjct: 8 FINGLVIGSVYALIALGYTMVYGILGLINFAHGDVLMVGALVALQTMLFLMGMAPGMSPL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ L F + LA L + LI ++ + + Sbjct: 68 VMLAIALAVAMVICMLLGFTMERLAYRRLRNAPRLAP-LITAIGVSFLLQTLAMIIWGRN 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + + P V +++ L ++L + RT I A R +N + Sbjct: 127 YHTFPQLISTTPLQPIPGVFVTPVQIAIVVVSALLMVGLLLLVNRTRIGRAMRATAENHR 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + +A +AG FA++ I+ F + + +LGG+ Sbjct: 187 VASLMGVDTNAVIALTFVIGAALAAVAGVMFASNYG-IAHYGMGFMPGLKAFTAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L V G + L F + I L LV++ R Sbjct: 246 GNLGGAMLGGVVLGLVESFGAGYIEH-----LTFGFLNSSYQDIFAFIILGLVLIFRPTG 300 Query: 339 LLRLR 343 LL R Sbjct: 301 LLGER 305 >gi|255281505|ref|ZP_05346060.1| L-arabinose ABC transporter, permease protein AraH [Bryantella formatexigens DSM 14469] gi|255267993|gb|EET61198.1| L-arabinose ABC transporter, permease protein AraH [Bryantella formatexigens DSM 14469] Length = 551 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 29/318 (9%), Positives = 84/318 (26%), Gaps = 9/318 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y I+ + + + + + + ++ Q + A G++ ++ G L+ Sbjct: 228 YIAIVIIFIALCIITPIVKHTPLLTYNNVLNILQQASPRMFLALGVAGLILLAG-TDLSI 286 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G + I+ + + + ++ + L ++ Sbjct: 287 GRMVGMGMTTATIIMHQGVNTG--SVFGHVFDFTGIPVVGRVFLGLLACVVLCTFFTTIA 344 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F I+ + + + + V PS + ++L Sbjct: 345 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIESSIPSMIIPKINGFPTIILWA 404 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + +T + N +A ++ + AF ++ G Sbjct: 405 VAAVIIVWFIWNKTTFGKNLYAVGGNAEAAAVSGISVFKVTVGAFVMAGILYGFGSWLEC 464 Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304 A + + I+ ++ GG+ +S + I + + Sbjct: 465 ARMFGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTYSLTILGID 524 Query: 305 YFNSLLKFDCSFNMRHTT 322 + + T Sbjct: 525 TNLQFVFSGIIILVAVTL 542 >gi|332283386|ref|YP_004415297.1| putative permease component of branched-chain amino acid transport system [Pusillimonas sp. T7-7] gi|330427339|gb|AEC18673.1| putative permease component of branched-chain amino acid transport system [Pusillimonas sp. T7-7] Length = 626 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 64/336 (19%), Positives = 135/336 (40%), Gaps = 34/336 (10%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + L ++ +A + ++ + S Y + +L+ V+FA L ++G G+ Sbjct: 314 MPLRPANQAFKWMAAILLIIFLSLPLLSGSFPYAAVLAQDMLVAVLFAVSLHFMMGLGGM 373 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + + IGAY+ +L GL + + + + +G M+ G ++ G YLA+ Sbjct: 374 PTFGHAAYFGIGAYAAALLFKSLGLGMVASMLAAPLAAGLAAMVFGWFCIRLTGVYLAML 433 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL ++I +I+ +W +T G GI +L YY Sbjct: 434 TLAFAQIVWSIVYQWDDLTGGSNGIVGIWPEAWLSGD-------------------AYYY 474 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +L + L+ ++ + + A R +RD+ + + + +AF V+ G+A Sbjct: 475 FVLAVVVLAVFVVRRMAFSPFGYALRAVRDSALRADASGIHVKGMQWAAFVVAGLLAGLA 534 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA + S+ SP++ +++ + +V+LGG+ +L A + + G+ Y+ Sbjct: 535 GALYVFSKGSTSPEVMTVGKSVDGLVMVLLGGIQTLFGPVAGAAAFTIMQDYFVGITEYW 594 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + L++L+ + Sbjct: 595 RA---------------LFGAVILLIVLVFPQGIAG 615 Score = 60.3 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 103/306 (33%), Gaps = 18/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95 I + + + A GLS++ G +++ Y +G AY+ V L + WL Sbjct: 10 ILNGLAEASSLFLVAVGLSLIFGVSRIVNFAHGSLYMLGLYVAYTVVSLWGHSPVGFWLS 69 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + +A+I G G ++ + L+ + L+ + + G + Sbjct: 70 LICAALIVGVLGALIEIVLLRRIYHAPEMFQLLATFALVLVFNDMALWLWGPDDLLGPLA 129 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 G ++ +++ + ++ L L RT R Sbjct: 130 PGLNG----------SIQIFNRYMPVYDLALIVIGPLILLALWLMLTRTRWGTLIRAATQ 179 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ +L + FA+ + G+ GA + M S +V++ Sbjct: 180 DREMLGALGVNQAWLFTGVFALGAFLAGLGGALQIPRQPA--SLMLDLSVIGDAFVVVVV 237 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S+ A I+ + LC + + +F + I + V++ + Sbjct: 238 GGMGSIPGAYLAALIIAQLKALCITLG---VVDIAGISIAFPKLTLVVEFIFMAFVLVFK 294 Query: 336 SHSLLR 341 LL Sbjct: 295 PWGLLG 300 >gi|222081838|ref|YP_002541203.1| urea or short-chain amide ABC transporter [Agrobacterium radiobacter K84] gi|221726517|gb|ACM29606.1| urea or short-chain amide ABC transporter [Agrobacterium radiobacter K84] Length = 349 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 105/335 (31%), Gaps = 17/335 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + ++ V ++ + + + + + + + L+ + G G+LS Sbjct: 1 MTPRLRLFAQSLAVLVAIIAVAIAPGQLELFTLMQFTLFAAMAVLSLSLAFIWGFGGILS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + +G Y Y I + S I ++ I ++G R + + + Sbjct: 61 FGQTAFFGLGGYVYAISAINFQDST-QGIMLALFIPAVFSALLGYFVFYGRISDVYLGVI 119 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ IL T+G L F S + ++V Sbjct: 120 TLTVTL--ILFNVINSTSGDEYHIGTAMLGGFNGIPAVPTFNMPFDPSTPLSPEQSWWVT 177 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G ++ + + +R+N+ L KL AF + A G+AGA Sbjct: 178 GGALIAVYLLLRLILASPFGRVVVAVRENEVRASLLGYDPRLIKLVAFVIGGAIAGLAGA 237 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + + P +F S + +I + +GG+ +L ++ Sbjct: 238 LYVNWGAFVGPTIFSLSLSAEIIIWITIGGLGTLLGPIIGCILI--------------EY 283 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + ++ L +L+ L+ Sbjct: 284 AVAAIGSQQTLNSNLVLGAVLIFFVLLLPRGLVPT 318 >gi|23500394|ref|NP_699834.1| branched-chain amino acid ABC transporter permease [Brucella suis 1330] gi|256015423|ref|YP_003105432.1| branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|23464014|gb|AAN33839.1| branched-chain amino acid ABC transporter, permease protein [Brucella suis 1330] gi|255998083|gb|ACU49770.1| branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] Length = 328 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 115/327 (35%), Gaps = 27/327 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + ++ + ++ +I+ + L +V G G+ +L + Sbjct: 16 AGLIGIVAIIAASVVGWFLFPDNLALLTRIIAIALLVLSLDLVTGYCGIATLGHAALFGA 75 Query: 77 GAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY I + + L+ + + G++ G L+ G + ++ + +F Sbjct: 76 GAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATGLAQLVLSIAVVHLFHE 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 K T G G+ G F +Y +Y + + +S Sbjct: 136 AANKASGWTGGSDGLSGISPDPIFGI------------FEFDLYGRTVYIYAVILLLISF 183 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + ++ R+ R ++++ ++ ++ A+L + +S A G+ GA A S Sbjct: 184 IFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISGAVAGIGGALNAISTQV 243 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + D F+ + + +++LGG SL T + + ++ N +++ Sbjct: 244 VGLDSLSFTMSAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVSTANPFHW--------- 294 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 T++ L V+L L Sbjct: 295 -----LTMVGALLIAVVLFAPRGLYGT 316 >gi|312197949|ref|YP_004018010.1| inner-membrane translocator [Frankia sp. EuI1c] gi|311229285|gb|ADP82140.1| inner-membrane translocator [Frankia sp. EuI1c] Length = 952 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 119/316 (37%), Gaps = 19/316 (6%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L + + I I + L +V G G +SL + A+S L Sbjct: 333 AVGVLALVGTHGTWRAAVISTFIAAVIGLSLVVVTGYAGQVSLAQLALAGAAAFSLSGLT 392 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + + + ++A+++ G+++GLP+L+ RG L + TL ++ + + + + Sbjct: 393 QSWHVPFPIAPLLAALVATVLGVLVGLPALRLRGLTLGVVTLALAYAIEALWFRNTDFVS 452 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 RL+ L + + F R V + + A + LR + Sbjct: 453 SAGNKVRPPRLFGLDLGIGTGHAFPRIQFGLVCLVVLV---------AVAWGVARLRTSR 503 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + +A +R N+++ + ++ K+ +FA++S G+ G+ A R ++ D F Sbjct: 504 LGSAMLAVRANERSAAGIGINVVRVKVVSFALASFIAGLGGSLLAYRRGVVTYDSFTAIG 563 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + ++S L G+TS+ A + + + + L Sbjct: 564 GLSLLSTAYLAGVTSVFGGVNAGILAGSGIVFVATDRWIHLGDWFP----------VLSG 613 Query: 326 IALFLVILMRSHSLLR 341 +A+ V++ + Sbjct: 614 LAVIAVLIGHPEGVAS 629 Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 70/239 (29%), Gaps = 7/239 (2%) Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G+++ AY+Y L L I P S I G G++ + G L Sbjct: 31 SGVINFATGAVALYVAYAYAFLRQGELLIIIPGPPTSVGIGGDPGLVPAVLIALVFGALL 90 Query: 123 AIATLIMSEIFQNILIKWKPITNG-----KAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + ++ +A RL +V ++ R+ V Sbjct: 91 GVLLYLLVFRPLREAPPLARAVASLGVLVVIQSAMAIRLGTAPVSVDAIFPASRWRLGSV 150 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +Y+ + + L+ ++ R T R ++ + + L + + Sbjct: 151 TLLSDRFYLAVTVVALTLALTAVFRFTRFGLTTRAAAESATGAYVSGASPDRIALLNWMI 210 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 S G AG A + ++ ++GG L A + + Sbjct: 211 SGVVAGAAGILIAPLSPLAPTT--YTLFVVPALAAAVVGGFQHLVPTVGAGLAIGMLQS 267 >gi|254461547|ref|ZP_05074963.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206678136|gb|EDZ42623.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 619 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 120/324 (37%), Gaps = 34/324 (10%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L L L +I + I I+ +FA L ++G GL+S + GA Sbjct: 313 MIVMLGLGLLALLPLVGDSFIQVLITDIAIFCLFAASLHFLLGLGGLVSFGHAAYFGGGA 372 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ +L + G + L + ++ + +G +I G L+ G Y A+ TL +++ +++ Sbjct: 373 YAAALLVTYAGTPMELALILAPLAAGLTAIIFGWVCLRLTGVYFAMLTLAFAQLLWSLVF 432 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +W T G G+ + YY+ L +C I+ Sbjct: 433 QWGDFTGGDDGLVDIWPSEW------------------ASGTTTFYYLALVLCIGGIIIL 474 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + A R RD+ + + + AF + A G+AG F S+ I P Sbjct: 475 RHTAHSPFGYALRGARDSARQAEATGINTKHVQWVAFGFAGAMAGIAGGLFVFSKGSIFP 534 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + + + + +V LGG+ +L+ A L G + Sbjct: 535 NELEIARSFDALIVVFLGGVKTLAGGVVGGAALEGAKDYITRF----------------E 578 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 L+ + + V+++ + Sbjct: 579 YWRLLLGLLIIFVVILAPDGIAGT 602 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 94/308 (30%), Gaps = 28/308 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96 I + M A GLS++ G +++ Y +GAY + W I Sbjct: 8 ILTGLANASALFMVASGLSLIFGVTRIVNFAHGSFYMLGAYVGYSFMQVLPGAWGFWTSI 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ +I G G+++ + L+ + L+ + ++ + G Sbjct: 68 LLAGLIVGLIGIVVEMLVLRPVYKAPELFQLVATFGVILVIQDLTLLVWGADDFLGPRAP 127 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + ++ F++ ++ + +T R + Sbjct: 128 GLKGI----------IRIMGEPIPKYDLALIALTPFVAFALWWLITKTRTGILVRAATQD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + F + A G+ GA + F+ + +V++G Sbjct: 178 REMVGALGVNQAWLFTGVFFLGCALAGLGGAVQLPKGGA--DLLMDFNILSAIFVVVVIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL A ++ + LM + + +V++ R Sbjct: 236 GMGSLPGAYVAAVLISVLNVFGVNY--------------LPQSTLALMFVVMVVVLIFRP 281 Query: 337 HSLLRLRT 344 L Sbjct: 282 FGLFGREE 289 >gi|158425511|ref|YP_001526803.1| inner-membrane translocator [Azorhizobium caulinodans ORS 571] gi|158332400|dbj|BAF89885.1| inner-membrane translocator [Azorhizobium caulinodans ORS 571] Length = 351 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 106/319 (33%), Gaps = 3/319 (0%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 +L + Y + +V A GLS++ G G LS + I Y Sbjct: 25 FLLVLAAACAYPLFADGYTVGNTVYFFTWVFMALGLSVIWGYCGALSFGQTAFFGIAGYG 84 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE-IFQNILIK 139 Y IL +G + + + + L +A L + +L + Sbjct: 85 YGILTINFGSAYGFTLIALVIAVALACLFAALLGYFLFYGRIAGVFLGIVTLSVTLVLER 144 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--IFMYYVLLGMCFLSASI 197 + T G A RL +P V+ + +YYV+LG+ L Sbjct: 145 FMAQTAGPEWRIGAARLNGFNGMSNMPQLTIPWPGGDVVLFPDVELYYVVLGLMVLVYLA 204 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L + N IR+N + L + +L AF + +A G++G + I+ Sbjct: 205 LRILLNSRFGNVIVAIRENPERAEMLGYDVRRYQLVAFVIGAALAGLSGVLYTTWGQYIT 264 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P + + I V +GG + ++ T ++ + Y ++ Sbjct: 265 PSSMGMTAAALPIVWVAVGGRSDITTTLVGTLAVLSGFQTLTIYGSQYALVVMGLLLVVT 324 Query: 318 MRHTTLMVIALFLVILMRS 336 + ++ +L R Sbjct: 325 VLAAPRGLVMALADVLARP 343 >gi|34557812|ref|NP_907627.1| ABC transporter permease [Wolinella succinogenes DSM 1740] gi|34483530|emb|CAE10527.1| ABC TRANSPORT SYSTEM PERMEASE PROTEIN [Wolinella succinogenes] Length = 300 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 93/291 (31%), Gaps = 11/291 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GA+ S + L W + Sbjct: 11 LINGVSLGSMYALIAIGYTMVYGVLRLINFAHADVMMVGAFLVFFGVSSFALPFWAAALL 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + S G+++ + K + I+ LI + L + G +F Sbjct: 71 SILFSALLGVVIDKIAYKPLRNAPRISMLITAIGVSFFLENIFNVFFGSTPKSFEAPAFF 130 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T S ++ V L L ++ L RT A R + + Sbjct: 131 NET----------LSLSHLVLTHIALIVPLVTLLLLGILLYVLYRTKQGMAIRAVAFDVN 180 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + SA + G F+A S I P M + + +LGG+ Sbjct: 181 TVRLMGVDANQIISIVFIMGSALAAVGGIFYAISYPTIDPLM-GVLIGLKAFAAAVLGGI 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 S++ IL + + F F + + + Sbjct: 240 GSVTGAVLGGFILGFTEVVVVALFPELSGYKDAFAFLFLILVLLFRPVGIM 290 >gi|222084830|ref|YP_002543359.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221722278|gb|ACM25434.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 329 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 122/310 (39%), Gaps = 29/310 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +++L + +FA ++++G GLLS + AY +GL L I + Sbjct: 42 FVMKVLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAHAVKEWGLPPELGILIGVG 101 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G+IMG +++ +G Y ++ TL +S +F ++ + Sbjct: 102 GAALLGLIMGFVAIRRQGIYFSMITLALSYMFYFFCLQAEFTKG--------------ED 147 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++S+ R + + MYY +L + +S II + ++IR+N++ Sbjct: 148 GIQSVPRGYLLGILDLNNAFNMYYFVLAVFIISVLIIWRFINSPFGMILKSIRENEQRAI 207 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL ++ KL AF +S+A G+AGA A + + + VI + +LGG+ +L Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKALVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + +F T + I + +L+ ++ Sbjct: 268 IGPLFGAGLVATLENYLATSDFPV---------------TIITGIVFMVCVLLFRRGIIG 312 Query: 342 LRTPSNFLER 351 S + Sbjct: 313 EFYASRLGRK 322 >gi|282857801|ref|ZP_06267009.1| inner-membrane translocator [Pyramidobacter piscolens W5455] gi|282584362|gb|EFB89722.1| inner-membrane translocator [Pyramidobacter piscolens W5455] Length = 293 Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 92/306 (30%), Gaps = 23/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + S IY + A G S+V G +L+ +GAY R+ L + Sbjct: 5 NFFISGISLGSIYAIIALGYSMVYGIAKMLNFAHGDVIMVGAYVCFYAVFRFHLPALAGV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G+++ + K ++A LI + L + + Sbjct: 65 AFAVTVCTLLGIVVEKLAYKPLRQAPSLAVLITAIGVSYFLQNTALLLWTSNPKVFPSVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + ++ + ++ ++ RT + A R ++ Sbjct: 125 GRGAVQLFG---------GQLSISHVTIVTIVSCLVIMTALSWFVGRTRMGKAMRACSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ S +AG ++ + I + + G Sbjct: 176 KGAALLMGINVNATISLTFAIGSGLAAVAGVLLCSAYPTL-MPTTGSLPGIKAFTAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + + ++ L +V+L++ Sbjct: 235 GIGSIPGAFLGGLLLGVIEIFAKAYISTQLSDA-------------VVFAVLIVVLLVKP 281 Query: 337 HSLLRL 342 LL Sbjct: 282 AGLLGR 287 >gi|55377440|ref|YP_135290.1| branched-chain amino acid ABC transporter permease [Haloarcula marismortui ATCC 43049] gi|55230165|gb|AAV45584.1| branched-chain amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 373 Score = 76.4 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 109/342 (31%), Gaps = 42/342 (12%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------RYGLSIWLLI 96 + +L + +FA + G G LS + Y GAY+ +++ + G L + Sbjct: 9 MVGVLYFGLFAISFDFISGYTGYLSFGHAVFYGTGAYTVILIANGKLPLLGPGTPFMLSL 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V +I+ M++GL S + G Y A+ TL +++F + W + Sbjct: 69 LVGGLIAVVLAMLVGLVSFRLSGVYFAMITLGFAQVFYVFVRGWDYVATNPRDGPAVGPS 128 Query: 157 YFLGTTVRSLIRFF-------------RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 + G + S + YY++ + + + Sbjct: 129 HAEGFQIGVPGIDQLSLSIGVLTGDEVALLGSTLSGTEVSYYMIGLVVLACYFAMQRIIH 188 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFK 262 + IR+N++ ++ KL AFA+S F +AG FA + SP+ F Sbjct: 189 SPFGRVMLAIRENEERAVAIGYNTYLYKLGAFAISGFFAAVAGGLFAGFKRSASPENSFY 248 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAI----------------------LIGVVELCCG 300 F + I+GG +L+ + E Sbjct: 249 FLVTGDALLASIIGGFGTLAGSLYGHLFDETVREFLSKAGQGGGLLPYLRALLGQETLDA 308 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 D N + + I L +L LL Sbjct: 309 TLVGETTIGGLIDLLLNGHASLYVGIVFVLFVLYVPDGLLGT 350 >gi|222086824|ref|YP_002545358.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221724272|gb|ACM27428.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 300 Score = 76.4 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 90/304 (29%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +G ++ +I L Sbjct: 8 LLNGLTLGSIYGLIAIGYTMVYGIVGMINFAHGDVFMLGGFAALITYLVLVSFFAGLPVA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ ++ + + +A L S ++ I VA Sbjct: 68 VLLLVMLIVAMLMTSLWNWVIERIAYRPLRGSFRLAPLITAIGMSIVLSNFIQVAQGPRN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + V + + + L A+ + +TA+ A R ++K Sbjct: 128 KPI---PTLVGDVYNFDGVSLSLKQIIIFVITVVLLAAFWYLVNKTALGRAQRATEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + + F+ + + +LGG+ Sbjct: 185 MAALLGINVDRTISVTFIMGAALAAVAGTMYLMYYGVANFTD-GFTPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L V++ + Sbjct: 244 GSLPGAVLGGLMIGFIES-------------FWSGNFAIAYKDVATYAILAYVLIFKPTG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|317403038|gb|EFV83575.1| hypothetical protein HMPREF0005_02993 [Achromobacter xylosoxidans C54] Length = 329 Score = 76.4 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 66/327 (20%), Positives = 131/327 (40%), Gaps = 26/327 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + L + + + + + +++ ++V G LG +S + Sbjct: 17 WPVAVALAAAALLALVPLVVTDSFTLQVLLLAIMFGALGACWNLVGGFLGRISFGHAVFV 76 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +G Y+ ++L L+ L IP+ +IS A ++G P+L+ G Y A+AT+ + +I Sbjct: 77 GVGGYTTLLLLHHLKLTPLLGIPLGGLISAALAWLVGGPTLRLSGHYFAMATIALLQIGL 136 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++I W ++ ++ Y++ +G+ FL+ Sbjct: 137 LLMINWDWAGGAVGLEAPIGDAAWMLLFRS---------------KVPYYWIAVGLAFLT 181 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +L + WR I ++ A SL K+ AF +S+ G+ G FFA Sbjct: 182 FCATYFLVHSKTGFYWRAINGDEAASRSLGVPADRYKMLAFVLSAGMTGVWGGFFAMYVG 241 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I P+ MF + ++ V+ + ILGG+ +L A+L+ + E + + Sbjct: 242 FIDPESMFSLTMSVQVVLVAILGGVGTLVGPWLGAAVLLPLSEGTRVL----------WG 291 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340 S + +A+ LV L L+ Sbjct: 292 SSGLGLDLLIFGLAILLVTLFLPGGLV 318 >gi|311103675|ref|YP_003976528.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310758364|gb|ADP13813.1| inner-membrane translocator 4 [Achromobacter xylosoxidans A8] Length = 304 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 99/308 (32%), Gaps = 15/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + M A GL+++ G +G+++L Y +GAY Sbjct: 8 LLNGLQFGAMLFMLAAGLTLIFGIMGVVNLTHGSFYMVGAYCAAYAIG----------TT 57 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++G ++G + L I L + +L + + + + Sbjct: 58 GSFLAGVLAALLGAGLYGISVEVLVIRKLYKRDHLYQVLATFGLLLFSNEAVSLIFGRRP 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + S + + Y + + ++ + + RT I R D+++ Sbjct: 118 PLVGIPSFLEGAVTLAPGFQYPLIRLSFIAIGALVAVGLWWLVNRTRIGMLIRAGADDRE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L I F + + G+AG A I ++++GG+ Sbjct: 178 MVDALGIDIRKLYTLVFGLGALLCGLAGVMAAPLLAV--EIGMGERILITTFVVIVIGGV 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMR 335 S+ ++ V L +++ + + + + + +V++ + Sbjct: 236 GSVRGALAGALLVGMVDSLGRAFLPQLLSTMFSPATADPLAAGMASASIYVLMAIVLIAK 295 Query: 336 SHSLLRLR 343 L R Sbjct: 296 PGGLFPAR 303 >gi|300696580|ref|YP_003747241.1| high-affinity branched-chain leucine/isoleucine/valine transporter subunit protein (ABC superfamily, membrane) [Ralstonia solanacearum CFBP2957] gi|299073304|emb|CBJ52813.1| high-affinity branched-chain leucine/isoleucine/valine transporter subunit protein (ABC superfamily, membrane) [Ralstonia solanacearum CFBP2957] Length = 293 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 111/303 (36%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y +FA G ++V G LG+++L+ + +GAY+ + + +++ L +W + V Sbjct: 6 LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQIVTQFELPLWAALAV 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++SG G+I+ + L + +I Sbjct: 66 GFVVSGVAGLIIDVL--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L+ V +++ L A+++L L+RT + A R I ++ K Sbjct: 118 NLRFPAGLVSDASLDLGGVHLTPLELGIIVLSFVLMAALMLLLKRTQLGRALRAIAESPK 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L + L ++A G++G + + P M + + + +++ILGG+ Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLSGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L L + F LFL++L+R Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|218674287|ref|ZP_03523956.1| putative branched-chain amino acid ABC transporter, permease protein [Rhizobium etli GR56] Length = 397 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 109/329 (33%), Gaps = 34/329 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL + + L Y S I +V+ A I+ G G S + I Sbjct: 6 LLITAPVVAILASLPYLGMADYYLSYLYIIFFWVVLATSWGILSGYTGYWSFGHAAFFGI 65 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK---FRGDYLAIATLIMSEIF 133 G Y+ L ++ IP +A+++ +++GL + RG++ A+ TL ++ + Sbjct: 66 GVYTTATLTTQLSWPFVATIPAAALLAAVVAVLIGLVVFRSGALRGEFFALLTLSVTFVV 125 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 I+ + + P +Y + Sbjct: 126 AAIVSNTALDSG-----------------TGVFLSGIEIPMIGATASGSLYMFGFIAALV 168 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + ++ + I D++ KL +FAVSSA G GA A Sbjct: 169 ALATSYFIFHSKFGQGLLAIHDDEDVAEVKGVPTFRYKLISFAVSSALAGAMGAIHAVYV 228 Query: 254 DRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 ++ + F + + V+ + ILGG + A I+ + F Sbjct: 229 GYVTVGETFAVTVPLYVVLMSILGGARHWAGPAIGAVIITVMQSAIVSGAHAEFGRAG-- 286 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +AL +VIL+ ++ Sbjct: 287 -----------VALALIVVILVLPSGIVP 304 >gi|39937461|ref|NP_949737.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] gi|39651320|emb|CAE29842.1| possible branched-chain amino acid ABC transporter, permease protein [Rhodopseudomonas palustris CGA009] Length = 355 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 112/338 (33%), Gaps = 14/338 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L ++ +++ ++ +I I+ +++G G +S + Y Sbjct: 13 VLSLLLITIVVVLAITPFVFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFY 72 Query: 75 AIGAYSYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 IG+Y+ I G S + + ++ +++GL SL+ + A+ TL ++ Sbjct: 73 GIGSYAVAIALYGMGPSWAAVGAGVLIGLPLAALLALVIGLFSLRVEAIFFAMITLAVAS 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F + + +T G+ G + + F + I YY++L C Sbjct: 133 AFLVLASQLSWLTGGEDGRSFSLP----ELLRPGTVFVKDFFGVRINGRILTYYIILVGC 188 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 +L + + + +R+N+ +L +F A +++ AG A Sbjct: 189 AGMILALLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVLAALVAAAAGVLNAM 248 Query: 252 SRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 FS + ++ +V++GGM ++ I I + + Sbjct: 249 WLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASGAAA 308 Query: 311 KFDCSFNMR------HTTLMVIALFLVILMRSHSLLRL 342 + + + ++ Sbjct: 309 DAGLPLLPNLLHPDRWLLWLGLLFVASVYFFPTGIVGR 346 >gi|120403579|ref|YP_953408.1| inner-membrane translocator [Mycobacterium vanbaalenii PYR-1] gi|119956397|gb|ABM13402.1| urea ABC transporter membrane protein [Mycobacterium vanbaalenii PYR-1] Length = 370 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 100/336 (29%), Gaps = 29/336 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L+ + + S+ + L + + A G+ + G G+L L + + +G Y Sbjct: 16 AAALVLFVVAPAVLSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLGGYMM 75 Query: 82 VILGSRYGLSI---------------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + + L + S +I + L + Sbjct: 76 AMHLKIADAQLRGDEVPDFMQIQGIRELPGYWAPFASPLVTLIAIVVVPTGIAAALGLGV 135 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 I + + A + V + FF F + + +Y++ Sbjct: 136 FKRKVKGAYFAILSQALAAALAILLVGQTSLGGSNGLNRFRTFFGFALNDPVNRRMLYFI 195 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + +++ L ++ +RD ++ L K+ A+A ++ F +AG Sbjct: 196 AAAVLLVVVAVVRQLMQSRYGELLVAVRDGEERVRFLGYDPANIKVVAYAAAALFASIAG 255 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A FA I+P +I + V +GG T+L + L + Sbjct: 256 ALFAPIVGFIAPSQVGILPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTLFSERFPSEW 315 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + +V+ L L Sbjct: 316 TYAQ--------------GLLFIVVVGFFPAGLAGL 337 >gi|330949946|gb|EGH50206.1| inner-membrane translocator [Pseudomonas syringae Cit 7] Length = 307 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 95/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + Y + A G ++V G +G+++ Y IG+Y + + + Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +++ A G + + + + + LI + L ++ G Sbjct: 71 LMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + L + F + V+ V L + L++ R+ + A Sbjct: 131 AIPNLL-------PGSLSFGPGGAEEVLISYMQIVVFLVTLVAMTGLTLFISRSRMGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F V +A +A + I+P+ F + Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L + + ++ F + I Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|328880632|emb|CCA53871.1| branched amino acid transport system ATP-binding protein [Streptomyces venezuelae ATCC 10712] Length = 912 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 99/283 (34%), Gaps = 16/283 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A + LL T + + + Q L + ++V G ++SL A Sbjct: 330 AWIVAALLLGTAFYTVTTPFWSGILAQGLAIGLVFMSFTVVTGLGAMVSLAQATFVTGAA 389 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 +L S + G ++ LP+L+ G LA+ATL ++ + +L Sbjct: 390 LVAGLLMSHGWP-FVAAAAAGTAAAALLGAVVALPALRLGGRSLALATLALAFLADQVLF 448 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + P+ NG G + + L+ + + +++ Sbjct: 449 QLGPLRNGDTGWEIPRPVAGPVDLSDDRAMG---------------LALVLLSCVLVALL 493 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 LR + A +R +A + +++ KL F VS+ G G +A+ RI+ Sbjct: 494 TRLRGSRWGRAMLAVRSAPEAAAASGVSVVRTKLLLFTVSAGLAGFGGVLYASYNTRITA 553 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 F ++ +++V+ G+ A + V L Sbjct: 554 TDFTAMTGLVWLAVVVAAGVRRPQFAVVAGLVFAVVPHLMATY 596 Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 85/303 (28%), Gaps = 11/303 (3%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLI 96 ++ S + +Y + A GL + + GL + + A ++ + ++ + Sbjct: 7 FVLSGLVSGALYALLATGLVLSYSASGLFNFAHGATAYLCALAFYELHSGFGWPAVPTAL 66 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL----IKWKPITNGKAGIYV 152 + +++ G + + A ++ + L + + + Sbjct: 67 LLVTVVAPGLGWGLDRLMFRKLAKAGETAQIVATIGLLVALPAAGLWVVELLERAGAPVL 126 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 F V P V + + +A + + +R T + R Sbjct: 127 PAENQFGLPGVGPSPAVSWQPLDGVGIDSDQLITWIVTALTAAGLWILMRHTRLGLRLRA 186 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 DN+ A+ +SS G+AG + D + + Sbjct: 187 AVDNRALTELRGIGADRLSSIAWMLSSGLAGLAGVLATPLLGLSAHD--YTLFLFVSATA 244 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 +LG S+ L + L G + ++ L ++ Sbjct: 245 AVLGRFASVPLAFAGGLGLGVLQNLVAGYASF----AEGVTGFRTAVPFLILFAGLVVLA 300 Query: 333 LMR 335 R Sbjct: 301 RRR 303 >gi|312141165|ref|YP_004008501.1| branched-chain amino acid ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311890504|emb|CBH49822.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 363 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 104/351 (29%), Gaps = 29/351 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + ++ + + ++ + L + + A G+ + G G+L+L + + Sbjct: 9 VWVGFAVAAVVLFGVAPAMLSDFRLNLLAKFLCFAIVAVGIGLAWGRGGMLTLGQGVFFG 68 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY + + M + + A L++ Sbjct: 69 LGAYIMAMHLKIADAELRGDSVPDFMQIAGIRELPSYWTPFTDPFTTIAAILLVPAFVAF 128 Query: 136 IL---------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 +L I + + A + + + + FF F S + Sbjct: 129 LLGLGVFKRRVKGAYFAILSQALAAAFAILLIGQQSIGGSNGLNRFRTFFGFNLSDPANK 188 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 ++++ + L + L + +RD ++ L K+ A+ V++ Sbjct: 189 RMLFFIAAAVLLLVVAATRQLMNSRYGELLVAVRDQEERVRFLGYDPANIKVVAYTVAAF 248 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G+AGA F ISP +I + V +GG T+L + Sbjct: 249 FAGIAGALFVPIVGIISPADVGIVPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTTLSE 308 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +F T + +VI + L R Sbjct: 309 --------------NFPSAWTYAQGLLFIVVIGFFPAGIAGLAKLFGRRRR 345 >gi|284164602|ref|YP_003402881.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] gi|284014257|gb|ADB60208.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] Length = 372 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 112/280 (40%), Gaps = 23/280 (8%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + + A I+ +FA G I G G +S A Y+ +L Sbjct: 74 VPMWAPLFVGNYMRTLAVACIWSIFAMGWDIQSGYTGYISFGHSALSAAAGYTTALLAVN 133 Query: 88 --YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 S W+ IPVS + + G+++GLPSL+ G Y ++ T + +F + I + Sbjct: 134 LSPVPSFWVTIPVSILAALVLGLLIGLPSLRLSGPYFSLVTFVAVLLFYRLTIGFSETLG 193 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G+ G + + T YY++L L A+ + + R+ Sbjct: 194 GENGFQAVEVFTWDFTE--------------------RYYLMLVPMLLVAAALTVVARSN 233 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + IR+N++A + KL +FA+SS +G+ G A + P F + Sbjct: 234 VGTVLVAIRENERAVSAAGLDPTKFKLWSFALSSITMGIGGVLLAHFGGNVDPTTFVVVD 293 Query: 266 N-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 I +I++ ++GGM+S+ + + + + + F Sbjct: 294 RSIEMIAMAVIGGMSSVLGPIGGAFLFVLLRDEILRLWFG 333 >gi|289577847|ref|YP_003476474.1| inner-membrane translocator [Thermoanaerobacter italicus Ab9] gi|289527560|gb|ADD01912.1| inner-membrane translocator [Thermoanaerobacter italicus Ab9] Length = 294 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GA++ + +S + Sbjct: 8 LINGISVGSIYALIALGYTMVYGIIKLINFAHGDVYMLGAFAGLYATLVLKMSFVPALIF 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G+I+ + + + I LI + L G + Sbjct: 68 SMIVCAILGIIIERLAYRPLRNSPKIVILITAIGVSLFLEYTTMFFLGPQPRAFPEIFKH 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V +++ L + + T I A R + + + Sbjct: 128 AS---------YTLLGGKVTISNQEILIIVVTIILMILLQYIVHNTKIGKAMRAVSYDMQ 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG +++ P M + +LGG+ Sbjct: 179 AARLMGINVDTTISITFALGSALAAAAGVLVGIYYNKVFPLM-GIMFGLKAFVSAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + IL L G + + F + L +++L++ Sbjct: 238 GIIPGAMAGGFILGITESLVSGYGSSLYRDPVAF-------------VILIIILLVKPSG 284 Query: 339 LLR 341 L Sbjct: 285 LFG 287 >gi|160895670|ref|YP_001561252.1| urea ABC transporter permease UrtB [Delftia acidovorans SPH-1] gi|160361254|gb|ABX32867.1| urea ABC transporter, permease protein UrtB [Delftia acidovorans SPH-1] Length = 304 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 91/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+I+ G +G++++ IGAY+ + + L+P + Sbjct: 18 LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLGSTLTAQHAPELMPYYFPL 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + L + +L W + + T Sbjct: 78 AIVAAFLFAFAAGWLVEWGL--IRHLYKRPLDTLLATWGVSLALQQCFRTFIGPKEVSPT 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + I +VL ++A +++ L ++ R N+ + Sbjct: 136 LPDWLMGSWAPAEGLDIPINGLFVLALTAVVTAGVLIALHKSRWGLRVRATVSNRVMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + FA+ G+AGA A + + + +V GG SL Sbjct: 196 IGIDTKKTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + ++ + ++++R L Sbjct: 254 GTVVSAFGIAQTQSITEFFLAGSMAKVITLS-------------LIVFILMLRPQGLFAS 300 Query: 343 R 343 + Sbjct: 301 K 301 >gi|121607849|ref|YP_995656.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121552489|gb|ABM56638.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 629 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 119/312 (38%), Gaps = 34/312 (10%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 Y+ + I +LI +FA L ++G G+ S + + L R G Sbjct: 337 PLFAAGSPYLTVLMIDLLIAALFAASLHFIMGPAGMHSFGHAAYFGL-GAYAAALLLRAG 395 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L++ + ++ + + A ++ G ++ G YLA+ TL ++I I +W +T G G Sbjct: 396 LAMEAALALAPVAAAAGALLYGWFCVRLSGVYLAMLTLAFAQITWAICYQWDGVTGGSNG 455 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + + + YY+ L + ++ + A Sbjct: 456 LTGVWPAPW------------------LAGQRSYYYLTLALVVAGLLLLRRMLFAPFGYA 497 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R RD+ ++ + + +AF ++ + G++GA FA S+ ISP+ ++ Sbjct: 498 LRAGRDSALRAEAIGIDVRRLQWTAFVIAGLWAGLSGALFAFSKGSISPETLHVVRSVDG 557 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +V+LGG+ +L+ + + Y+ L+ + Sbjct: 558 LVMVLLGGLQTLAGPVVGAVTFTWLHDTVARNTDYWRA---------------LLGAIML 602 Query: 330 LVILMRSHSLLR 341 ++L+ ++ Sbjct: 603 ALVLLFPQGIVG 614 Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 97/304 (31%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + + GLS++ G +++ + +G + L + G + + Sbjct: 10 LLNGLAGASSLFLVSAGLSLIFGVTRIVNFAHGSFFMLGIFMAYSLAALLGQRLGFWPAL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + L R Y A + F +LI + + Sbjct: 70 LLAALATGALGALVEVLLLRRIYRAPELFQLLATFALVLIIKDAV--------LWFWGPE 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R+ + + ++++ + + L L RT R +++ Sbjct: 122 ELLGPRAPGLSGAVDILGRQFPSYDLFLIVVGPVVLGLLWLLLERTRWGTLVRAATHDRE 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L + FA+ + G+ GA + +V++GGM Sbjct: 182 MLGALGVRQARLFTAVFALGALLAGLGGALQLPREPA--TLDLDLNTIGAAFVVVVVGGM 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A ++ + LC + L + SF+ + + + +V+++R Sbjct: 240 GSIPGAYLAALLIAELKALCIWLG---VVELWGYSVSFSRLTLVVEFLVMAVVLVLRPWG 296 Query: 339 LLRL 342 L+ Sbjct: 297 LMGR 300 >gi|320325674|gb|EFW81736.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] Length = 307 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 94/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + Y + A G ++V G +G+++ Y IG+Y + + + Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +++ A G + + + + + LI + L ++ G Sbjct: 71 LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + L + F + V+ V + + L++ R+ + A Sbjct: 131 AIPNLL-------PGSLSFGPGGAQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F V +A +A + I+ F + Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + V+LGG+ S+ +L + + ++ F + I Sbjct: 243 TAVVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|307150570|ref|YP_003885954.1| inner-membrane translocator [Cyanothece sp. PCC 7822] gi|306980798|gb|ADN12679.1| inner-membrane translocator [Cyanothece sp. PCC 7822] Length = 316 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 99/320 (30%), Gaps = 31/320 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------------L 84 + +Y +FA G ++V LG+++ + +GAY Sbjct: 10 FLNGLSVGSVYAIFALGYTLVFSILGIINFAHGAIFTLGAYFVYFLIGGASGFNGWLSNA 69 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + + + + ++++G +I+ + K + A + L + + I Sbjct: 70 QLPFSFPFAIALLLGSVLAGLVAIIVERLAFKPLRERGADSLLTLVSSLGAAVFIVNLIQ 129 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G + V+ + L A + + T Sbjct: 130 LLVGAEIYTFPDNIYGN--LPVAINLGTVEKPVMVRTVQIIIFLVSALTLAVLTYLINST 187 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 I A + + ++ L + F +S GMAG +S I+ F + Sbjct: 188 KIGKALQAVAEDTTTASLLGINPEKYIVFTFFLSGFLGGMAGTLVGSSV-SIAGPYFGIT 246 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + + +++LGG+ ++ I+ ++ + Sbjct: 247 FGLKGLGVIVLGGLGNIPGAVIGGLIIGLAESFV--------------PTDYSGYREAIS 292 Query: 325 VIALFLVILMRSHSLLRLRT 344 LF+++L+R LL + Sbjct: 293 FALLFIMLLVRPQGLLGRKR 312 >gi|91786472|ref|YP_547424.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91695697|gb|ABE42526.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 411 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 99/334 (29%), Gaps = 36/334 (10%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + ++ + L Y A GL ++ G G+LSL + + +G Y + Sbjct: 26 IFPLSLDLFRLNLVGKYLSYSFVALGLVMLWGYGGVLSLGQGVFFGLGGYGMAMFLKLEA 85 Query: 90 LSIWLLIPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 S + FR L + +++ F +I + Sbjct: 86 SDPVTTKIQSTPGIPDFMDWNQITALPLWWEPFRSFPLTLLLILVVPTFLAFIIGYAMFK 145 Query: 145 NGKAGIYVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 G+Y A + L + + + +Y+V Sbjct: 146 RRVGGVYFAIITQAVALILTVLIIGQQGYTGGVNGMTDLKTILGWDTRTDSAKYILYFVT 205 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G+ + + W++++ + +RD + + ++ AF ++ + GA Sbjct: 206 AGLLLGAIVLCTWIQKSKLGTLLLAMRDKEDRVRFSGYDVAMFRVFAFCFAAMLSAVGGA 265 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F +SP + +I ++ +GG SL ++ Sbjct: 266 MFTLQVGFMSPSLVGIVPSIEMVIFAAVGGRMSLVGAVYGALLVNFGKTY---------- 315 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F SF LM V+L L Sbjct: 316 ----FSESFPDLWLFLMAAMFLGVVLAFPDGLAG 345 >gi|33595299|ref|NP_882942.1| putative branched-chain amino acid transport system permease protein [Bordetella parapertussis 12822] gi|33565376|emb|CAE36179.1| putative branched-chain amino acid transport system permease protein [Bordetella parapertussis] Length = 298 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 62/325 (19%), Positives = 126/325 (38%), Gaps = 37/325 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + + L YI ++ + + + + A L V+ +G L+ + IG Sbjct: 7 LVFILFIAAVLVGCIALGSGYIGNLVVWMSVAAVMATSLRFVL-LIGELNFATAAFFGIG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY + + L +L++ +SA+++ A ++ G +LK +G Y + +E + + Sbjct: 66 AYCTGYIANYLDLPFFLILALSALLALAVSVVFGCITLKVKGPYFLLIGFAFTEALRILY 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + G +G+ +L +Y +CF Sbjct: 126 TR-TDVLGGNSGLVGIFPPIWLEAH--------------------YHYFATVLCFALIVA 164 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L++ R+ + + IRDN+ SL + K+ FAV+SA G+AG+ A + + IS Sbjct: 165 LLFVERSNLGKVFVAIRDNENVVRSLGIPVFMTKVLCFAVASAVAGLAGSVHAYASNVIS 224 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 F F + ++ + +GG S +L+G+ + Sbjct: 225 SLDFGFMLSTFALAYLKVGGEDSPLGPIIGAVLLVGIASYAQTLGG-------------- 270 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 L +A+ + +L L+ L Sbjct: 271 -NEHILYGLAIIVSVLFMPKGLMGL 294 >gi|296269449|ref|YP_003652081.1| inner-membrane translocator [Thermobispora bispora DSM 43833] gi|296092236|gb|ADG88188.1| inner-membrane translocator [Thermobispora bispora DSM 43833] Length = 322 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 97/313 (30%), Gaps = 27/313 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL------- 95 IY + A G ++V G L L++ + IGA++ + + G++ L Sbjct: 17 LASGAIYALIALGYTMVYGVLRLINFAHSEIFMIGAFAGLFAIIQLGITAPLGGLALIGT 76 Query: 96 ------IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 ++A A + R +A LI + L + + Sbjct: 77 LLVLFLAAMAASGGAAILLERVAYRPLRRRGAGRLAALISAIGASIFLQELFALVIIPEV 136 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + R L R F + +++ + + +++ RT I Sbjct: 137 FDRPSQGRIQVPVPRLLERETVFSIGNMDVRNDHLIIIVAAVIMMVLLDVFVNRTRIGRG 196 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + + + I + F V A G+A +A + + F I Sbjct: 197 IRATAQDPETATLMGVDIDKIIRTTFFVGGAMAGVAAVLYAMEFENL-RYNVGFLLGIKA 255 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ ++ +L + + ++ F L Sbjct: 256 FTAAVLGGIGNIRGALLGGILLGLIENWGSIFYGSEWKDVIAFT-------------VLV 302 Query: 330 LVILMRSHSLLRL 342 LV+L R +L Sbjct: 303 LVLLFRPTGILGE 315 >gi|293602111|ref|ZP_06684564.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292819513|gb|EFF78541.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 422 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 120/329 (36%), Gaps = 34/329 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 ++ + L +Q+LI +FA +++ G G+LS + +G Sbjct: 10 ALLLIVCVAALCALPWLLPPGQLVAAVQMLIAALFACAFNLLAGQGGMLSFGHAAYFGVG 69 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGA----CGMIMGLPSLKFRGDYLAIATLIMSEIF 133 ++ + + G + L P+ ++ G G++ G + G Y ++ TL ++E+ Sbjct: 70 TFATIHAMNALGGAGLLPTPLMPLVGGVAGLLFGLVAGWFATMRSGVYFSMITLALAELL 129 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + K + G+AG+ + T I +Y+++L + Sbjct: 130 HALAPHLKSVFGGEAGVSAMRMPAWGFTFGSD---------------IEVYFLVLAWVLI 174 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 S + + L RT + +R+N L K FA+S+ F G+AG A + Sbjct: 175 SLAALYGLTRTPLGRLTLGLRENANRLRYLGYRPHALKTMVFALSAMFAGIAGGLQALNI 234 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + + +F+ + + +GG+ + AIL + + + + Sbjct: 235 EAGNYVLFEVKLSTDAVLFAYIGGVNAFLGPVLGAAILTFLSQTLADITRSW-------- 286 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + LV+L L+ L Sbjct: 287 -------LLYQGVLFVLVMLFVPDGLVGL 308 >gi|293607568|ref|ZP_06689902.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292814001|gb|EFF73148.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 333 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 121/314 (38%), Gaps = 30/314 (9%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + + ++ ++ ++L+Y + A L++++G G++S + +GAYS ++ Sbjct: 28 PVYAHWQGEPFLLALFGRVLVYAVAALALNLLLGFGGMVSFGHALYLGLGAYSVGVMSHY 87 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 S WL + + G++ G ++ G + TL +++F + Sbjct: 88 GIESGWLHLAGALGACAVVGLVSGYVVMRTSGIAFIMITLAFAQMFYFLAT--------- 138 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 F G SL F + + + +YY G+ +++ L Sbjct: 139 ------GLDGFGGDDGMSLFAGSDFGAFRLDTPLALYYAAFGVLVAVLALMHRLIHAPFG 192 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 R + N++ +L + +L+A+ +S+ G+AG A +SP ++ + Sbjct: 193 MVLRGCQANERRMRALGFPTLRYRLAAYVISAMICGVAGVLLANLTMYVSPSYLAWTTSG 252 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 +I +V+LGG+ +L + + E + ++ +M + Sbjct: 253 ELIVMVVLGGIGTLFGPVVGALAFLLLEEGLKLLTGHW---------------MLIMGLL 297 Query: 328 LFLVILMRSHSLLR 341 + V+L+ + Sbjct: 298 IVGVVLVSRRGVYG 311 >gi|15889697|ref|NP_355378.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15157605|gb|AAK88163.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 300 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 92/304 (30%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +G ++ +I+ + Sbjct: 8 LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLIATSFFAGIPVA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ ++ + + +A L S ++ I V Sbjct: 68 LLLLLMMIVAMLMTGLWNWVIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQVTQGPRN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +++ L + + +T + A R ++K Sbjct: 128 KPI---PSMVTESYHFGAITVSLKQLIIMVVTSVLLFAFWYIVNKTPLGRAQRATEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + S F + + +LGG+ Sbjct: 185 MAALLGVDVDKTISITFIMGAALAAVAGTMYLMYYGVASF-SDGFVPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L V++ + Sbjct: 244 GSLPGAVLGGLLIGLIESLWSAYFSIAYKDVAAFG-------------ILAFVLIFKPTG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|241765733|ref|ZP_04763679.1| urea ABC transporter, permease protein UrtB [Acidovorax delafieldii 2AN] gi|241364393|gb|EER59516.1| urea ABC transporter, permease protein UrtB [Acidovorax delafieldii 2AN] Length = 304 Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 89/301 (29%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+I+ G +G++++ IGAY+ + + +P + Sbjct: 18 LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLGSTLTAQHAPAFMPYYFPL 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + L + +L W + + T Sbjct: 78 AIVAAFGFAFAAGWLVEWGL--IRHLYKRPLDTLLATWGVSLALQQSFRTFIGPKEVSPT 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + I +VL ++ ++L L ++ R N+ + Sbjct: 136 LPDWLLGSWAPAEGLDIPINGLFVLGLTALVTGGVLLALHKSRWGLRVRATVSNRVMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + FA+ G+AGA A + + + +V GG SL Sbjct: 196 IGIDTKKTDRLTFAIGCGIAGIAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + ++ + L++++R L Sbjct: 254 GTVVSAFGIAQTQSITEFFLAGSMAKVITLS-------------LIVLILMVRPQGLFAS 300 Query: 343 R 343 + Sbjct: 301 K 301 >gi|288960412|ref|YP_003450752.1| ABC transporter permease protein [Azospirillum sp. B510] gi|288912720|dbj|BAI74208.1| ABC transporter permease protein [Azospirillum sp. B510] Length = 325 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 118/312 (37%), Gaps = 29/312 (9%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + + +I M A LS++VG GL+SL IGAY+ V + Sbjct: 22 PFLGFGDGFALGLLARAMILGMAAVSLSLLVGGAGLVSLGHAATMGIGAYAVVAFDAAGI 81 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 ++ P + + A ++ G SL+ G + + TL ++ + + G G Sbjct: 82 SEGLIVFPAAIAAAAAYALVTGAVSLRTSGVHFIMITLAFGQMAFFTTSSFSSL-GGDDG 140 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + R +LG + + +++ LG+ L L + Sbjct: 141 YTLYARTEWLGMRILDNR-------------LAFHFLCLGLLALVWIGGTLLLGSRFGRV 187 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R R+N + ++ +L+A+ ++ A G+AGA A + + +SP + ++ + + Sbjct: 188 LRAARENPQRALAVGFQPYPYRLTAYGMAGAVGGLAGALLANATEFVSPALLSWTRSGEL 247 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +VILGG+ L ++ + E + Y+ + L Sbjct: 248 LFMVILGGVGQLGGAILGALAMVLLEETLSHLLVYW---------------RLVFGPLLV 292 Query: 330 LVILMRSHSLLR 341 L +L L+ Sbjct: 293 LAVLFLPDGLVG 304 >gi|229490169|ref|ZP_04384016.1| putative high-affinity branched-chain amino acid transport protein [Rhodococcus erythropolis SK121] gi|229322917|gb|EEN88691.1| putative high-affinity branched-chain amino acid transport protein [Rhodococcus erythropolis SK121] Length = 319 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 119/323 (36%), Gaps = 30/323 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ +++ L Y + Y + A G+ + G LS+ AIGA Sbjct: 8 ALITVVVVAAVLLWMGPSLYRQDLVFLAATYSLIALGMYVPFVLAGSLSMAYSAYAAIGA 67 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ ++ R GLS+W + A+ + A +++ L + K G YLA TL+ F++ LI Sbjct: 68 YAVALISVRTGLSMWWGWILGALAAAAVAVLLSLATQKLSGFYLAAVTLLFGIAFEHWLI 127 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 T G AGI + + + + + L A + Sbjct: 128 DGPSFTGGSAGISGVETVTMF---------------GWEPPRYALVVFAILFVCLIAVAV 172 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 LR++ + RDN+ S + A A+ +A G+ F S ++P Sbjct: 173 DRLRKSVWGLMLQAARDNRNVARSSGVNPAHLTVVALAIGAAIASTGGSLFTVSVQAVTP 232 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + F S + I + I+GG S I++ V G Sbjct: 233 ETFTLSIVFLAIFMPIIGGRGSAWGAPLGALIVVIVTLNMPGYQGSGE------------ 280 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 L+ A+ +++++ ++ Sbjct: 281 ---LLLAGAVLVILIVAPGGVIG 300 >gi|56751927|ref|YP_172628.1| neutral amino acids ABC transporter permease NatD [Synechococcus elongatus PCC 6301] gi|56686886|dbj|BAD80108.1| integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD [Synechococcus elongatus PCC 6301] Length = 317 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 92/303 (30%), Gaps = 26/303 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + + + A GL+++ G L L + +GAY ++ S + + Sbjct: 41 INGLATGSLLALAATGLTLIYGILRLTNFAQGEFLTLGAYFTLVANSLGLSLWLAIPLGA 100 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 C + + R + TLI+ I ++ ++ I AG Sbjct: 101 IATIALCLLGEAVLWEPLRRQRVNTTTLIILTIGLSLFLRNLVILIWGAGNQAYRLAVQP 160 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 T+ + + V++G + L+RT+I R I D+ Sbjct: 161 ALTLWG-----------LRITLNSLLVVIGAAAALVLLHWVLQRTSIGKGMRAIADDPDL 209 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + ++ +AG + ++ + + + ILGG+ Sbjct: 210 ARVSGVPVETVIRWTWVIAGGLTAIAGGLYG--LITAVRPTMGWNLILPLFASAILGGIG 267 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S IL EL + + F + L V+++R L Sbjct: 268 SPYGAIAGGLILGFAQELSTYWLPAEYKLAVAF-------------VILIGVLVIRPQGL 314 Query: 340 LRL 342 Sbjct: 315 FAR 317 >gi|325108725|ref|YP_004269793.1| monosaccharide ABC transporter membrane protein, CUT2 family [Planctomyces brasiliensis DSM 5305] gi|324968993|gb|ADY59771.1| monosaccharide ABC transporter membrane protein, CUT2 family [Planctomyces brasiliensis DSM 5305] Length = 328 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 101/313 (32%), Gaps = 20/313 (6%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + L +V L+ A I+ + + +Y + + G ++V+ G + L+ Sbjct: 2 RKILGILGLLIVVCLVTAWNNPAFMKPTNIEQLLHRTSLYGLISLGAALVI-ITGGIDLS 60 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + +L ++Y S+ + +A +S G+ GL K + + + Sbjct: 61 IGSVVGLCGSLLPLLLTQYEWSVGSALAATAAVSICIGLAHGLLITKLKIQPFIVTLCGL 120 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + G + D L + + + + + V L Sbjct: 121 L-----LYRGLARWLTGDSNQRFGDDFASLRWLAKGKLD--------IGLPVELPVVALV 167 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 +S ++L RT + N++A ++A+ +SS G+ G F Sbjct: 168 FFGVSVIAWIFLNRTIWGRHLLALGRNEQAARFSGIATDRLTITAYVLSSFLAGLGGILF 227 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNF 303 A ++ + P + I+ +LGG S+ +A A+L + Sbjct: 228 ALDQNTVQPSAHGSFYELYAIAAAVLGGCSLRGGEGSIIGVAIGAALLRVLYNAIILAGI 287 Query: 304 YYFNSLLKFDCSF 316 Sbjct: 288 PSQLEFAIIGMVI 300 >gi|312198592|ref|YP_004018653.1| urea ABC transporter permease [Frankia sp. EuI1c] gi|311229928|gb|ADP82783.1| urea ABC transporter, permease protein UrtB [Frankia sp. EuI1c] Length = 292 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 90/305 (29%), Gaps = 25/305 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + +M + GL+ G +G++++ +GAY+ +L S G L A + Sbjct: 12 LSIAAVLLMSSLGLTFTFGQMGVINMAHGEFIMVGAYTTYMLQSWAGHEAVLAALPVAFV 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ +L R + TL+++ IL + G+ V Sbjct: 72 VAGLFGVILERTLIRRFYGRPLDTLLLTWGVSLILQQLVRDLIDNRGVQVVAP------- 124 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 V ++ A+I L++ RT R + N++ Sbjct: 125 ---GWLIGGADWGGVRIPYNRVFIFALAIVCLAAIWLYMSRTPAGRRMRAVMQNRELAAC 181 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 F + S G+AG + + +V++GG+ L Sbjct: 182 SAVRTDRVDQLTFFLGSGLAGVAGV--GLTLVGTISPTLGQRYIVDAFLVVVVGGLGQLR 239 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L + ++ F + R L +L Sbjct: 240 GAVIAAFALGLLNSYSEFWTNSSLAKVIVFVVIVAF-------------LQARPQGLFQL 286 Query: 343 RTPSN 347 R+ + Sbjct: 287 RSRAL 291 >gi|254720369|ref|ZP_05182180.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. 83/13] gi|265985388|ref|ZP_06098123.1| inner-membrane translocator [Brucella sp. 83/13] gi|306837464|ref|ZP_07470340.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. NF 2653] gi|264663980|gb|EEZ34241.1| inner-membrane translocator [Brucella sp. 83/13] gi|306407507|gb|EFM63710.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. NF 2653] Length = 328 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 116/327 (35%), Gaps = 27/327 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + +++ + ++ +I+ + L +V G G+ +L + Sbjct: 16 AGLIGIVVIIAASVVGWFLFPDNLALLTRIIAIALLVLSLDLVTGYCGIATLGHAALFGA 75 Query: 77 GAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY I + + L+ + + G+I G L+ G + ++ + +F Sbjct: 76 GAYGAGIAAAHFGITDPILMTVIGLLAGAVTGLISGAVILRATGLAQLVLSIAVVHLFHE 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 K T G G+ G S F +Y +Y + + +S Sbjct: 136 AANKASSWTGGSDGLSGISPDPIFGI------------SEFDLYGRTVYIYTVILLLISF 183 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + ++ R+ R ++++ ++ ++ A+L + +S A G+ GA A S Sbjct: 184 IFLRYVARSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISGAVAGIGGALNAISTQV 243 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + D F+ + +++LGG SL T + + ++ N +++ Sbjct: 244 VGLDSLSFTMLAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVSTANPFHW--------- 294 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 T++ L V+L L Sbjct: 295 -----LTMVGALLIAVVLFAPRGLYGT 316 >gi|237654480|ref|YP_002890794.1| branched-chain amino acid ABC transporter permease [Thauera sp. MZ1T] gi|237625727|gb|ACR02417.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 320 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 112/268 (41%), Gaps = 14/268 (5%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y ++LI + A L+ ++G G+ +L +GAY+ V L S WL Sbjct: 34 YYVGFVRRVLIVAIAASSLNFILGYGGMAALGHAGFIGVGAYTVVALVEAGVSSAWLAWG 93 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 +A+++G +G SL+ RG Y + TL +++ + + G G + L Sbjct: 94 SAAVLAGLFAAAIGAVSLRTRGVYFIMITLAFAQMLHYLAVSL-RTYGGDDGYGLYTPLA 152 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + Y+V+L + ++ + + +A R +RDN+ Sbjct: 153 LGAWLDGAHAQ-------------VFYWVVLAIAAAVFALFSRVAHSRYGHALRGVRDNE 199 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +L + KL+ F + A G+AG A+ +SP + ++++ +++ +V+LGG Sbjct: 200 TRMVALGYPVYRLKLAGFVAAGAVAGLAGGLLASHNAFVSPSIMHWTQSALLLVMVMLGG 259 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYY 305 A+ + + E+ Y+ Sbjct: 260 AGRRWGAPLGVALWLTLEEVLKLYTDYW 287 >gi|288959235|ref|YP_003449576.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288911543|dbj|BAI73032.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 318 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 94/315 (29%), Gaps = 15/315 (4%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + I + +Y + A G ++V LG ++L IGA I G+ G+ Sbjct: 14 PVLFLAQQIINAATVACVYGLLALGYTLVYAILGQINLAMGELTMIGAMVTAIAGAGLGM 73 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + W P + + + + + I+ I + Sbjct: 74 AGWATWPPALLGVLVLVIGFTAVQGWTMDRLVFRRLRGVRGHTPLIVAVGLSIAYQEGVR 133 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL-WLRRTAISNA 209 + + V + +F + + +L + + + +R TA A Sbjct: 134 LLHGARDWWPAPVLTQRFDLASDGAFTVTALTAQLAILALTGGLYAALWGIMRHTAFGRA 193 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R D+ A + + + FA+ AGA A ++ Sbjct: 194 HRACTDDIAAAELVGVDVNRTVAATFAIGGGLAAAAGAVIALYYGGVNFFTGYLI-GFKA 252 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++ ++GG+ S+ A+L V + ++ F L Sbjct: 253 LAAAVVGGIGSVPGAMLGGALLGLVETFWSAYFALAYKDIVAFG-------------LLT 299 Query: 330 LVILMRSHSLLRLRT 344 L ++ R LL Sbjct: 300 LFLIFRPQGLLGQAR 314 >gi|91790942|ref|YP_551893.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91700822|gb|ABE46995.1| inner-membrane translocator [Polaromonas sp. JS666] Length = 305 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 98/307 (31%), Gaps = 15/307 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + L+ + A GL++V G + +++L Y +GA+ + G ++ Sbjct: 10 LNGFQFGLMLFLLAAGLTLVFGIMDMINLAHGSLYMVGAFLTAAVTQASGSYTVGVLSAL 69 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 A + ++ + + +L + I G+ + + Sbjct: 70 AGTAVFGMLLEVSLLRRLYRR----------DHLSQVLATFALILICNEGVRMIWGASPI 119 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + Y +++ ++ + + + +T + R N++ Sbjct: 120 KLNAPEALSRPIELVPGLFYPAHRLLIIVVGIVVAIGLYILVAKTRVGMWVRAGASNREM 179 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 ++ I + F +A +AG+ + S I+ +V++GG+ Sbjct: 180 ATAMGVNIQWLFTFVFGFGAALCALAGSMLSPLMAV--QVGMGESILILAFVVVVIGGIG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRS 336 S+ ++ V L + L + + ++ + + V+ + Sbjct: 238 SIRGAFVGALLIGTVDTLSRTLIPTLLGQFLSPSTTSALGPALASIIIYVLMAAVLFWKP 297 Query: 337 HSLLRLR 343 L R Sbjct: 298 QGLFPAR 304 >gi|187925992|ref|YP_001892337.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|241665477|ref|YP_002983836.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|187727746|gb|ACD28910.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|240867504|gb|ACS65164.1| inner-membrane translocator [Ralstonia pickettii 12D] Length = 293 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 109/303 (35%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y +FA G ++V G LG+++L+ + +GAY+ + + + + L +W + V Sbjct: 6 LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQVVTHFELPLWAALAV 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++SG G+I+ + L + +I Sbjct: 66 GFVVSGVAGLIIDVL--------LLRPLRRRNAPHLIPMIGTIGAGIAINNAMQGVFGAE 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L+ + +++ L A ++L L+RT + A R I ++ K Sbjct: 118 NLRFPAGLVSDASLDLGGIHLMPLELGIIVLSFALMAGLMLLLKRTQLGRALRAIAESPK 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L + L ++A G++G + + P M + + + +++ILGG+ Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLSGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L L + F LFL++L+R Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|288923302|ref|ZP_06417438.1| ABC transporter related protein [Frankia sp. EUN1f] gi|288345362|gb|EFC79755.1| ABC transporter related protein [Frankia sp. EUN1f] Length = 601 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 101/302 (33%), Gaps = 23/302 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + L + + +V G G LSL + AIGA+ V L GL Sbjct: 2 LVLSDGWVTAMSVTLANAVVGLSVLLVTGYAGQLSLAQYLIGAIGAFIAVKLMDALGLPF 61 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 L + + G ++G P+L+ RG LA++TL ++ + + + G+ Sbjct: 62 ELSFLGGVVSAMIIGAVLGAPALRTRGVNLAVSTLGIAISLYALFLANTQLAGSTDGLP- 120 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 G + R+ + + + L + A L R+ A Sbjct: 121 VTTPSLFGLDLDPGEHPRRYAIAVLAVLLVTLLALANLRRGRAGRRLLAVRSNERAAL-- 178 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 +L + AKL AF V++ + + A +R+ F +I + Sbjct: 179 ---------ALGIDVYVAKLYAFMVAAGMAAVGVSLVAFLNERVVFSRFDVFTSITATTS 229 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 ++GG+ L A+L S + L+ L L++ Sbjct: 230 TVVGGIGMLIGPIIGAAVL-----------PNSIVSKFITQWGAADTYLPLVGAILVLLV 278 Query: 333 LM 334 L+ Sbjct: 279 LI 280 >gi|210611480|ref|ZP_03288916.1| hypothetical protein CLONEX_01106 [Clostridium nexile DSM 1787] gi|210151980|gb|EEA82987.1| hypothetical protein CLONEX_01106 [Clostridium nexile DSM 1787] Length = 554 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 27/318 (8%), Positives = 85/318 (26%), Gaps = 9/318 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y I+ + ++ + + + + ++ Q + A G++ ++ G L+ Sbjct: 231 YIAIILIFIMLCIITPMVKGSPLLTYNNVLNILQQASPRMFLALGVAALILLAG-TDLSI 289 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G + I+ + + + + + L ++ Sbjct: 290 GRMVGMGMTTATIIMHQGVNTG--SVFGHIFDFTKMPLGARVILALVMCILLCTVFTTIA 347 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F I+ + + + + V P+ + ++L Sbjct: 348 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIEPAIPNMVIPKINGFPTIILWA 407 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + +T + N +A ++ + + AF ++ G Sbjct: 408 VAAIVIVWIIWNKTTFGKNLYAVGGNPEAASVSGISVFWVTVGAFVLAGVLYGFGSWLEC 467 Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304 + + I+ ++ GG+ +S + I + + Sbjct: 468 VRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVCIFTALTYSLTILGID 527 Query: 305 YFNSLLKFDCSFNMRHTT 322 + + T Sbjct: 528 TNLQFVFSGIIILVAVTL 545 >gi|315641261|ref|ZP_07896338.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315483028|gb|EFU73547.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 292 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 99/303 (32%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y IG++ L + G + + + Sbjct: 8 VVNGLFLGSIYALMALGYTMVYGIIKLINFAHGEIYMIGSFIGYFLIKQLGFGFFPSMII 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ + + I+ LI + +L + Sbjct: 68 AMVGCAILGVVIEFLAYRPLRKSTRISALITAIGVSYLLQNL-----------MIYFFKP 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I + F+ +L FL + + +++T + A R + + Sbjct: 117 DTRPFPQVIARQTYQLGFISVSNIQLLILGVSLFLMILLQVIIQKTRMGKAMRAVSVDAD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G + I M + +LGG+ Sbjct: 177 AAQLMGINVNRTISFTFALGSALAAAGGMLIGLYYNSID-PMMGVVPGLKSFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + + F+ + L +++L+R Sbjct: 236 GVIPGAAIGGFVIGLIETISTALG-------------FSDYKDAFVYGVLIIILLIRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|241206006|ref|YP_002977102.1| urea ABC transporter permease [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859896|gb|ACS57563.1| urea ABC transporter, permease protein UrtC [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 387 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 96/330 (29%), Gaps = 33/330 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 YI S+ + L Y + A L +V G G+LSL +A+G Y+ + R + Sbjct: 40 PLHVPTYIMSLFGKYLTYALLALALDLVWGFCGILSLGHGAFFALGGYAMGMYLMRQIGT 99 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA--- 148 LP F ++ A L++ + + + Sbjct: 100 RGSYGDPVLPDFMVFLNWKDLPWFWFGFNHFWFAALMVLVVPGLLAFVFGWFAFRSRVNG 159 Query: 149 ----------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + D + + F ++ Sbjct: 160 VYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDIIGFSVQADGTRAVLFAATAIFLA 219 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 LS I + R+ +RD + L + KL F VS+ G+AGA + Sbjct: 220 LSLLIASAIVRSKFGKVLVGVRDAESRTRFLGYRVEHFKLFTFVVSAMMAGIAGALYVPQ 279 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P F + +I V+ +GG +L ++ G + G+ Sbjct: 280 VGIINPGEFAPANSIEVVIWTAVGGRATLIGPIIGAILVNGGKTIFTGL----------- 328 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + V L ++ Sbjct: 329 ---FPEFWLFALGGLFVAVTLFLPKGVVGT 355 >gi|306825608|ref|ZP_07458947.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431969|gb|EFM34946.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 289 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y IGA+ L + + + +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMIGAFIGYFLINSFQMDFFLALII 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ + + IA LI + +L G Sbjct: 65 SMAGTALLGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I RF + +L L + L +++T + A R + + Sbjct: 115 -TRAFPQAIETVRFDFGPISLTNVQLMILAVSVLLMVLLQLIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|239908531|ref|YP_002955273.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239798398|dbj|BAH77387.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 301 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 105/282 (37%), Gaps = 13/282 (4%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L + + + Q L + L+ +G G +SL +GA+ V Sbjct: 11 LFFAALAVVGLATPGFQLLAVNQHLFLAVNVLALNFCLGLGGQISLAQAAFAGLGAFGSV 70 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L R+ + +++P + +G ++ P + +LA+ATL +S +F N+++ + Sbjct: 71 LLHDRFPEATLVIVPAVVLGTGLLAAMLSRPMERLGEGFLAMATLCVSLVFTNLVLTLES 130 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G AG RL S R F + ++ ++ L R Sbjct: 131 VTGGSAGHMANARLALPLLGSLSGDRATFFCFAGLLALGSYIFLAL-------------R 177 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + A R + +A SL + +F + AG ISP+ + Sbjct: 178 DSRLGRALAACRGDAQAASSLGVDRAAVRSLSFGLGGGLSAAAGVIHGHYTGFISPEQYH 237 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 ++ + +++GG +L + A +L + + Sbjct: 238 LELSLKALLFLVIGGPGNLLRPILAALVLETAMSWLSVLGDA 279 >gi|260587061|ref|ZP_05852974.1| galactoside ABC transporter, permease protein MglC [Blautia hansenii DSM 20583] gi|331082833|ref|ZP_08331955.1| hypothetical protein HMPREF0992_00879 [Lachnospiraceae bacterium 6_1_63FAA] gi|260542551|gb|EEX23120.1| galactoside ABC transporter, permease protein MglC [Blautia hansenii DSM 20583] gi|330400162|gb|EGG79811.1| hypothetical protein HMPREF0992_00879 [Lachnospiraceae bacterium 6_1_63FAA] Length = 551 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 31/319 (9%), Positives = 89/319 (27%), Gaps = 11/319 (3%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-LSLN 69 Y IL + + + + + + ++ Q + A G++ ++ G LS+ Sbjct: 228 YIAILLIFIALCIITPIVKGSPLLTYNNVLNILQQASPRMFLALGVAALILLAGTDLSIG 287 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 ++ + A + ++ ++ I + +I+ L + Sbjct: 288 RMVGMGMTAATIIMHQGINTGGVFGHIFDFTGMPVIARVILALVVCIVLCTFFTTIAGFF 347 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + F+ I+ + + + + V P+ + ++L Sbjct: 348 TAKFKMH----PFISTMANMLVIFGIVTYATKGVSFGAIEATIPNMVIPKVNGFPTIILW 403 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 A + +T + N +A ++ + AF ++ G Sbjct: 404 AVAAIAIVWFIWNKTTFGKNLYAVGGNPEAASVSGISVFGVTVGAFVMAGVLYGFGSWLE 463 Query: 250 AASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNF 303 + + I+ ++ GG+ +S + I + + Sbjct: 464 CIRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTYSLTILGI 523 Query: 304 YYFNSLLKFDCSFNMRHTT 322 + + T Sbjct: 524 DTNLQFVFSGIIILVAVTL 542 >gi|297199821|ref|ZP_06917218.1| D-ribose ABC transporter permease [Streptomyces sviceus ATCC 29083] gi|197710285|gb|EDY54319.1| D-ribose ABC transporter permease [Streptomyces sviceus ATCC 29083] Length = 645 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 104/314 (33%), Gaps = 29/314 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 +V + + G + + ++G+Q + + A+G++ V+ S G + L+ Sbjct: 24 ALTALIVLVIAMSALSGDFLTTDNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 82 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ A +++G+ +++ + ++ + A G++ G + ATL M + + Sbjct: 83 ALSATVLAWSATQHGVPVFIAVVLAVVTGIAAGLVNGFLIAYGKLPPFI-ATLAMLSVAR 141 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + G +A V+ + +VL Sbjct: 142 GLSLVI------SEGSPIAFPDSVSHLGDTLGGWLPVPVLVMVVMGLLAAFVLG------ 189 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 RT I + I N++A + KL+ +A S F +AG AA Sbjct: 190 --------RTYIGRSMYAIGGNEEAARLSGLRVKKQKLAIYAFSGVFAAVAGVVLAARLS 241 Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308 P + I+ V++GG S IL + +N F Sbjct: 242 SAQPQAAD-GYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLNVSAFWQ 300 Query: 309 LLKFDCSFNMRHTT 322 + + Sbjct: 301 QVVIGVVIALAVLL 314 >gi|325293762|ref|YP_004279626.1| urea/amide ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325061615|gb|ADY65306.1| urea/amide ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 392 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 100/346 (28%), Gaps = 33/346 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 LL A + YI SM + L Y + A L +V G G+LSL +A+G Y+ + Sbjct: 33 LLLPADSAFRIPTYIMSMLGKYLAYALLALALDLVWGYCGILSLGHAAFFALGGYAMGMY 92 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 R + + LP D A L++ + + + Sbjct: 93 LMRQIGTRGVYGHPVLPDFMVFLNWKELPWFWHGFDMFWFAALMVLVVPGLLAFVFGWFA 152 Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + D + + F ++ Sbjct: 153 FRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFSVQADGTRAVLFA 212 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + M LS I + + +RD + L + KL F VS+ G+A Sbjct: 213 MTAVMLALSLLIASGIVNSKFGKVLVGVRDAESRVRFLGFRVENIKLFTFVVSAMMAGIA 272 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA F I+P F + +I V+ +GG +L ++ G G Sbjct: 273 GALFVPQVGIINPGEFSPANSIEVVVWTAVGGRGTLIGPIIGALLVNGGKSYFTG----- 327 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +F + V L ++ R Sbjct: 328 ---------AFPEFWLFALGGLFIAVTLFFPKGIVGTVQHYLVGRR 364 >gi|298241437|ref|ZP_06965244.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963] gi|297554491|gb|EFH88355.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963] Length = 337 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 103/325 (31%), Gaps = 24/325 (7%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS----------- 91 + IY + A G ++V G + L++ + IG+ + + G++ Sbjct: 12 LVAGAIYALIALGYTMVYGIIELINFAHGDIFMIGSMLAIAALTLMGVTGSSHPTGLALA 71 Query: 92 --IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + + + G+++ + + + +A LI + IL + NG Sbjct: 72 GLLIVSCLFAMLGCAVLGVLIERIAYRPLRNAPRLAPLISAIGVSLILEDIGKLWNGINF 131 Query: 150 IYVADRLYFLGTT---------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + + P+ VI ++ L ++ Sbjct: 132 VRFPQIFPRYDYCLWPISLDSVFPPHVTCLARPADTVIITSNNLLDIIMAVVLMIALQWL 191 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + RT + A R + +++A + + F + +A G AG + + Sbjct: 192 VSRTKMGRAMRAVAQDREAAALMGVNVDRVISMTFFIGAALAGAAGFIYGLQYGN-TIYS 250 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F ++ +LGG+ ++ + + E Sbjct: 251 IGFDYGLVAFIAAVLGGIGNIRGAMLGGLFIGVI-EAMTSFIPDSNVYGFGLPHGGGAWT 309 Query: 321 TTLMVIALFLVILMRSHSLLRLRTP 345 ++ L L+++ R LL +TP Sbjct: 310 RAVIFAILILILVFRPSGLLGQQTP 334 >gi|322368597|ref|ZP_08043165.1| inner-membrane translocator [Haladaptatus paucihalophilus DX253] gi|320551881|gb|EFW93527.1| inner-membrane translocator [Haladaptatus paucihalophilus DX253] Length = 379 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 107/340 (31%), Gaps = 40/340 (11%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------RYGLSIWLLI 96 I +L + +FA + G G LS Y GAY ++ + G + + Sbjct: 19 MIPVLYFGLFAMSFDFISGYTGYLSFGHAAFYGTGAYFVILTANDKIPLLPPGTPFMVSL 78 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP---------ITNGK 147 V+ +++ A + +G S + G Y A+ TL +++ + W NG Sbjct: 79 VVAGLVAVALALAIGAVSFRLTGVYFAMITLGFAQVLYVFVRGWDYVGSNPRDGIFLNGA 138 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI--FMYYVLLGMCFLSASIILWLRRTA 205 G+ + + FV YY++ + + + + + Sbjct: 139 NGLNIGVPGVDALNLSIGALTGDEVSLGFVHLGQTEVSYYMIGLVVLVCYFAMQRIIHSP 198 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFS 264 IR+N++ ++ KL AFA+S+ F +AG A +SP + F F Sbjct: 199 FGKVMVAIRENEERAIAVGYDTFRYKLGAFAISAFFAAVAGGLLAGYERTVSPDESFNFL 258 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY-------------------- 304 + I+GG +L+ E Sbjct: 259 VAGDALLASIIGGFGTLAGPLYGQLFNETFREFLSKAGEGGGLLPYLRTHLGSGVMGTTI 318 Query: 305 --YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + N + + L +L + LL Sbjct: 319 YNGLTVQGAIETFLNGHASLYVGTLFVLFVLFVPNGLLGT 358 >gi|283853362|ref|ZP_06370609.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] gi|283571230|gb|EFC19243.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] Length = 305 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 89/304 (29%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ +A G Y VIL S + Sbjct: 8 LINGLTLGGVYALVALGYTMVYGIISLINFAHGEIFAAGGYMGVILLSYLASHGLMESHP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ A + MG ++ + ++L+ ++ + + + Sbjct: 68 WFGLAFALVLAMGYCAMLAMAVEKVAYKPLRGSSRLSVLLSALGMSIFLQNGLMLTQGVY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F + ++ L + + +T I A R ++ Sbjct: 128 DKAYPTEFTQG-GFEFWGLRLNYMQIGIIGVTALLLFLLNALVYKTRIGKAMRATAQDKV 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ + AG + F I + +LGG+ Sbjct: 187 MSALVGINSDRVISTTFAIGAMLAAAAGIMVGLYYGSV-RYDMGFVPGIKAFAAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ ++ V L + + L LV+ Sbjct: 246 GNITGAMIGGLVIGMVEILAAAYIPHG-----------GEYKDVFAFVILILVLYFMPTG 294 Query: 339 LLRL 342 ++ Sbjct: 295 IMGE 298 >gi|190893140|ref|YP_001979682.1| urea or short-chain amide ABC transporter permease [Rhizobium etli CIAT 652] gi|190698419|gb|ACE92504.1| probable urea or short-chain amide ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 387 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 95/330 (28%), Gaps = 33/330 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 YI ++ + L Y + A L +V G G+LSL +A+G Y+ + R S Sbjct: 40 PLHIPTYIMALFGKYLTYALLALALDLVWGFCGILSLGHGAFFALGGYAMGMYLMRQIGS 99 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA--- 148 + LP + D A L++ + + + Sbjct: 100 RGVYGDPVLPDFMVFLNWKELPWFWYGFDQFWFAALMVLAVPGLLAFVFGWFAFRSRVNG 159 Query: 149 ----------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + D + + F ++ Sbjct: 160 VYLSIITQAMTYALLLAFFRNDMGFGGNNGMTDFKDILGFNIQADGTRASLFAATAIFLA 219 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 S I + R+ +RD + L + KL F VS+ G+AGA + Sbjct: 220 SSLVIASAIVRSKFGKVLVGVRDAESRTRFLGYRVEHFKLFTFVVSAMMAGIAGALYVPQ 279 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P F + +I V+ +GG +L ++ G + G+ Sbjct: 280 VGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAILVNGGKTIFTGL----------- 328 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + V L ++ Sbjct: 329 ---FPEFWLFALGGLFVAVTLFLPKGVVGT 355 >gi|153008446|ref|YP_001369661.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] gi|151560334|gb|ABS13832.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] Length = 302 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 98/304 (32%), Gaps = 15/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +GA+ +I+ I L Sbjct: 8 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDVFMLGAFMALIVFLMITTFIGALPIA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ ++ + + +A L S LI ++ + + Sbjct: 68 LMLLLMMIVAMLLTGLWSWTIERVAYRPLRGSFRLAP-LITAIGMSIALSNFVQVTQGPR 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L + + V + V++ L + RT++ A R ++K Sbjct: 127 NKPVPQLLNGSYNIMGTNVTISLKQIVVIVVTAVLLTIFWYIVNRTSLGRAQRACEQDRK 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + + +AG + + IS F + + +LGG+ Sbjct: 187 MAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKAFTAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L +V++ Sbjct: 246 GSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILAIVLIFMPSG 292 Query: 339 LLRL 342 +L Sbjct: 293 ILGR 296 >gi|238791334|ref|ZP_04634973.1| Inner-membrane translocator [Yersinia intermedia ATCC 29909] gi|238729467|gb|EEQ20982.1| Inner-membrane translocator [Yersinia intermedia ATCC 29909] Length = 350 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 94/309 (30%), Gaps = 17/309 (5%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + L++ A GL+ + G G+LS + + Y+Y ++ +G + Sbjct: 36 DSAMIGDFSYFLLWTFCAIGLAAMWGHGGILSFGQTAFFGLAGYTYGVMTLNFGDGVLST 95 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 M + + + + + ++++ + Sbjct: 96 WSGLVMALLVAAAVAAALGYLMFYGGVTGIFIGIVTLSFTLVLETFMSQTAGPQWAIGSA 155 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 + + + + YY+++ + + L R+ + Sbjct: 156 RLNGFNGMSGMPPLSLPWFGGELLTLEGNAFYYLIIVLLAGVYWAVRRLLRSDFGLTLAS 215 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR+N + L I +L F + G++GA + I+P + + + Sbjct: 216 IRENPRRAEMLGIDIRRYQLLVFVLGGVLSGLSGALYTLWGSYITPSSMGLTAAAMPVIW 275 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V G ++ TA+L+ + + + L+ L V+ Sbjct: 276 VATAGRKNIFGTVVITALLVWLSQWLAIYG--------------SEYAMILLGAILLFVV 321 Query: 333 LMRSHSLLR 341 L + LL Sbjct: 322 LAAPNGLLP 330 >gi|150391809|ref|YP_001321858.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF] gi|149951671|gb|ABR50199.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF] Length = 291 Score = 76.1 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 95/306 (31%), Gaps = 26/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + ++Y + A G S+V G L L++ + YA GA+ ++ + LI Sbjct: 6 LVNGLALGMVYALIAVGYSLVFGILRLINFSHGSVYAFGAHMAMVFVGMEYGIVPALIFS 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAI-ATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + I L R A LI + I+ I G Sbjct: 66 IILTGMLGIAIDKLALAPLRAKNSKRIAALITTIGVSYIIQNLLMIVYGSE--------- 116 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + V +++ L + +++T I A R + N Sbjct: 117 --TKFFPKLFDYGNINIGRVSIGTTQLFIVGVSLVLLVLLSYIIKKTKIGLAMRAVEQNH 174 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 KA + + F F + A +AG + + P+M F + S +LGG Sbjct: 175 KAASLMGIDVNFIVTFTFFLGGASAAIAGTLISGYYQVVYPNM-GFLAGLKAFSAAVLGG 233 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + L I+ + + F + L V+L++ Sbjct: 234 IGILHGAIVGGLIVGVSESFAAAYLGGTYRDAVAF-------------VILIAVLLVKPT 280 Query: 338 SLLRLR 343 L + Sbjct: 281 GLFGKK 286 >gi|158316502|ref|YP_001509010.1| ABC transporter related [Frankia sp. EAN1pec] gi|158111907|gb|ABW14104.1| ABC transporter related [Frankia sp. EAN1pec] Length = 940 Score = 76.1 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 105/294 (35%), Gaps = 15/294 (5%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y S+ I+ L + ++V G G++SL A + + Sbjct: 348 DEYWQSLIIRGLALSLVLLSFTVVTGVGGMVSLAQAAFVT-AAGITAGWAVSHHWPFAVA 406 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + ++ A G+++ LP+ + G LA+ATL ++ + QN+ + ++ G +V Sbjct: 407 LLLGTAVATAMGVLVSLPARRLGGLPLALATLALAYLCQNLFFQLSGVSRNDFGGWVLSP 466 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + M L + L+ ++ L R++ A +R Sbjct: 467 PALGPVDLAD--------------PRSMIIFLSVVLGLALLLVSNLIRSSSGRAMAALRS 512 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + ++ + K + FA+S+A G G A+S RI+ + + ++ V+L Sbjct: 513 TEPGAVTIGISAGRTKTAVFALSAAIAGFGGVLLASSSGRITHLDYPVETGLFWLATVVL 572 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 G+ + A E+ + + + + I Sbjct: 573 FGVRRPAAAVIAGLSAAVSPEILSHVAETSYLPQVLSGLAAINLAQNSDGILAL 626 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 86/301 (28%), Gaps = 10/301 (3%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 I + +Y + A G+ + + G+ + AY +V L G+ + Sbjct: 6 NLIVGGAVAGGLYAILAAGVVLTYQTSGIFNFAHGAVAFATAYLFVQLNVTAGVPVVPAA 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIA-----TLIMSEIFQNILIKWKPITNGKAGIY 151 +S ++ ++ + R + +A + + + + N + Sbjct: 66 IISILVFAPLLGLLLDRLVYRRLAHAPLAVKIVVPIGLLIAVPGLCLFISSRLNLWFHLD 125 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +A + V+ + V + + + L+RT + R Sbjct: 126 IAGIEDLFLIPGLGPTPKKTWTLGGVLLDSNQIAVFGAAVLTAVGLWVLLQRTRLGLQMR 185 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 + D + ++ + S G+AG A +P Sbjct: 186 AVVDRRSLAALRGVDPDRTSAVSWMLGSFLAGLAGVLVAPIFTLNTPVFTTVVLISTP-- 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 V+ S+ ++ + L G + N S ++ L+ + Sbjct: 244 AVVFARFRSMPLALAGGLLIGVLQNLIVGYADFAQNIS---GFSTSVPFILLLGLLFVFA 300 Query: 332 I 332 + Sbjct: 301 V 301 >gi|110635651|ref|YP_675859.1| inner-membrane translocator [Mesorhizobium sp. BNC1] gi|110286635|gb|ABG64694.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Chelativorans sp. BNC1] Length = 309 Score = 76.1 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 107/313 (34%), Gaps = 26/313 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + IGA+ + V+ + Sbjct: 8 LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMIGAFISLAVFLILTSVLGFAFLP 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + + ++I V+ + + A G + + + +A LI + +L + + G Sbjct: 68 VVLLIVIIVAMLFTSAWGWTVERVAYRPLRGSFRLAPLITAIGMSIVLQNFVQV---TQG 124 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V + V + + V +++ L A+ L + RT++ A Sbjct: 125 ARVKPLPPQIRGGVTLIEGSTEAGTIVVQLSYMQIIIIVTTVVLMAAFTLLISRTSLGRA 184 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + +A +AG F I F + Sbjct: 185 QRACEQDRKMAALLGVDVDRTISLTFVMGAALAAVAGFMFLLLYGVIDFY-IGFVAGVKA 243 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + G + + F L Sbjct: 244 FTAAVLGGIGSLPGAMLGGLLIGLIEVFWSGYFSVEYKDVAAFS-------------ILA 290 Query: 330 LVILMRSHSLLRL 342 +V++ LL Sbjct: 291 IVLIFLPSGLLGR 303 >gi|28871251|ref|NP_793870.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|301383584|ref|ZP_07232002.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302059989|ref|ZP_07251530.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302132072|ref|ZP_07258062.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854501|gb|AAO57565.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|330878873|gb|EGH13022.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966511|gb|EGH66771.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 307 Score = 76.1 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 93/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + Y + A G ++V G +G+++ Y IG+Y + + + Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +++ A G + + + + + LI + L ++ G Sbjct: 71 LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + L + F S V+ V + + L++ R+ + A Sbjct: 131 AIPNLL-------PGSLSFGPGGSQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F V +A +A + I+ F + Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L + + ++ F + I Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|289676845|ref|ZP_06497735.1| inner-membrane translocator [Pseudomonas syringae pv. syringae FF5] gi|330896319|gb|EGH28414.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str. M301072PT] Length = 307 Score = 76.1 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 95/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + Y + A G ++V G +G+++ Y IG+Y + + + Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +++ A G + + + + + LI + L ++ G Sbjct: 71 LMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + L + F + V+ V + + L++ R+ + A Sbjct: 131 AIPNLL-------PGSLSFGPGGAEEVLISYMQIVVFVVTLVAMTGLTLFISRSRMGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F V +A +A + I+P+ F + Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L + + ++ F + I Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|121611126|ref|YP_998933.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121555766|gb|ABM59915.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 304 Score = 76.1 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 98/300 (32%), Gaps = 15/300 (5%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 + M A GL+++ G +G+++L Y +GAY + G ++ Sbjct: 16 AMLFMLASGLTLIFGIMGVVNLTHGSFYMLGAYCAAFALAHTGSFAAAVVAALLGAGAYG 75 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 +I + + +L + I + + + ++ Sbjct: 76 LLIEFTVIRRLYQR----------DHLYQVLATFGLILFTNEAVSLLFGRRPPLVDMPAV 125 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 ++ + Y + ++ ++ + + RT + R D+++ +L Sbjct: 126 LQGAVPLAPGFEYPVARLAFIVIGALVALGLWWLVNRTRVGMLVRAGADDREMVSALGID 185 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 I F + + G+AG A I ++++GG+ S+ Sbjct: 186 IRKLYTLVFGLGAVLCGLAGVMAAPLLAV--EIGMGERVLITTFVVIVIGGVGSVRGALA 243 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMRSHSLLRLR 343 ++ V L SLL + + + + + + LV+++R L R Sbjct: 244 GALLVGMVDSLGRAFLPQLLESLLTPEVATPLAAGLASASIYLLMALVLIVRPLGLFSSR 303 >gi|115526217|ref|YP_783128.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115520164|gb|ABJ08148.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 433 Score = 76.1 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 115/329 (34%), Gaps = 32/329 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +L + L S + I I ++FA +I++G G+LS + Y +G Sbjct: 24 MWLGVAVLLIVLPHVFSSGGSLTTFSLIGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83 Query: 79 Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 + +I G+++ + + L+ + ++G + G A+ +L ++E+ Sbjct: 84 FLAIHAINLIGGAKWPIPLPLVPVIGGATGLFFAALIGWVMTQRSGTAFAMISLGLAELV 143 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + + G+AGI + + FR +I +YY++ + Sbjct: 144 ASSALILRSFFGGEAGIS------------ANRTKMFRVFDFSFGPQIQIYYLVAAWTLI 191 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + ++ L RT + +RDN + + + AF + F G+AG+ A + Sbjct: 192 AIVLMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFAGLFAGVAGSLAAINF 251 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + + ++ V+ +GG+ + + + Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTLLSLGLSDV------------ 299 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + V++ L L Sbjct: 300 ---TSVWQLYFGLFFIGVVMFTPGGLTGL 325 >gi|83311424|ref|YP_421688.1| ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magneticum AMB-1] gi|82946265|dbj|BAE51129.1| ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magneticum AMB-1] Length = 316 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 121/288 (42%), Gaps = 14/288 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 ++ L + +FA ++++G +GLLS + + AY +GL+ L I + Sbjct: 33 FLMKGLCFGLFAAAFNLLLGYVGLLSFGHAMFFGWSAYVTAYAAKEWGLTPELAILLGVA 92 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 ++ A G ++G +++ +G Y A+ TL ++++ + ++ + Sbjct: 93 LATALGAVVGWLAIRRQGIYFAMITLALAQLGFFVAVQA--------------PMTHGED 138 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ + R F + + MYY +L + LS + + + + IRDN+ Sbjct: 139 GIQGVPRGMLFGLIDLSNTMAMYYFVLAVFVLSLLFLHRVVNSPFGQVLKAIRDNEPRAI 198 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + KL AF +SSAF G+AG+ + S + + V+ + +LGG+ ++ Sbjct: 199 SLGYEVTRYKLIAFVLSSAFAGLAGSLKSLVFQLASLADVSWHMSGEVVLMTLLGGVGTV 258 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +++ + + G+ + + + M+ L Sbjct: 259 LGPMVGAFLVVAIQDFFAGIGSWVIIIQGIIFVVCVLLFRSGMIGVLA 306 >gi|154247823|ref|YP_001418781.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154161908|gb|ABS69124.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 305 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 101/313 (32%), Gaps = 30/313 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---------GSRYG 89 + + IY + A G ++V G +G+++ + + A+ +I S Sbjct: 8 LINGLTLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFMVSAFIGLICVLLLTTVLGMSSIF 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + + + V+ + +G + + + +A +I + +L + + G Sbjct: 68 LILAITLVVAMVFTGLVSWAIERVAYRPLRGSFRLAPMISAIGMSILLSNFVQVAQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + V +I V +++ L A +++T++ A Sbjct: 128 KPLPP-------MVPDVIVVMERNGYQVTLAYKQIIIMVVTATLLAGFWWLVQKTSLGRA 180 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + +A +AG + ++ F + Sbjct: 181 QRACEQDRKMAALLGVNVDRTISLTFVIGAALAAVAGVMYLMYYGVVNF-ADGFVPGVKA 239 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 240 FTAAVLGGIGSLPGAVLGGLLIGLIETLWSAYFSIEYKDVAAFS-------------ILV 286 Query: 330 LVILMRSHSLLRL 342 + ++ LL Sbjct: 287 VTLIFLPQGLLGR 299 >gi|239627687|ref|ZP_04670718.1| inner-membrane translocator [Clostridiales bacterium 1_7_47_FAA] gi|239517833|gb|EEQ57699.1| inner-membrane translocator [Clostridiales bacterium 1_7_47FAA] Length = 293 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 92/305 (30%), Gaps = 26/305 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + Y + A G ++V G L L++ + + Y + + ++ IPV+ Sbjct: 11 LTGISLGGAYALIAIGYTLVYGILRLINFAHGDIFMMAGYFMIFAMASLP--WFIAIPVT 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +++ G+ + + + ++ +I + +L + + Sbjct: 69 LIVTVVLGVTIERVAYRPLRSSPRMSVMISAIGVSYLLQNLATYLFTALPKGYPEIPFLK 128 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + L +IL + T I A R + + + Sbjct: 129 RIYQ----------IGGLSASFVTFLTPVLTLVLVYLLILLINHTKIGMAMRAVSKDYET 178 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + I FAV S G+ + R + P + + GG+ Sbjct: 179 ASLMGIKINKTISFTFAVGSLLAGIGSILYFTDRMTVFPFS-GALPGLKCFVAAVFGGIG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ IL M F+ F I L +++L+R L Sbjct: 238 SIPGAVIGGFILGLGETALVAMGQSTFSDAFTF-------------ILLIVMLLIRPTGL 284 Query: 340 LRLRT 344 +T Sbjct: 285 FGEKT 289 >gi|237798832|ref|ZP_04587293.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021685|gb|EGI01742.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 307 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 86/290 (29%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y + + + +P+ Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + A +I+ + + I I + + Sbjct: 71 LMIAGFAASIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + F + V+ V + + L++ R+ + A R ++ Sbjct: 131 AIPNLFPGSLSFGPGGAQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRACRACAEDM 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F V +A +A + I+ F + + +LGG Sbjct: 191 KMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ +L + + ++ F + I Sbjct: 250 IGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|66047073|ref|YP_236914.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] gi|63257780|gb|AAY38876.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] Length = 307 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 95/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + Y + A G ++V G +G+++ Y IG+Y + + + Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +++ A G + + + + + LI + L ++ G Sbjct: 71 LMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + L + F + V+ V + + L++ R+ + A Sbjct: 131 AIPNLL-------PGSLSFGPGGAEEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F V +A +A + I+P+ F + Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L + + ++ F + I Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|329911205|ref|ZP_08275459.1| putative amino acid transmembrane lipoprotein ABC transporter [Oxalobacteraceae bacterium IMCC9480] gi|327545983|gb|EGF31070.1| putative amino acid transmembrane lipoprotein ABC transporter [Oxalobacteraceae bacterium IMCC9480] Length = 293 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 115/305 (37%), Gaps = 26/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y +FA G ++V G LG+++L+ + +G+Y+ ++L + L +WL + Sbjct: 6 LINALSLGSVYALFALGFTLVFGVLGVINLSHGAIFMLGSYTALLLVEKMALPLWLALLA 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++G G+++ + + ++ +I S +L G Sbjct: 66 AMLVAGLIGLLVDYLVLRPLRKRNAPHLSPMIASIGVAIMLTNLAQGLFGAENKRFP--- 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 I + ++ L +++ +RRT + A R I ++ Sbjct: 123 -------VGTIPEQSISFGDLHVTAVQIGIVAISFLLMIVLLVVMRRTQLGRALRAIAES 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 KA L + L ++A G+AG S + ISP M + + + +++ILG Sbjct: 176 PKAAALLGINVEGLFLLTSFTAAALGGVAGVLVGLSFNAISPFMGQPMLHKGI-AVIILG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM + L + F + F LF+++L+R Sbjct: 235 GMGDIRGAMIGGLFLGFAEVMSVAYLSSDFRDAVAFG-------------LLFVILLVRP 281 Query: 337 HSLLR 341 + Sbjct: 282 SGMFG 286 >gi|218660483|ref|ZP_03516413.1| inner-membrane translocator [Rhizobium etli IE4771] Length = 300 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 96/304 (31%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +G ++ +I+ L Sbjct: 8 LFNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++ ++ + + +A L S ++ I V Sbjct: 68 ILLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +++ L A+ + RTA+ A R ++K Sbjct: 128 KPI---PPMVSSVYQFGNISVSLKQIIIIVITAVLLAAFWYIVNRTALGRAQRATEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + S F+ + + +LGG+ Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASF-ADGFTPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L V++ + Sbjct: 244 GSLPGAVLGGLMIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|294851030|ref|ZP_06791706.1| amino acid ABC transporter [Brucella sp. NVSL 07-0026] gi|294821673|gb|EFG38669.1| amino acid ABC transporter [Brucella sp. NVSL 07-0026] Length = 288 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 72/184 (39%), Positives = 102/184 (55%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ VYP+L+ LG S K++D+ G+QILIYVM AWGL+IVVG GLL L Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 V YA+GAYSY IL S +GLS W+L+P++ +++ G+I+G P L+ RGDYLAI TL Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 EI + +LI W +T G GI + F G + F + + + Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGWPSQRRIINSFSITS 282 Query: 191 CFLS 194 Sbjct: 283 FSCW 286 >gi|84496562|ref|ZP_00995416.1| putative branched chain amino acid transport permease [Janibacter sp. HTCC2649] gi|84383330|gb|EAP99211.1| putative branched chain amino acid transport permease [Janibacter sp. HTCC2649] Length = 307 Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 89/305 (29%), Gaps = 10/305 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G + L++ + IG++ + + V Sbjct: 8 IVNGLTIGSLYALIAVGYTVVYGIVQLINFAHGEVFMIGSF-GALATWTVLFKGQTGLWV 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ ++ L ++ I ++ Sbjct: 67 LPIMILGAVVVSVLTAVVMERLAYRPLRNAPRLAPLITAIGISVFLQEAVRLFYPGAKSK 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L ++ + + + + + + + ++ RT + + + + Sbjct: 127 LVFPDIDVVTGPALSLGGLTIQRAAMFTVGALVVAAFLLWFFVNRTRLGQGMQAVSQDPD 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + AFA+ +A +AG I M F + + +LGG+ Sbjct: 187 TAQLMGINVNRIIVIAFALGAALAAVAGVAQGLLNSNIDFRM-GFLAGLKAFTAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ L + F + + L LV++ R Sbjct: 246 GNIQGAVVGGLTLGIAESMATQFIPGQFGG--------SAWKDVWAFVLLILVLVFRPQG 297 Query: 339 LLRLR 343 LL R Sbjct: 298 LLGAR 302 >gi|296161884|ref|ZP_06844685.1| inner-membrane translocator [Burkholderia sp. Ch1-1] gi|295887903|gb|EFG67720.1| inner-membrane translocator [Burkholderia sp. Ch1-1] Length = 291 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 99/304 (32%), Gaps = 29/304 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIP 97 I ++ + M A GL++V G + +++L IGAY+ + + WL + Sbjct: 4 ILNVASYACVLAMIALGLAVVFGMMDIVNLAHAEWVTIGAYALAVAQAVGGKEAFWLALF 63 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 V+ ++ A G + ++ D L+ + IL K + G + V Sbjct: 64 VAPVVGAALGWCLERFIIRLLYDRPLDT-LLATYAVSLILQKALELVFGTQPMLVYAPFS 122 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 P Y + +V+ ++A L RT R + + Sbjct: 123 ------------GAVPVPGGSYPAYRIFVIGVALTVTAGCWLLFARTRFGTQLRAVIQHP 170 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + AF +A +AG A S S +++LGG Sbjct: 171 AMAEATGIDTRCLNRIAFCGGAALASLAGVLVAPMVSVESH--LGVSYLAKAFFVIVLGG 228 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S++ +A++ L S ++++ +VI R Sbjct: 229 IGSIAGSILGSAVIGTAETLLSYRVDPSLASA-------------MVLVLSIVVIRFRPQ 275 Query: 338 SLLR 341 L+ Sbjct: 276 GLIP 279 >gi|238786874|ref|ZP_04630675.1| Inner-membrane translocator [Yersinia frederiksenii ATCC 33641] gi|238725242|gb|EEQ16881.1| Inner-membrane translocator [Yersinia frederiksenii ATCC 33641] Length = 352 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 39/325 (12%), Positives = 98/325 (30%), Gaps = 17/325 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V +++ + L++ A GL+ + G G+LS + + Y Sbjct: 22 VALLVVMAALALPLVVDSAMIGDFSYFLLWTFCAIGLAAMWGHGGILSFGQTAFFGLAGY 81 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y ++ +G + + + + + + + ++++ Sbjct: 82 TYGVMTLNFGDGVLSTWSGLIVALLVAAAVAAALGYLMFYGGVTGIFIGIVTLSFTLVLE 141 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSAS 196 + + + + + YY+++ + Sbjct: 142 TFMSQTAGPHWAIGSARLNGFNGMSGMPPLSLPWFGGELLTLEGNAFYYLIIVLLAGVYW 201 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L R+ +IR+N + L I +L F + G++GA + I Sbjct: 202 GVRRLLRSNFGLTLASIRENPRRAEMLGIDIRRYQLLVFVLGGVLSGLSGALYTLWGSYI 261 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P + + + V G ++ TA+L+ + + Sbjct: 262 TPSSMGLTAAAMPVIWVATAGRKNIFGTVIITALLVWLSQWLAIYG-------------- 307 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + L+ L V+L + LL Sbjct: 308 SEYAMILLGAILLFVVLAAPNGLLP 332 >gi|256397008|ref|YP_003118572.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928] gi|256363234|gb|ACU76731.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928] Length = 388 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 86/267 (32%), Gaps = 9/267 (3%) Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113 G ++ G LGL+S + A+GAYS + L + ++ +I ++G Sbjct: 55 VGYDLLFGRLGLMSFGHALYVAVGAYSAELAMKDSHLPLAAAALLAIVIGAVVSTLLGAV 114 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 SLK + ++ G + + + Sbjct: 115 SLK---------GVGNLGTVGFAMVTLAFAQAGSILVGRDPKTTGGEEGLPLTTEKVPSA 165 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 V+ + +Y++ L L ++ WL + I W+ IRDN++ L +L Sbjct: 166 LVGVVNTVNLYWLALAYLVLVCGVVWWLTGSRIGKVWQAIRDNERRAEVLGLNPFRYQLG 225 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 AF ++ G +P+ + ++ +V+LGG + + Sbjct: 226 AFVLAGTLGAAGGVVHLLVTAGATPETTTTDFTLALLVMVVLGGSGTRWGPVLGGVLYTL 285 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRH 320 + + + L + Sbjct: 286 LDHRLGAVATSDAVAGLPDVLRIPLSQ 312 >gi|240140119|ref|YP_002964596.1| putative branched-chain amino acid ABC transporter, permease protein [Methylobacterium extorquens AM1] gi|240010093|gb|ACS41319.1| putative branched-chain amino acid ABC transporter, permease protein [Methylobacterium extorquens AM1] Length = 308 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + + + + L + Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQTYLPSLFGAYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + L + +L W + +G Sbjct: 82 AMALAFLASGAMGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRTIFGPREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + S + + + +I +V+ ++ + + + R+ R + N+ + Sbjct: 140 LPSWMMGSIPVTDSIEVQINGLFVIAVTAVITVGVAVLMYRSRFGAQIRAVMSNRPMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + G+AG+ F + + IV+ GG SL Sbjct: 200 VGIDTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ ++++R L L Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VLTLLAVVGILMLRPQGLFTL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|312199216|ref|YP_004019277.1| inner-membrane translocator [Frankia sp. EuI1c] gi|311230552|gb|ADP83407.1| inner-membrane translocator [Frankia sp. EuI1c] Length = 988 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 120/316 (37%), Gaps = 19/316 (6%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 + L + + I I + L +V G G +SL + GA+ L Sbjct: 334 VIGVLALLLTHGSWRAAVIGTFIAAIIGLSLVVVTGYAGQVSLAQLALAGAGAFLLSGLT 393 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + + ++A+ + G+++GLP+L+ RG L + TL ++ + + + I + Sbjct: 394 QSWHVPFPFAPLLAALGATVLGVVIGLPALRLRGLTLGVVTLALAYAIEAVWFRNTQIVS 453 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 + G +L+ L + S F R ++ + + A + LR +A Sbjct: 454 TEGGKVTQPKLFGLDLQIGSGHAFPRLAFGLLVLVVLV---------AVAFGVARLRMSA 504 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + +A +R N+++ + ++ K+ +FA+ S G+ GA A ++ D + Sbjct: 505 LGSAMLAVRANERSAAGIGINVVRIKVISFAIGSFIAGLGGALLAYRFGVVTFDSYSAVG 564 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + ++++ L G+TS+ A + + + + + Sbjct: 565 GLSLLTVAYLAGVTSVWGGVNAGIL----------SSSGIIFIAMDRWVHLGTWFSVITG 614 Query: 326 IALFLVILMRSHSLLR 341 I L I+ + Sbjct: 615 IGLLAAIVGHPEGIAS 630 Score = 44.5 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 83/274 (30%), Gaps = 10/274 (3%) Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G+++ AY+Y L L +P + + L Sbjct: 31 SGVINFATGAIALYVAYTYADLRDGQLLVPIPGLPTTVGLGTDSLGFFPAALGALLIGAL 90 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGI------YVADRLYFLGTTVRSLIRFFRFPSSF 176 A L + + G+ + R+ +V ++ R+ Sbjct: 91 LGALLYAVVFRKLLDAPPLAKAVASLGVLVVIQSVMVIRVGVAPVSVEAIFPADRWKLGS 150 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 ++ +Y+ + + L+ + R T R +Q + + L+ + Sbjct: 151 LLVLSDRFYLAVAVIVLTLVLTAVFRFTRFGLLTRATASSQTGAYVSGVSANRVALTNWM 210 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S A G AG A + ++ ++GG +L A ++ V Sbjct: 211 ISCAVAGAAGILIAPVSPLAPTT--YTLFVVPALAAAVVGGFQNLVPAVIAGLVIGMVQ- 267 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++ +S + S + ++V+AL Sbjct: 268 -AEALSLAAQHSWMPRTGSAELVPLIVIVVALLA 300 >gi|189024869|ref|YP_001935637.1| High-affinity branched-chain amino acid transport system permease protein LIVH [Brucella abortus S19] gi|237816158|ref|ZP_04595153.1| High-affinity branched-chain amino acid transport system permease protein LIVH [Brucella abortus str. 2308 A] gi|254689945|ref|ZP_05153199.1| High-affinity branched-chain amino acid transport system permease protein LIVH [Brucella abortus bv. 6 str. 870] gi|261214752|ref|ZP_05929033.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] gi|297249050|ref|ZP_06932758.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|189020441|gb|ACD73163.1| High-affinity branched-chain amino acid transport system permease protein LIVH [Brucella abortus S19] gi|237788620|gb|EEP62833.1| High-affinity branched-chain amino acid transport system permease protein LIVH [Brucella abortus str. 2308 A] gi|260916359|gb|EEX83220.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] gi|297174183|gb|EFH33540.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] Length = 307 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 103/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 13 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 72 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G C + + + +A LI + L + +T G Sbjct: 73 LMLLLMMIVAMLLTGLCSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S V + V++ L + RT++ A Sbjct: 133 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 182 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 289 IVLIFMPSGILGR 301 >gi|302187250|ref|ZP_07263923.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642] Length = 307 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 95/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + Y + A G ++V G +G+++ Y IG+Y + + + Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +++ A G + + + + + LI + L ++ G Sbjct: 71 LMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + L + F + V+ V + + L++ R+ + A Sbjct: 131 AIPNLL-------PGSLSFGPGGAQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F V +A +A + I+P+ F + Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L + + ++ F + I Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|297626280|ref|YP_003688043.1| High-affinity branched-chain amino acid transport system permease protein BraE (livM, LIV-I protein M) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922045|emb|CBL56609.1| High-affinity branched-chain amino acid transport system permease protein BraE (livM, LIV-I protein M) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 337 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 75/316 (23%), Positives = 123/316 (38%), Gaps = 43/316 (13%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG--LSIW 93 Y I I ++ A L+++ G G SL AIGAY ++ + Sbjct: 48 NDYRLITIATICINIVLATSLNLITGFTGQFSLGHAGFMAIGAYVTALVTIQIDSVWGFV 107 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + A+++ G+++GLP+L+ RGDYLAI TL M+EI + +L+ +TNG AG+ Sbjct: 108 LGLLAGALLASLVGLLIGLPTLRLRGDYLAIVTLGMAEIIRIVLLNL-KVTNGAAGLQGI 166 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + L + S +I + + Sbjct: 167 PQF-------------------------VNWTWLFILTAGSVVLISNYLHSRHGRDSIAV 201 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+++ A S+ K +F V + F G+AG +A+ I PD F F +++ ++ IV Sbjct: 202 REDEIAAESIGVNSTRTKTMSFMVGAFFGGIAGGMYASFFYFIKPDTFNFMKSVDILVIV 261 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ SLS A +L V L + Sbjct: 262 VLGGLGSLSGSVIAAILLAIVSTLLQPFPEIRMILYALILILIMI--------------- 306 Query: 334 MRSHSLLRLRTPSNFL 349 R L+ R S L Sbjct: 307 FRPQGLMGSRELSVKL 322 >gi|146283529|ref|YP_001173682.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145571734|gb|ABP80840.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] Length = 335 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 112/337 (33%), Gaps = 34/337 (10%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 KI + +V LL L + +++L + +FA ++++G GLLS Sbjct: 29 QKIFYAVLLVIALLAPLAVYPVF--------LMKLLCFALFACAFNLLLGYAGLLSFGHA 80 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A G Y + S Y L ++ ++ + R + Sbjct: 81 AFFATGGYITGYMLSSYSGLSTELGILAGTLASTVLGALFGMLAIRRQGIYFAMITLALA 140 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + P T G+ G+ R F + + MYY +L + Sbjct: 141 QLVFFVFVQAPFTGGENGLQGVPR-------------GHLFGLVDMKNNMAMYYFVLAVF 187 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + ++I + + IR+N+ SL + KL AF +S+A G+AGA Sbjct: 188 VIGFAVIQRTIHSPYGQVLKAIRENEPRAVSLGYNVDRHKLLAFVISAALAGLAGATKTV 247 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 S + + VI + +LGG+ ++ +++ + Sbjct: 248 VFQLASLTDAHWHMSGEVILMTLLGGVGTILGPLVGATVVVTLQSSLS------------ 295 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + ++ + L +L+ ++ Sbjct: 296 -NGPLGEWVHVILGVIFVLCVLLFRSGIVGWLERLVK 331 >gi|107029152|ref|YP_626247.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|116687020|ref|YP_840267.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|105898316|gb|ABF81274.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia AU 1054] gi|116652735|gb|ABK13374.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia cenocepacia HI2424] Length = 295 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 59/308 (19%), Positives = 114/308 (37%), Gaps = 19/308 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 ++ + +Y A GL++ G GL++ + +GAY+ I S+ G + Sbjct: 2 SSFVIHLLTVGCLYATMALGLNLQAGYAGLVNFGFIAFSGLGAYAAGI-ASQLGWPLPSA 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + ++ +GA +++ + DY IATL ++EI + I + +T G GI Sbjct: 61 LALALAAAGALAIVVARLGRQLSADYWGIATLAIAEILRTIALNESWLTGGAQGIGGIAP 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L+ + + V G L+ + L + A + +R+ Sbjct: 121 LFPGLRAPWAD--------------LAFLAVTAGCLALTYATYRRLTASRFGRALKVMRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + K A + +AGA A + PD SE + ++V++ Sbjct: 167 EPALAVCFGYDPLALKTRASIAGALPAALAGALAAWYIGYVGPDAMIASETFALWTVVMV 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S + T I+ + + + + L L+ + L +L R Sbjct: 227 GGLGSHVGVLVGTLIV----QAVYALAPFLKDWLGVGSDLTGAVRLGLVGLMLLACVLWR 282 Query: 336 SHSLLRLR 343 H L+ R Sbjct: 283 PHGLVPER 290 >gi|71737923|ref|YP_273672.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257486680|ref|ZP_05640721.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289626714|ref|ZP_06459668.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648002|ref|ZP_06479345.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298488780|ref|ZP_07006808.1| high-affinity branched-chain amino acid transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71558476|gb|AAZ37687.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156698|gb|EFH97790.1| high-affinity branched-chain amino acid transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867290|gb|EGH01999.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330984887|gb|EGH82990.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010152|gb|EGH90208.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 307 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 93/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + Y + A G ++V G +G+++ Y IG+Y + + + Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +++ A G + + + + + LI + L ++ G Sbjct: 71 LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + L + F + V+ V + + L++ R+ + A Sbjct: 131 AIPNLL-------PGSLSFGPGGAQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F V +A +A + I+ F + Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L + + ++ F + I Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|332285151|ref|YP_004417062.1| inner-membrane translocator [Pusillimonas sp. T7-7] gi|330429104|gb|AEC20438.1| inner-membrane translocator [Pusillimonas sp. T7-7] Length = 314 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 125/328 (38%), Gaps = 26/328 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L V+ +L L + + + +ILI + A +++ G G+LS + Sbjct: 4 VITLGVLVFVLALLVALPWIAPFFYIFIATEILILGLLAASFNLIFGYTGMLSFGHAAFF 63 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +G+Y+ +L + + V+ + +++G S++ Y ++ TL + Sbjct: 64 GVGSYATAMLLQSMQWPLLACLLVAVLAGALLALVIGFFSVRLNEVYFSMLTLAFGMMVY 123 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ +W+ +TNG GI + Y+V+L + L+ Sbjct: 124 AVVHQWRSVTNGSDGIAGFMVQS-----------LGLGIDVTLGNPAVYYHVVLVIVVLA 172 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +++ + R++ R IR N + + +L+AF ++ AF G+AG A Sbjct: 173 TALLYLICRSSFGLILRAIRQNPERVAFCGLNVRSYRLAAFTIAGAFAGLAGGLMAPFLR 232 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 SP++ +S + + + ILGG + + + M + Sbjct: 233 IASPELVHWSMSAEPVLMSILGGTGYFLGPFFGAGMFVLLETWITSMTHAW--------- 283 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ I L L+++ +L Sbjct: 284 ------MLVLGIILALMVMFFRRGVLGT 305 >gi|254501258|ref|ZP_05113409.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222437329|gb|EEE44008.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 342 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 102/335 (30%), Gaps = 17/335 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L + +L + + LL + +T + + + ++I+ + A GL++V G + +++ Sbjct: 19 LVQKLPVLLVPVLALAGLLAIGNPSTWLTLTVAGLAMGMMIF-IMASGLTVVFGLMDVIN 77 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 +GA+ + + + + + ++ + G + Sbjct: 78 FGHGAFVTVGAFVGFTVLAWLAGWTASPSVLLNLSALLVAILAAMLITGGLGYAFERVIV 137 Query: 128 I-MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + ++ + R E + Sbjct: 138 KPVYGEHLKQILVTMGGLIVAQQMIHVVWGPDEMHLSRPEALQGSIVLGDAAIEKYRLVA 197 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + L ++ L+ T I R +N + +L + L F SA G+ G Sbjct: 198 VAIGLALFLAMRHILKNTKIGLLVRAGVENGEMVEALGYRVRRLFLIVFMTGSALAGLGG 257 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + ++ I+ M ++V +VI+GG+ S+ ++ + + Sbjct: 258 VMWGLYQETITAHM-GSEIMVLVFIVVIIGGLGSVEGCFIGALLVGLLANYTAFLA---- 312 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + V++ R L Sbjct: 313 ----------PKVALISTIALMVAVLMWRPQGLYP 337 >gi|116071878|ref|ZP_01469146.1| putative membrane protein of ABC transport system [Synechococcus sp. BL107] gi|116065501|gb|EAU71259.1| putative membrane protein of ABC transport system [Synechococcus sp. BL107] Length = 375 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 95/344 (27%), Gaps = 31/344 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L+ + ++ + + + ++ + L + A G+ ++ G GLLSL I + Sbjct: 10 WPLVILWVLIIAAIVAAPSVLPVFRLNLLGRFLALAIVALGIDLIWGFTGLLSLGQGIFF 69 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+G Y+ + + + +A ++ + Sbjct: 70 ALGGYAAAMYLQLNSSGDLPNAIPEFFGLYGVDRLPAFWQPFHSPWFTLVAIWLVPAVLA 129 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTV-----------------RSLIRFFRFPSSFV 177 +L K + L + F Sbjct: 130 AVLGNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTELFGQMVGSA 189 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++V M L+ + W+ R + IRD++ K FA+ Sbjct: 190 EMQRGFFWVTAVMVILAWLSVRWVVRGRFGDVLIAIRDDEPRLRFAGYNPTLFKTIVFAI 249 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ GA + +SP +I ++ V +GG +L + L Sbjct: 250 AGGLAGIGGALYTVQSGIVSPQYMTVPFSIEMVIWVAVGGRGTLVGAILGAVAINYAKSL 309 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+ ++ Sbjct: 310 VSE--------------AMPQSWLFIQGGLFILVVTALPEGVIG 339 >gi|317126141|ref|YP_004100253.1| inner-membrane translocator [Intrasporangium calvum DSM 43043] gi|315590229|gb|ADU49526.1| inner-membrane translocator [Intrasporangium calvum DSM 43043] Length = 369 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 68/329 (20%), Positives = 131/329 (39%), Gaps = 24/329 (7%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L++ + ++A+V L L + Y+ ++ +++ + + G +G +S Sbjct: 15 LSRRAVVGFVIALVVLYLAPLVIP---ISAYLHNVIGLTFMFMAAGLAWNWLGGYVGQIS 71 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + G + V LG +GL WL V M+ G ++ G P+L+ RG Y +IAT+ Sbjct: 72 FGHAAMFGTGGFVAVRLGITFGLPFWLTWLVGGMVGGLYALLWGHPTLRLRGPYFSIATI 131 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + E + I W T G +G+ P + +Y+ Sbjct: 132 GVGEATRLIATYWTSFTGGSSGLS--------------------LPIGSGPTKYQLYWYG 171 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + + WLR++ I I+++ +A + F + +S IG+ G Sbjct: 172 LYLLAGVVVLSYWLRKSRIGLGLLAIKEDVEAAGDVGVNPTFYQDFVLFLSGTVIGVCGG 231 Query: 248 FFAASRDRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 F+A+ + I P DMF F +I + I ++GG+ ++ A + + + E + Sbjct: 232 FYASYQSFIDPLDMFSFDRSISFVLIGVIGGIGTILGPALGAIVFVVIQEFLLASYPQLY 291 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMR 335 L + L + L + I R Sbjct: 292 LGLYGLLLIIVILFEPLGLSGLIMRIARR 320 >gi|322374646|ref|ZP_08049160.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|321280146|gb|EFX57185.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. C300] Length = 292 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 104/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + + +L + + Sbjct: 8 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMDFFLALII 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + + G+++ + + IA LI + +L G Sbjct: 68 SMVGTALLGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I RF + +L L + L +++T + A R + + Sbjct: 118 -TRAFPQAIETVRFDLGPISLTNVQLMILAVSVLLMVLLQLIVQKTKMGKAMRAVSVDSD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|221195806|ref|ZP_03568859.1| putative galactoside ABC transporter, permease protein [Atopobium rimae ATCC 49626] gi|221184280|gb|EEE16674.1| putative galactoside ABC transporter, permease protein [Atopobium rimae ATCC 49626] Length = 553 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 86/308 (27%), Gaps = 9/308 (2%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M F L+ Y IL + + + + + + ++ Q + A G++ ++ Sbjct: 220 MRSFLLQNGLYIVILLVFIGLCVVTPAVKGTQLLTYNNVLNILQQASPRMFLALGVAGLI 279 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G L+ +G + I+ + + + + + + Sbjct: 280 LLTG-TDLSIGRMVGMGMTASTIIMHQGINTG--GVFGHIFDFTGLPIPVRIIFALLTCI 336 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 L ++ F I+ + + + + V P++ + Sbjct: 337 LLCTVFTSIAGFFTAKFKIHPFISTMANMLIIFGIVTYATKGVSFGAIEASIPTAVIPRV 396 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 ++L A + +T + N +A + L AF ++ Sbjct: 397 NGFPTIILWAVAAIALVWFIWNKTTFGKNLYAVGGNPEAAAVSGINVFKVMLGAFVMAGI 456 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGV 294 G + ++ I+ ++ GG+ +S + I + Sbjct: 457 LYGFGSWLECMRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVTTGVLIFTAL 516 Query: 295 VELCCGMN 302 + Sbjct: 517 TYSLTILG 524 >gi|220920379|ref|YP_002495680.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219944985|gb|ACL55377.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 281 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 116/305 (38%), Gaps = 42/305 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 S+ I + + A + +V+ G LSL +GAY+ +L ++G + + Sbjct: 12 YQSLIHGIGVNGLLALSIYVVLAV-GQLSLGQAAFMGVGAYTGALLTVKFGTPFAVSMAA 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A + +++G P+L+ G YLAIAT+ + EI + + + W Sbjct: 71 AAAVPALIALVVGGPTLRLTGVYLAIATIGLGEITRIVFLNWDYAGGA------------ 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + Y L + + ++ R+ + A +R+++ Sbjct: 119 -----------LGLSGIPERGGVGAIYGTLAVVLVGLILVA---RSRVGRAMEAMREDEA 164 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + +++A VSSA G+AG A I P+ + F + ++S +LGG+ Sbjct: 165 AAGVMGVNLPRYRMTALVVSSALAGIAGCLSAHVSSFIGPNEYGFETAVTILSYALLGGI 224 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S AIL + E+ + + + + + + +L Sbjct: 225 GSPVAPVLGAAILTLLPEVLRPLADF---------------RLMVNGLIIVIAVLFMPRG 269 Query: 339 LLRLR 343 +L R Sbjct: 270 ILPWR 274 >gi|146341680|ref|YP_001206728.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146194486|emb|CAL78511.1| putative ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 336 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 106/352 (30%), Gaps = 25/352 (7%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVM 51 MS F R + ++ + L+ + + +Y + Sbjct: 1 MSRFIERHPIWSLVILIAIACLAWLIIAVWPPGLEDAIGRKKVFLSAVFNGITLGGLYFL 60 Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A G +++ G + ++L Y G Y + + G I I +++ ++ Sbjct: 61 VASGFTLIFGLMRNVNLAHGSLYLFGGYVGYGISAATGSWILAFIAAFVVVAVIGVLLQL 120 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 L + G L + + + I L Sbjct: 121 LVFRRMEGQDLRQTMVTIGLSIVFADLMLWAFGGDFYQIQTPAWLIGPVQLPLMTAMKSS 180 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + F+ Y + + G + + L L RT + R D+++ + I Sbjct: 181 GEAVFLQYPLVRLVIFCGSVVIGILMWLALNRTRVGMIVRAGVDDREILAATGVQIQLVF 240 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 + FA + G+AG + + +F + +VI+GGM S+ A I+ Sbjct: 241 VLVFAFGAGLAGIAGVVGGTFQSISPGEDTRFLL--ASLVVVIVGGMGSIPGAALGALII 298 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 +L + + + LV+ +R LL R Sbjct: 299 GLAEQLGSVY--------------IPTYAIVVTFLIMVLVLALRPQGLLARR 336 >gi|75676394|ref|YP_318815.1| branched chain amino acid ABC transporter permease [Nitrobacter winogradskyi Nb-255] gi|74421264|gb|ABA05463.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Nitrobacter winogradskyi Nb-255] Length = 304 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 99/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + + IY + A G ++V G +G+++ + IG + +I Sbjct: 8 LINGVVLGSIYGLIATGYTMVYGIVGMINFAHGDIFMIGGFIALITFLILMSMGLSAVPL 67 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ VS ++ G ++ + + +A L+ + +L+ + ++ G Sbjct: 68 ILLVMLIVSMAVTAVYGWVVERIAYRPLRQSFRLAPLLSAIGMSFVLMNFSQVSQGAQVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + T S + + ++ +L A + RT Sbjct: 128 PIPPLITGGYTLHDSGNFAVQLSNVQIVVVTTTIVLL-------AIFSYIVSRTRFGRDM 180 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +Q L + F + ++ +AG + + M F I Sbjct: 181 RACEQDQTMAALLGVNVDRTISMTFVIGASLAAVAGMMYLLYYGLVDFFM-GFVAGIKAF 239 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL + + + + F L + Sbjct: 240 TAAVLGGIGSLPGAMLGGLAIGLIETFWSAYFSIEYKDVAAFS-------------ILII 286 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 287 VLIFMPTGLLGR 298 >gi|327310794|ref|YP_004337691.1| inner-membrane translocator [Thermoproteus uzoniensis 768-20] gi|326947273|gb|AEA12379.1| inner-membrane translocator [Thermoproteus uzoniensis 768-20] Length = 388 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 101/337 (29%), Gaps = 35/337 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IP 97 + ++ I I IY ++ L++ VG LGL V+ IGA + + ++ L I+ + Sbjct: 36 LQNLSIYIGIYAIYVISLNLEVGYLGLPQFGKVMFLIIGAIAVGGIAAKLILLIYQSYLL 95 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + ++ + ++ L L + + Sbjct: 96 KAIGVAPLSNVGNYCMLYQYSVGSLVNQQLAQNPALGFGYFLLGIALAMALSAALGVLFA 155 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYY-------------------------------V 186 + +R S + YY + Sbjct: 156 YPAIRLREDYLGILLLVSGEFLRVVTYYATPVACGVNGAVIPDPFAWASGETRTLVFFAI 215 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 M ++ + + + R IRD + A I+ ++ A +SAF G+AG Sbjct: 216 TAVMLVVTYLVFDTIGNSPFGRTLRAIRDAETAAAVFGKDIVKFRIRVLAFASAFAGLAG 275 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A A D F I +++ILGG + I + + Sbjct: 276 ALLAYYFDYTILGTFLPIYTFIGWTMLILGGQGNNVGAIVGAVIYYAIQTVLDIYKNALQ 335 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + +A+ LV++ R ++ + Sbjct: 336 A---VLHADPTYLAYAIFGLAIILVLMYRPQGIVPEK 369 >gi|315426798|dbj|BAJ48421.1| branched-chain amino acid ABC transporter permease [Candidatus Caldiarchaeum subterraneum] gi|315426811|dbj|BAJ48433.1| branched-chain amino acid ABC transporter permease [Candidatus Caldiarchaeum subterraneum] Length = 311 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 65/327 (19%), Positives = 125/327 (38%), Gaps = 34/327 (10%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ L + + ++I + I+ M A +++ G +GLLSL + Sbjct: 7 VFIAVLLIVLAILAAAPIAFNLRFIIFILTLTNIFAMLAVSWNLLSGYMGLLSLGHSFFF 66 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A G Y+ IL YG+ + + A++ A G ++GLPSLK RG + A+ TLI+ I Sbjct: 67 AGGGYAAAILSISYGVPPVAAVFLGALVITALGSLIGLPSLKLRGHFFALVTLIIPVIAY 126 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + P G GI+ L+ Y L S Sbjct: 127 QV-TNAIPQLGGHDGIFGIPSLFQSAEAF--------------------YLASLAALAGS 165 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + R+ + + I+D++ A + + KL A+S G+AGAF+A Sbjct: 166 VLVSYLVMRSRLGLIFTCIKDDEIAAKAAGIDVPRYKLLGLAISIFIAGVAGAFYAYLNG 225 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISP ++ + + + + +LGG ++ I+ ++E Sbjct: 226 VISPATYELEKASLPLLMTLLGGRATILGPVVGAFIIETLIETLK-------------IE 272 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 + L+ ++ ++ Sbjct: 273 VLVRARLLIYSALALLIFMVFPSGIVG 299 >gi|226307972|ref|YP_002767932.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226187089|dbj|BAH35193.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 298 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 88/306 (28%), Gaps = 19/306 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S IY + A L +V + G ++ + + IW I Sbjct: 8 LISGLTNGSIYAILALALVVVFRATGTINFAQGELALFTTFV-AWWLTTMSWPIWSAIGA 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G +M ++ +A LI++ L + G + Sbjct: 67 ALALGFLLGALMERLLIRPVQRRSDMAVLIVALGLFTGLNSLAGMLWGSDTKIMPSPFPN 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T VL+ + L + L R+T + R + DN + Sbjct: 127 GPTDY--------ISVGGARVYGDALGVLVALVVLLVLMSLLFRKTRVGLHMRAVADNAE 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + V++A +AG + F I + + GG+ Sbjct: 179 SATLAGVPTSRILAIGWGVAAAIGALAGVLVTPLSPQQLGLTTMFPIFIAASAAALFGGL 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + + + G SL + + + +++ +R + Sbjct: 239 DSLVGAVVGGLTIGVLESMLSGYISVIGGSLQQTSAL----------LIIVVILFVRPNG 288 Query: 339 LLRLRT 344 L + Sbjct: 289 LFGTKK 294 >gi|209546202|ref|YP_002278092.1| branched-chain ABC transporter permease [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539059|gb|ACI58992.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 329 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 128/336 (38%), Gaps = 29/336 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L L + L L + +++L + +FA ++++G GLLS + Sbjct: 16 ALSVQAGFLAIGLLLLLLAPFFFYPIFLMKLLCFALFACAFNLLLGYTGLLSFGHATFFG 75 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 AY +GL L I + + G++MG +++ +G Y A+ TL +S++F Sbjct: 76 GAAYFTAYTVKTWGLPPELGILIGVAGAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFF 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 ++ K ++S+ R F + MYY +LG+ + Sbjct: 136 FCLQAKFTEG--------------EDGIQSVPRGHLFGFIDLNSSTNMYYFVLGVFIIGV 181 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 II + ++IR+N+ SL ++ KL AF +S+A G+AGA + Sbjct: 182 LIIWRFINSPFGMILKSIRENENRAISLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQF 241 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + + + VI + +LGG+ +L +++ + F Sbjct: 242 ATLTDVAWQMSGEVILMTLLGGIGTLIGPLFGAGLVVALENYLATSEFPV---------- 291 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + I + +L+ ++ S + Sbjct: 292 -----TIITGIVFMVCVLIFRRGIIGEFYASRLGRK 322 >gi|187922167|ref|YP_001893809.1| branched-chain amino acid ABC transporter inner membrane protein [Burkholderia phytofirmans PsJN] gi|187713361|gb|ACD14585.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 291 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 92/290 (31%), Gaps = 16/290 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIP 97 I ++ + I ++ A GL+IV G + +++L IGAY+ + + WL + Sbjct: 4 ILNILGYVSILILVALGLAIVFGMMDIVNLAHAEWVTIGAYALAVAQAVGGQQAFWLALF 63 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + G + ++ D L+ + IL K + G + V Sbjct: 64 AAPAVGAFLGWCLERFIIRLLYDRPLDT-LLATYAISLILQKVLELIFGTQPMLVYAPFS 122 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 P Y + +V+ ++A L RT R + + Sbjct: 123 ------------GAVPVPGGSYPAYRIFVIGVALTVTAGCWLLFARTRFGTQLRAVIQHP 170 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + AF +A +AG A S S +++LGG Sbjct: 171 AMAEAAGIDTRRLNRIAFCGGAALASLAGVLVAPMVSVESH--LGVSYLAKAFFVIVLGG 228 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S++ +A++ L S + S + + Sbjct: 229 IGSIAGSILGSAVIGTAETLLSYRIDPSLASAVVLVLSIVVIRFRPQGLI 278 >gi|325290336|ref|YP_004266517.1| urea ABC transporter membrane protein [Syntrophobotulus glycolicus DSM 8271] gi|324965737|gb|ADY56516.1| urea ABC transporter membrane protein [Syntrophobotulus glycolicus DSM 8271] Length = 302 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 92/301 (30%), Gaps = 16/301 (5%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 I+++ A GL I G + ++++ +GAY +L + + + + I Sbjct: 16 SIFILAALGLGITFGLMKVINMAHGEFIMVGAYVTYLLQNLFITHLDKHVFGWYFILAIP 75 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 + + + I L +IL W + + Sbjct: 76 AAFIVAGLMGLILEAAVIRHL-YGRPLDSILATWGVSLVLQQLARSIFGAPNVDVRSPGW 134 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + + + + +++L + + L L ++ R + N+ SL Sbjct: 135 LDGGLVVNQALQFPYKRLFIILLVMTCLVGVFLLLYKSTTGRRIRAVMQNRDMAASLGIN 194 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 FA+ S G+AG A S + + +V+LGG+ +L I Sbjct: 195 TRKIDAYTFAIGSGLAGIAGCALALLGSVGS--TLGSAYIVDTFMVVVLGGVGTLWGIVA 252 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 ++ L+ + + L + + LL + + S Sbjct: 253 GGLVIGISNTTFEFFTNTSMGKA-------------LVFMLVILFLQWKPKGLLSISSRS 299 Query: 347 N 347 Sbjct: 300 L 300 >gi|84683422|ref|ZP_01011325.1| branched-chain amino acid ABC transporter, permease protein [Maritimibacter alkaliphilus HTCC2654] gi|84668165|gb|EAQ14632.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2654] Length = 352 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 126/341 (36%), Gaps = 11/341 (3%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 KI + + L LF + +I ++++ +++G G++S + Sbjct: 4 KITVKIIALSIWGLLLFSPFLFQDVRQIEVAARIAVFIVLVASYDLLIGYTGIVSFAHTM 63 Query: 73 AYAIGAYSYVILGSR---YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + GAY I + + + ++S +++GL SL+ + + A+ TL Sbjct: 64 FFGFGAYGVAIAMKQGDSTWGYWMVGVLAGVLVSAIVAVLIGLLSLRVKAIFFAMITLAA 123 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTT---VRSLIRFFRFPSSFVIYEIFMYYV 186 + + + + T G+ GI + + F T + R + +I YY Sbjct: 124 ASVALVLASQLSSFTGGEDGITYSVQSIFKPATKLLTDDEGKVLRIMDVRMNGKIAAYYF 183 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + C + +L + + + + IR+N+ + ++ + + F +++ +AG Sbjct: 184 VFISCAVLFWAMLRIVASPLGTVLQAIRENEARAEGIGYRVVAYRTAVFVIAATAAALAG 243 Query: 247 AFFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF-- 303 A +A PD F+ I ++ +V++GGM ++ +++ + Sbjct: 244 AVYATWLKYTGPDTTLSFAIMIDILLMVVIGGMGTMWGAVIGATLMVMAQYYLRDLMEVA 303 Query: 304 --YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L D R + I L++ + Sbjct: 304 ANATEALPLLPDLLSPDRWLLWLGIIFILLVYFFPAGIAGT 344 >gi|296272595|ref|YP_003655226.1| urea ABC transporter permease UrtC [Arcobacter nitrofigilis DSM 7299] gi|296096769|gb|ADG92719.1| urea ABC transporter, permease protein UrtC [Arcobacter nitrofigilis DSM 7299] Length = 370 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 99/334 (29%), Gaps = 19/334 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + V + L A + ++ + L + + A L +V G LG+LSL + Sbjct: 26 VVVFVVSFCNLFVPSSSAFYISTFTVTILGKYLAFALLALALDLVWGYLGVLSLGHGAFF 85 Query: 75 AIGAYSYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 A+G Y + R ++ ++ P F L A Sbjct: 86 ALGGYGLAMYLMRQIGDRGVYGNPDLPDFMVFMNLKELPWFWYGFDNPLFTFIMIMLVPA 145 Query: 126 TLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 L + + + + D + + F Sbjct: 146 ILAFVFGWFAFKSRVTGVYLSIITQAMTYALMLAFFRNDMGFGGNNGLTDFKDILGFDLQ 205 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + + L I ++ + + +IRD + + + K+ F Sbjct: 206 ADSTRVGLLIITFLALTLGYLICRFIINSRLGRVIISIRDEESRVRFIGYKVEQYKVFIF 265 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +F +I ++ V +GG +L ++ Sbjct: 266 VVSAILAGIAGALYVPQVGIINPGVFSPLFSIELVIWVAIGGRGTLYGAIIGAIVVNFAS 325 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + L + V+ L Sbjct: 326 TYFTSALPEVWLYALGGLFVLVTLYLPKGVVGLI 359 >gi|89899105|ref|YP_521576.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89343842|gb|ABD68045.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 325 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 99/270 (36%), Gaps = 12/270 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + +I I +FA L +++G G++SL + +GAYS + + + V Sbjct: 38 IINEIAIVALFALSLDLILGFTGIVSLGHAAFFGMGAYSAALFAKLVMPDPLVGLAVGIA 97 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G + L+ + TL ++ I + K +T G G+ LG Sbjct: 98 CAALLGALCSATILRGTDLTRLMVTLGVALILGELANKLDWLTGGADGLQGVMMGPLLGQ 157 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + + L + + I + + IRDN+ Sbjct: 158 ------------FEFDLTGRTAAWYSLTVLLVVFVITRRFVNSPFGATLKAIRDNRLRAM 205 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 ++ + + V++A G AGA A + S D+F+F + V+ I+++GG+ L Sbjct: 206 AIGIAVNSRMALVYTVAAALAGAAGALLAQTTGFASLDLFEFHRSADVMLILVIGGVGWL 265 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + + + + Y+ + Sbjct: 266 YGGITGAIVFKLMQDAISSITPQYWTFWIG 295 >gi|319784917|ref|YP_004144393.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170805|gb|ADV14343.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 328 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 109/328 (33%), Gaps = 28/328 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + + + Y ++ LI+ +FA L G G+L + IG Sbjct: 9 LLIFAACVALAIIYPFFVGGYQLTVIRDALIFGLFAASLDFFWGRTGILCFGHAAFFGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGAC----GMIMGLPSLKFRGDYLAIATLIMSEIF 133 Y ++ +S L+ + ++GA + L RG Y I L M I Sbjct: 69 GYIMALITLNDAISFASLLGIIGAVAGAALVSAIIGYFLFFGGIRGSYFTIVMLAMGVIC 128 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 Q + W +T G +G+ + F + ++ Y + + + Sbjct: 129 QQAAVSWSSVTGGDSGLIGIPPIAFDV----------GGLHVDLSQDLPSYIFVSAIVAV 178 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + + R I+DN+ +L L F +S+A G+AGA + Sbjct: 179 TVLALWSISRGRWGTVLTAIQDNEVRAAALGHNAPLRLLVTFVLSAAIAGLAGALYVCMA 238 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 ++PD+ + VI V +GG +L + + N + Sbjct: 239 GLVAPDLSGLLLSTEVIVWVAVGGRGTLLGPVLGAIFIQRAQQTISSFNPSLWP------ 292 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ +++ + +L Sbjct: 293 --------LLLGCVFVIIVFVLPDGILS 312 >gi|307128897|ref|YP_003880913.1| leucine/isoleucine/valine ABC transporter membrane protein [Dickeya dadantii 3937] gi|306526426|gb|ADM96356.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 308 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 88/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 ++ +++ + I I + R Sbjct: 72 LIGVAFIAAVVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGSRDV 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ L++R + + A R ++ Sbjct: 132 ALPSLIHGQWVLGESNGFAATLSSMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L + F + + +AG I+P F + + +LGG Sbjct: 192 KMASLLGISTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + ++ F L V+L+ Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIGVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|325674013|ref|ZP_08153703.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] gi|325555278|gb|EGD24950.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] Length = 363 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 104/351 (29%), Gaps = 29/351 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + ++ + + ++ + L + + A G+ + G G+L+L + + Sbjct: 9 VWVGFAVAAVVLFGVAPAMLSDFRLNLLAKFLCFAIVAVGIGLAWGRGGMLTLGQGVFFG 68 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +GAY + + M + + A L++ Sbjct: 69 LGAYIMAMHLKIADAELRGDSVPDFMQIAGIRELPSYWTPFADPFTTIAAILLVPAFVAF 128 Query: 136 IL---------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 +L I + + A + + + + FF F S + Sbjct: 129 LLGLGVFKRRVKGAYFAILSQALAAAFAILLIGQQSIGGSNGLNRFRTFFGFNLSDPANK 188 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 ++++ + L + L + +RD ++ L K+ A+ V++ Sbjct: 189 RMLFFIAAAVLLLVVAATRQLMNSRYGELLVAVRDQEERVRFLGYDPANIKVVAYTVAAF 248 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 F G+AGA F ISP +I + V +GG T+L + Sbjct: 249 FAGIAGALFVPIVGIISPADVGIVPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTTLSE 308 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 +F T + +VI + L R Sbjct: 309 --------------NFPSAWTYAQGLLFIVVIGFFPAGIAGLAKLFGRRRR 345 >gi|319939594|ref|ZP_08013953.1| branched-chain amino acid ABC transporter [Streptococcus anginosus 1_2_62CV] gi|319811183|gb|EFW07489.1| branched-chain amino acid ABC transporter [Streptococcus anginosus 1_2_62CV] Length = 289 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 107/303 (35%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + L+ +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYFLINSLHLNFFLALIL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + A G+++ + + + IA LI + L G Sbjct: 65 AMVGTAALGVLVEFLAYRPLRNSTRIAALITAIGVSFFLEYVMVYFVGANTRS------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I R+ + +L+ L + + +++T + A R + + Sbjct: 118 ----FPQVIETVRYNFGPISLTNIQLMILIISLILMVLLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++L+R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILILILLVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|116253480|ref|YP_769318.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258128|emb|CAK09229.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 387 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 97/330 (29%), Gaps = 33/330 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 YI S+ + L Y + A L +V G G+LSL +A+G Y+ + R + Sbjct: 40 PLHVPTYIMSLFGKYLTYALLALALDLVWGFCGILSLGHGAFFALGGYAMGMYLMRQIGT 99 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA--- 148 LP + ++ A L++ + + + Sbjct: 100 RGSYGDPVLPDFMVFLNWKDLPWFWYGFNHFWFAALMVLIVPGLLAFVFGWFAFRSRVNG 159 Query: 149 ----------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + D + + F ++ Sbjct: 160 VYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDIIGFNVQADGTRAVLFAATAIFLA 219 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 LS I + R+ +RD + L + KL F VS+ G+AGA + Sbjct: 220 LSLLIASAIVRSKFGKVLVGVRDAESRTRFLGYRVEHFKLFTFVVSAMMAGIAGALYVPQ 279 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P F + +I V+ +GG +L ++ G + G+ Sbjct: 280 VGIINPGEFAPANSIEVVIWTAVGGRATLIGPIIGAILVNGGKTIFTGL----------- 328 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + V L+ ++ Sbjct: 329 ---FPEFWLFALGGLFVAVTLLLPKGVVGT 355 >gi|89067741|ref|ZP_01155195.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] gi|89046711|gb|EAR52766.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] Length = 391 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 95/361 (26%), Gaps = 35/361 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 +L G + L + A + ++ G G+LSL + +G Y + Sbjct: 28 VLSEGFGVGVISTSFVKTLGKTLCLCLVAVAMDLIWGYAGILSLGHFAFFGLGGYMIGMW 87 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK---------------------------- 116 + ++ + Sbjct: 88 LMFERTRHIVEGALADAALPPTPEEIEAAIGNQVFGVVGSSDLPLIWSFADSLAIQLALV 147 Query: 117 ------FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 + +A ++ ++ + L Sbjct: 148 VLVPGLLALVFGWLAFRARVTGVYLSILTQAMTLGLALYLFQNASGLRGNNGLSGLQNLP 207 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 + ++ ++ L + WL + R IRDN+ L ++ Sbjct: 208 GVTAPQSEVSLWFFWASALALALGYLLSAWLVSGKFGSVIRGIRDNEARVRFLGYSVEHY 267 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 KL+ F +++ G+AGA + I+P +I + V +GG L TA Sbjct: 268 KLAIFTLTACIAGIAGALYYPQAGIINPAEIAPIASIYLAVWVAIGGRGRLYGAVIGTAF 327 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + G ++ + ++ L+ ++ V L + Sbjct: 328 VSLLSSWFTGGQAPDL-TVAGYRVAWVDWWLVLLGLSFVAVTLYAPRGIAGGLERLAGRR 386 Query: 351 R 351 + Sbjct: 387 K 387 >gi|196234610|ref|ZP_03133429.1| inner-membrane translocator [Chthoniobacter flavus Ellin428] gi|196221314|gb|EDY15865.1| inner-membrane translocator [Chthoniobacter flavus Ellin428] Length = 303 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 84/265 (31%), Gaps = 2/265 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L ++ +GA++ L Sbjct: 8 LINGLALGAIYALIALGYTMVYGVLRFINFAHADVLMLGAFAAYYLAPSVAKVFGPSTVP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A+ ++ ++LA L ++ + Sbjct: 68 TALTVMVLSAVICAVIGML-IEFLAYRPLRHRPRLTVLITAIGVSLFIEYTGQHEKVFGA 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ + V+ L A++ ++RT + A R + N++ Sbjct: 127 ATKAFPTLLPQKEIIVGALRCSSNDLVVVGFTAVLLAAMWYIVQRTKVGMAMRAVSFNEQ 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA + G FFA I P M + +LGG+ Sbjct: 187 AASLMGVNVNAIISFTFAIGSALAAIGGIFFAMRAPGIEPLM-GVQPGLRAFIAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303 +L A +L + GM Sbjct: 246 GNLPGAALGGVVLGLIETFFGGMPG 270 >gi|209550648|ref|YP_002282565.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536404|gb|ACI56339.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 300 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 95/304 (31%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +G ++ +I+ L Sbjct: 8 LFNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++ ++ + + +A L S ++ I V Sbjct: 68 VLLLAMLVVAMLMTSLWNWTIERIAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + ++L L A + RTA+ A R ++K Sbjct: 128 KPI---PPMISSVYQFGNISVSLKQIVIILITVVLLAVFWYIVNRTALGRAQRATEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + S F+ + + +LGG+ Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASF-ADGFTPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L V++ + Sbjct: 244 GSLPGAVLGGLMIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|254462421|ref|ZP_05075837.1| urea ABC transporter, permease protein UrtC [Rhodobacterales bacterium HTCC2083] gi|206679010|gb|EDZ43497.1| urea ABC transporter, permease protein UrtC [Rhodobacteraceae bacterium HTCC2083] Length = 409 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 102/352 (28%), Gaps = 35/352 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 +L G + L + A + +V G G+LSL + IG Y + Sbjct: 28 VLSEGFGVGVISTSFVKTLGKTLCLCLVAVAMDLVWGFTGILSLGHFAFFGIGGYMIGMW 87 Query: 85 GSRYGLSIWLL-----------------IPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + ++ + + L +L + + Sbjct: 88 LMYERTRLIVVNSLSQAEIPPTPTEVVDAIGNQIFGVVGSNEFPLIWGFADSLFLQLILM 147 Query: 128 IMSEIFQNILIKWKPITNGKAGIY-----------------VADRLYFLGTTVRSLIRFF 170 ++ ++ W + AG+Y D + L Sbjct: 148 LLVPSLLALVFGWLAFRSRVAGVYLSILTQAMTLALALYLFQNDSGLRGNNGLSGLQNLP 207 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 + + ++ ++ L + WL + R IRDN+ L ++ Sbjct: 208 NVSAPQSVVSLWFFWGSAFALGLGYLLAAWLVNGKFGSVIRGIRDNEARVRFLGYSVEIY 267 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 KL F +++ G+AGA + I+P +I + V +GG L A+ Sbjct: 268 KLVIFTLTAMIAGIAGALYYPQAGIINPAEIAPIASIYLAVWVAIGGRGRLYGAVIGAAL 327 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + G + + L+ ++ V + + L Sbjct: 328 VSLLSSWFTGGQAPDIPLGF-YTIKWVDWWLVLLGLSFVGVTIFTPKGMGGL 378 >gi|189424921|ref|YP_001952098.1| inner-membrane translocator [Geobacter lovleyi SZ] gi|189421180|gb|ACD95578.1| inner-membrane translocator [Geobacter lovleyi SZ] Length = 294 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 100/305 (32%), Gaps = 26/305 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ S IY + G SI+ + G+++ +G + L L +W I Sbjct: 9 QYLLSGLSTGAIYALIGIGFSIIYNATGIINFAQGEFVMLGGMLTLFLMETLKLPLWAAI 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ +++ G++ +++ I+ +I++ ++ + K + Sbjct: 69 PLAVLLATLVGLVFERLAIRPLRKASPISLVIITIGGSILIRGLSMLIWDKDTHALPPFS 128 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +++L L + T A R N Sbjct: 129 GDEPIMIAGATVLPQH-----------FWILGITVVLIGLNKWFFSHTISGKAMRACSYN 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +A + + L +F +S+A +AG A + + I+G Sbjct: 178 PRAAGLVGIDVRRMVLLSFVISAAMGSLAGIIVAPLTM--TSYDVGVMLGLKGFCAAIIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM+S IL + L G+ + + F + L L++ +R Sbjct: 236 GMSSGIPTVIGGLILGVLESLGAGLISSGYKDAIAF-------------VILLLILFIRP 282 Query: 337 HSLLR 341 L Sbjct: 283 QGLFG 287 >gi|39937460|ref|NP_949736.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] gi|39651319|emb|CAE29841.1| possible branched-chain amino acid ABC transport system permease [Rhodopseudomonas palustris CGA009] Length = 341 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 109/337 (32%), Gaps = 17/337 (5%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSM-GIQILIYVMFAWGLSIVVGSL 63 L K D + LL + LL+ +G+ S + ++ + A GL++V G + Sbjct: 14 PLPQAKRDLLPVLLPAILALLMLPLVGSFSSWVTLTVASLAMGMMIFIMASGLTLVFGLM 73 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 +L+ A+GAY ++ +S + + + + S Sbjct: 74 DVLNFGHGAFIAVGAYVATLVLLPLAAMSGADSLLTNLAVLVPAVLAAMAVSGALGVVVE 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 + L + ++ A + F + + Sbjct: 134 RVLILPVYGQHLKQILMTTGGLIVAEQALYALWGPQIIPLPLPTSLRGSFIIGDIAIAKY 193 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 V+L + I L L RT I R +N++ +L + L F V SA Sbjct: 194 RLLVMLVGLVVFVGIQLTLNRTKIGLLIRAGVENREMVEALGYHVKRLFLGVFMVGSALA 253 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+ G +A R+++ +++ +VI+GG+ S+ ++ V + Sbjct: 254 GLGGVMWALYREQV-HASMGNELTVLIFIVVIIGGLGSVGGCFIGALLVAMVANYGGFL- 311 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ + +++ R L Sbjct: 312 -------------VPKLALVSNILLMVAILMWRPRGL 335 >gi|320450223|ref|YP_004202319.1| membrane spanning protein [Thermus scotoductus SA-01] gi|320150392|gb|ADW21770.1| membrane spanning protein [Thermus scotoductus SA-01] Length = 317 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 122/327 (37%), Gaps = 37/327 (11%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ LF+ Q Y + + I + A LS ++G G+ SL IGAY+ + Sbjct: 25 LVGLFVLPLFFQGYTLYLATEAAILGLAAVALSFLLGHGGIPSLGQAAFLGIGAYTLGL- 83 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + GL + + + ++ +++G + GL + G ++ + TL ++ ++ KW +T Sbjct: 84 SLKAGLPLVVGVILAPLVAGLYAFVTGLLLFRTHGIFILMLTLAFGQMVYSVAHKWAGVT 143 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G+ + + ++ M+ + + F + + +L T Sbjct: 144 GGDDGLSLP---------------------ADILSPALMHLASVVLLFSMVAFLRFLLAT 182 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 IR N++ SL KL A+ +++ G+AGA A R +SP + Sbjct: 183 PFGKTLEAIRQNEEKVRSLGVPTFHFKLGAYVLAAFLTGLAGAGLALHRTFVSPHDLFWI 242 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + ++ +V+LGG L A + + + + + Sbjct: 243 TSATLMVMVLLGGSRGLFGAAFGALLYTLIQAWVSSFSELWG---------------LFV 287 Query: 325 VIALFLVILMRSHSLLRLRTPSNFLER 351 + L +L + L R Sbjct: 288 GLLLIGTVLFAREGIWPLLERKLGGNR 314 >gi|293365060|ref|ZP_06611777.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307702230|ref|ZP_07639190.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Streptococcus oralis ATCC 35037] gi|315612829|ref|ZP_07887740.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|291316510|gb|EFE56946.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307624243|gb|EFO03220.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Streptococcus oralis ATCC 35037] gi|315314939|gb|EFU62980.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] Length = 289 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 103/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + + +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMDFFLALII 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ + + IA LI + +L G Sbjct: 65 SMAGTALLGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I RF + +L L + L +++T + A R + + Sbjct: 115 -TRAFPQAIETVRFDLGPISLTNVQLMILAVSVLLMVLLQLIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|160901988|ref|YP_001567569.1| inner-membrane translocator [Petrotoga mobilis SJ95] gi|160359632|gb|ABX31246.1| inner-membrane translocator [Petrotoga mobilis SJ95] Length = 307 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 114/288 (39%), Gaps = 21/288 (7%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 ++ + L + Y + + ILIY+ + +++ G LS + +GA Sbjct: 8 LILVIAIGLLIFLPFYTGAYFLHVVMTILIYMTLSLSWDMML-RTGQLSFGVAGFFGVGA 66 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y ++ + +G++ + I ++ + +G LK RG Y AI TL ++ +F I+ Sbjct: 67 YISIVSFANFGINPLVSIFLAGGFMALIALALGFVVLKLRGIYFAITTLALTTVFSVIIR 126 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +T G +G + F +Y+++L + + + Sbjct: 127 NTPRLTGGASGKVIP-------------------NIIFQGDSSKIYWLILTLALSTILVS 167 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 RT + A +IR ++ S I + F +++A G+ GA ++ +SP Sbjct: 168 EIFSRTRVHFAINSIRTDEVVAKSTGINIFKYLIIIFIITAAIQGITGAVYSQQYGFVSP 227 Query: 259 D-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 + F ++ +++ ++GG+ S +L E + Y Sbjct: 228 ETTFSLDFLLLPMAMALVGGIYSTWGPIIGAIVLGFASEYLKLIMPYG 275 >gi|209550637|ref|YP_002282554.1| urea ABC transporter permease [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536393|gb|ACI56328.1| urea ABC transporter, permease protein UrtC [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 387 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 97/330 (29%), Gaps = 33/330 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 YI S+ + L Y + A L +V G G+LSL +A+G Y+ + R + Sbjct: 40 PLHVPTYIMSLFGKYLTYALLALALDLVWGFCGILSLGHGAFFALGGYAMGMYLMRQIGT 99 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA--- 148 LP + ++ A L++ + + + Sbjct: 100 RGSYGDPILPDFMVFLNWKDLPWFWYGFNHFWFAALMVLVVPGLLAFVFGWFAFRSRVNG 159 Query: 149 ----------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + D + + F ++ + Sbjct: 160 VYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDIIGFNVQADGTRAALFAATAVLLA 219 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 LS + + R+ +RD + L + KL F VS+ G+AGA + Sbjct: 220 LSLLLASAIVRSKFGKVLVGVRDAESRTRFLGYRVEHFKLFTFVVSAMMAGIAGALYVPQ 279 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P F + +I V+ +GG +L ++ G + G+ Sbjct: 280 VGIINPGEFAPANSIEVVIWTAVGGRATLIGPIIGAILVNGGKTIFTGL----------- 328 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + V L ++ Sbjct: 329 ---FPEFWLFALGGLFVAVTLFLPKGVVGT 355 >gi|163758517|ref|ZP_02165605.1| branched-chain amino acid ABC transporter, permease protein [Hoeflea phototrophica DFL-43] gi|162284806|gb|EDQ35089.1| branched-chain amino acid ABC transporter, permease protein [Hoeflea phototrophica DFL-43] Length = 305 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 98/305 (32%), Gaps = 21/305 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + I + A GLSIV G + ++++ + +GA + S +G + + ++ Sbjct: 15 AVTAAILALTAIGLSIVFGVMRVVNVAHGEFFMLGAVFAWSIASFFGSHPAVGFVAAILL 74 Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF- 158 + + + + R DY T++ + I+ + +T G V Sbjct: 75 APLIVGALAAGADRLILQRIDYNPERTIVATIGLLYIIQQATLMTFGPDARPVEPPFNSV 134 Query: 159 --LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 L + + + + + +++ + + I L + RT R + + Sbjct: 135 IALPWLEHTEAGWQVYWPWGLSVTSYKLFIIFAAVAVLSGIWLLMTRTRFGLIMRATQQD 194 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + F + + + + + +VI+G Sbjct: 195 REMAQAFGVPVDRVFAYVFGLGAGLAAVGAVLVVPVQQAHYLMGHDPLL--LSFVVVIIG 252 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL A ++ + + +A+ +V++ R Sbjct: 253 GLGSLPGTVIAAVLIGLTDGIISVFFSPTLAK-------------IIATLAVGMVLVFRP 299 Query: 337 HSLLR 341 L+ Sbjct: 300 RGLMG 304 >gi|262370830|ref|ZP_06064154.1| urea ABC transporter, permease UrtC [Acinetobacter johnsonii SH046] gi|262314192|gb|EEY95235.1| urea ABC transporter, permease UrtC [Acinetobacter johnsonii SH046] Length = 357 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 107/357 (29%), Gaps = 30/357 (8%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLL---LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSI 58 S+FS + I AV+ L L A Y ++ +I+ + A L + Sbjct: 5 SLFSDKPYSALAIAVCFAVMLILPWLHLLPVDSAFHLSAYWVTLIGKIMCLALVALALDL 64 Query: 59 VVGSLGLLSLNCVIAYAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGM 108 V G G+LSL + +A+G Y++ + W +P + S Sbjct: 65 VWGYAGILSLGHGLYFALGGYAFGMYLMRQTAGDSLPDFMRFLSWTELPWYWVGSNHFLW 124 Query: 109 IMGLPSLKFRGDYLAIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 + L L + +I + + + Sbjct: 125 ALALVVLVPGVVAFIFGFFAFRSKIKGVYFSIITQAMTFAAALLFFRNETGFGGNNGFTG 184 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 + + + + L + L IRD++ L Sbjct: 185 FKTILGMDITSAPMRATLCSLTALVLMLCFVGLRHLMNKPYGRVLGAIRDSENRLQYLGY 244 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 ++ KLSA+ +S+ G+AGA + I+P +I + V GG +L Sbjct: 245 RTLWYKLSAWVLSAVIAGIAGALYVPQAGIINPSEMNPVNSIEMAVWVAAGGRGTLIGPI 304 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ GV F ++ ++ +V + ++ L Sbjct: 305 LGAGLINGVKTY--------------FTVAYPEAWLLILGALFIVVTIFLPKGVIGL 347 >gi|56751620|ref|YP_172321.1| neutral amino acids ABC transporter permease NatD [Synechococcus elongatus PCC 6301] gi|81301304|ref|YP_401512.1| integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD [Synechococcus elongatus PCC 7942] gi|25019681|gb|AAL03939.2|U30252_30 LivH [Synechococcus elongatus PCC 7942] gi|56686579|dbj|BAD79801.1| integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD [Synechococcus elongatus PCC 6301] gi|81170185|gb|ABB58525.1| integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD [Synechococcus elongatus PCC 7942] Length = 313 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 94/318 (29%), Gaps = 27/318 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y +FA G ++V LG+++ + +GAY L LL Sbjct: 7 LINGLAIGGVYALFALGYTLVFSILGVINFAHGAVFTLGAYLTYALVGGRFSFNGLLANA 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + S + + L SL G L I + + + + + L Sbjct: 67 ALPFSLPFALALLLGSLLAGGASLLIEQVAFRPLRRRQADPLLTLISSLGVAVFIVNLIQ 126 Query: 159 LGTTVRSLIRFFRFPSS------------FVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 + + + + + + + + T + Sbjct: 127 ILVGAEIYTFPSNIYGDLPSAINLGSSDRPIQIRTVQIILFVVAIAMFSLLTWLINGTRV 186 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 +A + + ++ L F +S G+AG S I+ F + Sbjct: 187 GHALKAVAEDATTASLLGIDPDRYIRLTFFLSGVLGGLAGTLVGTSV-SITGPYFGIAYG 245 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + +S+++LGG+ ++ +L ++ + Sbjct: 246 LKGLSVMVLGGLGNIPGTIAGGLLLGLAEAWV--------------PPQWSGYRDAVAFA 291 Query: 327 ALFLVILMRSHSLLRLRT 344 LF ++L+R L Sbjct: 292 LLFAMLLIRPQGLFSRAR 309 >gi|325970447|ref|YP_004246638.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy] gi|324025685|gb|ADY12444.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp. Buddy] Length = 293 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 93/305 (30%), Gaps = 26/305 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + Y + A G ++V G L L++ + + Y + + + + I ++ Sbjct: 11 LTGISLGGAYALIAIGYTLVYGILRLINFAHGDIFMMAGYFMIFSLASFP--WPVAIVIT 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +++ A G+++ + K ++ +I + +L + Sbjct: 69 LVVTTAMGILIERMAYKPLRSSPRMSIMISAIGVSYLLQNLSTYLFTAIPRGYPEIPILK 128 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + I + +L+ + +T A R + + + Sbjct: 129 RIFQMGELSASFVTILTPALTIVLVIILMVLV----------NKTKTGMAMRAVSKDFET 178 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + I FA+ S G+ + R ++P + + GG+ Sbjct: 179 AKLMGININRVISVTFAIGSFLAGVGSILYFTDRMSVTPFS-GTLPGLKCFVAAVFGGIG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ + V L + + F+ F L +++L+R L Sbjct: 238 NIPGAVVGGFFIGIVETLLVALGYSTFSDAFTF-------------FLLIVMLLVRPTGL 284 Query: 340 LRLRT 344 +T Sbjct: 285 FGEKT 289 >gi|303327417|ref|ZP_07357858.1| high affinity branched-chain amino acid ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] gi|302862357|gb|EFL85290.1| high affinity branched-chain amino acid ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] Length = 297 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 86/303 (28%), Gaps = 22/303 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + +Y + A G ++V G L L++ +GAY +G + +S Sbjct: 12 NALTLGSLYALIAIGYTMVYGILRLINFAHGDILMVGAYFVFFGTFAFGWPWGVAAIMSI 71 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + G+I+ + + D I+ LI + + + Sbjct: 72 AGASLLGVIIERVAYRPLRDAPRISALISAIAVSFFIESLAVVVF----------TGQPR 121 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 ++ + + +V L ++ + RT A R I + + Sbjct: 122 PVLQPEWLVSEWQVGGLRILRLTAFVPTMTAVLVGILLYIVYRTKPGLAMRAISKDIETT 181 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 L + F + SA +G +A ++ P M + + GG+ S Sbjct: 182 RLLGVRVDNIIAFTFCIGSALAAASGIMWALRYPQVHPYM-GIMPGLKAFIAAVFGGIGS 240 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + L V + F + + + LL Sbjct: 241 IQGAVIGGVALGFVEIMTVAFMPELSGYRDAFAFVLLVLVLLI-----------KPTGLL 289 Query: 341 RLR 343 R Sbjct: 290 GER 292 >gi|77457474|ref|YP_346979.1| inner-membrane translocator [Pseudomonas fluorescens Pf0-1] gi|77381477|gb|ABA72990.1| L-leucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein [Pseudomonas fluorescens Pf0-1] Length = 307 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 89/290 (30%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLNVGSMYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIAIAGLTMMGLESVPL 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 ++ +++ + + I I + + Sbjct: 71 LMTVAFIASIVVTSSYGYSIERIAYRPLRGSNRLIPLISAIGMSIFLQNTVLLAQDSKDK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + F + V+ V + + L++ R+ + A R ++ Sbjct: 131 AIPNLIPGNFAFGPGGAHEVLISYMQIVVFVVTLIAMLGLTLFISRSRLGRACRACAEDI 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A + I+P+ F + + +LGG Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ +L + + ++ F + I Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|170734743|ref|YP_001773857.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|169820781|gb|ACA95362.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 295 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 114/308 (37%), Gaps = 19/308 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +I + +Y A GL++ G GL++ + +GAY+ I S+ G + Sbjct: 2 SSFIIHLLTVGCLYATMALGLNLQAGYAGLVNFGFIAFSGLGAYAAGI-ASQLGWPLPSA 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + ++ +GA +++ + DY IATL ++EI + I + +T G GI Sbjct: 61 LALALAAAGALAIVVARLGRQLSADYWGIATLAIAEILRTIALNESWLTGGAQGIGGIAP 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L+ + + V G L+ + L + A + +R+ Sbjct: 121 LFPGLRAPWAD--------------LAFLAVTAGCLALTYATYRRLTASRFGRALKVMRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + K A + +AGA A + PD SE + ++V++ Sbjct: 167 EPALAVCFGYDPLALKTRASIAGALPAALAGALAAWYIGYVGPDAMIASETFALWTVVMV 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S + T I+ + + + + L L+ + L +L R Sbjct: 227 GGLGSHVGVLVGTLIV----QAVYALAPFLKDWLAVGSDLTGAVRLGLVGLMLLACVLWR 282 Query: 336 SHSLLRLR 343 H L+ R Sbjct: 283 PHGLVPER 290 >gi|27378496|ref|NP_770025.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] gi|27351644|dbj|BAC48650.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 336 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 90/305 (29%), Gaps = 16/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G +++ G + ++L Y G Y + + G + I Sbjct: 48 VFNGITLGGLYFLVASGFTLIFGLMRNVNLAHGSLYLFGGYVGYAISTATGSWLLSFIVA 107 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + ++ + + G L + + + I L Sbjct: 108 FVLTALVGVLLQVIVFRRMEGQDLRQTMVTIGLSIVFADLMLWACGGDFYQIQTPSWLIG 167 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ Y + + + + L L RT I R D++ Sbjct: 168 PVDLPLITAVKSSGEPVYLRYPVVRLVIFAASVVIGVGMWLALNRTRIGMIIRAGVDDRD 227 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I + FA + G+AG + + + +VI+GGM Sbjct: 228 MLAATGVRIQLVFVLVFAFGAGLAGIAGVVGGTFQSL--SPGEDIRFLLASLVVVIVGGM 285 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A I+ +L + + + LV+ +R Sbjct: 286 GSIPGAALGALIIGLAEQLGSVY--------------IPTYAIVVTFLIMVLVLAIRPQG 331 Query: 339 LLRLR 343 LL R Sbjct: 332 LLARR 336 >gi|332286049|ref|YP_004417960.1| putative permease component of branched-chain amino acid transport system [Pusillimonas sp. T7-7] gi|330430002|gb|AEC21336.1| putative permease component of branched-chain amino acid transport system [Pusillimonas sp. T7-7] Length = 410 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 117/328 (35%), Gaps = 34/328 (10%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++ L L + + IQ+LI +FA +++ G G+LS +AIG Sbjct: 6 LFIIAVLFAMLLALPLYLPTSLVNAAIQMLIAALFASAFNVLAGQGGMLSFGHSAYFAIG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD----YLAIATLIMSEIF 133 ++ + + + L P ++ G +G+ + F Y ++ TL ++E+ Sbjct: 66 TFATIHGMNALDETGLLPTPFMPLLGALAGCGLGIVAGWFSTQRSGVYFSMITLALAELL 125 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + K I G+ G+ + S I +YY+ L L Sbjct: 126 HTLAPHLKDIFGGEGGVSAMRMPAWGFNFGTS---------------IEVYYLTLAWVAL 170 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 +++ RT + +R+N + + + F +S+ F G+AGA A + Sbjct: 171 GIALLYCFTRTPLGRLCLGLRENSHRLKFMGYNVHKLRTMVFTISATFSGLAGALLAMNN 230 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + + +F + + V+ +GG+ + A A++ M + Sbjct: 231 EAANYVLFDMTLSTQVVLNSYIGGIGAFFGPALGAAVMTFFGYAVSDMTRTW-------- 282 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 + LV++ L Sbjct: 283 -------LLYQGVIFVLVMMFMPAGLFS 303 >gi|320327043|gb|EFW83057.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330877004|gb|EGH11153.1| high-affinity branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 307 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 93/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + Y + A G ++V G +G+++ Y IG+Y + + + Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +++ A G + + + + + LI + L ++ G Sbjct: 71 LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + L + F + V+ V + + L++ R+ + A Sbjct: 131 AIPNLL-------PGSLSFGPGGAQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F V +A +A + I+ F + Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L + + ++ F + I Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|134291187|ref|YP_001114956.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134134376|gb|ABO58701.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia vietnamiensis G4] Length = 291 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 90/304 (29%), Gaps = 29/304 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIP 97 + ++ + I + A GL+I+ G + +++L IGAY+ + + W + Sbjct: 4 VLNILSYVSILTLVALGLAIIFGLMDIVNLAHAEWVTIGAYTLAVAQSLGGAHAFWFALF 63 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + G + ++ + L + + + + Sbjct: 64 AAPAVGAVLGWCLERLVIRLLYERPLDTLLATYAVSLIVQKALELVFG------------ 111 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + P Y + V+ ++ L RT R + + Sbjct: 112 -THPMLVYAPVDGAIPVPGGSYPAYRLVVIGVALAVTGGCWLLFARTRFGTQLRAVIQHP 170 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 ++ AF +A +AG A S + +++LGG Sbjct: 171 AMAEAVGIDTRRLNRLAFCGGAALASLAGVLVAPMVSVESH--LGVAYLAKAFFVIVLGG 228 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S++ +A + L S ++++ ++I R Sbjct: 229 IGSIAGSLFGSAFVGTAETLLSYRVDPSLASA-------------IVLVLSIVLIRFRPQ 275 Query: 338 SLLR 341 LL Sbjct: 276 GLLP 279 >gi|256045388|ref|ZP_05448282.1| high-affinity branched-chain amino acid transport system permease protein livH [Brucella melitensis bv. 1 str. Rev.1] gi|260565719|ref|ZP_05836202.1| high-affinity branched-chain amino acid transport system permease LIVH [Brucella melitensis bv. 1 str. 16M] gi|265991817|ref|ZP_06104374.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1] gi|260151092|gb|EEW86187.1| high-affinity branched-chain amino acid transport system permease LIVH [Brucella melitensis bv. 1 str. 16M] gi|263002773|gb|EEZ15176.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1] Length = 302 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 101/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 8 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 68 LMLLLMMIVAMLLTGLWSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S + V++ L + RT++ A Sbjct: 128 KPVPQLLNGSYELF----------GSGGTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 284 IVLIFMPSGILGR 296 >gi|148255807|ref|YP_001240392.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146407980|gb|ABQ36486.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 351 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 108/337 (32%), Gaps = 17/337 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K+ ++ A + ++ + + + + + + A L+ + G G+LS Sbjct: 1 MPKHVRLALQAAGILLAIVAIAVVPSVIELFALMQLTLFAAMAVLALSLAFIWGFGGILS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + +G Y+Y I + S ++ A+ + ++ + Sbjct: 61 FGQTAFFGLGGYAYAIAAVNFQDSTPAILLAIAVPALFAAILGYFIFFGR---ISDVYLG 117 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +++ IL T+G A L F S V+ ++ Sbjct: 118 VITLTVTLILFNSVNSTSGDAYKIGKALLGGFNGMPAVPTFNVPFDPSTVLSPEQSWWTT 177 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 G+ ++ L +R+N+ L K F + A G+AGA Sbjct: 178 AGVLLAVFLMLRLLLALPAGRVIVAVRENEVRASLLGYDPRLVKCLTFILGGAIAGLAGA 237 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + +SP +F S + +I + +GG+ +L ++ +V N Sbjct: 238 LYVNWGAFVSPTIFSLSLSAEIIIWITVGGLGTLLGPIIGCVVIEYIVAYIGSQQLLNSN 297 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 ++ L + +L+ ++ Sbjct: 298 --------------LVLGGVLVIFVLLLPKGIVPTAR 320 >gi|322385048|ref|ZP_08058698.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321270958|gb|EFX53868.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 293 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 107/303 (35%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y IGA+ L + L+ ++ + + Sbjct: 9 LANGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMIGAFMGYYLINTLHLNFFVALIL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + + G+++ + + + IA LI + +L G Sbjct: 69 SMVGTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFLLEYGMVFFVGANTRS------- 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I+ R+ + +L L + +++T + A R + + Sbjct: 122 ----FPQVIKTVRYTLGPISISNIQLMILGISILLMVGLQFIVQKTKMGKAMRAVSVDSD 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + I +LGG+ Sbjct: 178 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGIKSFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + + ++ L +++L+R Sbjct: 237 GIIPGAALGGFVIGLLETFATAVG-------------LSDFRDAIVYAILIIILLVRPAG 283 Query: 339 LLR 341 +L Sbjct: 284 ILG 286 >gi|298292397|ref|YP_003694336.1| urea ABC transporter permease UrtC [Starkeya novella DSM 506] gi|296928908|gb|ADH89717.1| urea ABC transporter, permease protein UrtC [Starkeya novella DSM 506] Length = 390 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 89/329 (27%), Gaps = 36/329 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86 + + L Y A GL + G G+LSL + + +G Y + Sbjct: 37 DNFRLQFVGKYLTYAFVALGLVLCWGYAGILSLGQGVFFGLGGYCMAMFLKLEASSVENT 96 Query: 87 ----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + +P + G L L + + + Sbjct: 97 KIQTTPGIPDFMDWNQITALPWFWEPFRSFGFTTIAVVLVPAFFALLVGYALFKRRVGGV 156 Query: 137 LIKWKPITNGKAGIYVA---DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + L + + +Y+V + + Sbjct: 157 YFAIITQALAAIMTILIIGQQGYTGGINGITDLRTLHGWDIRTDSAKTVLYFVCVALLIG 216 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + +++ + + +RD + + K+ F ++++ + GA F Sbjct: 217 CILLAYYVKSSKLGRILVAMRDKEDRVRFSGYDVSSFKIFVFCLAASLSAIGGAMFTLQV 276 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG S+ T ++ F Sbjct: 277 GFMSPSFVGIVPSIEMVIYTAVGGRLSILGAIYGTLLVNWAKT--------------SFS 322 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 SF + V+L+ + + L Sbjct: 323 ESFPELWLFGLGGMFIAVVLIFPNGIAGL 351 >gi|295111647|emb|CBL28397.1| amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) [Synergistetes bacterium SGP1] Length = 293 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 23/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +I S IY + A G ++V G +L+ +GAY +RY L + Sbjct: 5 SFIISGISLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVCFYAVARYQLPAVAGV 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + G+++ + K ++A LI + L + + Sbjct: 65 ALAMFVCTILGIVVERLAYKPLRQAPSLAVLITAIGVSYFLQNSALLLWTSNPKIFPSVV 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++ + ++ + RT + A R ++ Sbjct: 125 GKGTLKFFG---------GQLSISYVTIVTVVTCVVIMLALTWFTGRTRMGKAMRACSED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ S +AGA ++ + I + + G Sbjct: 176 KGAAQLMGINVDATISMTFAIGSGLAAVAGALLCSAYPTL-MPTTGSMPGIKAFTAAVFG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + + ++ L +V+L++ Sbjct: 235 GIGSIPGALFGGLLLGVIEIFAKAYISTQLSDA-------------VVFAVLIVVLLVKP 281 Query: 337 HSLLR 341 LL Sbjct: 282 AGLLG 286 >gi|225027548|ref|ZP_03716740.1| hypothetical protein EUBHAL_01805 [Eubacterium hallii DSM 3353] gi|224955124|gb|EEG36333.1| hypothetical protein EUBHAL_01805 [Eubacterium hallii DSM 3353] Length = 549 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 29/318 (9%), Positives = 83/318 (26%), Gaps = 9/318 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y I+ + + + + + ++ Q + A G++ ++ G L+ Sbjct: 226 YIAIILIFVALCVITPIKKGTPLLTYNNVLNILQQASPRMFLALGVAGLILLTG-TDLSV 284 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G + I+ + + + + + L ++ Sbjct: 285 GRMVGMGMTAATIIMHQGINTG--TVFGHTFDFTNIPVGGRVVLALVVCIVLCTVFTSIA 342 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F I+ + + + + V P+ + ++L Sbjct: 343 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGSIEATIPNMIIPKVNGFPTIILWA 402 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + +T + N +A ++ L AF ++ G Sbjct: 403 LAAIIIVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFAVTLGAFIMAGILYGFGSWLEC 462 Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304 A + ++ I+ ++ GG+ +S + I + + Sbjct: 463 ARMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVCIFTALTYSLTILGID 522 Query: 305 YFNSLLKFDCSFNMRHTT 322 + + T Sbjct: 523 TNLQFVFSGIIILVAVTL 540 >gi|91780287|ref|YP_555494.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692947|gb|ABE36144.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia xenovorans LB400] Length = 290 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 105/307 (34%), Gaps = 26/307 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +++ + + + Y + A GL+++ G + +++ Y +G + +R GL + + Sbjct: 6 QFLVNGVVIGVFYALSALGLTLIFGLMRVVNFAHGEFYMLGGILGWFVTTRLGLDFFSGL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + A++ A G ++ ++ A ++++ ++ + G A V + Sbjct: 66 AIVAVVMAAFGWVIDRLLIERVRHQGEEAGILLTIGLSIVIANVALLVVGTAPHKVVGPV 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 V+ L L A+ + RT + A R + Sbjct: 126 SDAPV-----------LLGPVVLTRVRLVALAIAALLVAAAHGLIHRTTLGRAMRATFQD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 A S FA+ + ++G A+ + ++ +VILG Sbjct: 175 PMAARLAGIRTERIYASTFALGTTIAALSGMLLASIYSA--QVSIGGTVSLKAFVVVILG 232 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM S + +L V + G L+ F + + ++L R Sbjct: 233 GMGSFAGAIVGGLVLGIVEAMWGGYLSTNLVDLVGF-------------VLVIALLLFRP 279 Query: 337 HSLLRLR 343 + L LR Sbjct: 280 YGLFSLR 286 >gi|303246754|ref|ZP_07333031.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] gi|302491771|gb|EFL51651.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] Length = 305 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 90/304 (29%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G ++V G + L++ + +A G Y VIL S + Sbjct: 8 FINGLTLGGVYALVALGYTMVYGIIALINFSHGEIFAAGGYMGVILLSYMTSKGLMATHP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ A + MG ++ + ++L+ ++ + + + Sbjct: 68 WFGLAFALILAMGYCAMLAMAVEKVAYKPLRQSSRLSVLLSALGMSIFLQNGLMLTQGVY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + V ++ L + + RT I A R ++ Sbjct: 128 DKAYPTEFTHG-GFEAWGVRVSYMQIGIIGVTALLLFLLNALVFRTRIGKAMRATAQDKV 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ +A AG + F I + +LGG+ Sbjct: 187 MSALVGINSDRVISTTFAIGAALAAAAGIMVGMYYGSV-RYDMGFVPGIKAFAAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ I+ V L + + L LV+ Sbjct: 246 GNITGAMIGGFIIGMVEILAAAYIPHG-----------GEYKDVFAFVILILVLYFMPTG 294 Query: 339 LLRL 342 ++ Sbjct: 295 IMGE 298 >gi|282900112|ref|ZP_06308069.1| inner-membrane translocator [Cylindrospermopsis raciborskii CS-505] gi|281194994|gb|EFA69934.1| inner-membrane translocator [Cylindrospermopsis raciborskii CS-505] Length = 368 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 120/371 (32%), Gaps = 60/371 (16%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +Y+ + I + +FA GL++ G GL+S + +GAY+ VIL + ++L Sbjct: 2 SEYLIFLAISTATFSLFALGLNLQWGFTGLISFGHIAFMTLGAYTTVILSLKGIP-LFLS 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK-----PITNGKAGI 150 A+++ G+++G +L+ R DYL I T+ E+ + + +G GI Sbjct: 61 AVAGAIVAALLGLVIGFATLRLREDYLGIVTIGTGELIRLVFNNQDLPVGDRWISGAFGI 120 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY------------------------- 185 + + + +F + Sbjct: 121 QSYVIPLATTPNLLFRLVMIGVLTLLTSVTLFSLWRWVKNTRKNNHRAEFTSHLVVGIIL 180 Query: 186 --------------------------VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 ++L + + +L ++ + IR++++ Sbjct: 181 GLLSLAIYIAGVLGLYNYNPKAGLMLLVLLVLAFVFWRLEFLVQSPWGRVLKAIREDEEV 240 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L + KL + + A G+AGAFFA I PD F+ +VILGG Sbjct: 241 PKALGKNVFSYKLQSLILGGAIAGIAGAFFAWQLSAIYPDNFQPQLTFDAWIMVILGGSG 300 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + I L + L +++ R + Sbjct: 301 NNLGTILGAVIYFAYDALTREFLPKIVPLD---AERIGAFRIMFIGFILMSLMIWRPQGI 357 Query: 340 LRLRTPSNFLE 350 L + + Sbjct: 358 LGKKEELTLGK 368 >gi|254469872|ref|ZP_05083277.1| inner-membrane translocator [Pseudovibrio sp. JE062] gi|211961707|gb|EEA96902.1| inner-membrane translocator [Pseudovibrio sp. JE062] Length = 306 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 105/305 (34%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + L + A GL++V G +GL++L Y IGA+ + + G L Sbjct: 10 ILNGLQFGLTLFLMAAGLTLVFGVMGLINLAHGSLYMIGAFCCAWITQQTGSFWLGLGGG 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + A +I L + + +L + I G + Sbjct: 70 VLGAAAAGALIEMLVIRRLYDR----------DHLDQVLATFALILIFSEGTRMVFGSMP 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + + Y ++ +++L ++ + + + +T + R +++ Sbjct: 120 LYLNIPEALSGTVALPGVEAYPVYRLFIILAALAVAVLLYMLISKTRLGMRIRAGESDRE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L I FA+ +A G++G A R I+ ++++GG+ Sbjct: 180 MIAALGVDIKTLYTIVFALGAAIAGLSGTLVGALRSV--QVGMGEPVLILAFVVIVIGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMR 335 S+ + ++ V L ++ + ++ L+ + + ++ ++ Sbjct: 238 GSIKGALIGSILIGLVDTLGRIFLPVILKFFMENASANSVGAALSSMLIYLMMAGILAVK 297 Query: 336 SHSLL 340 L Sbjct: 298 PKGLF 302 >gi|23502645|ref|NP_698772.1| branched-chain amino acid ABC transporter permease [Brucella suis 1330] gi|254703557|ref|ZP_05165385.1| branched-chain amino acid ABC transporter, permease protein [Brucella suis bv. 3 str. 686] gi|261754192|ref|ZP_05997901.1| inner-membrane translocator [Brucella suis bv. 3 str. 686] gi|23348652|gb|AAN30687.1| branched-chain amino acid ABC transporter, permease protein [Brucella suis 1330] gi|261743945|gb|EEY31871.1| inner-membrane translocator [Brucella suis bv. 3 str. 686] Length = 302 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 103/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---------GSRYG 89 + + IY + A G ++V G +G+++ + +GA+ +I+ Sbjct: 8 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFTGMLPVA 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 68 LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S V + V++ L + RT++ A Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 284 IVLIFMPSGILGR 296 >gi|156741872|ref|YP_001432001.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941] gi|156233200|gb|ABU57983.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941] Length = 393 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 99/318 (31%), Gaps = 19/318 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-----------ILGSR 87 I ++ +Y A G ++V G L ++ + +GA+ + Sbjct: 75 IVDGLVRGFLYATIALGYTMVYGVLEFINFAHGEIFMVGAFVGAFFSAALASSGMLTTLS 134 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL---IKWKPIT 144 L + + + +SG M + + + + + LI + +L ++ + Sbjct: 135 PILFVIAAVLLGMAVSGVLAMSIERVAYRPLRNAPRLVPLISAIGVSLVLQDVMRMIAVN 194 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G V + + + V + ++ + + + T Sbjct: 195 TGLGFNAQFRTPDLGQPLVLAQMPISDERTIPVSIDSRSLIFIVVAILMLIGLNYLVNIT 254 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + A R + ++ A + + F + A G AG F I+P + F Sbjct: 255 KLGKAIRAVAQDRPAASLMGIDVNRVIAITFLIGGALGGAAGILFGMRVGTINPYV-GFL 313 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + + +LGG+ +++ +L + + S + Sbjct: 314 PGLKAFTAAVLGGIGNITGAMVGGIVLGFLEAFVASYLSLFTRG----QFSGASYADIVA 369 Query: 325 VIALFLVILMRSHSLLRL 342 L L+++ R LL Sbjct: 370 FSILILILIFRPSGLLGE 387 >gi|86358924|ref|YP_470816.1| amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86283026|gb|ABC92089.1| amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 300 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 91/304 (29%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +G ++ +I+ L Sbjct: 8 LFNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++ ++ + + +A L S ++ Sbjct: 68 ILLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSN---FIQVTQG 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + ++L L + TA+ A R ++K Sbjct: 125 PRNKPIPPMVSSVYQFGNISVSLKQIIIILITVVLLTVFWYIVNHTALGRAQRATEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + S F+ + + +LGG+ Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASF-ADGFTPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L V++ + Sbjct: 244 GSLPGAVLGGLMIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|157737052|ref|YP_001489735.1| ABC transporter, permease protein [Arcobacter butzleri RM4018] gi|157698906|gb|ABV67066.1| ABC transporter, permease protein [Arcobacter butzleri RM4018] Length = 368 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 103/333 (30%), Gaps = 19/333 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + V + L+ + ++ + L + + A L +V G LG+LSL + Sbjct: 26 VVVFVVSFCNLVIPSDSVFHISTFTVTLLGKYLAFALLALALDLVWGYLGVLSLGHGSFF 85 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+G Y++ + R + + LP D A L++ + Sbjct: 86 ALGGYAWAMYLMRQIGDRGVYGNAEMPDFMVFMNLKELPWFWLGFDNPLFAFLMVMFVPA 145 Query: 135 NILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSS 175 + + + D + + F S Sbjct: 146 FLAFIFGWFAFKSRVTGVYLSIITQALTYALMLAFFRNDMGFGGNNGLTDFKDILGFDLS 205 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + + L + ++ + + +IRD + L + KL F Sbjct: 206 ADTTRVGLLIITFIALALGYLLCRFIINSRLGRVVISIRDAESRVRFLGYRVEQYKLFIF 265 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 VS+ G+AGA + I+P +F +I ++ V +GG +L ++ Sbjct: 266 VVSAVLAGIAGALYVPQVGIINPGVFSPLFSIELVIWVAIGGRGTLYGAIIGAIVVSLAS 325 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 + + L + V+ + Sbjct: 326 SYFTSVLPEVWLYALGALFVIVTLYLPKGVVGI 358 >gi|90022616|ref|YP_528443.1| putative branched-chain amino acid transport system permease [Saccharophagus degradans 2-40] gi|89952216|gb|ABD82231.1| inner-membrane translocator [Saccharophagus degradans 2-40] Length = 307 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 91/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ A GL+I+ G +G++++ A+GAY+ + + L+ + Sbjct: 21 ISLFSVLLLMALGLAIIFGQMGVINMAHGEFMAVGAYTTYFISTLTEAYFPELMSYYFVF 80 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + +M F + + +L W + + Sbjct: 81 AILVAFVMAGALGYFAE--FILIRHLYKRPLDTLLATWGLSLIMQQAFRSIFGAREVSPA 138 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + + +VL ++ + L +++ R N+ + Sbjct: 139 LPDWLMGSYQPTDTIDIPLNGMFVLGLTTLVTLGVFYLLFKSSWGLRVRATTQNRVMSGA 198 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + FA+ G+AGA F + + +V+ GG SL Sbjct: 199 VGINTKKIDRYTFALGCGIAGIAGAAFTTIAS--TGPTTGSLYIVDTFMVVVFGGAGSLV 256 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + +AL L+++ + L Sbjct: 257 GTISSAFSIAQAQSILEFFISGSMAKVYTL-------------LALVLILMFKPEGLFAS 303 Query: 343 R 343 + Sbjct: 304 K 304 >gi|163733583|ref|ZP_02141026.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] gi|161393371|gb|EDQ17697.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] Length = 418 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 106/367 (28%), Gaps = 37/367 (10%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + +L L + +L F S ++ ++G + L + A + +V G G+LSL Sbjct: 23 FLGLLALFTLGVTILAEGFGVGVISTSFVKTLG-KTLCLCLVALAMDLVWGYCGILSLGH 81 Query: 71 VIAYAIGAYSYVILGSRYGLSIWL-------------------------------LIPVS 99 + + IG Y+ + I + P Sbjct: 82 MAFFGIGGYAIGMWLMYARTEIIVRESLANAPLPPTPQEVSDGIATQIFGVVGASEFPPI 141 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ + + + + L L + + A + Sbjct: 142 WAVAHSLPLQLAAVVVVPGLIALIFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSG 201 Query: 160 GTTVRSLIRFFRFPSSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L P + ++ ++ L + + + R IRD Sbjct: 202 LRGNNGLSGLQNLPGLSNVPQSTVSMWFFWASALALGLGYLLCAAVVSGKFGSVIRAIRD 261 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ L ++ KL F ++ +AGA + I+P +I + V + Sbjct: 262 DEARVRFLGYSVEAYKLFIFTFTAILAAIAGALYYPQAGIINPAEIAPIASIYLAVWVAI 321 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L A + + G N + + T L+ ++ V L Sbjct: 322 GGRGRLYGAVIGAAFVSLLSTWFTGGQAPDINLGF-YTIQWVNWWTILLGLSFVAVTLFA 380 Query: 336 SHSLLRL 342 + L Sbjct: 381 PRGIGGL 387 >gi|33866970|ref|NP_898529.1| putative membrane protein of ABC transport system [Synechococcus sp. WH 8102] gi|33639571|emb|CAE08955.1| Putative membrane protein of ABC transport system [Synechococcus sp. WH 8102] Length = 375 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 93/341 (27%), Gaps = 31/341 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + ++ + + ++ + L + A G+ ++ G GLLSL I +A+G Sbjct: 13 IVLWVLIIAAIVAAPAVLPVFRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQGIFFALG 72 Query: 78 AYSYVILGSR------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 Y+ + A + P +L A L Sbjct: 73 GYAAAMYLQLNSSGELPNGIPEFFSLYGVDQLPAFWLPFHSPLFTLVAIWLVPAVLAAVL 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTV-----------RSLIRFFRFPSSFVIYE 180 + K + + + F + Sbjct: 133 GNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTELFGQMVGSAEMQ 192 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 +++ + L+ + W+ R + IRD++ K FA++ Sbjct: 193 RSFFWLTAVVVILAWLFLRWVVRGRFGDVLIAIRDDEPRLRFAGYNPTLFKTIVFAIAGG 252 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+ GA + +SP +I ++ V +GG +L ++ L Sbjct: 253 LAGIGGALYTVQSGIVSPQYMTVPFSIEMVIWVAVGGRGTLVGAILGAVVINYAKSLVSE 312 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+ ++ Sbjct: 313 --------------ALPQSWLFIQGGLFILVVTALPEGVIG 339 >gi|78185815|ref|YP_378249.1| putative membrane protein of ABC transport system [Synechococcus sp. CC9902] gi|78170109|gb|ABB27206.1| putative membrane protein of ABC transport system [Synechococcus sp. CC9902] Length = 375 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 95/344 (27%), Gaps = 31/344 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L+ ++ + + + ++ + L + A G+ ++ G GLLSL I + Sbjct: 10 WLLVIFWVLIIAAIVAAPSVLPVFRLNLLGRFLALAIVALGIDLIWGFTGLLSLGQGIFF 69 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+G Y+ + L + + +A ++ + Sbjct: 70 ALGGYAAAMYLQLNSSEDLLNGIPEFFTLYGVDRLPAFWQPFHSPLFTLVAIWLIPGVLA 129 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTV-----------------RSLIRFFRFPSSFV 177 +L K + L + + F Sbjct: 130 ALLGNLVFRNRVKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSP 189 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++V M + + W+ R + IRD++ K FA+ Sbjct: 190 EMQRGFFWVTAVMVIFTWLFVRWVVRGRFGDVLIAIRDDEPRLRFAGYNPTLFKTLVFAI 249 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ GA + +SP +I ++ V +GG +L + L Sbjct: 250 AGGLAGIGGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLVGAILGAVAINYAKSL 309 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+ ++ Sbjct: 310 VSE--------------ALPQSWLFIQGGLFILVVTALPEGVIG 339 >gi|90421199|ref|ZP_01229100.1| permease protein, ABC-type branched-chain amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90334576|gb|EAS48359.1| permease protein, ABC-type branched-chain amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 382 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 96/347 (27%), Gaps = 36/347 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + L + + + + ++ + L Y A GL + GS G+LSL I + + Sbjct: 13 AIGFLLLAALLIVVIPAMTDAFRLNLVGKYLTYAFVAVGLVLCWGSAGILSLGQGIFFGL 72 Query: 77 GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 G Y + + L Sbjct: 73 GGYCMAMFLKLEASTPEATAIQSTPGIPDFMDWNQLTELPFFWEPFHSFGFTLLAVVLVP 132 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174 A L F + + +A L L + + Sbjct: 133 AILAFVIGFAMFTRRVGGVYFAIITQAIAAILTILIIGQQGYTGGVNGITDLRTLHGWDI 192 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + +Y+V + + + + +R + + +RD + + K Sbjct: 193 RTDDAKTILYFVNALLLLGAIGLSMLVRNSKLGRILVALRDKEDRVRFSGYDVAAFKTFV 252 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F ++A G+ GA F +SP +I ++ +GG SL T ++ Sbjct: 253 FCFAAALAGVGGAMFTLQVGFMSPTFVGIVPSIEMVIFCAVGGRLSLIGAVYGTLLVNWA 312 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F SF M +V+++ + L Sbjct: 313 KT--------------SFSESFPELWLFAMGALFIVVVMVFPNGLAG 345 >gi|84514516|ref|ZP_01001880.1| branched-chain amino acid ABC transporter, permease protein [Loktanella vestfoldensis SKA53] gi|84511567|gb|EAQ08020.1| branched-chain amino acid ABC transporter, permease protein [Loktanella vestfoldensis SKA53] Length = 391 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 102/367 (27%), Gaps = 36/367 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + L L V +L +GA + + L + A + +V G G+LSL Sbjct: 17 WFMGLLGLFTVIVTILSEGMGAGVMSTNMVKILGMTLCLCLIAIAMDVVWGYCGILSLGH 76 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVS------------------------------- 99 + +G Y+ + I + ++ Sbjct: 77 FAFFGLGGYAIGMWLMYARTEIVIRDNLAQGAIPATETEVAEAVASQIFGVVGSSDLPLI 136 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +G+ + L L L L + + A + Sbjct: 137 WTFAGSLPAQLALVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDTG 196 Query: 160 GTTVRSLIRFFRFPSSF----VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L P + + ++ ++ L + W+ + R IRD Sbjct: 197 LRGNNGLSGLQNIPGALDVPQAVISVWFFWASALALGLGYVLFAWVVSGKFGSVIRAIRD 256 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ L + KL F +++ G+AGA + I+P +I + V + Sbjct: 257 NEARVRFLGYNVEAYKLFVFTITAVVAGIAGALYYPQAGIINPAQIAPIASIYLAVWVAI 316 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L A + + G L + L+ + V L Sbjct: 317 GGRGRLYGAVIGAAFVSLLSSWLTG-GGAPNIELGPLRIIWTDWWLVLLGLGFVAVTLFF 375 Query: 336 SHSLLRL 342 + L Sbjct: 376 PKGIGGL 382 >gi|254452818|ref|ZP_05066255.1| ABC-type branched-chain amino acid transport system, permease protein II [Octadecabacter antarcticus 238] gi|198267224|gb|EDY91494.1| ABC-type branched-chain amino acid transport system, permease protein II [Octadecabacter antarcticus 238] Length = 307 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 119/309 (38%), Gaps = 29/309 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR----------- 87 + + ++ + L++ G+++ V +A GAY+Y I Sbjct: 7 VLATLTFGAVFSVLTLSLNLQYARGGMINFGTVAYFAAGAYAYAIFTQEPPSGLDQYWFG 66 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 + L ++ + + + S +I G P+L+ RG+YLA+ T +E+F ++L+ + I NG Sbjct: 67 FDLPWYIGLLAAGVASLLFALITGWPTLRLRGEYLALTTFAFAEVFHSVLLNERRIGNGS 126 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ +R + + + + ++A + L ++ Sbjct: 127 VGLANVERPDPTTL--------------GLNDTVGYALAAVILMLVTAYVFNRLLKSPFG 172 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 A + D++ A ++ +L F +S+ IG AGA +A ++P +F Sbjct: 173 RAIDAVHDDEIAAQAVGKDDARIRLQVFIISAVPIGFAGALYAMITTLVAPALFTAEVTF 232 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 V + LGG ++ L+ E+ + F + + + I Sbjct: 233 FVWIALALGGEKTIIGAILGAMALVLFQEIVGAIPFETVRA----AQIASSVEEIVTGIL 288 Query: 328 LFLVILMRS 336 +V+ +R Sbjct: 289 FIIVLRLRP 297 >gi|160937946|ref|ZP_02085304.1| hypothetical protein CLOBOL_02840 [Clostridium bolteae ATCC BAA-613] gi|158439172|gb|EDP16926.1| hypothetical protein CLOBOL_02840 [Clostridium bolteae ATCC BAA-613] Length = 293 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 93/305 (30%), Gaps = 26/305 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + Y + A G ++V G L L++ + + Y + + ++ IPV+ Sbjct: 11 LTGISLGGAYALIAIGYTLVYGILRLINFAHGDIFMMAGYFMIFAMASLP--WFIAIPVT 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +++ G+ + + + ++ +I + +L + + Sbjct: 69 LIVTILLGVTIERVAYRPLRSAPRMSVMISAIGVSYLLQNLATYLFTALPKGYPEIPFLK 128 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 F + + + L +IL + T I A R + + + Sbjct: 129 KI----------FRIGGLSASFVTFLTPVLTLVLVYLLILLINHTKIGMAMRAVSKDYET 178 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + I FAV S G+ + R + P + + GG+ Sbjct: 179 ASLMGIKINKTITFTFAVGSLLAGIGSILYFTDRMTVFPFS-GALPGLKCFVAAVFGGIG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ IL M F+ F I L +++L+R L Sbjct: 238 SIPGAVIGGFILGLGETALVAMGQSTFSDAFTF-------------ILLIVMLLIRPTGL 284 Query: 340 LRLRT 344 +T Sbjct: 285 FGEKT 289 >gi|260459955|ref|ZP_05808208.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259034166|gb|EEW35424.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 341 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 124/328 (37%), Gaps = 33/328 (10%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + + S ++ +G LI+ M L ++ G G++SL + I AY+ Sbjct: 24 IILGVALVLYPLVASDFFLTQIGGYSLIFGMLGLSLMLLAGYGGMVSLAQITVAGISAYA 83 Query: 81 YVILGSR------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 ILG+ G WL +P + + + ++G S++ G Y + TL ++ Sbjct: 84 IAILGNNNSSILGLGWPWWLAVPFAVLAAALASALIGWISVRTEGIYTIMITLAIATATY 143 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + I NG +G F G R YY+ LG+ LS Sbjct: 144 YFAQQNYAIFNGHSGYAGIRAPVFWGIGWRDAK--------------PFYYLCLGLAVLS 189 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + +L+ R+ + IRDN + +L + K+ A+A++ G+AG Sbjct: 190 YAAVLYGSRSTFGMTLQAIRDNPRRMRALGYHVTAHKVVAWALAGVIAGLAGVLLVWFNG 249 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 R+SP I V+ I ++GG+ +++ + D Sbjct: 250 RVSPGTIGVDAAIDVLIIAVIGGLRHPIGPFLGALVVVLMQT-------------FAIDI 296 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 R TL+ + +++ + +L L Sbjct: 297 VGAERFNTLIGLVFLVIVFVSPDGILGL 324 >gi|218887837|ref|YP_002437158.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758791|gb|ACL09690.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 301 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 90/289 (31%), Gaps = 3/289 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + IGAY L + +GLS ++ P Sbjct: 8 LTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGFTLFTAFGLSGFVSGPG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ M + S + + ++ + + Sbjct: 68 GVLLVLVMVMGLVALIGFLLERVAYRPLRSSSRL--SAVVSALGASIFFQNAVMLIYGAK 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + ++ L ++ + +RT I A R +Q Sbjct: 126 FQVYPNDIRPSYVLSIMGIDVPLVRIMMIAASLGLMLALYWFTQRTRIGAAIRATAIDQG 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + A G+AG ++ M + + + ILGG+ Sbjct: 186 AAKLMGIDVNRVISLVFMIGPALGGVAGVMVGLYYGQVDFTM-GWVYGLKAFTAAILGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ +L + L + + F + + Sbjct: 245 GNIPGAMVGGLLLGVIEALGAAYISIAWKDAIAFLVLILILIIRPTGLL 293 >gi|254489237|ref|ZP_05102441.1| ABC-type transporter, permease component [Roseobacter sp. GAI101] gi|214042245|gb|EEB82884.1| ABC-type transporter, permease component [Roseobacter sp. GAI101] Length = 431 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 114/336 (33%), Gaps = 23/336 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R+ L L + +++ +FL + ++ Q+ I ++FA ++++G G+L Sbjct: 15 RMRAGSMTLTLAPWLIAIVVLVFLPMVFTNNSALTIMNQMSITIVFALAYNMLLGQGGML 74 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S + +G ++ + + + + + + + G GM + + F Sbjct: 75 SFGHAVYAGVGGFACMHIMNMSDFFETIPLVILPIFGGLFGMGLAMIVGSFSTRSAGTVF 134 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 ++S ++ + + F + +I +YY+ Sbjct: 135 AMISLGVGELI--------AACSVIIVAFFGGEEGISGDRTYANPFFGIEFLQQIEVYYL 186 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + +SA+++ RT + +RDN + L + + + +F S F G+AG Sbjct: 187 TIAWLVISAALMYLWSRTPVGRMANAVRDNPERAEFLGYSSRWVRYYSFVASGFFCGIAG 246 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA + + ++ + + + +++ + LGG+ + + Sbjct: 247 GLFAINYEILTEENLNTTSSGVILLVTFLGGVGFFFGPIIGAIAFTLLQTVLS------- 299 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ L L Sbjct: 300 --------LSTELWAFYAGVLFVATVMFFPGGLAGL 327 >gi|260433660|ref|ZP_05787631.1| branched-chain amino acid ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417488|gb|EEX10747.1| branched-chain amino acid ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] Length = 280 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 106/260 (40%), Gaps = 12/260 (4%) Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 ++ G+ + P++ +++G G+ + +P+L+ G YLAI TL +S + ++++ +P Sbjct: 1 MIVIEAGVPFLVAFPLAGILTGIAGVTVAIPALRLHGIYLAIFTLALSILMDDLIVLAEP 60 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 IT G AG Y+ + F ++++L + L + L Sbjct: 61 ITGGVAGKYM------------GGVEIFGHLVDRWGTPEQFFWLVLAVTVLVTLGYINLL 108 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 RT + ++ +RD++ + ++ I K +FA+S A G AGA + + F Sbjct: 109 RTPLGRSFIAVRDSEVSAQAMGIDIARTKTVSFALSCAVTGWAGALMGLYAGAFNNESFS 168 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 +I ++ ++++GG+ S+ I+ + + + Sbjct: 169 VVISIQLLMMIVIGGLGSIHGAFLGAIIIGFLPQFLSIAKENVGALFGGSTVAIPGLEFG 228 Query: 323 LMVIALFLVILMRSHSLLRL 342 + + L IL + Sbjct: 229 IFGMILIGFILFEPMGIYGR 248 >gi|297563510|ref|YP_003682484.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847958|gb|ADH69978.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 363 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 112/295 (37%), Gaps = 17/295 (5%) Query: 46 ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIPVSAMISG 104 + ++ GL ++VG G +SL IGAY+ +L + + + + A S Sbjct: 66 VGYTMLAVAGLQLLVGGSGQVSLGHGAFMMIGAYTMALLVLYQPMLPLAVNLLLIAGASA 125 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 G+ +G + + G YLA ATLI++ + ++ + G G+ + Sbjct: 126 VAGIAVGAATARLHGPYLAGATLILAVGLPGLTHRYHELLGGSNGLNI------------ 173 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 V + V+ + +++ + + R IRD++ A Sbjct: 174 RTAGAPPLLQGLVTDSEWKALVVWTAVVIGLAVLATVSTGRLGRRMRAIRDDETAAAMAG 233 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + K+ AF ++SA G+AG A +P F + ++ +++ ++LGG+ SL Sbjct: 234 IPVGTTKVVAFVIASAAGGLAGGLQAYVLGTATPSTFTLALSLTLLAALVLGGIGSLWGA 293 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 A ++ + + S + N + L LV+ + Sbjct: 294 LWAAVAIVYLEVWVADLAGTLGLS----RDAENNLPIVFFGVVLILVLRFWPLGI 344 >gi|312199293|ref|YP_004019354.1| ABC transporter [Frankia sp. EuI1c] gi|311230629|gb|ADP83484.1| ABC transporter related protein [Frankia sp. EuI1c] Length = 957 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 101/270 (37%), Gaps = 12/270 (4%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 S RL + +L + + ++ + + +V G G Sbjct: 308 SGRLPRAGSGRLRPVTGLVWVLAAVAIPLFAAPSWSAAMTNSALFGLLGLSVVVVTGYAG 367 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +S+ C G+++ S L + + V + G++ G P+++ RG LAI Sbjct: 368 QISVACAALAGFGSFAAARASSDLHLPFLVCLIVGTAAAVLLGVVFGAPAVRVRGVNLAI 427 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL +S +N+++ +T G G+++ F S + Sbjct: 428 VTLGLSLAVENLVLSQPKMTGGLDGLHIHRP------------NLFGLDLSPSAHPDRFA 475 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 YV + L +L LRR +R N++ +L ++ KL AFA+S+ G+ Sbjct: 476 YVCIAAFVLCGLAVLNLRRGEAGRRLLAVRANERGAAALGVSVPGTKLGAFAISAGIAGL 535 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI 274 AGA A F +I V++ + Sbjct: 536 AGALSAFQFQLADFTDFGVFRSISVLAFTV 565 Score = 49.5 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 81/300 (27%), Gaps = 13/300 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ Y + A G+ V G+L+ +G+Y + G + Sbjct: 6 QFALIGLAGGGAYALVALGVVAVYRGSGVLNFAQGAIGMVGSYVFWD--LHAGSEGGAGL 63 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------- 148 SGA + P++ A+ L+ + +L + A Sbjct: 64 YGGTTSSGAVASLPVAPAMLIGVASGAVLGLLFYLLVVRLLRNVPDMAKVVATLGLMLLL 123 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 V R + L + + +L+ L+ + L RT + Sbjct: 124 QSAVVKRYGTESHLLPPLFGRGKIKILGGLVTYDTLAILVVTIGLAVGLSLMFSRTKLGM 183 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 +R+N A + + L + V A AG I Sbjct: 184 NATALRENPTAASGIGISPHPTGLITWGVGGAMAAFAGILLIPVIGL--TPDALTLLVIP 241 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 ++ ++G ++ L + + + + + L A+ Sbjct: 242 AMAAALVGRFNAVWTTVAIGLALGVAESVMRRYSI-NNGVISSVPFAVIIVTVVLGGAAM 300 >gi|163852794|ref|YP_001640837.1| urea ABC transporter, permease protein UrtB [Methylobacterium extorquens PA1] gi|163664399|gb|ABY31766.1| urea ABC transporter, permease protein UrtB [Methylobacterium extorquens PA1] Length = 308 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + + + + L + Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQAYLPSLFGAYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + L + +L W + +G Sbjct: 82 AMALAFLASGAMGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRTIFGPREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + S + + + +I +V+ ++ + + + R+ R + N+ + Sbjct: 140 LPSWMMGSIPVTDSIEVQINGLFVIAVTAVITVGVAVLMYRSRFGAQIRAVMSNRPMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + G+AG+ F + + IV+ GG SL Sbjct: 200 VGIDTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ ++++R L L Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VLTLLAVVGILMLRPQGLFTL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|118576408|ref|YP_876151.1| ABC-type branched-chain amino acid transport system, permease component [Cenarchaeum symbiosum A] gi|118194929|gb|ABK77847.1| ABC-type branched-chain amino acid transport system, permease component [Cenarchaeum symbiosum A] Length = 329 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 119/338 (35%), Gaps = 50/338 (14%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR---------- 87 +I + IY++ L++ G G+ + V+A A GA+ ++ Sbjct: 8 FISDLVAIFAIYLIINLSLNLEFGYGGVPNFGKVLAVAAGAFVVPMVTLSLLGAALSVDS 67 Query: 88 ---------------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + + G++ P+++ RGDYLAI Sbjct: 68 SGDNLAVVDEINRGLAAEPLLGVGVFAVAAIAAMAAGAGLGLVSAYPAVRLRGDYLAITL 127 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L EI + + I ++P+ G G+ V D L F+ +R V Sbjct: 128 LAFGEIIRIVGINYEPLVGGTLGVSVPDVLSFVPDDLR---------------FASASVV 172 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 L + + ++ R+ + R RD++ A SL ++ ++ + G Sbjct: 173 LAAVAGVVYLLVSRFTRSPVGRLLRATRDDEVALQSLGRDPAKVRIKVLMLAGMIGALGG 232 Query: 247 AFFAASRD-RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 +A+ + I+ + + + +VI+GG+ + + T I + + +L N + Sbjct: 233 MMYASYAEGVIAFGYNRLNWTFLPFVMVIVGGLANNKGVLLGTFIFVVIRKLVVYYNDNF 292 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + L+ + V+L R +L R Sbjct: 293 EGFV---PFDIIWLDYLLLGGLMLAVLLFRPKGILPER 327 >gi|328545452|ref|YP_004305561.1| branched-chain amino acid ABC transporter (permease protein); livM-like protein [polymorphum gilvum SL003B-26A1] gi|326415193|gb|ADZ72256.1| Putative branched-chain amino acid ABC transporter (Permease protein); livM-like protein [Polymorphum gilvum SL003B-26A1] Length = 324 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 112/306 (36%), Gaps = 29/306 (9%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 ++ I L + +I+ G G S + GAY+ +L ++GL+ WL + Sbjct: 27 LNIVIMTLYAALLGQAWNILGGYGGQFSFGHAAFFGTGAYTVAVLQVQFGLNPWLGLAAG 86 Query: 100 AMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ A +G + + RG Y A+ TL +E+ + IL P T GI + Sbjct: 87 GAVAVAVAAFIGFATFRYGLRGSYFALVTLAFAEVLR-ILANSVPFTGAGVGILIPLNQS 145 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 S ++++ M + + W+ + +RDN+ Sbjct: 146 ATNLQFASKT--------------GYFWLIWAMALAAFLVAWWIGHSRFGARLMAVRDNE 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVILG 276 A +L K+ A +S F G+AG F+A + P + + ++ + + I+G Sbjct: 192 DAARALGVDPFAVKMRAIMLSGLFSGLAGVFYAQYFLYLDPALAYGPAISVESLLVPIIG 251 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM +L A L + E+ + L L L++L Sbjct: 252 GMGTLFGPLLGAAALHLLSEVTRELIG-----------DLPGISLVLYGTILILMVLFVP 300 Query: 337 HSLLRL 342 L L Sbjct: 301 RGLAGL 306 >gi|256114356|ref|ZP_05455089.1| hypothetical protein Bmelb3E_16125 [Brucella melitensis bv. 3 str. Ether] gi|265995656|ref|ZP_06108213.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] gi|265999322|ref|ZP_05465807.2| high-affinity branched-chain amino acid transport system permease LIVH [Brucella melitensis bv. 2 str. 63/9] gi|262766940|gb|EEZ12558.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] gi|263093240|gb|EEZ17337.1| high-affinity branched-chain amino acid transport system permease LIVH [Brucella melitensis bv. 2 str. 63/9] gi|326409795|gb|ADZ66860.1| conserved hypothetical protein [Brucella melitensis M28] gi|326539511|gb|ADZ87726.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 302 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 8 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 68 LMLLLMMIVAMLLTGLWSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S V + V++ L + RT++ A Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 284 IVLIFMPSGILGR 296 >gi|298294087|ref|YP_003696026.1| urea ABC transporter permease UrtC [Starkeya novella DSM 506] gi|296930598|gb|ADH91407.1| urea ABC transporter, permease protein UrtC [Starkeya novella DSM 506] Length = 364 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 99/329 (30%), Gaps = 15/329 (4%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 + L +Y+ + Q+ + + A L ++ G LG+LSL + +AIG Y + Sbjct: 24 MPLLAGTPFGLSRYLTNAIGQLAAFAVLALSLDLIWGYLGILSLGHGLFFAIGGYVIAMY 83 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI------------ 132 ++ + +P G F L +A + I Sbjct: 84 LLKHSFEVTGTVPDFLQFMGWKEFPFYWAGFDFFPYALFVAIAVTGLIAGLFGYVSFRSR 143 Query: 133 ---FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 +I + ++ D + + F +P + L Sbjct: 144 VGGVYFAIITQALVYVAMLLMFRNDTGFGGNNGMTGFAVAFGWPMGTSGMITALSVASLL 203 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L + RD++ +L + KL + +S+ +AG + Sbjct: 204 VLAAVLLGCRLLVGSRFGALMLATRDDETRLRTLGYETLRLKLGVWCLSALIAMLAGMLY 263 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I+P + ++ + V +GG L ++ V + + Sbjct: 264 VPQVGIINPRVLSPELSLEIAVWVAIGGRGHLVGAVIGALLVNAVKFWLSFAAPEVWPFI 323 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L + +I L + L+R Sbjct: 324 LSGLIVLVVLVFPNGLIDLAKLRLVRPMG 352 >gi|226360134|ref|YP_002777912.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226238619|dbj|BAH48967.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 466 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 89/309 (28%), Gaps = 27/309 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 L+ + GLS++ G+ GL + +GA + ++ +G+ + ++ Sbjct: 180 IDGLRFGLVIAIAGVGLSLIYGTTGLTNFAHGELVTLGAVAAWVINVTFGVQLIPATVLA 239 Query: 100 AMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + G++ K + IA L++S L I D Sbjct: 240 VFVGILIGLLNNAAIWKPLRKRKTGLIAQLVVSIGLAISLRYLILIFFSDRAEPFVDYQA 299 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + + + + L L++T I A R + DN+ Sbjct: 300 QVERHW-----------GPIAITDANLVCIGISLVVLVGVALLLQKTRIGKAMRAVSDNR 348 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENIIVISIVILG 276 S + + + + G F S F +++ + + LG Sbjct: 349 DLAASSGIDVERVIRFVWGLGGGLAALGGVLFGISELGGRVQWEMGFKLLLLMFAGITLG 408 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ + I+ +V+L + + + R Sbjct: 409 GLGTAYGALLGCVIVGLLVQLSTLVINPDLKYIGGLLILIVILVV-------------RP 455 Query: 337 HSLLRLRTP 345 +L R Sbjct: 456 QGILGSRQR 464 >gi|171186032|ref|YP_001794951.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta] gi|170935244|gb|ACB40505.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta] Length = 363 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 103/340 (30%), Gaps = 34/340 (10%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM- 101 I IY ++ L++ G LGL V+ A+G + + ++ L I+ + Sbjct: 18 LIMFAIYGVYVLSLNLEAGYLGLPQFGKVMYLAMGGVAVGGIATKLALWIYGGAISAKAG 77 Query: 102 ------------------------------ISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + G ++ + L + + Sbjct: 78 ISPLKDLNTYCAAYQYQSIAVVNDIFKSSPLEGILFFLVAVALSALLAGVLGVVMAGPAL 137 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + + + + + V+ + V + F V L Sbjct: 138 RLREDYLGILFLVSAELVRVVSTYTPQVACGVFGAVVPDPFAWMGDYRPWGYLAVTLLFL 197 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + ++ L + A R IRD + A I+ + V+SA G+AGA F Sbjct: 198 VFTFFMLDRLVNSPFGRALRAIRDAETAARVFGKDIVKFRARVLGVASALGGVAGALFVF 257 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 ++ F + +++++GGM + A+ V + Y + Sbjct: 258 YNTFVNMGQFVPYYTFVAWAMLMVGGMGNNVGALVGVAVYYIVS---RSLEIYKDSLRAV 314 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + I + ++++ R L+ R R Sbjct: 315 INADPTFLQYIIFGIVIIVMVMFRPQGLVGERPSKTLSRR 354 >gi|307266490|ref|ZP_07548024.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1] gi|306918470|gb|EFN48710.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1] Length = 294 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GA++ + +S + Sbjct: 8 LINGISVGSIYALIALGYTMVYGIIKLINFAHGDVYMLGAFAGLYATLVLKMSFVPALIF 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G+I+ + + + I LI + +L G + Sbjct: 68 SMIVCAILGIIIERLAYRPLRNSPKIVILITAIGVSLLLEYTTMFFLGPQPRAFPEVF-- 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V ++ L + + T I A R + + + Sbjct: 126 -------KEVSYSLLGGKVTISNREILIIAVTVILMILLQYIVHNTKIGKAMRAVSYDMQ 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG +++ P M + +LGG+ Sbjct: 179 AARLMGINVDTTISITFALGSALAAAAGVLVGIYYNKVFPLM-GIMFGLKAFVSAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + IL L G + + F + L +++L++ Sbjct: 238 GIIPGAMTGGLILGITESLVSGYGSSLYRDPVAF-------------VILIIILLVKPSG 284 Query: 339 LLR 341 L Sbjct: 285 LFG 287 >gi|254562558|ref|YP_003069653.1| branched-chain amino acid ABC transporter permease [Methylobacterium extorquens DM4] gi|254269836|emb|CAX25814.1| putative branched-chain amino acid ABC transporter, permease protein [Methylobacterium extorquens DM4] Length = 308 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + + + + L + Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQTYLPSLFGAYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + L + +L W + +G Sbjct: 82 AMALAFLASGAMGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRTIFGPREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + S + + + +I +V+ ++ + + + R+ R + N+ + Sbjct: 140 LPSWMMGSIPVTDAIEVQINGLFVIAVTAVITVGVAVLMYRSRFGAQIRAVMSNRPMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + G+AG+ F + + IV+ GG SL Sbjct: 200 VGIDTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ ++++R L L Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VLTLLAVVGILMLRPQGLFTL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|254469631|ref|ZP_05083036.1| ABC transporter, permease/ATP-binding protein [Pseudovibrio sp. JE062] gi|211961466|gb|EEA96661.1| ABC transporter, permease/ATP-binding protein [Pseudovibrio sp. JE062] Length = 425 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 102/311 (32%), Gaps = 1/311 (0%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 +Y +L ++ L+ L + + + S+ I I ++FA ++++G G+LS Sbjct: 16 ARYKFATRVLPLLLLALILLSIPLFEPSRTWLSLFNAIGINMVFALSYNMLLGQAGMLSF 75 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + + +G Y+ + + + + +A A ++ + Sbjct: 76 GHAVYFGLGGYAAMHAMNAIENASYDGGVWAAFPMFALPLVGFAGGALAGAVIGWPSCRR 135 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 F I + + AG + + +Y+ + Sbjct: 136 AGVPFAMISLGIAELV-AAAGFMFISVFGGEEGITGDRMNGIELFGLSLGPLGEVYWFIA 194 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 FL +++ RT + + +RDN + + + F + F G+AG Sbjct: 195 FWTFLGTALMYAFTRTPLGKLAQAVRDNPERVQFVGYNPNRVRYLVFIAAGGFAGLAGGM 254 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A + + +P+ + +V+ + +GG + +L + + + Sbjct: 255 SAVNYEIFTPESLSVVPSGLVLLMAYIGGARYFAGPILGAVVLTYMQSNLSDYSEAWLLY 314 Query: 309 LLKFDCSFNMR 319 L + Sbjct: 315 LGLLFIGMILF 325 >gi|254391543|ref|ZP_05006743.1| branched-chain amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] gi|326440573|ref|ZP_08215307.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] gi|197705230|gb|EDY51042.1| branched-chain amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] Length = 310 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 105/305 (34%), Gaps = 7/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ + IG + + + + L + + Sbjct: 8 LANGLALGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTIYVWLPSGVSLAVAI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 MI G +G+ + R Y L + ++ + ++ Sbjct: 68 PLMIIGGAIAAVGVATAAERFAY---RPLRGAPRLAPLITAIGLSIALQQLVWGFYPDAK 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ + +VL+ ++ L++ ++ A + + Sbjct: 125 KHKSFPEFTGDAFRITDDLLIQRADAFVLILAPLCMLALGLFVSKSRSGRAMQATAQDPD 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + AFAV +AF +A + + +I+ +M F + + +LGG+ Sbjct: 185 TAKLMGINTDRIIVMAFAVGAAFAAVAAVAYGLDKGQINFEM-GFILGLKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L L +++ +++I + LV R Sbjct: 244 GNIYGAMVGGVVLGLAESLSIAYIEDIPGMSQLGGGAWSNVWAFVLLILVLLV---RPQG 300 Query: 339 LLRLR 343 LL R Sbjct: 301 LLGER 305 >gi|254250568|ref|ZP_04943887.1| Inner-membrane translocator [Burkholderia cenocepacia PC184] gi|124879702|gb|EAY67058.1| Inner-membrane translocator [Burkholderia cenocepacia PC184] Length = 295 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 59/308 (19%), Positives = 114/308 (37%), Gaps = 19/308 (6%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 ++ + +Y A GL++ G GL++ + +GAY+ I S+ G + Sbjct: 2 SSFVIHLLTVGCLYATMALGLNLQAGYAGLVNFGFIAFSGLGAYAAGI-ASQLGWPLPSA 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + ++ +GA +++ + DY IATL ++EI + I + +T G GI Sbjct: 61 LALALAAAGALAIVVARLGRQISADYWGIATLAIAEILRTIALNESWLTGGAQGIGGIAP 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L+ + + V G L+ + L + A + +R+ Sbjct: 121 LFPGLRAPWAD--------------LAFLAVTAGCLALTYATYRRLTASRFGRALKVMRE 166 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + K A + +AGA A + PD SE + ++V++ Sbjct: 167 EPALAVCFGYDPLALKTRASIAGALPAALAGALAAWYIGYVGPDAMIASETFALWTVVMV 226 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S + T I+ + + + + L L+ + L +L R Sbjct: 227 GGLGSHVGVLVGTLIV----QAVYALAPFLKDWLGVGSDLTGAVRLGLVGLMLLACVLWR 282 Query: 336 SHSLLRLR 343 H L+ R Sbjct: 283 PHGLVPER 290 >gi|311104568|ref|YP_003977421.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310759257|gb|ADP14706.1| inner-membrane translocator 19 [Achromobacter xylosoxidans A8] Length = 293 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 91/304 (29%), Gaps = 24/304 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP- 97 + +Y + A GLS+ G + +++ + Y L S +GL +P Sbjct: 9 LLGGIASGAVYGLIALGLSLQFGVMKIINFAHGAFLMMSMYVCFALTSHFGLHPLAAMPL 68 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + + + + + I AG Sbjct: 69 TALALFAVGYACQRWLIDGIYRKESSREPIGVLIFTTGLWIFLDNAFLALAG-------- 120 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 T+ + + +I+ L C ++A+++L+LR T A R ++ Sbjct: 121 PDSRTIDAPWANEVWMPGDLIFTYPQIAGLFFACLITAALVLFLRHTRTGRAIRATGQDR 180 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +A L +FA+ +G AGA F IV+LGG Sbjct: 181 EAASVLGIDSTRVYRLSFAIGLLVLGAAGALLLPLYPVNPFVGDIFGLR--AFVIVVLGG 238 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S++ ++ + + + + L+ + + R Sbjct: 239 IGSVAGAFWGGILVGVLESVGSQLIPITYAEA-------------LIFLLFLATMYFRPS 285 Query: 338 SLLR 341 L Sbjct: 286 GLFG 289 >gi|262274114|ref|ZP_06051926.1| urea ABC transporter permease protein UrtC [Grimontia hollisae CIP 101886] gi|262221924|gb|EEY73237.1| urea ABC transporter permease protein UrtC [Grimontia hollisae CIP 101886] Length = 360 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 100/346 (28%), Gaps = 33/346 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 V L+ + Y S+ + L + + A + +V G LG+LSL +A Sbjct: 21 IGFVVPILNLIVPAGSVFHLETYTVSLLGKYLCFAILALSVDLVWGYLGILSLGHGAFFA 80 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +G Y+ + R + LP F D A L+ + Sbjct: 81 LGGYAMGMYLMRQIGDRGVYGNPELPDFMVFLNWQELPWFWFGFDQFWFACLMAVAVPGL 140 Query: 136 ILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSF 176 + + + + + + + F Sbjct: 141 LAFVFGWLAFRSRVSGVYLSIMTQAMTFALMLAFFRNEMGFGGNNGLTDFKDILSFSLQS 200 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 I ++ + L+ + + + + IRD + + + +KL F Sbjct: 201 DATRIGLFVATVFALLLAYLLCRAVVVSRLGALTIAIRDAESRARFVGYRVENSKLWLFV 260 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 +S+A G+AGA + I+P F +I ++ V LGG +L ++ Sbjct: 261 LSAAIAGVAGALYVPQVGIINPGEFAPLNSIEIVVWVALGGRATLYGAVIGAVLVNYAKS 320 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F F + L L + L Sbjct: 321 W--------------FTVEFPEVWLFALGALFVLATLYLPKGVSGL 352 >gi|306829181|ref|ZP_07462371.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304428267|gb|EFM31357.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 289 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 105/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFLALII 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ + + + I+ LI + +L G Sbjct: 65 SMAGTALLGVVIEFLAYRPLRNSTRISVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I RF + +L L + L +++T + A R + + Sbjct: 115 -TRAFPQAIETIRFDFGPISLTNVQLMILAVSILLMVLLQLIVKKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|159028439|emb|CAO89882.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 316 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 104/319 (32%), Gaps = 31/319 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG------------- 85 + + +Y +FA G +++ LG+++ + +GAY L Sbjct: 10 VLNGLSIGSVYAIFALGYTLIFSILGIINFAHGAIFTLGAYFTYALTGGVFGFNGLLANA 69 Query: 86 -SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + L +L + + ++SG +++ + K + + L + ++ I Sbjct: 70 KLPFSLPFFLALFLGCILSGFTSVLLERLAFKPLRVRGSDSLLTLVSSLGAAVVIVNVIQ 129 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G F V + L + A + W+ T Sbjct: 130 YLFGAEIYTFPDDIYGN--LPPAINFGTADRPVAIRTIQIIIFLVSAVMVALLTYWVNFT 187 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + A + + ++ L + F +S A G+AG +S I+ F + Sbjct: 188 KMGKALQAVAEDVTTASLLGINPEKFIVITFFISGALAGLAGTLVGSSV-SIAGPYFGIA 246 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + + +++LGG+ S+ +L ++ + Sbjct: 247 FGLKGLGVIVLGGLGSIPGAVIGGLLLGIAEAFV--------------PAEYSGYREAIA 292 Query: 325 VIALFLVILMRSHSLLRLR 343 LF+++L+R LL + Sbjct: 293 FAILFIMLLVRPQGLLGRK 311 >gi|148559546|ref|YP_001259631.1| branched-chain amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|254700437|ref|ZP_05162265.1| branched-chain amino acid ABC transporter, permease protein [Brucella suis bv. 5 str. 513] gi|254708792|ref|ZP_05170603.1| branched-chain amino acid ABC transporter, permease protein [Brucella pinnipedialis B2/94] gi|254714634|ref|ZP_05176445.1| branched-chain amino acid ABC transporter, permease protein [Brucella ceti M644/93/1] gi|254717532|ref|ZP_05179343.1| branched-chain amino acid ABC transporter, permease protein [Brucella ceti M13/05/1] gi|256030318|ref|ZP_05443932.1| branched-chain amino acid ABC transporter, permease protein [Brucella pinnipedialis M292/94/1] gi|256160489|ref|ZP_05458178.1| branched-chain amino acid ABC transporter, permease protein [Brucella ceti M490/95/1] gi|256255695|ref|ZP_05461231.1| branched-chain amino acid ABC transporter, permease protein [Brucella ceti B1/94] gi|256370196|ref|YP_003107707.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|260167992|ref|ZP_05754803.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Brucella sp. F5/99] gi|261222906|ref|ZP_05937187.1| inner-membrane translocator [Brucella ceti B1/94] gi|261316286|ref|ZP_05955483.1| inner-membrane translocator [Brucella pinnipedialis B2/94] gi|261750938|ref|ZP_05994647.1| inner-membrane translocator [Brucella suis bv. 5 str. 513] gi|261757437|ref|ZP_06001146.1| high-affinity branched-chain amino acid transport system permease LIVH [Brucella sp. F5/99] gi|265987352|ref|ZP_06099909.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1] gi|265998865|ref|ZP_06111422.1| inner-membrane translocator [Brucella ceti M490/95/1] gi|306841503|ref|ZP_07474203.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO2] gi|148370803|gb|ABQ60782.1| branched-chain amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] gi|256000359|gb|ACU48758.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|260921490|gb|EEX88143.1| inner-membrane translocator [Brucella ceti B1/94] gi|261295509|gb|EEX99005.1| inner-membrane translocator [Brucella pinnipedialis B2/94] gi|261737421|gb|EEY25417.1| high-affinity branched-chain amino acid transport system permease LIVH [Brucella sp. F5/99] gi|261740691|gb|EEY28617.1| inner-membrane translocator [Brucella suis bv. 5 str. 513] gi|262553554|gb|EEZ09323.1| inner-membrane translocator [Brucella ceti M490/95/1] gi|264659549|gb|EEZ29810.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1] gi|306288467|gb|EFM59823.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO2] Length = 302 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 8 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 68 LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S V + V++ L + RT++ A Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 284 IVLIFMPSGILGR 296 >gi|85860150|ref|YP_462352.1| branched-chain amino acid transport system permease [Syntrophus aciditrophicus SB] gi|85723241|gb|ABC78184.1| branched-chain amino acid transport system permease protein [Syntrophus aciditrophicus SB] Length = 300 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 91/304 (29%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y IGA++ +I+ L+ + I V Sbjct: 8 LVGGLTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTALIVAGVLTLNGFSGISV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + LI ++ + + Sbjct: 68 LILAAVFAVVYASAYGFTVEKIAYKPLRQA---PRLSPLISAIGMSIFLQNYVLLAQTSD 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L +F I +++ + + L ++ T + A R ++ Sbjct: 125 FLPFPNLLPQFDFMAPYAHIMGSTELFIVATTALIMIFLTLLIKFTRMGKAMRATAQDRT 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + SA + G A+ RI+ F I + +LGG+ Sbjct: 185 MAMLTGVNVNRVISNTFILGSALAAIGGVLIASHIGRINFY-IGFIAGIKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L G + + F + + R Sbjct: 244 GSIPGAVLGGLVLGWTESFATGYVSSDYEDVFAFLLLVLVL-------------IFRPAG 290 Query: 339 LLRL 342 LL Sbjct: 291 LLGR 294 >gi|91978829|ref|YP_571488.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91685285|gb|ABE41587.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 290 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 96/306 (31%), Gaps = 26/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + ++ + A GL++V G LG+++L Y +GAY W+ Sbjct: 10 FLNAVQYGMVLFLVASGLTLVFGILGVINLAHGAFYMLGAYLAY----------WIAAYT 59 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G + L + + I L + +L+ + I + Sbjct: 60 GNFLIALVGGVAIAFVLGLALESVFIRWLYGRDHLAQVLLSFGLILVIDEVRQLLFGKDV 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +S + Y ++ + + ++A I + + RT I R +N++ Sbjct: 120 HSVAPPDWLSGSIQLTSNLSYPVYRLAICVFCLAVAALIFIVITRTKIGMIVRAGAENRE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L FA A + G A I+ +V+LGG+ Sbjct: 180 MTRVLGIDYDKVNRLVFATGIALAALGGIVTAP--ISTVYPGMGDGMLILSFVVVVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S++ A ++ L+ + + V+L R + Sbjct: 238 GSVAGAAIGALLIGLTDTFGKVFFPSVSG--------------MLIYLLMAAVLLWRPNG 283 Query: 339 LLRLRT 344 +L R Sbjct: 284 ILGRRD 289 >gi|325971927|ref|YP_004248118.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy] gi|324027165|gb|ADY13924.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp. Buddy] Length = 305 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 85/303 (28%), Gaps = 14/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L ++ +GAY + S L + Sbjct: 10 LMNGLTLGGIYALIALGYTMVYGILKFINFAHGDVLMVGAYVGLFFFDLLRGSSPLGLWT 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +I S +A + + + + + A Sbjct: 70 IVAF-FLAMLISMAFSALLGMFIERVAYKPLRKATRLAPLLSAIGVSFILSNGAAWMFGT 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V+ +L+ + + L++ +T + A R +Q Sbjct: 129 HSRKFNYPFDNTPVHLGDVVITPHQILILVVSLAMMIILKLFVDKTRMGKAMRATSLDQG 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + ++ FA+ SA + G A D + ++GG+ Sbjct: 189 TAMLMGISVNRVISMTFAIGSALAAVGGILIA--LDFKVYATMGTMTGLKAFVAAVVGGI 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++S +L + + T+ L +++L++ Sbjct: 247 GNISGAMFGGILLGLLETFGVAIFG-----------IPTGLKDTIAFGVLIIILLVKPEG 295 Query: 339 LLR 341 L Sbjct: 296 LFG 298 >gi|320530483|ref|ZP_08031541.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Selenomonas artemidis F0399] gi|320137316|gb|EFW29240.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Selenomonas artemidis F0399] Length = 290 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 87/303 (28%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G + L++ Y +GAY + + ++ Sbjct: 7 LINGVSLGSIYALIALGYTMIYGIIKLINFAHGDIYMVGAYLGFYAITLGIPVVPAILIS 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+ S + R + + + + + Sbjct: 67 MAVTSLLGIAVERFAYRPLRHAPRISVLITAIGVSFLLE------------YVMMALVSP 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + I + ++ ++ L + +R T I A R + + Sbjct: 115 TPRTFPATISDVSWTFEGLVISGQQLLIMGVTFVLMIILTYIVRATKIGKAMRAASYDTE 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + FA+ SA +AG + I P M I + GG+ Sbjct: 175 AAQLMGINADRIISITFAIGSALAAVAGVLIGIYYNSIDPLM-GLMPGIKAFVAAVFGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L +L V G F F F L LV+L+R Sbjct: 234 GILPGAVVGGIVLGIVEAFISGFGFSMFRDAAAF-------------AILILVLLLRPAG 280 Query: 339 LLR 341 + Sbjct: 281 IFG 283 >gi|254698225|ref|ZP_05160053.1| branched-chain amino acid ABC transporter, ATP-binding/permease protein [Brucella abortus bv. 2 str. 86/8/59] gi|260762671|ref|ZP_05875003.1| branched-chain amino acid ABC transporter, ATP-binding/permease [Brucella abortus bv. 2 str. 86/8/59] gi|260673092|gb|EEX59913.1| branched-chain amino acid ABC transporter, ATP-binding/permease [Brucella abortus bv. 2 str. 86/8/59] Length = 515 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91 KY + + I + L +V G G++SL + +GA+ + + Sbjct: 24 LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + + + + + G+ +GLP+L+ RG LAI TL + F +L Sbjct: 84 LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +L + A ++ ++ + + +W Sbjct: 134 ----------FPGQTSFTQVARPDLFANDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R +++A + +I AKLSAFA+S+ G++G A + + F +++ + + Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + G +++ EL +N + F Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291 >gi|84502213|ref|ZP_01000361.1| possible ABC transporter, permease protein precursor [Oceanicola batsensis HTCC2597] gi|84389573|gb|EAQ02292.1| possible ABC transporter, permease protein precursor [Oceanicola batsensis HTCC2597] Length = 327 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 128/321 (39%), Gaps = 22/321 (6%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + ++ KI+ ++ + + L + +++L + +FA ++++G GLLS Sbjct: 21 MPRHQKIIFVVLLAVLIALPFMVYPVF--------AMKVLCFALFACAFNLLLGFGGLLS 72 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + + +Y +GL+ L I + G+++G +++ +G Y A+ TL Sbjct: 73 FGHAAYFGMASYVCAHAAKVWGLTPELAILTGTATAAVLGLVIGSLAIRRQGIYFAMVTL 132 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +++ ++ + T G+ GI R F + ++ Y+ + Sbjct: 133 AFAQMVYFFALQAE-FTGGEDGIQSVPR-------------NDLFGLLPMKDDLTFYFFV 178 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + + I + + ++IR+N+ SL + KL F +S+ F G+AGA Sbjct: 179 LAITYGGILFIYRITHSPFGQVLKSIRENEPRAVSLGYHVNRYKLMVFVLSATFAGLAGA 238 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + S ++ + V+ + +LGGM ++ AI++ + + + Sbjct: 239 TKSQVFHLASLTDVHWTMSGEVVLMTLLGGMGTVLGPIVGAAIVVTMQNYLAYLGAWVTV 298 Query: 308 SLLKFDCSFNMRHTTLMVIAL 328 + ++ L Sbjct: 299 IQGCIFVIGVLLFREGIIGVL 319 >gi|331266745|ref|YP_004326375.1| ABC transporter membrane-spanning permease-high-affinity branched-chain amino acid transport [Streptococcus oralis Uo5] gi|326683417|emb|CBZ01035.1| ABC transporter membrane-spanning permease-high-affinity branched-chain amino acid transport [Streptococcus oralis Uo5] Length = 289 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 104/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + + +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMDFFLALII 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ + + IA LI + +L G Sbjct: 65 SMAGTALLGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I RF + +L FL + L +++T + A R + + Sbjct: 115 -TRAFPQAIETVRFDLGPISLTNVQLMILAVSIFLMVLLQLIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|170738934|ref|YP_001767589.1| urea ABC transporter permease protein UrtB [Methylobacterium sp. 4-46] gi|168193208|gb|ACA15155.1| urea ABC transporter, permease protein UrtB [Methylobacterium sp. 4-46] Length = 308 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 96/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + + + + L PVS + Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYMTYLCSNVFQSHLPSLFPVSFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + L + +L W + +G Sbjct: 82 AMGLAFLASGALGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + S + + + +I V+ ++ ++ L L R+ R + N+ + Sbjct: 140 LPSWMMGSVQATETIEIQINGMVVMGVTALITLAVALLLFRSGYGKRVRAVMQNRVMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + G+AGA F + + IV+ GG SL+ Sbjct: 200 VGIDTDKVDRLTFGLGCGIAGIAGAAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLA 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++ + +++MR L L Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSTAK-------------VLTLLGVVAILMMRPQGLFTL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|289581839|ref|YP_003480305.1| inner-membrane translocator [Natrialba magadii ATCC 43099] gi|289531392|gb|ADD05743.1| inner-membrane translocator [Natrialba magadii ATCC 43099] Length = 340 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 35/325 (10%), Positives = 92/325 (28%), Gaps = 16/325 (4%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 + + I + +Y + A GL++V G +G+L+ +GAY ++ Sbjct: 19 LFQPSTIARIIVEGLGKAAVYFVLAVGLTLVFGLMGVLNFTHGAMAMLGAYIGGLVMVLS 78 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN---------ILIK 139 + A+ ++ L + ++ I ++++ Sbjct: 79 VSDGTGALVRIALFMVVLAVVFALLTGFGSAFEYSLIRPIYDRTPMYQILLTFGVALILE 138 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + + + R+ + ++ + L Sbjct: 139 EVTRIVVLSQGIQPEPPWSGAMATAPAAFTERYDILGAPIRGLYAFEIVLGIVAVVGVWL 198 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 +L RT R ++ + +L + A F + + G+ G Sbjct: 199 FLNRTLYGLYIRAGSEDPEMVEALGIDVRQAFTIVFGLGTGLAGIGGVLLMWDPLWGPSA 258 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + +VI+GG+ S A ++ + + Sbjct: 259 LLAIDVLLYAFVVVIIGGLGSFKGTVAAAILVGIADSFTTWLFATGIVTFTGLPE----- 313 Query: 320 HTTLMVIALFLVILMRSHSLLRLRT 344 + L +++++R L + Sbjct: 314 --LTIFGLLVIMLIIRPQGLYGVEE 336 >gi|119384450|ref|YP_915506.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119374217|gb|ABL69810.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Paracoccus denitrificans PD1222] Length = 332 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 125/335 (37%), Gaps = 33/335 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LL V L L ++ + + +FA ++++G GLLS + Sbjct: 24 LLLVAIALAGLLVAPMFLYPIFLMKLLA----FALFASAFNLLLGYTGLLSFGHATFFGG 79 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 AY +G S I + + G++MG +++ +G Y A+ TL +S++F Sbjct: 80 AAYFTAHAVKVWGWSPEAGILLGVAGAAVLGLVMGAIAIRRQGIYFAMITLALSQMFFFF 139 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ ++S+ R F + + MYY +L + + Sbjct: 140 CLQ--------------APFTHGEDGIQSVPRGHLFGLIDLNRPMNMYYFVLAVFVIGLL 185 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 II + ++IR+N++ SL ++ KL AF +S+A G+AG A Sbjct: 186 IIRRFVNSPFGMILKSIRENEQRAISLGYSVQRYKLGAFVMSAALAGLAGGVKALIFQFA 245 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + VI + +LGG+ +L +++ + + Sbjct: 246 TLTDVTWQMSGEVILMTLLGGIGTLLGPIVGAGLVVTLQNYLATSDVPV----------- 294 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + + +L+ L+ + ++ Sbjct: 295 ----TIITGVVFMVCVLLFRRGLVGEFFATKIGKK 325 >gi|331694390|ref|YP_004330629.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326949079|gb|AEA22776.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 338 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 120/310 (38%), Gaps = 29/310 (9%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + + L Y GL ++VG L ++ + G Y+ V+L + GL + Sbjct: 24 FVVPENRVLLLNAFLAYGALVVGLDLLVGDLRMMPAGHAAFFGAGGYATVLLYQKAGLPL 83 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDY-LAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + ++ +I ++GLP++ + AI T E+ ++ G +G+ Sbjct: 84 PVAGAIAVLIVAVLATLIGLPAVGRSSGFSFAIITFAFGELLIQLIANVPGFFGGSSGLT 143 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + S+ R + L+ + + +++ +R + + + Sbjct: 144 IDWGVGSDMPFDFSVYR-------------YFTLWLVAVLVVVMLVVVLVRNSHLGLRMK 190 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R ++ L K AF ++S G+ G F+A ISPD +++I+++ Sbjct: 191 AVRADENGTRGLGFNPTTYKAVAFVLASTLAGLVGVFWAPMNGFISPDTLGVNQSILLLG 250 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 ++I+GG+ ++ A+L + + + T L+ L +V Sbjct: 251 MLIIGGVGRITGALVGVALLASLPAIVE---------------MDPVLRTVLVGALLAVV 295 Query: 332 ILMRSHSLLR 341 L++ ++ Sbjct: 296 ALLQPAGIVG 305 >gi|326315057|ref|YP_004232729.1| urea ABC transporter permease UrtB [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371893|gb|ADX44162.1| urea ABC transporter, permease protein UrtB [Acidovorax avenae subsp. avenae ATCC 19860] Length = 304 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 91/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+I+ G +G++++ IGAY+ + + +P + Sbjct: 18 LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLGSTLTAQYAPGFMPFYFPL 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + L + +L W + + T Sbjct: 78 AIAAAFGFAFVAGWLVEWGL--IRHLYKRPLDTLLATWGISLALQQCFRTFIGPKEVSPT 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + + +VL ++A +++ L ++ R N+ + Sbjct: 136 LPDWLMGSWAPAEGLDIPVNGLFVLALTVVVTAGVLIALHKSRWGLRVRATVSNRVMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + FA+ G+AGA A + + + +V GG SL Sbjct: 196 IGIDTKKTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + ++ + L++++R L Sbjct: 254 GTVVSAFGIAQTQSITEFFLAGSMAKVITLS-------------LIVLILMVRPQGLFAS 300 Query: 343 R 343 + Sbjct: 301 K 301 >gi|256061816|ref|ZP_05451951.1| branched-chain amino acid ABC transporter, permease protein [Brucella neotomae 5K33] gi|261325820|ref|ZP_05965017.1| inner-membrane translocator [Brucella neotomae 5K33] gi|261301800|gb|EEY05297.1| inner-membrane translocator [Brucella neotomae 5K33] Length = 302 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 8 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 68 LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S V + V++ L + RT++ A Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 284 IVLIFMPSGILGR 296 >gi|163856965|ref|YP_001631263.1| putative ABC transport protein, inner membrane component [Bordetella petrii DSM 12804] gi|163260693|emb|CAP42995.1| putative ABC transport protein, inner membrane component [Bordetella petrii] Length = 309 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 94/305 (30%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +GL++ IGA + ++ S + Sbjct: 8 LINGLTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATMIASAMVGGDPTVSAF 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +G ++ + +A + + + + Sbjct: 68 AVLGAGL--LVSVPLCMAVGWTAERMAYRPLRRAPRLAALITAIGVSIILQNLAMMVWGR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + + ++L + ++ + +T + A R N++ Sbjct: 126 NYLNFPQVLEPQVYELAGARMSSLQMAIVLIAALIMGGLLAVVHKTRLGTAMRATAQNRE 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I +AF + SA +AG ++ F + + +LGG+ Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAVAGMMVTTYYG-VAQYTMGFMLGLKAFTAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G L L+++ + R Sbjct: 245 GNLVGAMAGGLLLGIIESLGAGYIGDLTGGFLGSHYQDVFAFVVLVLVL-----IFRPSG 299 Query: 339 LLRLR 343 LL R Sbjct: 300 LLGER 304 >gi|84616856|emb|CAJ13750.1| Branched-chain amino acid ABC-type transport system, permease components [Desulfococcus multivorans] Length = 303 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 96/304 (31%), Gaps = 15/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ +A G Y VIL + +L Sbjct: 8 LINGLTLGGLYALIALGYTMVYGVIQLINFAHGELFAAGGYVGVILLGYFTGRGYLETHP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + GA + MG + G + + +L+ ++ + + + + Sbjct: 68 ILCLIGAFALTMGYCAFLAVGVEKVAYKPLRRQPRLAVLLSALGMSIFLSNALMLTQGVY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S + F V +L L + L + RT I A R ++ Sbjct: 128 DKAY-PSELFQGGFDLGGVTISYLRIMILAMTVVLLIGLNLLVFRTKIGIAMRATAQDKI 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ + FA+ + AG + F I + +LGG+ Sbjct: 187 MSSLVSISSNRIISLTFAIGAGLAAAAGVMVGLYYGSV-RYDMGFLPGIKAFAAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ I+ V G + + F I L V+ + Sbjct: 246 GNITGAMLGGLIIGMVEIFGAGYISGQYKDVFAF-------------IILIAVLYFKPTG 292 Query: 339 LLRL 342 ++ Sbjct: 293 IMGE 296 >gi|313903768|ref|ZP_07837157.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter subterraneus DSM 13965] gi|313465956|gb|EFR61481.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter subterraneus DSM 13965] Length = 292 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 97/304 (31%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + + + + + L + ++ + Sbjct: 8 LANALQLGGIYALIALGYTMVYGVLKLINFAHGDIFMVACFIGLFVAVYLKLPLAAVLVL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+ + + + + ++ +I + L T G A Sbjct: 68 TMAATALLGVTVERVAYRPLRNAPRMSLVITALGVGLFLENLVRATVGAA---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ + + ++ L A + + RT + A R I DN++ Sbjct: 118 -PRNFPALVPATTWNVGGITVSGVQVLIVAVSVLLMALLRYVVMRTMLGKAMRAIADNRE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ SA G A + I P M +LGG+ Sbjct: 177 VLGLMGINPDRIITATFAIGSALAAAGGILVAQAYPVIEPYM-GILIGWKAFIAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + +L L F + F L LV+L+R Sbjct: 236 GLIDGAMLGGFLLGLTEVLVAAYLPSTFRDGIAFT-------------ILILVLLVRPTG 282 Query: 339 LLRL 342 LL Sbjct: 283 LLGR 286 >gi|134096410|ref|YP_001101485.1| high-affinity branched-chain amino acid ABC transporter membrane protein [Herminiimonas arsenicoxydans] Length = 294 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 95/297 (31%), Gaps = 8/297 (2%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 +IY M A G ++ G L ++ + +GA++ + S L + + P +++ Sbjct: 1 MIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFA-GLTASTGVLMLDIGSPWIRLLAVVL 59 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 + L + L + +L T + + + SL Sbjct: 60 AAVCVTGLLGAAIAKWLVLPLHKAPPLNTLLATLMLGTVMREAVRLFYPDGSNSQPFPSL 119 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + +LL + A + + RT + A R + + + + Sbjct: 120 LPTDAIEFGGFALRADNVILLLSGLAIIAGVHFLITRTRLGMAIRAVAQDGETARLMGIN 179 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 L FA+ S +AG + I+ ++ +I + ILGG+ ++ Sbjct: 180 FEAVVLLTFALGSGMAALAGVMNGLYYNEINFNV-GLLLGVIGFAAAILGGLGNIYGAII 238 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + G+ L ++ + + +++ + L+ + Sbjct: 239 GGFLFAGLQVLGSATLPALIPNI------PSAYKDVFAFAVVIILMAWKPTGLIAEK 289 >gi|309790092|ref|ZP_07684665.1| inner-membrane translocator [Oscillochloris trichoides DG6] gi|308227817|gb|EFO81472.1| inner-membrane translocator [Oscillochloris trichoides DG6] Length = 389 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 105/350 (30%), Gaps = 24/350 (6%) Query: 12 DKILCLLAVVYPLLL------FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +L L+ VV L + + + ++ ++ A G ++V G L Sbjct: 39 AAVLGLIVVVVAFFLSRSDPKIMQTAIAILPQVMIDGMVRGFLFATIALGYTMVYGVLEF 98 Query: 66 LSLNCVIAYAIGAYSYV-----------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 ++ + +G + + + + I + I + +SG M + Sbjct: 99 INFAHGEIFMVGGFVGAGVAYLLMQWGLLSTLPWIVFIVIAIVMGMTVSGLLAMATERVA 158 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPIT--NGKAGIYVADRLYFLGTTVRSLIRFFRF 172 + + + LI + +L + + G G + Sbjct: 159 YRPLRNSPRLVPLISAIGMSLVLQDVVRLIATSSPLGFNARFETPNFGKPFQIASIPLGE 218 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + V ++ + ++ + T + A R + ++ + + Sbjct: 219 RAIPVQISPKAVIFIVAAMLMLLALNYLVNATRLGKAIRAVAQDRATASLMGINVNQIIS 278 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 F + A G AG F + ++P M F + + +LGG+ +++ +L Sbjct: 279 LTFLIGGALGGAAGVLFGMNIGTVNPYM-GFIPGLKAFTAAVLGGIGNITGAMVGGIVLG 337 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + S L L+++ R LL Sbjct: 338 FLEAFVASYLSLFTGG----AFSGASYADIAAFSILILILIFRPEGLLGE 383 >gi|84496247|ref|ZP_00995101.1| putative branched-chain amino acid transport permease [Janibacter sp. HTCC2649] gi|84383015|gb|EAP98896.1| putative branched-chain amino acid transport permease [Janibacter sp. HTCC2649] Length = 289 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 103/310 (33%), Gaps = 26/310 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y Y + A GL+++ G +G+++ + Y +GA +L + W + Sbjct: 6 QYTLQGLATGGFYALAALGLAVIFGVMGVVNFSHGAMYMLGAVGSAVLLDVADVPFWGAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++ G+++ +++ + +++ +++ G +G+ Sbjct: 66 VIIPILLFLFGILVERLLVRWLLGLDPLYNFLLTFGLTLLIVDLVKRRYGVSGLPYELPA 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 R + + + L ++ + L +T I R ++ Sbjct: 126 ----------GLEGRVSVGGLSLSSYQLFAAFFSVVLCVAVWMLLTKTRIGMIVRASTED 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L + F A G+AG A R + II+ ++V++G Sbjct: 176 AERTRALGINVGRWVTPVFGFGIALAGVAGVLAAPFRAI--TADMGSNFIIILFAVVVIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ A ++ V L+ + + V+L+R Sbjct: 234 GLGSILGAVVAGFLVGLVEAYGQAYA--------------PSYAQVLIFVLMAAVVLVRP 279 Query: 337 HSLLRLRTPS 346 L S Sbjct: 280 AGLFGREEAS 289 >gi|291279322|ref|YP_003496157.1| branched-chain amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754024|dbj|BAI80401.1| branched-chain amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 287 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 108/306 (35%), Gaps = 25/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I IQ IY + A GL++V G L +L + + +GAY V+L ++ S+ L + Sbjct: 7 ILQGLIQGSIYALIAVGLTLVYGLLRILHVAHAGLFTLGAYLGVLLMNQT-NSLILSFTI 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G G+ + + K + LI S + + + G G+ + + Sbjct: 66 SMFLVGLLGVAIYIFCYKPMLEKPPYVALIASIGLFISMEEIYRMVFGAMGVSYKNPPFQ 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S + + +L L +++ ++ +T + +WR + Sbjct: 126 DV-----------INLSSLHLKSAEIVTMLVALVLISALSIFTTKTRVGISWRATVTQPQ 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 S + + F + S G G + + P M ++I++LGG+ Sbjct: 175 IAESFGINVEKVRYGNFFIGSMLAGAGGVMVGILNNLVEPTMGGVPSY-KALAIIVLGGL 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ A+ +L V + + L +V++++ Sbjct: 234 GNVKGTLIASVLLGVVESFGTIYLGSLLD------------RDAIAFAFLIIVLMIKPQG 281 Query: 339 LLRLRT 344 L + Sbjct: 282 LFGSKR 287 >gi|145301111|ref|YP_001143952.1| ABC-type branched-chain amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142853883|gb|ABO92204.1| ABC-type branched-chain amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 308 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 86/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y ++ + + + Sbjct: 12 LLNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMVMAGLMMMGIDSTFL 71 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + +I+ I I + R Sbjct: 72 LLGGAFLVSIIITGTYGWTIERVAYRPLRGGNRLIPLISAIGMSIFLQNMMRMAQGSRDI 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + T + + + ++ ++ R+ + A R ++ Sbjct: 132 AMPTLISGGWTLGGEDGFQASLSYMQLIIFVVTFITMLALTQFIGRSRMGRACRACSEDI 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMANLLGIDTHVVISITFVLGATLAAVAGVLLGMYYGVINPY-LGFMAGLKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L V L G + ++ F + L V+L Sbjct: 251 IGSIPGAVLGGLLLGVVEALTAGYLSTEYKDVMAF-------------VLLIGVLLFMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|229514631|ref|ZP_04404092.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae TMA 21] gi|229348611|gb|EEO13569.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae TMA 21] Length = 333 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 31/312 (9%), Positives = 96/312 (30%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 35 LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + ++ + + + +P + + G I G+ K + + M+ Sbjct: 94 LCG-AFAATLVEMEVPVLVAVPTALLAGATLGAISGIIIAKGKVQAFIATLVTMT----- 147 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G +Y R G T + + + + ++ +++ Sbjct: 148 -------LLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWY 200 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + T + N+ A + K+ +A+ +AG + Sbjct: 201 LL----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 317 AKAVVILLAVLV 328 >gi|284990186|ref|YP_003408740.1| ABC transporter-like protein [Geodermatophilus obscurus DSM 43160] gi|284063431|gb|ADB74369.1| ABC transporter related protein [Geodermatophilus obscurus DSM 43160] Length = 610 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 98/269 (36%), Gaps = 33/269 (12%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS-----IW 93 + I + +FA+ V+ G LSL ++ A+S L + Sbjct: 5 YATTLTFIALGAIFAYSFYAVL-IAGQLSLGQAGFASVAAFSAATLAPSGDDVGDVPALL 63 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + + +++GLP++ RG +LAIATL +E + +L+ + T G G Sbjct: 64 TAVVIGMAVGAVASVVLGLPTMHLRGVFLAIATLGFAEAVRVVLLNQEW-TGGAQG---- 118 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + I + + A + R+ A I Sbjct: 119 ----------------------LAVPRILTVGMAWTALAVVAYWFWRMGRSRYGRALEAI 156 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+++ A S+ + +L+AF S A G+ G FA I+P F F+ + + Sbjct: 157 REDELAARSMGIDVGRHRLAAFVTSGAVAGLYGVLFAYYVRLIAPSDFDFTAAVDGLVTA 216 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMN 302 ++GG T + + E+ + Sbjct: 217 VVGGSTMFLGPILGSGFQTMIPEIQRAVG 245 >gi|225685894|ref|YP_002733866.1| inner-membrane translocator [Brucella melitensis ATCC 23457] gi|256261890|ref|ZP_05464422.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2 str. 63/9] gi|225641999|gb|ACO01912.1| inner-membrane translocator [Brucella melitensis ATCC 23457] gi|263091372|gb|EEZ15908.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2 str. 63/9] gi|326410212|gb|ADZ67276.1| inner-membrane translocator [Brucella melitensis M28] gi|326553505|gb|ADZ88144.1| inner-membrane translocator [Brucella melitensis M5-90] Length = 406 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 106/311 (34%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHVMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +YY+ L S ++ L T Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + L + + + L LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHLTSDVTRSW---------------LLYQGLILVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|192293244|ref|YP_001993849.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192286993|gb|ACF03374.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 341 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 109/337 (32%), Gaps = 17/337 (5%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSM-GIQILIYVMFAWGLSIVVGSL 63 L K D + LL + LL+ +G+ S + ++ + A GL++V G + Sbjct: 14 PLPQAKRDLLPVLLPAILALLMLPLVGSFSSWVTLTVASLAMGMMIFIMASGLTLVFGLM 73 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 +L+ A+GAY ++ +S + + + + S Sbjct: 74 DVLNFGHGAFIAVGAYVATLVLLPLAAMSGADSLLTNLAVLVPAVLAAMAVSGALGVVVE 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 + L + ++ A + F + + Sbjct: 134 RVLILPVYGQHLKQILMTTGGLIVAEQALYALWGPQIIPLPLPTSLRGSFIIGDIAIAKY 193 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 V+L + I L L RT I R +N++ +L + L F V SA Sbjct: 194 RLLVMLVGLVVFVGIQLTLNRTKIGLLIRAGVENREMVEALGYHVKRLFLGVFMVGSALA 253 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+ G +A R+++ +++ +VI+GG+ S+ ++ V + Sbjct: 254 GLGGVMWALYREQV-HASMGNELTVLIFIVVIIGGLGSVGGCFIGALLVAMVANYGGFL- 311 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ + +++ R L Sbjct: 312 -------------VPKLALVSNILLMVAILMWRPRGL 335 >gi|49083545|gb|AAT51058.1| PA1073 [synthetic construct] Length = 308 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIAFIAITLLAMMGLDSVPL 70 Query: 99 SAMIS-GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + A ++ I I + + Sbjct: 71 MMLAAFAASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + T + F + V+ + + + + L++ R+ + A R ++ Sbjct: 131 AIPTMLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A I+ F I + +LGG Sbjct: 191 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L + + ++ F L LV+L R Sbjct: 250 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 296 Query: 338 SLLRL 342 +L Sbjct: 297 GILGR 301 >gi|23013284|ref|ZP_00053197.1| COG4177: ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 329 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 115/315 (36%), Gaps = 19/315 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ S+ I +L+ ++++G G SL + +GAY+ L YG W+ Sbjct: 29 DYVLSILITVLLQAYLGMSWNVMMGFAGQFSLGHALYVGLGAYAGGALFVHYGTPPWIGA 88 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +S A G ++G +F+ + A L ++ ++ G + Sbjct: 89 FAGMAVSAAVGAVIGTLGFRFKVMGVYFALLTIAFAEFTRVLFDHWGWVGAS-------- 140 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + YYV+LGM + L I W+ IR++ Sbjct: 141 -SGLFLPPAPNNSPNNLWLLRGSTTMFYYVILGMTAAAFWFCRTLLMRRIGYYWQAIRED 199 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIVIL 275 Q A +L + K+ A +S+A + G F A + + P+ F +I ++ I+ Sbjct: 200 QDAADALGIDVFKNKMIAVLISAAMTSLGGMFLAFFNNNLYPESIFSMHRSIELMLGTII 259 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ +L +L + E ++L + I L L+++++ Sbjct: 260 GGIGTLFGPILGAVVLTALGEGL---------TILGAHIGIDGVKQIAYGICLMLILVLK 310 Query: 336 SHSLLRLRTPSNFLE 350 L + LE Sbjct: 311 PGGLWPWLRKALRLE 325 >gi|331015726|gb|EGH95782.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 307 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 93/297 (31%), Gaps = 16/297 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + Y + A G ++V G +G+++ Y IG+Y + + + Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +++ A G + + + + + LI + L ++ G Sbjct: 71 LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + L + F S V+ V + + L++ R+ + A Sbjct: 131 AIPNLL-------PGSLSFGLGGSQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F V +A +A + I+ F + Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAF 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ S+ +L + + ++ F + I Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299 >gi|313896873|ref|ZP_07830420.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Selenomonas sp. oral taxon 137 str. F0430] gi|312974320|gb|EFR39788.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Selenomonas sp. oral taxon 137 str. F0430] Length = 294 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 87/303 (28%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G + L++ Y +GAY + + ++ Sbjct: 11 LINGISLGSIYALIALGYTMIYGIIKLINFAHGDIYMVGAYLGFYAVTLGIPVVPAILIS 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+ S + R + + + + + Sbjct: 71 MAVTSLLGIAVERFAYRPLRHAPRISVLITAIGVSFLLE------------YVMMALVSP 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + I + ++ ++ L + +R T I A R + + Sbjct: 119 TPRTFPATISDVSWTFEGLVISGQQLLIMGVTFVLMVILTYIVRATKIGKAMRAASYDTE 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + FA+ SA +AG + I P M I + GG+ Sbjct: 179 AAQLMGINADRIISITFAIGSALAAVAGVLIGIYYNSIDPLM-GLMPGIKAFVAAVFGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L +L V G F F F L LV+L++ Sbjct: 238 GILPGAVVGGIVLGIVEAFISGFGFSMFRDAAAF-------------AILILVLLLKPAG 284 Query: 339 LLR 341 + Sbjct: 285 IFG 287 >gi|258541262|ref|YP_003186695.1| urea ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256632340|dbj|BAH98315.1| amide-urea transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256635397|dbj|BAI01366.1| amide-urea transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256638452|dbj|BAI04414.1| amide-urea transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256641506|dbj|BAI07461.1| amide-urea transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256644561|dbj|BAI10509.1| amide-urea transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256647616|dbj|BAI13557.1| amide-urea transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256650669|dbj|BAI16603.1| amide-urea transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653660|dbj|BAI19587.1| amide-urea transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 371 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 98/348 (28%), Gaps = 36/348 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + + L + + ++ + L Y GL G G+LSL I + + Sbjct: 10 ILFLSILAAILLIVLPMGLDAFRLNLIGKYLTYAFVTIGLVACWGDSGILSLGQGIFFGL 69 Query: 77 GAYSYVILG------------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 G Y + + S + Sbjct: 70 GGYCMAMFLKLQASTLEATKNQSTPGIPDFMDWNQITALPWFWKPFHSLSFSLIAMMVVP 129 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174 A L + + +A L L + + Sbjct: 130 AVLAVVIGAAMFKRRVGGTYFAIITQAIASVLTILIVGQQGYTGGVNGITDLRTLDGWDI 189 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + +YYV + + ++ ++R++ + R +RD + + K+ Sbjct: 190 RTDHAKYILYYVGVFLLLACLLLLRFVRKSKLGRILRAMRDQEDRVRFSGYNVANFKIFI 249 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 FA+++A G+ GA F +SP +I ++ +GG SL T ++ Sbjct: 250 FALAAAMAGIGGALFTLEVGFMSPTFVGIVPSIEMVIYCAVGGRNSLVGAVYGTLLVNWA 309 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F SF T M ++L L L Sbjct: 310 RT--------------SFSESFPEIWTFAMGGLFIAIVLFLPGGLASL 343 >gi|297579737|ref|ZP_06941664.1| ribose ABC transporter permease [Vibrio cholerae RC385] gi|297535383|gb|EFH74217.1| ribose ABC transporter permease [Vibrio cholerae RC385] Length = 333 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 32/312 (10%), Positives = 96/312 (30%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 35 LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + ++ + + + +P + + G I G+ K + + M+ Sbjct: 94 LCG-AFAATLVAMEVPVLIAVPTALLAGATLGAISGIIIAKGKVQAFIATLVTMT----- 147 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G +Y R G T S + + + ++ +++ Sbjct: 148 -------LLRGVTMVYTDGRPISTGFTDTSDTFAWFGTGYALGIPVPVWLMVVVFTGAWY 200 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + T + N+ A + K+ +A+ +AG + Sbjct: 201 LL----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 317 AKAVVILLAVLV 328 >gi|220923656|ref|YP_002498958.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219948263|gb|ACL58655.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 295 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 90/304 (29%), Gaps = 27/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IP 97 + + + ++ + + GL+++ G + +++ +G Y ++ + GL ++ I Sbjct: 8 LANGLMLGGLFAIVSVGLTLIFGIVKVVNFAHGEFLMVGMYGTYLVTTGLGLHPFVAVIA 67 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 V ++ + L + + LI + G Sbjct: 68 VVPVLFVLGALTQRLLIQPLMAAGDDHIQIFATVGLSTALINLALLAFGADIANTPPHGL 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L V + +L L + L L RT A R + N+ Sbjct: 128 RLP-----------IEIGPVRVLLGQVVILAASIALVLGLQLLLSRTQTGRAIRAVAQNR 176 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A + + F + +A +G+A A F +V+LGG Sbjct: 177 AAAELMGIDVKRIYALTFGIGAACVGVAAVLVAPLYPTSPNSGTYFVL--TAFVVVVLGG 234 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ ++ + + + + L++++R Sbjct: 235 LGSIGGAFAGALLIGLIDSIAGFYVG-------------SDMREIAVFGVFLLILILRPS 281 Query: 338 SLLR 341 L Sbjct: 282 GLFG 285 >gi|319791506|ref|YP_004153146.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315593969|gb|ADU35035.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 290 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 92/315 (29%), Gaps = 26/315 (8%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 + + +Y + A GL+++ G L +++ + + Y+ L + Sbjct: 1 MFDFGILFPSVLNGLTTGAVYALIALGLTLIYGVLHIINFAHGASLMLALYAVYFLKEKL 60 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 G+ +L +P+ + A G + + G L+ + ++ + Sbjct: 61 GIDPYLALPIVVLGMFALGYALQRVVINRSGHGKDENILLATLGIAIVMENLALLFFKSD 120 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 + + + + G +S + + RT + Sbjct: 121 -----------TRNIDTAYSLSTVAIGPAMIAVPKLVAFAGALVVSGILFWIMGRTDLGR 169 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 A R + ++ + + +F + A +G A F + ++ Sbjct: 170 AIRAVAKEKEGAKLMGIDVDHVYAMSFGIGLACLGAAACFLLPAYYV--NPQVGGGFVLV 227 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 +IV+LGGM S ++ V L + + Sbjct: 228 AFTIVVLGGMGSFVGALIGGFLVGIVESLGGLYLGESLGQIG-------------IFAIF 274 Query: 329 FLVILMRSHSLLRLR 343 V+L R + + Sbjct: 275 IGVVLFRPQGMFGAK 289 >gi|17986542|ref|NP_539176.1| high-affinity branched-chain amino acid transport system permease protein livH [Brucella melitensis bv. 1 str. 16M] gi|17982148|gb|AAL51440.1| high-affinity branched-chain amino acid transport system permease protein livh [Brucella melitensis bv. 1 str. 16M] Length = 307 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 101/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 13 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 72 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 73 LMLLLMMIVAMLLTGLWSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S + V++ L + RT++ A Sbjct: 133 KPVPQLLNGSYELF----------GSGGTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 182 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 289 IVLIFMPSGILGR 301 >gi|270292331|ref|ZP_06198542.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270278310|gb|EFA24156.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 292 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 104/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + + +L + + Sbjct: 8 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMDFFLALII 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ + + IA LI + +L G Sbjct: 68 SMAGTALLGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 118 -TRAFPQAIQTVRYDLGPISLTNVQLMILAVSLLLMILLQVIVQKTKMGKAMRAVSVDSD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|92117224|ref|YP_576953.1| inner-membrane translocator [Nitrobacter hamburgensis X14] gi|91800118|gb|ABE62493.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Nitrobacter hamburgensis X14] Length = 323 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 108/286 (37%), Gaps = 14/286 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ +L+ L +Q L + + A ++++G GLLS + Y Sbjct: 21 MIAFILMTALLAIVPMTGIYPFFVMQGLCFALLACAFNLLLGYGGLLSFGHAMFLGTSGY 80 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +GL L I + + ++ G+ +++ +G Y A+ TL ++++ I ++ Sbjct: 81 VSAHALKVWGLPPELGIVAGVVAAAVLSVVTGVVAIRRQGIYFAMITLALAQLLYFIYLQ 140 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ + + F + + +YYV+LG +I Sbjct: 141 --------------TPFTHGEDGIQGVPQGKMFGVLDLSHPDTLYYVVLGGFLFGFLVIY 186 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + ++IR+N++ SL KL A+ +S G AG+ S Sbjct: 187 RAINSPFGEVLKSIRENEQRAISLGYKTDQYKLLAYILSGTLAGFAGSLKVLVAQNASLT 246 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 ++ + ++ + ++GG+ ++ +I + + G + Sbjct: 247 DVHWTMSGEIVLMTLVGGLGTVFGPVVGAFAIIAMQQYLAGFGQWV 292 >gi|326316889|ref|YP_004234561.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373725|gb|ADX45994.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 306 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 92/305 (30%), Gaps = 15/305 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + L+ + A GL++V G + +++L Y +GAY + + G L + Sbjct: 11 LNGLQFGLMLFLLAAGLTLVFGIMDMINLAHGSLYMVGAYLIAAIATASGSFWIGLAGGT 70 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + ++ + L I + + + Sbjct: 71 LATAAIGVLLEVSVLRRLYRRDHLSQVLGTFAILLMANEAVRMVWGSQPVPLNPPPALAG 130 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + Y + +++ ++ + + + RT + R N++ Sbjct: 131 PVELLP----------GFSYPAYRLFIIGVGLAVALLLYVLVTRTRVGMQVRAGASNREM 180 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 ++ T + FA+ +A +AG S I+ ++++GG+ Sbjct: 181 AMAMGTNVRRLFTGIFALGAALCAIAGGMLGPLLAV--QVGMGESILILAFVVIVIGGIG 238 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---TLMVIALFLVILMRS 336 S+ ++ V + LL + L+ + + V+ + Sbjct: 239 SIRGALVGALLVGLVDTAGRTLVPLLAERLLGPAAAAGAGPAVASILIYVLMAAVLFWKP 298 Query: 337 HSLLR 341 L Sbjct: 299 RGLFP 303 >gi|225628839|ref|ZP_03786873.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid transport ATP-binding protein LIVG [Brucella ceti str. Cudo] gi|225616685|gb|EEH13733.1| high-affinity branched-chain amino acid transport system permease protein LIVH / high-affinity branched-chain amino acid transport ATP-binding protein LIVG [Brucella ceti str. Cudo] Length = 308 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 32 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 91 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L A + + +I + G + Sbjct: 92 LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 140 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + A R + ++ A + + Sbjct: 141 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 200 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 201 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 258 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + + + ++ L+++++ L Sbjct: 259 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 299 >gi|146283318|ref|YP_001173471.1| branched-chain amino acid transport protein BraD [Pseudomonas stutzeri A1501] gi|145571523|gb|ABP80629.1| branched-chain amino acid transport protein BraD [Pseudomonas stutzeri A1501] gi|327481711|gb|AEA85021.1| branched-chain amino acid transport protein BraD [Pseudomonas stutzeri DSM 4166] Length = 307 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 86/290 (29%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + +P+ Sbjct: 11 LINGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIAIVGLSMMGLDALPI 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + + MI+ + + I I + + Sbjct: 71 LMIGAFVTAMIVTSAYGYSIERVAYRPLRGSNRLIPLISAIGMSIFLQNVVLLAQDSKDK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + + + V+ + + + L++ R+ + A R ++ Sbjct: 131 AIPNLMPGNLVIGESTMNGVVISYMQILIFVVTFVAMYGLTLFISRSRLGRACRACAEDL 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A + I+P F I + +LGG Sbjct: 191 KMANLLGINTNGIIALTFVIGAALAAIAAVLISMQYGVINPH-IGFLAGIKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ +L + + ++ F + I Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFSLLVLVLLFRPTGIL 299 >gi|50955127|ref|YP_062415.1| ABC transporter, ATP-binding protein [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951609|gb|AAT89310.1| ABC transporter, ATP-binding protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 429 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 15/123 (12%) Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 K+ AFA+ + G++GA FA ++ F +I+ ++ V+LGG + Sbjct: 1 MPTFGYKVWAFAIGAGVGGLSGALFAGQVGFVNNQKFDVQTSILFLAAVVLGGAGNKVGA 60 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 AI+ + + Y + +AL L+++ RS L R Sbjct: 61 MLGGAIVAYIPLRFTAIADY---------------KYLIFGVALVLIMIFRSQGLFPARQ 105 Query: 345 PSN 347 Sbjct: 106 KLL 108 >gi|326385669|ref|ZP_08207299.1| urea ABC transporter, permease protein UrtC [Novosphingobium nitrogenifigens DSM 19370] gi|326209827|gb|EGD60614.1| urea ABC transporter, permease protein UrtC [Novosphingobium nitrogenifigens DSM 19370] Length = 333 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 99/333 (29%), Gaps = 28/333 (8%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L Y ++ + L + A G+ + G G+LSL + + +G Y+ + Sbjct: 2 LFALAAAIPFGLSDYDTNLVARFLAMGIVALGIVLTWGHGGILSLGQGVFFGLGGYAIAM 61 Query: 84 LGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + P + A + + + Sbjct: 62 HIKLADLAEGEIPDFMQWSGRTALPFWWEPFHSPVFALAAALVGPALVAALFAWAVFHRR 121 Query: 140 WKPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 I + + + F F + +Y++ LG Sbjct: 122 VSGTYFALITQALALAFATLIISRQDVTGGFNGLTNFTSIFGFLFAGPGMASALYWITLG 181 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 LS + WL + R RD + L + K++AFA+++ G+ GA F Sbjct: 182 ALALSWLGLRWLLGSRFGTVLRAARDGENRVRFLGYDPVPFKVAAFALAAMLSGLGGALF 241 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + ISP + + +I ++ V +GG TSL + + Sbjct: 242 TLNAGVISPALIGVAPSIEMVVWVAIGGRTSLGGAIFGALAVNLARDAISS--------- 292 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 SF +M LV+ + L L Sbjct: 293 -----SFPEGWLYVMGALFILVVTLFPQGLAGL 320 >gi|222479519|ref|YP_002565756.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] gi|222452421|gb|ACM56686.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] Length = 325 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 106/317 (33%), Gaps = 28/317 (8%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L T +Y + IY + A GL+++ G + +++ + Y+ ++ Sbjct: 32 LGLSLPSPTIFAQYFVFAVLLGGIYGLIALGLTMIFGVMDVINFAHGALMVVAMYAVLVF 91 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 GLS + IP + ++ G+++ ++ D LI++ ILI I Sbjct: 92 SDATGLSPFFAIPFAVLLLFVFGVVIYRSTIAPIIDAPQENQLIVTFGVLLILISGVEIA 151 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G + + S V Y L+ + L+L+RT Sbjct: 152 FGSDPRQL-------------GLDLGSLEISGVFVPQGQLYALIIALVALSGTWLFLQRT 198 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + A R DN+ + + F + +A G+AGA + Sbjct: 199 MLGRAIRGTADNRDGAQYVGIDVPRIDALTFGIGAALAGLAGAVIPLFQSF--TPALGDQ 256 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 I +V+LGG+ S I+ + + ++ Sbjct: 257 YLINAFVVVVLGGLGSFPGAFVGGLIIGFIQVFGSAYLG-------------GSTYQIVI 303 Query: 325 VIALFLVILMRSHSLLR 341 +A LV+L++ LL Sbjct: 304 FMAFILVLLVKPEGLLG 320 >gi|120611832|ref|YP_971510.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120590296|gb|ABM33736.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Acidovorax citrulli AAC00-1] Length = 306 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 92/305 (30%), Gaps = 15/305 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + L+ + A GL++V G + +++L Y +GAY + + G L + Sbjct: 11 LNGLQFGLMLFLLAAGLTLVFGIMDMINLAHGSLYMVGAYLIAAIATASGSFWIGLAGGT 70 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + ++ + L I + + + Sbjct: 71 LATAAIGVLLEVSVLRRLYRRDHLSQVLGTFAILLMANEAVRMVWGSQPVPLNPPPALAG 130 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + Y + +++ ++ + L + RT + R N++ Sbjct: 131 PVELLPGFH----------YPAYRLFIIGVGLAVALLLYLLVTRTRVGMQVRAGASNREM 180 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 ++ T + FA+ +A +AG S I+ ++++GG+ Sbjct: 181 AMAMGTNVRRLFTGIFALGAALCAIAGGMLGPLLAV--QVGMGESILILAFVVIVIGGIG 238 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---TLMVIALFLVILMRS 336 S+ ++ V + LL + L+ + + V+ + Sbjct: 239 SIRGALVGALLVGIVDTAGRTLVPLLAERLLGPAAAAGAGPAVASILIYVLMAAVLFWKP 298 Query: 337 HSLLR 341 L Sbjct: 299 RGLFP 303 >gi|239832870|ref|ZP_04681199.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239825137|gb|EEQ96705.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 307 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 13 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDVFMLGAFMALIVFLIITTFIGALPIA 72 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 73 LMLLLMMIVAMLLTGLWSWTIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L + V + V++ L + RT++ A Sbjct: 133 KPVPQLLNGSFNLFGTN----------VTISLKQIVVIVVTAVLLTIFWYIVNRTSLGRA 182 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 289 IVLIFMPSGILGR 301 >gi|239813802|ref|YP_002942712.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239800379|gb|ACS17446.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 290 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 92/307 (29%), Gaps = 26/307 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 I + +Y + A GL+++ G L +++ + Y+ L R+G+ ++ + Sbjct: 9 PSILNGLTTGAVYALIALGLTLIYGVLHIINFAHGACLMLALYAVYFLKERWGIDPYMAL 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ A G + + G L+ + ++ + Sbjct: 69 PIAVAGMFALGYALQRIVINRAGHGKDENILLATLGIAIVMENLALLFFKSDTRS----- 123 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + + G +S + + RT + A R + Sbjct: 124 ------IDTAYSLSTVAIGPAMIAVPKLVAFAGALVVSGILFWIMGRTDLGRAIRAVAKE 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + +F + A +G A F + ++ +IV+LG Sbjct: 178 KEGAKLMGIDVDHVYAMSFGIGLACLGAAACFLLPAYYV--NPQVGGGFVLVAFTIVVLG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM S ++ V L + + V+L R Sbjct: 236 GMGSFVGALIGGLLVGVVESLGGLYLGESLGQIG-------------IFAIFIGVVLFRP 282 Query: 337 HSLLRLR 343 + R Sbjct: 283 QGMFGAR 289 >gi|148558388|ref|YP_001257625.1| branched-chain amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|148369673|gb|ABQ62545.1| branched-chain amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 328 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 114/327 (34%), Gaps = 27/327 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + ++ + ++ +I+ + L +V G G+ +L + Sbjct: 16 AGLIGIVAIIAASVVGWFLFPDNLALLTRIIAIALLVLSLDLVTGYCGIATLGHAALFGA 75 Query: 77 GAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GAY I + + L+ + + G++ G L+ G + ++ + +F Sbjct: 76 GAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATGLAQLVLSIAVVHLFHE 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 K T G G+ G F +Y +Y + + +S Sbjct: 136 AANKASGWTGGSDGLSGISPDPIFGI------------FEFDLYGRTVYIYAVILLLISF 183 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + ++ + R ++++ ++ ++ A+L + +S A G+ GA A S Sbjct: 184 IFLRYVVCSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISGAVAGIGGALNAISTQV 243 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 + D F+ + + +++LGG SL T + + ++ N +++ Sbjct: 244 VGLDSLSFTMSAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVSTANPFHW--------- 294 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 T++ L V+L L Sbjct: 295 -----LTMVGALLIAVVLFAPRGLYGT 316 >gi|121608954|ref|YP_996761.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121553594|gb|ABM57743.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 306 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 109/309 (35%), Gaps = 15/309 (4%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + L+ + A GL++V G + +++L Y GAY S S W + Sbjct: 9 NLLNGLQFGLMLFLLAAGLTLVFGIMDVVNLAHGSLYMAGAYFAATFTS-LCGSFWAGLL 67 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 +S + A G+++ + + ++ L+ + I + + G + + Sbjct: 68 LSVAATAAVGVLLEMAVFRRLYQRSHLSQLLATFALILIFNELARMIWGAQALTLNTPPV 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 F Y F +++ ++A + L + +T + R ++ Sbjct: 128 FSRPVE---------LLPGFSYSSFRLFIIGTGLAVAALMYLIVVKTRLGMLVRAGASDR 178 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + ++ I FA +A +AG A + S I+ ++++GG Sbjct: 179 EMAITMGIDIARVFTLLFAFGAALCALAGTLLGAILEV--QVGMGESILILAFVVIVIGG 236 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILM 334 + S+ ++ V L + +++ + + + L+ + + V+ Sbjct: 237 VGSIRGALVGALLVGMVDTLSRSLLPAALRAIMAPEAAAGVGPSLASILIYVLMAAVLFF 296 Query: 335 RSHSLLRLR 343 + L R Sbjct: 297 KPRGLFPAR 305 >gi|190893151|ref|YP_001979693.1| amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190698430|gb|ACE92515.1| amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 300 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 93/304 (30%), Gaps = 17/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ + +G ++ +I+ L Sbjct: 8 LFNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++ ++ + + +A L S ++ I V Sbjct: 68 ILLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +++ L + TA+ A R ++K Sbjct: 128 KPI---PPMVSSVYQFGNISVSLKQIIIIVITAVLLTIFWYIVNHTALGRAQRATEQDRK 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + F + +A +AG + S F+ + + +LGG+ Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASF-ADGFTPGVKAFTAAVLGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL ++ + L + + F L V++ + Sbjct: 244 GSLPGAVLGGLMIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290 Query: 339 LLRL 342 +L Sbjct: 291 ILGR 294 >gi|148997174|ref|ZP_01824828.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|149007629|ref|ZP_01831246.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|149020391|ref|ZP_01835283.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|303260014|ref|ZP_07345988.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae SP-BS293] gi|303261420|ref|ZP_07347368.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae SP14-BS292] gi|303264087|ref|ZP_07350008.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae BS397] gi|303266300|ref|ZP_07352191.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae BS457] gi|303269541|ref|ZP_07355305.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae BS458] gi|307067353|ref|YP_003876319.1| branched-chain amino acid ABC transporter permease [Streptococcus pneumoniae AP200] gi|307127699|ref|YP_003879730.1| branched-chain amino acid ABC transporter permease [Streptococcus pneumoniae 670-6B] gi|147756874|gb|EDK63914.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|147760784|gb|EDK67755.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|147930693|gb|EDK81675.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|302637554|gb|EFL68041.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae SP14-BS292] gi|302638933|gb|EFL69394.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae SP-BS293] gi|302640926|gb|EFL71309.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae BS458] gi|302644230|gb|EFL74486.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae BS457] gi|302646492|gb|EFL76718.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae BS397] gi|306408890|gb|ADM84317.1| Branched-chain amino acid ABC-type transport system, permease component [Streptococcus pneumoniae AP200] gi|306484761|gb|ADM91630.1| branched-chain amino acid ABC transporter permease [Streptococcus pneumoniae 670-6B] gi|332077166|gb|EGI87628.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA17545] gi|332202614|gb|EGJ16683.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA41317] Length = 289 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 107/303 (35%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ G+++ + + IA LI + +L G Sbjct: 65 AMLVTAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|85715591|ref|ZP_01046571.1| Branched-chain amino acid ABC-type transport system permease component [Nitrobacter sp. Nb-311A] gi|85697530|gb|EAQ35407.1| Branched-chain amino acid ABC-type transport system permease component [Nitrobacter sp. Nb-311A] Length = 304 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 100/312 (32%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91 + + + IY + A G ++V G +G+++ + IG + +I Sbjct: 8 LINGVVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALITFLILVSMGLSAVPL 67 Query: 92 -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ VS ++ G ++ + + +A L+ + +L+ + ++ G Sbjct: 68 ILLVMLIVSMAVTAVYGWVVERIAYRPLRQSFRLAPLLSAIGMSFVLMNFSQVSQGAQVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + T S + + ++ + +L A + RT Sbjct: 128 PIPPLITGGYTLRDSGNFAVQLSNVQIVVMVTTIVLL-------AIFSYIVSRTRFGRDM 180 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +Q L + F + ++ +AG + + M F I Sbjct: 181 RACEQDQTMAALLGVNVDRTISMTFVIGASLAAVAGMMYLLYYGLVDFFM-GFVAGIKAF 239 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL + + + + F L + Sbjct: 240 TAAVLGGIGSLPGAMLGGLAIGLIETFWSAYFSIEYKDVAAFS-------------ILIV 286 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 287 VLIFMPTGLLGR 298 >gi|315186615|gb|EFU20374.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Spirochaeta thermophila DSM 6578] Length = 299 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 92/302 (30%), Gaps = 21/302 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + IY + A G +++ G + L++ +G + L + ++ Sbjct: 12 VNGIALGGIYALIAIGYTMIYGIIKLINFAHGDILMLGTFM-AYFVLMATGPTPLGLVLA 70 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +++ I+G+ +F L A I N LI ++ + Sbjct: 71 FLVAMPGSAILGMIIERFAYKPLRNAPRI------NALITAIGVSLFLENLARVLPFIGP 124 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 V +++ L + + RT + A R + ++ A Sbjct: 125 NPRQFPTPPSVFLSYGGVGISNIQLLIIVVSVVLMLVLSYIVERTKVGKAMRAVSYDKPA 184 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + FA+ SA AG FA++ I P M + +LGG+ Sbjct: 185 SALMGIDVNRVISFTFALGSALAAAAGILFASAYPLIEPYM-GIMPGLKAFVAAVLGGIG 243 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ I+ G + F L L++L++ L Sbjct: 244 SIPGAMVGGFIMGLAETYTKGFINSQLADAIAFG-------------ILILILLVKPSGL 290 Query: 340 LR 341 Sbjct: 291 FG 292 >gi|168334625|ref|ZP_02692774.1| ABC transporter (permease) [Epulopiscium sp. 'N.t. morphotype B'] Length = 300 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 88/309 (28%), Gaps = 17/309 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + I ++ + GLSI G + ++++ IGAY+ ++ + + Sbjct: 6 NTLFNGLSLTSIILLASLGLSITFGLMRVINMAHGEFIMIGAYATYVVQMVFAAVVPEQF 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + ++ + L I+ L EI + + + + Sbjct: 66 QSWYYVVAIPIAFLAAFAIGSLLEKLVISRLYGREIDSLLATFGVSLIL--QQLARSIFG 123 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F + +++ + + R+ R + N Sbjct: 124 AQGVNVKAPEFLFGGISIGGITLSYNRLFIIFSVVMCIVLTWYIMYRSGFGKQMRAVMQN 183 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + FA+ S G+AG + + + +V+LG Sbjct: 184 RGMAQCMGINSRRVDNLTFAIGSGIAGIAGCSISLLGSV--DSTVGQNYIVYAFMVVVLG 241 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +L AI+ +++ + + + R Sbjct: 242 GVGNLKGSVIGAAIIGFASIFAENYTSATMAKA-------------IVLFIVIIFLQKRP 288 Query: 337 HSLLRLRTP 345 L +R+ Sbjct: 289 QGLFVVRSR 297 >gi|319652360|ref|ZP_08006477.1| hypothetical protein HMPREF1013_03090 [Bacillus sp. 2_A_57_CT2] gi|317396021|gb|EFV76742.1| hypothetical protein HMPREF1013_03090 [Bacillus sp. 2_A_57_CT2] Length = 332 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 123/324 (37%), Gaps = 31/324 (9%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + LL L + + QI I+ +FA I++G G++S + + IGAYS Sbjct: 14 LAILLFLLLFPFVNDSRSTLILLAQIFIFAIFAMSFDILLGYTGIVSFGHCMFFGIGAYS 73 Query: 81 YVILGSRYG---LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 ++ ++ + + + + ++S I+GL SL+ + + A+ TL +S++F + Sbjct: 74 TALIFNKLDATLPNFLIGLVIGILLSALVSYIIGLLSLRLKSHFYAMLTLAVSQLFLVLA 133 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 KW+ +T G G + F T YY+ L + Sbjct: 134 EKWRGLTQGGDGFTFSVPDVFKDRT-------------------SFYYITLFSVAAVFIL 174 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + ++ + I N+ +L + KL A + +GA +A S I+ Sbjct: 175 LKLFTESSTGKVLKAISQNEYRAEALGYKTLHYKLIASVTAGVAASFSGALYAVSLRFIN 234 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 ++F + + + ++GG+ +L+ I+ + + Y Sbjct: 235 TNVFSIEVTLDALLMTMIGGLGTLAGAIAGAGIIEFLRHYLSELAMTY---------PIF 285 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 R T ++ +V+L L Sbjct: 286 ERWTIILGFLYIVVLLGFPSGLAG 309 >gi|289168247|ref|YP_003446516.1| ABC transporter membrane-spanning permease-branched chain amino acid transport [Streptococcus mitis B6] gi|307702039|ref|ZP_07639047.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus mitis NCTC 12261] gi|307705246|ref|ZP_07642113.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Streptococcus mitis SK597] gi|307706959|ref|ZP_07643758.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Streptococcus mitis SK321] gi|307708903|ref|ZP_07645363.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Streptococcus mitis SK564] gi|288907814|emb|CBJ22654.1| ABC transporter membrane-spanning permease-branched chain amino acid transport [Streptococcus mitis B6] gi|307616684|gb|EFN95873.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus mitis NCTC 12261] gi|307617673|gb|EFN96841.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Streptococcus mitis SK321] gi|307620239|gb|EFN99355.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Streptococcus mitis SK564] gi|307621195|gb|EFO00265.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Streptococcus mitis SK597] Length = 289 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 65 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ V +L L + + +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGPVSLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|308450153|ref|XP_003088198.1| hypothetical protein CRE_05354 [Caenorhabditis remanei] gi|308248841|gb|EFO92793.1| hypothetical protein CRE_05354 [Caenorhabditis remanei] Length = 356 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 103/344 (29%), Gaps = 27/344 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 ++ ++ + A Y ++ +I+ + A L +V G G+LSL + + Sbjct: 21 FAVMLILPWFHVLPQDSALHLSAYWVTLIGKIMCLALVALALDLVWGYAGILSLGHGLYF 80 Query: 75 AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 A+G Y++ + W +P + + + L L Sbjct: 81 ALGGYAFGMYLMRESAGEQLPDFMRFLSWTELPWYWVGTQHFLWALALVILVPGVIAFIF 140 Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + +I + + + + Sbjct: 141 GFFAFRSKIKGVYFSIITQAMTFAAALLFFRNETGFGGNNGFTGFKTILGMDITSASMRA 200 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + ++ + LS + L IRD++ L ++ KLSA+ +S+ Sbjct: 201 TLCFLTALVLLLSFIGLRSLMNKPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVI 260 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA + I+P +I + V GG +L ++ GV Sbjct: 261 AGIAGALYVPQAGIINPSEMNPVNSIEMAVWVAAGGRGTLIGPILGAGLINGVKTY---- 316 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 F ++ ++ +V + ++ L Sbjct: 317 ----------FTVAYPEIWLLILGALFIVVTIFLPKGVIGLLER 350 >gi|300313285|ref|YP_003777377.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076070|gb|ADJ65469.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 338 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 114/313 (36%), Gaps = 12/313 (3%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L L + A + QI+I +FA L +++G G++SL + +GAY Sbjct: 28 LLEILFWLLPVAAYFIFPDYLVLISQIMIVGLFAVSLDLILGYAGIVSLGHAAFFGLGAY 87 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +L + ++A+++ G ++ ++ + TL + + K Sbjct: 88 TAGLLAVHGWGEPITGLLLAAVVAAIAGFLVSFLVVRGADLTRLMVTLGIGLMLFEAANK 147 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 IT G G+ G F + Y + L I+ Sbjct: 148 AAFITGGVDGLSGMVMGKIFGV------------FEFDLNGRVAYGYSFAVLLLLFVILR 195 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + R IR+ + ++ + + F V++A G+AGA A + + D Sbjct: 196 RLVNSPFGLGLRGIREGGRRMPAIGADVNRRLVVIFTVAAAVAGVAGALLAQTTQFVGLD 255 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + F + ++ I++LGG L + + + G+N Y+ + + Sbjct: 256 VLGFPRSAELLIILVLGGTGRLYGGLVGALVYMLAQDYLSGLNPAYWQFWIGLLLIVIVL 315 Query: 320 HTTLMVIALFLVI 332 ++ V+ Sbjct: 316 FARGGLLGGLAVL 328 >gi|251781858|ref|YP_002996160.1| putative branched chain amino acid ABC transporter permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390487|dbj|BAH80946.1| putative branched chain amino acid ABC transporter, permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 289 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + L+ +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLYMMGAFIGYYLINALQLNFFLALIL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G L Sbjct: 65 TMVFTACLGVLIEFLAYRPLRQSTRIAALITAIGVSFLLEYGMVYFVGAEARAFPQALKV 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +LL L ++ +++T + A R + + Sbjct: 125 VKYH-----------LGPISVTNVQLIILLVSLTLMLALQFIVKQTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I+P M + + +LGG+ Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGLKAFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A I+ + + ++ + L +++L+R Sbjct: 233 GIIPGAAFGGFIIGLLET-------------FSTAIGLSSYRDAVVYVVLIMILLVRPAG 279 Query: 339 LLR 341 LLR Sbjct: 280 LLR 282 >gi|115351348|ref|YP_773187.1| inner-membrane translocator [Burkholderia ambifaria AMMD] gi|115281336|gb|ABI86853.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia ambifaria AMMD] Length = 408 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 101/298 (33%), Gaps = 12/298 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L V + Q V+ A ++ +G+ GLLS Sbjct: 7 AGALRWVLFAACVALPAWLWPHGAVLGYLTQTAALVVLALSYNLQLGTTGLLSFGHAAFA 66 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GA++ +R G + LL V + G I GL + + G A+ TL ++E Sbjct: 67 GLGAFAAAHWFNRVGGPLPLLPLVGGVAGAGFGFIAGLLATRRAGTVFAMITLGLAECVA 126 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 G G+ + + Y V+ C +S Sbjct: 127 AAAWSVPAWFGGLGGVPI------------DRASGTPWGGWQFGAPAQAYAVIAAWCIVS 174 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + L RT ++ +RDN +L T +L+ +S F G+AG + Sbjct: 175 ALAMRALTRTPLARLANAVRDNPARVAALGTEPRRVRLAMVTCASFFAGIAGTLTLIDVE 234 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 +PD + + V+ ++GG + A +L + + G++ + L Sbjct: 235 IATPDSLSMARSATVLIAAVIGGTGTFFGPAAGAVVLTALSVVVAGVSRAWALYLGVL 292 >gi|329911400|ref|ZP_08275504.1| High-affinity branched-chain amino acid transport system permease protein LivH [Oxalobacteraceae bacterium IMCC9480] gi|327545925|gb|EGF31025.1| High-affinity branched-chain amino acid transport system permease protein LivH [Oxalobacteraceae bacterium IMCC9480] Length = 309 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G ++V G L L++ IGA + V + L V Sbjct: 8 IINGLVLGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMAGVTILKIVQTVAPDLPGV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ G I ++ + +A L + ++ + + Sbjct: 68 VKILIAIGGAIPICVAVNLLIERVAYPRLRNAPRLAPLITAIGVSILLQTFAMMIWGRS- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I + + +L+ ++L + +T + A R +N + Sbjct: 127 -PVAFPQVISAESYHILGALISPTQVMLLVLAGISMFGLVLLVEKTKMGRAMRATAENPR 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ +A +AG + A+ M F + S +LGG+ Sbjct: 186 VAGLMGVDSNAVIVMTFAIGAALAAVAGVMWGATYASAQFAM-GFVPGLKAFSAAVLGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + L G L + + L +V+ +R Sbjct: 245 GNIYGAMLGGILLGLIESLGAGYIGDLTGGFLG-----SHYQDIFAFVVLIIVLTLRPSG 299 Query: 339 LLRLR 343 ++ R Sbjct: 300 IMGER 304 >gi|51892753|ref|YP_075444.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51856442|dbj|BAD40600.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 296 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 94/288 (32%), Gaps = 8/288 (2%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + +Y + A G ++V G + L++ + +GA+ + +GL + + VS Sbjct: 9 LNGLQLGFVYALIAVGYTMVYGIIKLINFAHGDVFMVGAFLAYFGFTSWGLPWPVAVLVS 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 G+ + + + A + L + Sbjct: 69 MAGCAVLGVGIERLAYRPLRARGAPRIAALITAIGVSLFIEYF-------TSLNFVFGSD 121 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 V ++ R+ + VL+ + L AS+ + RT + A R + + A Sbjct: 122 YRNVPRVLPDRRWELGGITVTNVQLLVLVTVLVLVASLQFVVYRTRVGKAMRAVAQDTDA 181 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + FA+ SA AGA FA + +I P M + + +LGG+ Sbjct: 182 ARLMGIDVDRIIACTFALGSALAAAAGALFAVAYPQIHPFM-GIMPGLKAFTAAVLGGIG 240 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ ++ V L F + F + + Sbjct: 241 SIPGALLGALVMGQVEVLTAAYVTTDFRDAIAFALLILVLLLRPTGLL 288 >gi|307719582|ref|YP_003875114.1| hypothetical protein STHERM_c19060 [Spirochaeta thermophila DSM 6192] gi|306533307|gb|ADN02841.1| hypothetical protein STHERM_c19060 [Spirochaeta thermophila DSM 6192] Length = 299 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 92/302 (30%), Gaps = 21/302 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + IY + A G +++ G + L++ +G + L + ++ Sbjct: 12 VNGIALGGIYALIAIGYTMIYGIIKLINFAHGDILMLGTFM-AYFVLMVTGPTPLGLVLA 70 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +++ I+G+ +F L A I N LI ++ + Sbjct: 71 FLVAMPGSAILGMIIERFAYKPLRNAPRI------NALITAIGVSLFLENLARVLPFIGP 124 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 V +++ L + + RT + A R + ++ A Sbjct: 125 NPRQFPTPPSVFLSYGGVGISNIQLLIIVVSVVLMLVLSYIVERTKVGKAMRAVSYDKPA 184 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + FA+ SA AG FA++ I P M + +LGG+ Sbjct: 185 SALMGIDVNRVISFTFALGSALAAAAGILFASAYPLIEPYM-GIMPGLKAFVAAVLGGIG 243 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ I+ G + F L L++L++ L Sbjct: 244 SIPGAMVGGFIMGLAETYTKGFINSQLADAIAFG-------------ILILILLVKPSGL 290 Query: 340 LR 341 Sbjct: 291 FG 292 >gi|148657085|ref|YP_001277290.1| inner-membrane translocator [Roseiflexus sp. RS-1] gi|148569195|gb|ABQ91340.1| inner-membrane translocator [Roseiflexus sp. RS-1] Length = 393 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 99/318 (31%), Gaps = 19/318 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-----------ILGSR 87 + ++ +Y A G ++V G L ++ + +GA+ + Sbjct: 75 MIDGLVRGFLYATIALGYTMVYGVLEFINFAHGEIFMVGAFVGAFFSAALASSGMLTTLS 134 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL---IKWKPIT 144 L + + + +SG M + + + + + LI + +L ++ + Sbjct: 135 PILFVIAAVLLGMAVSGVLAMSIERVAYRPLRNAPRLVPLISAIGVSLVLQDVMRMIAVN 194 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G V + + + V + ++ + + + T Sbjct: 195 TGLGFNAQFRTPDLGQPLVLAQMPIADERTIPVSIDSRSLIFIVVAILMLIGLNYLVNIT 254 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + A R + ++ A + + F + A G AG F I+P + F Sbjct: 255 KLGKAIRAVAQDRAAASLMGIDVNRVIAITFLIGGALGGAAGILFGMRVGTINPYV-GFL 313 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + + +LGG+ +++ +L + + S + Sbjct: 314 PGLKAFTAAVLGGIGNITGAMVGGIVLGFLEAFVASYLSLFTRG----QFSGASYADIVA 369 Query: 325 VIALFLVILMRSHSLLRL 342 L L+++ R LL Sbjct: 370 FSILILILIFRPSGLLGE 387 >gi|332297726|ref|YP_004439648.1| ABC-type transporter, integral membrane subunit [Treponema brennaborense DSM 12168] gi|332180829|gb|AEE16517.1| ABC-type transporter, integral membrane subunit [Treponema brennaborense DSM 12168] Length = 566 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 89/337 (26%), Gaps = 19/337 (5%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MS F L Y IL V L G S I ++ Q + +A G++ ++ Sbjct: 225 MSKFFLDNGLYLAILVFFIVCIVLAPLSGNGNLLSLPNIFTILEQSSTRMFYALGVAGLI 284 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGL---------SIWLLIPVSAMISGACGMIMG 111 G L+ A+GA ++ ++ IP++ + A + + Sbjct: 285 LLAG-TDLSVGRMVALGAVVTGLILHPGMNIVTFFNMGPWNFVAIPMAVRVLMALSISVV 343 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 L L + A L + + + G ++ + Sbjct: 344 LCVLFSSFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGTPVGSI-DAGIKDVFGGRW 402 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 I +++ +T + N +A ++ Sbjct: 403 IMGVLNGELITFPKLIIPAVIAIIVAWFIWNKTTFGKNMYAVGGNSEAASVSGISVFKVT 462 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIA 285 + F ++ F G F A + + I+ ++ GG+ + Sbjct: 463 MGVFIMAGIFYGFGAFFEAFKANA--SAGTGQGYELDAIAACVVGGISFNGGIGKIGGAV 520 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 I G+ + + Sbjct: 521 LGVIIFTGLTYCLTFLGIDTNLQFVFKGFIIIAAVAL 557 >gi|262198564|ref|YP_003269773.1| inner-membrane translocator [Haliangium ochraceum DSM 14365] gi|262081911|gb|ACY17880.1| inner-membrane translocator [Haliangium ochraceum DSM 14365] Length = 304 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 100/311 (32%), Gaps = 29/311 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90 + + IY + A G ++V G +G+++ + +GA+ +I S L Sbjct: 8 LINGITLGAIYGLIAIGYTLVYGIIGMINFAHGEIFMLGAFIGLISFLLLGLAGLSWAPL 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 ++ L + +S +++ A G + + + +A LI + L + + G Sbjct: 68 ALLLALLLSMVLTSAYGWAVERVAYRPLRGSHRLAPLISAIGMSIFLQNYVQVFQGARVR 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + I F V +++ L + L + RT A Sbjct: 128 PLPP-------VIEGSIELFEQGGFTVSLSYVQILIIVVTVTLMTAFALLISRTPFGRAQ 180 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +Q L + F +A +AG F I F I Sbjct: 181 RACEQDQTMAALLGIDVDRTVSLTFVSGAALAAVAGVMFLIYYGVIDFF-IGFLAGIKAF 239 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL ++ + + + F L L Sbjct: 240 TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFTIEYKDVAAFS-------------ILVL 286 Query: 331 VILMRSHSLLR 341 V+L R LL Sbjct: 287 VLLFRPTGLLG 297 >gi|301632824|ref|XP_002945480.1| PREDICTED: hypothetical protein LOC100493209 [Xenopus (Silurana) tropicalis] Length = 622 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 97/318 (30%), Gaps = 23/318 (7%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K LC + + L S + Q+++ + A G ++V+ + G + L+ Sbjct: 316 KTGTTLCWALAIACAVFGLSTDNFFSGSNFALILQQVMVVGVIAIGQTLVILTAG-IDLS 374 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 C +A A+G+ YGL L I + G++ GL + + Sbjct: 375 CGMAMALGSIVMTKFAVAYGLHPLLAIACGIGATALMGLVNGLLVTRIXLPPFIVTLGTY 434 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + F + T +F + + Y +L Sbjct: 435 NVAFAVTQLY-----------------SQSQTITDVPDAMTWLGGTFSLGGTPIAYGVLL 477 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 M L + WLR A + + +A L+ L + ++ F G+A Sbjct: 478 MLLLYLATWYWLRDNASGRHVYAVGNKPEATRLLSIASDRVLLGVYVLAGVFYGLAALLT 537 Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A + P+ + + ++V+ GG + ++ + M Sbjct: 538 VARTNVGDPNAGQTENLDAITAVVLGGTSLFGGRGMVLGSLAGAIVVGVLRNGLTLMGVS 597 Query: 305 YFNSLLKFDCSFNMRHTT 322 +L + T Sbjct: 598 SVYQVLITGILVILAVTV 615 >gi|161619713|ref|YP_001593600.1| hypothetical protein BCAN_A1829 [Brucella canis ATCC 23365] gi|260568864|ref|ZP_05839332.1| high-affinity branched-chain amino acid transport system permease LIVH [Brucella suis bv. 4 str. 40] gi|161336524|gb|ABX62829.1| Hypothetical protein BCAN_A1829 [Brucella canis ATCC 23365] gi|260154248|gb|EEW89330.1| high-affinity branched-chain amino acid transport system permease LIVH [Brucella suis bv. 4 str. 40] Length = 307 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 103/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---------GSRYG 89 + + IY + A G ++V G +G+++ + +GA+ +I+ Sbjct: 13 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFTGMLPVA 72 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 73 LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S V + V++ L + RT++ A Sbjct: 133 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 182 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 289 IVLIFMPSGILGR 301 >gi|239906902|ref|YP_002953643.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239796768|dbj|BAH75757.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 294 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 94/305 (30%), Gaps = 21/305 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + + +Y + A GL+++ G + +++ +G +S L G+ +L + + Sbjct: 9 LNGAMMGAMYGLTALGLTLIFGVMKVVNFAHGSLLMVGMFSAYWLIRLTGIHPYLALVIV 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + G + +K ++ +I Sbjct: 69 PPVLFVFGYYLQDVVIKPVFKAEGQVREPLT------VIIVTTGVWYVLDNLALMLFGAE 122 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 TVR+ I F I I + + + + L++R+T A R +++A Sbjct: 123 YRTVRTAISNKSFALGEFIISIPKFSGFVVAVATAVGLALFMRKTKTGKALRATSLDREA 182 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + AF + +A G+AG +I IV+LGG+ Sbjct: 183 ANLMGINQYRIYNIAFGLGTAIAGIAGCVLIPFYYV--YPSVGVVFDIRAFIIVVLGGLG 240 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ ++ + + + ++ +++ ++ Sbjct: 241 SIPGALLGGLVIGLIESVFSQFMASTWTEA-------------IIYAIFLIILFVKPSGF 287 Query: 340 LRLRT 344 + Sbjct: 288 FGHKQ 292 >gi|291303047|ref|YP_003514325.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728] gi|290572267|gb|ADD45232.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728] Length = 292 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 106/303 (34%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY +FA G ++V G L L+L Y GA + L GL +WL P+ Sbjct: 5 LANGLFSGAIYALFAIGFTLVFGILRHLNLAHAAIYTAGALIGIELVEGQGLPLWLAFPL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + A G+I+ + + LI + A Sbjct: 65 AILAGTALGLILERSAFRPLAGRRDEHFAG--------LISSVAFGGMLIALLQARFGSE 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +S + V + L L + L ++A+ A R + +N + Sbjct: 117 PRSFSQSAFPNEILTIAGVTVSLAQLLTLGLALALMLGLAWLLSKSALGRAMRAVAENPR 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L + +A+SSA AG A + + M S + +++ILGG+ Sbjct: 177 AARVLGINVEGVTAGTYALSSALGSCAGVLMALNVGQGDLRM-GLSIELTGFAVIILGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A +L + + +++ F + LF+++L R Sbjct: 236 GSLWGAMAAGLLLGFAEAFTVHLIDSTWKNVVAF-------------VLLFVILLTRPQG 282 Query: 339 LLR 341 L Sbjct: 283 LFG 285 >gi|241768068|ref|ZP_04765566.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241360637|gb|EER57630.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 304 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 122/308 (39%), Gaps = 33/308 (10%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + Y+ + + +L+ V+FA L ++G G+ S + GAY+ +L G+ + Sbjct: 21 GAWPYVPVLLVDLLVAVLFASSLHFLMGPAGMHSFGHAAYFGSGAYAAALLVQSAGMRME 80 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + ++ + +G ++ G ++ G YL + TL ++I + +W +T G GI Sbjct: 81 LALLLAPLAAGGAALVYGWFCVRLSGVYLTMLTLAFAQITWALCFQWDAVTGGSNGIAGV 140 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + + Y + L + ++ + A R + Sbjct: 141 WPAPW------------------LASQEAYYLLTLALVAAGVLLLRRVLLAPFGYALRAV 182 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 RD+ ++ + +AF VS F G+AGA S+ ISP+ +++ + +V Sbjct: 183 RDSAPRADAIGIDGRRLQWTAFVVSGVFAGLAGALHVFSKGSISPEGLSVGKSVDGLVMV 242 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ +L+ A + + Y+ ++ A+ ++L Sbjct: 243 LLGGVQTLAGPWVGAAAFTWLHDTVARNTDYWRA---------------VLGGAMLALVL 287 Query: 334 MRSHSLLR 341 M L Sbjct: 288 MFPQGLAG 295 >gi|317405793|gb|EFV86083.1| inner-membrane translocator [Achromobacter xylosoxidans C54] Length = 625 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 118/284 (41%), Gaps = 18/284 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + +ILI +FA L + G G+ S + +GAY +L L + + Sbjct: 344 PYAGILLTEILIAALFAASLHFLTGLAGMTSFGHAAWFGLGAYGAALLLKLMALPMEAAL 403 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + ++ G ++ G YLA+ TL +++I + +W +T G G+ Sbjct: 404 LLGPFAAALGALLFGWFCVRLSGVYLAMLTLAVAQILWALAYQWDEVTGGSNGL------ 457 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +PSS++ + YY+ L +C L + + L + + A R +RD+ Sbjct: 458 ------------IGLWPSSWLARGPWFYYLTLALCALGIAWLRRLAFSPLGYALRGVRDS 505 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +L + F +S G+AG+ +A S+ I+PD+ S ++ + +V+LG Sbjct: 506 GLRAEALGMDTRRIQWIGFVAASLAAGLAGSLYAFSKGSIAPDVLAVSRSVDGLVMVLLG 565 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 G+ +L+ A + + Y+ L + M Sbjct: 566 GLQTLAGPLVGAAAYTWLQDAAARSTEYWHAVLGLAILALVMLF 609 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 94/303 (31%), Gaps = 17/303 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLIPV 98 + + A GLS++ G +++ Y +G Y +G W + + Sbjct: 12 NGLADASALFLVAAGLSLIFGVTRVVNFAHGSFYMLGIYLAWTFTRHFGDGAGYWAGLLL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A+ +G G L LK L + L+ + I+ G ++ Sbjct: 72 AALATGLIGAAAELLVLKRLYRALELFQLLATFALVLIIGDATLAVWGPEDLFSPRAPGL 131 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G + + ++ + + L L RT R +N+ Sbjct: 132 SGA----------VDILGRRFPQYDLLLIAAGPVVLGLLWLLLMRTRWGRLLRAAAENRD 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L + SAF + + G+ GA A +V++GG+ Sbjct: 182 MLAALGVNQAWLFTSAFTLGAFLAGLGGALAAPRVPA--TLGLDLEIIASAFVVVVVGGL 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A ++ V + + + + + + +V++ R Sbjct: 240 GSIPGAFLAAILICCVKAVFVFLGQVQIG---PWLFNLSKLTLLAEFAVMAVVLVARPWG 296 Query: 339 LLR 341 LL Sbjct: 297 LLG 299 >gi|57903626|gb|AAW58113.1| putative branched-chain amino acid transporter [Burkholderia cepacia] Length = 638 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 121/318 (38%), Gaps = 29/318 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L+ L G + I+++ + A G ++ GLLS + AY I Sbjct: 314 LVALVAGIALPWLVYPVLACDIVLWGLCALGFDLLFSFGGLLSFGQAAWWGASAYLTGIF 373 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 ++ +W+ + IS + G+ + +G Y ++ T ++EI ++ + T Sbjct: 374 IAKLHYPMWIGLLAGVSISTLVALAFGMLITRKQGIYFSMVTFALAEIVYFVVNQSPAYT 433 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G+ G++ R + +I YYV L + L+ + + R+ Sbjct: 434 GGEDGLHGIMRGSLF--------------GVSLHNQITFYYVALVVVALTVGFVFRIIRS 479 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + RD+++ S+ + +L A+ +S+ I +AG FA + + +S + + Sbjct: 480 PFGLSLAGARDSERRMLSIGYDVRGLRLRAYVLSAFVISVAGGLFALAHEFVSLESVYWR 539 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + I + +LGG ++ +++ + + + ++ Sbjct: 540 ASGEPIMMTLLGGAGTVFGPMLGAGVVLVLRDHLSTVTDSGN---------------LVL 584 Query: 325 VIALFLVILMRSHSLLRL 342 + +++++ +L Sbjct: 585 GVTSVVIVMLFRRGILGE 602 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 103/303 (33%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + M + GLS++ G + +++ Y +GA+ +LGS+ GLS+W + + Sbjct: 9 LFNGLVNGGFIAMMSLGLSVIFGMMRVVNFAHGALYMLGAFIAFVLGSQLGLSLWAALVL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + GA G+++ L+ L+++ I+ G Sbjct: 69 APLAIGAFGLVLERLFLRHLYKVDPSYNLLLTFGLTLIIEDTMRRFFAVQGAPFLVPQSL 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G FV+Y + ++VL+ + L RT + R + Sbjct: 129 AGA----------VNLGFVVYPKYRFFVLVVSLVICGGTWFMLDRTRLGALVRAGTERPN 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + AFA S+ +AG + ++ ++V+ GG+ Sbjct: 179 LLRCFGVRVPLLVSGAFAFSAGLAALAGVLASPLKNI--SPFMGQEMIATTFAVVVAGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ + L + I + +V+++R Sbjct: 237 GSIVGSVVMGFLVGVISTLAAIWYPPVATAAT--------------YIVMIVVLIVRPGG 282 Query: 339 LLR 341 + R Sbjct: 283 IFR 285 >gi|296122554|ref|YP_003630332.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776] gi|296014894|gb|ADG68133.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776] Length = 321 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 87/306 (28%), Gaps = 17/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------------- 84 + + +Y + A G ++V G L ++ +GA+ Sbjct: 8 LMTALAIGSLYALIALGYTMVYGVLKFINFAHSDIVVLGAWLSYSFAIRALPLVGLDAHN 67 Query: 85 -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + + + I V+ + + + ++++ I ++L++ Sbjct: 68 PTTPPPIWMTAGIFVAVLALCSLAGFLIERLAYRPLRRAPRLNVLITAIGVSLLLQNVGQ 127 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 + G L + +V+ + + L ++ L + R Sbjct: 128 LDFVFGASPQKMPALLPNWELPIPFGQGESIRYVVLPLIDCIIFAVSGLLMLALELLIFR 187 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-- 261 T A R + N + + A F + SA G AG + ++ Sbjct: 188 TKFGTALRAVSFNTDFAALMGIPVDRAISLTFMLGSALAGAAGFLYVLKFPSMNQPAHSV 247 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + ++GG+ ++ I+ V + + + F + Sbjct: 248 WVLLGLKAFVAAVVGGIGNVRGAVLGGFIIAFVEQFGAYYISSNYRDVYVFSLLILILLI 307 Query: 322 TLMVIA 327 + Sbjct: 308 KPTGLL 313 >gi|289672630|ref|ZP_06493520.1| high-affinity branched-chain amino acid ABC transporter, permease protein BraE [Pseudomonas syringae pv. syringae FF5] Length = 148 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%) Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ + ++P Sbjct: 1 HRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNP 60 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 61 TSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------------- 106 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 107 -RVLLFGILMVLMMIWRPRGLIR 128 >gi|229184173|ref|ZP_04311382.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus BGSC 6E1] gi|228599288|gb|EEK56899.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus BGSC 6E1] Length = 298 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 60/313 (19%), Positives = 127/313 (40%), Gaps = 31/313 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98 M QI I+ +FA +++G G++S + + IGAY +L R + ++ I Sbjct: 1 MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFFIGIVA 60 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +IS I+GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 AIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPDVF 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 YYV L + ++ +++I + I N++ Sbjct: 121 RDRF-------------------TFYYVTLICLLIIFVLLRLFTKSSIGKVLKAISQNEQ 161 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L ++ K+ A V+ ++G F + ++ +F + + + ++GG+ Sbjct: 162 RVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L + + Y+ S L + R T ++ + +V+L+ Sbjct: 222 GTLI---------GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKG 272 Query: 339 LLRLRTPSNFLER 351 L+ ++R Sbjct: 273 LVGTVKSLKNMKR 285 >gi|225853237|ref|YP_002733470.1| hypothetical protein BMEA_A1841 [Brucella melitensis ATCC 23457] gi|225641602|gb|ACO01516.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] Length = 307 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 13 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 72 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 73 LMLLLMMIVAMLLTGLWSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S V + V++ L + RT++ A Sbjct: 133 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 182 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 289 IVLIFMPSGILGR 301 >gi|116250261|ref|YP_766099.1| sugar permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115254909|emb|CAK05983.1| putative sugar permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 395 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 94/314 (29%), Gaps = 19/314 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + G S + + QI I + ++V+ + G + L+ + Sbjct: 86 LIVLVLAIVIFGLTIGGRFFSSYTLTLILQQIAIVGILGAAQTLVILTAG-IDLSIGVIM 144 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 I A + YG+ + + ++ G CG++ G + Sbjct: 145 VISAVIMGNVAITYGIPTPIAVIAGLVVGGLCGLLNGFLVAYMKLPPFI----------- 193 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + I IY A+ F SF + + ++ M L Sbjct: 194 -VTLGTWNIVMATNFIYSANETIRDTDVDEKAPLLHLFAVSFKLGSAVLTLGVIAMVLLV 252 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L TA + D+ +A L+ +A+S G+A Sbjct: 253 LVLWYVLNHTAWGRHVYAVGDDPEAAKLSGIQTKKVLLTVYAISGVIAGLAAWVSIGRNG 312 Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308 ISP N+ I+ ++GG+ S+ I+ V + Sbjct: 313 SISPSSAVTDFNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 372 Query: 309 LLKFDCSFNMRHTT 322 +L Sbjct: 373 VLLTGVLIIAAVAI 386 >gi|42527867|ref|NP_972965.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Treponema denticola ATCC 35405] gi|41818695|gb|AAS12884.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Treponema denticola ATCC 35405] Length = 299 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 98/305 (32%), Gaps = 16/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + Y + G ++V G L L + Y + AY + ++ ++ + +P+ Sbjct: 6 LINGLVIGSTYALVTIGFNMVYGVLELTNFAHSSFYMLAAYIGQFILLKFFMT--VSVPI 63 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+ +I+ I + LI + + Sbjct: 64 ALIITFLTSIIITAFLGALMDKIALEPIRIKKGAPISSLISTVGVQTIINNSVLLIFGTV 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + + +L+ + + + RT + + R I NQ Sbjct: 124 PLYFPDLLKLGKFTIYGGTVVQWIQVLILIMTLIIMLVLTFIVTRTRLGKSMRAISQNQV 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I F + + G++G A R+ M S + + +LGGM Sbjct: 184 AARLMGININRVITLTFFIGTTVAGISGLMVAMYYQRVDTLM-GASVGLKSFAAAVLGGM 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A ++ + L + + + L LV+L+R Sbjct: 243 GSLPGAAIGGLLIGLLETLFAAYIS-------------SGYRDIVAFVILILVLLIRPSG 289 Query: 339 LLRLR 343 L+ + Sbjct: 290 LMGKK 294 >gi|254719779|ref|ZP_05181590.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. 83/13] gi|265984799|ref|ZP_06097534.1| inner-membrane translocator [Brucella sp. 83/13] gi|264663391|gb|EEZ33652.1| inner-membrane translocator [Brucella sp. 83/13] Length = 302 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 101/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 8 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 68 LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S V V++ L + RT++ A Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISFKQIVVIVVTAILLTIFWYVVNRTSLGRA 177 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 284 IVLIFMPSGILGR 296 >gi|256375807|ref|YP_003099467.1| urea ABC transporter permease [Actinosynnema mirum DSM 43827] gi|255920110|gb|ACU35621.1| urea ABC transporter, permease protein UrtC [Actinosynnema mirum DSM 43827] Length = 392 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/338 (13%), Positives = 98/338 (28%), Gaps = 28/338 (8%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 ++ L + + + + L + + A G+++ G G+L L + + +G Y+ + Sbjct: 20 VVLLAVAPLVLSPFRLGLLAKYLCFAIVAVGIAVAWGRGGMLVLGQGVFFGLGGYAMGMH 79 Query: 85 --------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 +W + + + + L + Q + Sbjct: 80 LLLAEAGAAGLPDFMVWSGVEELPALWAPFANPVFALAAVVVLPGAVAFCLGLLVFRQRV 139 Query: 137 LIKWKPITNGKAGIYVA------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + I + + + + FF + + +Y++ Sbjct: 140 RGAYFAILSQALAAAFVILLVGRQGVTGGTNGLTNFGSFFGLDLADPAGQRAVYWITAAA 199 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + W+ R +RD + L K F S+ G+AGA F Sbjct: 200 LVVVFLVARWVVRGPFGRLLVAVRDGEDRVRFLGYDPALVKTLVFTGSAVAAGIAGALFV 259 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 ISP + + ++ ++ V +GG SL+ + + Sbjct: 260 PVVGIISPALLGVAPSLELLVGVAVGGRFSLAGAVVGAIAVNYAKTV------------- 306 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 F F L LV++ L L Sbjct: 307 -FSEDFAEGWLYLQGGLFVLVLVFAPRGLAGLVERGRE 343 >gi|213584358|ref|ZP_03366184.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 208 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 9/208 (4%) Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGAY++ +L YGL W +P++ ++S A G ++G P L+ RGDYLAI TL EI + Sbjct: 1 IGAYTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRI 60 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYV 186 +L+ IT G GI + G + FF IF+Y V Sbjct: 61 LLLNNTEITGGPNGISQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLV 120 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 L + LS +I L R + AW +R+++ A SL + KL+AF +S+AF G AG Sbjct: 121 ALLLVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAG 180 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI 274 FAA + +SP+ F F+E+ V++IV+ Sbjct: 181 TLFAARQGFVSPESFTFAESAFVLAIVV 208 >gi|148989829|ref|ZP_01821123.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|147924771|gb|EDK75855.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] Length = 289 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 105/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 65 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALASAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|254234209|ref|ZP_04927532.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa C3719] gi|126166140|gb|EAZ51651.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa C3719] Length = 307 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 92/305 (30%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIAFIAITLLAMMGLDSVPL 70 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + + +I+ I I + + Sbjct: 71 MMLAAFSASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + T + F + V+ + + + + L++ R+ + A R ++ Sbjct: 131 AIPTLLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A I+ F I + +LGG Sbjct: 191 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L + + ++ F L LV+L R Sbjct: 250 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 296 Query: 338 SLLRL 342 +L Sbjct: 297 GILGR 301 >gi|15900645|ref|NP_345249.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|111658358|ref|ZP_01409046.1| hypothetical protein SpneT_02000498 [Streptococcus pneumoniae TIGR4] gi|148985900|ref|ZP_01818994.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|148992412|ref|ZP_01822107.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|168484846|ref|ZP_02709791.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae CDC1873-00] gi|168486757|ref|ZP_02711265.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae CDC1087-00] gi|168488418|ref|ZP_02712617.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae SP195] gi|168492899|ref|ZP_02717042.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae CDC3059-06] gi|169832785|ref|YP_001694212.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae Hungary19A-6] gi|221231546|ref|YP_002510698.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae ATCC 700669] gi|225854258|ref|YP_002735770.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae JJA] gi|14972224|gb|AAK74889.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|147922046|gb|EDK73170.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|147928729|gb|EDK79742.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|168995287|gb|ACA35899.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae Hungary19A-6] gi|172042002|gb|EDT50048.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae CDC1873-00] gi|183570263|gb|EDT90791.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae CDC1087-00] gi|183573120|gb|EDT93648.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae SP195] gi|183576901|gb|EDT97429.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae CDC3059-06] gi|220674006|emb|CAR68519.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae ATCC 700669] gi|225723977|gb|ACO19830.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae JJA] gi|301793909|emb|CBW36305.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae INV104] gi|301799767|emb|CBW32336.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae OXC141] gi|332073124|gb|EGI83603.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA17570] gi|332203904|gb|EGJ17971.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA47368] gi|332204759|gb|EGJ18824.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA47901] Length = 289 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 65 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|331087665|ref|ZP_08336592.1| hypothetical protein HMPREF1025_00175 [Lachnospiraceae bacterium 3_1_46FAA] gi|330410357|gb|EGG89790.1| hypothetical protein HMPREF1025_00175 [Lachnospiraceae bacterium 3_1_46FAA] Length = 551 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 28/318 (8%), Positives = 86/318 (27%), Gaps = 9/318 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y IL + V+ + + + + ++ Q + A G++ ++ G L+ Sbjct: 228 YIAILLIFIVLCIITPMIKGAPLLTYNNVLNVLQQASPKMFLALGVAGLILLAG-TDLSI 286 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G + I+ + + + + +I+ + L +++ Sbjct: 287 GRMVGMGMTTATIIMHQGINTG--GVFGHIFDFTSTPIIVRVILSLVICILLCTFFTMIA 344 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F I+ + + + + V P+ + +++ Sbjct: 345 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIEPTIPNMIIPKINGFPTIIIWA 404 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + +T + N +A ++ + AF ++ G Sbjct: 405 AAAVFIVWFIWNKTTFGKNLYAVGGNAEAASVSGISVFAVTVGAFILAGILYGFGSWLEC 464 Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304 + + I+ ++ GG+ +S + I + + Sbjct: 465 IRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTYSLTILGID 524 Query: 305 YFNSLLKFDCSFNMRHTT 322 + + Sbjct: 525 TNLQFVFSGIIILVAVAL 542 >gi|167770773|ref|ZP_02442826.1| hypothetical protein ANACOL_02119 [Anaerotruncus colihominis DSM 17241] gi|167667368|gb|EDS11498.1| hypothetical protein ANACOL_02119 [Anaerotruncus colihominis DSM 17241] Length = 293 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 93/304 (30%), Gaps = 26/304 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + Y + A G ++V G L L++ + + Y ++ + + + IP+ Sbjct: 11 LTGISLGGAYALIAIGYTMVYGILRLINFAHGDIFMMAGYF--MIFAMASIPWPIAIPLV 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + + G+++ + K ++ +I + +L + + Sbjct: 69 ILGTVVLGVVIERAAYKPLRTAPRMSIMISAIGVSYLLQNLATYLFTAIPKGYPEIPFLK 128 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 F + + + + L ++ + T + A R + + + Sbjct: 129 RI----------FKIGDLSASLVTFITPVLTIVLVLLLMALINHTKVGMAMRAVSKDFET 178 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + I F + SA + + R ++P + + GG+ Sbjct: 179 SRLMGIKINTIISITFVIGSALAAVGSILYFTDRMSVTPFS-GTLPGLKCFVAAVFGGIG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ ++ L M + F+ F + L +++L R L Sbjct: 238 SIPGAVVGGFVIGICETLLVAMGYSTFSDAFTF-------------LLLIVMLLFRPTGL 284 Query: 340 LRLR 343 + Sbjct: 285 FGEK 288 >gi|288959759|ref|YP_003450099.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] gi|288912067|dbj|BAI73555.1| branched-chain amino acid transport system permease protein [Azospirillum sp. B510] Length = 390 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 50/367 (13%), Positives = 105/367 (28%), Gaps = 39/367 (10%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPL------LLFLFLGATKSQKYIDSMGIQILIYVMFAW 54 + F + L++ I+ + + L + S+ + L + + A Sbjct: 3 LRFFLMGLDRKAGIVLTILAFLAVAVPVMTLAVPADSPFHLSVFTVSLLGKYLCFALLAL 62 Query: 55 GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 L +V G G+LSL +A+G Y+ + R + LP Sbjct: 63 ALDLVWGYCGILSLGHAAFFALGGYAMGMYLMRQIGPRGVYGNPVLPDFMVFLNWKELPW 122 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADR 155 D A +++ + + + + D Sbjct: 123 YWLGFDQFWFAAIMVLVVPGALAFAFGWFAFRSRVTGVYLSIITQALTFALLLAFFRNDM 182 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + + ++ + LS I + + + +RD Sbjct: 183 GFGGNNGLTDFKDILGYDIQADTTRVALFVATVVALALSYMIASGVIASKLGKVLVALRD 242 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + KL A+ +S+ G+AGA + I+P F + +I + V + Sbjct: 243 AESRVRFMGYDTESYKLFAWTLSACMAGVAGALYVPQVGIINPSEFAPASSIEAVIWVAV 302 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG +L+ ++ G + + V L Sbjct: 303 GGRGTLAGAILGAVLVNMGKSYFTG--------------ALPELWLFALGGLFVAVTLFL 348 Query: 336 SHSLLRL 342 LL L Sbjct: 349 PKGLLGL 355 >gi|316935918|ref|YP_004110900.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315603632|gb|ADU46167.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 341 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 109/337 (32%), Gaps = 17/337 (5%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYI-DSMGIQILIYVMFAWGLSIVVGSL 63 L + D + LL + L + +G+ S + + ++ + A GL++V G + Sbjct: 14 PLPQARRDLVPVLLPAILALAMLPLVGSFSSWVTLTIASLAMGMMIFIMASGLTLVFGLM 73 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 +L+ A+GAY ++ +S + + + + S Sbjct: 74 DVLNFGHGAFIAVGAYVATLVLLPLAAMSGADSLLTNLAVLVPAVLAAMAVSGALGVVVE 133 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182 + L + ++ A + F V + Sbjct: 134 RVLILPVYGQHLKQILMTTGGLIVAEQALYALWGPQIIPLPLPTALRGSFIIGDVAIAKY 193 Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242 V+L + I L L RT I R +N++ +L + L F V SA Sbjct: 194 RLLVMLVGLVVFVGIQLTLNRTKIGLLIRAGVENREMVEALGYHVKRLFLGVFMVGSALA 253 Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 G+ G +A R+++ +++ +VI+GG+ S+ ++ V + Sbjct: 254 GLGGVMWALYREQV-HASMGNELTVLIFIVVIIGGLGSVGGCFIGALLVAMVANYGGFL- 311 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ + +++ R L Sbjct: 312 -------------LPKLALVSNILLMVAILMWRPRGL 335 >gi|259507034|ref|ZP_05749934.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] gi|259165312|gb|EEW49866.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] Length = 377 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 96/323 (29%), Gaps = 30/323 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG------SRYG 89 + ++ +++ Y + A G+ I G G+L+L + + IGAY + Sbjct: 58 STFQLNLMARLVCYAIVAVGIGIAWGRGGMLTLGQGVFFGIGAYVMAMHMLLADAAMMGQ 117 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF----------QNILIK 139 + P + + A + + F ++ Sbjct: 118 TVPAFMSLAGTSDVPLWWRPFANPVVTVLAVIILPALVAFALGFPIFKRRIKGAYFAILN 177 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + + FF F + +Y + G+ L +I Sbjct: 178 QALAAAVVVLLVGQQGALGGSNGLNGFTSFFGFTLYDPTNRVVLYLMAAGVLLLMVAISY 237 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 WL R+ RD ++ L + K A+ +++ G+AGA F ISP Sbjct: 238 WLMRSRYGELLVATRDTEERVRFLGYDPAWIKTGAYVIAAMMAGIAGALFVPIMGIISPA 297 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 +I+ + V GG SL L + SF Sbjct: 298 EIGVVPSIVFVIAVAAGGRNSLFGPVVGALALGWMESAL--------------AQSFPSA 343 Query: 320 HTTLMVIALFLVILMRSHSLLRL 342 + L LVI++ + L Sbjct: 344 WSYFQGAILVLVIVLLPGGIASL 366 >gi|212711023|ref|ZP_03319151.1| hypothetical protein PROVALCAL_02092 [Providencia alcalifaciens DSM 30120] gi|212686191|gb|EEB45719.1| hypothetical protein PROVALCAL_02092 [Providencia alcalifaciens DSM 30120] Length = 308 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 87/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIP 97 + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 FLNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAGLMMLGIDVGWI 71 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + A A ++ I I + R Sbjct: 72 LVAAAFVAAIVVSSSYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + I + + ++ L++R + + A R ++ Sbjct: 132 ALPSLITGQWIIGESDGFSAIVTKMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL + + ++ F L V+L+ Sbjct: 251 IGSIPGAMLGGLILGVAEAMTSAYLSTEYKDVVSFG-------------LLIGVLLIMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|318604453|emb|CBY25951.1| urea ABC transporter, permease protein UrtC [Yersinia enterocolitica subsp. palearctica Y11] Length = 348 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 94/309 (30%), Gaps = 17/309 (5%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + L++ A GL+ + G G+LS + + Y+Y ++ +G + Sbjct: 38 DSAMIGDFSYFLLWTFCAIGLAAMWGHGGILSFGQTAFFGLAGYTYGVMTLNFGDGVLST 97 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 M + + + + + ++++ + Sbjct: 98 WSGLIMALLVAAAVAAALGYLMFYGSVTGIFIGIVTLSFTLVLETFMSQTAGPQWAIGSA 157 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 + + + + YY+++ + + L R+ + Sbjct: 158 RLNGFNGMSGMPPLSLPWFGGELLTLEGNSFYYLIILLLAGVYWAVRRLLRSNFGLTLAS 217 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR+N + L I +L F + G++GA + I+P + + + Sbjct: 218 IRENPRRAEMLGIDIRRYQLLVFVLGGVLSGLSGALYTLWGSYITPSSMGLTAAAMPVIW 277 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V G ++ TA+L+ + + + L+ L V+ Sbjct: 278 VATAGRKNIFGTVVITALLVWLSQWLAIYG--------------SEYAMILLGAILLFVV 323 Query: 333 LMRSHSLLR 341 L + LL Sbjct: 324 LAAPNGLLP 332 >gi|160895671|ref|YP_001561253.1| urea ABC transporter permease UrtC [Delftia acidovorans SPH-1] gi|160361255|gb|ABX32868.1| urea ABC transporter, permease protein UrtC [Delftia acidovorans SPH-1] Length = 396 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 100/331 (30%), Gaps = 36/331 (10%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + ++ + L Y A GL +V G G+LSL + + +G Y+ + Sbjct: 32 DIFRLNLVGKYLTYAFVAIGLVMVWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPIST 91 Query: 96 IPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S L L F+ ++A +I LI + G+ Sbjct: 92 KIQSTPGIPDFMDWNQLTELPSFWLPFKSLPFSLAAVIAVPTLLAWLISFAMFKRRVGGV 151 Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 Y A + L + + + + +YYV + + Sbjct: 152 YFAIITQAVALIVTVLIIGQQGYTGGVNGMTDLKTLWGWDTRTDSAKYILYYVCVALLIG 211 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + W++ + +RD + + K+ F +++A G+ GA F Sbjct: 212 AIVLCRWIQTGKVGTLLLAMRDKEDRVRFSGYDVANFKVFVFCLAAALSGIGGAMFTLQV 271 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 +SP +I ++ +GG SL T ++ F Sbjct: 272 GFMSPSFVGIVPSIEMVIYAAVGGRMSLVGAVYGTLLVNAGKTY--------------FS 317 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 SF LM V + L L Sbjct: 318 ESFPDLWLFLMAGLFIGVTMAFPMGLAGLWE 348 >gi|163845367|ref|YP_001623022.1| hypothetical protein BSUIS_B1267 [Brucella suis ATCC 23445] gi|225628348|ref|ZP_03786382.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261219367|ref|ZP_05933648.1| inner-membrane translocator [Brucella ceti M13/05/1] gi|261322429|ref|ZP_05961626.1| inner-membrane translocator [Brucella ceti M644/93/1] gi|294851031|ref|ZP_06791707.1| branched-chain amino acid transport system permease [Brucella sp. NVSL 07-0026] gi|306844772|ref|ZP_07477357.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO1] gi|163676090|gb|ABY40200.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|225616194|gb|EEH13242.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|260924456|gb|EEX91024.1| inner-membrane translocator [Brucella ceti M13/05/1] gi|261295119|gb|EEX98615.1| inner-membrane translocator [Brucella ceti M644/93/1] gi|294821674|gb|EFG38670.1| branched-chain amino acid transport system permease [Brucella sp. NVSL 07-0026] gi|306274944|gb|EFM56714.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO1] Length = 307 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 13 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 72 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 73 LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S V + V++ L + RT++ A Sbjct: 133 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 182 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 289 IVLIFMPSGILGR 301 >gi|323700059|ref|ZP_08111971.1| inner-membrane translocator [Desulfovibrio sp. ND132] gi|323459991|gb|EGB15856.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132] Length = 300 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 83/304 (27%), Gaps = 18/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ +A G Y VIL S Sbjct: 8 LINGITLGGVYALIALGYTMVYGIIQLINFAHGEFFAAGGYMGVILISYLSSQGLHPYAC 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+ L ++ + + Sbjct: 68 LAISLVLAMGYCALLAMAVEQLAYKPLRQASRLAALLSALGMSIF----LQNGLMLTQGV 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + I F + +++ L + + + +T I A R ++ Sbjct: 124 YDRPYPTEITSGGFEVGALSISYMQILIVVVTALLLVGLNILVFKTRIGRAMRATAQDKV 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FAV + AG ++ M F I + +LGG+ Sbjct: 184 MSALVGINSNRIIALTFAVGAGLAAAAGIMVGLYYGSVNYTM-GFVPGIKAFAAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ I+ V G + + F I L V+ + Sbjct: 243 GNITGALIGGLIIGMVEIFAAGYISGEYKDVFAF-------------IILIGVLYFKPTG 289 Query: 339 LLRL 342 ++ Sbjct: 290 IMGE 293 >gi|242309181|ref|ZP_04808336.1| abc transport system permease protein [Helicobacter pullorum MIT 98-5489] gi|239524222|gb|EEQ64088.1| abc transport system permease protein [Helicobacter pullorum MIT 98-5489] Length = 299 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 89/290 (30%), Gaps = 11/290 (3%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + +Y + A G ++V G L L++ +GA+ + GL + + Sbjct: 11 VNGLSLGSMYALIAIGYTMVYGCLRLINFAHADIIMVGAFLSFFAINSLGLPFYASAIFA 70 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ G+ + + I+ LI + L + G + + +F Sbjct: 71 VLVCAILGVGIDRVAYLPLRSSPRISMLITAIGVSFFLENLFNVFFGSTPRFFSAPEFFS 130 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 T F + V + L ++ +L RT A R + Sbjct: 131 HT----------FNLGSINLTYITIIVPIVTLLLLVVLLQFLYRTKQGMAIRATAFDINT 180 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + F + S G+ G F+A S I P M + + +LGG+ Sbjct: 181 VRLMGINVNNIIGLVFVIGSTLAGIGGIFYAISYPTIDPLM-GVLIGLKAFAAAVLGGIG 239 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 S+ IL + + F F + + + Sbjct: 240 SVGGAVLGGFILGFTEVMAVAIFPELGGYKDAFAFLFLILVLLFRPVGIM 289 >gi|220921218|ref|YP_002496519.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219945824|gb|ACL56216.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 306 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 93/309 (30%), Gaps = 15/309 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + ++ + A GL+++ G + L++L Y +GAY L + L+ Sbjct: 10 LNGVQLGILLFLVAAGLTLIFGVMDLINLAHGALYMVGAYLAATLTGLTDSFLLGLVLAL 69 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ L L + + + + Sbjct: 70 PATLLVGLVLEVLVIRHLYDRDHLDQVLATFGLILILNEGVRILWGAAPMSVPVPEALSG 129 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + Y ++ ++ + + L + RT + R + Sbjct: 130 SVHLVGTLH----------YPLYRLAIIAAGLAAALGLHLLVNRTRLGMRLRAGATHGAM 179 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L I + F + + G AGA A S I+ ++++GG+ Sbjct: 180 VAALGVDIRRLFMVVFGLGAMLAGFAGAMVAPILSV--DPGMGDSVLILTFVVIVIGGVG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336 S+ A+ I+ +L SL+ + T L+ I + V+ R Sbjct: 238 SVRGAFVASLIVGLADQLGRTFGPILLRSLMDASAASQTGRTLAPMLIYILMAAVLFFRP 297 Query: 337 HSLLRLRTP 345 L R Sbjct: 298 AGLFPARGR 306 >gi|116694036|ref|YP_728247.1| ABC transporter permease [Ralstonia eutropha H16] gi|113528535|emb|CAJ94882.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 304 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 87/298 (29%), Gaps = 17/298 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ A GL+I+ G +G++++ AIGAY+ + + +P + Sbjct: 18 LSLFSVLLLMALGLAIIFGQMGVINMAHGEFMAIGAYTIFLASTTVERLAPAWMPHYFPV 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + L + +L W + + T Sbjct: 78 AICAAFAIAFSAGWLAEWAL--IRHLYKRPLDTLLATWGLSLGMQQAFRSTFGPKEVSPT 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + I +V+ ++ + L L R+ R N+ + Sbjct: 136 LPDWLMGSWAPAPGLDIPINGLFVMALTLCVAGLVWLALYRSRWGLRVRATTANRAMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AGA A + + + +V GG SL+ Sbjct: 196 AGINTRRTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYLVDAFLVVTFGGAASLA 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + + +L + ++R L Sbjct: 254 GTVASAFGIAQTQSITEFFMTGSMARVLTLLLIVTIL-------------MIRPQGLF 298 >gi|90419081|ref|ZP_01226992.1| putative permease protein, branched-chain amino acid ABC-type transport system [Aurantimonas manganoxydans SI85-9A1] gi|90337161|gb|EAS50866.1| putative permease protein, branched-chain amino acid ABC-type transport system [Aurantimonas manganoxydans SI85-9A1] Length = 625 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 124/325 (38%), Gaps = 34/325 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + +V + L + + + +FA L +G G++S + + Sbjct: 314 VTILVVLAVAGFALLPLVESGFALILLTDFFVAALFAASLQFFMGLGGMISFGHAAFFGL 373 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY + + GL ++ + + G +++G ++ G YLA+ TL ++I + Sbjct: 374 GAYGAALAATALGLPMFAAMALGVATGGLGALVIGWFCVRLSGVYLAMLTLAGAQILWAV 433 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++W+ +T G GI +P F Y + LG+C + Sbjct: 434 ALQWQDVTGGDDGILGV------------------WPDRFAASRTVYYLIALGLCAVGLL 475 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 +I + R RD+ ++ + +L+AF ++ F +AG F ++ + Sbjct: 476 LIRRIAHAPFGYLLRATRDSPLRAEAIGLDVRGRQLAAFVIAGLFAALAGTVFVFAKGSV 535 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P + +++ + +V++GG+ +LS AI +G+ + + Sbjct: 536 FPTILAVGQSVDALLMVLIGGVQALSGPIAGAAIFVGIEDWVGRL--------------- 580 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 ++ + + V ++ + Sbjct: 581 -PYWRSIFGVIILAVCILAPQGIAG 604 Score = 56.0 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 89/303 (29%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + A GLS++ G +++ + +GAY + Sbjct: 12 LLAGLADASSLFLVAAGLSLIFGVTRIVNFAHGSLFMLGAYVAYSAVTWLPTGFLGFWGG 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + A +I GL + A A L +L+ + + G Sbjct: 72 MLAAAVAVALIGGLIEIVILRRLYASAELYQLVATFGVLLVIQDVALAIWGPEDLLAPRA 131 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G + ++ + A++ L L RT R ++++ Sbjct: 132 PGL-------GGALRIFGEPVPQYDLLLIAAGPVVLAAVWLVLNRTRWGTLVRAATEDRE 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L + F + + G+AGA + IV++GG+ Sbjct: 185 MTGALGIDQARLFTTVFMLGAFLAGLAGALQTPR--EAVSLALDLDVVVEAFVIVVVGGL 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A ++ + F T L + + ++++R + Sbjct: 243 GSIGGAYAAAILIGVLNAFT--------------LLWFPTLATVLPFLVMAAILVVRPYG 288 Query: 339 LLR 341 L Sbjct: 289 LFG 291 >gi|117924328|ref|YP_864945.1| branched-chain amino acid ABC transporter permease [Magnetococcus sp. MC-1] gi|117608084|gb|ABK43539.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Magnetococcus sp. MC-1] Length = 384 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 105/350 (30%), Gaps = 35/350 (10%) Query: 14 ILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ A+V P+L Y+ S+ + L + + A ++ G G+LSL Sbjct: 23 LVLGAAIVVPILNLAVAPESPYHIPNYVVSLMGKYLAFALLALSADLIWGYAGILSLGHG 82 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+G Y+ + R + LP ++ A A L++ Sbjct: 83 AFFALGGYAMGMYLMRQIGDRGVYGNPELPDFMVFLNWHELPWYWHGFEWFAFAALMVLV 142 Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172 + + + + + D + + F Sbjct: 143 VPGLLALVFGWFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDLLGF 202 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 ++ V LS + ++ + + +RD + + + KL Sbjct: 203 DLHDDTTRAALFSVTALALALSYGVCRYITASKLGRVLLAVRDAESRTRFMGYRVENYKL 262 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 F V++ G+AGA + I+P F +I +I V +GG +L ++ Sbjct: 263 FVFVVAAMMAGLAGALYVPQVGIINPGEFSPGNSIEIIIWVAVGGRGTLYGAVLGAVLVN 322 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 G + ++ V L ++ L Sbjct: 323 YGKTYFTG--------------ALPEAWLYMLGALFVAVTLFMPQGVVGL 358 >gi|306845382|ref|ZP_07477957.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO1] gi|306274298|gb|EFM56110.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO1] Length = 360 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +YY+ L S ++ L T Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|183603798|ref|ZP_02721345.2| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae MLV-016] gi|183578498|gb|EDT99026.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae MLV-016] Length = 292 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 107/303 (35%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 8 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ G+++ + + IA LI + +L G Sbjct: 68 AMLVTAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 118 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|313126233|ref|YP_004036503.1| amino acid/amide ABC transporter membrane protein 1, haat family [Halogeometricum borinquense DSM 11551] gi|312292598|gb|ADQ67058.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Halogeometricum borinquense DSM 11551] Length = 337 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 104/344 (30%), Gaps = 27/344 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L A ++ L FL + + + +YVM A GL+++ G +G+L+ Sbjct: 3 ALLTAPLFLDALGDFLTLETLSSVLVNGLSKAALYVMLASGLTLIFGLMGVLNFAHGSLT 62 Query: 75 AIGAYSYVILGS--------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 IGAY ++ + ++ + + + + + Sbjct: 63 MIGAYLGGLVMVVLAGSAAGPGTRFLAFFAAVAVAFAALSALGAVLEVGLIRTLYDRPPL 122 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 Y + T ++ + + + + I + + Sbjct: 123 YQILLTFGLTLMLDELARIVVSFYG-----LQPISDWQAAFATKPQILVQQVDLGIISVS 177 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + +L +I +L +T R ++ + +L + FA+ Sbjct: 178 GLALFEILFGVLTVVAIWAFLTQTRYGLYIRAGSEDAEMIEALGVDVRRVFTFVFAIGVG 237 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AG A + + +VI+GG+ + A I+ V Sbjct: 238 IAGVAGVLLAWDPSWGASVPLAAETLLPAFVVVIVGGLGTFRGTVVAGTIVGLV------ 291 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + +F + + L +V++++ L + Sbjct: 292 --DATMTWWFQNAIAFTGLPQLTIFLILVVVLILKPQGLFGVEE 333 >gi|330938380|gb|EGH42006.1| inner-membrane translocator [Pseudomonas syringae pv. pisi str. 1704B] Length = 411 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 4/232 (1%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 139 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 198 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + Sbjct: 199 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 256 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 257 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 316 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 S G+ G A S+ S I +V+LGG+ L+ A Sbjct: 317 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAF 366 >gi|332717179|ref|YP_004444645.1| branched chain amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] gi|325063864|gb|ADY67554.1| branched chain amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 335 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 112/320 (35%), Gaps = 27/320 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 L++ + ++ +I+ + + +V G G+ +L + GAY+ Sbjct: 28 LLIIIAAIAGYFLFPDNLALLTRIIAIALLVLSIDLVTGYCGVATLGHAALFGAGAYAAG 87 Query: 83 ILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 I + Y L+ + A + G G++ G L+ G + ++ + +F K Sbjct: 88 IAAAHYGITDPLLMTLIGAAVGGIAGLLSGTILLRAHGLPQLVLSIAVVHLFHEAANKAS 147 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 T G G+ GT F +Y Y + + L + + Sbjct: 148 DWTGGSDGLAGVSPDALFGT------------FEFDLYGRTAYIYGVCLLLLVFLALRVV 195 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + R ++ + ++ ++ L FA+S G+ GA A S + D Sbjct: 196 VNSPFGMLCRGVKQDSIRIQAMGGSVNGTILKMFAISGIVAGIGGALNAISTQVVGLDSL 255 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 F+ + + +++LGG SL T + ++ N +++ Sbjct: 256 SFTLSAEALVMLVLGGAGSLYGALIGTVTFMWFEDVVSAANPFHW--------------L 301 Query: 322 TLMVIALFLVILMRSHSLLR 341 T++ + L V+L L Sbjct: 302 TIVGLLLIAVVLFAPRGLYG 321 >gi|323701783|ref|ZP_08113454.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] gi|323533319|gb|EGB23187.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574] Length = 293 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 93/288 (32%), Gaps = 11/288 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ Y +GAY + G S + + Sbjct: 8 LINGISLGSIYALIALGYTMVYGIVQLINFAHGDVYMVGAYLGFFATAILGWSFLPALVM 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+++ + K + I LI + L + L Sbjct: 68 AMIVCAILGVVIEKLAYKPLRNAPRITALITAIGVSLFLEYGTMLLVTPQVRTFPQVLPE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + +L+ L + + +T I A R + +++ Sbjct: 128 VQWKL----------FGNLTVSNRQVIILVITIVLMVLLQYIVHKTKIGKAMRAVSYDKQ 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + FA+ SA AG + I+P M + +LGG+ Sbjct: 178 AAQLMGINVNQTISATFAIGSALAAAAGVLVGIYYNAINPLM-GIMPGLKAFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + +L V + G + + F + + Sbjct: 237 GIIPGAMTGGFLLGIVEAMVSGYGKSLYRDPVAFVILIIILIVKPAGL 284 >gi|15596270|ref|NP_249764.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa PAO1] gi|116049002|ref|YP_792196.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa UCBPP-PA14] gi|218892964|ref|YP_002441833.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa LESB58] gi|296390563|ref|ZP_06880038.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa PAb1] gi|313106027|ref|ZP_07792286.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa 39016] gi|115122|sp|P21627|BRAD_PSEAE RecName: Full=High-affinity branched-chain amino acid transport system permease protein BraD gi|9946989|gb|AAG04462.1|AE004539_4 branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa PAO1] gi|216864|dbj|BAA14255.1| integral membrane protein [Pseudomonas aeruginosa] gi|115584223|gb|ABJ10238.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa UCBPP-PA14] gi|218773192|emb|CAW29004.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa LESB58] gi|310878788|gb|EFQ37382.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa 39016] Length = 307 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIAFIAITLLAMMGLDSVPL 70 Query: 99 SAMIS-GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + A ++ I I + + Sbjct: 71 MMLAAFAASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + T + F + V+ + + + + L++ R+ + A R ++ Sbjct: 131 AIPTLLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A I+ F I + +LGG Sbjct: 191 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L + + ++ F L LV+L R Sbjct: 250 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 296 Query: 338 SLLRL 342 +L Sbjct: 297 GILGR 301 >gi|317405430|gb|EFV85742.1| hypothetical protein HMPREF0005_01546 [Achromobacter xylosoxidans C54] Length = 328 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 121/310 (39%), Gaps = 30/310 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + ++ ++ ++L+Y + A L++++G G++S + +GAY+ +L + Sbjct: 26 QWQGEPFLLALFGRVLVYGIAALALNLLLGYGGMVSFGHALYLGLGAYAVGVLNHYGIEN 85 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 WL + + A G++ G ++ G + TL +++F + + Sbjct: 86 GWLHLLAALGACAAVGLVSGYVVMRTSGIAFIMITLAFAQMFYFLATGLEGFGG------ 139 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 SL F + + +YY G+ L+ + + L + R Sbjct: 140 ---------DDGMSLFAGSDFGLFRLDTPLALYYTAFGVLLLALAALRRLVQAPFGMVLR 190 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 + N++ +L + +L+A+ +S+ G+AG A +SP ++ + +I Sbjct: 191 GCQANERRMRALGFATLRYRLAAYVLSAMVCGVAGVLLANLTLYVSPSYLAWTTSGELIV 250 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V LGG+ ++ + + E + ++ +M + + V Sbjct: 251 MVALGGLGTVVGPVAGALAFLLLEEGLKLLTDHW---------------MLVMGLLIVGV 295 Query: 332 ILMRSHSLLR 341 +L+ L Sbjct: 296 VLVSRRGLYG 305 >gi|300869773|ref|YP_003784644.1| sugar ABC transporter inner membrane protein [Brachyspira pilosicoli 95/1000] gi|300687472|gb|ADK30143.1| ABC sugar transporter, inner membrane subunit [Brachyspira pilosicoli 95/1000] Length = 405 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 101/315 (32%), Gaps = 20/315 (6%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 + + ++ + + + + A G++ V+ G + L+ Sbjct: 38 FLTIVALLILYVFFVIAGRNFFTFDTFSLILRNSYFIGFLAIGVTFVI-ITGGIDLSIGS 96 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 A ++ + + +W ++ + ++ G I G F Sbjct: 97 LSLFAAMVGGVMITNFKTPMWAVLIIVIAVATLGGFINGCLISYFHLPPFIAT------- 149 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + +T G +GI + + T +FR + +++L + Sbjct: 150 -----LGMLMVTKGLSGIVSKSQTIYYPTITDPDYGWFRVLFNATESNFPSGFIMLAIFT 204 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + + I+L +T + + N++A K+ A+ ++ F G+ G FAAS Sbjct: 205 IISVIVL--TKTIVGRYIFALGSNEEAARLSGIKTNKWKIIAYTIAGFFCGIGGLTFAAS 262 Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 ISP + E + ++VI GG+ S+ I+ + + F Sbjct: 263 YSSISPGAGQGYEFDAIAAVVIGGTSLSGGVGSIIGTIIGVYIMSVLKVGLPSVGVEQFF 322 Query: 308 SLLKFDCSFNMRHTT 322 + Sbjct: 323 QYFTIGIVVIIAVLI 337 >gi|134287660|ref|YP_001109826.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134132310|gb|ABO60045.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia vietnamiensis G4] Length = 305 Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 17/305 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+++ G +G++++ IGAY+ + L PV Sbjct: 18 LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTVYLFSWFSQNVWHALTPVYFFF 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + L + +L W + + Sbjct: 78 AILAAFALAFAAGWLAEWAL--IRHLYKRPLDTLLATWGLSLGMQQVFRSTFGPKEVSPA 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + + +V+ ++ ++L L R+ R N+ + Sbjct: 136 LPDWLMGSWEPTPGLDIPVSGMFVMGLALLMTGGLLLALYRSRWGLRVRATVANRPMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AGA F A + + +V GG SL Sbjct: 196 AGINTRRTDRMTFAIGCGIAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + L ++ + +++++R L Sbjct: 254 GTVASAFGIAQMQSISEFFLS-------------GSIARVLTLLTVVVILMLRPQGLFAS 300 Query: 343 RTPSN 347 + Sbjct: 301 KVRRV 305 >gi|107026087|ref|YP_623598.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|116692729|ref|YP_838262.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|170738021|ref|YP_001779281.1| urea ABC transporter, permease protein UrtB [Burkholderia cenocepacia MC0-3] gi|105895461|gb|ABF78625.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia cenocepacia AU 1054] gi|116650729|gb|ABK11369.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia cenocepacia HI2424] gi|169820209|gb|ACA94791.1| urea ABC transporter, permease protein UrtB [Burkholderia cenocepacia MC0-3] Length = 305 Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 17/305 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+++ G +G++++ IGAY+ + L PV Sbjct: 18 LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTVYLFSWFSQNVWHALTPVYFFF 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + L + +L W + + Sbjct: 78 AIVAAFALAFAAGWLAEWAL--IRHLYKRPLDTLLATWGLSLGMQQVFRSTFGPKEVSPA 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + + +V+ ++ ++L L R+ R N+ + Sbjct: 136 LPDWLMGSWEPTPGLDIPVSGMFVMGLALLMTGGLLLALYRSRWGLRVRATVANRPMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AGA F A + + +V GG SL Sbjct: 196 AGINTRRTDRMTFAIGCGIAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + L ++ + +++++R L Sbjct: 254 GTVASAFGIAQMQSISEFFLS-------------GSIARVLTLLTVVVILMLRPQGLFAS 300 Query: 343 RTPSN 347 + Sbjct: 301 KVRRV 305 >gi|328948224|ref|YP_004365561.1| ABC-type transporter, integral membrane subunit [Treponema succinifaciens DSM 2489] gi|328448548|gb|AEB14264.1| ABC-type transporter, integral membrane subunit [Treponema succinifaciens DSM 2489] Length = 560 Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 37/330 (11%), Positives = 83/330 (25%), Gaps = 25/330 (7%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y IL V L G S I ++ Q + +A G++ ++ G L+ Sbjct: 229 YLAILVFFIVCIILAPLSGNGNLLSLPNIFTILEQSSTRMFYALGVAGLILLAG-TDLSV 287 Query: 71 VIAYAIGAYSYVI-------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 A+GA + + + +G+ W + + + + + Sbjct: 288 GRMVALGAVVTGLVLHPGQNIVTFFGMGPWDFTAIPMAVRVIMALFSSVFLCVLFSAFAG 347 Query: 124 IA-----TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 + LI + + G +G V + V Sbjct: 348 VFSARLKIHPFISTLATQLIIYGLLFFGTSGTPVGSIDSGIKDVFGGRWVLGVINGELVT 407 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + +++ +T + N +A ++ L F ++ Sbjct: 408 FPK----LIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNSEAASVSGISVFKVTLGVFIMA 463 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILI 292 F G F A + + I+ ++ GG+ + I Sbjct: 464 GIFYGFGAFFEAFKANA--SAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFT 521 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + + Sbjct: 522 SLTYCLTFLGIDTNLQFVFKGFIIIAAVAL 551 >gi|332530620|ref|ZP_08406553.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332039903|gb|EGI76296.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 325 Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 108/294 (36%), Gaps = 8/294 (2%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 PL L L + + ++ I +FA L +V+G G++SL + +GAY+ Sbjct: 18 PLFWLLALASPWYLSGHALLINEVAIVALFALSLDLVMGYAGVVSLGHAAFFGMGAYAAA 77 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + + +S G + L ++ L + T+ ++ I + K Sbjct: 78 LFAKHINPDPVMGLFFGIAVSTVLGALASLSIMRGTSLTLLMVTMGVALILMELANKLDW 137 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ + + F F +Y + L + F+ + Sbjct: 138 LTGGADGLQGV--------IMGPVHVPFVGRFEFDLYGQVAAWYSLAVLFVFFLLSRRFV 189 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 ++ + +RDN+ ++ + + +++ G AGA A + S ++F Sbjct: 190 QSPLGGTLMALRDNRLRAMAIGIPVTARLALIYTIAAGVAGAAGALLAQTTSFASVEVFA 249 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 F + ++ +V++GG L AI + + + Y+ + Sbjct: 250 FDRSADLVLLVVIGGAGWLYGGVIGAAIFKVLQDWISSITPQYWTFWIGLFLVV 303 >gi|90019877|ref|YP_525704.1| ABC-type branched-chain amino acid transport system permease-like protein [Saccharophagus degradans 2-40] gi|89949477|gb|ABD79492.1| inner-membrane translocator [Saccharophagus degradans 2-40] Length = 432 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 99/326 (30%), Gaps = 19/326 (5%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 + V +L Y ++ + L Y + A L +V G G+LSL Sbjct: 24 FALTVLVPLSNILMPEGSFLHVPTYTMTLIGKYLCYALLALALDLVWGYCGILSLGHGAF 83 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 +A+G Y+ + R + LP D A L++ + Sbjct: 84 FALGGYAMGMYLMRQIGDRGMYGNAELPDFMVFLNWQELPWYWMGFDNFGFAMLMVLLVP 143 Query: 134 QNILIKWKPITNGK-------------------AGIYVADRLYFLGTTVRSLIRFFRFPS 174 + + + ++ D + + F Sbjct: 144 GLLAFVFGWLAFRSRVTGVYLSIITQAMTYALMQAFFLNDFGFGGNNGLTDFKDILGFDI 203 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 I ++ + G + + ++ + +IRD + L + KL Sbjct: 204 QANATRITLFMLSGGAVICAYLLCRFITTSKFGRVLVSIRDAESRSRFLGYRVEHYKLFV 263 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F +S+ G+AGA F I+P F +I ++ V LGG +L ++ V Sbjct: 264 FVLSAVLAGIAGALFVPQVGIINPGEFNPVNSIEIVIWVALGGRGTLYGAVIGAVVVNYV 323 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRH 320 G + +L + + Sbjct: 324 KSFYTGAMPEMWLFMLGGIFVVSTIY 349 >gi|315221925|ref|ZP_07863836.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Streptococcus anginosus F0211] gi|315188891|gb|EFU22595.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Streptococcus anginosus F0211] Length = 289 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + L+ +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYFLINSLHLNFFLALIL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + + IA LI + L G Sbjct: 65 AMIGTAVLGVLVEFLAYRPLRNSTRIAALITAIGVSFFLEYVMVYFVGANTRS------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I R+ + +L+ L + + +++T + A R + + Sbjct: 118 ----FPQVIETVRYNFGPISLTNIQLMILVISLILMVLLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++L+R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILILILLVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|332559764|ref|ZP_08414086.1| branched chain amino acid ABC transporter inner membrane protein [Rhodobacter sphaeroides WS8N] gi|332277476|gb|EGJ22791.1| branched chain amino acid ABC transporter inner membrane protein [Rhodobacter sphaeroides WS8N] Length = 308 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 113/320 (35%), Gaps = 28/320 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +LA+ +L + Y + +IL+ +A G +I G GLLSL + +A Sbjct: 1 MLALHLAVLAGIAALQFVLPAYHHTNAARILVLATYAIGFNIAFGYTGLLSLGHALFFAG 60 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y+ +L + G W + + G +GL +L+ G I TL+ ++ F Sbjct: 61 GMYATGLLVDQGGWQPWAALLAGPVAGGVLAACVGLLALRTAGPAFMIVTLMFAQAFHLA 120 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ W T G G R + Y + + Sbjct: 121 ILYWGRFTGGDEG-------------FTLSGAARRIGPFDLADPATRYGAAFLLFAAALL 167 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L L R+ +R+N++ L AKL A A+S G AGA + + Sbjct: 168 GCLALVRSRTGRVLIAVRENEERTRMLGYDTFRAKLLALALSGLLSGAAGATYGLMFGYV 227 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +I+ + V+LGG ++ TA+L +++ + Sbjct: 228 GGSFAAIQYSILPLIWVLLGGAGTVLGPLLGTALLFYLIDWASSI--------------- 272 Query: 317 NMRHTTLMVIALFLVILMRS 336 ++ L L++L Sbjct: 273 TTASQFVVGAVLILLVLFAP 292 >gi|317123162|ref|YP_004103165.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter marianensis DSM 12885] gi|315593142|gb|ADU52438.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter marianensis DSM 12885] Length = 301 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 90/305 (29%), Gaps = 16/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + +++ Y +GAY + + + Sbjct: 8 LINGIQLGAIYALIAVGYTMVYGVVKMINFAHGDVYMVGAYVAFAVTAAAAAGSVSVGQ- 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + A + + + + + + Sbjct: 67 GLVLFAVGLVAAMAGCALLGALIERTAYRPLRGQPRLVALTTAIGVSLLLENLMQIIAGP 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +LI + V + LL + A + + RT + A R + + Sbjct: 127 NPRPFPALIPARQIDLGGVFLNVRFAVALLVALVMMAGLQYLVMRTRVGKAMRAVAFDLD 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + F + SA AG + RI P M + +LGG+ Sbjct: 187 AARLMGINVNRIIAATFMLGSALAATAGVLVGVTYSRIDPFM-GILPGLKAFVAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ I+ + + + + L +V+L + Sbjct: 246 GNIPGAMVGGLIMGLAEVGVASIRSELTGA--------------VAFLILIVVLLFKPTG 291 Query: 339 LLRLR 343 LL R Sbjct: 292 LLGER 296 >gi|300312953|ref|YP_003777045.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075738|gb|ADJ65137.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 317 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 133/324 (41%), Gaps = 29/324 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + ++ LL L +Y + +ILI+ M A L+ ++G G++S + + Sbjct: 4 LFIPLLLVLALLLPLLAQASGMEYYIGVLTRILIFAMVAASLNFILGYGGMVSFGHAVFF 63 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY I S WL+ ++A+++ G+++G+ +L+ R Y + T+ ++++F Sbjct: 64 GLGAYVTAIASFHGVTSAWLIWLLAALVTALVGLVIGVIALRTRAVYFIMITMALAQLFY 123 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + ++ A L G + Y+V+L S Sbjct: 124 YFFVGFRYYGGDDGLQVTARPLLGFGLDMSGDN--------------AFYWVVLAWLAAS 169 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 ++ L + A IR N++ ++ + KL+AF +++ G+AG+ S Sbjct: 170 FILLQRLLASRFGLALNAIRQNERRAQAIGYPALRYKLAAFVIAAVIAGIAGSLIGMSNL 229 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 SP + +S++ I++ +V LGG+ A + + E+ Y+ Sbjct: 230 FASPKLLHWSQSGILLVMVALGGVGYFYGGLLGAAAFLLLEEVLSTHFEYW--------- 280 Query: 315 SFNMRHTTLMVIALFLVILMRSHS 338 + + L LV+++ Sbjct: 281 ------QIYVGLILLLVVMVAPRG 298 >gi|300088537|ref|YP_003759059.1| inner-membrane translocator [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528270|gb|ADJ26738.1| inner-membrane translocator [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 294 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 98/302 (32%), Gaps = 20/302 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y++ A GL+++ G + + A+G + + + G + + PV Sbjct: 7 ILNSAVTGSLYLIAAVGLTLLYGLVKFPNFAHAEFMAVGGFLGYFIAEQLGWPLPVAYPV 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +G G + K D + + + + T G Sbjct: 67 AFLGAGIVGFLSYRGVFKPLADKAGTTIIHLMVASMALGFILRHTTGEIWGFS------- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ I + + + + +++ + + L RT I A R N + Sbjct: 120 ---SLTFGIIWPIYEIGSLRISLHWIIIIVTAIAVGVGMHYLLTRTKIGKAIRATASNPR 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + +S+ G+AG F A + ++V+LGG+ Sbjct: 177 LALAAGIDTTRVLMITWFLSAGLAGIAGLFRAVETRITPYVGWDIILPT--FAVVVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S A + + + + L + I L +V++ R Sbjct: 235 GSFYGAMVAAFAIGLMENIGVVL--------LSEIGLSTQYRMAIPFIVLIIVLIFRPQG 286 Query: 339 LL 340 L Sbjct: 287 LA 288 >gi|218441779|ref|YP_002380108.1| inner-membrane translocator [Cyanothece sp. PCC 7424] gi|218174507|gb|ACK73240.1| inner-membrane translocator [Cyanothece sp. PCC 7424] Length = 377 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 108/373 (28%), Gaps = 67/373 (17%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC-------------------------- 70 +Y+ S+ + IY +FA GL++ G GL++ Sbjct: 3 QYLVSLITSVAIYALFALGLNLQWGFTGLINFGHVAFMTLGAYATAQLSLLGVPVIIAVG 62 Query: 71 -VIAYAIGAYSYVILGSRYGLSIWLLI--------------------PVSAMISGACGMI 109 + +A + + +L I G+ G+ Sbjct: 63 VGLFFAALLGLLIGTSTLRLREDYLAIVTIGVSELLRLVVNNEQWLNQYGQWREGSFGIQ 122 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 L F+ +I I +W+ + I Sbjct: 123 GYPLPLNFQPSPFISIVMIAILTLLAIWSEWQLWQAVSKQWKEGKEIKDKSYQPNQPISI 182 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLS-----------------ASIILWLRRTAISNAWRT 212 + + +F+Y + ++ +L R+ + Sbjct: 183 IIWGIIATSFIVFVYVNGIIALSNYTYQAGLMLLSLLILGVIYGLLEFLVRSPWGRILKA 242 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR++++ +L + + KL AF + A G+AG FFA I P F+ I Sbjct: 243 IREDEEIPRALGKNVFWYKLQAFMLGGAIAGLAGTFFAWQITTIYPTNFEPLLTFYAWII 302 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V+LGG + + I L + L ++ + L +++ Sbjct: 303 VVLGGAGNNAGTILGAIIFWAYDSLTRFILP---QVALLDSTQIGAFRIMVIGLILMVLM 359 Query: 333 LMRSHSLLRLRTP 345 + R +L + Sbjct: 360 VWRPQGILGKKEE 372 >gi|159044067|ref|YP_001532861.1| hypothetical protein Dshi_1518 [Dinoroseobacter shibae DFL 12] gi|157911827|gb|ABV93260.1| hypothetical protein Dshi_1518 [Dinoroseobacter shibae DFL 12] Length = 336 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 85/312 (27%), Gaps = 19/312 (6%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---------LLIPVS 99 + A G++++ G L + A G + ++ + L +P Sbjct: 25 LALGALGVTLIYGILRFSNFAHGDTMAFGTMATILFTWAFQSIGISLGPLPTALLALPFG 84 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +++GA + KF A+ + + + + + Sbjct: 85 ILVTGALLVGTDRLVYKFYRQQKAVPVIFVIASLGVMFVTNALVRFIIGPDDQRFADGER 144 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 R + ++ + A + +L RT + R DN+ Sbjct: 145 FIISAREFRNLTGLDEGLALRTTQGLTVVTAVIVVALLFWFLNRTRTGKSMRAFSDNEDL 204 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + + +A +AG + + F + + + I+GG+ Sbjct: 205 ALLSGINPERVVMVTWLIVAALATVAGTLYGLDKSF--KPFTYFQLLLPIFAAAIVGGLG 262 Query: 280 SLSKIAKATAILIG--------VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 S ++ ++ + + L +V Sbjct: 263 SPLGAIAGGFVIAFSEVTITYAFKKVLEYLLPEALEPDGLVQLLSTDYKFAVSFAILIIV 322 Query: 332 ILMRSHSLLRLR 343 +L + L + + Sbjct: 323 LLFKPTGLFKGK 334 >gi|317405152|gb|EFV85494.1| hypothetical protein HMPREF0005_04785 [Achromobacter xylosoxidans C54] Length = 424 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 111/326 (34%), Gaps = 26/326 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ + L +Q+LI +FA +++ G G+LS + + Sbjct: 11 AGLLLIVCVAALCALPWLLPAGQLVAAVQMLIAALFACAFNLLAGQGGMLSFGHAAYFGV 70 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G ++ + + G + L P+ + G G++ GL + F + +++ + Sbjct: 71 GTFATIHAMNALGGAGLLPTPLMPLAGGVAGLLFGLVAGWFATMRAGVYFSMITLALAEL 130 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 L P G G ++ +Y+++L +S + Sbjct: 131 LHALAPHLKGVFG-----------GEAGLSAMRMPAWGFTFGSDVEVYFLVLAWVLVSLA 179 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT + +R+N L K FA+S+ F G+AG A + + Sbjct: 180 ALYGLTRTPLGRLTLGLRENANRLRYLGYRPHTLKTMVFALSAMFAGIAGGLQALNIEAG 239 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + +F+ + + +GG+ + +IL + + + + Sbjct: 240 NYVLFEVKLSTDAVLFAYIGGVNAFLGPVLGASILTFLSQTLADITRSW----------- 288 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 I LV+L L+ L Sbjct: 289 ----LLYQGILFVLVMLFVPDGLVGL 310 >gi|153955361|ref|YP_001396126.1| hypothetical protein CKL_2743 [Clostridium kluyveri DSM 555] gi|219855780|ref|YP_002472902.1| hypothetical protein CKR_2437 [Clostridium kluyveri NBRC 12016] gi|146348219|gb|EDK34755.1| LivH [Clostridium kluyveri DSM 555] gi|219569504|dbj|BAH07488.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 291 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 25/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ Y GA+ + + + Sbjct: 7 LVNGLALGGVYALIAIGYTMVYGIVKLMNFAHGDIYMAGAFFGFLAVKNLNSGFIPTLII 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + S G+I+ + K + I I S +L + G Sbjct: 67 AMVGSALLGIIIEKIAYKPLRNSSRITLFITSMGISLLLENGFRVIFGPNPRP------- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L++ + LL L + + + RT + A R + + Sbjct: 120 ----FPELLKVKLYKIGDFQINNLQIVTLLICFILVILLQIIVYRTKMGKAMRAASFDTE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AG S +I P M + ++GG+ Sbjct: 176 ATELMGINVNNTISLTFAIGSALAAAAGVLIGMSYPKIDPYM-GMIPGLKAFIAAVVGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + +L + + + + + Sbjct: 235 GLIPGAMVGGIVLGISEIFTKAFISTKLSDGIAYIILIIILI-------------FKPSG 281 Query: 339 LLRLR 343 LL + Sbjct: 282 LLGKK 286 >gi|304394017|ref|ZP_07375940.1| ABC transporter ATP-binding protein [Ahrensia sp. R2A130] gi|303293457|gb|EFL87834.1| ABC transporter ATP-binding protein [Ahrensia sp. R2A130] Length = 359 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 121/331 (36%), Gaps = 28/331 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A L L + A S ++ + + M A L + G G++SL + A+ Sbjct: 29 VAYWVVAALLLIMPAIASGFVLNQIFGWSFVLGMIALSLMFLGGYGGMVSLAQLTIAAVA 88 Query: 78 AYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 Y I G W+ +P++ +I+ G +G +++ G Y + TL ++ Sbjct: 89 GYMVAIFGVSSIDAVSLGWPWWVAVPLALIIAVLFGTAIGALAVRTEGIYTIMITLAIAS 148 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F + + NG +G G R+ I YY+ L Sbjct: 149 AFFYFTRQNYVVFNGFSGFNGVFPPKLFGVDWRAD--------------IPFYYLSLFFA 194 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ +L+L R A + +RDN + +L + +++A A ++ G+ G Sbjct: 195 TLAYLAVLYLSRAPFGLALQGVRDNPRRMAALGFNVNAHRVAAHAFAAFIAGIGGILLTW 254 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 +ISP I ++ I ++GG+ + + + + S + Sbjct: 255 QSSQISPGTAGTGPVIDILVIAVIGGLGRPIGPFIGAIVYVVLKTFAIDILTSLGLSGDR 314 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F L+ I+ L++ LL L Sbjct: 315 F--------QLLVGISFLLIVFFSPDGLLGL 337 >gi|222478666|ref|YP_002564903.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] gi|222451568|gb|ACM55833.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] Length = 297 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 103/317 (32%), Gaps = 24/317 (7%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 + L + + A GLS++ G LG+L+ Y +GAY + + Sbjct: 1 MSLPSLVPLIGIADVIIGLSLGSRLFLIAVGLSLIFGVLGVLNFAHGGFYMLGAYVTLAV 60 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + + WL + A+ G G + +++ D + + F +L+ + + Sbjct: 61 VTNVVDNFWLAVVAGALAVGVVGAAIEFAAIRPLYDRVDADLDQLIVTFGFVLVIHEAVR 120 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 + + F + + V+ + S+ L++ RT Sbjct: 121 F--------IWGSGSYSIDPPDVFNFSVALGGSTFSAYRLVVIGLAVAVLVSLWLFITRT 172 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + R +++ L + F + S G+ GA + + + Sbjct: 173 YFGSLVRGTSSDREMASMLGVDVPRLYTGVFFLGSVLAGLGGALSSPLQS--TSPALGDQ 230 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 I +V++GG+ S+S ++ + L + + Sbjct: 231 VIIDAFIVVVIGGLGSMSGAFVGAMLIGMMQSLGPQF--------------ISAGSIAIP 276 Query: 325 VIALFLVILMRSHSLLR 341 +A+ +V+L R L Sbjct: 277 FLAMVIVLLFRPEGLFG 293 >gi|332522542|ref|ZP_08398794.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus porcinus str. Jelinkova 176] gi|332313806|gb|EGJ26791.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus porcinus str. Jelinkova 176] Length = 289 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 110/303 (36%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ + +GA+ L + + L+I++ + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLFMMGAFIGYYLINVFHLNIFVALLL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+ GM++ + + IA LI + +L G L Sbjct: 65 TMVITACLGMLIEFLAYRPLRQSTRIAALITAIGVSFLLEYGMVYLVGAEARAFPQALKT 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + V +L+ L S+ +++T + A R + + Sbjct: 125 VK-----------YSLGPVSISNVQIIILVVSLLLMISLQFVVKKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I+P M + I +LGG+ Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGIKAFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + F+ ++ L L++L+R Sbjct: 233 GIIPGAALGGFMIGLIETI-------------SVSIGFSSYRDAIVYAVLILILLIRPAG 279 Query: 339 LLR 341 LL Sbjct: 280 LLG 282 >gi|149010625|ref|ZP_01831996.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|147765106|gb|EDK72035.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] Length = 289 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 65 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGAISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAF-------------EMSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|116515326|ref|YP_816147.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|225856426|ref|YP_002737937.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae P1031] gi|225858560|ref|YP_002740070.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae 70585] gi|225860724|ref|YP_002742233.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae Taiwan19F-14] gi|237650407|ref|ZP_04524659.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae CCRI 1974] gi|237822480|ref|ZP_04598325.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae CCRI 1974M2] gi|298230939|ref|ZP_06964620.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255820|ref|ZP_06979406.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502535|ref|YP_003724475.1| branched chain amino acid ABC superfamily transporter membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|116075902|gb|ABJ53622.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|225722026|gb|ACO17880.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae 70585] gi|225724867|gb|ACO20719.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae P1031] gi|225727605|gb|ACO23456.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae Taiwan19F-14] gi|298238130|gb|ADI69261.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|327390107|gb|EGE88450.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA04375] Length = 289 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 65 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILGISLILMILLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|218886578|ref|YP_002435899.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757532|gb|ACL08431.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 295 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 87/306 (28%), Gaps = 26/306 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y S +Y + A G S++ + G+++ ++G L GL I Sbjct: 11 QYTLSGLTTGSVYALLALGYSLIFNATGIVNFTQGDFLSLGGLVLYSLLVSQGLPIVAAF 70 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + ++ G ++ L+ I + ++ ++ G Sbjct: 71 PATILVVALAGALVERVCLRPARSRQMIILIFITMAASTLMRGLMKEGWG---------- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 L + L F + +V+ A++ + R T A R + Sbjct: 121 -KLPLALPPLSPEVPFRLLGAVLTPQNLWVMGMTLCGIAALAWFFRATVTGKAMRAAAAD 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + + +FA + A + G + + +LG Sbjct: 180 PRTARLMGVEVERLTTLSFAFAGALGALGGMLITPITSL--SYDIGLMLGLKGFAAAVLG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G S + +L G + L+ L LV+ +R Sbjct: 238 GYGSFAGAVAGGVLLGLFESYGAGY-------------VTSAYRDVLVFGLLILVLFVRP 284 Query: 337 HSLLRL 342 L Sbjct: 285 QGLFGT 290 >gi|254239431|ref|ZP_04932753.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa 2192] gi|126192809|gb|EAZ56872.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa 2192] Length = 307 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEMYMIGSYIAFIAITLLAMMGLDSVPL 70 Query: 99 SAMIS-GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + A ++ I I + + Sbjct: 71 MMLAAFAASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + T + F + V+ + + + + L++ R+ + A R ++ Sbjct: 131 AIPTLLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A I+ F I + +LGG Sbjct: 191 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L + + ++ F L LV+L R Sbjct: 250 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 296 Query: 338 SLLRL 342 +L Sbjct: 297 GILGR 301 >gi|330837053|ref|YP_004411694.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Spirochaeta coccoides DSM 17374] gi|329748956|gb|AEC02312.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Spirochaeta coccoides DSM 17374] Length = 306 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 86/303 (28%), Gaps = 14/303 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L ++ GAY + + L Sbjct: 11 LMNGLTLGGIYALIALGYTMVYGILKFINFAHGDVLMAGAYIGLFIFDFLRGDSPLGAWT 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A A + MGL SL + L+ ++ + Sbjct: 71 VAAFFIAMVLSMGLTSLLGMVIERTAYKPLRKATRLAPLLSAIGVSFILSNTAAWMFGTQ 130 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V+ +L + ++ L++ +T + A R +Q+ Sbjct: 131 SRKYNYPFDN-TSIHLGGVVITPHQILILGVSLVMMLALKLFVDKTRMGKAMRATSLDQE 189 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ SA + G A + ++GG+ Sbjct: 190 TAQLMGINVNHIISMTFAIGSALAAVGGILIALDFKV--YASMGMMTGLKAFVAAVVGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++S +L + + T+ L +++L+R Sbjct: 248 GNISGAMLGGVLLGLLETFGVAVLG-----------IPQGLKDTIAFGVLIIILLVRPEG 296 Query: 339 LLR 341 LL Sbjct: 297 LLG 299 >gi|322376942|ref|ZP_08051435.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|321282749|gb|EFX59756.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus sp. M334] Length = 292 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 8 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 68 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 118 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|332076029|gb|EGI86495.1| branched-chain amino acid transport system / permease component family protein [Streptococcus pneumoniae GA41301] Length = 289 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 5 LVNGLILGSVYALIALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 65 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|22299135|ref|NP_682382.1| branched-chain amino acid ABC transporter permease protein [Thermosynechococcus elongatus BP-1] gi|22295317|dbj|BAC09144.1| branched-chain amino acid ABC transporter permease protein [Thermosynechococcus elongatus BP-1] Length = 289 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 90/303 (29%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + I + A GL++ G L L + GAY ++ + + Sbjct: 9 FVNGLAVGSIIALAAVGLTLTFGILRLPNFAHGDFMTAGAYLTLVANATGLNIWLSMAIG 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +G + L R TLI+ I + L++ I + Sbjct: 69 GLGTAGLMLLSEKLLWQPMRDRRATSTTLIIISIGLSFLLRNAVILIWGSENQTYRLPVI 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V V++ A++ L L+RT + A R + D+ Sbjct: 129 PA-----------LDVGGVKIIYSKVIVMILAVVAIATVHLILQRTKVGKAMRAVADDLD 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + L + ++ G+AG + + + + + VILGG+ Sbjct: 178 LARVSGIDVEWVVLCTWLLAGVLTGVAGGLYG--LITAVRPTMGWFLILPLFASVILGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + I+ E+ M + + + V+L+R Sbjct: 236 GNPYGAIAGALIIGVAQEMSTRMIPAEYKLAVALG-------------MMMAVLLVRPQG 282 Query: 339 LLR 341 L R Sbjct: 283 LFR 285 >gi|256830970|ref|YP_003159698.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256580146|gb|ACU91282.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 301 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 98/305 (32%), Gaps = 16/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + IGAY + L GL + Sbjct: 8 LTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGLTLLVSMGLFDKIGPLP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ MI+ + + ++ + +A Sbjct: 68 AVILLAVMVMILVAIIGAILERVAYRPLRQSPRL--SAVVSALGASIFFQNAIMAIYSPK 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + I + L A++ ++++T I A R +Q Sbjct: 126 FLVYPHDILPKAAVNILGLDIPIMRIIMFSTSLVLMAALYFFIQKTKIGTAIRAAAIDQG 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + F + A G AG +I+ M + + + ILGG+ Sbjct: 186 AAKLMGINVDRVIMLVFCIGPALGGAAGLMVGLYYGQINFSM-GWIFGLKAFTAAILGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + L + + F L L++++R Sbjct: 245 GNIPGAMVGGLLLGVIEALGAAYISIAWKDAIAFC-------------VLILILIVRPTG 291 Query: 339 LLRLR 343 LL R Sbjct: 292 LLGER 296 >gi|170738935|ref|YP_001767590.1| urea ABC transporter permease protein UrtC [Methylobacterium sp. 4-46] gi|168193209|gb|ACA15156.1| urea ABC transporter, permease protein UrtC [Methylobacterium sp. 4-46] Length = 384 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 106/355 (29%), Gaps = 36/355 (10%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N + K + ++ L L + + ++ + L Y A GL I G G+LSL Sbjct: 9 NAFMKPMEWASLAVLAALILVVLPLALDIFRLNLVGKYLTYAFVALGLVICWGYCGILSL 68 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL- 127 + + +G Y + S+ S + +L + L Sbjct: 69 GQGVFFGLGGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQVTALPWFWKPFHSLPLT 128 Query: 128 ----IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT-----------------VRSL 166 + ++I G Y A + + L Sbjct: 129 LLAVVAVPTLFALVISAAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 188 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + + +Y+V G+ +++R+ + +RD + + Sbjct: 189 RTLHGWDIRTDHAKTVLYFVNGGLLIACILAAQYVKRSKLGRILVAMRDKEDRVRFSGYS 248 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + K+ AF +++AF + GA F +SP +I ++ +GG SL Sbjct: 249 VASFKIFAFCLAAAFAAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYTAVGGRLSLFGAVY 308 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 T ++ F SF + V+L + L Sbjct: 309 GTLLVNWAKT--------------SFSESFPELWLFGLGALFIGVVLAFPNGLAG 349 >gi|311106562|ref|YP_003979415.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310761251|gb|ADP16700.1| inner-membrane translocator 39 [Achromobacter xylosoxidans A8] Length = 329 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 66/327 (20%), Positives = 132/327 (40%), Gaps = 26/327 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + A +L + + + + +++ ++V G LG +S + Sbjct: 17 WPVAAAAVAAILMALVPLVVKDAFTLQVLLLAIMFGALGACWNLVGGFLGRISFGHSVFV 76 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +G Y+ ++L L+ L IP+ +IS A ++G P+L+ G Y A+AT+ + +I Sbjct: 77 GVGGYTTLLLLHHLKLTPLLGIPLGGVISAALAWLVGGPTLRLSGHYFAMATIALLQIGL 136 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++I W+ ++ ++ Y++ +G+ FL+ Sbjct: 137 LLMINWEWAGGAVGLEAPIGDAAWMLLFRS---------------KVPYYWIAVGLAFLT 181 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +L + WR I ++ A SL K+ AF +S+ G+ G FFA Sbjct: 182 FCATFFLVHSKTGFYWRAINGDEAASRSLGVPADRYKMLAFVMSAGMTGVWGGFFAMYVG 241 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I P+ MF + ++ V+ + ILGG+ +L A+L+ + E + + Sbjct: 242 FIDPESMFNLTMSVQVVLVTILGGVGTLIGPWLGAAVLLPLSEGTRVL----------WG 291 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340 S + +A+ LV + L+ Sbjct: 292 SSGMGLDLLVFGLAILLVTMFLPGGLV 318 >gi|28971618|dbj|BAC65301.1| membrane spanning protein [Pseudomonas fluorescens] Length = 317 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 132/315 (41%), Gaps = 29/315 (9%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 +L + Q + + +I+I+ + A L++V+G GL++ + IGAY+ IL Sbjct: 25 PWLASIFDQSFYMTFATRIMIFALAATSLNLVLGFGGLVAFGHAGFFGIGAYTIAILMEM 84 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 S W+ P + IS C +I+GL SL+ RG Y + TL +++ I G Sbjct: 85 GTSSAWIAWPAAVAISAGCALIIGLVSLRTRGVYFIMITLSFAQMLYYIFQSLTAF-GGD 143 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 G+ + R + ++ YYV+L + + + Sbjct: 144 DGMSLPGRST-------------LALGPDLSSDVSFYYVVLLISVVVMFAMQRAVNARFG 190 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 ++IR+N+ S+ + KL AF +S A G+AGA A ISP++ ++++ Sbjct: 191 RVLQSIRENESRMESIGYPVFRYKLVAFTLSGALAGLAGALVANQNGFISPNLMLWTQSG 250 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ +VI+GG+ L A+L+ + E ++ + I Sbjct: 251 TLMVMVIMGGVGYLYGGVFGAALLLILEETLSNYTIHW---------------QLPLGII 295 Query: 328 LFLVILMRSHSLLRL 342 L +V+L + L Sbjct: 296 LLVVVLFAQTGIAGL 310 >gi|320528027|ref|ZP_08029193.1| amino acid or sugar ABC transport system, permease protein [Solobacterium moorei F0204] gi|320131653|gb|EFW24217.1| amino acid or sugar ABC transport system, permease protein [Solobacterium moorei F0204] Length = 560 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 30/322 (9%), Positives = 84/322 (26%), Gaps = 12/322 (3%) Query: 10 KYDKILCLLAVVYPLLLFLFL---GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + L ++ V L + + + I ++ Q + A G++ V+ G Sbjct: 233 RNGLYLVIILVFIGLGIVTPIIKKTPLFTVNNILNILQQASPRMFLALGVAGVIMLAG-T 291 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L+ +G + I+ + + + + + L Sbjct: 292 DLSIGRMVGMGMVASTIIMHKGINTG--AVFGKVFDFTNLPIGLRAVMALVVCIILCTIF 349 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 ++ F+ I++ + + + + V P+ + + Sbjct: 350 TSIAGFFKAKYKMHPFISSMSNMLIIFGMVTYATKGVSFGAIENDIPAMIIPKIGNFPTI 409 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 +L + +T + N +A + + AF ++ G Sbjct: 410 ILWAAVAVMIVWFIWNKTTFGKNLYAVGGNPEAAAVSGIDVFRVTIMAFVMAGVLYGFGA 469 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCG 300 + ++ I+ ++ GG+ +S + I + Sbjct: 470 WLECNRMVGSGSAAYGQGWDMDAIAACVVGGVSFSGGIGKISGVVVGVTIFTALTYSLTI 529 Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322 + + T Sbjct: 530 LGIDTNLQFVFEGLIILAAVTL 551 >gi|316934614|ref|YP_004109596.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315602328|gb|ADU44863.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 722 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 23/305 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++ + L + S + + A ++I V G + L+ +A+ Sbjct: 34 LLILVFVGFLLTIPGYTSLPQLQQLMRSFAEQGFVAMAMAISV-LSGGIDLSVGAVFAMA 92 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + + L + L I G + G + +L Sbjct: 93 DFLTLYLLMVREWPLPLAIVAVLAWGALIGAVNGGLIAYAKTRPFLTTM--------VVL 144 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + N G+Y D + + I +F+ V L Sbjct: 145 IILRAAYNKLTGLYAIDLASASSDSEAWDYLGTGYLFGIPINMVFLIVVGLIG------- 197 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L+L R + ++KA + + A+ ++ AG +AA ++ Sbjct: 198 HLYLTRIRSGVHIMAVGSSRKAARHAGIDVKRSLFLAYVLAGMLASFAGILYAARQNTAG 257 Query: 258 PDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 D + ++ +LGG+ ++S+ AI+ ++ + + + Sbjct: 258 TDT-GVGWEVNALAATVLGGISLSGGRGTISRALMGAAIIFLLINGLVQLGTHGSLTTAT 316 Query: 312 FDCSF 316 Sbjct: 317 IGLIL 321 >gi|168490837|ref|ZP_02714980.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae CDC0288-04] gi|183574713|gb|EDT95241.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H) [Streptococcus pneumoniae CDC0288-04] Length = 289 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 65 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGNNVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|83593086|ref|YP_426838.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] gi|83576000|gb|ABC22551.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] Length = 304 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 87/304 (28%), Gaps = 15/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G +G+++ Y IGA+ VI G + +P+ Sbjct: 8 LINGLTLGAIYGLIAIGYTMVYGIIGMINFAHGEIYMIGAFLTVICFVLLGGPEFASVPL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILIKWKPITNGKAGIYVADRLY 157 + ++ M+ I I R+ Sbjct: 68 ALLLILVVSMVFTAAYGWTVERLAYRPLRGSFRLAPLISAIGMSIALQNYVQITQGARVK 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + +R F V ++ + L + +T++ R ++ Sbjct: 128 PIQPVIRGGFEVFNQGGFAVQISYLQIFIWILTIGLMMGFTYVITQTSMGRQQRACEQDR 187 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K + + F + + +AG I F + + +LGG Sbjct: 188 KMASLIGVNVDRTISLTFVIGALLAAVAGLITTLYYGVIDFY-IGFLAGMKAFTAAVLGG 246 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + SL ++ + + + F L LV++ + Sbjct: 247 IGSLPGAMLGGLLIGLIEAFWSAYFTIEYKDVATFG-------------ILVLVLIFKPT 293 Query: 338 SLLR 341 L Sbjct: 294 GFLG 297 >gi|238027294|ref|YP_002911525.1| inner-membrane translocator [Burkholderia glumae BGR1] gi|237876488|gb|ACR28821.1| Inner-membrane translocator [Burkholderia glumae BGR1] Length = 327 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 106/301 (35%), Gaps = 23/301 (7%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 ++ + + A + V+ G S +AIGAY+ G + + V+ Sbjct: 1 MTLVTNLGLLSFLALS-AYVLAIAGDFSFGQQALFAIGAYAGASATVLGGWPLGAALAVA 59 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 A G ++ +L+ G ++A L +E + +L+ + G G + Sbjct: 60 AAAGALAGWLLRAATLRLSGLRFSLAMLAAAETIRQLLLLIRVQRPGPDGEPIGPGGDEG 119 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + R+ + + ++ L + RT AWR + ++ Sbjct: 120 FAGI-------RYVFEHGMTPAQVALMVWAALGLVLVALAGFERTRRGRAWRMVGEDPAL 172 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L AKL+A ++ A + GA +A I PD F I +S ++GG+ Sbjct: 173 AAALGIDARRAKLAAATLAGAVAALGGALYAHCSTYIEPDNFDVMIGIHGLSYALIGGLG 232 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S A+ +G++E + Y + ++++R L Sbjct: 233 SPFGPLLGVALDLGLLEGTRFFHGY---------------RMIAFGGLVAGLLVVRPRGL 277 Query: 340 L 340 + Sbjct: 278 V 278 >gi|319794220|ref|YP_004155860.1| urea ABC transporter permease urtb [Variovorax paradoxus EPS] gi|315596683|gb|ADU37749.1| urea ABC transporter, permease protein UrtB [Variovorax paradoxus EPS] Length = 304 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 87/301 (28%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+I+ G +G++++ IGAYS + +P I Sbjct: 18 LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYSIYLAAQVTERMAPAFMPYYFPI 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + L + +L W + + T Sbjct: 78 AIGLAFVFAFIVGWIVEWVL--IRHLYKRPLDTLLATWGVSLGLQQIFRTFIGPKEVSPT 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + I P + I +VL ++ +++ L ++ R N+ + Sbjct: 136 LPEWIMGSWTPHEGLDIPINGLFVLALTGLVTCGVLIALHKSRWGLRVRATVANRTMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ GMAGA A + + + +V GG SL Sbjct: 196 TGIDTKKTDRLTFAIGCGIAGMAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +L + L+++MR L + Sbjct: 254 GTVVSAFGIAQTQSISEFFMTGSMAKVLTLS-------------LIVLILMMRPQGLFAV 300 Query: 343 R 343 + Sbjct: 301 K 301 >gi|291296497|ref|YP_003507895.1| inner-membrane translocator [Meiothermus ruber DSM 1279] gi|290471456|gb|ADD28875.1| inner-membrane translocator [Meiothermus ruber DSM 1279] Length = 306 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 110/318 (34%), Gaps = 15/318 (4%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + + + + L+ + A GL++V+G + ++L Y IGAY Sbjct: 1 MPPSLFIEQVLNGFQFGLMLFLLAAGLTLVLGIMDTINLAHGSLYMIGAYLTA-TLVGVT 59 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 S WL + + + + GM++ L L+ ++ ++ + I+ + + G Sbjct: 60 GSFWLAVLGAVLGTALIGMLLELSVLRQLYRRDHLSQVLATFALILIINEVVRMIWGSQ- 118 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 L + + + Y F ++ ++ + + RT + Sbjct: 119 --------PLLLSAPEALSGPVEILPGLYYPAFRLVIIGVGLLVALLLFWLVNRTRVGMW 170 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R N++ ++ I F V + +AGAF S I+ Sbjct: 171 LRAGASNREMAQAMGVPIKPLFTLLFGVGAGLCAIAGAFLGPILAV--QIGMGESILILA 228 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVI 326 ++++GG+ S+ ++ V + + + + + L+ + Sbjct: 229 FVVIVIGGIGSIKGALVGALLVGLVDTAGRAFLPLLLSRVAPPEVASNLGPALASILIYL 288 Query: 327 ALFLVILMRSHSLLRLRT 344 + +V+ R L RT Sbjct: 289 LMAVVLFFRPQGLFPART 306 >gi|153814398|ref|ZP_01967066.1| hypothetical protein RUMTOR_00608 [Ruminococcus torques ATCC 27756] gi|317500108|ref|ZP_07958343.1| galactoside ABC transporter [Lachnospiraceae bacterium 8_1_57FAA] gi|145848794|gb|EDK25712.1| hypothetical protein RUMTOR_00608 [Ruminococcus torques ATCC 27756] gi|316898593|gb|EFV20629.1| galactoside ABC transporter [Lachnospiraceae bacterium 8_1_57FAA] Length = 554 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 28/318 (8%), Positives = 86/318 (27%), Gaps = 9/318 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y IL + V+ + + + + ++ Q + A G++ ++ G L+ Sbjct: 231 YIAILLIFIVLCIITPMIKGAPLLTYNNVLNVLQQASPKMFLALGVAGLILLAG-TDLSI 289 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G + I+ + + + + +I+ + L +++ Sbjct: 290 GRMVGMGMTTATIIMHQGINTG--GVFGHIFDFTSTPIIVRVILSLVICILLCTFFTMIA 347 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F I+ + + + + V P+ + +++ Sbjct: 348 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIEPTIPNMIIPKINGFPTIIIWA 407 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + +T + N +A ++ + AF ++ G Sbjct: 408 AAAVFIVWFIWNKTTFGKNLYAVGGNAEAASVSGISVFAVTVGAFILAGILYGFGSWLEC 467 Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304 + + I+ ++ GG+ +S + I + + Sbjct: 468 IRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTYSLTILGID 527 Query: 305 YFNSLLKFDCSFNMRHTT 322 + + Sbjct: 528 TNLQFVFSGIIILVAVAL 545 >gi|83950628|ref|ZP_00959361.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83838527|gb|EAP77823.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 308 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 95/306 (31%), Gaps = 21/306 (6%) Query: 44 IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103 + + + A GLS+V G + ++++ + +GA +L + V+ +++ Sbjct: 16 VTAAVLALTAVGLSLVFGVMRVVNIAHGEFFMLGAVIAYVLTRAISGHPAVGFAVALVVA 75 Query: 104 GACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF-- 158 ++ + + R DY T++ + I+ + ++ G V Sbjct: 76 PVLVGVLAVVADMTILKRLDYDPERTIVATIGLLYIIQQLTLMSYGPDARPVEAPFNTRL 135 Query: 159 -LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + V+ L I + RT I R + ++ Sbjct: 136 ALPWFEWGENGLAMYWPWGLSTTSYKLAVIGAAVVLLCGIWAMMARTRIGLVMRATQADR 195 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + + F + + MA + + ++ +VI+GG Sbjct: 196 DMAQAFGIPVEKVYAMVFGIGAGLAAMAAVLIVPIQQA--HYLMGADPLLLSFIVVIIGG 253 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + SL A ++ + L + + LV++ R Sbjct: 254 LGSLPGTVVAAILIGLSDGIISVFFSPTLAK-------------ILATLLVGLVLVFRPQ 300 Query: 338 SLLRLR 343 L R Sbjct: 301 GLFGTR 306 >gi|111019121|ref|YP_702093.1| ABC branched amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110818651|gb|ABG93935.1| ABC branched amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 372 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 98/326 (30%), Gaps = 29/326 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + S+ + L + + A G+ + G G+L+L + + +GAY + Sbjct: 27 PAVLSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLTLGQGVFFGLGAYMMAMHLKIADAE 86 Query: 92 I---------------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 + L S ++ L L + Sbjct: 87 LRGDTVPDFMQIAGIRELPGYWVPFTSPIVTILGILLIPALVAFVLGLGVFKRRVKGAYF 146 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 I + + A + V + + FF F + + ++++ G+ + Sbjct: 147 AILSQALAAAFAILLVGQQSTGGSNGLNRFRTFFGFNLNDPANKQMLFFIAAGVLLAVVA 206 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 I L + +RD ++ L KL A+ ++ F G+AGA F I Sbjct: 207 ITRQLMNSRYGELLVAVRDQEERVRFLGYDPANIKLVAYVTAAFFAGLAGALFVPIVGII 266 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP +I + V +GG ++L + F SF Sbjct: 267 SPADVGIVPSIAFLIGVAIGGRSTLLGPVLGAIGVAWAQS--------------AFSESF 312 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 T + +V+ + L Sbjct: 313 PSGWTYAQGLLFIVVVGFFPAGVAGL 338 >gi|306839476|ref|ZP_07472284.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. NF 2653] gi|306405421|gb|EFM61692.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. NF 2653] Length = 307 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 101/313 (32%), Gaps = 33/313 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + +GA+ + I Sbjct: 13 VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 72 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L + L++ V+ +++G + + + +A LI + L + +T G Sbjct: 73 LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V L S V V++ L + RT++ A Sbjct: 133 KPVPQLLNGSYELF----------GSGVTISFKQIVVIVVTAILLTIFWYVVNRTSLGRA 182 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + + +AG + + IS F + Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ + L + + F L Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 289 IVLIFMPSGILGR 301 >gi|90423133|ref|YP_531503.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90105147|gb|ABD87184.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 304 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + IY + A G ++V G +G+++ + IG + +I +PV Sbjct: 8 LINGIVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSLGLTFVPV 67 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 +I M + I + + + R+ Sbjct: 68 ILLIVLLVSMAITALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLMNYSQVAQGARVK 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + + V V++ L A + +T + R +Q Sbjct: 128 PVPPIITGGYTLYEADGFVVRLSNIQIIVVITTVVLLAIFTWLVAKTRLGRDMRACEQDQ 187 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 L + F + +A +AG + + M F I + +LGG Sbjct: 188 TMAALLGVDVDRTISMTFVIGAALAAVAGMMYLLYYGLVDFFM-GFVAGIKAFTAAVLGG 246 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + SL ++ + L + + F L +V++ Sbjct: 247 IGSLPGAMLGGLLIGLIETLWSAYFSVEYKDVAAFS-------------ILIIVLIFLPT 293 Query: 338 SLLRL 342 LL Sbjct: 294 GLLGR 298 >gi|22298093|ref|NP_681340.1| branched-chain amino acid ABC transporter permease protein [Thermosynechococcus elongatus BP-1] gi|22294271|dbj|BAC08102.1| branched-chain amino acid ABC transporter permease protein [Thermosynechococcus elongatus BP-1] Length = 314 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 115/306 (37%), Gaps = 31/306 (10%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGLSIW 93 + + + + M A L + + G LSL YAIG Y +L + + Sbjct: 11 LLVSMTLGAMLALSLYLPL-MSGQLSLASPAFYAIGGYIAALLSTRVFAGLNPYPLPLVL 69 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + V+A++ G G +G+P L+ RG Y AIAT+ SE+ + + + + +T G GI+ Sbjct: 70 GEMVVAALVCGLLGWGLGVPVLRLRGIYFAIATIAFSEVLRVLALNLE-VTGGAVGIFGI 128 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + + ++ L + L A I L +T A + I Sbjct: 129 PQPF--------------------STPLGYLWLTLPLLILVAIAIGRLEQTRAGKAMQAI 168 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R ++ +L K+ FA+ + G+AG A + +P F ++ ++ V Sbjct: 169 RGDELVAQTLGIDTTRYKVLGFALGAILAGVAGVLAAHLLNTWNPRQGTFDTGVLALTAV 228 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++GG + + + EL G+ + L + + L Sbjct: 229 LVGGNRTFVGAIAGGMLFTALPELLRGLADQAYL-PPAVANFCRDGRLMLYGLLIILGTR 287 Query: 334 MRSHSL 339 L Sbjct: 288 FFPRGL 293 >gi|54027230|ref|YP_121472.1| putative branched-chain amino acid transporter [Nocardia farcinica IFM 10152] gi|54018738|dbj|BAD60108.1| putative branched-chain amino acid transporter [Nocardia farcinica IFM 10152] Length = 380 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 104/356 (29%), Gaps = 29/356 (8%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ + + L +L + + ++ + L + + A G+ + Sbjct: 1 MTTLIGSWRERSSLTALAGFAVAAILLFAVAPAVLSDFRLNLLAKFLCFAIVAAGIGLAW 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---------------LLIPVSAMISGA 105 G G+L+L + + IGAY + + L S Sbjct: 61 GRGGMLTLGQGVFFGIGAYIMAMHLQMADAARLGNDVPEFMEIAGIRELPTFWQPFASAP 120 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 ++ L L I + + A + + T + Sbjct: 121 VAILAILVLPALVAAVLGYGVFKRRVKGAYFAILSQALAAALAILLTGQQALGGFTGLSD 180 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 FF F S ++++ G + +I+ L + +RD ++ L Sbjct: 181 FRAFFGFKLSDPANRRMLFFLAAGALLVVVAIVRQLMHSRYGELLVAVRDQEERVRFLGY 240 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 K+ A+ V++ F G+AGA F ISP +I + V +GG T+L Sbjct: 241 DPADIKIVAYVVAAFFAGIAGALFTPIVGIISPADIGVVPSIAFLIGVAIGGRTTLLGPV 300 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + F T L + +V+ L Sbjct: 301 LGAIGVAWAQTTLSE--------------QFPSGWTYLQGVLFIVVVGFIPAGLAG 342 >gi|303255835|ref|ZP_07341876.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae BS455] gi|301801597|emb|CBW34295.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae INV200] gi|302597219|gb|EFL64324.1| branched-chain amino acid transport system permease protein [Streptococcus pneumoniae BS455] Length = 289 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 65 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGISFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILGISLILMILLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|158337392|ref|YP_001518567.1| branched-chain amino acid ABC transporter permease [Acaryochloris marina MBIC11017] gi|158307633|gb|ABW29250.1| branched-chain amino acid ABC transporter permease protein [Acaryochloris marina MBIC11017] Length = 478 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 83/271 (30%), Gaps = 4/271 (1%) Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 YV+ W +S I + + + + + + ++ + Sbjct: 211 YVLCLVGVAACWWFSFSLSLTIELPSALQEIVLLMMRFAMVAPLGIVGVILVYASCRQPL 270 Query: 141 KPITNGKAG-IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + + G + V Y+ + ++L+ L + Sbjct: 271 QQLRTQSMGTHLSLLAVSMGMGLVVMFFGVHIMGIIDYTYKAGLLWLLILTIALVFWQLE 330 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + +IR++++ +L + KL +F + A G+AG+F+A I+PD Sbjct: 331 RWVNSPWGRVLTSIREDEEVAKALGKNVFRYKLQSFMLGGAIAGIAGSFYAWQLTFINPD 390 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F I++ GG + I E+ + D Sbjct: 391 GFIPLLTFQAWIIIVAGGAGNNVGTLLGAGIFWAYNEVTRFILPNILPLD---DARLGAF 447 Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 ++ + L ++++ R LL + Sbjct: 448 RVMVIGLMLIVLMMWRPQGLLGKKEELTLGR 478 Score = 43.7 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 Y S+ + IY +F+ GL++ G GL++ + AIGAY+ Sbjct: 5 YFVSLALFTTIYALFSLGLNLQWGYTGLINFGHIAFMAIGAYT 47 >gi|328951562|ref|YP_004368897.1| ABC-type transporter, integral membrane subunit [Marinithermus hydrothermalis DSM 14884] gi|328451886|gb|AEB12787.1| ABC-type transporter, integral membrane subunit [Marinithermus hydrothermalis DSM 14884] Length = 288 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 100/311 (32%), Gaps = 25/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 +Y + A GL++V G L +L + YA+GAY + S Sbjct: 3 WVTFGYLAVDGLAVGSVYALTALGLTLVYGLLRVLHVAHAGVYAVGAYGGWLAYSATEHL 62 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + L + + + G I + +F G Sbjct: 63 GFALAAGALAATLFGLFLEWWFYRPLAGKPPLIPLIGSIGLFL------------ATGDL 110 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + ++ +L V VLLG L + RT + AWR Sbjct: 111 LRILFGPYQQSLPALEPRPVLFLGAVGVTAPQVAVLLGTALLLLGVYGVTARTRLGLAWR 170 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 + + + +L AFA++SA G+AG +++ P M ++ Sbjct: 171 ALAQDLEVASALGIHPPRHTALAFALASALAGVAGVLIGVYYNQVYPTMGDVPAY-KALA 229 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V+LGG+ S+ A +L V L F + +AL +V Sbjct: 230 VVVLGGLGSVWGTVAAGVLLGLVESLALAFLGNAFPPEG------------VAFLALIVV 277 Query: 332 ILMRSHSLLRL 342 +L+R L Sbjct: 278 LLVRPQGLFGR 288 >gi|291454670|ref|ZP_06594060.1| branched-chain amino acid ABC transporter permease [Streptomyces albus J1074] gi|291357619|gb|EFE84521.1| branched-chain amino acid ABC transporter permease [Streptomyces albus J1074] Length = 364 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 95/343 (27%), Gaps = 29/343 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L A +L + + + + L + A G+ + G GLL+L + + + Sbjct: 11 LAAFALGAVLLFAVAPLALTDFRLGLLAKYLCTAIVAVGVCLAWGRGGLLTLGQGVFFGL 70 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS------ 130 G Y+ + L + + LA L+ Sbjct: 71 GGYAMAMHLKLADAGPGNLPDFMVLYGTTDTLPWWWVPFANPVFALAATVLLPMGVAALL 130 Query: 131 ---------EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L+ + + + FF + + Sbjct: 131 GSLIFRRRVRGAYFALLSQALTAAFAIWLVGQQATTGGTNGLTDIQGFFGYALDDPANQR 190 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +Y+V+ + ++ L + +RD+++ L KL + V++ Sbjct: 191 MVYFVIALVLLALIALARQLIHSRYGELLVAVRDSEERVRFLGYDPARVKLVVYVVAAGM 250 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA F + ISP + +I ++ +GG SL + Sbjct: 251 AGLAGALFVPAVGIISPALIGIVPSIELVIGAAVGGRASLLGAVLGALAVAWAKTALSE- 309 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 F T + +V+ L L Sbjct: 310 -------------EFPAAWTYFQGLLFVVVVAFLPGGLASLAR 339 >gi|315426866|dbj|BAJ48487.1| branched-chain amino acid ABC transporter permease [Candidatus Caldiarchaeum subterraneum] Length = 321 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 104/306 (33%), Gaps = 12/306 (3%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ + L +Y + IL+Y ++ G G L L + +GA Sbjct: 6 ALGAVIALAAVPFLVGLNEYYLFLVTLILLYTTIVVAWQLIGGYGGQLDLGAGAYHGLGA 65 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 L YG+S W+ + VS + ++G PS + + A ++ + I Sbjct: 66 VITGFLMVNYGVSGWVGLLVSGAAAAGVAFLIGYPSFRLGLKEVWYALSSLALVLILQKI 125 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 F +R +IF YY+ + + I+ Sbjct: 126 FLLWTDVAGPLERYIPYAEFDPLFMR------------AGTKIFYYYITAALLAATFLIV 173 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 +RR+ +IR+N++A L + KL A + S + G +A+ P Sbjct: 174 SRIRRSKTGLYLISIRENEEAAEMLGVDVRRYKLQALMIYSFIAAVTGGIYASMVGFYHP 233 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +F +I ++ I+GG+ L + IL+ V E L + + Sbjct: 234 TLFDSWISIQTATLAIVGGLGHLLGPPIVSIILLTVQEYLRITLGAVIIGLHQVIFGIIL 293 Query: 319 RHTTLM 324 + Sbjct: 294 VIIIMF 299 >gi|152988923|ref|YP_001349657.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa PA7] gi|150964081|gb|ABR86106.1| branched-chain amino acid transport protein BraD [Pseudomonas aeruginosa PA7] Length = 307 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 11 LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIAFIAITLLAMMGLDSVPL 70 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + +I+ I I + + Sbjct: 71 MMLAAFVASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + T + F + V+ + + + + L++ R+ + A R ++ Sbjct: 131 AIPTLLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A I+ F I + +LGG Sbjct: 191 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L + + ++ F L LV+L R Sbjct: 250 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 296 Query: 338 SLLRL 342 +L Sbjct: 297 GILGR 301 >gi|313672660|ref|YP_004050771.1| amino acid/amide abc transporter membrane protein 1, haat family [Calditerrivibrio nitroreducens DSM 19672] gi|312939416|gb|ADR18608.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Calditerrivibrio nitroreducens DSM 19672] Length = 285 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 90/290 (31%), Gaps = 24/290 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G + L++ + +GA+ +++ + G + L+I Sbjct: 9 IINGITVGSIYSLVALGYTMVYGIIKLINFAHGDIFMVGAFIGLLVSIKLGANFILVIFF 68 Query: 99 SAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++ G+++ + + I+ LI + + + NG Sbjct: 69 AMILTSFIGVLVEKIAYNPLRNRNSARISALISAIGVSIFISNLVVLINGPQNESYP--- 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + I +++ L + + T I A R + N Sbjct: 126 ------------------ALLPNNILQPLIIVISIGLMYGLYYIVHNTKIGIAMRAVSYN 167 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + FA+ S G AG + P M + +LG Sbjct: 168 VNTARLMGINPDLVISFTFAIGSFLAGAAGVLVGTYYRAVDPFM-GMMFGLKAFVAAVLG 226 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 G+ S+ IL L F + F + + Sbjct: 227 GIGSIPGAMVGGLILGLTEVLGVAFISSSFRDAIAFGILILILIIKPAGL 276 >gi|266625288|ref|ZP_06118223.1| galactoside ABC transporter, permease protein MglC [Clostridium hathewayi DSM 13479] gi|288862812|gb|EFC95110.1| galactoside ABC transporter, permease protein MglC [Clostridium hathewayi DSM 13479] Length = 553 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 28/298 (9%), Positives = 77/298 (25%), Gaps = 9/298 (3%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + + ++ Q + A G++ ++ G L+ +G + I+ + Sbjct: 250 VPLLTYNNVLNILQQASPRMFLALGVAGLILLTG-TDLSIGRMVGMGMTTATIIMHQGVN 308 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + V G+ + L + F I+ + Sbjct: 309 TGMVFGHVFDFTGLPIGVRVIFALFM--CIVLCTCFTAIGGFFTARFKMHPFISTMANML 366 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + + V P + ++L + +T Sbjct: 367 VIFGLVTYATKGVSFGAIDPSIPKMIIPRLNGFPTIILWAIAAIVIVWFIWNKTTFGKNL 426 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 + N +A ++ + + AF ++ G A + + I Sbjct: 427 YAVGGNPEAASVSGISVFWVTMGAFILAGILYGFGSWLECARMVGSGSAAYGQGWEMDAI 486 Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + ++ GG+ +S + I ++ + + T Sbjct: 487 AACVVGGVSFTGGIGKISGVVVGVLIFTVLIYSLTILGIDTNLQFVFEGIIIITAVTL 544 >gi|125718527|ref|YP_001035660.1| branched-chain amino acid ABC transporter permease [Streptococcus sanguinis SK36] gi|125498444|gb|ABN45110.1| ABC transporter membrane-spanning permease-branched chain amino acid transport, putative [Streptococcus sanguinis SK36] gi|324991355|gb|EGC23288.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] gi|324993708|gb|EGC25627.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] gi|324994979|gb|EGC26892.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|325687065|gb|EGD29088.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] gi|325690654|gb|EGD32655.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] gi|325694983|gb|EGD36887.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] gi|327462072|gb|EGF08401.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] gi|332358288|gb|EGJ36114.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK355] gi|332359073|gb|EGJ36894.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK49] gi|332362299|gb|EGJ40099.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1056] gi|332367222|gb|EGJ44957.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1059] Length = 289 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 108/303 (35%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y IGA+ L + + +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMIGAFMGYYLINILKFNFFLSLIL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + + IA LI + +L G Sbjct: 65 AMIGTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFLLEYGMIFFVGANTRS------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I+ RF + +L FL ++ +++T + A R + + Sbjct: 118 ----FPQVIKTVRFNLGPISISNIQLLILGISIFLMVALQFIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + I +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGIKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + + ++ L +++L+R Sbjct: 233 GIIPGAALGGFVIGLLETFATALG-------------LSDFRDAIVYAILIVILLIRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|126463708|ref|YP_001044822.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] gi|126105372|gb|ABN78050.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] Length = 310 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 112/320 (35%), Gaps = 28/320 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +LA+ +L + Y + +IL+ +A G +I G GLLSL + +A Sbjct: 3 MLALHLAVLAGIAALQFVLPAYHHTNAARILVLATYAIGFNIAFGYTGLLSLGHALFFAG 62 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y+ +L + G W + + G +GL +L+ G I TL+ ++ F Sbjct: 63 GMYATGLLVDQGGWQPWAALLAGPVAGGVLAAGVGLLALRTAGPAFMIVTLMFAQAFHLA 122 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ W T G G R + Y + + Sbjct: 123 ILYWGRFTGGDEG-------------FTLSGAARRIGPFDLADPTTRYGAAFLLFAAALL 169 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L L R+ +R+N++ L KL A A+S G AGA + + Sbjct: 170 GCLALVRSRTGRVLIAVRENEERTRMLGYDTFRTKLLALALSGLLSGAAGATYGLMFGYV 229 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +I+ + V+LGG ++ TA+L +++ + Sbjct: 230 GGSFAAIQYSILPLIWVLLGGAGTVLGPLLGTALLFYLIDWASSI--------------- 274 Query: 317 NMRHTTLMVIALFLVILMRS 336 ++ L L++L Sbjct: 275 TTASQFVVGAVLILLVLFAP 294 >gi|322411203|gb|EFY02111.1| branched-chain amino acid transport system permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 289 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 105/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + L+ +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLYMMGAFIGYYLINALQLNFFLALIL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G L Sbjct: 65 TMVFTACLGVLIEFLAYRPLRQSTRIAALITAIGVSFLLEYGMVYFVGAEARAFPQALKV 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +LL L ++ +++T + A R + + Sbjct: 125 VKYH-----------LGPISVTNVQLIILLVSLTLMLALQFIVKQTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I FA+ SA G AG + I+P M + + +LGG+ Sbjct: 174 AAQLMGININSIISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGLKAFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A I+ + + ++ + L +++L+R Sbjct: 233 GIIPGAAFGGFIIGLLET-------------FSTAIGLSSYRDAVVYVVLIMILLVRPAG 279 Query: 339 LLR 341 LL Sbjct: 280 LLG 282 >gi|311103877|ref|YP_003976730.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310758566|gb|ADP14015.1| inner-membrane translocator 12 [Achromobacter xylosoxidans A8] Length = 309 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 115/319 (36%), Gaps = 26/319 (8%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L ++ + +Y +FA G +++ G LG+++L + +GAY+ + + Sbjct: 8 ALTALESPIMFEQQFVNALSLGCVYALFALGFTLIFGVLGVINLAHGAVFMVGAYAALFV 67 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKP 142 ++ L +W + + ++G G+I+ + + + +I + IL Sbjct: 68 VQQFSLPLWAGLMAAFFVAGFTGVIIDYLVLKPLRKRNAPHLIPMIATIGVGIILNNGAQ 127 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 G + + + + + + ++ L A ++ +R Sbjct: 128 SIFGASNLRFPH----------GTVPEEVIEVAGLHLTVIELGIIFLSFALMAVLMYVMR 177 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 RT A R I ++ KA + L + ++ ++A G+AG + + P M + Sbjct: 178 RTQFGRALRAIAESPKAAWLLGINVEKLFVTTSFAAAALGGVAGVLIGLYSNALFPLMGQ 237 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + +++ILGGM + L L + F Sbjct: 238 PMLHKGI-AVIILGGMGDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG--------- 287 Query: 323 LMVIALFLVILMRSHSLLR 341 LFL++L+R L Sbjct: 288 ----LLFLILLVRPQGLFG 302 >gi|257388572|ref|YP_003178345.1| inner-membrane translocator [Halomicrobium mukohataei DSM 12286] gi|257170879|gb|ACV48638.1| inner-membrane translocator [Halomicrobium mukohataei DSM 12286] Length = 398 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 110/343 (32%), Gaps = 40/343 (11%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------RYGLSIW 93 + +L + +FA + G G LS Y GAY+ +++ + Sbjct: 35 METMVAVLYFSLFAMSFDFISGYTGYLSFGHAAFYGTGAYTVLLIANGKVPLLGPETPFL 94 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + V A+++ +++GL S + G Y A+ TL +++ + W + + Sbjct: 95 VALVVGAVLATVLAVVIGLVSFRLTGVYFAMITLGFAQVLYVFVRDWDYVGSNPRDGIAL 154 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFM-----------YYVLLGMCFLSASIILWLR 202 V + + + + + +Y + + L + + + Sbjct: 155 SGARGFELGVPYVDQLTVSLGTLTGDTLALAGHTLGTTTVSFYAVGVVVLLCFAAMQRIL 214 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-F 261 + IR+N+ ++ KL AFA+S F G+AG A + ++P+ F Sbjct: 215 HSPFGRVMVAIRENEDRAEAIGYDTFRYKLGAFAISGFFGGVAGGLLAGFKRSVTPESGF 274 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAI----------------------LIGVVELCC 299 F + + I+GG +L+ E Sbjct: 275 YFLTSGDALLASIIGGFGTLAGPLWGHLFDETVREFLSNRGQGGGLLPYLEQTLSEEFLT 334 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + N + + I L +L ++ Sbjct: 335 TELVGGLTVEGFITAALNGHASLYVGIVFVLFVLYVPDGIVGT 377 >gi|158321522|ref|YP_001514029.1| inner-membrane translocator [Alkaliphilus oremlandii OhILAs] gi|158141721|gb|ABW20033.1| inner-membrane translocator [Alkaliphilus oremlandii OhILAs] Length = 291 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 90/305 (29%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ + + Y + + + ++ V Sbjct: 4 LTNGISLGSLYALIAIGYTMVYGILRLINFAHGEIFMMSLYFAFYGVAMFAMPWYIAFIV 63 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+ GM++ + K D I ++ + + + G Sbjct: 64 TILITAVLGMLVERAAYKSLRDAPRITIMVSAIGASFFIQNLAIVLFGG----------R 113 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + V + + + L ++ + +T A R + + + Sbjct: 114 PKTVPTVEVLSGVIKLGSVSLQRLTLVIPVVTILLLFLLMFLVNQTKTGMAMRAVSKDYE 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + SA + G + A +I P + I +LGG+ Sbjct: 174 TARLMGIDVNKIITITFGIGSALAAIGGIMWGAKFPKIDPFV-GTMPGIKCFIAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ IL + F + + Sbjct: 233 GNIPGAVIGGFILGIGEIMLIAFLPSLTGYRDAFAFILLIIILL-----------FKPTG 281 Query: 339 LLRLR 343 ++ + Sbjct: 282 IMGEK 286 >gi|114707717|ref|ZP_01440612.1| inner-membrane translocator [Fulvimarina pelagi HTCC2506] gi|114536961|gb|EAU40090.1| inner-membrane translocator [Fulvimarina pelagi HTCC2506] Length = 305 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 99/312 (31%), Gaps = 28/312 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90 + + IY + A G ++V G +G+++ + IGA+ + + L Sbjct: 8 LINGITLGSIYGLIAIGYTMVYGIIGMINFAHGEIFMIGAFIALTTFLALAALGITFLPL 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ V+ + G + + + +A LI + L + +T G Sbjct: 68 VLLIILAVAMFFTAVWGWTIERVAYRPLRGSFRLAPLITAIGMSIFLQNFVQVTQGARVK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + ++ + V +++ L + L + +T++ Sbjct: 128 PLPPQIQ------GGITLMDGPGGIVVQLSFMQIIIIVTTIVLMTAFSLLIGKTSLGRQQ 181 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++K L + F + ++ +AG + I F + Sbjct: 182 RACEQDRKMAALLGVNVDRTISLTFVMGASLAAVAGLMYLLYYGVIDFY-IGFIAGVKAF 240 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL + + G + + F L + Sbjct: 241 TAAVLGGIGSLPGAMLGGLAIGLIETFWSGYFSVEYKDVAAFS-------------ILAI 287 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 288 VLIFLPSGLLGR 299 >gi|77406656|ref|ZP_00783699.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77174728|gb|EAO77554.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 266 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 25/284 (8%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 +V G + L++ Y +GA+ L + L+ +L + ++ + S G ++ + + Sbjct: 1 MVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLIAMLGSAFLGAVIEYLAYRP 60 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 IA LI + +L G I ++ + Sbjct: 61 LRKSTRIAALITAIGVSFLLEYGMVYLVGAD-----------TRAFPQAIHTVKYNLGPI 109 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +L L ++ ++T + A R + + A + + FA+ Sbjct: 110 TITNVQLIILGIALLLMLTLQFIXQKTKMGKAMRALSVDSDAAQLMGINVNRTISFTFAL 169 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 SA G G + + P M + + +LGG+ + A ++ + L Sbjct: 170 GSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGIGIIPGAAIGGFVIGILETL 228 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + ++ L L+ L+R +L Sbjct: 229 ATALG-------------VSDFRDGIVYAILILIFLIRPAGILG 259 >gi|317404588|gb|EFV84993.1| inner-membrane translocator [Achromobacter xylosoxidans C54] Length = 300 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 99/307 (32%), Gaps = 17/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I ++ A GL++V G +G++++ A+GAY+ ++ + + V Sbjct: 10 LFNGISLFSILLLMAIGLAVVFGLMGVINMAHGELMAMGAYTTYLVSVAFQHWAPGWMDV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ ++ + +L W + Sbjct: 70 YLFVAIPLAFLVTSAFGYLLERGF--IRWFYNRPLDTLLATWGLSLILQQAYRSIFGAQE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + S + P+ + + + ++L ++ + L L R+A R + N+ Sbjct: 128 VSVPLASWLSGAWEPTPDLQFPLNRIFILGLTLLVALGVYLLLYRSAWGLRVRAVTQNRA 187 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ FA+ S G+AG F + + +V+ GG+ Sbjct: 188 MAGAVGINTRRVDALTFALGSGLAGIAGCVFTMIGS--TNPGTGQLYIVDSFIVVVFGGV 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A + + + + +++ + V+ R + Sbjct: 246 QSLLGTAFSGLAIAQSQTTLEYLMSGSMAKVT-------------ILVLVIAVLYFRPNG 292 Query: 339 LLRLRTP 345 L +T Sbjct: 293 LFATKTR 299 >gi|294853796|ref|ZP_06794468.1| predicted protein [Brucella sp. NVSL 07-0026] gi|294819451|gb|EFG36451.1| predicted protein [Brucella sp. NVSL 07-0026] Length = 308 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 92/294 (31%), Gaps = 27/294 (9%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 32 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 91 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 +I L A + + +I + G + Sbjct: 92 LIQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 140 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + A R + ++ A + + Sbjct: 141 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 200 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 201 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 258 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + + + ++ L+++++ L Sbjct: 259 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 299 >gi|239982825|ref|ZP_04705349.1| branched-chain amino acid ABC transporter permease protein [Streptomyces albus J1074] Length = 384 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 95/343 (27%), Gaps = 29/343 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L A +L + + + + L + A G+ + G GLL+L + + + Sbjct: 31 LAAFALGAVLLFAVAPLALTDFRLGLLAKYLCTAIVAVGVCLAWGRGGLLTLGQGVFFGL 90 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS------ 130 G Y+ + L + + LA L+ Sbjct: 91 GGYAMAMHLKLADAGPGNLPDFMVLYGTTDTLPWWWVPFANPVFALAATVLLPMGVAALL 150 Query: 131 ---------EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L+ + + + FF + + Sbjct: 151 GSLIFRRRVRGAYFALLSQALTAAFAIWLVGQQATTGGTNGLTDIQGFFGYALDDPANQR 210 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +Y+V+ + ++ L + +RD+++ L KL + V++ Sbjct: 211 MVYFVIALVLLALIALARQLIHSRYGELLVAVRDSEERVRFLGYDPARVKLVVYVVAAGM 270 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AGA F + ISP + +I ++ +GG SL + Sbjct: 271 AGLAGALFVPAVGIISPALIGIVPSIELVIGAAVGGRASLLGAVLGALAVAWAKTALSE- 329 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 F T + +V+ L L Sbjct: 330 -------------EFPAAWTYFQGLLFVVVVAFLPGGLASLAR 359 >gi|33598453|ref|NP_886096.1| branched chain amino acid ABC transporter permease [Bordetella parapertussis 12822] gi|33574582|emb|CAE39230.1| probable branched-chain amino acid transport system, permease component [Bordetella parapertussis] Length = 321 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 122/279 (43%), Gaps = 15/279 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 F + + S ++LIY + A L++++G G+++L + GAY+ ILG+ Sbjct: 18 FPLVAPALGLDFYISFVRRVLIYALAATSLNLILGYGGMVALGHAAFFGAGAYAVGILGA 77 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 S L P + ++GA I G SL+ RG Y + TL +++ + I + Sbjct: 78 AGITSALLAWPAAIALAGALAWITGAISLRTRGVYFIMITLAFAQMVYYVFISLRQYGG- 136 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +L + P + ++ YY++L + + + + + Sbjct: 137 --------------EDGLNLSGYSTLPGLDLANDLTFYYLVLVLFAVLMGVFGRVVDSRF 182 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A + IR+N+ SL + KL+AF +S A G+AGA A ISP + ++++ Sbjct: 183 GAALQGIRENESRMESLGYPVYRLKLTAFVISGAAAGLAGALLANHNLFISPSLMHWTQS 242 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 ++ +V++GG+ +++ + E+ Y+ Sbjct: 243 ANLLIMVLVGGIGLRYGGVAGAVVMLVLEEVLRQWTEYW 281 >gi|170741680|ref|YP_001770335.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168195954|gb|ACA17901.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 332 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 117/326 (35%), Gaps = 32/326 (9%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + L+ ++++ Y +FA ++++G GL+S Y Sbjct: 7 LFAALVAAALAVPFVPHLIYPVFVMKVMCYGLFACAFNLLLGFTGLVSFAHAAFLGTAGY 66 Query: 80 SYV---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 I + L + + + G+++G +++ RG A+ TL +S++ + Sbjct: 67 VTGALMIRLGSHPLGMPAAFLAGVLAAALAGLVIGGLAIRRRGISFAMITLALSQVVSFL 126 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ + T G+ G+ R F + + MYY+ L + Sbjct: 127 AVQLRW-TGGEDGLQGIPRGS-------------LFGLVALSSDTAMYYLTLALFAAGFL 172 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + + + +RDN+ SL KL AF +S+A G AGA A + Sbjct: 173 FVYRVVHSPFGRILQAVRDNEARATSLGYETDRFKLIAFVLSAAVAGAAGALKALVFQLV 232 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 S + + V+ + +LGG+ +L A+++G+ + Sbjct: 233 SLNDVSLHTSTEVVLMTLLGGVGTLFGPLVGAALVVGLQNYLATLGDLV----------- 281 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 T ++ + L + ++ Sbjct: 282 ----TVVIGLIFILCVSFFRRGVVGE 303 >gi|91786888|ref|YP_547840.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91696113|gb|ABE42942.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 349 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 113/302 (37%), Gaps = 15/302 (4%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 F+ Q++ + +I+IY + A L+I +G GL+S + +G Y+ + Sbjct: 25 VPFVAQATDQQFYVAFFARIIIYAIAACALNIALGYGGLVSFGHSLFLGLGGYAVGLASF 84 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + W+ + ++ + G ++ G SL+ G + TL +++ + + G Sbjct: 85 YGVGNGWVHLALTLGVCGLVALVTGAISLRTTGIAFIMITLAFAQMGYFLFVSL-KHYGG 143 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G+ +A F + S + ++ I + LR Sbjct: 144 DDGMPIAQTSRFGPLDLSSATNVYVVAFVVLVLSI--------------WWLARLRVAPF 189 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R + N + + ++ +L A+ +S G+AG A SP ++ + Sbjct: 190 GMVIRGAKQNARRVNAAGIPVLRYQLLAYVMSGMLCGVAGLLLANLNAFASPSTLAWAVS 249 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 +I IV++GG+ ++ + +G+ E+ G ++ + ++ Sbjct: 250 GELIVIVVIGGLGTVFGPLMGALVFLGLEEILKGFTDHWMVIFGPLIVIVALLGKRGIIG 309 Query: 327 AL 328 L Sbjct: 310 LL 311 >gi|322391652|ref|ZP_08065120.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] gi|321145463|gb|EFX40856.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] Length = 289 Score = 73.7 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 105/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + L+ ++ + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYFLINSLQLNFFVALIL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + S G+++ + + I+ LI + +L G Sbjct: 65 SMIGSAILGVVIEFLAYRPLRHSTRISVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + L +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNIQLLILGVSLVLMVLLQLIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVFGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|15902704|ref|NP_358254.1| branched chain amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|15458246|gb|AAK99464.1| ABC transporter membrane-spanning permease - branched chain amino acid transport [Streptococcus pneumoniae R6] Length = 292 Score = 73.7 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 8 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 68 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 118 -TRAFPQAIQTVRYDLGPISLTNVQLMILGISLILMILLQVIVQKTKMGKAMRAVSVDSD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|239909194|ref|YP_002955936.1| branched-chain amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239799061|dbj|BAH78050.1| branched-chain amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 305 Score = 73.7 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 88/304 (28%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ +A G Y VIL S + Sbjct: 8 LINGLTLGGVYALVALGYTMVYGIIQLINFAHGEIFAAGGYLGVILLSYMASQGLMDSHP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ A + MG ++ + ++L+ ++ + + + Sbjct: 68 WFGLAFALILAMGYCAMLAMAVEKVAYKPLRQSSRLSVLLSALGMSIFLQNGLMLTQGVY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F V +LL L + + RT I A R ++ Sbjct: 128 DKAYPTEFTHG-GFEWLGVRVSFMQIGILLVTTLLLVLLNTLVFRTRIGKAMRATAQDKV 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ +A AG + F I + +LGG+ Sbjct: 187 MSALVGIHSDKVISTTFAIGAALAAAAGIMVGLYYGSV-RYDMGFVPGIKAFAAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ I+ V L + L V+ Sbjct: 246 GNITGAMIGGLIIGMVEILAAAYIPAG-----------GEYKDVFAFVILIGVLYFMPTG 294 Query: 339 LLRL 342 ++ Sbjct: 295 IMGE 298 >gi|17988411|ref|NP_541044.1| high-affinity branched-chain amino acid transport system permease protein LIVM [Brucella melitensis bv. 1 str. 16M] gi|256042954|ref|ZP_05445900.1| high-affinity branched-chain amino acid transport system permease protein LIVM [Brucella melitensis bv. 1 str. Rev.1] gi|260564188|ref|ZP_05834673.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1 str. 16M] gi|265989387|ref|ZP_06101944.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1] gi|17984193|gb|AAL53308.1| high-affinity branched-chain amino acid transport system permease protein livm [Brucella melitensis bv. 1 str. 16M] gi|260151831|gb|EEW86924.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1 str. 16M] gi|263000056|gb|EEZ12746.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1] Length = 406 Score = 73.7 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 108/311 (34%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGHAGMLSFGHAAYFGLGSFAAVHVMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +YY+ L S ++ L T Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + L LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLILVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|226361261|ref|YP_002779039.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226239746|dbj|BAH50094.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 372 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 97/326 (29%), Gaps = 29/326 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + S+ + L + + A G+ + G G+L+L + + +GAY + Sbjct: 27 PAVLSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLTLGQGVFFGLGAYMMAMHLKIADAD 86 Query: 92 I---------------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 L S ++ L L + Sbjct: 87 FRGDTVPDFMQIAGIRELPGYWVPFTSPILTILGILLVPALVAFVLGLGVFKRRVKGAYF 146 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 I + + A + V + + FF F + + ++++ G+ + Sbjct: 147 AILSQALAAAFAILLVGQQSTGGSNGLNRFRTFFGFNLNDPANKQMLFFIAAGVLLAVVA 206 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L + +RD ++ L KL A+ ++ F G+AGA F I Sbjct: 207 VTRQLMNSRYGELLVAVRDQEERVRFLGYDPANIKLVAYVTAAFFAGLAGALFVPIVGII 266 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP +I + V +GG ++L + F SF Sbjct: 267 SPADVGIVPSIAFLIGVAIGGRSTLLGPVLGAIGVAWAQS--------------AFSESF 312 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 T + +V+ + L Sbjct: 313 PSGWTYAQGLLFIVVVGFFPAGVAGL 338 >gi|220910261|ref|YP_002485572.1| inner-membrane translocator [Cyanothece sp. PCC 7425] gi|219866872|gb|ACL47211.1| inner-membrane translocator [Cyanothece sp. PCC 7425] Length = 316 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 115/288 (39%), Gaps = 31/288 (10%) Query: 62 SLGLLSLNCVIAYAIGAYSYVILGS---------RYGLSIWLLIPVSAMISGACGMIMGL 112 G LSL YA+G Y +L + + + ++A++SGA G+++G+ Sbjct: 30 MAGQLSLASPGFYALGGYIAAVLSTKVFPSQGPHFPIPFLLAEMALAAIVSGALGIVVGI 89 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 P+L+ RG YLAIAT+ EI + + + + IT G GI+ + + Sbjct: 90 PALRLRGIYLAIATIAFVEILRVLALNLE-ITGGAVGIFGIPQPF--------------- 133 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 I ++ + + +S ++ L R + A+ IR+++ A ++ + K+ Sbjct: 134 -----TTPIEYLWIAVPLLLISMVLLYRLERIRVGRAFTAIREDELAADAMGINPTYYKV 188 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 AF + + G+ GA A + + F II ++ V++GG + + Sbjct: 189 LAFTLGAILAGVVGAVSAHFLNTWNARQGTFDAGIIYLTSVLIGGTRTFVGPVLGGMVFT 248 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + E+ + F + + + L + L+ Sbjct: 249 ALPEVLRAVAE-LPGLPQWFAQFLRDGRLMVFGVLIVLGTIFFPQGLV 295 >gi|46579126|ref|YP_009934.1| branched-chain amino acid ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603296|ref|YP_967696.1| inner-membrane translocator [Desulfovibrio vulgaris DP4] gi|46448539|gb|AAS95193.1| branched-chain amino acid ABC transporter, permease protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563525|gb|ABM29269.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Desulfovibrio vulgaris DP4] gi|311232967|gb|ADP85821.1| inner-membrane translocator [Desulfovibrio vulgaris RCH1] Length = 301 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 85/289 (29%), Gaps = 3/289 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + IGAY + + GLS + V Sbjct: 8 LTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGFTVFAALGLSGHVSGAV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ M + S + + ++ + + Sbjct: 68 AVLLVTTMVMGLVALIGYLLERVAYRPLRSSSRL--SAVVSALGASIFFQNAVMLIYGAK 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + L + ++ RT A R + +Q Sbjct: 126 FQVYPNDIRPTMAVSFFGMDIPLVRIMMFGASVALMLLLHFFIHRTRTGTAIRAVAIDQG 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + A G AG +I M + + + ILGG+ Sbjct: 186 AAKLMGIDVNRVIALVFMIGPALGGAAGVMVGLYYGQIDFTM-GWVYGLKAFTAAILGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ +L + L + + F + + Sbjct: 245 GNIPGAMVGGLLLGVIEALGAAYISIAWKDAIAFLVLILILIIRPTGLL 293 >gi|229488881|ref|ZP_04382747.1| branched-chain amino acid transport system permease protein LivH [Rhodococcus erythropolis SK121] gi|229324385|gb|EEN90140.1| branched-chain amino acid transport system permease protein LivH [Rhodococcus erythropolis SK121] Length = 298 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 19/306 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S IY + A L +V + G ++ + L + + Sbjct: 8 LISGLTNGSIYAILALALVVVFRATGTINFAQGELALFTTFVAWWLTTMSWPIWAAIGAA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+ ++ L + ++ +F + + + I + Sbjct: 68 LALGFLLGALMERLLIRPVQRRSDMAVLIVALGLFTGLNSLAGMLWGSETKIMPSPFPNG 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + VL+ + L + L R+T + R + DN + Sbjct: 128 PTDYIS---------VGGARVYGDALGVLVALVVLLVLMSLLFRKTRVGLHMRAVADNAE 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + V++A +AG + F I + + GG+ Sbjct: 179 SATLAGVPTSRILAIGWGVAAAIGALAGVLVTPLSPQQLGLTTMFPIFIAASAAALFGGL 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + + + G SL + + + +++ +R + Sbjct: 239 DSLVGAVVGGLTIGVLESMLSGYISVIGGSLQQTSAL----------LIIVVILFVRPNG 288 Query: 339 LLRLRT 344 L + Sbjct: 289 LFGTKK 294 >gi|66045444|ref|YP_235285.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] gi|63256151|gb|AAY37247.1| inner-membrane translocator [Pseudomonas syringae pv. syringae B728a] Length = 300 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 92/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+IV G +G++++ A+G+Y + + L+ +I Sbjct: 14 FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYMTYVTSVVFQRYFPELMDWYFII 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + + +L W + + Sbjct: 74 GIGMAFVVTFAFGLLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ S + + +++ ++A++ L+L R+ R + N+ + Sbjct: 132 TVQWLQGAWKISDGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AG+ F + + + +V+ GG+ SL Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + +++ R + L Sbjct: 250 GTFLSAFAIGQTQVSLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296 Query: 343 R 343 + Sbjct: 297 K 297 >gi|159042945|ref|YP_001531739.1| ribose transport system permease rbsC [Dinoroseobacter shibae DFL 12] gi|157910705|gb|ABV92138.1| ribose transport system permease protein rbsC [Dinoroseobacter shibae DFL 12] Length = 357 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 92/313 (29%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + L S + + Q+ I + A S+V+ + G + L+ Sbjct: 49 LIVLVAAIAVFGLLLGSKFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIM 107 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYGL + + + + G I G K + + + + Sbjct: 108 VMSSVVMGQFTFRYGLPVEVAVACGLLCGTLLGFINGWLVAKVKLPPFIVTLGMWQIVLA 167 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + T I L F ++ I + Y ++ M L Sbjct: 168 ANFLYSRNETIRSQDIRDQAPLLQF------------FGTTLEIGGARLTYGVIFMVLLV 215 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + LR TA + D+ +A + +S + +S AG Sbjct: 216 IVLAYALRHTAWGRHVYAVGDDPEAAELSGVQVSRTLISVYMLSGLICAFAGWALIGRIG 275 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP + + + ++VI GG S+ I+ + + Sbjct: 276 SVSPTSGQLANIESITAVVIGGISLFGGRGSILGAFFGALIVGVFTLGLRLLGADAQWTF 335 Query: 310 LKFDCSFNMRHTT 322 L Sbjct: 336 LLIGLLIIAAVAV 348 >gi|323351067|ref|ZP_08086724.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322122791|gb|EFX94500.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|325696300|gb|EGD38191.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] gi|327462978|gb|EGF09299.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] gi|327470484|gb|EGF15940.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] gi|327474581|gb|EGF19986.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] gi|327490139|gb|EGF21927.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] gi|328946908|gb|EGG41045.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 289 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 108/303 (35%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y IGA+ L + + +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMIGAFMGYYLINILKFNFFLSLIL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + + IA LI + +L G Sbjct: 65 AMIGTAILGVLIEFLAYRPLRNSTRIAALITAIGVSFLLEYGMIFFVGANTRS------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I+ RF + +L FL ++ +++T + A R + + Sbjct: 118 ----FPQVIKTVRFNLGPISISNIQLLILGISIFLMVALQFIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + I +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGIKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + + ++ L +++L+R Sbjct: 233 GIIPGAALGGFVIGLLETFATALG-------------LSDFRDAIVYAILIVILLIRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|166030762|ref|ZP_02233591.1| hypothetical protein DORFOR_00436 [Dorea formicigenerans ATCC 27755] gi|166029344|gb|EDR48101.1| hypothetical protein DORFOR_00436 [Dorea formicigenerans ATCC 27755] Length = 294 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 102/306 (33%), Gaps = 24/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ +GAY + + GL+ + I Sbjct: 5 SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYIVLTCVTGAGLNPIVAI 64 Query: 97 PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 ++ + G+++ + R +A LI + +L + G + Sbjct: 65 IIATIACTIFGVVIEGVAYRPLRNAASPLAVLITAIGVSYLLQNLALLIFGSNTKSFPEV 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + ++ + A ++L++ +T A + + Sbjct: 125 IKLPNLKLAG---------GKLTITGTTILTIVLCIVIMAGLMLFINKTKAGQAMLAVSE 175 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A + + FA+ SA +AG ++ ++P I + Sbjct: 176 DKGAAQLMGINVNKTISMTFAIGSALAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVF 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ G +L + ++ L +V+L++ Sbjct: 235 GGIGSV-------------PGALIGGIILGIIEILGKAYISSQLADAIVFAVLIVVLLVK 281 Query: 336 SHSLLR 341 +L Sbjct: 282 PTGILG 287 >gi|303247276|ref|ZP_07333550.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] gi|302491435|gb|EFL51323.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ] Length = 294 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 107/304 (35%), Gaps = 21/304 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + LIY + A G ++V G + L++ Y +GA+ + G+ + L + + Sbjct: 6 LVNGFTLGLIYALIAVGYTMVYGVIELINFAHGEIYMLGAFLT-LSFLSMGMPLALAVVL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + A G+++ + + + + +A LI + L I G L F Sbjct: 65 AMLAVAAIGVLLDVVAYRPLREAPRLAALITAIGMSIFLQNLAMIIWGSR------PLPF 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + F S V + + L ++ L + +T I A R + N+ Sbjct: 119 PRQALPAFFNEPAFHFSDVTISWMQVIIYVVALLLMVALNLIITKTRIGTAMRALAQNRT 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ S +AG + + + P M + + + +LGG+ Sbjct: 179 AAALMGINVNRVISFTFALGSGMGAVAGVMVSMYYNTMYPTMGYLA-GVKAFAAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L L G + + + LVI+ R Sbjct: 238 GSVPGAMLGGVVLGIAETLGAGYIS-------------SPYRDGVAYAVMILVIIFRPSG 284 Query: 339 LLRL 342 L Sbjct: 285 FLGR 288 >gi|86607100|ref|YP_475863.1| hydrophobic amino acid ABC transporter permease [Synechococcus sp. JA-3-3Ab] gi|86555642|gb|ABD00600.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Synechococcus sp. JA-3-3Ab] Length = 285 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 96/301 (31%), Gaps = 28/301 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY + A G+S+ G L + +GAY + + +G + + +A+ Sbjct: 12 LVLGSIYALGAIGVSLTFGILRFANFAHGDLMTLGAY-FALTFVGWGWPLEVSWIPAALA 70 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + C + + + + LI S IL I G + Sbjct: 71 TALCAVGIDQLVYRRLRREAPVILLISSFGTALILRSLVQILWGPNNQVYRSGIQLPWQF 130 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ +L+G L ++ L+L+ T + A R + DN Sbjct: 131 WGLRVKPDW------------VAILVGTALLVVALHLFLQHTRVGKAMRAMADNFDLAKV 178 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L +A+ +A +AG F + + V + ILGG+ Sbjct: 179 TGIDTERIILWTWAIGAALACVAGIFLGLDTRL--HPTMGWRLLLPVFAAAILGGIGRPY 236 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ E + + + + F L L++++R LL Sbjct: 237 GAIAGGLVIGLAEEFSTLVLSPAYKTGVAF-------------AILVLLLILRPTGLLGG 283 Query: 343 R 343 R Sbjct: 284 R 284 >gi|146277042|ref|YP_001167201.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025] gi|145555283|gb|ABP69896.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025] Length = 410 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 118/367 (32%), Gaps = 37/367 (10%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + IL L + LL + A S +I ++G + L + A + +V G G+LSL Sbjct: 15 FLLILALFTLGVTLLSHAYGSAFLSTSFIKTLG-KTLCLCLVALAMDLVWGYAGILSLGH 73 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISGACGMIMGLP 113 + +A+G Y + ++ ++ + G + Sbjct: 74 MAFFALGGYMIGMWLMYARTEEIVVQALANAPLPATPQEISNGVASQIFGVVGGAELPAV 133 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L +A +++ + W + G+Y++ + + + Sbjct: 134 WTFAHSLPLQLALVVLVPGLLALAFGWLAFRSRVTGVYLSILTQAMTLALALHLFQNDSG 193 Query: 174 SSFVI------------------YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 ++ ++ + L + WL + R IRD Sbjct: 194 LRGNNGLSGLQNIPGLGGVSQDRLSVWFFWASVAALALGYLLAAWLVSGKFGSVLRAIRD 253 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 +++ L ++ KL F ++ +AGA + I+P +I + V + Sbjct: 254 DEQRVRFLGYSVEGYKLFIFTFTAVVAAVAGALYYPQAGIINPAELAPIASIYLAVWVAI 313 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L A + + G N + + + L+ +A LV L+ Sbjct: 314 GGRGRLYGAVIGAAFVSLLSTWFTGGRAPDVNLGI-YTIQWVDWWQILLGLAFVLVTLLA 372 Query: 336 SHSLLRL 342 + L Sbjct: 373 PQGIGGL 379 >gi|90425643|ref|YP_534013.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90107657|gb|ABD89694.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 433 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 113/329 (34%), Gaps = 32/329 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L+ L L S + I I ++FA +I++G G+LS + Y +G Sbjct: 24 IWIAVALMLLLLPKIFSSGGSLTTFSLIGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83 Query: 79 Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 + I+G ++ + + L+ + ++G + G A+ +L ++E+ Sbjct: 84 FLAIHAINFIVGHKFPIPLPLVPLIGGATGLFFAALIGWVMTQRSGTAFAMISLGLAELV 143 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + + G+AG+ + + + +I +YY++ L Sbjct: 144 ASSALILRSFFGGEAGVS------------ANRTKLLKVFDWNFGPQIQIYYLVAAWTLL 191 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + L RT + +RDN + + + AF + F G+AGA A + Sbjct: 192 AVIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVIRYLAFCFAGFFAGIAGALAAINF 251 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + + ++ V+ +GG+ + + + + Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTFLSLGLSDVTPVW-------- 303 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + V++ + L Sbjct: 304 -------QLYFGLFFIAVVMFAPGGVTGL 325 >gi|23013796|ref|ZP_00053654.1| COG4177: ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 330 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 117/317 (36%), Gaps = 22/317 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ S+ + ++ + +I++G G LSL + +GAY+ L G+ L + Sbjct: 24 PYLLSVLVVVMYFAYVGQTWNIMMGFAGQLSLGHTLYVGLGAYTAAALFVHLGVPAALGL 83 Query: 97 PVSAMISGACGMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 + + G I+G +F +G Y A+ T+ +E + + + Sbjct: 84 FAAVGAAVLTGGIVGALGFRFGVKGVYFALLTIAFAEFTRILFEHIPGL----------- 132 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 G + R + + YY++L M + WL R+ + W +R Sbjct: 133 -GGPGGLFLPVGDRNGIDLIHLRGHPLMFYYLILAMTVGIFLLCRWLLRSRLGYTWLAVR 191 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIV 273 ++Q+A +L + AKL A +S+ + G FFA + + P+ F + +I +I Sbjct: 192 EDQEAAAALGINVFRAKLYAVMLSAGLTALGGVFFAFYYNNLFPNQAFGMNRSIEIILAP 251 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 I+GG+ +L IL + E ++L ++ Sbjct: 252 IVGGLGTLFGPILGALILTPLGEGITLATEAM-------GFKAAGIKQLCYGLSLLAIVK 304 Query: 334 MRSHSLLRLRTPSNFLE 350 + LE Sbjct: 305 FLPDGVWPWARARLGLE 321 >gi|315425101|dbj|BAJ46773.1| branched-chain amino acid transport system permease protein [Candidatus Caldiarchaeum subterraneum] gi|315428034|dbj|BAJ49622.1| branched-chain amino acid ABC transporter permease [Candidatus Caldiarchaeum subterraneum] Length = 321 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 105/306 (34%), Gaps = 12/306 (3%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ + L + +Y + IL+Y ++ G G L L + +GA Sbjct: 6 ALGAVIALAVVPFLVGLNEYYLFLVTLILLYTTIVVAWQLIGGYGGQLDLGAGAYHGLGA 65 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 L YG+S W+ + VS + ++G PS + + A ++ + I Sbjct: 66 VITGFLMVNYGVSGWVGLLVSGAAAAGVAFLIGYPSFRLGLKEVWYALSSLALVLILQKI 125 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 F +R +IF YY+ + + I+ Sbjct: 126 FLLWTDVAGPLERYIPYAEFDPVFMR------------AGTKIFYYYITAALLAATFLIV 173 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 +RR+ +IR+N++A L + KL A + S + G +A+ P Sbjct: 174 SRIRRSKTGLYLISIRENEEAAEMLGVDVRRYKLQALMIYSFIAAVTGGIYASMVGFYHP 233 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 +F +I ++ I+GG+ L + IL+ V E L + + Sbjct: 234 TLFDSWISIQTATLAIVGGLGHLLGPPIVSIILLTVQEYLRITLGAVIIGLHQVIFGIIL 293 Query: 319 RHTTLM 324 + Sbjct: 294 VIIIMF 299 >gi|254514849|ref|ZP_05126910.1| urea ABC transporter, permease protein UrtC [gamma proteobacterium NOR5-3] gi|219677092|gb|EED33457.1| urea ABC transporter, permease protein UrtC [gamma proteobacterium NOR5-3] Length = 361 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 97/333 (29%), Gaps = 19/333 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + V LL + Y S+ + L Y + A L +V G GLLSL +A Sbjct: 23 LAIGVPLSNLLLPQESSFALSSYSVSLLGKYLCYALLALALDLVWGYAGLLSLGHGAFFA 82 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 +G Y+ + R S + LP D+ + A L+ + Sbjct: 83 LGGYAMGMYLMRQIGSRGVYGDPELPDFMVFLDWQELPWYWLGFDHFSFALLMALLVPGA 142 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTV-------------------RSLIRFFRFPSSF 176 + + + + V + T F Sbjct: 143 LALLFGWLAFRSRVTGVYFSIMTQAMTFALMLAFFRNEMGFGGNNGLTDFKDILGFDMQS 202 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 ++ + S W+ T + +RD + L ++ KL F Sbjct: 203 DAVRCGLFVATALLLLASYMGCRWMLATRFGSVVLALRDAESRVRFLGYSVASYKLVVFV 262 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 VS+ G+AGA + I+P F+ +I + V +GG +L I+ Sbjct: 263 VSAMLAGLAGALYVPQVGIINPGEFQPLNSIEIAIWVAVGGRGTLHGAMLGAVIIAAAET 322 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + + L V L Sbjct: 323 MLTARLPELWLFALGALFLLVTLLLPQGVAGLL 355 >gi|110680756|ref|YP_683763.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] gi|109456872|gb|ABG33077.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] Length = 377 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 93/355 (26%), Gaps = 36/355 (10%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N+ + ++ + L + ++ + L Y A GL + G+ G+LSL Sbjct: 6 NRLFSLQDIIGFAILAAVIFILLPLALDTFRLNLFGKYLTYAFVAVGLVLCWGAGGILSL 65 Query: 69 NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 + + +G Y + + + Sbjct: 66 GQGVFFGLGGYCMAMFLKLEASTPENTAIQSTPGIPDFMDWNQLTALPWWWEPFNNLAFA 125 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRSL 166 + + I + L Sbjct: 126 LFAVVAVPVIFAFIIGVAMFRRRVGGVYFAIITQAFAAILTILIIGQQGFTGGVNGITDL 185 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + + +Y+V + F I ++R++ + +RD + Sbjct: 186 RTLNGWDIRTDEAKELLYFVNGILLFACLFIAQFVRKSKLGRLLIAMRDQEDRVRFSGYD 245 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + K+ F + +AF G+ GA F +SP + +I ++ +GG S+ Sbjct: 246 VASFKIFIFCLGAAFAGIGGAMFTLQVGFMSPTLVGIVPSIEMVIFCAVGGRLSIIGAVY 305 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ +F + V+++ + L Sbjct: 306 GALLVNWAKTSLSE--------------TFPELWLLGLGGLFIAVVMLFPNGLAG 346 >gi|114766928|ref|ZP_01445849.1| branched-chain amino acid ABC transporter, permease protein [Pelagibaca bermudensis HTCC2601] gi|114540906|gb|EAU43967.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. HTCC2601] Length = 569 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 13/203 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLI 96 IY + A GL+I G +G++++ +GAY+ ++ Y +S+ + + Sbjct: 359 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIIPDYTVSLIVAL 418 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ ++ A G+ M +++ + + TL+ + L + G + Sbjct: 419 PLAFAVTFAAGVAMERLVIRW-LYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSP- 476 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 S + + V + + I+L L +T + R + N Sbjct: 477 --------SWLDGAWVLNDVVGIANIRIAIFILALIFLGLILLVLNKTRLGLEVRAVTQN 528 Query: 217 QKAFFSLNTTIIFAKLSAFAVSS 239 S+ + F + S Sbjct: 529 PGMAASMGINPDKINMLTFGLGS 551 >gi|312111254|ref|YP_003989570.1| urea ABC transporter permease UrtB [Geobacillus sp. Y4.1MC1] gi|311216355|gb|ADP74959.1| urea ABC transporter, permease protein UrtB [Geobacillus sp. Y4.1MC1] Length = 299 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 90/309 (29%), Gaps = 18/309 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + I + A GL++ G +G++++ +GAY ++ + + Sbjct: 8 IFNGFSLGSILLFVAIGLAVTFGLMGVINMAHGELIMVGAYMTYVVQQIFSKYAPQALEY 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + L + ++L W + Sbjct: 68 YFFAAIPAAFFVSALLGWGVEQLL--IRHLYHRPLDSLLATWGVSLILQQIARTIFGAPN 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + V++ ++L+ + ++ ++L +T R + N+ Sbjct: 126 VAVLPPGWLDG-GIRIAGVVFPYKRLFILVFVILSIFALYIYLTKTPAGRRIRAVTLNRD 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + AFA+ S F G+AG + +VILGG+ Sbjct: 185 MASCLGISTRKVDAYAFAIGSGFAGLAGCALTLLGPI--GPTIGTYYIVDAFMVVILGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L + V L +M + + + Sbjct: 243 GKLIGTVLGAFGIGLVSTLMEYSTSATIAK-------------VIMFALIIAFLQWKPSG 289 Query: 339 LLRLRTPSN 347 L+ ++T S Sbjct: 290 LVSVKTRSL 298 >gi|332654585|ref|ZP_08420328.1| high affinity branched-chain amino acid ABC transporter, permease protein [Ruminococcaceae bacterium D16] gi|332516549|gb|EGJ46155.1| high affinity branched-chain amino acid ABC transporter, permease protein [Ruminococcaceae bacterium D16] Length = 294 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 31/295 (10%), Positives = 90/295 (30%), Gaps = 23/295 (7%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 Y + A G ++V G L L++ + + + L + + +++ +P+ +++ G Sbjct: 18 YALIAIGYTMVYGILRLINFAHGDVFMVAGLLGIYLSATFP--LYVAMPLVVILTVVLGF 75 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + + K ++ +I + +L G + + T Sbjct: 76 CIERVAYKPLRSAPRMSVMISAIGVSYLLQNTATYVTGGQPMIYPSLPFLSDT------- 128 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 + + + + + L + L + RT + A R + + + + I Sbjct: 129 ---ITVAGTSIKWVVLLTPVLVVALVILLTLLINRTKVGMAMRAVAKDFETSQLMGIKIN 185 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 F + SA + + + + + + GG+ S+ Sbjct: 186 SVISITFIIGSALAAIGSMLYFTTYSSV-VPTVGSMPGLKAFVAAVFGGIGSIPGAVIGA 244 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 ++ + F + + L ++++ + L + Sbjct: 245 FLIGICENFVKILPFEGATTFVD----------AFTFALLIIILVFKPTGLFGEK 289 >gi|296128563|ref|YP_003635813.1| urea ABC transporter, permease protein UrtC [Cellulomonas flavigena DSM 20109] gi|296020378|gb|ADG73614.1| urea ABC transporter, permease protein UrtC [Cellulomonas flavigena DSM 20109] Length = 409 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 96/347 (27%), Gaps = 28/347 (8%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + V ++ L + ++ + L M A G+ + G G+L L Sbjct: 29 RGPAARVWIGVAVAAVVLFGLAPAVLSDFRLNLLAKFLCLAMVAIGIGLAWGRGGMLVLG 88 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + + IG Y + + + P LAI L Sbjct: 89 QGVFFGIGGYLMAMHMKLSDAGPGGVPDFMLLYGDGVVPGWWEPFRSPVVTVLAIIVLPA 148 Query: 130 --------------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 ++ + ++ + FF + + Sbjct: 149 GIAALLGLAVFRRRVRGAYFAILSQALAAAFAILLVGQQKVTGGTNGLNGFRSFFGYDLA 208 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + + +Y++ G+ + L + +RD + L K+ A+ Sbjct: 209 DPVNKRMLYFIAAGVLIAMVVAVRLLMASRYGELLVAVRDQENRVRFLGYDPANVKVVAY 268 Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295 AV++AF G+ GA FA ISP +I + V +GG +L + Sbjct: 269 AVAAAFAGIGGALFAPVVGIISPADVGVIPSIGFLVGVAIGGRATLLGPVLGAIAVSWAE 328 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F T +V+ L L Sbjct: 329 TGLSE--------------QFPSFWTYFQGALFIVVVAFLPQGLASL 361 >gi|182683670|ref|YP_001835417.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|182629004|gb|ACB89952.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] Length = 292 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 8 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 68 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGISFLLEYGMVYLVGAN---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 118 -TRAFPQAIQTVRYDLGPISLTNVQLMILGISLILMILLQVIVQKTKMGKAMRAVSVDSD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282 Query: 339 LLR 341 +L Sbjct: 283 ILG 285 >gi|110679438|ref|YP_682445.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] gi|109455554|gb|ABG31759.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter denitrificans OCh 114] Length = 418 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 105/367 (28%), Gaps = 37/367 (10%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + +L L + +L F S ++ ++G + L + A + +V G G+LSL Sbjct: 23 FLGLLALFTLGVTILAEGFGIGVISTSFVKTLG-KTLCLCVVALAMDLVWGYCGILSLGH 81 Query: 71 VIAYAIGAYSYVILGSRYGLSIWL-------------------------------LIPVS 99 + + IG Y+ + I + P Sbjct: 82 MAFFGIGGYAIGMWLMYARTEIIVRESLANAPLPPTPQEISDGIAGQIFGVVGASEFPPI 141 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ + + + + L L + + A + Sbjct: 142 WAVAHSLPLQLAAVVVVPGLIALIFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSG 201 Query: 160 GTTVRSLIRFFRFPSSF----VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L P ++ ++ L I + + R IRD Sbjct: 202 LRGNNGLSGLQNLPGLSHVPQSTVSMWFFWASALALGLGYVICAAVVSGKFGSVIRAIRD 261 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ L ++ KL F ++ +AGA + I+P +I + V + Sbjct: 262 DEARVRFLGYSVEAYKLFIFTFTAILAAIAGALYYPQAGIINPAEIAPIASIYLAVWVAI 321 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L A + + G N + + T L+ ++ V L Sbjct: 322 GGRGRLYGAVIGAAFVSLLSTWFTGGQAPDINLGF-YTIQWVNWWTILLGLSFVAVTLFA 380 Query: 336 SHSLLRL 342 + L Sbjct: 381 PRGIGGL 387 >gi|296532056|ref|ZP_06894833.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296267618|gb|EFH13466.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 291 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 98/305 (32%), Gaps = 27/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + ++ + + GL+++ G + L++ +G Y + ++ GL ++L P Sbjct: 8 VLNGLMLGGLFAIISVGLTLIFGIIRLVNFAHGELLMVGMYLTWLGTTQLGLHPYVLAPP 67 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ G+++ A + + LI + G Sbjct: 68 LVLVLFILGVLIQRFILQPLLEARDAHVQIFATVGLSTALINLALLVFGAD--------- 118 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 S + + + + +++ L++ R+ + A R ++ Sbjct: 119 --LYATPSSGVRDSLSFGPFRVMVGQLVMFVCGIAVVSALHLFMERSHLGRAIRATAQHR 176 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A + + + F + +A +G+A A A F +V+LGG Sbjct: 177 AAAQLMGVDVQRIYIVTFGIGAACVGLAAALVAPVYPASPTVGTYFVL--TAFVVVVLGG 234 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 M SL ++ V L ++ L++L R Sbjct: 235 MGSLHGAFLGAMLIGLVDSLSGYYI-------------APDLKEVVIFALFILILLFRPT 281 Query: 338 SLLRL 342 LL L Sbjct: 282 GLLGL 286 >gi|283780314|ref|YP_003371069.1| Monosaccharide-transporting ATPase [Pirellula staleyi DSM 6068] gi|283438767|gb|ADB17209.1| Monosaccharide-transporting ATPase [Pirellula staleyi DSM 6068] Length = 451 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 87/295 (29%), Gaps = 18/295 (6%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 A + + ++ QI + + A G+++V+ G + L+ A+ A ++ +R Sbjct: 145 WPAFLKSENLINITSQIAVISILAVGMTLVI-ISGGIDLSVGSLVALSA----VVMTRLI 199 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 S + CG+ L I L+ F L + G Sbjct: 200 RDYAGAEQASTIGMVVCGLTAILVCAAVGAASGTIIALLKMPPFIVTLATMLIV----GG 255 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + V + + ++ + + + + + +R+ Sbjct: 256 LSFLISESKSINQVPPSLGWLGNGATLLGIPNCVVLMGVVFGVCELLL----QRSVFGRH 311 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + N +A + +A+ A G+ G +A+ + + E + Sbjct: 312 LYALGGNPRAAVLCGIRTERLLVVIYALCGALAGLGGVVYASQLRSGAATYGQDYELQTI 371 Query: 270 ISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 ++V+ GG +L + IL + + + Sbjct: 372 AAVVVGGTSLSGGEGTLRGTLIGSLILGVIANGMNLLGLNTETQRIMLGLVILAA 426 >gi|253991196|ref|YP_003042552.1| branched-chain amino acid permease LivH [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782646|emb|CAQ85810.1| high-affinity branched-chain amino acid transport system permeas protein livh (liv-i protein h) [Photorhabdus asymbiotica] Length = 308 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 94/312 (30%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y I+ + L Sbjct: 12 MLNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMLMGIDLGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S +I+ G + + + + LI + L + ++ G Sbjct: 72 LITAAFLTSIVIASTYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + + +++R + + A Sbjct: 129 ----RDLALPSLITGQWVLGESDGFSASITAMQLTIWIVTFLAMLVLTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMTSLLGINTDKVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L + Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVSEALTSAYLSTEYKDVVSF-------------ALLII 290 Query: 331 VILMRSHSLLRL 342 V+L +L Sbjct: 291 VLLFMPTGILGR 302 >gi|170741802|ref|YP_001770457.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168196076|gb|ACA18023.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 306 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 100/309 (32%), Gaps = 15/309 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + ++ + A GL++V G + L++L Y +GAY L Sbjct: 10 LNGVQLGILLFLVAAGLTLVFGVMDLINLAHGALYMVGAYLAAT----------LAGLTG 59 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + G + + + L I L + +L + I G+ + + Sbjct: 60 SFGLGLLLALPASLAFGLLVEALVIRHLYERDHLDQVLATFGLILILNEGVRILWGNAPM 119 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + + Y ++ ++ + + L + RT + R + Sbjct: 120 SVALPEALSGAVPLTGTLRYPLYRVAIIAAGLAAALLLHLLVHRTRLGMQLRAGATHGPI 179 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L + F + + G AGA A S I+ ++++GG+ Sbjct: 180 VAALGVDVRRLFRLVFGLGAVLAGFAGAMVAPILSV--DPGMGDSVLILTFVVIVIGGVG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336 S+ A+ I+ +L SL++ + T L I + V+ R Sbjct: 238 SVRGAFVASLIVGLADQLGRSFGPILLRSLMEASAAAQTGRTLAPMLTYILMAGVLAFRP 297 Query: 337 HSLLRLRTP 345 L R Sbjct: 298 AGLFPARGR 306 >gi|76799156|ref|ZP_00781339.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] gi|77408298|ref|ZP_00785040.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|76585486|gb|EAO62061.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] gi|77173061|gb|EAO76188.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] Length = 266 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 94/284 (33%), Gaps = 25/284 (8%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 +V G + L++ Y +GA+ L + L+ +L + ++ + S G+++ + + Sbjct: 1 MVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLIAMLGSAFLGVVIEYLAYRP 60 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 IA LI + +L G I ++ + Sbjct: 61 LRKSTRIAALITAIGVSFLLEYGMVYLVGAD-----------TRAFPQAIHTVKYNLGPI 109 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +L L ++ +++T + A R + + A + + FA+ Sbjct: 110 TITNVQLIILGIALLLMLTLQFIVQKTKMGKAMRALSVDSDAAQLMGINVNRTISFTFAL 169 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 SA G G + + P M + + +LGG+ + A ++ + L Sbjct: 170 GSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGIGIIPGAAIGGFVIGILETL 228 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + ++ L L+ L+R +L Sbjct: 229 ATALG-------------VSDFRDGIVYAILILIFLIRPAGILG 259 >gi|254711901|ref|ZP_05173712.1| Bacterial inner-membrane translocator [Brucella ceti M644/93/1] gi|254714971|ref|ZP_05176782.1| Bacterial inner-membrane translocator [Brucella ceti M13/05/1] gi|261216665|ref|ZP_05930946.1| inner-membrane translocator [Brucella ceti M13/05/1] gi|261319534|ref|ZP_05958731.1| inner-membrane translocator [Brucella ceti M644/93/1] gi|260921754|gb|EEX88322.1| inner-membrane translocator [Brucella ceti M13/05/1] gi|261292224|gb|EEX95720.1| inner-membrane translocator [Brucella ceti M644/93/1] Length = 406 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 107/311 (34%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +YY+ L S ++ L T Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 ++R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 SLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFSHVTSDVTRSW---------------LLYQGLIFVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|309779225|ref|ZP_07673988.1| amino-acid transmembrane ABC transporter [Ralstonia sp. 5_7_47FAA] gi|308922029|gb|EFP67663.1| amino-acid transmembrane ABC transporter [Ralstonia sp. 5_7_47FAA] Length = 302 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 118/302 (39%), Gaps = 41/302 (13%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 ++ + + I + A + + + S GLL++ IGAY+ +L + + + Sbjct: 11 YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTAALLTMNAEMPFSVALLG 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++G P+L+ G YLA+ATL E+ + +++ + T G G+ +L Sbjct: 70 GMAAPAVVAVVIGRPTLRLSGVYLAMATLGFGEVVRVLILNTENWTGGALGLNGIPQLTE 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ +RR+ + A+ I++++ Sbjct: 130 WWH-------------------------VAVAVLATLFVLARMRRSKVGRAFEAIKEDET 164 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + KL AF + +A G+AGA A I P+ F F + ++++ ILGG Sbjct: 165 AAGLMGINVAGTKLLAFTLGAAIAGLAGALNAHLTFFIGPNEFGFDRGVEILTMTILGGT 224 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L+ + IL + EL + + + L +++L Sbjct: 225 NGLTGPVLGSLILSLLPELLRAFKDF---------------RLVVNGVILMVIVLFLPKG 269 Query: 339 LL 340 + Sbjct: 270 IW 271 >gi|86158847|ref|YP_465632.1| chain amino acid ABC transporter inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85775358|gb|ABC82195.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Anaeromyxobacter dehalogenans 2CP-C] Length = 288 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 13/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S + +Y + GL+++ G + + + +G Y + + + +L I + Sbjct: 8 VLSGLLVGGVYALIGIGLTLIFGVMRVTNFAHGELLMLGMYLAWLAFTGLHVDPFLSIVL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A G + + L ++++ I+ + Sbjct: 68 VAPAMFLWGAFLQKSFVNRVLGALPQNQILLTIGLGLIMSNTVMLI-----------FTS 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + + + Y L ++ ++ +L +T A R ++ Sbjct: 117 DYRILTTTYSSSSYKLAGLSISQPLLYAFLITVAITGALYWFLLKTDTGQAIRATAQDRD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + AF + SA G AGA + + F+ IV+LGGM Sbjct: 177 AAQLMGINVRRMSVLAFGIGSALAGTAGALISPTYYIFPQVGSTFTL--KAFVIVVLGGM 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ I+ L L+ F + + Sbjct: 235 GSVVGATLGGIIIGVAESLSAVYIASGLKELVTFVLFLALLLFKPAGLL 283 >gi|170732743|ref|YP_001764690.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|169815985|gb|ACA90568.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 409 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 107/336 (31%), Gaps = 27/336 (8%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + + Q V+ A ++ +G+ GLLS Sbjct: 4 RALAGCMRWALFAACVALPAWLWPHGAVLGYLAQTAALVVLALSYNLQLGTTGLLSFGHA 63 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +GA++ + G + LL V M G + GL + + G A+ TL + E Sbjct: 64 AFAGLGAFAAAHWFNHVGGPLPLLPLVGGMAGAGFGFVAGLLATRRSGTAFAMITLGLGE 123 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 G G+ + + + + Y V+ C Sbjct: 124 CVAAAAWSVPAWFGGIGGVPI------------DRASGGPWGNGYFGAPAHAYAVIAAWC 171 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 SA+ + L RT ++ +RDN +L T +L+ +S F G+AG Sbjct: 172 VASAAAMHVLTRTPLARLANAVRDNPARVAALGTDPRRVRLAMVTCASFFAGVAGTLTLI 231 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + +PD + + V+ ++GG + A A+L + G++ + Sbjct: 232 DVELATPDSVSMARSATVLIAAVIGGTGAFLGPAAGAAVLTALSIGVAGVSRAW------ 285 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +++ + + Sbjct: 286 ---------ALYLGVLFVAIVVAAPGGIAGIARALA 312 >gi|116695945|ref|YP_841521.1| ABC transporter permease [Ralstonia eutropha H16] gi|113530444|emb|CAJ96791.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 294 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 97/297 (32%), Gaps = 8/297 (2%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 +IY M A G ++ G L ++ + +GA++ + S +++ + P +++ Sbjct: 1 MIYAMVAVGFTLFFGVLDVIKFSHGDVLMVGAFA-GLAASAGVVAMHVDSPWLQLLAIVV 59 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 + L + I L + +L T + + + +L Sbjct: 60 CAVTVTGLLGAGIARVLILPLRRAPPLNTLLATLMLGTVLREAVRLFYPDGSNPKPFPAL 119 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + F + +L + + L + RT A R + + + + Sbjct: 120 LPAGEFTIGALSIRADNLILLAAGVAIILGVHLLITRTRFGMAIRAVAQDGETARLMGIN 179 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 L FA+ SA +AG + I+ ++ +I + ILGG+ ++ Sbjct: 180 FEVVVLVTFALGSAMAALAGVMNGLYYNEINFNV-GLLLGVIGFAAAILGGLGNIYGAIL 238 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L M + + + +++ + L+ + Sbjct: 239 GGFLFAALQVLGSAMLPALVPDI------PSAYKDVFAFAVVIVLMAWKPTGLIAEK 289 >gi|322387415|ref|ZP_08061025.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] gi|321141944|gb|EFX37439.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] Length = 289 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 105/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + L+ +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYFLINALHLNFFLALIL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + S G+I+ + + I+ LI + +L G Sbjct: 65 SMIGSAILGVIIEFLAYRPLRHSTRISVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + L +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNIQLLILTVSIVLMILLQLIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + I +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGIKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|77411399|ref|ZP_00787746.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77414834|ref|ZP_00790950.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|77159111|gb|EAO70306.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|77162572|gb|EAO73536.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] Length = 266 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 93/284 (32%), Gaps = 25/284 (8%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 +V G + L++ Y +GA+ L + L+ +L + ++ + S G ++ + + Sbjct: 1 MVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLIAMLGSAFLGAVIEYLAYRP 60 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 IA LI + +L G I ++ + Sbjct: 61 LRKSTRIAALITAIGVSFLLEYGMVYLVGAD-----------TRAFPQAIHTVKYNLGPI 109 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +L L ++ +++T + A R + + A + + FA+ Sbjct: 110 TITNVQLIILGIALLLMLTLQFIVQKTKMGKAMRALSVDSDAAQLMGINVNRTISFTFAL 169 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 SA G G + + P M + + +LGG+ + A ++ + L Sbjct: 170 GSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGIGIIPGAAIGGFVIGILETL 228 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + ++ L L+ L+R +L Sbjct: 229 ATALG-------------VSDFRDGIVYAILILIFLIRPAGILG 259 >gi|254384242|ref|ZP_04999586.1| branched-chain amino acid ABC transporter permease [Streptomyces sp. Mg1] gi|194343131|gb|EDX24097.1| branched-chain amino acid ABC transporter permease [Streptomyces sp. Mg1] Length = 310 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 103/307 (33%), Gaps = 11/307 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLI 96 + + +Y + A G ++V G + L++ + IG + G S+ + I Sbjct: 8 LANGLALGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTAYAALPTGTSLLIAI 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P+ + + + + +F L A + I L ++ Sbjct: 68 PIMIVGGALASVAVATAAERFAYRPLRSAPRLAPLITAIGLSIALQ-----QLVWQFYPD 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + + +VL+ ++ ++++++ A + + Sbjct: 123 AKKAVSFPEFKGAAFKITDSLAIQRADAFVLILAPLCMLALGVFVQKSRSGRAMQATAQD 182 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + AFA+ +AF +A + + +I+ +M F + + +LG Sbjct: 183 PDTAKLMGINTDRIIVMAFAIGAAFAAVAAVAYGLDKGQINFEM-GFILGLKAFTAAVLG 241 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ +L L +++ +++I + LV R Sbjct: 242 GIGNIYGAMVGGVVLGLAEALSIAYIEDIPGMSQLGGGAWSNVWAFVLLIVVLLV---RP 298 Query: 337 HSLLRLR 343 LL R Sbjct: 299 QGLLGER 305 >gi|295400899|ref|ZP_06810875.1| urea ABC transporter, permease protein UrtB [Geobacillus thermoglucosidasius C56-YS93] gi|294977162|gb|EFG52764.1| urea ABC transporter, permease protein UrtB [Geobacillus thermoglucosidasius C56-YS93] Length = 299 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 90/309 (29%), Gaps = 18/309 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + I + A GL++ G +G++++ +GAY ++ + + Sbjct: 8 IFNGFSLGSILLFVAIGLAVTFGLMGVINMAHGELIMVGAYMTYVVQQIFSKYAPQALEY 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + L + ++L W + Sbjct: 68 YFFAAIPAAFFVSALLGWGLEQLL--IRHLYHRPLDSLLATWGVSLILQQIARTIFGAPN 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + V++ ++L+ + ++ ++L +T R + N+ Sbjct: 126 VAVLPPGWLDG-GIRIAGVVFPYKRLFILVFVILSIFALYIYLTKTPAGRRIRAVTLNRD 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + AFA+ S F G+AG + +VILGG+ Sbjct: 185 MASCLGISTRKVDAYAFAIGSGFAGLAGCALTLLGPI--GPTIGTYYIVDAFMVVILGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L + V L +M + + + Sbjct: 243 GKLIGTVLGAFGIGLVSTLMEYSTSATIAK-------------VIMFALIIAFLQWKPSG 289 Query: 339 LLRLRTPSN 347 L+ ++T S Sbjct: 290 LVSVKTRSL 298 >gi|113867551|ref|YP_726040.1| ABC transporter permease [Ralstonia eutropha H16] gi|113526327|emb|CAJ92672.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 290 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 90/305 (29%), Gaps = 26/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + IY + A GL+++ G L +++ A Y L +R + + + V Sbjct: 11 WLNGLTTGAIYALVALGLTLIYGVLHIVNFAHGAALMAALYGVYFLFTRLHVDPYAALLV 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A G ++ + L+++ +L Sbjct: 71 MLPAMFAAGYLLQRHLIARASRGNEQNVLLVTLGISIVLENLALYLFRSD---------- 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + + G ++L +RRT + A R + ++ Sbjct: 121 -TYTIDTPYALSTVELLGASIALPKVIAFAGALLACGLLMLMIRRTTLGRAIRAVAREKQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + +F + A +G A F + F I ++V+LGGM Sbjct: 180 GARVVGIDVERVYALSFGIGLACLGAAACFLLPAYYVNPRVGDGFVL--IAFTVVVLGGM 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S + ++ V L + + + LV+L R Sbjct: 238 GSFAGALWGGLLIGVVESLGGLWLGDSLGQVG-------------IFLIFILVLLFRPQG 284 Query: 339 LLRLR 343 L + Sbjct: 285 LFGAK 289 >gi|170694148|ref|ZP_02885303.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|170140888|gb|EDT09061.1| inner-membrane translocator [Burkholderia graminis C4D1M] Length = 291 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 97/304 (31%), Gaps = 29/304 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIP 97 + ++ + I V+ A GL+IV G + +++L IGAY+ + + WL + Sbjct: 4 VLNILSYVSILVLVALGLAIVFGMMDIVNLAHAEWVTIGAYTLAVVQAVGGLQAFWLALL 63 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + ++ + ++ D L + + + + Sbjct: 64 AAPIVGALLAWCLERFIIRLLYDRPLDTLLATYAVGLILRKALELVFG------------ 111 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + P Y + +V+ ++A L RT R + ++ Sbjct: 112 -NQPMLVYAPFATAVPVPGGNYPAYRIFVVGVAFAVTAGCWLIFARTRFGTQLRAVIQHR 170 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 ++ AF +A +AG A S + +++LGG Sbjct: 171 AMAEAVGIDTRRLNRIAFCGGAALASLAGVLIAPMVSVESH--LGVAYLAKAFFVIVLGG 228 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S++ + ++ L F+S L++I +VI R Sbjct: 229 IGSIAGSILGSVVIGSAETLLSYRLDPSFSSA-------------LVLILSIIVIRFRPQ 275 Query: 338 SLLR 341 L+ Sbjct: 276 GLVP 279 >gi|241765515|ref|ZP_04763478.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241364699|gb|EER59718.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 287 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 86/302 (28%), Gaps = 27/302 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A GL++V G L + + Y +GA+ L S +G + W+ + Sbjct: 8 VLNGLTLGGIYSLVALGLTLVYGILHVPNFAHGAFYMVGAFVSFHLMSAWGWNYWVAMAG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 SA M+ + +I + L G + Sbjct: 68 SAACVAVLAMLAERLVFHPLRHASGLHPMIAAIGVLLFLEASAQAIWGADFQRMQTP--- 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + ++ L ++ +L++T + + + N+ Sbjct: 125 ---------YTGIIDLGGVTAPVQRLLIIGAAFALVVALHFFLKKTVMGSTIIAMAQNRD 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+S A +A + I+ILGGM Sbjct: 176 GASLVGIDANRVAMLTFAISGVLAAAAATLYAP--INLVYPAMGNLVITKAFVIIILGGM 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + L +++ +R Sbjct: 234 GSVPGAIVGGLIIGFAESFGAYYIS-------------TDYKDIMAFVLLVVILSLRPQG 280 Query: 339 LL 340 L Sbjct: 281 LF 282 >gi|229492742|ref|ZP_04386543.1| ABC branched chain amino acid transporter, permease component [Rhodococcus erythropolis SK121] gi|229320401|gb|EEN86221.1| ABC branched chain amino acid transporter, permease component [Rhodococcus erythropolis SK121] Length = 453 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 23/304 (7%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 L+ + GLS++ G+ GL + +GA + ++ + +G + + + ++ Sbjct: 170 LRFGLVIAIAGVGLSLIYGTTGLTNFAHGEMVTLGAVAAWVINTSFG----VPLIPATIL 225 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + G+ +GL + L + + + + Sbjct: 226 AIFVGIGIGLLTNGIVWKPLRKRKTGLIAQLVVSIGLAISLR-----YLILIFFSDRAEP 280 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + V++ + + L L++T I A R + DN+ S Sbjct: 281 FDDYQGQVEKNWGPIALTDANAIVMIVSLVVLVGVALLLQKTRIGKAMRAVSDNRDLAAS 340 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENIIVISIVILGGMTSL 281 + + + + + G F S F +++ + + LGG+ + Sbjct: 341 SGINVERVIMFVWGLGGGLAALGGVLFGISELGGRVQWEMGFKLLLLMFAGITLGGLGTA 400 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ +V+L + + + R +L Sbjct: 401 YGALLGCVIVGLLVQLSTLIINPDLKYIGGLLVLIVILVV-------------RPQGILG 447 Query: 342 LRTP 345 R Sbjct: 448 SRQR 451 >gi|118474101|ref|YP_891602.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein [Campylobacter fetus subsp. fetus 82-40] gi|118413327|gb|ABK81747.1| ABC transporter, hydrophobic amino acid uptake transporter (haat) family, permease protein [Campylobacter fetus subsp. fetus 82-40] Length = 298 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 96/303 (31%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GAY+ + + L + Sbjct: 10 MVNGFSLGSMYALIAIGYTMVYGVLRLINFAHGDIMMVGAYAALFSMTSLSLPFGFALLF 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+ + K I+ LI + +L + G YF Sbjct: 70 AITVAIILGVFTDRIAYKPLRKAPRISLLITAIGISFLLENVFQVIFGGTPRSFPVPSYF 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + I +F+ V+L + + RT A R + + Sbjct: 130 EQLVTIGSVNLAMTAILVPIITLFLLSVVLFILY----------RTKYGMAIRALAFDIS 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ S+ + G F+A + I P M + + +LGG+ Sbjct: 180 TVHLMGIDANMIISIVFALGSSLAAIGGVFWALNYPSIDPLM-GVLIGLKAFAAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ + + F I L LV+L + Sbjct: 239 GSVGGAVLGGFIIGFTEVVAVALFPDLAGFKDAFA-----------FIFLILVLLFKPTG 287 Query: 339 LLR 341 +L Sbjct: 288 ILG 290 >gi|293603308|ref|ZP_06685736.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818218|gb|EFF77271.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 309 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 116/319 (36%), Gaps = 26/319 (8%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L ++ + +Y +FA G +++ G LG+++L + +GAY+ + + Sbjct: 8 ALIDLESPIMFEQQFVNALSLGCVYALFALGFTLIFGVLGVINLAHGAVFMVGAYAALFV 67 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKP 142 +GL +W + V+ ++G G+I+ + + + +I + IL Sbjct: 68 VQHFGLPLWAALMVAFFVAGFTGVIIDYLVLKPLRKRNAPHLIPMIATIGVGIILNNGAQ 127 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 G + + + + + + ++ L A ++ +R Sbjct: 128 SIFGASNLRFPH----------GTVPEEVIEVAGLHLTVIELGIIFLSFALMAVLMYVMR 177 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 RT A R I ++ KA + L + ++ ++A G+AG + + P M + Sbjct: 178 RTQFGRALRAIAESPKAAWLLGINVEKLFVTTSFAAAALGGVAGVLIGLYSNALFPLMGQ 237 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + +++ILGGM + L L + F Sbjct: 238 PMLHKGI-AVIILGGMGDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG--------- 287 Query: 323 LMVIALFLVILMRSHSLLR 341 LFL++L+R L Sbjct: 288 ----LLFLILLVRPQGLFG 302 >gi|311895444|dbj|BAJ27852.1| putative branched-chain amino acid ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 309 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 12/310 (3%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIW 93 + + + + L+Y + A G ++V G + L++ + IG + G S+W Sbjct: 5 PQNLANGLMLGLMYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTAYAALPQGTSLW 64 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L +PV + ++ + +F L A + LI ++ + A Sbjct: 65 LALPVMILGGVLASVLTATAAERFAYRPLRGAPRLAP------LITAIGLSIALQQVVWA 118 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + ++L + ++R T A + Sbjct: 119 FYPDGKKALSFPQFAGDPIGLGAFHLQRNDLFLLAAAPLCMLVLATFVRLTRTGRAMQAT 178 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 + + + AFA+ +AF +A ++ M F + + Sbjct: 179 AQDPDTAKLMGVDTDRIIVIAFALGAAFAAVAAVAHGLRYGQVDFTM-GFLAGLKAFTAA 237 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ ++ +L L ++ +++I + LV Sbjct: 238 VLGGIGNIYGAMLGGLVLGIAESLATAYIQDVPGMHQLGGGAWANVWAFVLLIVVLLV-- 295 Query: 334 MRSHSLLRLR 343 R LL R Sbjct: 296 -RPQGLLGQR 304 >gi|166368929|ref|YP_001661202.1| inner-membrane translocator [Microcystis aeruginosa NIES-843] gi|166091302|dbj|BAG06010.1| inner-membrane translocator [Microcystis aeruginosa NIES-843] Length = 316 Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 103/319 (32%), Gaps = 31/319 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG------------- 85 + + +Y +FA G +++ LG+++ + +GAY L Sbjct: 10 VLNGLSIGSVYAIFALGYTLIFSILGIINFAHGAIFTLGAYFTYALAGGVFGFNGLLANA 69 Query: 86 -SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + L +L + + ++SG +++ + K + + L + ++ I Sbjct: 70 KLPFSLPFFLALLLGCILSGFTSVLLERLAFKPLRVRGSDSLLTLVSSLGAAVVIVNVIQ 129 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 F V + L + A + W+ T Sbjct: 130 Y--LFGAEIYTFPDGIYGNLPPAINFGTADRPVAIRTIQIIIFLVSAVMVALLTYWVNFT 187 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + A + + ++ L + F +S A G+AG +S I+ F + Sbjct: 188 KMGKALQAVAEDVTTASLLGINPEKFIVITFFISGALAGLAGTLVGSSV-SIAGPYFGIA 246 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + + +++LGG+ S+ +L ++ + Sbjct: 247 FGLKGLGVIVLGGLGSIPGAVIGGLLLGIAEAFV--------------PAEYSGYREAIA 292 Query: 325 VIALFLVILMRSHSLLRLR 343 LF+++L+R LL + Sbjct: 293 FAILFIMLLVRPQGLLGRK 311 >gi|292654118|ref|YP_003534016.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] gi|291369856|gb|ADE02084.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] Length = 321 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 101/303 (33%), Gaps = 28/303 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + +Y + A GL+++ G + +++ I +G YS ++ G+S +L IP++A + Sbjct: 47 LLLGGVYALTALGLTMIFGVMDVINFAHGIFLVVGMYSVWLVSETAGISPFLGIPIAAAV 106 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 A G+++ + +++ + LI + I+ I V Sbjct: 107 LFALGVVVHILTVEPIIEAPQQNQLIATLGVLFIIQSAIEIVFTPDPQQV---------- 156 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + V + +Y L+ ++ +L RT + R DN+ Sbjct: 157 ---ELSLGSVQVGDVFIPLGQFYALVIALGTMLAVRAFLNRTDLGRKIRGTADNRDGARY 213 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + +A G+AG A + + I IVILGG+ S Sbjct: 214 VGINVRRINYLTFGIGAALAGVAGGSIALFQRFDPFTGETYL--INAFVIVILGGLGSFP 271 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 I+ + L+ + +L++ L Sbjct: 272 GAFVGGLIVGMIQVFGGYYLP-------------GTTAQVLIFLLFIGTLLVKPEGLFGG 318 Query: 343 RTP 345 Sbjct: 319 AEA 321 >gi|256111132|ref|ZP_05452168.1| hypothetical protein Bmelb3E_00831 [Brucella melitensis bv. 3 str. Ether] gi|265992643|ref|ZP_06105200.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] gi|262763513|gb|EEZ09545.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] Length = 331 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 25 LSAIVLGIALVGLIATPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 81 GAAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328 >gi|268325973|emb|CBH39561.1| putative high-affinity branched-chain amino acid transport system permease protein livM [uncultured archaeon] Length = 278 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 118/284 (41%), Gaps = 17/284 (5%) Query: 46 ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105 +L++ M++ +++ + G SL + IG Y I+ + +GL + L I + + Sbjct: 1 MLVFTMYSSAWNLLA-TSGQGSLGHAAFFGIGGYVSAIISNSFGLPVILTIIIGGFFAAV 59 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 G+++GL ++ + +LA+ T + I Q + ++ +T G GI Sbjct: 60 IGVLIGLTCVRLKAWFLAMVTFGFAIIVQTVTVELSGLTGGWDGIPA------------- 106 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 P + + ++ YY++L + + II + ++ + A IR+N+ + Sbjct: 107 ---KKLVPVTITNHVMYEYYIILLIAVVVIVIIYLIMKSKMGLALEAIRENELEAKVMGI 163 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + KL AFA S+ F G+AGA ++P+++ + I + GG+ ++ Sbjct: 164 NVTVYKLKAFAASAFFTGIAGALEIHHFGYVTPEVYGIDISFWPIIYSVSGGLYTIGGPI 223 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 T ++ + E+ Y +L + + Sbjct: 224 LGTVVITAIWEVLRSFGMTYGRFILIGLILILIVIFLPKGLISI 267 >gi|152997218|ref|YP_001342053.1| inner-membrane translocator [Marinomonas sp. MWYL1] gi|150838142|gb|ABR72118.1| inner-membrane translocator [Marinomonas sp. MWYL1] Length = 331 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 117/320 (36%), Gaps = 24/320 (7%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L+ + ++ +ILI+ + A ++++G GLLS I + GAYS Sbjct: 11 ITLIALALIVVMPIILPSVTLATEILIFALAALACNLLLGYTGLLSFGQGIFFGGGAYSA 70 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 ++ ++ + + + +I+G S++ G Y + TL +++ + + Sbjct: 71 SLVMLHLDFGLFGALITAIIAGALLALIVGALSIRRSGIYFVMLTLAFTQMAYFLAYTFS 130 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 T G G+ R + FF S + Y + + + + Sbjct: 131 DWTGGDNGLLDVPRPE---------LNFFGLTISELKSSEDFYIFVAALFSIVFIFARRV 181 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + IR+N+ ++ + KL AF +S A G+AGA +A + Sbjct: 182 IHSPFGTTLVAIRENENRSSAVGFSTNHFKLIAFVISGAITGLAGALYAMLLNFSPLSNI 241 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + ++ + I+GG +SL ++ + +L + + Sbjct: 242 DLVMSENILIMTIIGGTSSLIGSILGAGAIVLIGDLLSSIWPRW---------------M 286 Query: 322 TLMVIALFLVILMRSHSLLR 341 ++ IAL V+L L Sbjct: 287 MILGIALIAVVLFLPGGLWG 306 >gi|91780478|ref|YP_555685.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693138|gb|ABE36335.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia xenovorans LB400] Length = 291 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 101/304 (33%), Gaps = 29/304 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIP 97 I ++ + I ++ A GL++V G + +++L IGAY+ I + WL + Sbjct: 4 ILNILGYVSILMLVALGLAVVFGMMDIVNLAHAEWVTIGAYALAIAQAVGGQQAFWLALV 63 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 V+ + A G + ++ D L+ + IL K + G + V Sbjct: 64 VAPAVGAALGWCLERFIIRLLYDRPLDT-LLATYAVSLILQKVLELIFGTQPMLVYAPFS 122 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + P Y + +V+ ++A L T + R + ++ Sbjct: 123 GV------------VPVPGGSYPAYRIFVIGVALTVTAGCWLLFACTRVGTQLRAVIQHR 170 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + AF + +AG A S S +++LGG Sbjct: 171 AMAEATGIDTRRLNRIAFCGGAGLASLAGVLVAPMVSVESH--LGVSYLAKAFFVIVLGG 228 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S++ +A++ L S ++++ +VI R Sbjct: 229 IGSIAGSILGSAVIGTAETLLSYRVDPSLASA-------------MVLVLSIVVIRFRPQ 275 Query: 338 SLLR 341 L+ Sbjct: 276 GLIP 279 >gi|91789176|ref|YP_550128.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91698401|gb|ABE45230.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 334 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 108/288 (37%), Gaps = 9/288 (3%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L+ LFL + Y ++ I Y + G +++ G G LS + AIGA Sbjct: 23 VIFAVLVAALFLAPQVADSYHLTLMIPFFGYSIVLLGFNLLFGYGGQLSFGHAMFVAIGA 82 Query: 79 YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y S+ L++ VS S + + L + +F G + + TL +F + L Sbjct: 83 YGAAGAARWMGVASMELMLLVSVCASIVIALPIALIASRFTGIFFGMLTLSFGMLFHSFL 142 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 K+ IT G++G+ V YY +L +C + A + Sbjct: 143 FKFYDITGGESGMRVPRPSLLGKVFEDLDKT--------AFLVGPFYYYVLVICLVLAWL 194 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + + RDN + I + AF +S+A+ + G + S Sbjct: 195 MWRVVHSPFGLHLMASRDNPSKAAYVGVKIRAVRTVAFVISAAYGAVGGVVLSVSTGLAD 254 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 P++ ++ + ++ + +LGG I + +L Y+ Sbjct: 255 PELAYWTHSGHIVFMAVLGGYQEFFGPVVGAFGFILMQDLLMSATQYW 302 >gi|307298792|ref|ZP_07578594.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2] gi|306915217|gb|EFN45602.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2] Length = 313 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 93/312 (29%), Gaps = 18/312 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + +Y + A G ++V G L L++ + + Y + + L +L Sbjct: 8 QNFINGLSLGSLYALIAIGYTMVYGILRLINFAHGDIFMMAVYFALFFVTLAQLPWYLAA 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + G + + K + I+ LI + L + Sbjct: 68 ILAVACAALLGFTVDRIAYKPIRNAPRISALITAIGVSFFLESLAVVVFSGIPRSFRTIF 127 Query: 157 YFLGTTV------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + + + + L+ + ++ +T + A Sbjct: 128 PQSLNEMIIIGGEMEVKYGREVIVGGIRFPVISLITLIVAAIALVFLWWFIFKTKVGMAM 187 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + + + + + FA+ SA G+ G +A ++ P M F + Sbjct: 188 RAVSLDIQTTSLMGVNVDRVIGMTFALGSALAGIGGILWAIRYPQVWPYM-GFIPGMKAF 246 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + GG+ S+ IL + G+ L + Sbjct: 247 VAAVFGGIGSVPGAVLGGLILGITEVMMVGIMP-----------GAAGYRDAFAFFILII 295 Query: 331 VILMRSHSLLRL 342 V+ ++ LL Sbjct: 296 VLSIKPSGLLGR 307 >gi|323356625|ref|YP_004223021.1| branched-chain amino acid ABC transporter permease [Microbacterium testaceum StLB037] gi|323272996|dbj|BAJ73141.1| ABC-type branched-chain amino acid transport system, permease component [Microbacterium testaceum StLB037] Length = 325 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 110/302 (36%), Gaps = 19/302 (6%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + +Q + + GLS+ +G G SL A+G + + G+ L + V+ Sbjct: 24 TFFVQTALTALVVTGLSLFMGYAGQASLGQGAFVAVGGLTVAVGTVTLGIPPLLALIVAP 83 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++ ++G P L+ RG YLA +L + I Q ++ G + Sbjct: 84 VLGALVAALVGWPLLRLRGHYLAFGSLAVLLIIQTVMATAPLFGAGVGIFGIPPL----- 138 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 V + YV L + + L R+ R + ++ A Sbjct: 139 ----------SVAGFVVPDQRVYSYVALAALAAALVVCHNLVRSRFGRGIRALAGSESAA 188 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 S I+ +KL+ FAV+ F G AGA A +S D + + + + ++GG+ S Sbjct: 189 ASSGVPILRSKLTVFAVAGGFAGFAGALGAFFTPYVSQDTYPPFASFGYVVMAVVGGLGS 248 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + T L +++ ++ + + + I L + +L ++ Sbjct: 249 VWGGVVGTLALSLWLQVLSALS----ATPGMPAAAGPILQYAGYGIVLVVFLLFVPRGIV 304 Query: 341 RL 342 Sbjct: 305 PT 306 >gi|237728771|ref|ZP_04559252.1| inner-membrane translocator [Citrobacter sp. 30_2] gi|226909393|gb|EEH95311.1| inner-membrane translocator [Citrobacter sp. 30_2] Length = 308 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ L++R + + A Sbjct: 129 ----RDVALPSLFNGQWTVGSSDNFSASITTMQLVIWIVTFLAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|158424816|ref|YP_001526108.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331705|dbj|BAF89190.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 306 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 95/308 (30%), Gaps = 15/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +I + A GL++V G + ++L + Y IGAY + + G LI Sbjct: 10 LLNGLQFGVILFLVAAGLTLVFGVMDFINLAHGVQYMIGAYLVAVATASTGNFAIGLITG 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ L L + + + + + Sbjct: 70 LFGALVLGVVLETLVFRHLTRKDHLDQVLATFGVILVVTELARIVFGAAPIAFPIPAALS 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ ++Y ++ +L ++ + + RT + R + + Sbjct: 130 GAVTLMP----------GLVYPVWRLVILAAGVGVAVLLWYLVTRTRLGMLVRAGSTHPQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L + + FA + G+AGA I+ ++++GG+ Sbjct: 180 TVAALGVDVDRLFRAVFAFGAVLAGLAGAMAGPLVSV--EPTMGDRILIVAFVVIVIGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLK---FDCSFNMRHTTLMVIALFLVILMR 335 S+ A I+ V L L+ + + + + + V+ R Sbjct: 238 GSIKGAFVAAIIVGLVDTLGRAFAPELLKLLIGRSAAAAAGPALSSMAIYLLMAAVLSFR 297 Query: 336 SHSLLRLR 343 L R Sbjct: 298 PTGLFGGR 305 >gi|296136031|ref|YP_003643273.1| inner-membrane translocator [Thiomonas intermedia K12] gi|295796153|gb|ADG30943.1| inner-membrane translocator [Thiomonas intermedia K12] Length = 289 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 90/305 (29%), Gaps = 27/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A GL++V G L + + Y +G Y L ++ GL W + Sbjct: 8 LFNGLTLGAIYGLVALGLTLVYGVLHVPNFAHGALYMVGGYVAYTLVNKLGLEYWWAMLG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + M+M + +I + L G + Sbjct: 68 AGAVVALLAMLMQALVFAPLRRAPELYNMIGAIGVMLFLEATAQFIWGADFHRLPTP--- 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +++ + FL + L+L R+ + + + + Sbjct: 125 ---------YGQVLEIAGMPFPLQRLLIVVAVLFLVVLLHLFLTRSVTGSTILAMAQDPQ 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+S +A +A + + I+ILGGM Sbjct: 176 GAALVGIDAQRVTYLVFAISGVLAAVAATLYAP--INLLYPTMGNLVIVKAFVIIILGGM 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S I+ + + + L ++ +R Sbjct: 234 GSFPGAILGGLIIGIAESFGGFYVS-------------SDYKDIIAFVLLVAILSVRPQG 280 Query: 339 LLRLR 343 LL R Sbjct: 281 LLTHR 285 >gi|260462821|ref|ZP_05811026.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259031465|gb|EEW32736.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 346 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 132/328 (40%), Gaps = 16/328 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L V+ + + S +++ + L + GL+I+ G G +SL A Sbjct: 18 LAPVLLLAFAYGVVPLIGSSYLFEAILLPFLALSLAGVGLNILTGYAGQVSLGSAAFMAA 77 Query: 77 GAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ R + I ++ +++ A G++ GLPSL+ +G YLA++TL Q Sbjct: 78 GAFAAYNFNLRVEGLPLIGSIVLAGLVAAAIGIVFGLPSLRLKGFYLAVSTLAAQFFVQW 137 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L K+ +N A + + + Y L + + Sbjct: 138 ALTKFSWFSNNSASGVIDAPRL-------------SISGFALDGAVGRYLFALTIVAVLT 184 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + L + + IRDN+ A + ++ KL AFA+SS IG+AG +A A Sbjct: 185 FLAHRLVSSQTGRNFIAIRDNETAARIIGIPVLKTKLLAFAISSFIIGVAGVIWAFAYLR 244 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + PD F + ++ I+I+GG+ S+ A+++ + + + Sbjct: 245 TVEPDGFDLDRSFQILFIIIIGGLASVRGAFFGAALIVVFPLGLSRLGGFLLGDVFDSGV 304 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 +M ++ + L +++ L+ L Sbjct: 305 -LDMSQRIVLGALIILFLILEPDGLVAL 331 >gi|56476957|ref|YP_158546.1| ABC transporter permease protein [Aromatoleum aromaticum EbN1] gi|56313000|emb|CAI07645.1| ABC transporter permease protein [Aromatoleum aromaticum EbN1] Length = 321 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 126/325 (38%), Gaps = 20/325 (6%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 ++ +L +Y+ + + Y + G+ +VVG G + L +G Sbjct: 12 AGMIGLAMLGALALRALGPEYVLAQAAFVFTYAIAGLGVVLVVGQCGQIPLGQGALLGLG 71 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ +L + L +P++ ++ A G LP+ + G Y A++TL + I + L Sbjct: 72 AYAETLLALHGVPAP-LSLPLAIVLGAAGGWFASLPAQRLGGLYFAMSTLAFALIVEEAL 130 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 ++W+ +T G AG+ V + L L+ Sbjct: 131 VRWESLTGGAAGLAVPTMTLGSW---------------SADTAAAQATLSLVALVLAWFA 175 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + + AWR +R+++ A + + AK+ AF + G+AGA +A +S Sbjct: 176 CRRWVASRLGRAWRAVREDETAAAASGIDLGRAKMLAFVLGGGLSGLAGALYAHWIGFVS 235 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ F + + ++ +V +GG L+ ++IG+ + + L Sbjct: 236 PEQFGLALSFELLMLVFIGGARRLAGALWGALVVIGIPQAISLASEVLPPHLAA----AA 291 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 T L + V+++R L Sbjct: 292 GLETLLFGAVVVAVVVLRPEGLAGR 316 >gi|148548195|ref|YP_001268297.1| inner-membrane translocator [Pseudomonas putida F1] gi|148512253|gb|ABQ79113.1| inner-membrane translocator [Pseudomonas putida F1] Length = 355 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 63/337 (18%), Positives = 129/337 (38%), Gaps = 16/337 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L L F+ + + + ++ I L+ + GL+++ G G LSL A+ Sbjct: 27 LGLAALVLFAFIGVPLLGNDYWFSAILIPFLLLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86 Query: 77 GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ L + + + +++ ++ GLPSL+ +G YL ++TL Sbjct: 87 GAFAAYNFELRVAWLPLLASLLLGGLVAALVAVVFGLPSLRIKGFYLLVSTLAAQFFVPW 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L ++ +N A ++ + S Y + L + Sbjct: 147 ALTRFSWFSNDSASGVISAPPLLMAGYDFS-------------SPAGRYMLTLAVVSALF 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254 + L R+ + W +RD A + ++ KL AFA+S ++G+AG+ +A Sbjct: 194 WLGANLVRSELGRNWMAVRDMDTAAAVIGIPLLKTKLLAFAISGFYLGVAGSLWAFTYLG 253 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + P F + + ++ I+I+GG+ S+ A ++ L + L+ Sbjct: 254 TVEPHGFDLNRSFQILFIIIIGGLGSILGNFLGAAFIVLFPVLLSNLAGLLPTGLIDAGQ 313 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 N++ + + ++ L RL R Sbjct: 314 IENLQKMA-FGTLIIIFLIKEPEGLARLWQRFRERTR 349 >gi|260434384|ref|ZP_05788354.1| urea ABC transporter, permease protein UrtC [Synechococcus sp. WH 8109] gi|260412258|gb|EEX05554.1| urea ABC transporter, permease protein UrtC [Synechococcus sp. WH 8109] Length = 375 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 94/344 (27%), Gaps = 31/344 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L+ + ++ + + + ++ + L + A G+ ++ G GLLSL I + Sbjct: 10 WPLIILWVVIVAAIVAAPSVLPVFRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQGIFF 69 Query: 75 AIGAYSYVILGSR------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 A+G Y + A P +L A L Sbjct: 70 ALGGYVAAMYLQLNSSGDLPNGIPEFFGLYGVNRLPAFWEPFHSPLFTLVAIWLVPAVLA 129 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV-----------RSLIRFFRFPSSFV 177 + K + + + + F Sbjct: 130 AVLGNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSP 189 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + +++ + L+ + W+ R + IRD++ K FA+ Sbjct: 190 EMQRGFFWLTSVVVILAWLFLRWVVRGRFGDVLIAIRDDEPRLRFAGYNPTLFKTIVFAI 249 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 + G+ GA + +SP +I ++ V +GG +L ++ L Sbjct: 250 AGGLAGIGGALYTVQSGIVSPQYMTVPFSIEMVIWVAVGGRGTLVGAILGAVVINYAKSL 309 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+ ++ Sbjct: 310 VSE--------------ALPQGWLFIQGGLFILVVTALPEGVIG 339 >gi|257457542|ref|ZP_05622709.1| putative galactoside ABC transporter, permease protein [Treponema vincentii ATCC 35580] gi|257444928|gb|EEV20004.1| putative galactoside ABC transporter, permease protein [Treponema vincentii ATCC 35580] Length = 580 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 36/325 (11%), Positives = 88/325 (27%), Gaps = 15/325 (4%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y I V + G + I ++ Q + + +A G++ ++ G L+ Sbjct: 249 YIAIAIFFVVCIIVAPLSGSGNLLTISNILTILEQSSVRMFYALGVAGLILLAG-TDLSV 307 Query: 71 VIAYAIGAYSYVIL-------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY-- 121 A+GA ++ + +G+ W ++ I + + + + Sbjct: 308 GRMVAMGAVVTGLILHPGQNIVTFFGMGPWDFTAIAMPIRVLLSVSISIILCVVFSAFAG 367 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 A L + + + G ++ + Sbjct: 368 FFSAWLKIHPFISTLATQLIIYGLLFFGTSGTPVGSI-DAGIKDFFGGRWVLGVVNGELV 426 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 +++ A +T + + N +A ++ +S F ++ F Sbjct: 427 TFPKLIIPAVIAIAVAWFIWNKTVLGKNMYAVGGNAEAASVSGISVFKVTMSVFIMAGIF 486 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIV----ILGGMTSLSKIAKATAILIGVVEL 297 G F A + + + + I +V GG+ L + I G+ Sbjct: 487 YGFGAFFEAFKANASAGTGQGYELDAIAACVVGGISFNGGIGKLEGAVRGVIIFTGLTYC 546 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322 + + Sbjct: 547 LTFLGIDTNLQFVFKGFIIIAAVAL 571 >gi|118588205|ref|ZP_01545614.1| branched-chain amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] gi|118438911|gb|EAV45543.1| branched-chain amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] Length = 342 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 103/335 (30%), Gaps = 17/335 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L + +L + + L+ + A+ + + + ++I+ + A GL++V G + +++ Sbjct: 19 LAQKLPVLLVPVLAAVGLIAIGNPASWLTLTVAGLAMGMMIF-IMASGLTVVFGLMDVIN 77 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 A+GA+ + + + + ++ + G + Sbjct: 78 FGHGAFVAVGAFVGFTVLAWLAGWTASPSVFMNLSAVLIAILAAMLVTGLLGLAFERVIV 137 Query: 128 I-MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + ++ + R E + Sbjct: 138 MPVYGEHLKQILVTMGGLIVAQQMIYVVWGPDELHMSRPEALQGSLVIGEAAIEKYRLVA 197 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + L + L+ T I R +N + +L I L F SA G+ G Sbjct: 198 VGIGLALFIGMRHILKNTKIGLLVRAGVENGEMVEALGYRIRRLFLIVFMTGSALAGLGG 257 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + ++ I+ M ++V +VI+GG+ S+ ++ + + Sbjct: 258 VMWGLYQETITAHM-GSEIMVLVFIVVIIGGLGSVEGCFIGAMLVGLLANYTAFLA---- 312 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + +V++ R L Sbjct: 313 ----------PKVALISTIALMVVVLMWRPQGLYP 337 >gi|33594106|ref|NP_881750.1| putative ABC transporter permease protein [Bordetella pertussis Tohama I] gi|33564180|emb|CAE43459.1| putative ABC transporter permease protein [Bordetella pertussis Tohama I] gi|332383522|gb|AEE68369.1| putative ABC transporter permease protein [Bordetella pertussis CS] Length = 333 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 26/326 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + +++ I S + I I + ++GL +VV LG +SL + +A Sbjct: 9 AALLPLAVIVLYLPAWLGGSPAIYSAAVLIAILAVMSYGLDVVVSDLGEVSLGHTVFFAT 68 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY +L +R G W+ + + + + ++GL +L+ R ++ T ++ + + Sbjct: 69 GAYVTALLSTRTGAGAWITLAATIVAALGVSAVVGLVTLRLREFVFSLVTYAVAVVAVTV 128 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 W + + +L S + ++ G+ + Sbjct: 129 AANWAFLGG-----------SDGLRGLPTLDLSVAGLSLTARNDEELWPYAFGLLVVVIY 177 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 +I R + + A + N + +L F S+ AG +A R + Sbjct: 178 LIDRFRHSRLGTAAIMVHQNPRLATMSGIDPARVRLQVFLFSAPISAAAGWLYAYQRAYV 237 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 S D+ + I++++ V+L G L ATA+++ + + L Sbjct: 238 SADILETYFLILMLTAVVLVGRRQLLGPLLATALVLVQEKFFSFGGYVDKIVLGSVLVLV 297 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 L+ L Sbjct: 298 LA---------------FFPQGLMGL 308 >gi|163761454|ref|ZP_02168527.1| branched-chain amino acid ABC transporter, permease protein, putative [Hoeflea phototrophica DFL-43] gi|162281298|gb|EDQ31596.1| branched-chain amino acid ABC transporter, permease protein, putative [Hoeflea phototrophica DFL-43] Length = 385 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 102/365 (27%), Gaps = 36/365 (9%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 +L + +L G + + L + A + +V G G+LSL Sbjct: 12 ILLLAAFTLAVTVLSEGFGIGLVSTSFVKVLGKTLCLCLIAIAMDLVWGYCGILSLGHFA 71 Query: 73 AYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGLPSL 115 + +G Y + +L + + G + + Sbjct: 72 FFGLGGYMIGMWLMYERTKDIVLNSLSSAELPPTPDEVRDAIGTQIFGVVGGSEIPIVWY 131 Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175 +A +++ ++ W + G+Y++ + + + Sbjct: 132 FADSLAAQLALVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDSGLR 191 Query: 176 FV------------------IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + ++ + L + ++ N IRD++ Sbjct: 192 GNNGLSGLQNLPGLTEVPQSVVSVWFFLASALALGLGYVLAAYVVSGKFGNVITAIRDDE 251 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + + KL F +++ +AGA + I+P +I + V +GG Sbjct: 252 TRIRFMGYPVEAYKLVVFTLTAVIAAIAGALYYPQAGIINPAEIAPIASIYLAVWVAIGG 311 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + A++ + G + + L+ LV L + Sbjct: 312 RGRIYGAVIGAALVSLLSSWFTGGQVPSIPLGF-YTVDWVDWWQVLLGFGFVLVTLYAPN 370 Query: 338 SLLRL 342 + L Sbjct: 371 GIGGL 375 >gi|260426225|ref|ZP_05780204.1| branched-chain amino acid ABC transporter, permease protein [Citreicella sp. SE45] gi|260420717|gb|EEX13968.1| branched-chain amino acid ABC transporter, permease protein [Citreicella sp. SE45] Length = 336 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 35/327 (10%), Positives = 84/327 (25%), Gaps = 19/327 (5%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------- 86 + + + A G++++ G L + AIG +++ Sbjct: 10 LANFVLIPAMAYGSQLALGALGVTLIYGILRFSNFAHGDTMAIGTMITILVTWGLQALGV 69 Query: 87 --RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + L IP + + +F + A +++ + I Sbjct: 70 SLSPLPTALLAIPFGIAGTALLVLGTDRLIYRFYREQKAKPVILVIVSMGVMFIYNGLTR 129 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 + + + ++ + A + +L RT Sbjct: 130 FVIGPNDQDFDDGTRFLISARDFKAMTGLDEGLALKSTQAITVVTAVIVVALLFWFLNRT 189 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + R DN+ + + SA +AG + + F Sbjct: 190 RTGKSMRAYSDNEDLALLSGINPERVVTVTWIIVSALAVVAGTLYGLDKSF--KPFTYFQ 247 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSF 316 + + + I+GG+ S I+ + + Sbjct: 248 LLLPIFASAIVGGLGSPLGAIAGGFIIAFSEVGITYAWKKVATYLLPEALEPSGLVQLMS 307 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L +V+L R L + + Sbjct: 308 TDYKFAVSFVILIIVLLFRPTGLFKGK 334 >gi|239991473|ref|ZP_04712137.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] Length = 676 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 105/286 (36%), Gaps = 12/286 (4%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y S+ L + A ++I+ G GL +L +A+GAY+ L + Sbjct: 363 DAYSISLAGSALALGLLAVSVTILTGYAGLPTLGQTAPFAVGAYATANLADAGWTVGPVQ 422 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I +SA+ + ++G ++ RG + + TL + E+ ++ + K +T G G+ Sbjct: 423 IVLSALAAAVFAAVVGPAVIRARGTTVLMITLAIGELTGAVVNQLKSVTGGADGLVGFPA 482 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L + ++ E +Y L + ++ ++ L + R+ R Sbjct: 483 TRAL------------WGGEEMLEESELYNYALVVAVVAVALTLLVLRSPAGKLLTGTRG 530 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + L A + A G+ G+ + +SP F + V++ Sbjct: 531 AEARMRASGHPVGRYLLVAHIGAGALAGVGGSLMVTVQQYLSPADVGFEIAAFALLAVVI 590 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 GG TS+ +++ + G + LL + Sbjct: 591 GGTTSVIGALLGAGLIVATRDWVAGSWPGHGPLLLGVLFVATVYVL 636 Score = 40.2 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 78/272 (28%), Gaps = 13/272 (4%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 L+ + A GLS+ G+ G+L+L+ YAIGAY+ L + L + + Sbjct: 19 LLLFVVAAGLSLAFGTAGVLNLSHGTLYAIGAYTGAELSDGTWGGLALGLAAGTAAACVA 78 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 G + + L+ + T+ Sbjct: 79 GAGLSAATAPLARRGHLAQALLTFGLALIGGDLLIQFFGADELPVRVPEALDSSVTLLGH 138 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 Y + ++ L+A L RT + A R D+ + + + Sbjct: 139 R-----------YPAYRLCFIVMAVLLAAFGTWVLTRTRMGAAVRAAADDPQMLAATGHS 187 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 A + A G AG A +V+ ++ + SL Sbjct: 188 PRAVHTGVLAAAGALAGAAGVLGAPIIGPGPGTSENVLMLSLVVVVLGG--LRSLWATFF 245 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 A + V L + LL + + Sbjct: 246 AAVAVGEVQTLGVSVAPELAPYLLFAAMAAVL 277 >gi|332525961|ref|ZP_08402102.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] gi|332109512|gb|EGJ10435.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2] Length = 412 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 108/312 (34%), Gaps = 17/312 (5%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 ++ L L+ ++ QI I ++ ++++G G+LS Sbjct: 4 RRVRAALVWGAYALVLAGAPWLFDSSLALTLLSQIGIAIVACLAFNLLLGQGGMLSFGHA 63 Query: 72 IAYAIGAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + +GAY+ ++ L + L+ V + A +G + + G A+ T Sbjct: 64 VYSGLGAYAAIHTLRWMVAGELALPVSLVPLVGGLGGLAGAATLGWLTTRTAGTPFAMIT 123 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L + E+ + + + + G+ G+ + +Y + Sbjct: 124 LGLGELVAAVALMFPTVFGGEGGLS------------ADRVIGEPVWGISFGPAWQVYAL 171 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + CF+ + + RT + +RDN + + + AF VS F+G+AG Sbjct: 172 IAVYCFVCTAAMYGFTRTPLGRMLNAVRDNPLRAEFVGYSARRVRYRAFLVSGFFMGVAG 231 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A + +S ++ + + +LGG + +++ L + + Sbjct: 232 GLAALHFEIVSAEVLGSLRSGAYLLFTVLGGSGYFAGPILGAVLMVLAGVLLSALTRAWL 291 Query: 307 NSLLKFDCSFNM 318 L + M Sbjct: 292 LYLGLAFIAVVM 303 >gi|300693057|ref|YP_003749030.1| high-affinity branched-chain leucine/isoleucine/valine transporter subunit protein (ABC superfamily, membrane) [Ralstonia solanacearum PSI07] gi|299075094|emb|CBJ34376.1| high-affinity branched-chain leucine/isoleucine/valine transporter subunit protein (ABC superfamily, membrane) [Ralstonia solanacearum PSI07] Length = 293 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 114/305 (37%), Gaps = 26/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y +FA G ++V G LG+++L+ + +GAY+ + + + + L +W + V Sbjct: 6 LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQVVTHFELPLWAALLV 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +SG G+++ + R + + +I + + G + L Sbjct: 66 GFAVSGVAGLVIDVVLLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAENLRFPAGL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + I +++ L A+++L L+RT + A R I ++ Sbjct: 126 VSDASLDLGGIHLTPLELG----------IIVLSFVLMAALMLLLKRTQLGRALRAIAES 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 KA L + L ++A G+AG + + P M + + + +++ILG Sbjct: 176 PKAAALLGIHVEGLFLLTSFAAAALGGLAGVLIGLYSNAVFPLMGQPMLHKGI-AVIILG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ + L L + F LFL++L+R Sbjct: 235 GLGDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRP 281 Query: 337 HSLLR 341 L Sbjct: 282 QGLFG 286 >gi|226355571|ref|YP_002785311.1| branched-chain amino acid ABC transporter permease [Deinococcus deserti VCD115] gi|226317561|gb|ACO45557.1| putative branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] Length = 309 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 121/310 (39%), Gaps = 45/310 (14%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----------GLS 91 + + +L + L + G LSL YA+G Y I+ + Sbjct: 11 LIVTLLQAGLLGLSLYFPL-QAGQLSLASPGFYALGGYVAAIMLTHPTFAGIRDALGHGV 69 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L V+A++SG G+++G+P+L+ RG YLA+AT+ EI + + + + IT G GI+ Sbjct: 70 FPLTWLVAALLSGVLGLVVGIPALRLRGIYLALATIAFVEILRVLSLNLQ-ITGGAIGIF 128 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + + ++ + L+ L R+ + A R Sbjct: 129 GIPQAFGFQDRWQ------------------YVFLFGPLLVLTLLFAYQLERSRVGRALR 170 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IR+++ A ++ K+ AF + + G+ G+ A + + F +I +++ Sbjct: 171 AIREDELAADAMGVPPTRYKVLAFVIGAVLAGIVGSMSAPFLNTWNAKQGTFDASIAILA 230 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 V++GG ++ A+L V E+ + + + + L + Sbjct: 231 FVLIGGSRNIWGPVVGGALLTAVPEVLRFL---------------SDWRLIINGLVLVVA 275 Query: 332 ILMRSHSLLR 341 L ++ Sbjct: 276 SLYLPQGIVG 285 >gi|254461982|ref|ZP_05075398.1| ABC transporter, permease/ATP-binding protein [Rhodobacterales bacterium HTCC2083] gi|206678571|gb|EDZ43058.1| ABC transporter, permease/ATP-binding protein [Rhodobacteraceae bacterium HTCC2083] Length = 431 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 112/336 (33%), Gaps = 23/336 (6%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 R+ + L+ + + + + ++ Q+ I V+FA ++++G G+L Sbjct: 15 RMRAGSMTMTLMPWILAAGALMLMPFIFTSSSALTIMNQMWITVIFALAYNMLLGQGGML 74 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S + +G ++ + + + +PV + G G + + F Sbjct: 75 SFGHAVYAGVGGFACMHIMNASDFFASFPLPVLPVFGGIFGAGLAMIVGSFSTRSAGTVF 134 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 ++S ++ + + + F + + +I +YY+ Sbjct: 135 AMISLGVGELI--------AASSVIIVAFFGGEEGISGDRTYAMPFFGNEFLQQINVYYL 186 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 LSA+++ RT + +RDN + L + + + +F S F G+AG Sbjct: 187 TSFWVLLSAALMYLWSRTPVGRMANAVRDNPERAEFLGYSARWVRYYSFVASGFFAGIAG 246 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 FA + + ++ + + + +++ + LGG+ + V + + Sbjct: 247 GLFAINYEIVTEENLNTASSGVILLVTFLGGVGFFFGPIIGAIVFTLVQTVLSLQTELW- 305 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ L L Sbjct: 306 --------------AFYAGSLFLATVMFFPGGLAGL 327 >gi|253827373|ref|ZP_04870258.1| ABC transporter, permease protein [Helicobacter canadensis MIT 98-5491] gi|253510779|gb|EES89438.1| ABC transporter, permease protein [Helicobacter canadensis MIT 98-5491] Length = 293 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 93/290 (32%), Gaps = 11/290 (3%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + +Y + A G ++V G L L++ +GA+ S GL + + + Sbjct: 5 INGLSLGSMYALIAIGYTMVYGCLRLINFAHADIIMVGAFLSFFAVSSLGLPFYASVIFA 64 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +I G+ + + I+ LI + L + G + + +F Sbjct: 65 VVICMILGVGIDRVAYLPLRSAPRISMLITAIGVSFFLENLFNVLFGSTPRFFSSPEFFA 124 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 T F S + V + L +++ +L RT A R + Sbjct: 125 KT----------FNFSNISITYITIIVPIVTLILLVALLQFLYRTKQGMAIRATAFDINT 174 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + F + SA G+ G F+A S I P M + + +LGG+ Sbjct: 175 VRLMGINVNNIIGLVFVIGSALAGIGGIFYAISYPTIDPLM-GIMIGLKAFAAAVLGGIG 233 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 S+ IL + + F F + + + Sbjct: 234 SVGGAVLGGFILGFTEVMAVAVFPELGGYKDAFAFLFLILVLLFRPVGIM 283 >gi|84502499|ref|ZP_01000635.1| amino acid ABC transporter permease protein [Oceanicola batsensis HTCC2597] gi|84389311|gb|EAQ02108.1| amino acid ABC transporter permease protein [Oceanicola batsensis HTCC2597] Length = 294 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 90/296 (30%), Gaps = 26/296 (8%) Query: 48 IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107 +Y + A GL+++ G +++ +G Y+ L + G++ + P+ A+ G Sbjct: 17 VYALAALGLNLIFGVAKIVNFAHGEFMMLGMYAGFWLMTLTGINPYWGSPLIAVAFFVVG 76 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 ++F + + + L + T Sbjct: 77 AAFYWGVMRFTIYSTELTQVFATLGMSIALQNLALVMFSAD----------YRTIQTMPD 126 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 FV L + +IL+LRRT A + + A + Sbjct: 127 GRSSIDFGFVHLSSDRVIAFLFAIAIFVGVILFLRRTFTGRAIEAVSQDLMAARLMGINT 186 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 L F + G+AGA S +I +V+LGG+ S++ Sbjct: 187 QKIFLITFGLGIGITGVAGAVLVPSFYA--FPSVGTFFVLIAFVVVVLGGLGSVTGTMIG 244 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 L + + + I L L++ +R +L ++ Sbjct: 245 GLSLGLIESYVGYFSPDLKEATH--------------FILLILLLAVRPQGILGVK 286 >gi|114763544|ref|ZP_01442949.1| ABC-type transport system permease protein II (probable substrates urea/short chain-amides) [Pelagibaca bermudensis HTCC2601] gi|114543824|gb|EAU46836.1| ABC-type transport system permease protein II (probable substrates urea/short chain-amides) [Roseovarius sp. HTCC2601] Length = 346 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 112/331 (33%), Gaps = 19/331 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L +F+ + Q ++ +FA L + G G+LS + +GA Sbjct: 13 VMVAIGLAVMFIAPVMLDLFTIMQITQYVVLSVFALSLGYIWGFGGILSFGQAAFFGLGA 72 Query: 79 YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 Y++ + +I +++ + + + YL + TL+++ IF ++ Sbjct: 73 YTFAVASINMGSTTIPMVLAFVIPTLFGAALGYFMFYGRLSDVYLGVVTLVVALIFWKLI 132 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 G + RL S + M+ V +G + Sbjct: 133 NHTA----GPEYSIGSARLGGFNGIPSIPTLHVPGDPSAWLDPGQMFQVFMGFLLVIYVA 188 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + +L + +IR+N+ L + K+ FA+ G+AGA +A + I Sbjct: 189 LRFLIASDFGRVSISIRENETRSSLLGYDVRKHKVIVFAIGGGIAGIAGAMWATYQAFID 248 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P+ + + V+ GG+ +L +L + L+ Sbjct: 249 PNSVSMEMSAKALVWVMAGGVGTLVGPIIGCILLQWLT--------------LQLGTVDV 294 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + ++ + +++L ++ Sbjct: 295 VNSIAVLGAIMMVLVLALPKGIVPTARSLLL 325 >gi|283835850|ref|ZP_06355591.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Citrobacter youngae ATCC 29220] gi|291068021|gb|EFE06130.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Citrobacter youngae ATCC 29220] Length = 308 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ L++R + + A Sbjct: 129 ----RDVALPSLFNGQWTVGSSENFSASITTMQLVIWIVTFLAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|256043827|ref|ZP_05446748.1| hypothetical protein Bmelb1R_04996 [Brucella melitensis bv. 1 str. Rev.1] gi|260565007|ref|ZP_05835492.1| branched-chain amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|265990251|ref|ZP_06102808.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1] gi|260152650|gb|EEW87743.1| branched-chain amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|263000920|gb|EEZ13610.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1] Length = 331 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 25 LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 81 GAAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328 >gi|269127446|ref|YP_003300816.1| urea ABC transporter permease protein UrtB [Thermomonospora curvata DSM 43183] gi|268312404|gb|ACY98778.1| urea ABC transporter, permease protein UrtB [Thermomonospora curvata DSM 43183] Length = 292 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 89/305 (29%), Gaps = 25/305 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ A GL+ G +G++++ +GAY+ +L G + A Sbjct: 12 LSIGAVLLLIALGLTFTFGQMGVINMAHGEFIMVGAYTAYMLQDWAGTQAAAVALPVAFA 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + TL+++ +L + G + V + G Sbjct: 72 LAGAMGWVLERAAIRHFYGRPLDTLLLTWGVSLVLQQAARDIFGAPNVQVVAPTWLSG-- 129 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + +++ I L++ R+A R + N++ Sbjct: 130 --------GVHIGGTVIPYNRLFIMALAAVCVVGIWLYMNRSAQGRRMRAVMQNRRLAAC 181 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 F + S G+AG A + + +V++GG+ L Sbjct: 182 SGVATGRVDQLTFFIGSGLAGVAGV--ALTLIGPVGPSLGTYYIVDAFLVVVVGGLGQLR 239 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A L + ++ A+ + +R + L Sbjct: 240 GAVLAALALGMLNSFAEFWTNASLAK-------------VIVFAAIVAFLQLRPQGMFVL 286 Query: 343 RTPSN 347 R+ + Sbjct: 287 RSRAL 291 >gi|126724489|ref|ZP_01740332.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2150] gi|126705653|gb|EBA04743.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2150] Length = 336 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 33/332 (9%), Positives = 87/332 (26%), Gaps = 19/332 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 L S + + A G+++V G L + A G ++ Sbjct: 3 LLNAFTLLSNFVLVPAIAYGSQLALGALGITLVFGILRFSNFAHGDTMAFGTMVVILFTW 62 Query: 87 RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + L +P+ + A ++ KF A + + + Sbjct: 63 MFQSMGISLGPLPTALLALPIGMVFCAAFVLLSDRVVYKFYRAKKAAPVVYLIASVGVMF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + + + ++ ++ + A + Sbjct: 123 VMNGVVRLIIGPDDQRFADGERFIIKARTFKQMTGLNEGLSIKVSQGLTVVTAIIVVAVL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L RT + R DN+ + +++ +AG + + Sbjct: 183 FWFLNRTRTGKSMRAYSDNEDLALLSGINPEKVVAVTWILAAFLATIAGTLYGLDKSY-- 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV--------ELCCGMNFYYFNSL 309 F + + + I+GG+ S ++ + + + Sbjct: 241 KPFTYFQLLLPIFAAAIVGGLGSPLGAITGGFVVAFSEIMITYPYKKFIAYLGPKDWAPE 300 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + L +V+L++ L Sbjct: 301 GLLQLLSTDYKFAVSFVILVVVLLIKPTGLFG 332 >gi|22299222|ref|NP_682469.1| branched-chain amino acid ABC transporter permease protein [Thermosynechococcus elongatus BP-1] gi|22295404|dbj|BAC09231.1| branched-chain amino acid ABC transporter permease protein [Thermosynechococcus elongatus BP-1] Length = 311 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 97/311 (31%), Gaps = 23/311 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90 + +Y +FA G ++V LG+++ +A+GAY + G Sbjct: 9 LVDGLATGSVYAIFALGYTLVFSILGIINFAHGAVFALGAYLTYALLGGRFGFNGLLANG 68 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +P + ++ + L + + + + + Sbjct: 69 QLPVALPFAPALALSALGCGLLGVGIDWIVFRPLRQQGTDTLLTVVASLGAAVFLTNLIQ 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 Y+ + + + L ++ W++ T + Sbjct: 129 YLVGAEVYTYPDQLWGGLPLTLQWGDITLRTSQLIIFAVAVVLMIALTYWVKGTRMGKGL 188 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 + + +N A L F VSSA +AG A S I+ F + + Sbjct: 189 QAVAENPTAATLLGIDGDRIIQVTFFVSSALAAVAGTLIALSVG-ITGPQFGVIFGLKGL 247 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++++LGG+ SL A +L V + + + LFL Sbjct: 248 AVIVLGGLGSLPGTMLAGFLLGLVEAMV--------------PAAASGFRDAAAFAILFL 293 Query: 331 VILMRSHSLLR 341 V+L R LL Sbjct: 294 VLLARPQGLLG 304 >gi|84684272|ref|ZP_01012174.1| probable amino acid transport system permease lipoprotein transmembrane [Maritimibacter alkaliphilus HTCC2654] gi|84668025|gb|EAQ14493.1| probable amino acid transport system permease lipoprotein transmembrane [Rhodobacterales bacterium HTCC2654] Length = 420 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 103/330 (31%), Gaps = 35/330 (10%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ + + ++ Q+ I ++FA ++++G GLLS + + G Y Sbjct: 26 ILIFAACLAAIPMVGPSRTFYTIAHQMGINIVFALSYNMILGKGGLLSFGHAVYFGFGGY 85 Query: 80 SYVILGSRYG--------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + ++ L V G I+G PS + G A+ +L ++E Sbjct: 86 VAMHAMNWIEDGSGLWAGFPVFFLPLVGFAGGALAGAIIGWPSCRKAGTTFAMISLGVAE 145 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + + G+ GI + + +Y+ + Sbjct: 146 LVFAAAFMFDSFFGGEQGIS------------GDRMNGVELFGLSMGPISEVYWFIAFWT 193 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + + RT + RDN + + + F + F G+AG A Sbjct: 194 VVGLVGMWAFTRTPLGKLSEATRDNAQRVQFIGYNPQRVRYLVFIFAGGFAGLAGGMAAV 253 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + + +PD + V+ + +GG+T +L + + + Sbjct: 254 NYEIFTPDAMSLVPSGFVLIMAYVGGITYFVGPIFGAILLTYMQSMLSDFTEAW------ 307 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + +++ + Sbjct: 308 ---------LLYLGVLFIAIVMFAPRGIAG 328 >gi|317402682|gb|EFV83235.1| inner-membrane translocator [Achromobacter xylosoxidans C54] Length = 306 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 95/308 (30%), Gaps = 15/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL++V G + +++L Y GAY R G ++ Sbjct: 10 LLNGLQFGLMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRTGSFTAAVLVA 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + L + + +L + I + + Sbjct: 70 AVATGLVGVALELTLIRR----------LALRDHLAQVLGTYAVILIANDLVKMIWGPAP 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +L+ ++Y + +++ + + ++ RT R N++ Sbjct: 120 VMLNMPALLSGPVRLLPDLLYPAYRLMIIVFGVASAVGLYWFVTRTRAGVLVRAGASNRQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + L F + + +AGA I+V+ +++GG+ Sbjct: 180 MATLMGVRVPLLFLGVFVLGAMLAAVAGALLGPITSV--QVGMGEEILILVLVCIVIGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335 S+ ++ V + + + + + V++ R Sbjct: 238 GSIRGAFVGALLVGMVDTAGRAFLPMLLRQVFSPAVASSVGPTLAAIAIYVLMAAVLVFR 297 Query: 336 SHSLLRLR 343 L R Sbjct: 298 PSGLFPAR 305 >gi|170748667|ref|YP_001754927.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] gi|170655189|gb|ACB24244.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] Length = 305 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 94/313 (30%), Gaps = 30/313 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + + + + + S Sbjct: 8 LINGLTLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFMVSCFIALITFLLLTVWLGVSSIA 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L+ +++ V+ ++ G + + + +A LI + L + + G Sbjct: 68 LAFLVVLVVAMALTALWGWAIERVAYRPLRGSFRLAPLISAIGVSIFLSNFVQVVQGARN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 L T V+ +L ++RT A Sbjct: 128 KPTPPMLSGGITLFERDGYAVFLAWKQVLIMAVTAVLL-------TGFWYLVQRTPFGRA 180 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + +A +AG + +S F + Sbjct: 181 QRACEQDRKMAALLGIDVDRTISLTFVLGAALAAVAGVLYLMYYGVVSF-SDGFVPGVKA 239 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL I+ + + + F L Sbjct: 240 FTAAVLGGIGSLPGAVLGGLIIGLIETFWSAYFSIEYKDVAAFS-------------ILA 286 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 287 IVLIFMPSGILGR 299 >gi|86360217|ref|YP_472106.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86284319|gb|ABC93379.1| probable sugar ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 749 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 108/339 (31%), Gaps = 38/339 (11%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 ++I + LL + ++ L + ++ + + + A G ++V+ Sbjct: 437 LNIVRSAFRNPPLLTFLLVALVWIVASFTLRGFGAYGHLRYLLELAAVIGIVAAGQTLVI 496 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 +G + L+ + A ++ + + I + I+ G++ G + R Sbjct: 497 -LMGGIDLSVGAVITVTAILLPLISPAWDPTGLAGIAAALAIATGIGLMNGAGATYLRVP 555 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 +IM+ L I G + + V++ + R L Sbjct: 556 P-----IIMTLAMATFLQGLLIIVAGGSAVTVSNPAVIMLGQARPLGIPSG--------- 601 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 ++ ++ ++L + R I + + N A ++ + A +S Sbjct: 602 ------IILWVAVAVVVLLLVHRMPIGARFLALGANPLAARLSGVSVTRNTVIAHTLSGF 655 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVV 295 F G+ G + + + ++V ILGG + + +L+ Sbjct: 656 FAGLTGILVLGMNRQGYVGIGDPYLLTSIAAVVLGGTSILGGRGTYAGTIPGAILLVTAT 715 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 L +N + + + + ++L+ Sbjct: 716 ALITVVN------------ASPGWRSIMFGTLILALLLV 742 >gi|51891960|ref|YP_074651.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51855649|dbj|BAD39807.1| branched-chain amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 295 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 98/303 (32%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ +GA+ R ++ Sbjct: 8 VVNGLQLGFVYALIAVGYTMVYGIIKLINFAHGDVIMVGAFVTFFGLVRGIPWPAAILTG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A + +I L R +++ I ++ ++ G Sbjct: 68 MATCALLGVVIERLAYRPLRVKGAPRIAALITAIGVSLFLENFASLRIAFG--------P 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +++ ++ V + L + L + RT I A R + + Sbjct: 120 DHRQFPAMVTRLQWNVFGVTISSVQVLIAGVTIVLVLILQLVVYRTKIGKAMRAVALDLD 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA AGA +AA+ +I P M + + +LGG+ Sbjct: 180 AARLMGINVDRVIAFTFAIGSALAAAAGALWAAAYPQIWPYM-GIPPGLKAFTAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ L F + F L LV+L+R Sbjct: 239 GSIPGALLGAVLMGQAEVLTAAYITTDFRDAVAF-------------ALLILVLLVRPAG 285 Query: 339 LLR 341 LL Sbjct: 286 LLG 288 >gi|225628510|ref|ZP_03786544.1| branched-chain amino acid ABC transporter, permease protein [Brucella ceti str. Cudo] gi|254706410|ref|ZP_05168238.1| Bacterial inner-membrane translocator [Brucella pinnipedialis M163/99/10] gi|254711300|ref|ZP_05173111.1| Bacterial inner-membrane translocator [Brucella pinnipedialis B2/94] gi|254720718|ref|ZP_05182529.1| Bacterial inner-membrane translocator [Brucella sp. 83/13] gi|256030070|ref|ZP_05443684.1| Bacterial inner-membrane translocator [Brucella pinnipedialis M292/94/1] gi|256158242|ref|ZP_05456151.1| Bacterial inner-membrane translocator [Brucella ceti M490/95/1] gi|256252817|ref|ZP_05458353.1| Bacterial inner-membrane translocator [Brucella ceti B1/94] gi|260166879|ref|ZP_05753690.1| Bacterial inner-membrane translocator [Brucella sp. F5/99] gi|261219898|ref|ZP_05934179.1| inner-membrane translocator [Brucella ceti B1/94] gi|261313861|ref|ZP_05953058.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10] gi|261318899|ref|ZP_05958096.1| inner-membrane translocator [Brucella pinnipedialis B2/94] gi|261756259|ref|ZP_05999968.1| bacterial inner-membrane translocator [Brucella sp. F5/99] gi|265985770|ref|ZP_06098505.1| inner-membrane translocator [Brucella sp. 83/13] gi|265987098|ref|ZP_06099655.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1] gi|265996759|ref|ZP_06109316.1| inner-membrane translocator [Brucella ceti M490/95/1] gi|306839329|ref|ZP_07472145.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. NF 2653] gi|225616356|gb|EEH13404.1| branched-chain amino acid ABC transporter, permease protein [Brucella ceti str. Cudo] gi|260918482|gb|EEX85135.1| inner-membrane translocator [Brucella ceti B1/94] gi|261298122|gb|EEY01619.1| inner-membrane translocator [Brucella pinnipedialis B2/94] gi|261302887|gb|EEY06384.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10] gi|261736243|gb|EEY24239.1| bacterial inner-membrane translocator [Brucella sp. F5/99] gi|262551056|gb|EEZ07217.1| inner-membrane translocator [Brucella ceti M490/95/1] gi|264659295|gb|EEZ29556.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1] gi|264664362|gb|EEZ34623.1| inner-membrane translocator [Brucella sp. 83/13] gi|306405577|gb|EFM61840.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. NF 2653] Length = 406 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 106/311 (34%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +YY+ L S ++ L T Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|146341003|ref|YP_001206051.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146193809|emb|CAL77826.1| Putative Branched-chain amino acid ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 350 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 98/293 (33%), Gaps = 3/293 (1%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 ++K ++ A + + + + + + + A L+ + G G+LS Sbjct: 1 MDKRLRLALQAAGTVVAVGVIAIVPSVIELFGLMQLTLFAAMSVLALSLAFIWGYGGILS 60 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + +G Y+Y I + S I ++ ++ I+G R + + + Sbjct: 61 FGQTAFFGLGGYAYAIAAVNFQDSTP-AILLAIVVPALFAAILGYFIFFGRISDVYLGVI 119 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ IL T+G A L F S V+ ++ Sbjct: 120 TLTVTL--ILFNSVNSTSGDAYKIGKALLGGFNGMPAVPTFNVPFDPSTVLSPEQSWWTT 177 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + ++ L +R+N+ L K F + A G+AGA Sbjct: 178 AYVLLGVFLLLRLLLALPAGRIIVAVRENEVRASLLGYDPRLVKCLTFILGGAIAGLAGA 237 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 + +SP +F S + +I + +GG+ +L ++ +V Sbjct: 238 LYVNWGAFVSPTIFSLSLSAEIIIWITVGGLGTLLGPIIGCVVIEYIVAYIGS 290 >gi|330958779|gb|EGH59039.1| inner-membrane translocator [Pseudomonas syringae pv. maculicola str. ES4326] Length = 300 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+IV G +G++++ A+G+Y+ + + L+ +I Sbjct: 14 FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSVVFQRYFPELMGWYFII 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + + +L W + + Sbjct: 74 GIGVAFVVTFAFGFLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ S + + +++ ++A++ L+L R+ R + N+ + Sbjct: 132 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AG+ F + + + +V+ GG+ SL Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + +++ R + L Sbjct: 250 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296 Query: 343 R 343 + Sbjct: 297 K 297 >gi|297616858|ref|YP_003702017.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM 12680] gi|297144695|gb|ADI01452.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM 12680] Length = 291 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 100/304 (32%), Gaps = 26/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G + L++ Y GA++ + L + +++++ + Sbjct: 6 LVNGLTLGSTYALIALGYTMVYGIIQLINFAHGEIYMFGAFAGLFLVTVLQVNVFVAMTG 65 Query: 99 SAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + G+++ + RG ++ LI + L + +G Sbjct: 66 AMIFCMVLGVLVERIAYRPLRGRSSRLSALISAIGVSIFLSTLMVLMHGPETERYP---- 121 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 ++ F + +L+ L + L++ RT + A R + Sbjct: 122 -------DTVKIASFHVGTIQVSSLQVIILVVTAVLMIWLQLFIHRTRLGKAMRACSQDL 174 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A + + FA+ SA G + + P M + + +LGG Sbjct: 175 DAAALMGVDVNRVISFTFALGSALAAAGGVMVGLYYNAVWPYM-GLMAGLKAFAAAVLGG 233 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ L + + + F L LV+++R Sbjct: 234 IGSIPGAMLGGISLGIMEIFGVAYLSSSYRDAIAFG-------------ILILVLIVRPQ 280 Query: 338 SLLR 341 +L Sbjct: 281 GILG 284 >gi|62316986|ref|YP_222839.1| branched-chain amino acid ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|83268981|ref|YP_418272.1| inner-membrane translocator [Brucella melitensis biovar Abortus 2308] gi|189022258|ref|YP_001931999.1| Bacterial inner-membrane translocator [Brucella abortus S19] gi|237816549|ref|ZP_04595541.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|254691527|ref|ZP_05154781.1| Bacterial inner-membrane translocator [Brucella abortus bv. 6 str. 870] gi|254698276|ref|ZP_05160104.1| Bacterial inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] gi|254731718|ref|ZP_05190296.1| Bacterial inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|256256712|ref|ZP_05462248.1| Bacterial inner-membrane translocator [Brucella abortus bv. 9 str. C68] gi|260544225|ref|ZP_05820046.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038] gi|260757152|ref|ZP_05869500.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870] gi|260759478|ref|ZP_05871826.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|260762722|ref|ZP_05875054.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] gi|260882961|ref|ZP_05894575.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68] gi|297250071|ref|ZP_06933772.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|62197179|gb|AAX75478.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82939255|emb|CAJ12191.1| Bacterial inner-membrane translocator [Brucella melitensis biovar Abortus 2308] gi|189020832|gb|ACD73553.1| Bacterial inner-membrane translocator [Brucella abortus S19] gi|237787362|gb|EEP61578.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|260097496|gb|EEW81370.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038] gi|260669796|gb|EEX56736.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|260673143|gb|EEX59964.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] gi|260677260|gb|EEX64081.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870] gi|260872489|gb|EEX79558.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68] gi|297173940|gb|EFH33304.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] Length = 406 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 107/311 (34%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHVMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +YY+ L S ++ L T Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|294339507|emb|CAZ87866.1| putative ABC-type branched-chain amino acid transport system, permease component [Thiomonas sp. 3As] Length = 293 Score = 73.4 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 97/299 (32%), Gaps = 23/299 (7%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 + + GL+++ G + +++L +GAY+ ++ +G + +P + + G Sbjct: 18 FSLIGIGLNLIFGVMRIINLAHGQFIVLGAYAAWLVSRHFGFNPLWGVPTVIVAAIVIGY 77 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + + L F + + +T G + + Sbjct: 78 PLYYAVVPRLQRSGDPEMLSFILFF-GVGQMLEALTGLGFGADQRSLPSEALGSGNLGVF 136 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 FP S+ ++ ++ L+ RT + A R I +++ + + Sbjct: 137 GQEFPDSW-------WWAAGVSIAAIVALWLYFTRTRLGYATRAIMASREEALATGINVN 189 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 AF A G+AG F +SPD S +IVI+G + + Sbjct: 190 KVSALAFVAGLALAGVAGVFLPYLLGSVSPD-LGDSLTTTSFAIVIIGSLGNPLGTIIGG 248 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L + N + + L +++L+R LL S Sbjct: 249 LVFGLGTMLMQTYYSSWSN--------------LVPYVLLLVIVLIRPTGLLGKAVRSV 293 >gi|288932495|ref|YP_003436555.1| branched-chain amino acid ABC transporter permease [Ferroglobus placidus DSM 10642] gi|288894743|gb|ADC66280.1| inner-membrane translocator [Ferroglobus placidus DSM 10642] Length = 348 Score = 73.4 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 108/324 (33%), Gaps = 23/324 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + ++ + +Y + A L+I G G+ + A IGA + + +R +++ + V Sbjct: 7 LVTILLWFGVYAIVAISLNIEYGYGGIPNFGRAFAVLIGALAVGAIVNRIFIALTGVSGV 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + Y + L + + + + + +D L Sbjct: 67 TYSAASGFAKSKIDALISSNPAYGILILLFCVALAAVLGAIFGAMFILPSAKLKSDYLAI 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIF-------------------MYYVLLGMCFLSASIIL 199 + + + ++ ++ + ++L L + Sbjct: 127 TLLAISEVSFIVSYYNTDIVGGYYGTPTPNVLAFVPGESREIAYTILILIFAALVFLLAE 186 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L + + +R+++ S ++ ++ A+ S+ + GA + +S Sbjct: 187 RLMNSPYGRLLKAMREDEDVVESFGKDVMRIRIKTVALGSSLAAIVGALYTLYAGNVSGV 246 Query: 260 MFKFS---ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + F+ +V+LGGM + + T + + V L + +LL Sbjct: 247 VNLFARVNWTFYPFLMVLLGGMANNRGVLAGTFLFVAVWRLLDQY-KHEIAALLNLPFDV 305 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 N + + LV+ + L+ Sbjct: 306 NWLQYIIFGALMILVLYYKPEGLI 329 >gi|83749024|ref|ZP_00946031.1| LivH [Ralstonia solanacearum UW551] gi|83724287|gb|EAP71458.1| LivH [Ralstonia solanacearum UW551] Length = 342 Score = 73.4 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 110/321 (34%), Gaps = 27/321 (8%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + L+ M + GL+++ +G+L+ Y +GAY ++ W + Sbjct: 34 NLLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVISVHL--GFWSALI 91 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + ++ GA G ++ L+ Y +A L+ + ++ + + G L Sbjct: 92 AAPLLVGALGALVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 142 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + V + F + + +++L + I L L RT I + + Sbjct: 143 AVPYRVPEALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 202 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +L + + F A G+AG ++ + IV + ++GG Sbjct: 203 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 260 Query: 278 MTSLSKIAKATAILIGVVEL--------------CCGMNFYYFNSLLKFDCSFNMRHTTL 323 M SL A+ ++ + + + ++ + L Sbjct: 261 MGSLVGAFIASLLIGCIQTFAVTLDLSVASLLGKLGVVLNPDVPLISVWNLTIAQVAPVL 320 Query: 324 MVIALFLVILMRSHSLLRLRT 344 + L L+++ R L+ R Sbjct: 321 PYLLLVLMLIFRPRGLMGTRE 341 >gi|294083918|ref|YP_003550675.1| inner-membrane translocator [Candidatus Puniceispirillum marinum IMCC1322] gi|292663490|gb|ADE38591.1| inner-membrane translocator [Candidatus Puniceispirillum marinum IMCC1322] Length = 279 Score = 73.4 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 70/306 (22%), Positives = 127/306 (41%), Gaps = 37/306 (12%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + + I ++FA L+++ G G +SL IGAY+ IL + + Sbjct: 2 TYEIVVLTNMAISILFALSLNVITGFCGQVSLGHAAFLGIGAYTSAILSKAGIP-LIITF 60 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++G G+I+G+ SL+ R D+LAI T+ + +F I+ K + I G+ GI Sbjct: 61 IPAMGMAGLVGLIVGIASLRVRHDFLAITTMGVVFLFTGIVRK-QEILGGEIGIAGIPAP 119 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F + + + +W+ ++ A+ +I ++ Sbjct: 120 DFGR--------------------LGLLVLSFLCVLAYLFFTIWISKSWTGFAFDSIAED 159 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L + KL AF V +A G+AGA +A I PD F F E+I V+++VI+G Sbjct: 160 EDTARLLGINVPKFKLFAFVVGTAGAGLAGALYAHQVRFIGPDSFGFVESISVLAMVIVG 219 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ + A A L + + ++ Y + + LF + Sbjct: 220 GIGSIWGVILAAAFLSVLPQFFQVIDDY---------------KLLVYGLLLFGAMRFAP 264 Query: 337 HSLLRL 342 + L Sbjct: 265 DGVDGL 270 >gi|225686717|ref|YP_002734689.1| inner-membrane translocator [Brucella melitensis ATCC 23457] gi|256262149|ref|ZP_05464681.1| branched-chain amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|225642822|gb|ACO02735.1| inner-membrane translocator [Brucella melitensis ATCC 23457] gi|263091850|gb|EEZ16172.1| branched-chain amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|326411116|gb|ADZ68180.1| inner-membrane translocator [Brucella melitensis M28] gi|326554407|gb|ADZ89046.1| inner-membrane translocator [Brucella melitensis M5-90] Length = 331 Score = 73.4 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 127/328 (38%), Gaps = 33/328 (10%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 25 LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 81 GAAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 T + + +L+ ++ Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGE 319 >gi|328545195|ref|YP_004305304.1| Hydrophobic amino acid ABC transporter (HAAT) family, permease [polymorphum gilvum SL003B-26A1] gi|326414937|gb|ADZ72000.1| Hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Polymorphum gilvum SL003B-26A1] Length = 290 Score = 73.4 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 102/310 (32%), Gaps = 27/310 (8%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y+ + IY + A G++++ L L +GA+ + + +G+ Sbjct: 6 LVNFYLVPGLVIGSIYALGAVGITLIFAILRYAHLAHGDLATLGAFVALAAVTGFGIPPL 65 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 +PV+ +++ + + + I T++ S ++ + G Sbjct: 66 AALPVAVVVTALVAVGIDRTFYEHLRARPKIVTVMSSLGVALMIRAVVQVIWGVDTQTYV 125 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + +R Y +L M L ++ L+L R+ A R + Sbjct: 126 RGIVRPEDYFGLRLRDREI------------YTVLAMLALVGALQLFLARSKWGKAMRAM 173 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 DN + +S A AG F + + M + + + + Sbjct: 174 SDNPNLALLSGIDNRKVVTLTWLISGALCAAAGVFLGLNTEV--KSMMGWHMLLPMFAAA 231 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ILGG+ + ++ EL + + + + F L LV+L Sbjct: 232 ILGGVGRVEGAVLGGLVVGIAEELSVLVLPTEYKAAMAFS-------------ILLLVLL 278 Query: 334 MRSHSLLRLR 343 +R LLR + Sbjct: 279 VRPTGLLRGK 288 >gi|260437004|ref|ZP_05790820.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Butyrivibrio crossotus DSM 2876] gi|292810313|gb|EFF69518.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Butyrivibrio crossotus DSM 2876] Length = 294 Score = 73.4 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 94/307 (30%), Gaps = 23/307 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + +Y + A G ++V G +L+ IG Y + G +++ + Sbjct: 6 TYVFNGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGGYVLFSMIYGSGTNVFAAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V+ ++ G+++ + K + ++A LI + +L + Sbjct: 66 IVAMVVCTVLGVVIEKVAYKPLREASSLAVLITAIGVSILLQNIAQLI-----------F 114 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 R+ I+ E +++ + ++ +++R+T A + ++ Sbjct: 115 TSQPKMFRNPIKLGSVKMFGANIEGSTILMIVLGIIIVVALSIFIRKTKTGRAMLAVSED 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + FA+ SA +A + + P I + G Sbjct: 175 KDAAKLMGINVNTTITITFAIGSALAALASLLMFNAYPSLIPTS-GSMPGIKAFVAAVFG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + L + + Sbjct: 234 GIGSIPGAMVGGIVLGIIEVLSGAYIPNGTKLANAIVFVVLIVVLIF-----------KP 282 Query: 337 HSLLRLR 343 L + Sbjct: 283 TGLFGKK 289 >gi|328479459|gb|EGF48734.1| branched-chain amino acid ABC transporter permease [Lactobacillus rhamnosus MTCC 5462] Length = 157 Score = 73.4 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 15/163 (9%) Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + ++ +I+ + A IRD+ A S+ KL+AF + +A + G+ Sbjct: 2 VLMCVTTVVIVNFVHSRSGRAIMAIRDDDIAAESIGINPTKWKLAAFVLGAATAAIGGSL 61 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 A+ I+P F +I ++ IV+LGG+ S++ A +L + + Sbjct: 62 HASYLQTIAPGDFGIMNSISLLIIVVLGGVGSMTGTFVAAIVLGVIDTVLQNF------- 114 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + +AL L+++ + LL S +R Sbjct: 115 --------GTLRMVIYALALILLMVFKPSGLLGHYELSFSRKR 149 >gi|220909612|ref|YP_002484923.1| inner-membrane translocator [Cyanothece sp. PCC 7425] gi|219866223|gb|ACL46562.1| inner-membrane translocator [Cyanothece sp. PCC 7425] Length = 287 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 89/303 (29%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I + A GL++ G L L + GAY ++ + ++ Sbjct: 8 LVNGVAVGSIIALAAVGLTLTFGILRLPNFAHGDLMTTGAYLTLLANTTGINIWLSILLG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + L R + TLI+ I + ++ I Sbjct: 68 AGGTAILTLIGEKLIWSTMRERRVTSTTLIIISIGLALFLRNGIIFIWGGENQRYHLPVA 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + V+ A + L+ T + R + D+ Sbjct: 128 SAVNLLG-----------LKIVYYDLVVVGLTVLALAGLHTLLQNTKVGKGMRAVADDLD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + L + ++ + ++G + + + + + VILGG+ Sbjct: 177 LARVSGIDVDRIVLYTWLLAGSLTALSGGMYG--LITAVRPNMGWFLILPLFAAVILGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + I+ E+ + + +I + +V+L+R Sbjct: 235 GNPYGAIAGAFIIGITQEVSTYWIP-------------SEYKLAVALILMVVVLLIRPQG 281 Query: 339 LLR 341 L R Sbjct: 282 LFR 284 >gi|148557921|ref|YP_001257108.1| branched-chain amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|148369206|gb|ABQ62078.1| branched-chain amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 406 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 106/311 (34%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +YY+ L S ++ L T Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|213028256|ref|ZP_03342703.1| leucine/isoleucine/valine transporter permease subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 132 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 15/138 (10%) Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 +R+++ A SL + KL+AF +S+AF G AG FAA + +SP+ F F+E+ V++I Sbjct: 1 MREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAI 60 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V+LGGM S + A +L+ EL N Y ++ + L++ Sbjct: 61 VVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SMLMLGGLMVLMM 105 Query: 333 LMRSHSLLRLRTPSNFLE 350 + R LL + P L+ Sbjct: 106 IWRPQGLLPMTRPQLKLK 123 >gi|319780033|ref|YP_004139509.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165921|gb|ADV09459.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 346 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 68/331 (20%), Positives = 133/331 (40%), Gaps = 16/331 (4%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ V+ + + S +++ + L + GL+I+ G G +SL A Sbjct: 18 VVPVLLLAFAYGVVPLIGSSYVFEAILLPFLALSLAGVGLNILTGYAGQVSLGSAAFMAA 77 Query: 77 GAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 GA++ R + I ++ +++ A G++ GLPSL+ +G YLA++TL Q Sbjct: 78 GAFAAYNFNLRVEGLPLIGSIFLAGIVAAAIGIVFGLPSLRLKGFYLAVSTLAAQFFVQW 137 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L K+ +N A + + + Y L + + Sbjct: 138 ALTKFSWFSNNSASGVIDAPRL-------------SISGLALDGAVGRYLFALTIVTVLT 184 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254 + L + + IRDN+ A + ++ KL AFA+SS IG+AG +A A Sbjct: 185 FLAYRLVSSQTGRNFIAIRDNETAARIIGIPVLRTKLLAFAISSFIIGVAGVIWAFAYLR 244 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + PD F + ++ I+I+GG+ S+ A+++ + + L Sbjct: 245 TVEPDGFDLDRSFQILFIIIIGGLASIRGAFFGAALILVFPLALSRLGGFLLGDLFDSGV 304 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +M ++ + L +++ L+ L Sbjct: 305 -LDMSQRIVLGALIILFLILEPDGLVALWDR 334 >gi|118431912|ref|NP_148668.2| branched-chain amino acid ABC transporter, permease protein [Aeropyrum pernix K1] gi|116063235|dbj|BAA81539.2| branched-chain amino acid ABC transporter, permease protein [Aeropyrum pernix K1] Length = 309 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 116/322 (36%), Gaps = 23/322 (7%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L + L + + +M L+Y + A ++++G GL SL + + +G Y+ Sbjct: 1 MILAVAPVLLDLAGKPFYVNMIFLSLMYGISAMAWNLLMGYTGLFSLGHAVFFGVGGYTV 60 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 ++L RY ++ W+ +PV+ + + + P L+ R + +AT+ + EIF+ W Sbjct: 61 IVLALRYNVTPWIGLPVAGLTAAMLAAALSPPLLRLRSHWFTLATIALGEIFRLSFAHWD 120 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 + Y+ + + + + + Sbjct: 121 YVGASAGLQMPISERSIYYVQFAGAT--------------VYSYIAMAILAVELLFLWKI 166 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + +TIR+++ +L K + +S+ F G+AG +A + P Sbjct: 167 INSKTGFYMQTIREDELVAQTLGINTFNYKALSLVISAFFTGLAGGLYAMRFRYVDPFAV 226 Query: 262 K--FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + + I+GG+ + + I + + E F + Sbjct: 227 FDLITISTYIAIAGIIGGIYTFLGPQVGSFIFVPISEYVRANIVQAFPRVYG-------L 279 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 H ++ + L L+ L +L Sbjct: 280 HVAVLGVILLLISLFAPEGVLG 301 >gi|332160314|ref|YP_004296891.1| Inner-membrane translocator [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664544|gb|ADZ41188.1| Inner-membrane translocator [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 348 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 93/309 (30%), Gaps = 17/309 (5%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + L++ A GL+ + G G+LS + + Y+Y ++ +G + Sbjct: 38 DSAMIGDFSYFLLWTFCAIGLAAMWGHGGILSFGQTAFFGLAGYTYGVMTLNFGDGVLST 97 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 M + + + + + ++++ + Sbjct: 98 WSGLIMALLVAAAVAAALGYLMFYGGVTGIFIGIVTLSFTLVLETFMSQTAGPQWAIGSA 157 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 + + + + YY+++ + + L + + Sbjct: 158 RLNGFNGMSGMPPLSLPWFGGELLTLEGNSFYYLIILLLAGVYWAVRRLLHSNFGLTLAS 217 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR+N + L I +L F + G++GA + I+P + + + Sbjct: 218 IRENPRRAEMLGIDIRRYQLLVFVLGGVLSGLSGALYTLWGSYITPSSMGLTAAAMPVIW 277 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V G ++ TA+L+ + + + L+ L V+ Sbjct: 278 VATAGRKNIFGTVVITALLVWLSQWLAIYG--------------SEYAMILLGAILLFVV 323 Query: 333 LMRSHSLLR 341 L + LL Sbjct: 324 LAAPNGLLP 332 >gi|17988685|ref|NP_541318.1| high-affinity branched-chain amino acid transport system permease protein LIVM [Brucella melitensis bv. 1 str. 16M] gi|17984493|gb|AAL53582.1| high-affinity branched-chain amino acid transport system permease protein livm [Brucella melitensis bv. 1 str. 16M] Length = 331 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + L+ + + +++L + +FA ++++G G+LS + Sbjct: 25 LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 AY +G+S L + + + + A G+++G +++ +G Y + TL ++++F Sbjct: 81 GAAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ ++ + R F F + + MYY +L + L Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I + + +++R+N+ SL ++ KL+AF +S+ G+AG A Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + + + VI + +LGG+ +L A ++ + +F Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALKNWLATSDFPV--------- 297 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + +L+ ++ S ++ Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328 >gi|83311971|ref|YP_422235.1| ABC-type branched-chain amino acid transport system [Magnetospirillum magneticum AMB-1] gi|82946812|dbj|BAE51676.1| ABC-type branched-chain amino acid transport system [Magnetospirillum magneticum AMB-1] Length = 329 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 107/319 (33%), Gaps = 24/319 (7%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 + L + ++ I+I + A L ++VG GL+SL + +G Y + Sbjct: 22 FPAWGPLAFSAKYAFLLQKLTGIMILAILAMSLDLLVGVAGLVSLGHAAFFGLGGYMLAL 81 Query: 84 LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 L +Y + ++ +AM + A + I + + Sbjct: 82 LSPQYEAANAWVVLPAAMGAVAAVSAVVGFLAIRTAGIYFIMVTLAFGQMGYYFFNDSKL 141 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 G G Y+ + + F + + ++V+LG + + Sbjct: 142 AGGSDGAYIYVKP---------NVEAFGITLVNLESKQAFFFVVLGCLVAVYLWLRVVLA 192 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 + I N+ L + KL AFA++ A G+AG A +SP M + Sbjct: 193 SPFGRVLAAIGVNEGRVRGLGFNPMVYKLVAFALAGALAGLAGFLAATQYGFVSPAMLGW 252 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 ++ V+ +VILGGM +L IL + ++ Sbjct: 253 HQSGHVLVMVILGGMGTLFGPVLGAFILELAHFGLEAVTEHW---------------LLP 297 Query: 324 MVIALFLVILMRSHSLLRL 342 M + + ++L + L Sbjct: 298 MGVLVITIVLALPKGVAGL 316 >gi|312199577|ref|YP_004019638.1| ABC transporter [Frankia sp. EuI1c] gi|311230913|gb|ADP83768.1| ABC transporter related protein [Frankia sp. EuI1c] Length = 1092 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 118/319 (36%), Gaps = 9/319 (2%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ + + + L + + M + ++VG G LSL + + A Sbjct: 311 ALIVAMTVAICLIWYALPVDWVNALDVNAQWAMLILSVVVLVGLTGQLSLAQLAFSGVAA 370 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 L + G + + + + + A G++ LP+L+ RG LA+ TL + +IL Sbjct: 371 LIAGRLVAVRGWPLEAALALGVLGTAALGVLFALPALRTRGLQLAVVTLGLGAAADSILF 430 Query: 139 KWKPITNGKAGIYVADR--LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + T G A L T+ F V + L + A Sbjct: 431 QRGYHTPPPPGSAAAAFGVLGDPEGTIVGHQTLFGVRLDTVEAPRAFATLSLLSFGVLAV 490 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + LRR + +R N++A +L +++ AKL AFA+S+A G G FA Sbjct: 491 AVANLRRGRVGRRLIAVRTNERAAAALGISVVGAKLYAFALSAAIAGYGGVLFAFYTYGA 550 Query: 257 SPDMFK------FSENIIVISIVILGGMTSLSKIAKATAILIG-VVELCCGMNFYYFNSL 309 ++ +I++I+ +LGG+ +S G + + Sbjct: 551 RGNIDYGGGLFSPFTSILLIAFAVLGGVGWVSGAFAGATWATGALGTRLGAWIGDLLTGV 610 Query: 310 LKFDCSFNMRHTTLMVIAL 328 F + T++ +L Sbjct: 611 AAFARTVIALLGTVVGFSL 629 Score = 54.1 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 92/290 (31%), Gaps = 12/290 (4%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y +Y + + G+ IV G+L+L A AYS+ + L W Sbjct: 7 YALLGLGTAGLYALMSAGIVIVQRGSGVLNLAHGALLAWAAYSFHGAAVVWSLPTWFAAV 66 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ + G++ L ++ D A+ ++ + IL + A L Sbjct: 67 LAVGSTALIGLLFHLLVMRPMRDGSALTRVMATLGLLIILQAMLTLIYSTAVRSSPTVLP 126 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 T+ + + + + A + R T I A + +N Sbjct: 127 TGNVTLFGMPVDWGVFVRLGVVGAVL-----------AGLWALFRHTTIGLAATAVTENP 175 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +A + + A+ + +A G+AG A + + + ++I ++ G Sbjct: 176 RAAATFGWSPDLVAAGAWTLGAALAGLAGVLLAPLQQPLGAPNL-MLLIVPALAIGLVAG 234 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S + A+ +L V + D + + + Sbjct: 235 FRSFPAVFVASVVLAIVEVETQVQLVSKHPAWRGVDRAIPLLVIVFYLAI 284 >gi|163740305|ref|ZP_02147699.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161386163|gb|EDQ10538.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] Length = 297 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 91/302 (30%), Gaps = 22/302 (7%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + Y + A GL++V +GL++ I Y+ + G +S L +P++ Sbjct: 9 VNAFALGGTYALLALGLAVVFSIMGLINFAHGELMTISGYTLMYCGIAG-VSFVLAVPLA 67 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ ++M + + + L+ S IL Sbjct: 68 IAVAMIAAILMERIAFRPVRNSSGATMLVTSFAVSMILQVLFQNFIST----------RS 117 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + I + ++ + + + + ++++R A R ++ Sbjct: 118 QPVLLPQILSDSVNAFGLVIGVNKIAAIATTIVMLVFLDIFMKRQKTGIAMRAAAEDFNV 177 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + AFA+S G+A + + R + P M F + ILGG+ Sbjct: 178 ARLMGIRANTVIAGAFALSGMLAGVAAVLWVSQRSSVDPHM-GFLPVVKAFIAAILGGLG 236 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 SL +L + + + L R + L Sbjct: 237 SLRGAVAGGFLLGFIEIYLAAFLPPELQEFREPIGLSLVVVVLL----------FRPNGL 286 Query: 340 LR 341 + Sbjct: 287 IP 288 >gi|149378161|ref|ZP_01895879.1| inner-membrane translocator [Marinobacter algicola DG893] gi|149357565|gb|EDM46069.1| inner-membrane translocator [Marinobacter algicola DG893] Length = 287 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 91/302 (30%), Gaps = 27/302 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A GL++V G L + + Y +GA+ G W+ + Sbjct: 8 IINGLTLGSIYGLVALGLTLVYGILHIPNFAHGALYMVGAFMSYFFMVDLGAHYWIAMAG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 SA + ++ I I + L + G ++ Sbjct: 68 SAAVVAVLAILCERLVFHPLRHSPPIHDKIAAIGILLFLEAVVQMFWGSDFRRMSSPFTG 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +I ++ G L ++ L+LR+T + +++ Sbjct: 128 IM------------NFDGLIIPEQRLLIIAGAFVLVVALQLFLRKTMTGATIIAMAQSRE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 F + + FA+S A +A + + I+ILGGM Sbjct: 176 GAFLVGIDANRVAMMTFAISGMLAAFAATLYAP--INLVYPAMGHLVIMKAFVIIILGGM 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ L + ++ F L L++ +R Sbjct: 234 GSVPGAIAGGMIIGFAEALGGFYISTSYKDIIAFG-------------LLVLILSVRPQG 280 Query: 339 LL 340 L Sbjct: 281 LF 282 >gi|19552158|ref|NP_600160.1| ABC-type transporter, permease component [Corynebacterium glutamicum ATCC 13032] gi|62389822|ref|YP_225224.1| branched chain amino acid ABC transporter permease [Corynebacterium glutamicum ATCC 13032] gi|21323698|dbj|BAB98325.1| ABC-type transporter, permease components [Corynebacterium glutamicum ATCC 13032] gi|41325157|emb|CAF19638.1| Branched-chain amino acid ABC-type transport system, permease component [Corynebacterium glutamicum ATCC 13032] Length = 359 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 99/314 (31%), Gaps = 18/314 (5%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + ++ +++ Y + A G+ + G G+L+L + + IGAY + I+ Sbjct: 47 FLSTFQLTLMSRLVCYAIVAVGIGLAWGRGGMLTLGQGVFFGIGAYIMAMHMLYSDSQIF 106 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI----FQNILIKWKPITNGKAG 149 A + + + G + + + ++ Sbjct: 107 GTTVPQWWSIFANPAVALIAVVALPGIVAFVLGFSIFKRRIKGAYFAIVNQALAAAVVVL 166 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + F F I I Y+ +G+ +I WL R+ Sbjct: 167 LVGQQDSLGGSNGLSGFRSFMGFAVYDPINRIMFYFTAVGVLLALVAISYWLMRSRYGEL 226 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 RD ++ L K +A+ +++ G+AGA F ISP +I+ Sbjct: 227 LVATRDAEERVRFLGYDPALIKTAAYVIAAMIAGIAGALFVPIVGIISPAEIGVVPSIVF 286 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + V GG SL +L V +F + L Sbjct: 287 VIAVAAGGRASLFGPVVGALVLGWVESTL--------------AQTFPSMWSYFQGAILV 332 Query: 330 LVILMRSHSLLRLR 343 LVI++ + ++ Sbjct: 333 LVIVLLPGGIASIK 346 >gi|242277714|ref|YP_002989843.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638] gi|242120608|gb|ACS78304.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638] Length = 300 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 82/304 (26%), Gaps = 18/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ +A G Y VI S Sbjct: 8 LINGITLGSVYALIALGYTMVYGIIQLINFAHGEFFAAGGYVGVIFMSYLLAQGAPAWVC 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + ++ + + Sbjct: 68 LSGSLILAMAYCAMLAMAVEKVAYKPLRSSSRLSVLLSALGMSIF----LQNGLMLTQGV 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + F V+ +++ FL ++ + +T I A R+ ++ Sbjct: 124 YDRPYPTELTQGGFEFGTVMLSYMQLFIVSLTAFLLVALNFLVFKTRIGKAMRSTAQDKI 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ + AG + F I + +LGG+ Sbjct: 184 MSALVGINSNRIISLTFAIGAGLAAAAGIMVGLYYGSV-RYDMGFVPGIKAFAAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ I+ V G + + F + L V+ R Sbjct: 243 GNITGAMIGGFIIGMVEIFAAGYISGEYKDVFAF-------------LILIGVLYFRPSG 289 Query: 339 LLRL 342 ++ Sbjct: 290 IMGE 293 >gi|168334626|ref|ZP_02692775.1| inner-membrane translocator [Epulopiscium sp. 'N.t. morphotype B'] Length = 367 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 97/348 (27%), Gaps = 28/348 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 ++ ++ ++ L + + Y + A G+ ++ G G+LSL + + Sbjct: 10 FAVIVIILAMVPVLLQLNLIGGSSTVIFIGKCMAYAIVAIGIDLIWGYTGILSLGHGLYF 69 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+G Y + + + +I + + IA Sbjct: 70 ALGGYGMAMYLKLVSTGGEITDFMRVGGIEELPLIWKIFEYLPNAMFFMIAIPAAVSFLV 129 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE-------------- 180 ++ + I + + + SL + + Sbjct: 130 GYMMFKNRVKGVYFSIISQALTWAMYSIFISLSPYTNGNVGITEIKSLFGSVKGDANRGN 189 Query: 181 -IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 ++Y L + L +L IRD + + ++ K + S+ Sbjct: 190 MFLLFYATLAVLILVYVFAKFLVGRKFGRVLVAIRDGENRTYFSGYSVSLFKTFVYVXSA 249 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +AGA F I+P +I+++ V +GG ++ ++ Sbjct: 250 VIAAVAGAIFVNFNGSITPSEMTIEFSIMMVIWVAVGGRGTIIGAVIGAFLINIGQYNLS 309 Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 F ++ L IL L+ L Sbjct: 310 S-------------GIFVEAWQYIIGAVFCLTILFFKGGLVGLAKEQI 344 >gi|186685164|ref|YP_001868360.1| inner-membrane translocator [Nostoc punctiforme PCC 73102] gi|186467616|gb|ACC83417.1| inner-membrane translocator [Nostoc punctiforme PCC 73102] Length = 317 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 107/288 (37%), Gaps = 30/288 (10%) Query: 62 SLGLLSLNCVIAYAIGAYSYVILGS---------RYGLSIWLLIPVSAMISGACGMIMGL 112 G LSL YA+G Y IL + + L + ++ +ISG +I+G+ Sbjct: 30 MAGQLSLASPGFYALGGYIAAILSTKLFPSSNNLFPIPLLLLEMLIAGLISGILAVIVGI 89 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 P+L+ RG YLAIAT+ E+ + + + IT G GI+ + + Sbjct: 90 PALRLRGIYLAIATIAFVEVLRVVSLNL-DITGGAVGIFGIPQPFQSQ------------ 136 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 I ++ + + +S + L R A+ IR+++ A ++ + K+ Sbjct: 137 --------IEYLWIAVPLLLVSMVLFYRLERIRTGRAFIAIREDELAASAMGINPTYYKV 188 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 AF + + + G A + + F I ++IV++GG + +L Sbjct: 189 LAFTLGAVLAAIVGVISAHFLNTWNARQGTFDAGITYLTIVLIGGSRTFLGSVVGAIVLK 248 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 ++E+ + I + L + + Sbjct: 249 VLLEIILRRIADIAGLPNWLAQFLRDGRLIIYGILIVLGTIFFPQGFV 296 >gi|320011375|gb|ADW06225.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331] Length = 310 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 102/311 (32%), Gaps = 19/311 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA------YSYVILGSRYGLSI 92 + + +Y + A G ++V G + L++ + IG Y + G+ + I Sbjct: 8 LANGLALGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTTYLALPSGTSLMVVI 67 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 L+I A+ S A + + +A LI + +L + Sbjct: 68 PLMIIGGAIASVAVATAAERFAYRPLRGAPRLAPLITAIGLSIVLQQLVWGF-------- 119 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 + + + ++L+ ++ +++ ++ A + Sbjct: 120 -YPDAKKPRSFPEFKGESFKIFDNLYLQRADAFILVLAPLCMLALGMFVAKSRSGRAMQA 178 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 + + + AFA+ +AF +A + + +I+ +M F + + Sbjct: 179 TAQDPDTAKLMGINTDRIIVMAFAIGAAFAAIAAVAYGLDKGQINFEM-GFLLGLKAFTA 237 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 +LGG+ ++ +L L ++ +++I + LV Sbjct: 238 AVLGGIGNIYGAMVGGVVLGLAEALSIAYIEEIPGMQQLGGGAWANVWAFVLLIVVLLV- 296 Query: 333 LMRSHSLLRLR 343 R LL R Sbjct: 297 --RPQGLLGER 305 >gi|227811755|ref|YP_002811765.1| ribose ABC transporter, permease protein [Vibrio cholerae M66-2] gi|229506704|ref|ZP_04396213.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae BX 330286] gi|229510502|ref|ZP_04399982.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae B33] gi|229517367|ref|ZP_04406812.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae RC9] gi|229605177|ref|YP_002875881.1| ribose ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254850397|ref|ZP_05239747.1| ribose ABC transporter permease protein [Vibrio cholerae MO10] gi|298499990|ref|ZP_07009796.1| ribose ABC transporter permease [Vibrio cholerae MAK 757] gi|227010897|gb|ACP07108.1| ribose ABC transporter, permease protein [Vibrio cholerae M66-2] gi|227014757|gb|ACP10966.1| ribose ABC transporter, permease protein [Vibrio cholerae O395] gi|229345403|gb|EEO10376.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae RC9] gi|229352947|gb|EEO17887.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae B33] gi|229357055|gb|EEO21973.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae BX 330286] gi|229371663|gb|ACQ62085.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae MJ-1236] gi|254846102|gb|EET24516.1| ribose ABC transporter permease protein [Vibrio cholerae MO10] gi|297541971|gb|EFH78022.1| ribose ABC transporter permease [Vibrio cholerae MAK 757] Length = 333 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 32/312 (10%), Positives = 97/312 (31%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 35 LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + ++ + + + +P + + A G I G+ K + + M+ Sbjct: 94 LCG-AFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMT----- 147 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G +Y R G T + + + + ++ +++ Sbjct: 148 -------LLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWY 200 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + T + N+ A + K+ +A+ +AG + Sbjct: 201 LL----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 317 AKAVVILLAVLV 328 >gi|295680864|ref|YP_003609438.1| inner-membrane translocator [Burkholderia sp. CCGE1002] gi|295440759|gb|ADG19927.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 308 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 21/272 (7%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 YI + + +FA ++ G G ++ +GAYS IL +R+GL Sbjct: 24 PWWLSGYILGVLTVAFYFGVFAMSWDLLFGFAGEVNFGPTFLIGLGAYSAAILNARWGLP 83 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 I + + + G+++ +P+L+ RG Y + TL+ + QN ++ + IT G+ G+ Sbjct: 84 IPVCVLAGGGFALVGGLLLAVPALRLRGPYFGLVTLVAVLLLQNAIVIFAGITGGEIGMT 143 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 V D + Y++ L + A ++ L R+A+ + Sbjct: 144 VPDVMSVDANH--------------------NYWIALAFLIICAILLFGLSRSAVGLILQ 183 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS-PDMFKFSENIIVI 270 + +L + KL AF +S+ F G+AGA + S + S + +I Sbjct: 184 ASGQDATGAQALGFNVTRHKLVAFCISAVFSGVAGAMLVFYQGTASVSTVVDLSVGVQII 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 +LGG ++ + LI E + Sbjct: 244 IAAVLGGRRTILGAVLGSIFLIVAGEFLRPLG 275 >gi|224418042|ref|ZP_03656048.1| ABC transporter permease [Helicobacter canadensis MIT 98-5491] gi|313141580|ref|ZP_07803773.1| abc transport system permease protein [Helicobacter canadensis MIT 98-5491] gi|313130611|gb|EFR48228.1| abc transport system permease protein [Helicobacter canadensis MIT 98-5491] Length = 299 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 93/290 (32%), Gaps = 11/290 (3%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + +Y + A G ++V G L L++ +GA+ S GL + + + Sbjct: 11 INGLSLGSMYALIAIGYTMVYGCLRLINFAHADIIMVGAFLSFFAVSSLGLPFYASVIFA 70 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +I G+ + + I+ LI + L + G + + +F Sbjct: 71 VVICMILGVGIDRVAYLPLRSAPRISMLITAIGVSFFLENLFNVLFGSTPRFFSSPEFFA 130 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 T F S + V + L +++ +L RT A R + Sbjct: 131 KT----------FNFSNISITYITIIVPIVTLILLVALLQFLYRTKQGMAIRATAFDINT 180 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + F + SA G+ G F+A S I P M + + +LGG+ Sbjct: 181 VRLMGINVNNIIGLVFVIGSALAGIGGIFYAISYPTIDPLM-GIMIGLKAFAAAVLGGIG 239 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 S+ IL + + F F + + + Sbjct: 240 SVGGAVLGGFILGFTEVMAVAVFPELGGYKDAFAFLFLILVLLFRPVGIM 289 >gi|229059634|ref|ZP_04197012.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus AH603] gi|228719647|gb|EEL71246.1| Branched chain amino acid ABC transporter, permease [Bacillus cereus AH603] Length = 286 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 117/301 (38%), Gaps = 31/301 (10%) Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIM 110 +++G G++S + + IGAY +L R ++ ++ I + ++S I+ Sbjct: 1 MSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSIMNFFIGIAAAIIVSAIVSYII 60 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 G+ SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 GMLSLRLKSHFYAMLTLAISQLFFVLAEKWRSLTHGGDGFTFRVPDIFRDRF-------- 112 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 YY+ ++ +++I + I N++ +L ++ Sbjct: 113 -----------TFYYITFICLISIFILLRLFTKSSIGKVLKAISQNEQRVEALGYKVLHY 161 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 K+ A V+ ++G F + ++ +F + + + ++GG+ +L Sbjct: 162 KIIASVVAGGVATISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLI-------- 213 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + Y+ S L + R T ++ + +V+L+ L+ + Sbjct: 214 -GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKGLIGTVKKLKNFK 272 Query: 351 R 351 R Sbjct: 273 R 273 >gi|170740177|ref|YP_001768832.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168194451|gb|ACA16398.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 318 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 65/327 (19%), Positives = 117/327 (35%), Gaps = 29/327 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + L L + I LI + G +++ G G S + Sbjct: 6 VLPPLLALAALGALAFLGLSGSALNFLITTLIIALAGLGWNVLGGFGGQYSFGHAAFFGT 65 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134 GAY+ +L R+G + W + + A G ++G S + RG Y A+ TL +E+F+ Sbjct: 66 GAYATAVLQLRFGWNAWAGLAAGIGLGTATGFLIGTLSFRAGLRGSYFALVTLAFAEVFR 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 IL +T G AG+ + + F F ++LG + Sbjct: 126 -ILANAADLTGGAAGLLLTLQPGFGTMQFADRRLFC--------------LLVLGFVGAA 170 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 W+ R+ +R+N++A +L + KL A A+S+A AGA + Sbjct: 171 LLASRWIERSRFGAQLIAVRENEEAARALGVDALRVKLGAIALSAAITAAAGALYVQHFL 230 Query: 255 RISPDMFKFSEN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + + + + + I+GG+ + L G+ E ++ Sbjct: 231 YLDAGVAYGTWISVEALLAPIVGGIGTAFGPLVGALALQGLGEATKHLSG---------- 280 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340 + I L VI L+ Sbjct: 281 -GVPGLDLVVFGICLVAVIAFAPQGLI 306 >gi|332529305|ref|ZP_08405267.1| branched-chain amino acid transport permease [Hylemonella gracilis ATCC 19624] gi|332041222|gb|EGI77586.1| branched-chain amino acid transport permease [Hylemonella gracilis ATCC 19624] Length = 296 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 100/309 (32%), Gaps = 22/309 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I S I IY + A GL++ G + +L++ +GAY ++ +++G+S L+IPV Sbjct: 10 IVSGLITGGIYALIALGLNLQYGLMRILNIAHGEFLMVGAYLTWLVQTQFGISPLLMIPV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + A GM++ + + + + N + ++ D + Sbjct: 70 SFAVLMALGMVLHFLCFRRLTRTSPNLDVFEARSLMVAFGLMFLVQNFVSWLWGGDLRGY 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + + + + ++I+ +R+T + R + + Sbjct: 130 DYLTEP-------VKFGEMQFAANKLLIFFLALLFAGALIVLMRQTLLGKGVRALMQSPT 182 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + G+AGA + + + + ++ LGG Sbjct: 183 GAQLMGIDTQKLHPLMFGIGLGLSGVAGALLSMAYTI--TPFMGQPYTVTALIVITLGGF 240 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ L + L + L V+L+R Sbjct: 241 GSMGGALVGGLFLGVIE-------------ALGMHFTNPSLKALLSYTVFIAVLLLRPEG 287 Query: 339 LLRLRTPSN 347 L ++ Sbjct: 288 LFTRKSRKA 296 >gi|170704144|ref|ZP_02894749.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|170130946|gb|EDS99668.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] Length = 408 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 102/298 (34%), Gaps = 12/298 (4%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L V + Q V+ A ++ +G+ GLLS Sbjct: 7 AGALRWVLFAACVALPAWLWPHGAMLGYLAQTAALVVLALSYNLQLGTTGLLSFGHAAFA 66 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GA++ +R G + LL V + S G I GL + + G A+ TL ++E Sbjct: 67 GLGAFAAAHWFNRVGGPLPLLPLVGGVASAGFGFIAGLLATRRAGTVFAMITLGLAECVA 126 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 G G+ + + Y V+ C +S Sbjct: 127 AAAWSVPAWFGGLGGVPI------------DRASGTPWGGWHFGAPAQAYAVIAAWCIVS 174 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + L RT ++ +RDN +L T +L+ +S F G+AG + Sbjct: 175 ALAMRALTRTPLARLANAVRDNPARVAALGTEPRHVRLAMVTCASFFAGIAGTLTLIDVE 234 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 +PD + + V+ ++GG + A +L + + G++ + L Sbjct: 235 IATPDSLSMARSATVLIAAVIGGTGTFFGPAAGAVVLTMLSVVVAGVSRAWALYLGVL 292 >gi|33591537|ref|NP_879181.1| branched chain amino acid ABC transporter permease [Bordetella pertussis Tohama I] gi|33603394|ref|NP_890954.1| branched chain amino acid ABC transporter permease [Bordetella bronchiseptica RB50] gi|33571179|emb|CAE40681.1| probable branched-chain amino acid transport system, permease component [Bordetella pertussis Tohama I] gi|33577518|emb|CAE34783.1| probable branched-chain amino acid transport system, permease component [Bordetella bronchiseptica RB50] gi|332380876|gb|AEE65723.1| branched chain amino acid ABC transporter permease [Bordetella pertussis CS] Length = 321 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 122/279 (43%), Gaps = 15/279 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 F + + S ++LIY + A L++++G G+++L + GAY+ ILG+ Sbjct: 18 FPLVAPALGLDFYISFVRRVLIYALAATSLNLILGYGGMVALGHAAFFGAGAYAVGILGA 77 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 S L P + ++GA I G SL+ RG Y + TL +++ + I + Sbjct: 78 AGITSALLAWPAAIALAGALAWITGAISLRTRGVYFIMITLAFAQMVYYVFISLRQYGG- 136 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +L + P + ++ YY++L + + + + + Sbjct: 137 --------------EDGLNLSGYSTLPGLDLANDLTFYYLVLVLFAVLMGVFGRVVDSRF 182 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 A + IR+N+ SL + KL+AF +S A G+AGA A ISP + ++++ Sbjct: 183 GAALQGIRENESRMESLGYPVYRLKLTAFVISGAAAGLAGALLANHNLFISPSLMHWTQS 242 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 ++ +V++GG+ +++ + E+ Y+ Sbjct: 243 ANLLIMVLVGGIGLRYGGVAGAVVMLVLEEVLRQWTEYW 281 >gi|311693820|gb|ADP96693.1| branched-chain amino acid ABC transporter, permease protein [marine bacterium HP15] Length = 315 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 111/321 (34%), Gaps = 26/321 (8%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 V P+ + + + I Y + + GL+++ G L +++ Y +GA + Sbjct: 18 VSPMSMIFGVPLAVLSGQLLIGIINGAFYALLSLGLAVIFGLLKIINFAHGAMYMLGAMT 77 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 V++ G++ W+ + ++ ++ GA G+ + L+ I +L+++ I+ Sbjct: 78 TVLMFDYLGVNYWVALLLAPLLVGAFGVAIEYFLLRRIAGQDHIYSLLLTFGVALIISGV 137 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 G +G+ + F+ + +V++ + + Sbjct: 138 LVNWFGVSGLRYTMP----------DMFKGGVNLGFMFMPYYRAWVIVAALVVCFATWFV 187 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + +T + R ++ + + + A AG A + Sbjct: 188 IEKTKLGAYLRAGTEDSQLMQGFGINVPLLISLTYGFGVALAAFAGVLAAPIYSV--TPV 245 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + I V ++V++GGM S+ ++ + L + Sbjct: 246 MGSATLITVFAVVVIGGMGSIGGAIITGILMGVIEGLTKTF--------------YPPAS 291 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + ++ + + LV++ R L Sbjct: 292 SAIIFLVMVLVLMFRPSGLFG 312 >gi|221640787|ref|YP_002527049.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131] gi|221161568|gb|ACM02548.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131] Length = 308 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 65/320 (20%), Positives = 113/320 (35%), Gaps = 28/320 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +LA+ +L + Y + +IL+ +A G +I G GLLSL + +A Sbjct: 1 MLALHLAVLAGVAALQFVLPAYHHTNAARILVLATYAIGFNIAFGYTGLLSLGHALFFAG 60 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y+ +L + G W + + G +GL +L+ G I TL+ ++ F Sbjct: 61 GMYATGLLVGQGGWQPWAALLAGPVAGGVLAAGVGLLALRTAGPAFMIVTLMFAQAFHLA 120 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 ++ W T G G R + Y + + Sbjct: 121 ILYWGRFTGGDEG-------------FTLSGAARRIGPFDLADPATRYGAAFLLFAAAML 167 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 L L R+ +R+N++ L AKL A A+S G AGA + + Sbjct: 168 GCLALVRSRTGRVLIAVRENEERTRMLGYDTFRAKLLALALSGLLSGAAGATYGLMFGYV 227 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +I+ + V+LGG ++ TA+L + + + S Sbjct: 228 GGSFTAIQYSILPLIWVLLGGAGTVLGPLLGTALLFYL---------------IDWSSSV 272 Query: 317 NMRHTTLMVIALFLVILMRS 336 ++ L L+IL Sbjct: 273 TTASQFVVGAVLILLILFAP 292 >gi|114764371|ref|ZP_01443597.1| ABC transporter related protein [Pelagibaca bermudensis HTCC2601] gi|114543125|gb|EAU46143.1| ABC transporter related protein [Roseovarius sp. HTCC2601] Length = 816 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 91/317 (28%), Gaps = 29/317 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ + + ++ S + + M + A+G ++ G + L+ Sbjct: 512 MVAAAILFLGAVAGMWNPFYLSPRSLTGMMTFAATLALVAYGQQFLMMVSG-IDLSVGPT 570 Query: 74 YAIGAYS--YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + +L S + +++ A G++ + R + +ATL Sbjct: 571 MGLCQVVGSFFLLQELGPGSHVAGWVLLLLVAMAVGVVNWILVEGLRM-HPMVATLATFM 629 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 Q I + +P+ G + + ++ F+ VLL + Sbjct: 630 AVQAISLILRPVPGG---------------MIDGDVMMALSMKVGIVPVTFIAAVLLAL- 673 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + WL R + + R + Q+A + A+ A+ S G+A A Sbjct: 674 ----VLEFWLYRREMGVSMRGLGSRQEAARTAGIRPKLARFVAYVGCSFLAGLAAITMIA 729 Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 P + ++VI GG S + V + + Sbjct: 730 QVGIGDPRAGLTYTLGSIAAVVIGGASLFGGRGSFVGALLGAIFITQVNSVTVFLRLSQE 789 Query: 307 NSLLKFDCSFNMRHTTL 323 Sbjct: 790 WQQYLLGFLILASVALY 806 >gi|228985061|ref|ZP_04145229.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774749|gb|EEM23147.1| Branched chain amino acid ABC transporter, permease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 286 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 115/292 (39%), Gaps = 31/292 (10%) Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIM 110 +++G G++S + + IGAY +L R + + + + +IS I+ Sbjct: 1 MSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGLVAAIIISAIVSYII 60 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 GLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPDVFRDRF-------- 112 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 YYV L + ++ +++I + I N++ +L ++ Sbjct: 113 -----------TFYYVTLICLLIIFVLLRLFTKSSIGKVLKAISQNEQRVEALGYKVLHY 161 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 K+ A V+ ++G F + ++ +F + + + ++GG+ +L Sbjct: 162 KIIASIVAGVVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLI-------- 213 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + Y+ S L + R T ++ + +V+L+ L+ Sbjct: 214 -GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKGLVGT 264 >gi|17942385|gb|AAL50009.1| putative channel-forming polypeptide [Burkholderia cepacia] Length = 314 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 113/286 (39%), Gaps = 14/286 (4%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L ++ L + ++++++ + + G+ +++G G+++L Y IG Sbjct: 8 LILIGLFTLAWLVLPMQAERHLVDGLNFAALLAIGGLGVGMLLGQCGIVNLGQAAFYGIG 67 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ + G + + +SG ++GLP L+ G +LA+ATL + I + Sbjct: 68 AYATGYGTTVLGWHWLPSMLMGMALSGGVAALIGLPILRLSGFFLALATLAVGSIAGVLF 127 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 +W +T G G+ +L +G + RF Y + + L + Sbjct: 128 FEWDWLTGGTLGVGGIPKLGLMGFELSDPTRFH--------------YFIWPLVALLLWL 173 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 L + A R +RD A L+ + K F + + +AG+ FA +S Sbjct: 174 ASNLVNSRQGLAMRAMRDAAPAAEVLSVDMHRIKTVMFVLCAMLGALAGSLFAHYVSFVS 233 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 F +I+ + + ++ G S+ I + + E + Sbjct: 234 VQSFTVERSILFLLVPVVAGARSVLGIVIGALFVALMPEALSTLGD 279 >gi|311103795|ref|YP_003976648.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310758484|gb|ADP13933.1| inner-membrane translocator 10 [Achromobacter xylosoxidans A8] Length = 306 Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 96/308 (31%), Gaps = 15/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL++V G + +++L Y GAY R G ++ Sbjct: 10 LLNGLQFGLMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRTGSFTAAVLVA 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ + L + + +L + I + + Sbjct: 70 AVATGIVGVVLELTLIRR----------LALRDHLAQVLGTYAVILIANDLVKMIWGPAP 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + ++Y + +++ +A + ++ RT R N++ Sbjct: 120 VMLNMPAALSGPVRLLPDLLYPAYRLMIIVFGVAAAAGLYWFVTRTRAGVLVRAGASNRQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + L F + + +AGA I+V+ +++GG+ Sbjct: 180 MATLMGVRVPLLFLGVFVLGAMLAAVAGALLGPITSV--QVGMGEEILILVLVCIVIGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335 S+ ++ V + + + + + V++ R Sbjct: 238 GSIRGAFVGALLVGMVDTAGRAFLPMLLRQVFSPAVASSVGPTLAAIAIYVLMAAVLVFR 297 Query: 336 SHSLLRLR 343 L R Sbjct: 298 PSGLFPAR 305 >gi|262373785|ref|ZP_06067063.1| urea ABC transporter, permease UrtC [Acinetobacter junii SH205] gi|262311538|gb|EEY92624.1| urea ABC transporter, permease UrtC [Acinetobacter junii SH205] Length = 356 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 100/345 (28%), Gaps = 27/345 (7%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 +L + L L A Y ++ +I+ + A L +V G G+LSL Sbjct: 17 IAIFFAVLLSLPWLHLLSPDSAFYLSAYWITLIGKIMCLALVALALDLVWGYAGILSLGH 76 Query: 71 VIAYAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 + +A+G Y++ + W +P + + M L Sbjct: 77 GLYFALGGYAFGMYLMRESAGDGLPDFMRFLSWTELPWYWVGTEHFAWAMILVLFVPALV 136 Query: 121 YLAIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + +I + + + F + Sbjct: 137 AFIFGFFAFRSKIKGVYFSIITQAMTFAAALLFFRNETGFGGNNGFTGFKTLLGFDITSA 196 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + +V + L + L IRD++ L ++ KLSA+ + Sbjct: 197 PMRASLCFVTALVLMLCFIGLRQLMNRPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVL 256 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S+ G+AGA + I+P +I + V GG +L ++ V Sbjct: 257 SAVIAGIAGALYVPQVGIINPSEMNPVNSIEMAVWVAAGGRGTLIGPILGAGLINAVKTY 316 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F + ++ +V + ++ L Sbjct: 317 --------------FTVAAPEAWLLILGALFIVVTIFLPKGVIGL 347 >gi|221633385|ref|YP_002522610.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM 5159] gi|221157057|gb|ACM06184.1| ABC transporter, ATP-binding protein [Thermomicrobium roseum DSM 5159] Length = 590 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 117/309 (37%), Gaps = 39/309 (12%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + ++GI IL+Y A + G + L + +GAY+ + + + Sbjct: 25 GNDFHIALGISILMYATLAIAWGLFAGPTKYIGLATAAFFGVGAYTVGL--LYEKVPMLA 82 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 L P++A+I+ +I+GL +L+ +G Y I T ++E+ + ++ ++ G G+Y+ Sbjct: 83 LYPLAAVIAALLALIVGLTTLRIQGMYFTIFTFGLAELIRQLMTWYQRNVTGSVGLYIIT 142 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + +Y+ L + L+ L R+ A I Sbjct: 143 DITARQ----------------------IYWALTVLLGLTLLAGWLLARSRYGLALLMIG 180 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIV 273 +++ A K+ A +SA + + GA A + P+ F + + + I Sbjct: 181 EDEVAARHSGVRTTAVKVLTLAGTSAIMAVTGAIVAPRWTYLDPNIAFNPTLSFMPAVIA 240 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGGM L+ + + + F +T ++ + ++ Sbjct: 241 LLGGMQRFWGPLAGAIPLVILFDQL--------------NARFPTAYTLILGLLFMAIVF 286 Query: 334 MRSHSLLRL 342 + + +L L Sbjct: 287 VIPNGILGL 295 >gi|187479304|ref|YP_787329.1| ABC transporter permease [Bordetella avium 197N] gi|115423891|emb|CAJ50443.1| ABC transporter, permease protein [Bordetella avium 197N] Length = 293 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 112/305 (36%), Gaps = 26/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y +FA G ++V G LG+++L + +GAY+ + + + L +W + Sbjct: 6 FVNALSLGSVYALFALGFTLVFGVLGVINLAHGAVFMVGAYAALTVVEQLSLPLWAALIA 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++G GM++ + + + +I + IL G + + Sbjct: 66 AFLVAGLTGMLIDYLVLKPLRKRNAPHLIPMIATIGVGIILNNAAQGIFGASNLRFPH-- 123 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + + ++ L A ++ +RRT A R I ++ Sbjct: 124 --------GTVPEEVIEIAGLHLTVIELGIIFLSFALMAVLMFVMRRTQFGRALRAIAES 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 KA + L + ++ ++A G+AG + + P M + + + +++ILG Sbjct: 176 PKAAWLLGINVERLFITTSFAAAALGGIAGVLIGLYSNALFPLMGQPMLHKGI-AVIILG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM + L L + F LFL++L+R Sbjct: 235 GMGDIRGAMLGGLFLGFAEVLSVAYVGSTMRDAVAFG-------------LLFLILLVRP 281 Query: 337 HSLLR 341 L Sbjct: 282 QGLFG 286 >gi|33599746|ref|NP_887306.1| branched-chain amino acid ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|33567343|emb|CAE31256.1| branched-chain amino acid ABC transporter, permease protein [Bordetella bronchiseptica RB50] Length = 333 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 113/326 (34%), Gaps = 26/326 (7%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + +++ I S + I I + ++GL +VV LG +SL + +A Sbjct: 9 AALLPLAVIVLYLPAWLGGSPAIYSAAVLIAILAVMSYGLDVVVSDLGEVSLGHTVFFAT 68 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY +L +R G W + + + + ++GL +L+ R ++ T ++ + + Sbjct: 69 GAYVTALLSTRTGAGAWTTLAATIVAALGVSAVVGLVTLRLREFVFSLVTYAVAVVAVTV 128 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 W + + +L S + ++ G+ + Sbjct: 129 AANWAFLGG-----------SDGLRGLPTLDLSVAGLSLTAGNDEELWPYAFGLLVVVIY 177 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 +I R + + A + N + +L F S+ AG +A R + Sbjct: 178 LIDRFRHSRLGTAAIMVHQNPRLATMSGIDPARVRLQVFLFSAPISAAAGWLYAYQRAYV 237 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 S D+ + I++++ V+L G L ATA L+ + E Y +L Sbjct: 238 SADILETYFLILMLTAVVLVGRRQLLGPLLATA-LVLIQEKFFSFGGYVDKIVLGSLLVL 296 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 + L+ L Sbjct: 297 VLA--------------FFPQGLMGL 308 >gi|329917232|ref|ZP_08276456.1| putative high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Oxalobacteraceae bacterium IMCC9480] gi|327544599|gb|EGF30079.1| putative high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Oxalobacteraceae bacterium IMCC9480] Length = 307 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 96/307 (31%), Gaps = 8/307 (2%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +YI + + +IY M A G ++ G L ++ + +GA++ + S + +S+ + Sbjct: 4 QYIFNGLMLGVIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFA-GLATSVWVISLGITS 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + + + L I L + +L T + + + Sbjct: 63 PWVQLAAVVISAVCVTGLLGAAIARFLILPLHKAPPLNTLLATLMLGTVLREAVRLFYPD 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +L+ I +L A + + RT + A R + + Sbjct: 123 GSNPKPFPALLPTDTLAFGSFILRADSVILLFSGLAAIAGVHFLITRTRLGMAIRAVAQD 182 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + L FA+ S +AG I+ ++ +I + ILG Sbjct: 183 GETARLMGINFEAVVLMTFALGSGLAALAGVMNGLYYSEINFNV-GLLLGVIGFAAAILG 241 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ + + F + + +++ + Sbjct: 242 GLGNIYGAIIGGFLFAALQVFGSAALPAL------FPNIASAYKDVFAFAVVIILMAWKP 295 Query: 337 HSLLRLR 343 L+ + Sbjct: 296 TGLIAEK 302 >gi|330810582|ref|YP_004355044.1| High-affinity branched-chain amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378690|gb|AEA70040.1| putative High-affinity branched-chain amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 305 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 93/303 (30%), Gaps = 17/303 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + ++ A GL+I+ G +G++++ IGAY+ + S P Sbjct: 17 NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTIGAYTTYVCSSLTSHFTPWFQPYYF 76 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 I+ A ++ + + + +L W + + Sbjct: 77 FIAIALSFLVAGAIGWLVEWA--MISRLYKRPLDTLLATWGLSLVMQQTFRSVFGAREVS 134 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 T + + + +++ L+ +I L L R+ R N+ Sbjct: 135 ATPPEWLMGSFNFTESIEIPRNGLFMMALTLLLTGAIFLLLYRSRWGLQVRATVQNRLMS 194 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ FA+ G+AGA A + + + +V+ GG S Sbjct: 195 RAVGINTRKVDRMTFALGCGVAGVAGA--AFTTIGSTGPTAGSQYIVDTFLVVVFGGAQS 252 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + ++ + +L + L++++R L Sbjct: 253 LFGTIASAFVIAQTQSISEFFLSGSMAKVLTLS-------------GVILILMLRPQGLF 299 Query: 341 RLR 343 ++ Sbjct: 300 SIK 302 >gi|163844224|ref|YP_001621879.1| hypothetical protein BSUIS_B0028 [Brucella suis ATCC 23445] gi|163674947|gb|ABY39057.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 406 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +YY+ L S ++ L T Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|148261914|ref|YP_001236041.1| inner-membrane translocator [Acidiphilium cryptum JF-5] gi|326405418|ref|YP_004285500.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|146403595|gb|ABQ32122.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidiphilium cryptum JF-5] gi|325052280|dbj|BAJ82618.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 311 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 112/274 (40%), Gaps = 13/274 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 +Q++ + +FA G ++++G GLLSL + +G Y + S + + + + Sbjct: 30 FVMQVMCFALFAMGANLLMGYTGLLSLGQAAFFGMGGYVAGYMIQTMHASTEVGLLLGGL 89 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + A G++ G +++ + Y A+ TL ++++ ++ T G+ GI R Sbjct: 90 TAAAIGVVFGWLAIRRQTIYFAMITLALAQLVYFFAVQDTGFTGGENGIQNIPR------ 143 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F S + + +Y+++ + L + + + + IR+N+ Sbjct: 144 -------GALFGSIPLHADKQIYWLVFAVFILGFLFVHRVIHSPFGQVVKAIRENENRAI 196 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 SL + K F +++A G+AG A + + +V+ +V++GG+ ++ Sbjct: 197 SLGYKVEHYKWIIFVLAAALGGVAGGLNALVVRIATLTDVGNVTSGLVVLMVLVGGIGTV 256 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 AI++ + + + + Sbjct: 257 FGPLVGAAIIVAMQYYLASFSDWVTVIQGTIFIA 290 >gi|296135401|ref|YP_003642643.1| inner-membrane translocator [Thiomonas intermedia K12] gi|295795523|gb|ADG30313.1| inner-membrane translocator [Thiomonas intermedia K12] Length = 293 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 96/299 (32%), Gaps = 23/299 (7%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 + + GL+++ G + +++L +GAY+ ++ +G + +P + G Sbjct: 18 FSLIGIGLNLIFGVMRIINLAHGQFIVLGAYAAWLVSRHFGFNPLWGVPTVIGAAIVIGY 77 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + + L F + + +T G + + Sbjct: 78 PLYYAVVPRLQRSGDPEMLSFILFF-GVGQMLEALTGLGFGADQRSLPSEALGSGNLGVF 136 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 FP S+ ++ ++ L+ RT + A R I +++ + + Sbjct: 137 GQEFPDSW-------WWAAGVSIAAIVALWLYFTRTRLGYATRAIMASREEALATGINVN 189 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 AF A G+AG F +SPD S +IVI+G + + Sbjct: 190 KVSALAFVAGLALAGVAGVFLPYLLGSVSPD-LGDSLTTTSFAIVIIGSLGNPLGTIIGG 248 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L + N + + L +++L+R LL S Sbjct: 249 LVFGLGTMLMQTYYSSWSN--------------LVPYVLLLVIVLIRPTGLLGKAVRSV 293 >gi|124268772|ref|YP_001022776.1| branched-chain amino acid ABC transporter permease [Methylibium petroleiphilum PM1] gi|124261547|gb|ABM96541.1| branched-chain amino acid ABC transporter, permease protein [Methylibium petroleiphilum PM1] Length = 304 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 90/301 (29%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+I+ G +G++++ IGAY+ + + L+P + Sbjct: 18 LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIFLGSTLTEKFAPTLVPYYFPV 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + L + +L W + + T Sbjct: 78 AIVLAFVFAFIVGWGVEWGL--IRHLYKRPLDTLLATWGVSLGLQQVFRTFIGPKEVSPT 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P + I +VL ++ +++ L ++ R N+ + Sbjct: 136 LPDWLLGSWAPHEGLDIPINGLFVLGLTALVTTLVLIALYKSRWGLRVRATVSNRTMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + FA+ G+AGA A + + + +V GG SL Sbjct: 196 IGINTMKTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLF 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +L + L+++ R L + Sbjct: 254 GTVVSAFGIAQTQSISEFFMTGSMAKVLTLS-------------LIVLILMFRPQGLFAV 300 Query: 343 R 343 + Sbjct: 301 K 301 >gi|331018978|gb|EGH99034.1| inner-membrane translocator [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 300 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+IV G +G++++ A+G+Y+ + + L+ +I Sbjct: 14 FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSVVFQRYFPELMGWYFII 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + + +L W + + Sbjct: 74 GIGVAFVVTFAFGFLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ S + + +++ ++A++ ++L R+ R + N+ + Sbjct: 132 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAAVFVFLYRSRWGLRIRAVTQNRAMAGA 191 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AG+ F + + + +V+ GG+ SL Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + +++ R + L Sbjct: 250 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296 Query: 343 R 343 + Sbjct: 297 K 297 >gi|209551968|ref|YP_002283884.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539561|gb|ACI59492.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 342 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 113/334 (33%), Gaps = 17/334 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 ++ +L + ++ ++F +G S + + Q+L++V L + G G++S Sbjct: 10 RWQPVLLICVLLTAFVVFSAVGNLLSTREV----TQVLMWVAIVTSLYVYTGVTGIVSFG 65 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 +IGAY+ +L S + + + Y +I+ Sbjct: 66 HTAFASIGAYTAAVLTINPLFK----------TSTLVDLPEFILTRAIPTAYAIPVGVIV 115 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY--YVL 187 + + G+A + V S ++ ++ + + Sbjct: 116 ATAVAVPIGLAIGRLRGEATTIGTFAFLLVIYAVFSNWDGVTGGTTALVGIPLVVGKWAA 175 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L I R ++ RD++ A + + +L AF +S+A + GA Sbjct: 176 LAGSIAIVVIAYAFRISSTGRQLVAARDDEAAASACGVDVGKLRLRAFVLSAALMSFCGA 235 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 + S +S D F + ++++++GG SLS + + + Sbjct: 236 LSSGSIGVLSVDSFHVGATSMALAMLVVGGRNSLSGAVTGGLAVALAMIFLRHVEQGIDL 295 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 K + + + L+++ R L+ Sbjct: 296 GGTKLSLPGGSQELAVATF-MLLILVRRPLGLMG 328 >gi|163735016|ref|ZP_02142453.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] gi|161391798|gb|EDQ16130.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] Length = 379 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 100/364 (27%), Gaps = 39/364 (10%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 MSI S RL I+ + + + L + ++ + L Y A GL + Sbjct: 1 MSIASNRLFTRQDIVGFAILAGIIFIVL---PLALDGFRLNLFGKYLTYAFVAVGLVLCW 57 Query: 61 GSLGLLSLNCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGM 108 G+ G+LSL + + +G Y + + Sbjct: 58 GAGGILSLGQGVFFGLGGYCMAMFLKLEASTPENTAIQSTPGIPDFMDWNQLSALPWWWE 117 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYF 158 + + + I Sbjct: 118 PFANLAFALFAVVAVPVIFAFIIGMAMFRRRVGGVYFAIITQAFAAILTILIIGQQGFTG 177 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L + + +YYV + F+ I ++R++ + +RD + Sbjct: 178 GVNGITDLRTLQGWDIRTEAAKETLYYVNGVLLFICLFIAQFVRKSKLGRLLIAMRDQED 237 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + K+ F + +AF G+ GA F +SP + +I ++ +GG Sbjct: 238 RVRFSGYDVASFKIFIFCLGAAFAGIGGAMFTLQVGFMSPTLVGIVPSIEMVIFCAVGGR 297 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ SF + V+++ + Sbjct: 298 LSIIGAVYGALLVNWAKTSLSE--------------SFPELWLFGLGGLFIAVVMLFPNG 343 Query: 339 LLRL 342 L L Sbjct: 344 LAGL 347 >gi|161620117|ref|YP_001594003.1| inner-membrane translocator [Brucella canis ATCC 23365] gi|260568629|ref|ZP_05839098.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40] gi|161336928|gb|ABX63232.1| inner-membrane translocator [Brucella canis ATCC 23365] gi|260155294|gb|EEW90375.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40] Length = 406 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +YY+ L S ++ L T Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|256014821|ref|YP_003104830.1| branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|255997481|gb|ACU49168.1| branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] Length = 406 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +YY+ L S ++ L T Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|225418765|ref|ZP_03761954.1| hypothetical protein CLOSTASPAR_05989 [Clostridium asparagiforme DSM 15981] gi|225041711|gb|EEG51957.1| hypothetical protein CLOSTASPAR_05989 [Clostridium asparagiforme DSM 15981] Length = 351 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 105/310 (33%), Gaps = 24/310 (7%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + ++ ++ L + L + ++ QI + A G ++V+ G + L+ Sbjct: 27 ILMIFLILCLGIQLLTPKFLKPANLINIMRQISNVGIMAVGEAMVIIIAG-IDLSVGATL 85 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 ++ A L ++ WL + V+ + + GMI G S+K ATL + + Sbjct: 86 SLSACVAAYLAQ--MINPWLAVLVALLTGLSIGMINGFLSVKIGIAPFI-ATLGTQMMAR 142 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + + +++ + +L M + Sbjct: 143 GLAFMVT---------------AGIPIKFSNAASVLGGGRIALPWKLQLPVPILFMLAIY 187 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I+ + +T + DN+K+ K++A+ VS +AG +A + Sbjct: 188 IIGIVVMTQTVFGRNIYAVGDNEKSAKLSGINSDRIKITAYVVSGFLAAVAGILYAGNLT 247 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 E ++ ++VI GG S+ I AI+ + +NF Sbjct: 248 TAEASAGDGIETNVIAAVVIGGVSMAGGEGSVVGILIGAAIMGVIKNAFILLNFPATMQT 307 Query: 310 LKFDCSFNMR 319 + Sbjct: 308 FTIGLMIVLA 317 >gi|254510385|ref|ZP_05122452.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] gi|221534096|gb|EEE37084.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] Length = 336 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 35/334 (10%), Positives = 88/334 (26%), Gaps = 19/334 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 FL S + + A G++++ G L + A GA V++ Sbjct: 3 FLNALVALSNFVLVPAIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGAMIAVLVTW 62 Query: 87 RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + L +P + + +I +F + A +++ + Sbjct: 63 GLQAAGISFGPLPTALLALPFAILGCIVLVLITDRLVYRFYREQKAKPVILVIVSMGVMF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + + + ++ A + Sbjct: 123 IMNGLVRFIIGPDDQRFSDGARFIVSARDFKEMTGLREGLAIKTSQGITVIVAVVAVALL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L +T + R DN+ + + + +A AG + + Sbjct: 183 FWFLNKTRTGKSMRAYSDNEDLALLSGINPERVVMITWVIVAALATTAGVLYGLDKSF-- 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309 F + + + I+GG+ + I+ + + Sbjct: 241 KPFVYFQLLLPIFASAIVGGLGNPLGAIAGGFIIAFSEVTITYAWKKVLTYLAPEQLAPS 300 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L +V+L + L + + Sbjct: 301 GLVQLLSTDYKFAVSFVILLIVLLFKPTGLFKGK 334 >gi|330974157|gb|EGH74223.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str. M302273PT] Length = 300 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+IV G +G++++ A+G+Y + + L+ +I Sbjct: 14 FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYMTYVTSVVFQRYFPELMGWYFII 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++ + + +L W + + Sbjct: 74 AIGMAFVVTFAFGLLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ S + + +++ ++A++ L+L R+ R + N+ + Sbjct: 132 TVQWLQGAWKISDGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AG+ F + + + +V+ GG+ SL Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + +++ R + L Sbjct: 250 GTFLSAFAIGQTQVSLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296 Query: 343 R 343 + Sbjct: 297 K 297 >gi|260913308|ref|ZP_05919789.1| ribose ABC superfamily ATP binding cassette transporter, permease protein [Pasteurella dagmatis ATCC 43325] gi|260632539|gb|EEX50709.1| ribose ABC superfamily ATP binding cassette transporter, permease protein [Pasteurella dagmatis ATCC 43325] Length = 342 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 97/288 (33%), Gaps = 11/288 (3%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ + + + ++G+Q + G +IV+ G + L+ A Sbjct: 15 LAGLILLVITFTFTNEYFFTLNNVLTIGLQTSTIALIGIGATIVI-LTGGIDLSTGSVVA 73 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + ++ + L I ++ G CG+ G+ R ATL + + Sbjct: 74 LSGVAAAMVVNAGVPVP-LGILFGILVGGLCGLANGMIVTVMRLPPFI-ATLGTMMVARG 131 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + +TN + + LG I ++ + Y ++ M F++ Sbjct: 132 LAL---YVTNAAPVSGMPESFAELGNGALFRIVEEGANGLPIVKFPGIPYPVIIMIFIAI 188 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 L + + I N++A K A+ S G+AG A+ Sbjct: 189 LFTFALSKLKVGRYIYAIGSNEEAARLSGIKTNQVKNYAYIASGLLSGLAGVILASRLVT 248 Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298 P+ E + S V+ +GG+ ++ + I+ + Sbjct: 249 AQPNGGVAYELDAIASAVVGGTSLMGGVGTIPGTLIGSFIIGVLRNGL 296 >gi|258624814|ref|ZP_05719742.1| D-ribose transport system permease protein [Vibrio mimicus VM603] gi|258582812|gb|EEW07633.1| D-ribose transport system permease protein [Vibrio mimicus VM603] Length = 333 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 96/312 (30%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 35 LIALLFLVVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + ++ + + L +P + + G I G+ K + + M+ Sbjct: 94 LCG-AFAASLIAMEVPVLLAVPTALLAGAVLGAISGIIIAKGKVQAFIATLVTMT----- 147 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G +Y R G T + + + + ++ +++ Sbjct: 148 -------LLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWY 200 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + T + N+ A + K+ +A+ +AG + Sbjct: 201 LL----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 317 AKAVVILLAVLV 328 >gi|222111253|ref|YP_002553517.1| inner-membrane translocator [Acidovorax ebreus TPSY] gi|221730697|gb|ACM33517.1| inner-membrane translocator [Acidovorax ebreus TPSY] Length = 353 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 112/330 (33%), Gaps = 19/330 (5%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + + + +L F+ +T + + + ++I+ + A GL++V G + +L+ Sbjct: 34 WTPLALVPLLAIAVLPFIGSASTWLTLTVAGLAMGMIIF-IIASGLTLVFGLMDVLNFGH 92 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI--ATLI 128 + A+GA+ + +++ M + + G + Sbjct: 93 GVFIALGAFVATSVLGAMSDWTGSAALWRNLVAVLPAMAVAMLVAGAVGLAFERLIVRPV 152 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + + ILI + G+ I V + + +R + + + V + Sbjct: 153 YGQHLKQILITMGGMIIGEELIKVIWGPQQIPLPLPEAMRGAWLVGEAAVEKYRVLAVGV 212 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 G+ A + L RT + R +++ SL + + F SA G+ G Sbjct: 213 GLAV-FALLAWTLARTKLGLLIRAGVQDREIVESLGYGVRRLFVGVFVAGSALAGLGGVM 271 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + + + P M N+++ ++I+GG+ S ++ + + Sbjct: 272 WGLYQQNVVPQM-GAQVNVLIFIVIIIGGLGSTGGALIGALLVGLMANYTGFLLPKVALF 330 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + ++L R Sbjct: 331 SN--------------IALMVAILLWRPQG 346 >gi|197303960|ref|ZP_03168992.1| hypothetical protein RUMLAC_02697 [Ruminococcus lactaris ATCC 29176] gi|197296928|gb|EDY31496.1| hypothetical protein RUMLAC_02697 [Ruminococcus lactaris ATCC 29176] Length = 550 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 29/318 (9%), Positives = 79/318 (24%), Gaps = 9/318 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y I+ + + + + + I ++ Q + A G++ ++ G L+ Sbjct: 227 YIVIILIFIALCIITPIVKNTQLFTYTNILNILQQASPRMFLALGVAGLILLTG-TDLSV 285 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G + I+ + + ++ Sbjct: 286 GRMVGMGMVTATIIMHNGINTG--SVFGHIFDFSNMPAATRAILALLVCILFTTVFSCIA 343 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F I+ + + + + V P+ F+ ++L Sbjct: 344 GFFMARFKMHPFISTMANMLIIFGLVTYATKGVSFGAIDAAIPNMFIPQIGSFPTIILWA 403 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + +T + N +A ++ L AF ++ G Sbjct: 404 VVAIVVVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFKVTLGAFILAGILYGFGSWLEC 463 Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304 + ++ I+ ++ GG+ +S + I + + Sbjct: 464 NRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVLIFTSLTYSLTILGID 523 Query: 305 YFNSLLKFDCSFNMRHTT 322 + T Sbjct: 524 TNLQFIFEGIIILAAVTL 541 >gi|206559789|ref|YP_002230553.1| branched-chain amino acid transport system family protein [Burkholderia cenocepacia J2315] gi|198035830|emb|CAR51721.1| branched-chain amino acid transport system family protein [Burkholderia cenocepacia J2315] Length = 409 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 100/293 (34%), Gaps = 12/293 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + Q V+ A ++ +G+ GLLS +GA+ Sbjct: 12 WALFAACVALPAWLWPHGAVLGYLAQTAALVVLALSYNLQLGTTGLLSFGHAAFAGLGAF 71 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + G + LL V + G + GL + + G A+ TL + E Sbjct: 72 AAAHWFNHVGGPLPLLPLVGGVAGAGFGFVAGLLATRRSGTAFAMITLGLGECVAAAAWS 131 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 G G+ + + + + Y V+ C +SA + Sbjct: 132 VPAWFGGLGGVPI------------DRASGASWGNGYFGAPAHAYAVIAAWCVVSACAMH 179 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 L RT ++ +RDN +L T +L+ +S F G+AG + +PD Sbjct: 180 ALTRTPLARLANAVRDNPARVAALGTDPRRVRLAMVTCASFFAGIAGTLTLIDVEIATPD 239 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + + V+ ++GG + A A+L + + G++ + L Sbjct: 240 SVSMARSATVLIAAVIGGTGAFFGPAVGVAVLTALSIVVAGVSRAWALYLGVL 292 >gi|146341679|ref|YP_001206727.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146194485|emb|CAL78510.1| putative ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 350 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 117/323 (36%), Gaps = 28/323 (8%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 L + ++ + LI A L + G G++SL + Y + G Sbjct: 30 ILPVIANGFFLIEIFGTTLILGTIALSLMFLAGYGGMVSLMQLTIAGFAGYMVAVFGVSG 89 Query: 89 G------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 WL PV+ +++ G + G +++ G Y + TL + F + Sbjct: 90 NANISLGWPWWLATPVALVLAVLFGTLGGALAVRTEGIYTIMITLAIGAAFYYFTNQNWA 149 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 I NG GI +FLG R+ + YY++L + L ++++L Sbjct: 150 IFNGHTGINTIATPHFLGIDWRAD--------------VAFYYLILAVAALCYFVVVYLS 195 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 R A + +RDN + +L + +++A+A ++ G+ G + +ISP Sbjct: 196 RAPFGLALQGVRDNPRRMAALGFNVNAHRIAAYAFAALIAGLGGVLQVWNYRQISPGSVA 255 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 I ++ + ++GG+T I + + +F Sbjct: 256 VERCIDILIVAVVGGITRPVGPYIGAFIFVILRTFALDFLVKVGLDGNRFR--------L 307 Query: 323 LMVIALFLVILMRSHSLLRLRTP 345 L+ + ++ S ++ L Sbjct: 308 LIGLGFLAIVFWSSDGVIGLYER 330 >gi|332652798|ref|ZP_08418543.1| galactoside ABC transporter, permease protein MglC [Ruminococcaceae bacterium D16] gi|332517944|gb|EGJ47547.1| galactoside ABC transporter, permease protein MglC [Ruminococcaceae bacterium D16] Length = 550 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 30/325 (9%), Positives = 86/325 (26%), Gaps = 9/325 (2%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F L+ Y I+ + + + + + + ++ Q + A G++ ++ Sbjct: 220 FFLKNGLYLAIIVIFIALCIITPIVKNTQLLTMNNVLNILQQASPRMFLALGVAGLILLA 279 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G L+ +G + I+ + + + ++ + L Sbjct: 280 G-TDLSIGRMVGMGMTAATIIMHQGINTG--SVFGHIFDFTGLPVVARILLALVVCIVLC 336 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 ++ F I+ + + + + V PS + Sbjct: 337 TIFTTIAGFFTAKFKMHPFISTMANMLVIFGLVTYSTKGVSFGAIDPSIPSMIIPRIGKF 396 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 ++L + +T + N +A ++ + AF ++ G Sbjct: 397 PTIILWAVAAIIIVWFIWNKTTFGKNLYAVGGNPEAASVSGISVFLVTVGAFVMAGILYG 456 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297 + + I+ ++ GG+ +S + I + Sbjct: 457 FGSWLECIRMVGSGSAAYGQGWEMDAIAACVVGGISFTGGIGKISGVVVGVFIFTALTYS 516 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322 + + + T Sbjct: 517 LTILGIDTNLQFVFSGIIILVAVTL 541 >gi|301059504|ref|ZP_07200417.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] gi|300446399|gb|EFK10251.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] Length = 333 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 112/333 (33%), Gaps = 38/333 (11%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 L Y ++L LL ++ L Y + I +Y + A +++ GLLS Sbjct: 22 LTSYREMLYLLIPGAIPVVGLLCFTPILSDYWREVMISTAVYALLAMSWDMLM-CAGLLS 80 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L + + IG+Y L GL L +P++ + G ++ LP L+ RG Y A+ TL Sbjct: 81 LGQSLFFGIGSYLAGSLNYYAGLPPILTMPIATIGGGVLCTVLLLPVLRLRGVYFAMVTL 140 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 ++ + L++ I G G+ ++ +V+ Sbjct: 141 VLPLMLSR-LVEATRILGGTEGLTGLTPFPN---------------------QLTALFVI 178 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + + I DN ++ S I + K + + AGA Sbjct: 179 QLALLAVLFGFRRIMGSDYGLVIKGISDNDRSVMSAGLNIYWYKTQVLFLGACVGCFAGA 238 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F F +++ ++ ++GG + + IL+ + E+ + Sbjct: 239 FGTHMDMFAGMPGFALDYSLMPVASAVVGGTGTFAGPLIGAFILVPLSEMLRAL------ 292 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + L + ++ + Sbjct: 293 ---------GALRIVFYGLFLVIFVVGLPEGIF 316 >gi|330978920|gb|EGH77979.1| high-affinity branched-chain amino acid ABC transporter permease BraE [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 152 Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 15/147 (10%) Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I L R I AW +R+++ A S+ + KLSAF + ++ G+AG FFA+ + Sbjct: 1 MFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQG 60 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++P F F E+ ++++IV+LGGM S + A +L EL + Y Sbjct: 61 FVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY---------- 110 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 L I + L+++ R L+R Sbjct: 111 -----RVLLFGILMVLMMIWRPRGLIR 132 >gi|256112071|ref|ZP_05453007.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] gi|265993513|ref|ZP_06106070.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] gi|262764383|gb|EEZ10415.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether] Length = 360 Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 105/311 (33%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHVMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +YY+ L S ++ L T Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQVINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + L LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLILVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|197121847|ref|YP_002133798.1| inner-membrane translocator [Anaeromyxobacter sp. K] gi|196171696|gb|ACG72669.1| inner-membrane translocator [Anaeromyxobacter sp. K] Length = 288 Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 91/289 (31%), Gaps = 13/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S + +Y + GL+++ G + + + +G Y + + + +L I + Sbjct: 8 VLSGLLVGGVYALIGIGLTLIFGVMRVTNFAHGELLMLGMYLAWLAFTGLHIDPFLSIVL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A G + + L ++++ I+ + Sbjct: 68 VAPAMFLWGAFLQKSFVNRVLGALPQNQILLTIGLGLIMSNTVMLI-----------FTS 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + + + Y L ++ ++ +L +T A R ++ Sbjct: 117 DYRILTTTYSSSSYKLAGLSISQPLLYAFLITVAITGALYWFLLKTDTGQAIRATAQDRD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + AF + SA G AGA + + + + IV+LGGM Sbjct: 177 AAQLMGINVRRMSVLAFGIGSALAGTAGALISPTYYI--FPQVGSAFTLKAFVIVVLGGM 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ I+ L L+ F + + Sbjct: 235 GSVVGATLGGIIIGVAESLSAVYIASGLKELVTFVLFLALLLFKPAGLL 283 >gi|239940460|ref|ZP_04692397.1| branched chain amino acid transport permease [Streptomyces roseosporus NRRL 15998] gi|239986943|ref|ZP_04707607.1| branched chain amino acid transport permease [Streptomyces roseosporus NRRL 11379] gi|291443891|ref|ZP_06583281.1| branched chain amino acid transport permease [Streptomyces roseosporus NRRL 15998] gi|291346838|gb|EFE73742.1| branched chain amino acid transport permease [Streptomyces roseosporus NRRL 15998] Length = 309 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 92/305 (30%), Gaps = 8/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y + A G ++V G + L++ + G + + + +L+ + Sbjct: 8 LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMTGGFGALTVWLILPSGTNVLLAL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 MI GA + + R Y + LI ++ A Sbjct: 68 PLMIIGAIIVATTIAVGAERFAYRPLRG----GPRLAPLITAIGLSLALQQAVWAWYPGA 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I F V + ++L+ A + ++ +T + + Sbjct: 124 KSARTFPEIPGGPFELGPVTIQTGDVFLLIAAPLSMAFLGYFVMKTRTGRGMQATAQDPD 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + AFA+ +AF + + + M F + + +LGG+ Sbjct: 184 TAKLMGINTDRIIVVAFALGAAFAAIGAVAYGLKYGEVQFRM-GFLLGLKAFTAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ L + S+ +++I + L R Sbjct: 243 GNIYGAMIGGLTLGVAETMAAAYISEVPGLEQLGGQSWANAWAFVLLILVLLF---RPQG 299 Query: 339 LLRLR 343 +L R Sbjct: 300 ILGER 304 >gi|229522799|ref|ZP_04412213.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae TM 11079-80] gi|229526243|ref|ZP_04415647.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae bv. albensis VL426] gi|229527889|ref|ZP_04417280.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae 12129(1)] gi|254225889|ref|ZP_04919492.1| ribose ABC transporter, permease protein [Vibrio cholerae V51] gi|125621616|gb|EAZ49947.1| ribose ABC transporter, permease protein [Vibrio cholerae V51] gi|229334251|gb|EEN99736.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae 12129(1)] gi|229336401|gb|EEO01419.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae bv. albensis VL426] gi|229340016|gb|EEO05024.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae TM 11079-80] Length = 333 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 35 LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 94 LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 141 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 142 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWYL 201 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 202 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 317 AKAVVILLAVLV 328 >gi|86748378|ref|YP_484874.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86571406|gb|ABD05963.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 308 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 94/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + S + + L P + Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSSAFQAYLPSLFPGYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + I L + +L W + +G Sbjct: 82 AMILAFIAAGALGMLVEWGL--IRHLYKRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + + I +V+ ++A++ + ++ R + N+ + Sbjct: 140 LPQWMLGSKQITDTIEVPINGIFVMCLTFLITAAVAYVMYKSRWGRQVRAVVQNRVMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + G+AG+ F + + +V+ GG SL Sbjct: 200 VGINTEKVDRYTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLF 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ ++++R L L Sbjct: 258 GTIASAFSISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMVRPQGLFAL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|293603213|ref|ZP_06685646.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818444|gb|EFF77492.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 306 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 97/308 (31%), Gaps = 15/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL++V G + +++L Y GAY R G ++ Sbjct: 10 LLNGLQFGLMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRTGSFTAAVLVA 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ K L + + +L + I + + Sbjct: 70 AVATGLVGVVLELTLIRK----------LALRDHLAQVLGTYAVILIANDLVKMIWGPAP 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +++ ++Y + +++ +A + ++ RT R N++ Sbjct: 120 VMLNMPAVLSGPVRLMPDLLYPAYRLMIIVFGVAAAAGLYWFVTRTRAGVLVRAGASNRQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + L F + + +AGA I+V+ +++GG+ Sbjct: 180 MATLMGVRVPLLFLGVFVLGAMLAAVAGALLGPITSV--QVGMGEEILILVLVCIVIGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335 S+ ++ V + + + + + V++ R Sbjct: 238 GSIRGAFVGALLVGMVDTAGRAFLPMLLRQVFSPAVASSVGPTLAAIAIYVLMAAVLVFR 297 Query: 336 SHSLLRLR 343 L R Sbjct: 298 PSGLFPAR 305 >gi|319956564|ref|YP_004167827.1| amino acid/amide ABC transporter membrane protein 1, haat family [Nitratifractor salsuginis DSM 16511] gi|319418968|gb|ADV46078.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Nitratifractor salsuginis DSM 16511] Length = 297 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 85/269 (31%), Gaps = 12/269 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ +GA+ G + + V Sbjct: 10 LVNGASLGSMYALIAIGYTMVYGVLRLINFAHGDIMMVGAFLTY-FAYNAGAPFSVAVLV 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G++ + K D I+ LI + L + G Y Sbjct: 69 GILGAVIVGVLTDKIAYKPLRDAPKISLLITAIGISFFLENLFNVLFGGVPRAFKAPEYL 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + I + + + +++ L RT A R + + Sbjct: 129 TKV----------FHWGSIYLPISVIIIPTVTVAILVAVLWVLYRTKYGMAIRALAFDIP 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ SA + G F+A S I P M + + +LGG+ Sbjct: 179 TVKLMGVNADSIISIVFALGSALAAIGGVFYAISYPSIDPLM-GVMVGLKAFAAAVLGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFN 307 S++ IL + + Sbjct: 238 GSVTGAVLGGFILGFTEIMVVAIFPELGG 266 >gi|302186598|ref|ZP_07263271.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642] Length = 300 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 92/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+IV G +G++++ A+G+Y + + L+ +I Sbjct: 14 FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYMTYVTSVVFQRYFPELMGWYFII 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + + +L W + + Sbjct: 74 GIGMAFVVTFAFGLLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ S + + +++ ++A++ L+L R+ R + N+ + Sbjct: 132 TVQWLQGAWKISDGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AG+ F + + + +V+ GG+ SL Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + +++ R + L Sbjct: 250 GTFLSAFAIGQTQVSLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296 Query: 343 R 343 + Sbjct: 297 K 297 >gi|270262012|ref|ZP_06190284.1| inner-membrane translocator [Serratia odorifera 4Rx13] gi|270043888|gb|EFA16980.1| inner-membrane translocator [Serratia odorifera 4Rx13] Length = 316 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 99/317 (31%), Gaps = 19/317 (5%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS---------YVILGSRYGL 90 + + IY + A G ++V G L +++ +GA S + Sbjct: 9 VNGLMLGSIYALIALGYTMVYGILRIINFAHGDVLMVGALSALSAIGVLQHHFPTLSPYT 68 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + L ++ + M + + + + +A LI +L + + + Sbjct: 69 VLLLATTIAMAVCALVSMSIERLAYRRLRNAPRLAPLISGIGVSLLLQTLAMLIWSRNPL 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L + + +L M A ++L + + A Sbjct: 129 MFPQLLPMSPIALTQGSAGHAPAVITGTGIATLVVAVLVM----AGLLLLVEHSRFGRAM 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +N + + L FA+ A +AG A++ M F I Sbjct: 185 RATAENPQVAGLMGIDPNRVILLTFALGGALAAVAGVMMASNYGNAGFSM-GFLPGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ +L A+L G++ + L + + L Sbjct: 244 TAAVLGGIGNLR-----GAMLGGLLLGLFESLGTGYLGELTGGTFGSNYQDVFAFLILIA 298 Query: 331 VILMRSHSLLRLRTPSN 347 V+++R LL R + Sbjct: 299 VLVLRPSGLLGERVATR 315 >gi|220921739|ref|YP_002497040.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219946345|gb|ACL56737.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 306 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 98/313 (31%), Gaps = 29/313 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + + A+ + V+ Sbjct: 8 LINGLTLGSIYGLIAIGYTMVFGIIGMINFAHGDVFMLSAFIALIVFLILTTVLGIGSVV 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L++ L++ V+ ++ G + + + +A LI + L + + G Sbjct: 68 LALILVMIVAMALTALWGWSIERIAYRPLRGSFRLAPLISAIGVSIFLSNFVQVVQGARN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + + V ++L + ++ T++ A Sbjct: 128 KPTPPMMRDVIVLWTGE------NGYAVALSYKQIIIMLVTGVMLLGFWYLVQHTSLGRA 181 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + +A +AG + +S F + Sbjct: 182 QRACEQDRKMAALLGIDVDRTISLTFVLGAALAAVAGTMYLLYYGVVSF-SDGFVPGVKA 240 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL I+ + + + F L Sbjct: 241 FTAAVLGGIGSLPGAVLGGLIIGLIETFWSAYFSIEYKDVAAFS-------------ILA 287 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 288 IVLIFMPSGILGR 300 >gi|163795202|ref|ZP_02189170.1| branched-chain amino acid ABC transporter, permease protein [alpha proteobacterium BAL199] gi|159179600|gb|EDP64129.1| branched-chain amino acid ABC transporter, permease protein [alpha proteobacterium BAL199] Length = 282 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 37/306 (12%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y S+ I I V FA L++V G G +SL GAY + + + Sbjct: 4 AYEISLLTTIGIAVTFALSLNLVTGFCGQISLGHAAFLGTGAYVAAMSVVAGAP-FAVGL 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +++ A G ++GL SL+ R D+LAI T+ + +F + + G+ GI Sbjct: 63 IAGGLVAAAVGAVVGLASLRVRHDFLAITTMGVGFLFVG-FTRQQDWLGGEMGIAGIPEA 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F + + V LG+ +A+ ++L+RT + A+ I + Sbjct: 122 PFGK--------------------VGLMVVALGVAAATAAFSVYLKRTWMGFAFDAIAAD 161 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + ++ + KL+AFA+ + G+AG +A + I+PD F F E++ V+++V++G Sbjct: 162 EDTARTVAIDVSRYKLAAFALGTGIAGLAGGLYAFNIRFIAPDSFGFVESVTVLAMVVIG 221 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ + A A L + + ++ Y L + LF V+ + Sbjct: 222 GIGSVLWVTVAAAALAVLPQWFQAVDDY---------------KLLLYGVLLFTVMRLSP 266 Query: 337 HSLLRL 342 L L Sbjct: 267 GGLAGL 272 >gi|90419447|ref|ZP_01227357.1| putative ABC transporter permease protein [Aurantimonas manganoxydans SI85-9A1] gi|90336384|gb|EAS50125.1| putative ABC transporter permease protein [Aurantimonas manganoxydans SI85-9A1] Length = 308 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 95/307 (30%), Gaps = 15/307 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + ++ + A GL+++ G + L++L + Y +GAY L + G L Sbjct: 10 LNGLQFGILLFLVAAGLTLIFGIMDLINLAHGVLYMVGAYLVATLTAYTGDFFLGLALTI 69 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ L + L + + + + + Sbjct: 70 PATLLFGIILEVLIFRRLYDRDHLDQVLATFGLILILNEGVQMLWGAAPMSVPIPDVLSG 129 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + Y +F ++ + + + + T I R N Sbjct: 130 SMPL----------IGNMRYPLFRVLIIAAGLATALGLYILVSHTRIGMRLRAGATNAPM 179 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L I + FA+ + G AGA A S I+ ++++GG+ Sbjct: 180 ISALGVDIRRLFMLVFALGAMLAGFAGAMVAPILSV--QPGMGDSILILTFVVIVIGGVG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336 S+ A ++ V L +L+ + T L+ I + V+ R Sbjct: 238 SVRGAFVAALLVGLVDTLGRTFGPILLRNLMDPSAASQTGRTLAPMLIYILMAAVLFFRP 297 Query: 337 HSLLRLR 343 L + Sbjct: 298 AGLFPAK 304 >gi|301383904|ref|ZP_07232322.1| inner-membrane translocator [Pseudomonas syringae pv. tomato Max13] gi|302063607|ref|ZP_07255148.1| inner-membrane translocator [Pseudomonas syringae pv. tomato K40] gi|302131016|ref|ZP_07257006.1| inner-membrane translocator [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 300 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+IV G +G++++ A+G+Y+ + + L+ +I Sbjct: 14 FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSVVFQRYFPELMGWYFII 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + + +L W + + Sbjct: 74 GIGVAFLVTFAFGFLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ S + + +++ ++A++ ++L R+ R + N+ + Sbjct: 132 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAAVFVFLYRSRWGLRIRAVTQNRAMAGA 191 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AG+ F + + + +V+ GG+ SL Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + +++ R + L Sbjct: 250 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296 Query: 343 R 343 + Sbjct: 297 K 297 >gi|283850452|ref|ZP_06367740.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] gi|283574023|gb|EFC21995.1| inner-membrane translocator [Desulfovibrio sp. FW1012B] Length = 294 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 95/302 (31%), Gaps = 21/302 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + +Y + A GL+++ G + +++ +G +S L G+ +L + + + Sbjct: 12 IMMGAMYGLTALGLTLIFGVMKVVNFAHGSLLMVGMFSAYWLIKLTGIHPYLALVIVPPV 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 G + +K ++ +I T Sbjct: 72 LFVFGYYLQDVVIKPVFKAERQVREPLT------VIIVTTGVWYVLDNLALMLFGAEYRT 125 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 VR+ I F I + + + + + L++R+T I A R +++A Sbjct: 126 VRTAISNKSFALGQYIISVPKFSGFVVAVLTAVGLALFMRKTKIGMALRATSLDREAANL 185 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + AF + +A G+AG F +I IV+LGG+ S+ Sbjct: 186 MGIDQYKVYNIAFGLGTAIAGIAGCVLIPFYYV--YPSFGVVFDIRAFIIVVLGGLGSIP 243 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + + + ++ +++ ++ Sbjct: 244 GALLGGLVIGVIESVFSQFMASTWTEA-------------IIYAIFLVILFVKPSGFFGH 290 Query: 343 RT 344 + Sbjct: 291 KQ 292 >gi|254503131|ref|ZP_05115282.1| amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222439202|gb|EEE45881.1| amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 400 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 38/325 (11%), Positives = 92/325 (28%), Gaps = 19/325 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + + + + S+ I I ++FA ++++G GLLS + + + Sbjct: 1 MLPFLIMAAVLAVIPLAGPSRTTYSLLNAIGINMVFALSYNMLLGRAGLLSFGHAVYFGL 60 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 G Y+ + L G G + G I + Sbjct: 61 GGYAAMHAMQAIEAGTGLWSMFPVFALPLVGFAGGAFAGAVIGWPSCRRAGIPFAMISLG 120 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + + AG + + +Y+ + + Sbjct: 121 IAELV----AAAGFMFTSLFGGEEGVSGDRMNGPEVFGLSLGPINEVYWFIAAWTLIGTI 176 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + RT + +RDN + + + F + F G+AG A + + Sbjct: 177 AMFAFTRTPLGKMGEAVRDNPERVEFVGYDPQRVRYLIFIFAGGFAGLAGGMAAVNYEIF 236 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 +P+ + V+ + +GG+ + +L + + Sbjct: 237 TPETLSVIPSGFVLLMAYVGGIRYFAGPMLGAVLLTYMQSNLSDFTEAW----------- 285 Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341 + + ++++ L Sbjct: 286 ----LLYLGLLFMMIVMFAPSGLAG 306 >gi|148257253|ref|YP_001241838.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409426|gb|ABQ37932.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 323 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 120/327 (36%), Gaps = 29/327 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + + + + ++ I ++I + A G +I+ G GL S + Sbjct: 6 LATLAIIVAALAVIAFAGLSGALLNLMIFMMIIALAAQGWNILGGYAGLSSFGHAAFFGA 65 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134 GAY+ +L +R+G++ W+ + + + G +G S + +G Y A+ TL +E+ + Sbjct: 66 GAYAMAVLQTRFGVNAWIALVIGIALGALVGAFIGFLSFRSGLKGSYFALITLAFAEVAR 125 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + W + P + + +G + Sbjct: 126 ILANSWNFTGGAAGILLKLQ---------------TGLPYLQFADRRYFLLITIGCVAIG 170 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + WL + +R+N++A +L + K+ A A+S A AG +A + Sbjct: 171 LVVSWWLEHSRFGAYLVALRENEQAAQALGVDVFAVKMKAIAISGALTAAAGCLYAQNYL 230 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I + F +I + I+GG ++ +L+G+ EL G++ Sbjct: 231 FIDANVAFGSWISIEALFAAIVGGSGTVLGPLIGAIVLLGLGELTKGLSG---------- 280 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340 + I L L + + L+ Sbjct: 281 -GIPGMDLLVFGIILVLSVAFSPNGLV 306 >gi|220916639|ref|YP_002491943.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] gi|219954493|gb|ACL64877.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] Length = 288 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 13/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S + +Y + GL+++ G + + + +G Y + + L +L I + Sbjct: 8 VLSGLLVGGVYALIGIGLTLIFGVMRVTNFAHGELLMLGMYLAWLAFTGLHLDPFLSIVL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A G + + L ++++ I+ + Sbjct: 68 VAPAMFLWGAFLQKSFVNRVLGALPQNQILLTIGLGLIMSNTVMLI-----------FTS 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + + + Y L ++ ++ +L +T A R ++ Sbjct: 117 DYRILTTTYSSSSYKLAGLSISQPLLYAFLITVAITGALYWFLLKTDTGQAIRATAQDRD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + AF + SA G AGA + + + + IV+LGGM Sbjct: 177 AAQLMGINVRRMSVLAFGIGSALAGTAGALISPTYYI--FPQVGSAFTLKAFVIVVLGGM 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ I+ L L+ F + + Sbjct: 235 GSVVGATLGGIIIGVAESLSAVYIASGLKELVTFVLFLALLLFKPAGLL 283 >gi|317484131|ref|ZP_07943061.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] gi|316924635|gb|EFV45791.1| branched-chain amino acid transport system/permease component [Bilophila wadsworthia 3_1_6] Length = 301 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 97/305 (31%), Gaps = 16/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + +G+Y L + L + + Sbjct: 8 LTNGLAVGGIYALIALGYTMVYGVLRLINFAHGDLFTLGSYLG--LTLLFSLGLQGKMSG 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + M MGL ++ + ++ + + + Sbjct: 66 ILVGGALIVMSMGLVAVVGYLLERVAYRPLRGSNRLAAVVSALGASIFFSNAIMLVYGAR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ V + + +G L + ++ T I A R + +Q Sbjct: 126 SQVYPNGILPSVAVSLLGVDIPLMRIVMFVGTVVLMLLLYWFINHTRIGTAIRAVAIDQD 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + A G AG +I+ DM FS + + I+GG+ Sbjct: 186 TAKLMGINVDNIISMIFLIGPALGGAAGVMMGLYYGQITYDM-GFSFGLKAFTAAIMGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + + + + F + L L+++ R Sbjct: 245 GNIPGAMVGGILLGVLEAMGAAYVSIAWKDAIAF-------------LVLILILIFRPTG 291 Query: 339 LLRLR 343 LL R Sbjct: 292 LLGER 296 >gi|28869612|ref|NP_792231.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28852854|gb|AAO55926.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 293 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+IV G +G++++ A+G+Y+ + + L+ +I Sbjct: 7 FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSVVFQRYFPELMGWYFII 66 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + + +L W + + Sbjct: 67 GIGVAFVVTFAFGFLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 124 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ S + + +++ ++A++ ++L R+ R + N+ + Sbjct: 125 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAAVFVFLYRSRWGLRIRAVTQNRAMAGA 184 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AG+ F + + + +V+ GG+ SL Sbjct: 185 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 242 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + +++ R + L Sbjct: 243 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 289 Query: 343 R 343 + Sbjct: 290 K 290 >gi|258654040|ref|YP_003203196.1| inner-membrane translocator [Nakamurella multipartita DSM 44233] gi|258557265|gb|ACV80207.1| inner-membrane translocator [Nakamurella multipartita DSM 44233] Length = 373 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 117/342 (34%), Gaps = 21/342 (6%) Query: 8 LNKYDKILCLLAVVYPLLLFL--------FLGATKSQKYIDSMGIQILIYVMFAWGLSIV 59 ++ ++ +AV+ L+ L + + L+ A ++ Sbjct: 26 WRRWLPVVIPVAVLALLIFLPWMRFSVPGVLPGVVNSPGSMQLLALCLVTAGIALSYDVM 85 Query: 60 VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 G GLLS + GAY I +G S+ L + + + A +++G +L+ +G Sbjct: 86 FGRTGLLSFGHALFVGTGAYLAAIALGTWGASLGLAVLIVLAGAIALPLVVGAIALRVKG 145 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179 A+ TL ++ + G +R S V+ Sbjct: 146 IAFAMVTLAFAQAVAITAARNPGGLTGGEEGLSLNRSALPAF------------LSGVVN 193 Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239 + Y++ LG L ++LWL +AW +R+N+ L + KL+A V+ Sbjct: 194 APYRYWLALGFLVLCVLVVLWLTTARTGHAWAAVRENEDRVEVLGMSAYRTKLTAVVVAG 253 Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 + G +P + + ++ +V+LGG S + + + Sbjct: 254 FLGTLGGFVQLIIVGGANPHLLSTELTLSLLIMVVLGGAGSRWGAVIGGVVYVLLDNRLQ 313 Query: 300 GMNFYYFNSLLKFDCSFNMRH-TTLMVIALFLVILMRSHSLL 340 ++ + L + ++ + LV+ L Sbjct: 314 ELSTSSTIADLPAVLRVPLSQPVFVLGLLFVLVVYFAPGGLA 355 >gi|18313087|ref|NP_559754.1| branched-chain amino acid transport permease protein [Pyrobaculum aerophilum str. IM2] gi|18160594|gb|AAL63936.1| branched-chain amino acid transport permease protein [Pyrobaculum aerophilum str. IM2] Length = 361 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 116/363 (31%), Gaps = 48/363 (13%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + +L ++ Y+ + + I IYV+ L++ G G+ + V Sbjct: 1 MRRYAGVLAYIASVLVVWATGRDVNSYMLTTAVDISIYVLITLSLNLEAGIAGIPNFGRV 60 Query: 72 IAYAIGAYSYV-------------------------------ILGSRYGLSIWLLIPVSA 100 + A GAY + L + + ++ Sbjct: 61 LTVAFGAYIAGGVLGRIALWALGLNYDYVADNPTAVSALSKTLTPPMAALLLLAGLFLAG 120 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++ A G+ P+ + DYLAI L ++ I + ++P+ G G+ Sbjct: 121 IVGAAIGVASSFPARRLTADYLAITLLAFGDVAYYIGLNYEPLVGGTLGVSAPP------ 174 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + V+ + V + + ++ L ++ R R++ + Sbjct: 175 -------IYEGIFGGGVMRAVGAALVSASVATATYALFTRLDKSPFGRILRVHREDPELV 227 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENIIVISIVILGGMT 279 L + A A+ A +AG +A + P F+ + I+++GGM Sbjct: 228 SMLGRDPAALRGWAMAIGGAASAVAGLLYALYVGAVHPRGFERINFTFYPWLIMVMGGMG 287 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S + + I I + ++ Y + L LVI+ + Sbjct: 288 SNRGVLEGVFIFIVI---YRLLDIYKYEVGNVVGFDPVWLGYILFGALAMLVIVTMPRGV 344 Query: 340 LRL 342 + Sbjct: 345 VPE 347 >gi|56420471|ref|YP_147789.1| ABC transporter permease [Geobacillus kaustophilus HTA426] gi|56380313|dbj|BAD76221.1| ABC transporter (permease) [Geobacillus kaustophilus HTA426] Length = 297 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 89/309 (28%), Gaps = 18/309 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I ++ A GL+I G +G++++ +GAY+ ++ + + + Sbjct: 6 LFNGLSVGSILLLIAIGLAITFGLMGVINMAHGELMMVGAYTTYVIQQWFTSHMPHSAGL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + L + + L+ I+ Sbjct: 66 YFVAAIPLSFLAAALLGWGLEKSLIRH---LYRRPLDSLLATWGISLILQQTARLIFGAP 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V ++ ++L + + + ++L +T + + N+ Sbjct: 123 NVAVVPPSWLDGGIRLFGAVFPYKRLFILCLVLAIVFFLYMYLMKTRAGRRIQAVTMNRS 182 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L +FA+ S G+AG + +VILGG+ Sbjct: 183 MAACLGIATQKVDAYSFAIGSGLAGVAGCALTLLGPI--GPTIGTYYIVDAFMVVILGGV 240 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L+ + + ++ + + + + Sbjct: 241 GKLAGTLLGAFGIGLISTFVEYSTSATIAK-------------VIVFVLIIAFLQWKPSG 287 Query: 339 LLRLRTPSN 347 LL +RT S Sbjct: 288 LLSVRTRSL 296 >gi|315426938|dbj|BAJ48557.1| branched-chain amino acid ABC transporter permease [Candidatus Caldiarchaeum subterraneum] gi|315426979|dbj|BAJ48597.1| branched-chain amino acid ABC transporter permease [Candidatus Caldiarchaeum subterraneum] Length = 375 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 98/253 (38%), Gaps = 20/253 (7%) Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + ++ ++A++ G I PS++ R DYLA+ L M E + I + + G G+ Sbjct: 125 LVAMVGLAAIVGAGLGFIASYPSIRLREDYLAMTLLAMGEFLRQIGYLDRTLVGGTLGVA 184 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 V D + + V+L + L + + + R Sbjct: 185 VPDP----------------YGWLGGLRPYAATLVMLTVAVLFFLYVRSVTYSPAGRVLR 228 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSENIIVI 270 +RD++ A L ++ K VSS +AGA +A S I+ + +F+ Sbjct: 229 AVRDSEMAAEVLGIDVVRVKQKILVVSSMMAAVAGALWAFNSVAVIANNYDRFTWTFWPW 288 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +VI+GG + + T + + + + N+ S L IAL + Sbjct: 289 VMVIIGGAGNNRGVLLGTLVFVILRQAILTYNYLLEPF---IPFSIVWLDRLLFGIALII 345 Query: 331 VILMRSHSLLRLR 343 V+++R ++ + Sbjct: 346 VLIIRPQGIVPEK 358 >gi|296535253|ref|ZP_06897463.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter [Roseomonas cervicalis ATCC 49957] gi|296264420|gb|EFH10835.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter [Roseomonas cervicalis ATCC 49957] Length = 626 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 121/318 (38%), Gaps = 18/318 (5%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + + A++ L LG Y + + V+FA L +++G G+ S Sbjct: 312 FLSVTLRRALLALAAAALLLGPLLLGDYPLILLADFAVLVLFAASLQLIMGPGGMASFGH 371 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + GAY+ + + + L + ++ +G G+ G + G Y A+ TL + Sbjct: 372 AAFFGAGAYAAALAMKYWAAPMLLGLSLAPFAAGLAGLGFGWFFARLSGVYAAMLTLAFA 431 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 +I +I +W +T G GI +P+ + + +Y+ L + Sbjct: 432 QILWSIAFQWVEVTGGDNGILGV------------------WPAGWARGRLEFWYLALAL 473 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 C ++ A R RD+ ++ + +AF +++ + G+AGA FA Sbjct: 474 CGGGVWLLRRAVHAPFGLALRGQRDSALRAEAIGLDTFRLRWAAFTLAAFWAGLAGAVFA 533 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + P ++ + +V+LGG+ SL+ G+ E + + L Sbjct: 534 YGKGSVFPSFLAIGRSVDGLLMVLLGGVHSLAGPLLGAVAFAGLQEQLARVTSLWRLLLG 593 Query: 311 KFDCSFNMRHTTLMVIAL 328 + + + AL Sbjct: 594 LTILALVLFFPQGLGGAL 611 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 87/302 (28%), Gaps = 19/302 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + + A GL+++ G +++ Y +GAY L + W Sbjct: 9 LNGLASASSLFLVASGLTLIFGVSRIVNFAHGSLYMLGAYLGWTLLQLPSVDDW---GWR 65 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + + + + + + +L + + + + + Sbjct: 66 GFALAVLLAALLAGGIGALLEITVLRRIYRAPELFQLLATFALVLVVQDLVLLLWGPDDK 125 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + + +++ + + L L RT R ++ Sbjct: 126 FGPRAPVPLRGAIDLLGLRFPRYELFLIALGPVVLGLLWLLLHRTRFGILLRAATQDRDM 185 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L F + +A G+ GA + +V+LGG+ Sbjct: 186 VAALGVDQRLLFTGVFFLGAALAGLGGALQLPREAVTPHMDMAII--VEAFVVVVLGGLG 243 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ A ++ + F L+ + + +V+++R + L Sbjct: 244 SIPGAFLAALLIGELHAFGI--------------LVFPRITLVLVFLVMAVVLVLRPNGL 289 Query: 340 LR 341 L Sbjct: 290 LG 291 >gi|226944075|ref|YP_002799148.1| high affinity branched chain amino acid ABC transporter permease [Azotobacter vinelandii DJ] gi|226719002|gb|ACO78173.1| high affinity branched chain amino acid ABC transporter, permease component [Azotobacter vinelandii DJ] Length = 307 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 95/306 (31%), Gaps = 17/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW--LLI 96 + + Y + A G ++V G +G+++ Y I +Y I+ + + L + Sbjct: 11 LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIASYVAFIVIAGLSMLGLDQLPL 70 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + + + R Y + + + + N + + R Sbjct: 71 LMAGAFAASIVVASAYGYSIERIAYRPLRGGNRLIPLISAIGMSIFLQN-EVLLSQGSRD 129 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + + V+ + + + L++ R+ + A R ++ Sbjct: 130 KAIPSLLPGNLVIGESAMHGVVISWIQMLIFAVTLLVMLGLHLFISRSRLGRACRACAED 189 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 K L F + +A +A I+P F I + +LG Sbjct: 190 LKMAGLLGIDTHRIIALTFVIGAALAAVAAVLLGLQYGVINPQQ-GFLAGIKAFTAAVLG 248 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ +L + + ++ F L LV+L R Sbjct: 249 GIGSIPGAMLGGLLLGVAEAFGADLFGDPYKDVVAFG-------------LLILVLLFRP 295 Query: 337 HSLLRL 342 +L Sbjct: 296 TGILGR 301 >gi|326789583|ref|YP_004307404.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM 5427] gi|326540347|gb|ADZ82206.1| ABC-type transporter, integral membrane subunit [Clostridium lentocellum DSM 5427] Length = 299 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 30/305 (9%), Positives = 87/305 (28%), Gaps = 20/305 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + ++ + A G ++V G L L++ + + Y S + + ++ + Sbjct: 10 LVNGLTLGSLFALVAIGYTMVYGILRLINFAHGDIFMMAMYIAFFSISIFSVPWYISFIL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ G+ + K + A + ++ + T G Sbjct: 70 VIALTALLGIATEKVAYKPLREQGAPSISLLISSIGASYLMENLATVLFTGRPKNFPQIP 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + + + V + L +++ + T A R + + + Sbjct: 130 FFTDM--------ITVGGIHIQRLAIMVPIITLVLLLALLYLINHTKTGMAMRAVSKDVE 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + ++ + F + SA + + +I + ++GG+ Sbjct: 182 TARLMGISVNKVITATFGIGSALAAVGAIMWGMKYLQI-KPDVGVMPGMKCFIAAVIGGI 240 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + L F + + R + Sbjct: 241 GNIKGAVVGGLLLGLIEVLIVAFIPSLTGYRDAFSFILLIIILLV-----------RPNG 289 Query: 339 LLRLR 343 L+ + Sbjct: 290 LIGEK 294 >gi|288573620|ref|ZP_06391977.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569361|gb|EFC90918.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM 11002] Length = 293 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 84/303 (27%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G S+V L + IG Y + G +IW+ Sbjct: 8 IINGLSLGSIYALIAVGYSLVYSILMFSNFAHGGFLIIGGYLCYFALNSAGFNIWVAGFG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +G + + K + ++ ++ ++ G + A Sbjct: 68 ALIGAGFAAVATERLTYKPIRERTSVTLYLLIASMGMNIVIENIFVIVAGGRFRALPPVI 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T V L+ + L+L +T A R + + Sbjct: 128 PTTPV--------HLFGNATTSALDLISLVTAFVFLGGLQLFLTKTKWGLAIRAAACDLR 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F V+ + G F + + I ++GG+ Sbjct: 180 VAGLMGVNTSKLISIVFFVAGLLAAVGGIFLSVRY---TLYPQLGMITIKAFVAAVIGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + IL L G + ++ L + +++R Sbjct: 237 GSLPGAVVGSLILGLSEMLTAGFLS-------------SQLRDLVVFSLLVITLIVRPTG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|170743532|ref|YP_001772187.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168197806|gb|ACA19753.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 306 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 98/313 (31%), Gaps = 29/313 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + + A+ + V+ Sbjct: 8 LINGLTLGSIYGLIAIGYTMVFGIIGMINFAHGDVFMLSAFIALIAFLLLTTVLGIGSVV 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 +++ L++ V+ ++ G + + + +A LI + L + + G Sbjct: 68 VALILVMIVAMALTALWGWAIERIAYQPLRGSFRLAPLISAIGVSIFLSNFVQVVQGARN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 L + V ++ L A ++ T++ A Sbjct: 128 KPTPPMLRDVIVLWTGE------NGYAVALSYKQILIMAVTAILLAGFWYLVQHTSLGRA 181 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++K L + F + +A +AG + +S F + Sbjct: 182 QRACEQDRKMASLLGIDVDRTISLTFVLGAALAAVAGTMYLLYYGVLSF-SDGFVPGVKA 240 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL I+ + + + F L Sbjct: 241 FTAAVLGGIGSLPGAVLGGLIIGLIETFWSAYFSIEYKDVAAFS-------------ILA 287 Query: 330 LVILMRSHSLLRL 342 +V++ +L Sbjct: 288 IVLIFMPSGILGR 300 >gi|162453856|ref|YP_001616223.1| putative branched-chain amino acid ABC transporter, permease protein [Sorangium cellulosum 'So ce 56'] gi|161164438|emb|CAN95743.1| putative branched-chain amino acid ABC transporter, permease protein [Sorangium cellulosum 'So ce 56'] Length = 298 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 85/292 (29%), Gaps = 16/292 (5%) Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113 GL+ G + ++++ GAY+ ++G + + + Sbjct: 23 MGLAFSFGLMNVINMAHGEFIMAGAYTTYVIGHHVAPLVGGTEAGLWFLLALPASFLVAG 82 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L + L I + +L W + + + S + Sbjct: 83 VLGLVLE-LTIVRFLYGRPLDTLLATWGVGLVLQQAARSLFGASNVQVSSPSWLSGGVAL 141 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 S V +++ + A++ +L R+A R + N++ L + Sbjct: 142 SGGVQLPYKRVFLIALVIACIAAVYTYLHRSAGGRRLRAVMQNREMASCLGVRARRVDAA 201 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 FA+ + G+AG + + +VILGG+ L A ++ Sbjct: 202 TFALGAGLAGIAGCALTQLGSI--GPSLGTNYIVDAFMVVILGGLGRLPGTVVAALVIGV 259 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L L+ + + R LL LRT Sbjct: 260 ANTLLELSTTASLGKA-------------LVFALVIAFLQWRPTGLLALRTR 298 >gi|117617983|ref|YP_854642.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559390|gb|ABK36338.1| high-affinity branched-chain amino acid transport system permeaseprotein LivH [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 308 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y ++ + + + Sbjct: 12 LLNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMVMAGLMMMGIDSTFL 71 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + +++ I I + R Sbjct: 72 LLGGAFLVSIVITGTYGWTIERVAYRPLRGGNRLIPLISAIGMSIFLQNMMRMAQGSRDI 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + T + + + ++ ++ R+ + A R ++ Sbjct: 132 AMPTLISGGWTLGEADGFQASLSWMQLIIFVVTFITMLALTQFIGRSRMGRACRACSEDI 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + + +AG I+P F + + +LGG Sbjct: 192 KMANLLGIDTHVVISITFVLGATLAAVAGVLLGMYYGVINPY-LGFMAGLKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L V L G + ++ F L V+L Sbjct: 251 IGSIPGAVLGGLLLGVVEALTAGYLSTEYKDVMAF-------------ALLIGVLLFMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|257388571|ref|YP_003178344.1| inner-membrane translocator [Halomicrobium mukohataei DSM 12286] gi|257170878|gb|ACV48637.1| inner-membrane translocator [Halomicrobium mukohataei DSM 12286] Length = 345 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 103/343 (30%), Gaps = 26/343 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 LL V + L F+ + + + IYVM A GL+++ G LG+L+ Sbjct: 11 VLLQVGFVDGLAEFVRPGTFAEVVLRGLSKAAIYVMIAAGLTLIFGLLGVLNFAHGALTM 70 Query: 76 IGAYSYVILGS--------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 IGAY ++ + +++ ++ + + + G+ + + P Y Sbjct: 71 IGAYLGGLVMVLTVAQGTGPWARLALFFVAMAVVFGLLSALGGSIEVSLIRPLYDRPPIY 130 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + T ++ + + + + V Sbjct: 131 QILLTFGVTLVLEELARIVVGFYG-----LQPLAEWQAALGTIPAFLETSQSLGPVSVRG 185 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + + A+I +L RT R ++ + +L + FA+ + Sbjct: 186 LALFEIFLGALTVAAIWGFLTRTRYGLFIRAGSEDSEMAEALGIDVRRVFTVVFALGAGV 245 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301 G+AG + + +VI+GG+ + I+ V Sbjct: 246 AGVAGTLLMWDPVWGASVPLAAESLLPAFVVVIIGGLGTFRGTVVGGLIVGLVDATTTWW 305 Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + L + +++R + + Sbjct: 306 FQNVVVEWTWLPE-------VAIFMILVVALIVRPQGIYGVEE 341 >gi|94984841|ref|YP_604205.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300] gi|94555122|gb|ABF45036.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Deinococcus geothermalis DSM 11300] Length = 324 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 103/328 (31%), Gaps = 39/328 (11%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS----- 91 + + + +Y +FA G ++V LG+++ + +GAY L + Sbjct: 8 QNVLNGLAIGSVYAIFALGYTLVFSILGIINFAHGAVFTLGAYFTYTLVVGQFENNGLLK 67 Query: 92 -----------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 L + AM++G +++ + + A L + Sbjct: 68 GINLFPNGSPLSGNPAVFALATLIGAMVAGLVAVLIERLAFRPMRSRGAEPLLALVSSLG 127 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 L+ I G +L VI + + Sbjct: 128 VALVIVNLIQLLVGAEIYNFPADAYGQVQPALSFHIGDRV--VIVRTVQLIIFAVSLVML 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + + RT + A R + +N L ++ L F +S G+AG + Sbjct: 186 AVLGYVIGRTKVGKALRAVAENPGTASLLGISVDRFILITFFLSGFLGGLAGTLVGTAFG 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++ F + + +++++LGG+ S+ ++ Sbjct: 246 -VAGPYFGVTYGLKGLAVIVLGGLGSIPGAVVGGLVIGLAEAFV--------------PA 290 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 ++ + LF+++L+R LL Sbjct: 291 QYSAYKDAVAFALLFVILLVRPQGLLGR 318 >gi|293606936|ref|ZP_06689283.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292814668|gb|EFF73802.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 288 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 103/303 (33%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + Y + + GL+++ G + +++ IG Y ++ +++G+ ++ + Sbjct: 8 VINGLLLGGAYTIISLGLTLIFGVVRVVNFAHGEFLMIGMYLVYLIAAQFGVHPYIGLVP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+I A G + ++ + + + IL+ + G L Sbjct: 68 VAVILFALGALTQKGIIQPLLNADQHIQIFATVGVSTILLNLALVIFGANVYRAPVELGT 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + +F + L+ + L++ RT + A R + ++ Sbjct: 128 NAIDVGNYSMVTGQVITF-----------VVGIGLAVLLHLFMHRTYLGRALRAVAQHRY 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + AF + +AF+G+A A F IV+LGG+ Sbjct: 177 AATLMGVNVNNVYAIAFGLGTAFVGIAAGLLAPQYPVFPTVGTYFVLT--AFVIVVLGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + I+ V L + L++++R + Sbjct: 235 GSLYGAVAGSMIIGIVDTLAGYYI-------------APDLKEVVYFGIFLLILVLRPNG 281 Query: 339 LLR 341 L Sbjct: 282 LFG 284 >gi|148256163|ref|YP_001240748.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146408336|gb|ABQ36842.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 348 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 116/330 (35%), Gaps = 28/330 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L L + + ++ + LI A L + G G++SL + Y Sbjct: 23 AVAALLLIMPLIANGFFLIEIFGTTLILGTIALSLMFLAGYGGMVSLMQLTIAGFAGYMV 82 Query: 82 VILGSRYG------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + G WL P + +++ G + G +++ G Y + TL + F Sbjct: 83 AVFGVSGNANISLGWPWWLATPTALVLAVLFGTLGGALAVRTEGIYTIMITLAIGAAFYY 142 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + I NG GI +F+G RS I YY+ L + Sbjct: 143 FTNQNWAIFNGHTGINTIATPHFIGIDWRSD--------------IAFYYLTLAVAVACY 188 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++L+L R A + +RDN + +L + +++A+A ++ G+ G + + Sbjct: 189 GVVLYLSRAPFGLALQGVRDNPRRMAALGFNVNAHRIAAYAFAALIAGLGGVLQVWNYRQ 248 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ISP I ++ + ++GG+T I + + +F Sbjct: 249 ISPGSVAVERCIDILIVAVVGGVTRPVGAYIGAFIFVMLRTFALDFLVKVGLDGNRFR-- 306 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L+ + ++ S ++ L Sbjct: 307 ------LLIGLGFLAIVFWSSDGVIGLYER 330 >gi|261856190|ref|YP_003263473.1| urea ABC transporter permease [Halothiobacillus neapolitanus c2] gi|261836659|gb|ACX96426.1| urea ABC transporter, permease protein UrtB [Halothiobacillus neapolitanus c2] Length = 308 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 98/301 (32%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ A GL+I+ G +G++++ IGAYS ++ + ++ Sbjct: 22 LSLFSVLLLMALGLAIIFGQMGVINMAHGEFMTIGAYSIYVISKITEQYFPGFMAYYFVV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++ F + + +L W + + T Sbjct: 82 AIIAAFVIAFTVGYFVE--FLLIRHLYRRPLDTLLATWGLSLIMQQIFRSVFGGREVSPT 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + I +V+L ++A +IL L ++ R N+ + Sbjct: 140 LPDWLMGSWAPTPNIDIPINGLFVMLITLVVTAIVILALYKSRWGLKVRATTQNRMMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + FAV G+AGA F + + + +V+ GG SL Sbjct: 200 VGINTQKVDRMTFAVGCGVAGIAGAAFTTIAS--TGPTSGSTYIVDTFLVVVFGGAASLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + N + ++A+ +++++R L Sbjct: 258 GTVASAFTISQAQSILTFFM-------------TNAMGKVVTLLAIIVILMLRPEGLFSS 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|222082765|ref|YP_002542130.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727444|gb|ACM30533.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 335 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 106/290 (36%), Gaps = 13/290 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + ++L L ++ +++ + L +V G G+ +L + GAY Sbjct: 25 IAIAVILVLAAAGYLLFPDNLALLTRLIAIALLVLSLDLVTGYCGVATLGHAALFGAGAY 84 Query: 80 SYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + I + Y L+ V + G+I G+ L+ G + ++ + +F Sbjct: 85 AAGIASAHYGINDPLLMTLVGIVAGAVAGLICGIVILRAHGLPQLVLSIALIYLFHEFAN 144 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K T G G+ G F +Y Y + + ++ ++ Sbjct: 145 KVSSWTGGSDGLSGISTDPLFGL------------FEFDLYGHTAYVYGVALLLVTLVLL 192 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ R IR + ++ + + + +S A G+ GA A S + Sbjct: 193 RILVRSPFGMLCRGIRQDPLRIRAMGVSPKVTLIKMYVISGAVAGVGGALNAISTQVVGL 252 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 D F+++ + +++LGG SL T + + + N +++ + Sbjct: 253 DSLSFTQSAEALVMLVLGGTGSLFGALAGTLVFMLFEDYVSAANPFHWLT 302 >gi|134294219|ref|YP_001117954.1| inner-membrane translocator [Burkholderia vietnamiensis G4] gi|134137376|gb|ABO53119.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia vietnamiensis G4] Length = 313 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 22 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 81 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W ++ ++ +I GA G+ + L++ + L+++ ++ G Sbjct: 82 YFGLPYWAMLVLAPLIVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 141 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 142 SSGQPYDVPAQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 191 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 192 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 249 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 250 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 295 Query: 327 ALFLVILMRSHSLLR 341 + +V+L R L Sbjct: 296 IMAIVLLFRPAGLFG 310 >gi|332529317|ref|ZP_08405279.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332041234|gb|EGI77598.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 328 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 108/328 (32%), Gaps = 18/328 (5%) Query: 13 KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72 K L L+ V+ L + + LI + A GL++V G + +L+ + Sbjct: 10 KPLALVPVLALFALPAIGSPSTWLTLTVAGLAMGLIIFIIASGLTLVFGLMDVLNFGHGV 69 Query: 73 AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI--ATLIMS 130 A+GA+ V + G + +++ M++ + G + Sbjct: 70 FIALGAFVAVSVLGGMGSYVQAGSLWLNLLALLPAMLVAMAVAGALGWAFERLIVRPVYG 129 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + + ILI + G+ I V + + + E F +L Sbjct: 130 QHLKQILITMGGMIIGEELIKVIWGPQQIALPLPPALSGV-LYLGDAAVEKFRLLCVLVG 188 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + ++ L RT I R +++ SL I + F SA G+ G + Sbjct: 189 LAVFTALAWTLNRTKIGLLIRAGVQDREMVESLGYRIQRLFIGVFVAGSALAGLGGVMWG 248 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + ++P M N+++ ++I+GG+ S ++ + + Sbjct: 249 LYQQSVTPQM-GAQVNVLIFIVIIIGGLGSTLGALIGALLVGLMANYTGFL--------- 298 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + ++L R Sbjct: 299 -----VPKVALFSNIALMVAILLWRPQG 321 >gi|72382884|ref|YP_292239.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus str. NATL2A] gi|72002734|gb|AAZ58536.1| urea ABC transporter membrane protein [Prochlorococcus marinus str. NATL2A] Length = 371 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 91/324 (28%), Gaps = 37/324 (11%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-------- 89 + ++ + L + A G+ ++ G G+LSL I +A+G Y + Sbjct: 29 FRLNLLGRYLSLAIVALGVDLIWGFTGMLSLGQGIFFALGGYCAAMFLQLNSSGEFPNGI 88 Query: 90 ------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 W S + ++ + + + Sbjct: 89 PEFFGLYGVEKLPFFWEPFKSSIFTLISIWLLPAIIAGLLGYLVFRNRIKGVYFSILTQA 148 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + L T V + F I + + +++ + L+ Sbjct: 149 ALLVFFNFFNGQQKLINGTNGLKTDVT---QLFGQMVGSEIMQRWFFWISAILVILAWFF 205 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 W+ R N IRD++ + K F+++ G++GA + +S Sbjct: 206 ARWIVRDRFGNILIGIRDDEARVRFTGYNPVIFKTIIFSIAGGLAGISGALYTVQSGIVS 265 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P +I ++ V +GG +L + L + Sbjct: 266 PQFMTVPFSIEMVVWVAVGGRGTLLGAILGAVFINYAKSLVSE--------------ALP 311 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + LV+ +L Sbjct: 312 ASWMFIQGGLFILVVTALPEGVLG 335 >gi|256828799|ref|YP_003157527.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256577975|gb|ACU89111.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 293 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 98/313 (31%), Gaps = 26/313 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + +Y+ + Y + A G +I+ + G+++ +G V G Sbjct: 3 PSSLLQYLITGLTLGSTYGLTALGFTIIFNTTGVINFAQGEFVMLGGMMSVYFMHSLGFG 62 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + ++ + + G ++ +++ D AI +I++ ++ + GK Sbjct: 63 EPAAVVLAVLGATMVGALVERLAIRPVRDCPAINLIIITIGVSILIRGLAMLLWGKDTHV 122 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + +VL FL ++ L+ T A Sbjct: 123 LEPFSGNQPIMFLG-----------AAIMPQAIWVLTISLFLLGALKLFFSGTIHGKAML 171 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 + KA + + L +F +S+ + G A + + + Sbjct: 172 ACSYDTKAASLVGIGVQRMVLFSFMISALVGAVGGVILAPITM--TSYDVGIMLGLKGFA 229 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 ILGG+ + A IL + L G + L F + L ++ Sbjct: 230 ACILGGLGNPFGAAAGGVILGVLESLGAGFVSSAYKDALAF-------------VILLIL 276 Query: 332 ILMRSHSLLRLRT 344 + ++ L L+ Sbjct: 277 LFVKPSGLFGLKD 289 >gi|213971246|ref|ZP_03399363.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|213923999|gb|EEB57577.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 293 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+IV G +G++++ A+G+Y+ + + L+ +I Sbjct: 7 FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSVVFQRYFPELMGWYFII 66 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + + +L W + + Sbjct: 67 GIGVAFLVTFAFGFLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 124 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ S + + +++ ++A++ ++L R+ R + N+ + Sbjct: 125 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAAVFVFLYRSRWGLRIRAVTQNRAMAGA 184 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AG+ F + + + +V+ GG+ SL Sbjct: 185 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 242 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + +++ R + L Sbjct: 243 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 289 Query: 343 R 343 + Sbjct: 290 K 290 >gi|257486111|ref|ZP_05640152.1| inner-membrane translocator [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330989352|gb|EGH87455.1| inner-membrane translocator [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010450|gb|EGH90506.1| inner-membrane translocator [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 300 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 92/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+IV G +G++++ A+G+Y + + L+ +I Sbjct: 14 FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYMTYVTSVVFQRYFPELMGWYFII 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + + +L W + + Sbjct: 74 GIGMAFVVTFAFGLLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ S + + +++ ++A++ L+L R+ R + N+ + Sbjct: 132 TVQWLQGAWKISDGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AG+ F + + + +V+ GG+ SL Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + +++ R + L Sbjct: 250 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296 Query: 343 R 343 + Sbjct: 297 K 297 >gi|147678685|ref|YP_001212900.1| branched-chain amino acid ABC-type transport system, permease components [Pelotomaculum thermopropionicum SI] gi|146274782|dbj|BAF60531.1| branched-chain amino acid ABC-type transport system, permease components [Pelotomaculum thermopropionicum SI] Length = 293 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 110/305 (36%), Gaps = 26/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G L ++++ + IGA+ ++L + +W + Sbjct: 6 VVNGLTAGATYALVAAGYTLVFGVLEIINMAHAEIFMIGAFIGLLLVTGTCCPVWAAVAG 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + +G G + + + +A LI + L+ G + + Sbjct: 66 AMIGAGLLGWALERLALRPLRKQGVSHLAPLISTIGVSIFLMSLAMKIFGPQSVRFPASV 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + V + +L L A++ + L RT + A R + +N Sbjct: 126 EPRFFNL----------FGTVNISLLQIVILGISLALVAALKVLLARTRLGKALRAVAEN 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +A + + +A ++SA G AG + +SP M + + ++I+I+G Sbjct: 176 PEAAGLMGVNVNSVMAAAVVMASALGGAAGVLVGLQFNAVSPTM-GIAYGLKGLAIIIVG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM S++ +L L + + F I L V+L++ Sbjct: 235 GMGSVAGAVAGGLLLGAAEVLAIAYIGSSYRDAVAF-------------IILIAVLLIKP 281 Query: 337 HSLLR 341 + Sbjct: 282 SGIFG 286 >gi|15600900|ref|NP_232530.1| ribose ABC transporter permease protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|9657517|gb|AAF96043.1| ribose ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] Length = 332 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 32/312 (10%), Positives = 97/312 (31%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 35 LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + ++ + + + +P + + A G I G+ K + + M+ Sbjct: 94 LCG-AFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMT----- 147 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G +Y R G T + + + + ++ +++ Sbjct: 148 -------LLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWY 200 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + T + N+ A + K+ +A+ +AG + Sbjct: 201 LL----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 317 AKAVVILLAVLV 328 >gi|83953673|ref|ZP_00962394.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83841618|gb|EAP80787.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] Length = 336 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 82/309 (26%), Gaps = 19/309 (6%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG---------LSIWLLIPVS 99 + A G+++V G L + A+GA S V++ + + L +P + Sbjct: 25 LALGALGVTLVYGILRFSNFAHGDTMALGAMSAVLITWGFQSLGLSLGVLPTALLALPFA 84 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +I+ + F + A + + + Sbjct: 85 IIITIGLLLGTDKLVYSFYREKKAKPVIFVIVSLGVTFVYNGITRFIIGAEDQRFLDGER 144 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + ++ + A + +L +T + R DN+ Sbjct: 145 FIISARDFKEMTGLEEGLAIKTTQGLTVVTAVIVVAVLFWFLNKTRSGKSMRAYSDNEDL 204 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + + + AG + + F + + + I+GG+ Sbjct: 205 ALLSGINPERVVMITWIIVACLATTAGVLYGLDKSF--KPFTYFQLLLPIFAAAIVGGLG 262 Query: 280 SLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 S ++ + + + + L +V Sbjct: 263 SPIGAIAGGFVIAFSEVTITYAWKKVFGYLAPEGMAPDGLVQLLSTDYKFAVSFVILLIV 322 Query: 332 ILMRSHSLL 340 +L + L Sbjct: 323 LLFKPTGLF 331 >gi|83942454|ref|ZP_00954915.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] gi|83846547|gb|EAP84423.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] Length = 336 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 83/309 (26%), Gaps = 19/309 (6%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG---------LSIWLLIPVS 99 + A G+++V G L + A+GA S V++ + + L +P + Sbjct: 25 LALGALGVTLVYGILRFSNFAHGDTMALGAMSAVLITWGFQSLGLSLGVLPTALLALPFA 84 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +I+ + F + A + + + Sbjct: 85 IIITIGLLLGTDKLVYSFYREKKAKPVIFVIVSLGVTFVYNGITRFIIGAEDQRFLDGER 144 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + ++ + A++ +L +T + R DN+ Sbjct: 145 FIISARDFKEMTGLEEGLAIKTTQGLTVVTAVIVVAALFWFLNKTRSGKSMRAYSDNEDL 204 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + + + AG + + F + + + I+GG+ Sbjct: 205 ALLSGINPERVVMITWIIVACLATTAGVLYGLDKSF--KPFTYFQLLLPIFAAAIVGGLG 262 Query: 280 SLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 S ++ + + + + L +V Sbjct: 263 SPIGAIAGGFVIAFSEVTITYAWKKVFGYLAPEGMAPDGLVQLLSTDYKFAVSFVILLIV 322 Query: 332 ILMRSHSLL 340 +L + L Sbjct: 323 LLFKPTGLF 331 >gi|301060571|ref|ZP_07201410.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] gi|300445355|gb|EFK09281.1| amino acid or sugar ABC transport system, permease protein [delta proteobacterium NaphS2] Length = 340 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 120/331 (36%), Gaps = 37/331 (11%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + +I L+A LL+ L + + + IY + A + G++SL Sbjct: 32 WREISYLMAPRTFLLMGLLVLPVFLPEVWQRVFCLAGIYSLLAIAFDFLFSYAGMVSLGG 91 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 + +G Y+ ILGS +GL +P+ + G ++ LP+L+ +G Y AIAT I Sbjct: 92 ALWMGVGGYTVGILGSEFGLPPVFSLPIGTFLGGGICTVLLLPTLRLKGIYFAIATFIYP 151 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 I +I+ + I G G+ + + YV+ + Sbjct: 152 FIISHIIEALQ-IAGGTFGLADLPVIENGW---------------------VVLYVMAVL 189 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 I L + +R++ +N +A + +I + A ++S +AG + + Sbjct: 190 LTGIFFGIRRLVIEDVGMVFRSMMENDQAVSASGISITVLRTIAVYIASCIGCLAGGYLS 249 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + F +I+ I+ ++GG + + IL+ + E Sbjct: 250 VLYGWVGMSFFALDFSILPIAASVIGGPGTFAGSLLGAFILVPLTEFLRPFGP------- 302 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L L ++++ + Sbjct: 303 --------MRMVGYSVILALFVVLKPEGIFP 325 >gi|317494578|ref|ZP_07952991.1| branched-chain amino acid transport system/permease [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917508|gb|EFV38854.1| branched-chain amino acid transport system/permease [Enterobacteriaceae bacterium 9_2_54FAA] Length = 308 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMLGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LIGAAFIVAIVITSAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L V + + ++ L++R + + A R ++ Sbjct: 132 ALPRLVTGQWTLGESNGFSASISTMQIIIWVVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L + F + +A +AG I+P F + + +LGG Sbjct: 192 KMASLLGISTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|317404153|gb|EFV84599.1| branched-chain amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 288 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 102/303 (33%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + Y + + GL+++ G + +++ IG Y+ ++ +++G+ ++ + Sbjct: 8 VINGLLLGGAYTIISLGLTLIFGVVRVVNFAHGEFLMIGMYAVYLIAAQFGVHPYIGLVP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+I A G + ++ + + + IL+ + G +L Sbjct: 68 VAVILFALGALTQKGIIQPLLNADQHIQIFATVGVSTILLNLALVIFGANVFRAPVQLGT 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + + L+ + L++ RT + A R + ++ Sbjct: 128 STLDVGNYSMVTG-----------QLVTFVVGLSLAVLLHLFMHRTYLGRALRAVAQHRY 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + AF + +AF+G+A A F IV+LGG+ Sbjct: 177 AATLMGVNVNNVYAIAFGLGTAFVGIAAGLLAPQYPVFPTVGTYFVLT--AFVIVVLGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + I+ V L + L++++R Sbjct: 235 GSLYGAVAGSMIIGIVDTLAGYYI-------------APDLKEVVYFGIFLLILVLRPTG 281 Query: 339 LLR 341 L Sbjct: 282 LFG 284 >gi|150016637|ref|YP_001308891.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] gi|149903102|gb|ABR33935.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052] Length = 300 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 94/305 (30%), Gaps = 22/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + + +Y + A G ++V G L L++ + + AY + +GL + Sbjct: 11 QNLANGISLGSLYALIAIGYTMVYGILKLINFAHGDIFMMAAYFGFFGVATFGLPWYFAF 70 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ +I+ GM + + + + I+ LI + +L + G Sbjct: 71 IIAVVITAFLGMGIEFTAYRPLRNAPKISALISAIGVSFLLENLAVVLFGG--------- 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + + + + + ++ + T I A R + Sbjct: 122 -RPKAFPDVKLFTDVIVIGGISIQRLTFIIPVVTIVILFVLLHLVNNTNIGMAMRAASKD 180 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + + FA+ S + + +I M + ++G Sbjct: 181 VETARLMGINVNKTISFTFAIGSGLAAVGSMMWCVKYPQIVALM-GMMPGLKCFIAAVIG 239 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ + IL + + F L I L +++L + Sbjct: 240 GIGDIKGAVIGGFILGLAEIML-----------IGFFPGLTGYRDALAFILLIVILLFKP 288 Query: 337 HSLLR 341 ++ Sbjct: 289 TGIMG 293 >gi|15889683|ref|NP_355364.1| ABC transporter, membrane spanning protein (urea/amide) [Agrobacterium tumefaciens str. C58] gi|15157589|gb|AAK88149.1| ABC transporter, membrane spanning protein (urea/amide) [Agrobacterium tumefaciens str. C58] Length = 392 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 99/337 (29%), Gaps = 33/337 (9%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 LL A + YI SM + L Y + A L +V G G+LSL +A+G Y+ + Sbjct: 33 LLLPEGSAFRIPTYIMSMLGKYLAYALLALALDLVWGYCGILSLGHAAFFALGGYAMGMY 92 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 R + + LP D A L++ + + + Sbjct: 93 LMRQIGTRGVYGHPVLPDFMVFLNWKELPWFWHGFDMFWFAALMVLVVPGLLAFVFGWFA 152 Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + D + + F ++ Sbjct: 153 FRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFSVQADGTRAMLFA 212 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + M LS I + + +RD + L + KL F VS+ G+A Sbjct: 213 MTAAMLALSLLIASGIVNSKFGKVLVGVRDAESRVRFLGFRVENIKLFTFVVSAMMAGVA 272 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA F I+P F + +I V+ +GG +L ++ G G Sbjct: 273 GALFVPQVGIINPGEFSPANSIEVVVWTAVGGRGTLIGPIIGALLVNGGKSYFTG----- 327 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +F + V L ++ Sbjct: 328 ---------AFPEFWLFALGGLFIAVTLFFPKGIVGT 355 >gi|154483824|ref|ZP_02026272.1| hypothetical protein EUBVEN_01528 [Eubacterium ventriosum ATCC 27560] gi|149735315|gb|EDM51201.1| hypothetical protein EUBVEN_01528 [Eubacterium ventriosum ATCC 27560] Length = 550 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 31/318 (9%), Positives = 85/318 (26%), Gaps = 9/318 (2%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y I+ + + + + + I ++ Q + A G++ ++ G L+ Sbjct: 227 YIVIVLIFIGLCAVTPIVKNTQLLTYTNILNILQQASPRMFLALGVAGLILLTG-TDLSV 285 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G + I+ + + + G + L +++ Sbjct: 286 GRMVGMGMVASTIIMHNGINTG--GVFGHIFDFSSMGPVNRAILALVVCIVLTTFFAMIA 343 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F I+ + + + + V P+ F+ ++L Sbjct: 344 GFFMARFKMHPFISTMANMLIIFGLVTYATKGVSFGAIDQAIPNIFIPQIGGFPTIILWA 403 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 A + +T + N +A ++ + AF ++ G Sbjct: 404 LVAIAIVWFIWNKTTFGKNLFAVGGNPEAAAVSGISVFKVTMGAFILAGILYGFGSWLEC 463 Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304 + ++ I+ ++ GG+ +S + I + + Sbjct: 464 NRMIGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVLIFTSLTYSLTILGID 523 Query: 305 YFNSLLKFDCSFNMRHTT 322 + T Sbjct: 524 TNLQFIFEGIIILAAVTL 541 >gi|110834845|ref|YP_693704.1| branched-chain amino acid ABC transporter permease [Alcanivorax borkumensis SK2] gi|110647956|emb|CAL17432.1| branched-chain amino acid ABC transporter,permease protein [Alcanivorax borkumensis SK2] Length = 308 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 92/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I+V+ A GL+I+ G +G++++ +GAY+ + + + L + Sbjct: 22 LSLFSIFVLMALGLAIIFGQMGVINMAHGEFMILGAYTTYLTAQLFENYLPGLYEGYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + + +L W + +G + Sbjct: 82 AMILAFFVTAALGALVEW--LMIRHLYHRPLDTLLATWGLSLILQQTYRSVFGAREVGVS 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + V I +V++ ++ + L + R+ R + N+ + Sbjct: 140 LPDWMMGSIAVTDLVEIPINGIFVMVLALVIAFGVYLLMFRSGWGRQVRAVVQNRPMSEA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + FA+ G+AG+ F + + +V+ GG SL Sbjct: 200 VGIDSSKVDRVTFALGCGIAGVAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAQSLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++ + ++++R L L Sbjct: 258 GTIASAFTISQAQSTMEFFLSGSMAK-------------VLTLLVVVGILMLRPQGLFAL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|148975593|ref|ZP_01812464.1| ribose ABC transporter permease protein [Vibrionales bacterium SWAT-3] gi|145965021|gb|EDK30272.1| ribose ABC transporter permease protein [Vibrionales bacterium SWAT-3] Length = 330 Score = 72.6 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 82/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 32 LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 90 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + + + + + F Sbjct: 91 LCGAFAASMIGMEIPVMVAVPTALLAGAALGAISGVIIAK------------GKVQAFIA 138 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + + V++ Sbjct: 139 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYAMGVPVPVWIMVVVFASVWYL 198 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG A+ Sbjct: 199 L-----NHTRFGRYVYALGGNESATRLSGIDVDKVKIGVYAICGLLAAVAGIIVASRLSS 253 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V + GG + I+ + ++ + ++ Sbjct: 254 AQPTAGMGYELDAIAAVVLGGTSLAGGRGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 313 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 314 AKAVVILLAVLV 325 >gi|283787912|ref|YP_003367777.1| high-affinity branched-chain amino acid ABC transporter permease [Citrobacter rodentium ICC168] gi|282951366|emb|CBG91065.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 308 Score = 72.6 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ L++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGASENFSASITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|50084917|ref|YP_046427.1| branched chain amino acid ABC transporter permease [Acinetobacter sp. ADP1] gi|49530893|emb|CAG68605.1| putative branched-chain amino acid permease protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 548 Score = 72.6 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 90/291 (30%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ IGAY+ ++ S + + + +I+ I+ Sbjct: 275 ITYGLLGVINMAHGELIMIGAYTTYVVQSLFKAHLAHWVDWYLLIAIPAAFIVSALIGML 334 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 I + + +L + + + + + + + + + Sbjct: 335 IER--TIIRPLYGRQLETLLATFGVSLILMQAVRMVFGAQNVEVSNITWLSGGIALTPSL 392 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + +++ + ++ L +T R + N++ ++ + AF + Sbjct: 393 MLPYNRIAIIVFTVTILLLLVFLLNKTRFGLFIRAVTQNRQMARAVGIRSARIDMMAFGL 452 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A + + + ++ +V + + Sbjct: 453 GSGLAGLAGCALAQVGNVGPDLGQNYIIDAFLVVVVG--------------GVGQVWGAV 498 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + ++L+ + L+V+ L I R L ++ Sbjct: 499 LAALGLGVSGTILEIGLGAVLAKIILLVLV-ILFIQKRPQGLFAIKGRFVE 548 >gi|88705929|ref|ZP_01103638.1| Bacterial inner-membrane translocator [Congregibacter litoralis KT71] gi|88700000|gb|EAQ97110.1| Bacterial inner-membrane translocator [Congregibacter litoralis KT71] Length = 361 Score = 72.6 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 90/316 (28%), Gaps = 19/316 (6%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 Y S+ + L Y + A L ++ G GLLSL +A+G Y+ + R S Sbjct: 40 FALSSYSVSLLGKYLCYALLALALDLLWGYAGLLSLGHGAFFALGGYAMGMYLMRQIGSR 99 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + LP D A + I + + + + V Sbjct: 100 GVYGDPELPDFMIFLDWQELPWYWLGFDSFPFAMAMALLIPGILALVFGWLAFRSRVGGV 159 Query: 153 ADRLYFLGTTVRSLIRFF-------------------RFPSSFVIYEIFMYYVLLGMCFL 193 + T ++ FF F ++ V Sbjct: 160 YFSIMTQAMTFALMLAFFRNEMGFGGNNGLTDFKDVLGFDLQSDAVRCGLFVVTALTLLG 219 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 S + T + +RD + L ++ KL F +S+ G+AGA + Sbjct: 220 SYLACRKMLTTRFGSVIIALRDGESRVRFLGYSVASYKLVVFVISAMLAGLAGALYVPQV 279 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I+P F +I + V +GG +L I+ L + L Sbjct: 280 GIINPGEFAPLNSIEIAIWVAVGGRGTLHGAMLGAVIIAAAETLLTAQLPELWLFALGAL 339 Query: 314 CSFNMRHTTLMVIALF 329 L Sbjct: 340 FLLVTLFLPRGFAGLL 355 >gi|330836091|ref|YP_004410732.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374] gi|329747994|gb|AEC01350.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374] Length = 292 Score = 72.6 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 99/307 (32%), Gaps = 27/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + Y + A G +++ G L L + + Y GAY +L S G +L + Sbjct: 6 IINGITIGSTYALVAIGFTMIFGVLELTNFSNSSLYMFGAYITYLLYSIVGARFFLAFTI 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 S +++G G + + + ++ LI + ++ + G Sbjct: 66 SIVLTGVLGYGVDRFALRRLRKKRAPKLSGLITTLGMSMVIDNSVMVFFGTDSKS----- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + F +F + +L C L ++ + + RT I A I N Sbjct: 121 ------FTNFMDFGKFYVGNAVVTWTQVIILSVACILMITLSIIVYRTKIGKAMGAIAQN 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 Q A + F VS +AG A I S + + ILG Sbjct: 175 QDAARLMGINTNKVISFTFIVSGFLACVAGTMVAMYYRSIE-TSMGTSIGTKIFAAAILG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ L +L V + + + F L LV+L+ Sbjct: 234 GVGILPGAVVGGLVLGVVETMVSAYISTGYRDAISFT-------------ILILVLLIMP 280 Query: 337 HSLLRLR 343 + L + Sbjct: 281 NGLFGKK 287 >gi|317402585|gb|EFV83147.1| ABC transporter [Achromobacter xylosoxidans C54] Length = 293 Score = 72.6 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 113/303 (37%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y +FA G ++V G LG+++L + +GAY+ + + +GL +W + V Sbjct: 6 FVNALSLGCVYALFALGFTLVFGVLGVINLAHGAVFMVGAYAALSVVQHFGLPLWAALMV 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++G G+ L + + NG GI+ A L F Sbjct: 66 AFFVAGFTGV----IIDYLVLKPLRKRNAPHLIPMIATIGVGIILNNGAQGIFGASNLRF 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 TV + + + + ++ L A ++ +RRT A R I ++ K Sbjct: 122 PHGTVPEEV----IEIAGLHLTVIELGIIFLSFALMALLMFVMRRTQFGRALRAIAESPK 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + L + ++ ++A G+AG + + P M + + + +++ILGGM Sbjct: 178 AAWLLGINVEKLFITTSFAAAALGGVAGVLIGLYSNALFPLMGQPMLHKGI-AVIILGGM 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L L + F LFL++L+R Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|42527717|ref|NP_972815.1| galactoside ABC transporter, permease protein, putative [Treponema denticola ATCC 35405] gi|41818545|gb|AAS12734.1| galactoside ABC transporter, permease protein, putative [Treponema denticola ATCC 35405] Length = 564 Score = 72.6 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 36/340 (10%), Positives = 89/340 (26%), Gaps = 25/340 (7%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 +S F L Y IL + + G S I ++ Q + +A G++ ++ Sbjct: 223 LSSFLLSNGLYLAILVFFIICIIVAPLSGNGNLLSLPNIFTILEQASTRMFYALGVAGLI 282 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRG 119 G L+ A+G+ ++ + + + + + L Sbjct: 283 LLAG-TDLSIGRMVALGSVITGLILHPGLNIVTFFGLGPWDFTAMPMVWRLILSLGLSIL 341 Query: 120 DYLAIATLI-----------MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + + LI + + G +G + + V+ L+ Sbjct: 342 LCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGT----PVGSIDNEVKDLLG 397 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 I + +++ +T + N +A ++ Sbjct: 398 GRWILGIVNNEMITLPKLIIPALIAIVIAWFIWNKTVFGKNMYAVGGNSEAAAVSGISVF 457 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLS 282 + F ++ F G+ A + + I+ ++ GG+ +S Sbjct: 458 KVTMGVFIMAGVFYGVGSFLEAFRANA--SAGTGQGYELDAIAACVVGGISFNGGIGKIS 515 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 I + + + Sbjct: 516 GAVIGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIAAVAL 555 >gi|239816119|ref|YP_002945029.1| urea ABC transporter permease [Variovorax paradoxus S110] gi|239802696|gb|ACS19763.1| urea ABC transporter, permease protein UrtB [Variovorax paradoxus S110] Length = 304 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 88/301 (29%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+I+ G +G++++ IGAYS + +P I Sbjct: 18 LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYSIYLAARVTESLAPAFMPYYFPI 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + L + +L W + + T Sbjct: 78 AIGLAFVFAFIVGWIVEWVL--IRHLYKRPLDTLLATWGVSLGLQQIFRTFIGPKEVSPT 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P + I +VL ++ ++L L ++ R N+ + Sbjct: 136 LPEWLMGSWTPHEGLDIPINGLFVLALTALVTGGVLLALHKSRWGLRVRATVANRTMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + FA+ GMAGA A + + + +V GG SL Sbjct: 196 TGIDTMKTDRLTFAIGCGIAGMAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +L + L+++MR L + Sbjct: 254 GTVVSAFGIAQTQSISEFFMTGSMAKVLTLS-------------LIVLILMMRPQGLFAV 300 Query: 343 R 343 + Sbjct: 301 K 301 >gi|78355306|ref|YP_386755.1| branched-chain amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217711|gb|ABB37060.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 301 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 86/289 (29%), Gaps = 3/289 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + IGAY + L + GL+ L Sbjct: 8 LTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGLTLLTSMGLTGHLGAVA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ ++ + + ++ + + Sbjct: 68 GVLVLAVMVQVLVAIIGYLLERVAYRPLRQSPRL--SAVVSALGASIFFQNAVMLIYGAR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + + + L L + ++++T A R +Q Sbjct: 126 FQVYPHDILPSATVSLLGLDVPLVRILMFLTSVVLMLGLYFFIQKTRTGTAIRAAAIDQG 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + A G AG +I+ M + + + ILGG+ Sbjct: 186 AAKLMGINVNRVVSLVFLIGPALGGAAGLMVGLYYGQINFTM-GWVYGLKAFTAAILGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ++ +L + L + + F + + Sbjct: 245 GNIPGAMVGGLLLGVIEALGAAYISIAWKDAIAFFVLIIILIIRPTGLL 293 >gi|91978326|ref|YP_570985.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91684782|gb|ABE41084.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 308 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 95/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +Y++ A GL+I+ G +G++++ +GAY + + + + L P + Sbjct: 22 LILFSVYLLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNAFQAYLPSLFPGYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + I L + +L W + +G Sbjct: 82 AMILAFIASGALGMLVEWGL--IRHLYRRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + + I +V+ ++A++ + ++ R + N+ + Sbjct: 140 LPQWMLGSKQITDTIEVPINGIFVMCLTVLITATVAYVMYKSRWGRQVRAVVQNRVMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + G+AG+ F + + +V+ GG SL Sbjct: 200 VGINTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLF 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ +++MR L L Sbjct: 258 GTIASAFSISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMMRPQGLFAL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|327480108|gb|AEA83418.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 305 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 95/303 (31%), Gaps = 17/303 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + ++ A GL+I+ G +G++++ +GAY+ ++ + + L P Sbjct: 17 NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTFLVSTLTLKYVPALQPYYF 76 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++ ++ L + +L W + + Sbjct: 77 FVAIVLSFLIAGALGWLAEWALISK--LYHRPLDTLLATWGLSLVMQQAFRSIFGAREVS 134 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 ++ + P+ + +V+ L+ +I L R+ R N+ Sbjct: 135 ASMPDWLMGSFNPTDAIDIPRNGLFVMAVTLLLTLAIFFLLYRSRWGLQVRATVQNRVMA 194 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 S+ FA+ G+AGA A + + + +V+ GG S Sbjct: 195 RSVGINTKKVDRMTFALGCGVAGVAGA--AFTTIGSTGPTSGSLYIVDTFLVVVFGGAAS 252 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + + + +L A+ L++++R L Sbjct: 253 LFGTIASAFSIAQTQSIAEFFISGSMAKVLTLS-------------AVILILMLRPQGLF 299 Query: 341 RLR 343 ++ Sbjct: 300 SIK 302 >gi|326796936|ref|YP_004314756.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326547700|gb|ADZ92920.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 318 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 34/285 (11%), Positives = 76/285 (26%), Gaps = 9/285 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A GLS++ G ++L +GA+ ++ + +S W + Sbjct: 5 LLQGTLLGGYYAILAAGLSLMFGVARFINLAHGDNAILGAFIVLLGVEYFNMSPWFAMIG 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + I G + + L+ + ++ G Sbjct: 65 AIPIMYVLGWLTQKYVFDRTQRGGFLLPLLTTFGLAAVIQNGLFAGFGSDIRS------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + L + + V + + + L + A R + + Sbjct: 118 LADYIGDLSWDSWDLTDEISVGKLPVIVFVIAVVTLVGLQIVLSLSRFGRAVRATALDPE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A ++ +AG A ++ I V++GG+ Sbjct: 178 AAQLCGIDSAEVYRKITGIAFVLSAIAGVMLAMRASIAPYS--GPAQLIFAFEAVVIGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 SL L + + +F + L Sbjct: 236 GSLWGTLLGGIALGVAQSVGAFFDPQWFQLAGHSLFLLVLGVRFL 280 >gi|86145128|ref|ZP_01063459.1| ribose ABC transporter, permease protein [Vibrio sp. MED222] gi|218676703|ref|YP_002395522.1| ribose ABC transporter permease protein [Vibrio splendidus LGP32] gi|85836705|gb|EAQ54825.1| ribose ABC transporter, permease protein [Vibrio sp. MED222] gi|218324971|emb|CAV26807.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32] Length = 330 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 30/312 (9%), Positives = 87/312 (27%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 32 LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 90 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + + + + + F Sbjct: 91 LCGAFAASMIGMEIPVMIAVPTALVAGAALGAISGVIIAK------------GKVQAFIA 138 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F Y + + + M + A Sbjct: 139 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFG-----TGYAMGIPVPVWIMVVVFA 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ L T + N+ A + K+ +A+ +AG A+ Sbjct: 194 AVWYLLNHTRFGRYVYALGGNESATRLSGIDVDKVKIGVYAICGLLAAVAGIIVASRLSS 253 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V + GG + I+ + ++ + ++ Sbjct: 254 AQPTAGMGYELDAIAAVVLGGTSLAGGRGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 313 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 314 AKAVVILLAVLV 325 >gi|92119105|ref|YP_578834.1| inner-membrane translocator [Nitrobacter hamburgensis X14] gi|91801999|gb|ABE64374.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Nitrobacter hamburgensis X14] Length = 287 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 95/303 (31%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y M A GL++V G L +++L +GAY + L + + +L +P+ Sbjct: 8 LINGTLLGGLYAMMALGLALVWGVLNIVNLAHGAFIMLGAYVSLYLFTYLHIDPFLGLPI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A + A G + L TL+++ + +L + + Sbjct: 68 TAAVMFAIGYCVQRGLLNLIVRAPMFNTLLITFGLEVVLTYLAQLAFSADFRTINP---- 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V+ + L+ + ++L T + A R N Sbjct: 124 -------SYAGDSIVLGPVVLPLARLLAFGVAIALTVGMWVFLLHTTLGRAIRATAQNLV 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A F + A G AG + + +I I+GG+ Sbjct: 177 AARLYGVEPRHLYAVTFGIGIALAGTAGGLYGTVSQI--NPYIGAALTAKSFAISIIGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + L + L + + F L LV+++R Sbjct: 235 DNPLGVIVGGLFLGILESLTALYIGPTYADVASFG-------------VLVLVLIVRPTG 281 Query: 339 LLR 341 LL Sbjct: 282 LLG 284 >gi|13474353|ref|NP_105921.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14025106|dbj|BAB51707.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 346 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 129/328 (39%), Gaps = 16/328 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ + + S +++ + L + GL+I+ G G +SL A GA+ Sbjct: 21 VLLLAFAYGIVPLIGSSYLFEAILLPFLALGLAGVGLNILTGYAGQVSLGSAAFMAAGAF 80 Query: 80 SYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + R + I ++ +++ A G++ GLPSL+ +G YLA++TL Q L Sbjct: 81 AAYNFNLRVEGLPLIGSIVLAGIVAAAIGIVFGLPSLRLKGFYLAVSTLAAQFFVQWALT 140 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K+ +N A + + + Y L L + Sbjct: 141 KFSWFSNNSASGVIDAPRL-------------SIGGLALDGAVGRYLFALTTVALLTFLA 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRIS 257 L + + IRDN+ A + ++ KL AFA+SS IG+AG +A A + Sbjct: 188 HRLVTSQTGRNFIAIRDNETAARIIGIPVLKTKLLAFAISSFIIGVAGVIWAFAYLRTVE 247 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P F + ++ I+I+GG+ S+ A+++ + + + + Sbjct: 248 PAGFDLDRSFQILFIIIIGGLASIRGAFFGAALIVVFPLGLSRLGGFLLGDVFDSGV-LD 306 Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345 M ++ + L +++ L+ L Sbjct: 307 MSQRIVLGALIILFLILEPDGLVALWDR 334 >gi|83944067|ref|ZP_00956523.1| putative amino acid transmembrane transmembrane protein [Sulfitobacter sp. EE-36] gi|83955066|ref|ZP_00963722.1| putative amino acid transmembrane transmembrane protein [Sulfitobacter sp. NAS-14.1] gi|83840395|gb|EAP79568.1| putative amino acid transmembrane transmembrane protein [Sulfitobacter sp. NAS-14.1] gi|83844934|gb|EAP82815.1| putative amino acid transmembrane transmembrane protein [Sulfitobacter sp. EE-36] Length = 318 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 107/323 (33%), Gaps = 30/323 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + L+ M + GL+++ +G+L+ Y +GAY + W+ + Sbjct: 7 NLIDGLVTGLLLFMLSAGLTLIFSMMGVLNFAHASFYMLGAYFAYQISLAL--GFWMGLL 64 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ ++ G G + L+ Y + LI + ++ + GK + A Sbjct: 65 IAPLVVGVMGAGVERYGLRRVHQYGHVPELIFTFGLALLIEELVQFIWGKNQLPYA---- 120 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + F F S + +++ + ++ L +T + + Sbjct: 121 -----IPDALNFTAFAISGNSIPAYKIFMIFISISIFIGLLYVLTKTRVGMIIQAALSYP 175 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + +L + + F V +A G+AG + F IV +++GG Sbjct: 176 RTVEALGHNVPLIFMGVFGVGTALAGVAGVIAGPVLG--TFPGMAFVLGSIVFVTIVIGG 233 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-----------------FNMRH 320 + SL A+ ++ + N N L S Sbjct: 234 LGSLWGALIASLLIGWITTFAKSYNIEMENILTGLGISKPESLDDSIFRDFWSLTSPQIA 293 Query: 321 TTLMVIALFLVILMRSHSLLRLR 343 L I + L+++ R L R Sbjct: 294 DILPYILMVLILIFRPAGLFGKR 316 >gi|126656409|ref|ZP_01727670.1| high-affinity branched-chain amino acid transport permease protein [Cyanothece sp. CCY0110] gi|126622095|gb|EAZ92802.1| high-affinity branched-chain amino acid transport permease protein [Cyanothece sp. CCY0110] Length = 294 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 84/292 (28%), Gaps = 12/292 (4%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + + + + + A GL++ G L L + +GAY ++ ++ Sbjct: 10 TAQNLFDGLAIGSVIALAAVGLTLTYGILRLSNFAHGDFMTLGAYLTWLVNTQGLNLGLS 69 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 +I + A + L R TLI+ I + ++ + A D Sbjct: 70 VIVGATGTIVAMLISEFLLWKPMRDRRATSTTLIIISIGLALFLRNGILMIWGAKNQRYD 129 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + + ++ A + L L+ T I A R + Sbjct: 130 IPLVQAQKFLG-----------LQLATDRIWAIILSIVAIAVLHLVLQNTKIGKAMRAVA 178 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 DN + L + +++ + G + + + + + VI Sbjct: 179 DNIDLARVSGINVEKVVLWTWVITAILTTLGGVMLGLITSTV-RPNMGWFLILPMFASVI 237 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 LGG+ + ++ EL + + + I Sbjct: 238 LGGIGNPYGAIAGGLVIGVAQELSVPWLGPDYKLGVALFIMILILLIRPQGI 289 >gi|27376079|ref|NP_767608.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27349218|dbj|BAC46233.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 90/301 (29%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + + + + L + Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNFFQSYLPSLFSGYFFL 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + L + +L W + +G Sbjct: 82 AMILAFVASGALGMLVEWVL--IRHLYKRPLDTLLATWGLSLMLQQAYRSVFGAREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + I +V+ ++ + + ++ R + N+ + Sbjct: 140 LPQWMLGSLHVTDSIEVPINGVFVMCLTVLITLGVAYVMYKSRWGRQVRAVVQNRIMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + + G+AG+ F + + +V+ GG SL Sbjct: 200 VGINTEKVDRYTYGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ ++++R L L Sbjct: 258 GTIASAFSISQTQSTLEFFMSGSMAK-------------VLTLLAVVGILMLRPQGLFAL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|156936384|ref|YP_001440300.1| branched-chain amino acid transporter permease subunit LivH [Cronobacter sakazakii ATCC BAA-894] gi|260599754|ref|YP_003212325.1| branched-chain amino acid transporter permease subunit LivH [Cronobacter turicensis z3032] gi|156534638|gb|ABU79464.1| hypothetical protein ESA_04284 [Cronobacter sakazakii ATCC BAA-894] gi|260218931|emb|CBA34286.1| High-affinity branched-chain amino acid transport system permease protein livH [Cronobacter turicensis z3032] Length = 308 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y ++ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDASWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + +++ + I I + R Sbjct: 72 LVGAAFIGAIVVSSAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDV 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ L++R + + A R ++ Sbjct: 132 ALPSLFNGQWTIGSSENFAASITTMQLVIWVVTFIAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL LC + ++ F L V+L+ Sbjct: 251 IGSIPGAMIGGLILGVTESLCSAYLSTEYKDVVSF-------------ALLIGVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|121535944|ref|ZP_01667739.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1] gi|121305472|gb|EAX46419.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1] Length = 294 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G +GL++ + IGA+ +L + + L+++ + + Sbjct: 7 IINGLALGGIYSLIAIGWTVVFGIIGLINWTHGEVFMIGAFVGFLLITHFKLNLFAALIL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + SG ++ + + + +A I + L I L F Sbjct: 67 AMVASGFTAFLIDRLAYRPLRNGPRLALFITALGASTFLRNLAAIIWEPHSRAYPPTLDF 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + ++ + + A + ++ RT + A + + Sbjct: 127 SVMIFQ-------IGGASLTVNSLQVFIFVVTLVIMAFLQWFITRTMMGKAMLAASQDIE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F VS G AG M + ++ +LGG+ Sbjct: 180 TVSLMGVEVNHLVTITFWVSGLLGGAAGVLVG--VLYAIDPMMGAMAGLKGWAVAVLGGV 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S++ A +L + + + F I + LV++++ Sbjct: 238 GSITGAMIAGLLLGVAENIASAYISSGYRDAIAF-------------IVMILVLVIKPTG 284 Query: 339 LLRLR 343 L+ + Sbjct: 285 LMGFK 289 >gi|55379130|ref|YP_136980.1| branched chain amino acid transporter permease [Haloarcula marismortui ATCC 43049] gi|55231855|gb|AAV47274.1| branched chain amino acid transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 305 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 98/306 (32%), Gaps = 10/306 (3%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ + + I ++ + GLS+V + +GAY + +G ++ Sbjct: 6 QYLANGLVFSSIIILGSIGLSLVYSIADFANFAHGDTMTLGAYGAFVAFGVFGGLGGTVL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW-KPITNGKAGIYVADR 155 + + + M L ++ ++ + + ++ ++ Sbjct: 66 GLPIGFFLSLAVGMALAAVVAVLTHILVYKPLDTDSIGLLITSIGVAFVYRAVLQATFGT 125 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + RS + V +++ L A + L L+RT + R D Sbjct: 126 DFLQYDISRSGPIPVLLDTLNVAVTQRDVAIIVSAAVLVAGLHLLLQRTTLGRKMRATAD 185 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N L + V SA G F A F+ ++V + VIL Sbjct: 186 NPDLARVSGIRTDRVILVMWVVGSALAAAGGVFLALYSQL--DPRIGFNILLVVFAAVIL 243 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ ++ + EL ++ N + + + V+L+R Sbjct: 244 GGIGSVYGAMLGGLLIGMLHELTPLLSDVGLP-------VSNAYAPAVAFVIMVAVLLVR 296 Query: 336 SHSLLR 341 + Sbjct: 297 PRGIAG 302 >gi|294085354|ref|YP_003552114.1| branched-chain amino acid ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292664929|gb|ADE40030.1| ABC-type branched-chain amino acid transport system permease component [Candidatus Puniceispirillum marinum IMCC1322] Length = 328 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 122/331 (36%), Gaps = 33/331 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 ++ L+ LFL Q ++ + + L++ + A LS + LG++S + I Sbjct: 10 ALMIMGLVFLLFLPLFADQFWLTQIATRALLWGIIAISLSFLASYLGVVSFAQMTLAGIA 69 Query: 78 AYSYVILGSRYGLS------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 Y+ G + + + ++ + + G ++GL + G Y + TL + Sbjct: 70 GYTIAYFGPNTVENVGVLLPWPVTVILALLFATLAGALLGLICRRSTGIYAIMITLAIGM 129 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F + + + NG G D + + Y+++L + Sbjct: 130 TFFFLTRQNYSLLNGWNGFAGLDAP--------------IIAGIDISAPVPFYFLVLAVA 175 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 ++ +I ++ + + +RDN + S+ A ++A+AVS GM G Sbjct: 176 LFASLLIEGFIKSPLGLVIQAVRDNPERVMSVGIPSPPAIITAYAVSGLIAGMGGVLLVW 235 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 RIS + V+ I ++GG+ S I + + + Sbjct: 236 YYGRISSFSVGLDPILDVLIIAVIGGLRKPSGAFVGALIFVLI-------------DVFA 282 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 D R T++ + L L+++M L + Sbjct: 283 IDLISQDRFNTVIGLVLLLIMIMSPQGLSGM 313 >gi|88798757|ref|ZP_01114340.1| branched-chain amino acid ABC transporter, permease protein [Reinekea sp. MED297] gi|88778520|gb|EAR09712.1| branched-chain amino acid ABC transporter, permease protein [Reinekea sp. MED297] Length = 359 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 99/328 (30%), Gaps = 17/328 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYI-DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 LL V + + F+ + + + + ++ + G ++V G + +L+ Sbjct: 41 GLLLVAFAFIGFVLIPDPAAWMTLTIAGLAMGMMLFVMTSGFTLVFGLMDVLNFGHGAFI 100 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIF 133 + GA+ + + + I + + M+ + + + Sbjct: 101 SFGAFVGFSVMAMFPELIAAGSFWTHIGLFVLAMMGAAVVVGLLSWAFERLIIRHVYGNH 160 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 ++ + + ++ F ++E + ++ L Sbjct: 161 LMQILITTGGMIVAEEMIYVLWGHEERAWLKPDSFQGSFQFGDFVFEKYRLLAVIMGVVL 220 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + T + R +N++ SL I + F SA GM G + Sbjct: 221 FILLRWVFTHTRLGLLIRAGVENREIVKSLGFNIEKLFILVFIAGSALAGMGGVMWGLYD 280 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + I+ + I V + I+GG+ S+ A ++ + Sbjct: 281 EVITAH-IGQNLMITVFIVAIIGGLGSIEGCFLAALMVGLLTNYV--------------G 325 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 F +I + V+L R L+ Sbjct: 326 FIFPKLALVSTLILMVAVLLWRPKGLVP 353 >gi|192290001|ref|YP_001990606.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192283750|gb|ACF00131.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 336 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 125/327 (38%), Gaps = 23/327 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ +L+ Y + L+YV A +IV G G +SL + IGA Sbjct: 14 WLWGILVLAACLPLALNSYHLHLLTLALVYVALASAWNIVGGMAGQVSLAHSLFIGIGAM 73 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 L ++G+++W + +SA I+GA G ++ +F+ +L+ + ++ +I Sbjct: 74 LSTALLVKFGINMWAGLVISAAIAGALGAMIAWIDFRFQLGHLSFVLITLAFAEMGAIIV 133 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 G A + R + ++V+LG+ + + Sbjct: 134 EGWEFLGGASGLLLPRDTGDFWAFQ------------FGGGRGAFWVMLGLAAAVVLVNV 181 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + RTIRDN+KA ++ ++ K++A +S+ + G + P Sbjct: 182 AILNAPLGYYLRTIRDNEKAAQAIGVNVLRHKITAMTISAVLTSIVGTCYVRYLTFADPY 241 Query: 260 -MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + I ++ +GG+ A +L+ + E+ G + + Sbjct: 242 LLATPTITIEIVLFATVGGLGRAFGPALGALLLVPLGEVLRG----------QLGGAVPG 291 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 H + + + +VIL+ LL L Sbjct: 292 LHYFIYGVVVIVVILVTPRGLLPLAER 318 >gi|28493527|ref|NP_787688.1| branched-chain amino acid ABC transporter permease protein [Tropheryma whipplei str. Twist] gi|28572361|ref|NP_789141.1| ABC transporter branched chain amino acid transport permease [Tropheryma whipplei TW08/27] gi|28410492|emb|CAD66878.1| putative ABC transporter branched chain amino acid transport permease [Tropheryma whipplei TW08/27] gi|28476569|gb|AAO44657.1| branched-chain amino acid ABC transporter permease protein [Tropheryma whipplei str. Twist] Length = 334 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 69/266 (25%), Gaps = 5/266 (1%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 IY + A G ++V G LGL++ + G Y+ V S G S + ++ Sbjct: 33 LTFGAIYALIAVGYTVVYGVLGLINFAHAGVFVTGCYALVFTLSALGFSSFPSKKPIFIV 92 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYVADRLY 157 + + + L + + + + + R Sbjct: 93 LIYVLIAVFVSILAAAAVAFLVERVAYKPLRKRNAPNLAFLITAIGASLTISNLFFLRSP 152 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + F F +L L + ++RRT R + + Sbjct: 153 NPEPALSIFTPVPLFKFFGATVTSFNVVTILAAVILMFLVDWFIRRTRFGRGIRAVAQDP 212 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + F + G A F+ + + +LGG Sbjct: 213 NTASLVGVNPERVIALTFVLGGVIAGAASLFYVLKVPSGVVYNADIVLGLKAFAAAVLGG 272 Query: 278 MTSLSKIAKATAILIGVVELCCGMNF 303 + S+ +L + Sbjct: 273 IGSIRGALLGGLLLGLFSNWGALLLG 298 >gi|167916834|ref|ZP_02503925.1| ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 112] Length = 475 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 LA + + L + + ++ Q ++ A ++++G+ GLLS + Sbjct: 4 ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GA+ +RYGL + L+ A G + G + + G A+ TL + E+ Sbjct: 64 GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 G G+ + + Y ++ C ++A Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVIAAV 171 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT ++ +RDN +L T + + ++ F G+AGA + Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 + + + V+ ++GG T+ +L ++ + Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280 Query: 317 NMRHTTLMVIALFLVILMRSHS 338 + + V+L Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298 >gi|332528412|ref|ZP_08404404.1| branched-chain amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] gi|332042091|gb|EGI78425.1| branched-chain amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] Length = 304 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 93/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+I+ G +G++++ IGAY+ +L + L+P + Sbjct: 18 LSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTVFLLSTLTEKFAPDLVPFYFPV 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 S ++ + L + +L W + A + T Sbjct: 78 SIIVAFVLAFVAGWLVEWGL--IRFLYKRPLDTLLATWGLSLAVQQVFRSAIGPKEVSPT 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P + I +VL ++ +++ L ++ R N+ + Sbjct: 136 LPEWLMGSWAPHEGLDIPINGLFVLALTAVVTGGVLIALYKSRWGLRVRATVSNRTMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + FA+ G+AGA A + + + +V GG SL Sbjct: 196 IGINTSRTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYIVDSFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +L + +++++R L Sbjct: 254 GTVASAFGIAQTQSIGEFFITGSMAKVLTLS-------------LIVVILMIRPQGLFAS 300 Query: 343 R 343 + Sbjct: 301 K 301 >gi|325475071|gb|EGC78257.1| galactoside ABC transporter [Treponema denticola F0402] Length = 564 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 36/340 (10%), Positives = 90/340 (26%), Gaps = 25/340 (7%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 +S F L Y IL + + G S I ++ Q + +A G++ ++ Sbjct: 223 LSSFLLSNGLYLAILVFFIICIIVAPLSGNGNLLSLPNIFTILEQASTRMFYALGVAGLI 282 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRG 119 G L+ A+G+ ++ + + + + + + L Sbjct: 283 LLAG-TDLSIGRMVALGSVITGLILHPGLNIVTFFGLGPWDFTAMPMVLRLILSLGLSIL 341 Query: 120 DYLAIATLI-----------MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + + LI + + G +G + + V+ L+ Sbjct: 342 LCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGT----PVGSIDNEVKDLLG 397 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 I + +++ +T + N +A ++ Sbjct: 398 GRWILGIVNNEMITLPKLIIPALIAIVIAWFIWNKTVFGKNMYAVGGNSEAAAVSGISVF 457 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLS 282 + F ++ F G+ A + + I+ ++ GG+ +S Sbjct: 458 KVTMGVFIMAGVFYGVGSFLEAFRANA--SAGTGQGYELDAIAACVVGGISFNGGIGKIS 515 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 I + + + Sbjct: 516 GAVIGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIAAVAL 555 >gi|226356148|ref|YP_002785888.1| branched-chain amino acid ABC transporter permease [Deinococcus deserti VCD115] gi|226318138|gb|ACO46134.1| putative Branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] Length = 295 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 95/303 (31%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + GLS++ G + +++ AIG + + L + +L + V Sbjct: 13 LVQGLLTGGLYALIGTGLSLIFGVMKVINFAHGDFLAIGMFITLALFRTLNIDPYLSLLV 72 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A + A G + L GD L +++ + I+ + G + Sbjct: 73 AAPVGFALGYAIQRFVLTRLGDRLGEGSMLATLGLGLIISNTLLLGFGAQPQSINVP--- 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + V I + LG + A + L L RT + A R N Sbjct: 130 --------YAIKTFSFAGVQVSIPLLVAGLGTLVVIAGLNLLLYRTELGRAIRATAQNPL 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + F + AF +AG + + +LGG+ Sbjct: 182 GAELQGVRTANIQAIVFGMGVAFAAIAGVLLMPLLYA--FPTVGENYTTKAFIVTVLGGL 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L N +IA LV+L+R Sbjct: 240 GNLPGAVVGGLVLGVIESLGAFYVS-------------NNYRDAYGLIAFLLVLLLRPEG 286 Query: 339 LLR 341 L Sbjct: 287 LFG 289 >gi|148508166|gb|ABQ75957.1| ABC-type branched-chain amino acid transport system, permease protein I [uncultured haloarchaeon] Length = 312 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 19/306 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +++ + + ++ A G +++ G + +++L +G YS + Sbjct: 23 QFVVNGLLVGALFTAVAVGFALIWGVVDIINLAHGEMVMLGGYSSY-WILNFLTGDAEGS 81 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +I+ + + L + ++ I Sbjct: 82 VTLFLITIPLVIGIVFVIGYALQRILVARVIGTDIFLTLLVTFGISI---AIQQLAIQAW 138 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++ L + ++ +G L+ ++ ++L+RT A R + N Sbjct: 139 SANPRAIQILFTDPSLSVAGIVIPKMKLISFIGAIGLTVALYVFLQRTRTGRAIRAVSQN 198 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +A + + + F +SSA AGAF A + + IV+ G Sbjct: 199 PEAAALVGIDVEHTRAVTFGISSAIASGAGAFIATILNI--QPQMGLIYTLKSFVIVVFG 256 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ + +L V EL G+ + + F L ++++++ Sbjct: 257 GVGSIPGVFIGGLMLGTVEELTAGLVSSQWTLAVSFS-------------LLIVLLIVKP 303 Query: 337 HSLLRL 342 L Sbjct: 304 TGLFGE 309 >gi|24114717|ref|NP_709227.1| branched-chain amino acid transporter permease subunit LivH [Shigella flexneri 2a str. 301] gi|30065266|ref|NP_839437.1| branched-chain amino acid transporter permease subunit LivH [Shigella flexneri 2a str. 2457T] gi|24053931|gb|AAN44934.1| high-affinity branched-chain amino acid transport protein, membrane component [Shigella flexneri 2a str. 301] gi|30043528|gb|AAP19248.1| high-affinity branched-chain amino acid transport protein, membrane component [Shigella flexneri 2a str. 2457T] gi|281602805|gb|ADA75789.1| High-affinity branched-chain amino acid transport protein, membrane component [Shigella flexneri 2002017] gi|332749444|gb|EGJ79861.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella flexneri K-671] gi|332751135|gb|EGJ81538.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella flexneri 2747-71] gi|332763560|gb|EGJ93799.1| branched-chain amino acid transport system / permease component family protein [Shigella flexneri 2930-71] gi|332996243|gb|EGK15870.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella flexneri VA-6] gi|332996595|gb|EGK16220.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella flexneri K-272] gi|332997120|gb|EGK16736.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella flexneri K-218] gi|333012589|gb|EGK31970.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella flexneri K-304] gi|333013004|gb|EGK32380.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella flexneri K-227] Length = 308 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYCVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|154245510|ref|YP_001416468.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154159595|gb|ABS66811.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 339 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 118/304 (38%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +L++ A +IV G +SL + +GAY+ +L + G+S WL + V Sbjct: 32 LLRVAAMVLLFAAMAQSWNIVGGLANQISLGHAAFFGLGAYTSTLLFLKLGVSPWLGMFV 91 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A ++GA ++ +P+ + +G Y A+ATL +E+ + I W +T G G+ + Sbjct: 92 GAGVAGAAAALLSIPTFRLKGHYFALATLAFAEVMRVIANSWASLTGGPVGLSIPFMGTQ 151 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + Y+ +LG+ + L R AI R +R+N+ Sbjct: 152 PAYFAFRAVS-------------SYYWAILGLLVFVCLVFHLLARGAIGYRLRAVRENEN 198 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV--ISIVILG 276 A KL+A +S+A M G FA PD I V I I+G Sbjct: 199 AAEVAGVDTFRVKLTASVISAALTAMCGTVFAQFTFFFDPDSIFSLAGISVRMAMIAIVG 258 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +L LI + E+ + + L IL++ Sbjct: 259 GLGTLGGPLIGALFLIPLEEVANAY----------LSSKAAGLSQLVFGLILIAAILIQP 308 Query: 337 HSLL 340 ++ Sbjct: 309 RGVM 312 >gi|194397862|ref|YP_002037396.1| branched-chain amino acid ABC transporter permease [Streptococcus pneumoniae G54] gi|194357529|gb|ACF55977.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pneumoniae G54] Length = 289 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + + ++ ++ + V Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G Sbjct: 65 AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I+ R+ + +L L + + +++T + A R + + Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + + +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + ++ L L++++R Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279 Query: 339 LLR 341 +L Sbjct: 280 ILG 282 >gi|238896916|ref|YP_002921661.1| branched-chain amino acid transporter permease subunit LivH [Klebsiella pneumoniae NTUH-K2044] gi|262040517|ref|ZP_06013758.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|290511968|ref|ZP_06551336.1| branched-chain amino acid transporter permease subunit LivH [Klebsiella sp. 1_1_55] gi|329998308|ref|ZP_08303045.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Klebsiella sp. MS 92-3] gi|238549243|dbj|BAH65594.1| high-affinity branched-chain amino acid transporter membrane component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259042110|gb|EEW43140.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|289775758|gb|EFD83758.1| branched-chain amino acid transporter permease subunit LivH [Klebsiella sp. 1_1_55] gi|328538752|gb|EGF64837.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Klebsiella sp. MS 92-3] Length = 308 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTQGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + S + + ++ L++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSDSFSATITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|107100518|ref|ZP_01364436.1| hypothetical protein PaerPA_01001543 [Pseudomonas aeruginosa PACS2] Length = 297 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I + + +P+ Sbjct: 1 MVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIAFIAITLLAMMGLDSVPL 60 Query: 99 SAMIS-GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + A ++ I I + + Sbjct: 61 MMLAAFAASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 120 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + T + F + V+ + + + + L++ R+ + A R ++ Sbjct: 121 AIPTLLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 180 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A I+ F I + +LGG Sbjct: 181 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 239 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L + + ++ F L LV+L R Sbjct: 240 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 286 Query: 338 SLLRL 342 +L Sbjct: 287 GILGR 291 >gi|326317160|ref|YP_004234832.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373996|gb|ADX46265.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 440 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 114/328 (34%), Gaps = 18/328 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + L + + +M QI ++ +I++G G+LS + + Sbjct: 20 AVVWGLFALALIVAPMLFTSSLALTMLSQIGYLIIICLSYNILLGQGGMLSFGHAVYTGL 79 Query: 77 GAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 G++ V + + + L+ V + +++G + K G A+ TL + E Sbjct: 80 GSFMAVHAMNWAGKGALPVPLVLIPLVGGLAGMFFAVLLGFVTTKKSGTTFAMITLGIGE 139 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + ++ + + + G+ GI + F I +YY++ C Sbjct: 140 LVASMALMFPEVFGGEGGIT------------TDRVYGKGFFGITFGPAIQVYYLIAAYC 187 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 F+ +++ T + +RDN + + + AF +S F G+ GA A Sbjct: 188 FVCTALMFAFTGTPLGRMLNAVRDNPERVEFIGYNTQRVRYYAFIISGFFAGIGGALAAI 247 Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + ++ D + + LGG T +L+ L ++ + L Sbjct: 248 NFEIVTAADSVSVMRSGSYLLFTFLGGATFFFGPIIGAVLLVFASVLLSELSKAWLLYLG 307 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHS 338 M + + + + + H Sbjct: 308 LVFLFMVMYAPGGIASLIMMNLRVARHG 335 >gi|283798555|ref|ZP_06347708.1| galactoside ABC transporter, permease protein MglC [Clostridium sp. M62/1] gi|291073703|gb|EFE11067.1| galactoside ABC transporter, permease protein MglC [Clostridium sp. M62/1] gi|295092420|emb|CBK78527.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) [Clostridium cf. saccharolyticum K10] Length = 551 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 32/325 (9%), Positives = 85/325 (26%), Gaps = 9/325 (2%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 F LR Y I+ + + + + + + ++ Q + A G++ ++ Sbjct: 221 FLLRNGLYIAIILIFIALCIITPMVKGVPLLTYNNVLNILQQASPRMFLALGVAGLILLA 280 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G L+ +G + I+ + + + V S + + L Sbjct: 281 G-TDLSVGRMVGMGMTTATIIMHQGINTGMVFGHVFDFTSLPVPVRVIFALFM--CVVLC 337 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 ++ F I+ + + + + V P + Sbjct: 338 TFFTTIAGFFTAKFKMHPFISTMANMLVIFGLVTYSTKGVSFGAIESSIPGMIIPKINGF 397 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 ++L + +T + N +A ++ + AF ++ G Sbjct: 398 PTIILWAVAAVIIVWFIWNKTTFGKNLFAVGGNAEAAAVSGISVFRVTVGAFILAGILYG 457 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297 + + I+ ++ GG+ +S + I + Sbjct: 458 FGSWLECIRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTYS 517 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322 + + T Sbjct: 518 LTILGIDTNLQFVFSGIIILSAVTL 542 >gi|261420158|ref|YP_003253840.1| urea ABC transporter permease [Geobacillus sp. Y412MC61] gi|297529892|ref|YP_003671167.1| urea ABC transporter permease [Geobacillus sp. C56-T3] gi|319766970|ref|YP_004132471.1| urea ABC transporter permease UrtB [Geobacillus sp. Y412MC52] gi|261376615|gb|ACX79358.1| urea ABC transporter, permease protein UrtB [Geobacillus sp. Y412MC61] gi|297253144|gb|ADI26590.1| urea ABC transporter, permease protein UrtB [Geobacillus sp. C56-T3] gi|317111836|gb|ADU94328.1| urea ABC transporter, permease protein UrtB [Geobacillus sp. Y412MC52] Length = 297 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 89/309 (28%), Gaps = 18/309 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I ++ A GL+I G +G++++ +GAY+ ++ + + + Sbjct: 6 LFNGLSVGSILLLIAIGLAITFGLMGVINMAHGELMMVGAYTTYVIQRWFTSHMPHSAGL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + L + + L+ I+ Sbjct: 66 YFVAAIPLSFLAAALLGWGLEKSLIRH---LYRRPLDSLLATWGISLILQQTARLIFGAP 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V ++ ++L + + + ++L +T + + N+ Sbjct: 123 NVAVVPPSWLDGGIRLFGAVFPYKRLFLLCLVLAIVFFLYMYLMKTRAGRRIQAVTMNRS 182 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L +FA+ S G+AG + +VILGG+ Sbjct: 183 MAACLGIATQKVDAYSFAIGSGLAGVAGCALTLLGPI--GPTIGTYYIVDAFMVVILGGV 240 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L+ + + ++ + + + + Sbjct: 241 GKLAGTLLGAFGIGLISTFVEYSTSATIAK-------------VIVFVLIIAFLQWKPSG 287 Query: 339 LLRLRTPSN 347 LL +RT S Sbjct: 288 LLSVRTRSL 296 >gi|192289589|ref|YP_001990194.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192283338|gb|ACE99718.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 332 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 103/288 (35%), Gaps = 12/288 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + ++ L + I+++ L +V G G+ +L + +GA Sbjct: 20 LIAAAVIAVLGAIGYFVYPDDLAFLIRVIGLAFLVISLDLVTGYCGVATLGHAALFGVGA 79 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ L++ + A+ A G++ GL +FRG + ++ ++ + Sbjct: 80 YAAGNFCLAGVTDPILMLLIGALAGTATGLVSGLLVTRFRGLPQLVLSIAFGQLVAALAN 139 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K IT G G+ G +F ++ Y + + ++ + Sbjct: 140 KLSSITGGSDGLAGISPSPVFGI------------FNFDMFGRTGYVFSVIVLLVTMVTL 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ + R I+D+ + ++ + + V+ A G+ GA A + + Sbjct: 188 LRFARSPFALLCRAIKDDTLRTRMIGVSVYPRLVVMYCVAGAVAGLGGALTAINTGVVGL 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 D F + + ++ILGG +L + + +++ Sbjct: 248 DSVSFERSAEALIMLILGGAGNLWGALIGAILFELFHHYVSTASPFHW 295 >gi|311108035|ref|YP_003980888.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310762724|gb|ADP18173.1| inner-membrane translocator 48 [Achromobacter xylosoxidans A8] Length = 288 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 99/303 (32%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + Y + + GL+++ G + +++ IG Y ++ +++G+ + + Sbjct: 8 VINGLLLGGAYTIISLGLTLIFGVVRVVNFAHGEFLMIGMYMVYLIAAQFGVHPYAGLVP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+I A G + ++ + + + IL+ + G L Sbjct: 68 VAVILFALGALTQKGIIQPLLNADQHIQIFATVGVSTILLNLALVIFGANVYRAPVELGT 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + L+ + L++ RT + A R + ++ Sbjct: 128 NAIDIGPYSMVTG-----------QLITFVIGLSLAVLLHLFMHRTYLGRALRAVAQHRY 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + AF + +AF+G+A A F IV+LGG+ Sbjct: 177 AATLMGVNVNNVYAIAFGLGTAFVGIAAGLLAPQYPVFPTVGTYFVLT--AFVIVVLGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + I+ V L + L++++R + Sbjct: 235 GSLYGAVAGSMIIGIVDTLAGFYI-------------APDLKEVVYFGIFLLILVLRPNG 281 Query: 339 LLR 341 L Sbjct: 282 LFG 284 >gi|317154666|ref|YP_004122714.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] gi|316944917|gb|ADU63968.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] Length = 303 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 92/294 (31%), Gaps = 1/294 (0%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + I + Y + A G ++V G L L++ + +GAY + S ++ L Sbjct: 6 QNILNALQWGSFYALIALGYTLVYGVLTLINFAHGDIFMVGAYIAFFVASWLLGPVFGLD 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + ++ + + +A L + ++ + L Sbjct: 66 PTITFVLAIPLTMILTACVGVTLERIAYRPLRRKGAHRLYVVITALMCGLILEYGNLAAL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 L+ + V V+ + + + +T I A R I + Sbjct: 126 GASRKKFPDLLDKVIWDIGGVSVTNLKVLVIFAAIAVFIFLNFIVTKTKIGMAMRGISYD 185 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + I + F + S+F G+AG FA S + P M I+ V+ G Sbjct: 186 KFAIPLMGIPIDAIIVFTFILGSSFAGLAGLLFAMSYPILEPFMGALIGWKAFIAAVV-G 244 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 G+ + +L + + + L F + + Sbjct: 245 GIGDIRGAFYGGFLLGFIEVGVVTVFPSTYRDLFAFTILLAILWMKPTGLFGVA 298 >gi|330810581|ref|YP_004355043.1| High-affinity branched-chain amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378689|gb|AEA70039.1| putative High-affinity branched-chain amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 395 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 92/338 (27%), Gaps = 36/338 (10%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-- 84 + + +M + L Y A GL + G G+LSL + + +G Y + Sbjct: 24 IFVVFPLTLDAFRLNMVGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFGVGGYCMAMFLK 83 Query: 85 ----------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + S L L Sbjct: 84 LEASDPQSTKIQSTPGIPDFMDWNQITELPWLWVPFHSFSFTLLAVILVPVVLAFIIGMA 143 Query: 135 NILIKWKPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 + + I L + L + ++ +Y Sbjct: 144 LFKRRVGDVYFSIVSQAIALILTVLIVGQQGLTGGVNGITDLKTLLGWDLRSDSAKLLLY 203 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 ++ + F I ++ + + +RD ++ + K+ F +++AF + Sbjct: 204 FINAALLFGCIFIGRFVLASKLGRLLMAMRDKEERVRFSGYDVASFKIFVFCIAAAFSAI 263 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 GA FA +SP +I ++ +GG SL ++ Sbjct: 264 GGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGALLVNYGKTY------- 316 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F SF LM V++ + L L Sbjct: 317 -------FSESFPELWLYLMGGLFIAVVMYFPNGLAGL 347 >gi|330502355|ref|YP_004379224.1| inner-membrane translocator [Pseudomonas mendocina NK-01] gi|328916641|gb|AEB57472.1| inner-membrane translocator [Pseudomonas mendocina NK-01] Length = 307 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 86/290 (29%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y + + + +PV Sbjct: 11 LLNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFTVIAGLAMFGIDAVPV 70 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + A MI+ I I + + Sbjct: 71 IMVAAFAATMIVTSAYGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVLLAQDSKDK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + ++ V+ + + + L++ R+ + A R ++ Sbjct: 131 AIPNPLPGNFILGESAANGVVVSYMQVLIFIVTFITMVGLTLFISRSRLGRACRACAEDL 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A + I+P F I + +LGG Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAIASVLLGMNYGVINPH-LGFLAGIKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ +L + + ++ F + I Sbjct: 250 IGSIPGAVLGGLLLGVSEAFGADIFGDQYKDVVAFSLLVLVLLFRPTGIL 299 >gi|300718819|ref|YP_003743622.1| high-affinity branched-chain amino acid ABC transporter permease [Erwinia billingiae Eb661] gi|299064655|emb|CAX61775.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 308 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDVSWM 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 +++ + I I + R Sbjct: 72 LIGAGFIVAIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ L++R + + A R ++ Sbjct: 132 ALPSLITGQWTLGESNGFSATISTMQVVIWVVTFLSMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|88601638|ref|YP_501816.1| inner-membrane translocator [Methanospirillum hungatei JF-1] gi|88187100|gb|ABD40097.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Methanospirillum hungatei JF-1] Length = 293 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 12/284 (4%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 IY++ A GL+++ G + +++ +G Y L G + ++L+ S + Sbjct: 16 LYTGCIYILLATGLNLIFGVMKIVNFAHGEFLMLGTYITFFLFVMSGFNPYVLLCASIPL 75 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 G+I+ + + + +S I+ T Sbjct: 76 LVVIGVIVERLCFRPILGTGKLNEIFVSIGLIYIIQNLVARIW-----------TDEWKT 124 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++S R + + ++ L S+ ++L T A R ++K Sbjct: 125 IQSPFRDISVDLGVIQVPLDYLIIMAVTAILLISLYIFLHHTWTGQAIRATSQDRKGAML 184 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + + F + +A G AG +A S ++ I +I+ILGG+ S+ Sbjct: 185 MGINVERMDMVTFGIGAALAGAAGTLWAVS-GQVFNPYMGSIPAIKAFAIIILGGLGSIP 243 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + V + + F + + Sbjct: 244 GAIVGGLAVGLVENGTAFTLGGAWKDAVSFILLIIVLIIRPTGL 287 >gi|302336777|ref|YP_003801983.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293] gi|301633962|gb|ADK79389.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293] Length = 376 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/325 (11%), Positives = 91/325 (28%), Gaps = 11/325 (3%) Query: 4 FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63 FS+ + + + ++ S + +M I+ + A G++ V+ Sbjct: 29 FSIGMLVLKLRTLIAFLAVLIVFSFIAPNFLSITNLIAMAKHSAIWAILAVGMTYVI-IG 87 Query: 64 GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123 G + L+ + L + I + + +++ + L + L Sbjct: 88 GGIDLSIGSIVGLCGMIAGGLIAEGLRLPIFGIVIYFNVPMIILIVLLIGVLLGAVNGLI 147 Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 I L ++ + + + F + FP + + Sbjct: 148 ITKLGVAPFIATL---GMLYMGRGFAMLRSGGKTFPNLIGNPALGNTGFPILGAGTMLGI 204 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 V+ ++ ++T + N+ A + K++ F S Sbjct: 205 PLVVWIAAVIAIIAAYVSQKTPFGRHIYAVGGNEDAAVLSGIRVNRLKMAIFMFSGFTAA 264 Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297 + G A+ S + + I+ V+L GG S+ IL + + Sbjct: 265 LTGLVLASQL-VASHPATGEAYEMTAIAAVVLGGASLNGGRGSIGGTIIGALILGVLNDG 323 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322 + F + Sbjct: 324 LVMIGVSSFWQTAIKGMVLVLAVVI 348 >gi|293400320|ref|ZP_06644466.1| high affinity branched-chain amino acid ABC transporter, permease protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306720|gb|EFE47963.1| high affinity branched-chain amino acid ABC transporter, permease protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 293 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 91/289 (31%), Gaps = 11/289 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I+ + A G ++V G + L++ Y +GAY + GL + + + Sbjct: 8 LINGLSVGSIFALIALGYTMVYGIIKLINFAHGDIYMLGAYVGFFASTSLGLGFFPTMLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I G+++ + K I +LI + L G + Sbjct: 68 AMVICMVAGVLIEKIAYKPLRHASRITSLITAIGVSLFLEYAMMYFMGPNIRTYPADFFP 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + + L ++ L +++T I A R + + Sbjct: 128 REV----------YTFAGLQISNHQILIFVTSILLMIALQLIVKKTKIGKAMRAVSTDPD 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I P M + + GG+ Sbjct: 178 AAALMGINVNNTISFTFALGSALAGAAGVMIGMYYNSIDPLM-GMIPGLKAFIAAVFGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + + + L G F + + + + Sbjct: 237 GIIPGAMLGGEAIGILETLASGYGFSMIKDAVVYLILIVILIIKPSGLL 285 >gi|255746053|ref|ZP_05420000.1| ribose ABC transport system permease protein RbsC [Vibrio cholera CIRS 101] gi|255735807|gb|EET91205.1| ribose ABC transport system permease protein RbsC [Vibrio cholera CIRS 101] Length = 327 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLVIVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|254455864|ref|ZP_05069293.1| ABC-type branched-chain amino acid transport system, permease protein II [Candidatus Pelagibacter sp. HTCC7211] gi|207082866|gb|EDZ60292.1| ABC-type branched-chain amino acid transport system, permease protein II [Candidatus Pelagibacter sp. HTCC7211] Length = 349 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 94/334 (28%), Gaps = 25/334 (7%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + +L+F + + I + ++ A +I G +G S ++ Y +G Sbjct: 5 LILYIGILIFGIAAPFIFPAFKVQLSIL-CVLIILATTWNIQGGEMGYNSFGNILFYGLG 63 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL-------PSLKFRGDYLAIATLIMS 130 Y + + + +A Sbjct: 64 MYLCASVQVGMFFPLAEWTESGGEKTFVHTPTQFFQGMAVGLIVAAVVPTIVAGLIGYSI 123 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 + + G A ++ + +G F S F Y++ Sbjct: 124 LGLRGHYFAICTLGLGVAAGEISGGIEIIGAGQGFTTPPFPDVGSLESRGEFFYFLSFFT 183 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L+ + + T IRDN+ ++ + K+ + +S+ F G+AG Sbjct: 184 LVLTFIAVRSIYPTRFKLILNAIRDNEDKAEAMGIETMKYKIIGWMISAFFCGLAGGIMG 243 Query: 251 ASRDRISPDMFKFS---ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 I F + ++ + ILGG +L + E Sbjct: 244 GLVGYIDSTDVAFDGREMGVFMVLMAILGGKGTLWGPIIGATVFHIFKE----------- 292 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F F + + + ++++ ++ Sbjct: 293 ---GFWTFFLGWQYVALGVLIVVIVIYFPEGIMG 323 >gi|161505893|ref|YP_001573005.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867240|gb|ABX23863.1| hypothetical protein SARI_04072 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 308 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +++ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFIGAIIVASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWMVGSSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|170743765|ref|YP_001772420.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168198039|gb|ACA19986.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 290 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 100/307 (32%), Gaps = 26/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I Y + GL+++ G + +++ Y +GAY + + GL+ +L +P Sbjct: 8 LVNTLILGGTYALLGVGLTLIFGIMNVVNFTHGALYTVGAYLMYLAVAALGLNFFLALPA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + A G ++ L L+ T+++ +L T G V Sbjct: 68 AILGGLALGAVIELLLLRPLRGQDIDTTMLVMIGAGIVLQSGTLWTFGGVAKAVPSPFPE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V +VL G L + RT + A R + Sbjct: 128 AP-----------LRLGPVSVSWLSLFVLGGALLLIGLTYALINRTRLGLAMRAAFQDSD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + FA+ S+ AGA + + +IVILGG+ Sbjct: 177 TAALMGVDVRGIYTATFALGSSLAAAAGALLGPV--YVVFPQMGQLAELKAFAIVILGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ A IL EL G + + F + + V+L R Sbjct: 235 GNVTGAAIGGFILALAEELGAGYVSSGYRDAMGF-------------LIIIAVLLWRPTG 281 Query: 339 LLRLRTP 345 L Sbjct: 282 LFAKAER 288 >gi|121586849|ref|ZP_01676630.1| ribose transport system permease protein RbsC [Vibrio cholerae 2740-80] gi|121726989|ref|ZP_01680185.1| ribose transport system permease protein RbsC [Vibrio cholerae V52] gi|153817721|ref|ZP_01970388.1| ribose transport system permease protein RbsC [Vibrio cholerae NCTC 8457] gi|153821641|ref|ZP_01974308.1| ribose transport system permease protein RbsC [Vibrio cholerae B33] gi|262162109|ref|ZP_06031124.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae INDRE 91/1] gi|262167064|ref|ZP_06034780.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae RC27] gi|121548892|gb|EAX58933.1| ribose transport system permease protein RbsC [Vibrio cholerae 2740-80] gi|121630623|gb|EAX63012.1| ribose transport system permease protein RbsC [Vibrio cholerae V52] gi|126511763|gb|EAZ74357.1| ribose transport system permease protein RbsC [Vibrio cholerae NCTC 8457] gi|126520838|gb|EAZ78061.1| ribose transport system permease protein RbsC [Vibrio cholerae B33] gi|262024519|gb|EEY43204.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae RC27] gi|262028184|gb|EEY46842.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae INDRE 91/1] Length = 327 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|222152611|ref|YP_002561786.1| branched-chain amino acid ABC transporter permease [Streptococcus uberis 0140J] gi|222113422|emb|CAR41101.1| branched-chain amino acid transport system permease protein [Streptococcus uberis 0140J] Length = 289 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 104/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ + +GA+ L + + L+ +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLFMMGAFIGFYLINVFHLNFFLALVL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ GM++ + + IA LI + +L G L Sbjct: 65 TMILTAILGMLIEFLAYRPLRHSTRIAALITAIGVSFLLEYGMVYLVGAEARAFPQALKT 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + +L L + +++T + A R + + Sbjct: 125 VK-----------YNLGPIAITNVQVIILTVSLLLMLGLQFIVKQTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I+P M + I +LGG+ Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGIKAFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A I+ + + ++ L +++L+R Sbjct: 233 GIIPGAALGGFIIGLLET-------------FSVSIGLSSYRDAIVYAVLIVILLIRPAG 279 Query: 339 LLR 341 L Sbjct: 280 LFG 282 >gi|119871831|ref|YP_929838.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184] gi|119673239|gb|ABL87495.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184] Length = 323 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 111/327 (33%), Gaps = 12/327 (3%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 +V L S + + I + A GL++ + + + +G Sbjct: 9 LIVILLAAGWLFSLIYSTRLAVDGVMYSSILALAAVGLTMTYITTKVPNFAHGAIMGVGT 68 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + + L ++G+S ++ ++ S A +++ + + L+M+ + NI+I Sbjct: 69 LTALALSQKFGISPYVAGLIALPFSIAISVVLYYTLMPIYKRGASPTILMMASMAYNIII 128 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 +AD L + + + L + SA + Sbjct: 129 LGAL-------NAIADYLGRIWGIFTRGYTLRSMDFNIGDFPGLAIIGPLSVALTSAVLY 181 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 ++L +T + A R +N++ SL + A L A+ ++ G +GA Sbjct: 182 IFLVKTKLGIALRAAVENEELARSLGIDVDRAYLVAWIIAGVLAGYSGAVLTLYLSV--E 239 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + + I GG++++ + V + Y + + Sbjct: 240 PDTGWMILANIFAASIAGGLSNIFGAVLGAFFMGFVE---VPLATYIASIVAIEPYVVLQ 296 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 L +IA+ L +++ L LR Sbjct: 297 YRPLLPLIAVALFLIIIPQGLTSLRRR 323 >gi|119386636|ref|YP_917691.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119377231|gb|ABL71995.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Paracoccus denitrificans PD1222] Length = 333 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 83/309 (26%), Gaps = 16/309 (5%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---------WLLIPVS 99 + A G++++ G L + A GA +++ L +P Sbjct: 25 LALGALGVTLIYGILRFSNFAHGDTMAFGAALVILITWGLQSIGVSLGPLPTALLALPFG 84 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ + +F + +++ + I + Sbjct: 85 IALTAVFILGTDRVVYRFYRSKRSAPIILVMASVGVMFIMNGLTRLIIGVDEIRFDDGAR 144 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 R + S + + L+ ++ +L R+ A R DN+ Sbjct: 145 FLITVQQFRAWTGLSEGLSLRVSQALTLVVTALACWALFRFLNRSRAGKAMRAYSDNEDL 204 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + +++A AG + + F + + + I+GG+ Sbjct: 205 ALLSGIDPERVVRLTWIIATALAVTAGTLYGLDKSF--KVFNYFQILLPIFAAAIVGGLG 262 Query: 280 SLSKIAKATAILIGVVELCCG-----MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 + I+ + F + + L +V+L Sbjct: 263 NPLGAVAGGFIVAFSEVAVTYPWRKIATYLGFQPDGLLQLLSTEYKFAVSFVILIVVLLF 322 Query: 335 RSHSLLRLR 343 R L R + Sbjct: 323 RPTGLFRGK 331 >gi|206577952|ref|YP_002236178.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Klebsiella pneumoniae 342] gi|288933165|ref|YP_003437224.1| inner-membrane translocator [Klebsiella variicola At-22] gi|206567010|gb|ACI08786.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Klebsiella pneumoniae 342] gi|288887894|gb|ADC56212.1| inner-membrane translocator [Klebsiella variicola At-22] Length = 308 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTQGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + S + + ++ L++R + + A Sbjct: 129 ----RDVALPSLFNGQWIVGHSDSFSATITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|39934062|ref|NP_946338.1| branched chain amino acid ABC transporter permease [Rhodopseudomonas palustris CGA009] gi|39647910|emb|CAE26430.1| possible branched-chain amino acid ABC transporter, permease protein [Rhodopseudomonas palustris CGA009] Length = 332 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 103/288 (35%), Gaps = 12/288 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + ++ L + I+++ L +V G G+ +L + +GA Sbjct: 20 LIAAAVIAVLGAIGYFVYPDDLAFLIRVIGLAFLVISLDLVTGYCGVATLGHAALFGVGA 79 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+ L++ + A+ A G++ GL +FRG + ++ ++ + Sbjct: 80 YAAGNFCLAGVTDPILMLLIGALAGTATGLVSGLLVTRFRGLPQLVLSIAFGQLVAALAN 139 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 K IT G G+ G +F ++ Y + + ++ + Sbjct: 140 KLSSITGGSDGLAGISPSPVFGI------------FNFDMFGRTGYVFSVIVLLVTMVTL 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 L R+ + R I+D+ + ++ + + V+ A G+ GA A + + Sbjct: 188 LRFARSPFALLCRAIKDDTLRTRMIGVSVYPRLVVMYCVAGAVAGLGGALTAINTGVVGL 247 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 D F + + ++ILGG +L + + +++ Sbjct: 248 DSVSFERSAEALIMLILGGAGNLWGALIGAILFELFHHYVSTASPFHW 295 >gi|313647245|gb|EFS11697.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella flexneri 2a str. 2457T] Length = 300 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 4 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 63 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 64 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 120 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 121 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 176 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 177 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYCVINPY-IGFMAGMKAF 235 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 236 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 282 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 283 VLLVMPTGILGR 294 >gi|262273949|ref|ZP_06051761.1| ribose ABC transport system permease protein RbsC [Grimontia hollisae CIP 101886] gi|262221759|gb|EEY73072.1| ribose ABC transport system permease protein RbsC [Grimontia hollisae CIP 101886] Length = 326 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 32/312 (10%), Positives = 88/312 (28%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q I + A G+++V+ + G + L+ A Sbjct: 28 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSINAIIAVGMTLVILTAG-IDLSVGSVLA 86 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 87 LCGAFAATLIAMEVPVLVAVPTALFAGAALGAISGIIIAK------------GKVQAFIA 134 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F Y + + + M + A Sbjct: 135 TLVTMTLLRGVTMVYTEGRPISTGFTDTADAFAWFG-----TGYALGIPVPVWMMVVVFA 189 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ L T + N+ A + K+ A+A+ +AG + Sbjct: 190 AVWYLLNHTRFGRYIYAVGGNESATRLSGIDVDKVKIGAYAICGLLAALAGIIVTSRLSS 249 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 250 AQPTAGMGYELDAIAAVVLGGTSLMGGKGHIMGTLIGALIIGFLNNALNLLDVSSYYQMI 309 Query: 311 KFDCSFNMRHTT 322 Sbjct: 310 AKATVILAAVMV 321 >gi|313891245|ref|ZP_07824863.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120312|gb|EFR43433.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] Length = 289 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 107/303 (35%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ + +GA+ L + + L++++ + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLFMMGAFIGYYLINVFHLNLFVALLL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + GM++ + + IA LI + +L G L Sbjct: 65 TMVFTACLGMLIEFLAYRPLRHSTRIAALITAIGVSFLLEYGMVYLVGAEARAFPQALKT 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + V +LL L + +++T + A R + + Sbjct: 125 VK-----------YSLGPVSISNVQMIILLVSILLMIGLQFVVKQTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I+P M + I +LGG+ Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGIKAFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + F+ ++ L ++L+R Sbjct: 233 GIIPGAALGGFMIGLIETI-------------SVSIGFSSYRDAMVYAVLIQILLIRPAG 279 Query: 339 LLR 341 LL Sbjct: 280 LLG 282 >gi|291619272|ref|YP_003522014.1| LivH [Pantoea ananatis LMG 20103] gi|291154302|gb|ADD78886.1| LivH [Pantoea ananatis LMG 20103] Length = 308 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y ++ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMVIAALMMMGIDTSWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 +I+ + I I + R Sbjct: 72 MIAAGFVIAVIISSAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ L++R + + A R ++ Sbjct: 132 ALPSLITGQWTLGESNGFAATLSTMQLVIWVVTFLTMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +AG I+ F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSIN-PFIGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|170745118|ref|YP_001766575.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] gi|170658719|gb|ACB27773.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] Length = 290 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 100/307 (32%), Gaps = 26/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I Y + GL+++ G + +++ Y +GAY + + GL+ +L +PV Sbjct: 8 LVNALILGGTYALLGIGLTLIFGIMNVVNFTHGALYTVGAYVMYLAVAALGLNFFLALPV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G + L L+ T+++ +L T G + Sbjct: 68 AILGGLLLGAAIELLLLRPFRGSDIDTTMLVMIGAGIVLQSGTLWTFGGVAKAIPSPFPE 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V V +VL L A + RT + A R + Sbjct: 128 APLQV-----------GPVSVSWLRLFVLGAALTLIALTYALINRTKLGLAMRAAFQDSD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + FA+ S+ AGA + + +IVILGG+ Sbjct: 177 TAALMGVDVRRIYTATFALGSSLAAAAGALLGPV--YVVFPQMGGLAELKAFAIVILGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ A IL EL G + + F + + V+L R Sbjct: 235 GNVTGAAIGGFILALAEELGAGYVSSGYRDAMGF-------------LIIIAVLLYRPTG 281 Query: 339 LLRLRTP 345 L Sbjct: 282 LFAKAER 288 >gi|39935479|ref|NP_947755.1| ABC transporter permease [Rhodopseudomonas palustris CGA009] gi|192291045|ref|YP_001991650.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|39649331|emb|CAE27853.1| possible permease of ABC transporter [Rhodopseudomonas palustris CGA009] gi|192284794|gb|ACF01175.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 354 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 96/287 (33%), Gaps = 3/287 (1%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V L+ S Y ++V A L ++ G G LS + I Y Sbjct: 26 VFVLALVGALAYPMFSDGYTVGNTAYFFVWVFIALSLCLIWGYGGALSFGQTAFFGIAGY 85 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILI 138 SY IL +G + + ++ L + L ++ +L Sbjct: 86 SYGILTLNFGAAYGFTLVALLAAVAIAAVVALLLGYFMFFGRIEGVFLGIVTLAVTLMLE 145 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--IFMYYVLLGMCFLSAS 196 ++ T G A RL + ++ + +YY++L + + Sbjct: 146 RFMAQTAGPEWRIGAARLNGFNGMSGMPPITIPWFDGPIVLFADVGLYYLILALVVVVYL 205 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L ++ N IR+N + L I +L F + + G++G + A I Sbjct: 206 GLRILVNSSFGNVIVAIRENPERAEMLGYDIRKYQLINFVIGAGLAGLSGVLYTAWGQYI 265 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 +P + + + V +GG + L+ T +++ + Sbjct: 266 TPSSMGMTSAALPLIWVAVGGRSDLTSTLVGTLVVLAGFQALTIYGS 312 >gi|145591711|ref|YP_001153713.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514] gi|145283479|gb|ABP51061.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514] Length = 371 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 117/369 (31%), Gaps = 48/369 (13%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + + + Q Y+ + + + IY++ L++ G G+ + V+ Sbjct: 4 FVGLIIYALSVAAVAAAGRDVQSYLLTTIVDVAIYLIITLSLNLEAGIGGIPNFGRVLTV 63 Query: 75 AIGAYSYV-------------------------------ILGSRYGLSIWLLIPVSAMIS 103 A GAY + + L + +S + Sbjct: 64 AFGAYMAGGVIGRIALWAKGMSYDYIYDNAAAVSALSKSMTAVDAAAMLALGVAISIAVG 123 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 + G+I LP+ + DYLAI L ++ I + ++P+ G G+ Sbjct: 124 ASLGLIASLPARRLSADYLAITLLAFGDVAYYIGLNYEPLVGGTLGVSAPP--------- 174 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 + + + I V G L +I L ++ R R++ + L Sbjct: 175 ----IYEKLFGGGTMRLIGAVAVSAGAALLVYLLIQRLSQSPFGRILRIHREDPELVSVL 230 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENIIVISIVILGGMTSLS 282 + + A+ A +AG +A + P F+ + I+ILGGM + Sbjct: 231 GRDPAYIRAWTMAIGGAVSAVAGLLYALYAGAVHPRGFERINFTFYPWLIMILGGMGNNL 290 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + I + + ++ + + L LVI + L+ Sbjct: 291 GVVNGVFIFVVI---YRILDIFKYEIGNAVGFDPVWLGYMLFGGLAMLVIALAPRGLVPE 347 Query: 343 RTPSNFLER 351 + R Sbjct: 348 KAEPVVGGR 356 >gi|90022615|ref|YP_528442.1| branched-chain amino acid ABC transporter permease [Saccharophagus degradans 2-40] gi|89952215|gb|ABD82230.1| inner-membrane translocator [Saccharophagus degradans 2-40] Length = 383 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 87/343 (25%), Gaps = 36/343 (10%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + L L + + ++ + L Y A L ++ G G LSL I + +G Y+ Sbjct: 19 LILAALILVVFPVCLDLFRLNLVGKYLTYAFAAVSLVLLWGYGGTLSLGQGIFFGLGGYA 78 Query: 81 YVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + + + + + Sbjct: 79 MAMFLKLEASSPENTAIQSTPGIPDFMDWNQLTELPWFWVPFNSLTFTILAILIVPTVFA 138 Query: 129 MSEIFQNILIKWKPITNGKAGIYVA----------DRLYFLGTTVRSLIRFFRFPSSFVI 178 + + VA + L + + Sbjct: 139 YVIGAAMFKRRVGGVYFAIITQVVAVILTVLIVGQQGFTGGINGITDLRTLNGWDITSDS 198 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + Y++ + + ++ + +RD + + K+ F ++ Sbjct: 199 AKYIFYFLNCFLLLGVIMLGRFILTSKFGRLLLAMRDKEDRVRFSGYDVSNFKIFIFCIA 258 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 + + GA F +SP +I ++ +GG SL T ++ Sbjct: 259 ALMSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFCAIGGRMSLIGAVYGTLLINF----- 313 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F SF LM V++ + L Sbjct: 314 ---------GKTAFSESFPQLWLFLMGGLFIAVVMFFPNGLAG 347 >gi|149201135|ref|ZP_01878110.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. TM1035] gi|149145468|gb|EDM33494.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. TM1035] Length = 394 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 97/362 (26%), Gaps = 36/362 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + +L G + + L + A + +V G G+LSL + Sbjct: 26 LALFTLGVTVLSEGFGIALLSTSMVKILGMTLCLCLIAVAMDVVWGYCGILSLGHFAFFG 85 Query: 76 IGAYSYVILGSRYGLSIWLL-------------------------------IPVSAMISG 104 +G Y+ + ++ +P + Sbjct: 86 LGGYAIGMWLMYARTQGIVVESLSAAPIPPTQSEVQNAIASQIFGVVGSNELPWLWGFAH 145 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 + + + + L L L + + A + Sbjct: 146 SLTLQLLMVLLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDTGLRGNN 205 Query: 165 SLIRFFRFPSSF----VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 L P ++ ++ L + WL + R IRDN+ Sbjct: 206 GLSGLQNIPGLDHVPQSTLSLWFFWASALALGLGYLLFAWLVSAKFGSVIRAIRDNEARV 265 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 L + KL F +++ +AGA + I+P +I + V +GG Sbjct: 266 RFLGYDVESYKLVIFTLTAVVSAIAGALYYPQAGIINPAEIAPIASIYLAVWVAIGGRGR 325 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L A++ G N + ++ L+ + V L + Sbjct: 326 LYGAVIGAAVVSLASSWFTGGGAPNINLGF-YTINWTDWWLVLLGLGFVAVTLFFPRGIG 384 Query: 341 RL 342 L Sbjct: 385 GL 386 >gi|224371731|ref|YP_002605895.1| ABC-type branched-chain amino acid transport-system, permease component [Desulfobacterium autotrophicum HRM2] gi|223694448|gb|ACN17731.1| ABC-type branched-chain amino acid transport-system, permease component [Desulfobacterium autotrophicum HRM2] Length = 291 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 93/290 (32%), Gaps = 13/290 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ S +Y + A GLS++ S L++ GA V L + L + L Sbjct: 6 QYLFSGITIGAVYAVVAIGLSMLYRSTELINFAHGEFAMFGALGLVTLWGQLHLPLPLAF 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +S GM+ +L+ D I +I++ + GK + + Sbjct: 66 VLSVTGVACVGMVFERFALRPVKDPNPITLVIITVGASIVFRGIAMNVWGKDPVSLPP-- 123 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + Y++ L+ ++ L+ R T A N Sbjct: 124 ---------FSDLESIEIAGAVIVPQSLYIVGAALVLAGTLHLFFRYTIQGKAMTACAVN 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +KA + L A +S+ +AG F A + + ++G Sbjct: 175 KKAAWLTGIPSERMGLFAVLISAVSGAVAGIFIAPVTM--NTYDMGTMLGLKGFCAAMIG 232 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 G+ SL +L + L G+ + F + + + Sbjct: 233 GLGSLWGAFAGGILLGVLESLGAGLISSGSKDAIAFVLLLLILYLCPGGL 282 >gi|295097054|emb|CBK86144.1| L-leucine ABC transporter membrane protein/L-isoleucine ABC transporter membrane protein/L-valine ABC transporter membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 308 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ L++R + + A Sbjct: 129 ----RDVALPSLFNGQWIVGASENFSATITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|297566968|ref|YP_003685940.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] gi|296851417|gb|ADH64432.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] Length = 306 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 105/290 (36%), Gaps = 31/290 (10%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 FA L +++G +GLLS + AY+ +L L + ++ +G Sbjct: 32 FAMALDLLLGYVGLLSFGHAAFWGTSAYTSALLAKAGLP-FPLAVLGGVGVTTLLATAIG 90 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 S++ +G Y A+ TL +++ I + + +T G+ G+ R + Sbjct: 91 FLSIRRQGIYFAMVTLAFAQMVYYIANELRSLTGGENGVQGVPRTLW------------- 137 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 + + YY L + L + R+ + +R+ + +L K Sbjct: 138 --GLDLSNPLAFYYAALPLVALGFFLAWRTVRSPFGHVLIAVREEEARAQALGYPTTRFK 195 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 F +S+ +AG +A + ++ ++ +S + +V+ + ILGG+ +L Sbjct: 196 FLDFLLSAGLSALAGGLYALNHGFVALEVVHWSTSGLVVMMAILGGIGTLW--------- 246 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + L + ++ I LV+L + Sbjct: 247 ------GGLLGAAVVLLLRDWLSAWTDAWGVATGIIFVLVVLGFRQGIWG 290 >gi|91788438|ref|YP_549390.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91697663|gb|ABE44492.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 430 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 113/331 (34%), Gaps = 32/331 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L L+ + ++ Q+ I ++ +I++G G+LS + + Sbjct: 16 FLLWSLFALVLALAPLVFTSSLSHTILSQMGIAIIVCLSYNILLGQGGMLSFGHAVYSGM 75 Query: 77 GAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 G++ I G+ + L+ + S +++G + K G A+ TL + E Sbjct: 76 GSFLAIHTLNKISSGALGVPVSLIPIAGGLASMLVAVVLGWVTTKKSGTTFAMITLGVGE 135 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + + + + G+ G+ + + + ++ +YY++ Sbjct: 136 LIWAMSLMFPEFFGGEGGVS------------GNRVTGAKVWGITYGPQVQLYYLIAAYT 183 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 + +++ RT + +RDN + + + +F V++ F G++G A Sbjct: 184 LVCTALMFAFTRTPLGRMLNAVRDNPERVEFVGYDTQKVRYFSFIVAAFFAGISGGLAAL 243 Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 + + ++ ++ + + LGG T +++ L + Sbjct: 244 NFEIVTSEVVSGYRSGAYLLFTFLGGATFFFGPIIGAVLMVLAFVLLSEFTKAW------ 297 Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + +++ + L Sbjct: 298 ---------LLYLGLIFLFMVMYAPGGVASL 319 >gi|296105145|ref|YP_003615291.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059604|gb|ADF64342.1| branched-chain amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 308 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ L++R + + A Sbjct: 129 ----RDVALPSLFNGQWIVGASENFSASITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|257784624|ref|YP_003179841.1| Monosaccharide-transporting ATPase [Atopobium parvulum DSM 20469] gi|257473131|gb|ACV51250.1| Monosaccharide-transporting ATPase [Atopobium parvulum DSM 20469] Length = 551 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 28/298 (9%), Positives = 81/298 (27%), Gaps = 9/298 (3%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 Y IL + + + + + + ++ Q + A G++ ++ G L+ Sbjct: 228 YIVILLVFIALCIITPAVKGTQLLTYSNVINILQQASPRMFLALGVAGLILLTG-TDLSI 286 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 +G + I+ + + + + + + L ++ Sbjct: 287 GRMVGMGMTASTIIMHQGINTGQVFGITFDLTGVPIPVR--IIMALVTCIVLCTCFTSIA 344 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 F I+ + + + + V P + ++L Sbjct: 345 GFFTAKFKMHPFISTMANMLIIFGIVTYATKGVSFGAIEPSIPDMVIPRIGKFPSIILWA 404 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 A + +T + N +A ++ + AF ++ G Sbjct: 405 IAAIAIVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFRVMVGAFVMAGILYGFGSWLEC 464 Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMN 302 + ++ I+ ++ GG+ +S + I + + Sbjct: 465 MRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVTTGVLIFTALTYALTILG 522 >gi|152972327|ref|YP_001337473.1| branched-chain amino acid transporter permease subunit LivH [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957176|gb|ABR79206.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 308 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALIMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTQGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + S + + ++ L++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSDSFSATITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|223933325|ref|ZP_03625313.1| inner-membrane translocator [Streptococcus suis 89/1591] gi|330833174|ref|YP_004401999.1| inner-membrane translocator [Streptococcus suis ST3] gi|223897975|gb|EEF64348.1| inner-membrane translocator [Streptococcus suis 89/1591] gi|329307397|gb|AEB81813.1| inner-membrane translocator [Streptococcus suis ST3] Length = 295 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 100/303 (33%), Gaps = 19/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + ++ Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLYMMGAFMGYFLLNNLN---FIADGG 61 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++G L ++LA L S ++ + + Sbjct: 62 TRFFVALILAMVGTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFFLE--YTMIKFFTA 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I F V +L L ++ L ++RT + A R + + Sbjct: 120 DVKAFPQAIEAVTFNLGPVSVTNIQLIILGVSLALMVALQLIVKRTKMGKAMRAVSVDSD 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG ++I P M + + +LGG+ Sbjct: 180 AAQLMGINVNRTISFTFALGSALAGAAGVLLGLYYNQIEPLM-GMTPGLKAFVAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + F+ ++ L +++L+R Sbjct: 239 GIIPGAALGGFVIGIIET-------------FTYVIEFDTFRDAIVYTVLIIILLVRPSG 285 Query: 339 LLR 341 +L Sbjct: 286 ILG 288 >gi|322369206|ref|ZP_08043771.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haladaptatus paucihalophilus DX253] gi|320550938|gb|EFW92587.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haladaptatus paucihalophilus DX253] Length = 298 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 91/311 (29%), Gaps = 33/311 (10%) Query: 51 MFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----------------YVILGSRYGLSIW 93 M A GLSI++G+L ++ Y IG Y + L Sbjct: 1 MVAIGLSIILGTLKFVNFAHGALYLIGTYLGLLITLNITISDGKLAEWGYGQVGLDLGFL 60 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + +I G++M + D ++++ ++ + I G A Sbjct: 61 PALVIVPIIVFGVGLLMERFIARPFYDRPDTDQILLTFGLAIVVQEAFKILFGGQSYNFA 120 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 ++ + I+ YV+ L A + L + T R Sbjct: 121 RPAQTSLGSIELQLSGPIDLPLVGTIGIWRLYVIAITAVLVALVYLLIEYTDFGLVVRAG 180 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 + + L I L F V +A G+AG + +V Sbjct: 181 TRDAEMVRLLGVKITRPYLMVFGVGAALAGIAGVVGGTL--YAVNPNIGMEVLVPSFLVV 238 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++GG+ S+ ++ + + + + + +++L Sbjct: 239 VIGGVGSIRGAVVGGILIGLTLSSLVAVAPQWSQVG--------------IYVLAAIILL 284 Query: 334 MRSHSLLRLRT 344 R LL Sbjct: 285 ARPQGLLGSEE 295 >gi|330876828|gb|EGH10977.1| inner-membrane translocator [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963605|gb|EGH63865.1| inner-membrane translocator [Pseudomonas syringae pv. actinidiae str. M302091] Length = 300 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 92/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+IV G +G++++ A+G+Y+ + + L+ +I Sbjct: 14 FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSLVFQRYCPELMGWYFII 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + + +L W + + Sbjct: 74 GIGVAFLVTFAFGFMLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ S + + +++ ++A + L+L R+ R + N+ + Sbjct: 132 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAGVFLFLYRSRWGLRIRAVTQNRAMAGA 191 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AG+ F + + + +V+ GG+ SL Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + +++ R + L Sbjct: 250 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296 Query: 343 R 343 + Sbjct: 297 K 297 >gi|153212871|ref|ZP_01948488.1| ribose transport system permease protein RbsC [Vibrio cholerae 1587] gi|153825735|ref|ZP_01978402.1| ribose transport system permease protein RbsC [Vibrio cholerae MZO-2] gi|153830423|ref|ZP_01983090.1| ribose transport system permease protein RbsC [Vibrio cholerae 623-39] gi|183179638|ref|ZP_02957849.1| ribose transport system permease protein RbsC [Vibrio cholerae MZO-3] gi|262190076|ref|ZP_06048370.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae CT 5369-93] gi|124116249|gb|EAY35069.1| ribose transport system permease protein RbsC [Vibrio cholerae 1587] gi|148874097|gb|EDL72232.1| ribose transport system permease protein RbsC [Vibrio cholerae 623-39] gi|149740574|gb|EDM54685.1| ribose transport system permease protein RbsC [Vibrio cholerae MZO-2] gi|183013049|gb|EDT88349.1| ribose transport system permease protein RbsC [Vibrio cholerae MZO-3] gi|262034041|gb|EEY52487.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae CT 5369-93] Length = 327 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|319763649|ref|YP_004127586.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330824086|ref|YP_004387389.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317118210|gb|ADV00699.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329309458|gb|AEB83873.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 305 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 122/330 (36%), Gaps = 37/330 (11%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + L Y+ S+ + + + A L V+ +G L+ Y +GAY Sbjct: 10 IAAIGCVLLACVALGSGYVGSLMVWMALAAALAASLRFVL-LIGELNFASAAFYGLGAYC 68 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 + + + +S++++ A ++ G +LK +G Y + +E + + + Sbjct: 69 TGTIANTADWPFAATLALSSLLALAVSIVFGGITLKVKGPYFLLIGFAFTEAMRILYTRT 128 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + + G +G+ +L + Y +CF +L Sbjct: 129 EAL-GGNSGLVGIFPPAWLDPYYQ--------------------YFATALCFALILGMLA 167 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + R+ + + IRDN+ S+ + AK++ FA++SA G+ G+ A + + ISP Sbjct: 168 IERSHLGKIFVAIRDNENVVRSVGNRVFLAKVACFAIASAVAGLVGSLHAYANNVISPLD 227 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F F + ++ + +GG S +L+G+ M Sbjct: 228 FGFMLSTFALAYLKVGGEDSPLGPVIGAVLLVGIASWAQSMGGS---------------E 272 Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 L +A+ L +L L+ L Sbjct: 273 HILYGLAIVLSVLFMPKGLMGLLERLRAGR 302 >gi|262403323|ref|ZP_06079883.1| ribose ABC transport system permease protein RbsC [Vibrio sp. RC586] gi|262350822|gb|EEY99955.1| ribose ABC transport system permease protein RbsC [Vibrio sp. RC586] Length = 327 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADNFAWFGTGYALGIPVPVWLMVVVFAGAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|226355572|ref|YP_002785312.1| branched-chain amino acid ABC transporter permease [Deinococcus deserti VCD115] gi|226317562|gb|ACO45558.1| putative branched-chain amino acid ABC transporter, permease component [Deinococcus deserti VCD115] Length = 324 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 104/327 (31%), Gaps = 39/327 (11%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS----- 91 + + +Y +FA G ++V LG+++ + +GAY L + Sbjct: 8 QNTMNGLAIGSVYAIFALGYTLVFSILGIINFAHGAVFTLGAYFTYTLVVGQFENNGLLK 67 Query: 92 -----------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 L + A+++G +++ + + A L + Sbjct: 68 GINLFPDGSPFSGSALSFGLATLIGAVLAGLVAVLIERLAFRPMRARGADPLLALVSSLG 127 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 L+ I G +L + V+ + L + Sbjct: 128 VALVLVNLIQLLVGAEIYNFPSNAYGEVKPALAFQIGDKT--VVIRTVQIIIFLVSLVML 185 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + + RT I A R + +N L ++ L F +S G+AG + Sbjct: 186 AILGYVIGRTKIGKALRAVAENPGTASLLGISVDRFILITFFLSGFLGGLAGTLVGTAFG 245 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ++ F + + +++++LGG+ S+ ++ Sbjct: 246 -VAGPYFGVTYGLKGLAVIVLGGLGSIPGAVLGGLVIGLAEAFV--------------PA 290 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + LF+++L+R LL Sbjct: 291 DYSAYKDAVAFALLFVILLVRPQGLLG 317 >gi|159030125|emb|CAO91017.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 287 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 89/292 (30%), Gaps = 12/292 (4%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + + + + I + A GL++ G L L + +GAY ++ ++ Sbjct: 3 TPQLLFNGLAVGSIIALAAVGLTLTCGILRLSNFAHGDFMTLGAYITWLVNAQGINLWLA 62 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 + +A+ + A + L R TLI+ I + ++ + D Sbjct: 63 MPVGAAVTAIAMLIAERLLWKPMRDRRADSTTLIIISIGLALFLRNGILMIWGGSNQRYD 122 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 T + V+ + ++ L++T I A R + Sbjct: 123 LPVMTAT-----------EIFGIKVAFDRLLVIGLAIIVIIALHFLLQKTKIGKAMRAVA 171 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 D+ + + + ++ +AG F + + + + + VI Sbjct: 172 DSNDLARVTGINVEWVVFWTWIITGVLTALAGGMFGLITGGV-RPNMGWFLILPMFAAVI 230 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 LGG+ + I+ E+ + + + + + Sbjct: 231 LGGIGNPYGAIAGALIIGVAQEISVPLIGSDYKLAVALLIMILLLLFRPQGL 282 >gi|311109814|ref|YP_003982665.1| inner-membrane translocator 75 [Achromobacter xylosoxidans A8] gi|310764503|gb|ADP19950.1| inner-membrane translocator 75 [Achromobacter xylosoxidans A8] Length = 314 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 117/328 (35%), Gaps = 37/328 (11%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L AVV L+ L + S+ + + + V+ V +G L+ Sbjct: 5 LLTPAVVSVGLVALAASLLQGGGLAASLVLWLAVNVLITASFRFVT-LIGELNFAVAGFV 63 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY + + + + SA+ +G ++ G +L+ +G Y + + +E+ + Sbjct: 64 GLGAYMAGVGSVSFNWPFLVTLAASAVFAGLISLVFGYITLRAKGPYFMLISFAFTEVIR 123 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I K + I G +G+ +L +++ + Sbjct: 124 MIYTKTEAI-GGSSGMVGIFPPSYLDGYFP--------------------ALVVAVVLAL 162 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + ++ ++ IR+N ++ + K+ VSS G+AGA A S + Sbjct: 163 LWALWFIEKSDFGKVLVAIRNNDALVETVGINVHLTKVLCLGVSSFVAGIAGALLAYSNN 222 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISP F F + ++ + +GG + + +L + +F Sbjct: 223 VISPGDFGFLLAVYALAYLKVGGESHILGAVVGAIVLTLL---------------GQFAL 267 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 SF A+ + +L+ L+ L Sbjct: 268 SFGPYEHIFYGAAIVISVLLMPGGLIGL 295 >gi|239623304|ref|ZP_04666335.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522270|gb|EEQ62136.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 333 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 90/313 (28%), Gaps = 26/313 (8%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + I + +Y + A G++++ G + +++ +G Y + G Sbjct: 45 WYFTQNIFNGIFAGGVYALIAVGITVIYGVMRMINFASGAYLMVGMYITYFGYTLTGWDA 104 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 +LLIP + ++S A ++ + +I++ + G Sbjct: 105 YLLIPFTVLVSAAVAWASFKLTISPILNRDKTTAIIVTVGLSFFFQNLVILIFGAN---- 160 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 T+ + I+ I + L + L +T A R Sbjct: 161 -------PLTIPTEIQLKSLMIGPFIINLPRLIAFAASMALVLIFHILLNKTMFGQAIRA 213 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 +N + L A+ + +AG S F + Sbjct: 214 TSENVEVSEMLGVNTRNMFAIAWVLGIVLTSIAGLLLTPIYAIQSSTGATFRTTG--LMA 271 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V+LGG+ + + +L + L SL + + L LV+ Sbjct: 272 VVLGGLGDIRGAFLSGILLGVIEALVASYIDTNMGSLG-------------IFVLLLLVL 318 Query: 333 LMRSHSLLRLRTP 345 R L Sbjct: 319 YARPAGLFGKGER 331 >gi|84500966|ref|ZP_00999201.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] gi|84391033|gb|EAQ03451.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola batsensis HTCC2597] Length = 337 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/334 (9%), Positives = 85/334 (25%), Gaps = 19/334 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 L + I + A G++++ G L + A G + ++ Sbjct: 4 MLNALVALANFVIVPALAYGSQLALGALGVTMIYGILRFSNFAHGDTMAFGTMAVILFTW 63 Query: 87 RYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + +A+++ G+++ + + Y+ ++I + Sbjct: 64 LFQSWGISFGPLPTALLALPFGIVICMALVLLTDRYVYAFYRAQKVKPVVLVIVSMGVMF 123 Query: 146 GKAGIYVADRLYFLGTTVRSLIRF--------FRFPSSFVIYEIFMYYVLLGMCFLSASI 197 G+ + + L+ A + Sbjct: 124 VTNGLVRLIIGPDDQRFSDGERFLISARDFKEMTGLDEGLAIKTGQALTLVVAIIAVALL 183 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L RT + R DN+ + + + + +AG + + Sbjct: 184 FWFLNRTRTGKSMRAYSDNEDLALLSGINPEKVVMVTWLIVATLATLAGTLYGLDKSF-- 241 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309 F + + I+GG+ ++ + + Sbjct: 242 KPFTYFQLLLPFFAAAIVGGLGHPLGAIVGGFVIAFSEVTITYAWKKVLTYSVPESWAPD 301 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L +V+L R L + + Sbjct: 302 GLVQLLSTDYKFAVSFVILLVVLLFRPTGLFKGK 335 >gi|300311946|ref|YP_003776038.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300074731|gb|ADJ64130.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 293 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 95/303 (31%), Gaps = 17/303 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + ++ A GL+I+ G +G++++ IGAY +L L P Sbjct: 5 NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTIGAYITYLLSHLTTTYAPALQPFYF 64 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++ + L + + + +L W + + Sbjct: 65 FVAIVLSFAVAYGVGYLTE--LLLISRLYKRPLDTLLATWGLSLAMQQTFRSIFGAKEVS 122 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 T+ + P+ + + +++ L+ +I + L R+ R N+ Sbjct: 123 ATLPDWLMGSFKPTDDIDIPLNGLFMMGLTVLLTGAIFVLLFRSRWGLQVRATMQNRVMS 182 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + FA+ G+AGA A + + + +V+ GG S Sbjct: 183 GAVGINTRKVDRTTFALGCGVAGVAGA--AFTTIGSTGPTSGSLYIVDTFLVVVFGGAQS 240 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + + +L A+ L++++R L Sbjct: 241 LIGTIASAFSIAQTQSTAEFFLTGSMAKVLTLS-------------AVILILMLRPQGLF 287 Query: 341 RLR 343 ++ Sbjct: 288 SVK 290 >gi|294651936|ref|ZP_06729225.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] gi|292822168|gb|EFF81082.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] Length = 356 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 95/325 (29%), Gaps = 27/325 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---- 86 A Y ++ +I+ + A L +V G G+LSL + +A+G Y++ + Sbjct: 37 SAFYLSAYWVTLIGKIMCLALVALALDLVWGYAGILSLGHGLYFALGGYAFGMYLMRQSA 96 Query: 87 ------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNIL 137 W +P + M L L + + Sbjct: 97 GDGLPDFMRFLSWTELPWYWTGTEHILWAMALVILVPGIVAFIFGFFAFRSKIKGVYFSI 156 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + + + F + + ++ + L Sbjct: 157 ITQAMVFAAALLFFRNETGFGGNNGFTGFKTLLGFDITSAPMRATLCFITALVLMLCFIG 216 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L IRD++ L ++ KLSA+ +S+ G+AGA + I+ Sbjct: 217 LRQLMNRPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVIAGIAGALYVPQVGIIN 276 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P +I + V GG +L ++ F + Sbjct: 277 PSEMNPVNSIEMAVWVAAGGRGTLIGPILGAGLINAAKTY--------------FTVAAP 322 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 ++ +V L ++ L Sbjct: 323 EAWLLILGALFIVVTLFLPKGVIGL 347 >gi|225389472|ref|ZP_03759196.1| hypothetical protein CLOSTASPAR_03220 [Clostridium asparagiforme DSM 15981] gi|225044466|gb|EEG54712.1| hypothetical protein CLOSTASPAR_03220 [Clostridium asparagiforme DSM 15981] Length = 291 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 105/305 (34%), Gaps = 25/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + Q +IY + A G S +VG GL++ IGA++ +G + + Sbjct: 7 ILNGVCQGMIYALMAIGYSTIVGVTGLVTFAYGEVVMIGAFAAYYCFEFFGAHLVPALLA 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++G G+++ + D +LI + +L I G Sbjct: 67 GFLMAGLGGVVIHKVCYEHFFDAPRHISLICTIGMSMLLKNLAQILFGSQ---------- 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + + LSA++ ++L RT R++ ++K Sbjct: 117 -VKGMPTFFGGRFISLGGIRISFLQLLIFGLVIGLSAALSIFLNRTRTGMTLRSVSQDKK 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + L+ + A G+ G I P M + + S +LGG+ Sbjct: 176 AAALVGIDVERSTLTGNVLGCALGGVGGVLLGIYYGTIVPTMGG-TVGMKAFSASVLGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 T ++ A ++ + + + L LV+L++ Sbjct: 235 TDVAGAAIGGLLIGICENI-------------GIMFMTTGLRDAIAFVFLILVLLVKPQG 281 Query: 339 LLRLR 343 L + Sbjct: 282 LFGRK 286 >gi|239814755|ref|YP_002943665.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239801332|gb|ACS18399.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 328 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 115/306 (37%), Gaps = 19/306 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 LR ++ + + V L FL + + +I I +FA L +++G G+ Sbjct: 12 LRKARWRPLEFVAWAVAFALPFLMPSHSL-------LVNEIAIVALFAMSLDLILGYTGI 64 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 +SL + GAY+ + + + V+A++S G+I + L+ + Sbjct: 65 VSLGHAAFFGFGAYAAALFAKLVMPDPTVGLVVAAVLSAMLGLIASVTILRGSDLTRLMV 124 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL + + + K +T G G+ LG +F +Y + Sbjct: 125 TLGTALLLLELANKLDWLTGGADGLQGVVMGPVLGL------------FAFDLYGRTAAW 172 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 L + L + + + + IRDN+ ++ ++ + + V++ G A Sbjct: 173 YSLTVMLLLFLAMRRIVHSPFGATLKAIRDNRLRAMAIGIPVVSRVVVIYTVAAGIAGAA 232 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA A + S D+ F + V+ ++++GG+ L + + + Y Sbjct: 233 GALLAQTTGFASLDVLAFDRSADVLLMLVIGGVGWLYGGVAGAIVFKLLQNWLSAVTPQY 292 Query: 306 FNSLLK 311 + + Sbjct: 293 WMFWIG 298 >gi|217978235|ref|YP_002362382.1| inner-membrane translocator [Methylocella silvestris BL2] gi|217503611|gb|ACK51020.1| inner-membrane translocator [Methylocella silvestris BL2] Length = 305 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 95/313 (30%), Gaps = 30/313 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89 + + IY + A G ++V G +G+++ + + A+ + ++ + Sbjct: 8 LINGVTLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFMLSAFIALILFLALTQLLGLTSVA 67 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + +++ ++ ++ + + +A LI + L + G Sbjct: 68 FAFVIVLFAGMALTSLWAFVIERIAYRRLRGSFRLAPLISAIGMSIFLSNLVYVLQGPRN 127 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + +IR + V + ++ L A +++T+ A Sbjct: 128 KALPP-------MFNDVIRLSEGGAYDVTLSVKQIMIVSVTAVLLAGFWFIVQKTSFGRA 180 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + + L + F + +A +AG + I+ F + Sbjct: 181 QRACEQDGRMAALLGVDVDRTISLTFVIGAALAAVAGVLYIVYYGVIN-SGDGFVPGVKA 239 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + +LGG+ SL ++ V + + F L Sbjct: 240 FTAAVLGGVGSLPGAVLGGLLIGLVETFWAAYFSSDYKDVAAFS-------------ILV 286 Query: 330 LVILMRSHSLLRL 342 + ++ L Sbjct: 287 VTLIFMPSGLFGR 299 >gi|124263100|ref|YP_001023570.1| putative branched-chain amino acid transport system permease [Methylibium petroleiphilum PM1] gi|124262346|gb|ABM97335.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Methylibium petroleiphilum PM1] Length = 310 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 97/309 (31%), Gaps = 16/309 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + ++Y + A G ++ + G+ + A + + + + Sbjct: 9 LIGGLMSGMLYSLVALGFVLIFKASGVFNFAQGAMVLFAALAMARFAEWIPSLLGIHSRL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT----NGKAGIYVAD 154 A + I + ++ + L + L+ E ++ G++ Sbjct: 69 VANVLAFAAAIAVMVAVARAVERLCLRQLVNQEGVTLLMATLGIAHFLDGFGQSLFGSDI 128 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 +G L ++ Y L A + L+ ++T+ A R + Sbjct: 129 YTIDVGLPKDPLTVLESTLQGGLLISKEDLYAAAIATALVALLALFFQKTSTGRALRAVA 188 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 D+ +A S+ + + ++V+ +AG + + + + +VI Sbjct: 189 DDHQATQSIGIPLDRIWVIVWSVAGFVALVAGVIWGSKLGVQFSLS---LVALKALPVVI 245 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 LGG+TS+ I+ +L ++ + + +L+ Sbjct: 246 LGGLTSVPGAIVGGLIIGMGEKLSEVYLGPALGGGIEIWFA---------YALALVFLLL 296 Query: 335 RSHSLLRLR 343 R L + Sbjct: 297 RPQGLFGEK 305 >gi|254702466|ref|ZP_05164294.1| inner-membrane translocator [Brucella suis bv. 3 str. 686] gi|261753034|ref|ZP_05996743.1| inner-membrane translocator [Brucella suis bv. 3 str. 686] gi|261742787|gb|EEY30713.1| inner-membrane translocator [Brucella suis bv. 3 str. 686] Length = 406 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 103/311 (33%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +YY+ L S + L T Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLPFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|220910439|ref|YP_002485750.1| inner-membrane translocator [Cyanothece sp. PCC 7425] gi|219867050|gb|ACL47389.1| inner-membrane translocator [Cyanothece sp. PCC 7425] Length = 322 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 101/325 (31%), Gaps = 37/325 (11%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82 + +Y +FA G +++ LG+++ + +GAY Sbjct: 10 FLNGLSIGSVYALFALGYTLIFSILGIINFAHGAIFTLGAYFTYALMGGAFGFSGLLASL 69 Query: 83 ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + G L + +S+ ++G G+ + + + + L + ++ Sbjct: 70 RLPLLDGLPVELRFLVATLLSSCLAGLVGVGIERIAFRPLRQRGSDPLLSVVSSLGVAVV 129 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 I LG F + + + + + Sbjct: 130 VVNLIQYLVGAENYTFPANALGN--LPAALNFGSVAEPIPIRTVQVVIFAVAVVILILLT 187 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + T A R I ++ L I + F +SS G+AG S I+ Sbjct: 188 YLINATRFGKAMRAIAEDATTASLLGINIDRYIVFTFFLSSFLAGLAGTLVGVSV-SIAG 246 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F + + +++++LGG+ S+ +L + ++ Sbjct: 247 PYFGIAFGLKGLAVIVLGGLGSIPGAVVGGLVLGIIEAFV--------------PADYSA 292 Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343 L LFL++L+R LL + Sbjct: 293 YRDALAFGILFLMLLVRPQGLLGRK 317 >gi|170721345|ref|YP_001749033.1| inner-membrane translocator [Pseudomonas putida W619] gi|169759348|gb|ACA72664.1| inner-membrane translocator [Pseudomonas putida W619] Length = 289 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 95/305 (31%), Gaps = 26/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S +Y + A G + ++ A +GA L +G +WL +P Sbjct: 6 LVSGLGLGSMYALLALGFHLTYAVSRTVNFAQGSAMMVGAVLGYSLAVTWGWPLWLALPT 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+ + ++ + A L+ + +L T G Sbjct: 66 TLVLCAVLGLAIERFLVRPFHARGSDAWLMATVAGGLLLDNLAMFTFG-----------K 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S + R + L ++A++ RRT + N + Sbjct: 115 EPRQFGSALTSLRLDLGDSSLNAVQLAIPLAGAAVAATLYWVRRRTQLGLRLEACVQNPR 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + +AFA+S+ F +AG A + ++ ILGG+ Sbjct: 175 AARLMGIEVNRVVAAAFALSTVFAALAGLLIAPLYSV--HADMGTLFGLKAFAVAILGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S + A + + + F LL F + +V+ R Sbjct: 233 ASAGGVFAAGLLFGLLEAVVTLYFGSAFTQLLCF-------------ALVIVVLAARPDG 279 Query: 339 LLRLR 343 L + Sbjct: 280 LFGRK 284 >gi|226953360|ref|ZP_03823824.1| branched chain amino acid ABC transporter permease [Acinetobacter sp. ATCC 27244] gi|226835898|gb|EEH68281.1| branched chain amino acid ABC transporter permease [Acinetobacter sp. ATCC 27244] Length = 356 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 95/325 (29%), Gaps = 27/325 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---- 86 A Y ++ +I+ + A L +V G G+LSL + +A+G Y++ + Sbjct: 37 SAFYLSAYWVTLIGKIMCLALVALALDLVWGYAGILSLGHGLYFALGGYAFGMYLMRQSA 96 Query: 87 ------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNIL 137 W +P + M L L + + Sbjct: 97 GDGLPDFMRFLSWTELPWYWTGTEHILWAMALVILVPGIVAFIFGFFAFRSKIKGVYFSI 156 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + + + F + + +V + L Sbjct: 157 ITQAMVFAAALLFFRNETGFGGNNGFTGFKTLLGFDITSAPMRATLCFVTALVLMLCFIG 216 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L IRD++ L ++ KLSA+ +S+ G+AGA + I+ Sbjct: 217 LRQLMNRPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVIAGIAGALYVPQVGIIN 276 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P +I + V GG +L ++ F + Sbjct: 277 PSEMNPVNSIEMAVWVAAGGRGTLIGPILGAGLINAAKTY--------------FTVAAP 322 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 ++ +V L ++ L Sbjct: 323 EAWLLILGALFIVVTLFLPKGVIGL 347 >gi|83311701|ref|YP_421965.1| branched chain amino acid ABC transporter [Magnetospirillum magneticum AMB-1] gi|82946542|dbj|BAE51406.1| Branched-chain amino acid ABC-type transport system [Magnetospirillum magneticum AMB-1] Length = 291 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 98/293 (33%), Gaps = 13/293 (4%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 + + + S + Y + A GL++V G++ +++L +GAY + GL Sbjct: 4 LTLQSLFSGVLSGAYYALIALGLALVFGTMRVINLAHGELVLLGAYISYTAEEKLGLDPL 63 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 +P++ + +++ + D + +LI++ IL + Sbjct: 64 ASLPLALAVVVGTAILVYYLVSLIKKDR-ELNSLILTFGIGVILTNAVLMIWSADIHSAT 122 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 Y T + + + F + I + ++ WL ++ A R + Sbjct: 123 TPWYHDATILFDTLFAMQAELVFAGFGIALV----------GAVWWWLEKSWYGRALRAV 172 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 N+ A + ++ +FAVS +AG A ++ + I Sbjct: 173 ASNRDAAKLMGVNPQLTEILSFAVSGVLATVAGI--AIYTAKVIQPAMGHHLTVKAFIIT 230 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 +L GM S+ + +L V L M L + + Sbjct: 231 VLAGMGSVPGVLLGAVLLGIVESLTVTMASSALQELAGMVLFLVVLLLMPSGL 283 >gi|84385760|ref|ZP_00988790.1| ribose ABC transporter, permease protein [Vibrio splendidus 12B01] gi|84379076|gb|EAP95929.1| ribose ABC transporter, permease protein [Vibrio splendidus 12B01] Length = 328 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 31/312 (9%), Positives = 87/312 (27%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q I + A G+++V+ + G + L+ A Sbjct: 30 LIALIFLIVVVSFLNPNFFTVDNILNILRQTSINAIIAVGMTLVILTAG-IDLSVGSVLA 88 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + + + + + F Sbjct: 89 LCGAFAASMIGMEIPVMIAVPTALVAGAALGAISGVIIAK------------GKVQAFIA 136 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F Y + + + M + A Sbjct: 137 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFG-----TGYAMGIPVPVWIMAVVFA 191 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ L T + N+ A + K+ +A+ +AG A+ Sbjct: 192 AVWYLLNHTRFGRYVYALGGNESATRLSGIDVDKVKIGVYAICGLLAAVAGIIVASRLSS 251 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V + GG + I+ + ++ + ++ Sbjct: 252 AQPTAGMGYELDAIAAVVLGGTSLAGGRGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 311 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 312 AKAVVILLAVLV 323 >gi|170741801|ref|YP_001770456.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168196075|gb|ACA18022.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 334 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 111/289 (38%), Gaps = 14/289 (4%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 ++ + ++LI+ + A L +V+G GL+S IGA + IL + Sbjct: 40 VPPAAQALGLPFLTATATRMLIFGLAALSLDLVLGLGGLVSFGHAAFLGIGATALGILDA 99 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + L +P + G ++ G +L+ RG Y + TL ++ + + G Sbjct: 100 HGLRDLALQVPAAVASCGLFALVTGAIALRTRGVYFIMITLAFGQMAYFLAVSLAA-YGG 158 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 G+ ++ R G + ++Y L + + + + + Sbjct: 159 DDGMALSRRSTLFGRPLLDGDE-------------ALFYAALAVMAGALLGLRRVAGSRF 205 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R RDN ++ +L+A+ ++ A G+AG A + +SP + + Sbjct: 206 GRVLRGTRDNPTRMEAIGFPAFPYRLTAYGLAGALAGLAGVLLANQAEFVSPAYMSWQRS 265 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +I +V+LGG +L A LI + E+ + ++ L + Sbjct: 266 GELIVMVVLGGRGTLVGPVVGAAALIALEEVLARHSEHWRLGLGLILVA 314 >gi|39998483|ref|NP_954434.1| branched-chain amino acid ABC transporter permease [Geobacter sulfurreducens PCA] gi|39985430|gb|AAR36784.1| branched-chain amino acid ABC transporter, permease protein [Geobacter sulfurreducens PCA] gi|298507428|gb|ADI86151.1| branched-chain amino acid ABC transporter, membrane protein [Geobacter sulfurreducens KN400] Length = 291 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 99/305 (32%), Gaps = 24/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G + L++ + GA+ +++ + + ++I++ + + Sbjct: 6 LINGIALGSTYALIALGYTMVYGIIALINFAHGEIFMAGAFVGLLMVAVFKMNIFVAMIL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G+++ L + + ++ LI + L + G Sbjct: 66 AMATCMVMGVVIELIAYRPLRKSSRLSALISAIGVSIFLSTLALMIFGADAKGFP----- 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ L + +++T I A R ++ Sbjct: 121 -----DTAFPVRQVKVLGAEISTLQLLIIGVSALLMLGLEFIVQKTKIGKAMRATSEDYN 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ S+ G + +S +M + S +LGG+ Sbjct: 176 TAALMGINVNRVISFTFALGSSLAAAGGVLVGLLFNAVSFNM-GLMAGLKAFSAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ G ++ ++ + L LV+L++ Sbjct: 235 GSIPGAML-------------GGLLLGVAEVMGVAAGYSSYRDAIAFAILVLVLLVKPTG 281 Query: 339 LLRLR 343 LL + Sbjct: 282 LLGQK 286 >gi|206901669|ref|YP_002250650.1| branched-chain amino acid ABC transporter, permease protein [Dictyoglomus thermophilum H-6-12] gi|206740772|gb|ACI19830.1| branched-chain amino acid ABC transporter, permease protein [Dictyoglomus thermophilum H-6-12] Length = 293 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 99/303 (32%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G L L++ Y +GA+ + + + + V Sbjct: 9 IINGISLGSIYALIALGYTMVYGILRLINFAHGDIYMLGAFIGFFALGSWDMPFAIGLIV 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ G+++ + K + I+ LI + +L + G Sbjct: 69 AMLLTAIIGILVEKLAYKPLRNAPRISLLITAIGVSFLLENIMVLLVGAT---------- 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + +I +L FL + + +T I A R + +++ Sbjct: 119 -PRAFPQKIPTEVYLIGNIIVTNKQIIILSVSIFLMLFLQFVVNKTKIGRAMRAVSQDKE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L I FA+ SA G ++I P M + +LGG+ Sbjct: 178 MAQMLGVNIDNVISFTFALGSALAAAGGVLVGMYFNKIEPYM-GIMPGLKAFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + I+ L + F I L +++L++ Sbjct: 237 GIIPGAMLGGFIMGIAEVLVSAFISSTIRDAIAF-------------IILIVILLVKPTG 283 Query: 339 LLR 341 +L Sbjct: 284 ILG 286 >gi|319796033|ref|YP_004157673.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315598496|gb|ADU39562.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 414 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 115/308 (37%), Gaps = 34/308 (11%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IQ+LI +FA +++ G G+LS + +GA+ V + G + L P+ Sbjct: 26 LLNAAIQMLIAALFASAYNLLCGQAGMLSFGHAAYFGVGAFGTVHAMNAIGGAGLLPTPL 85 Query: 99 SAMISGACGMIM----GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 + ACG++ G + K G Y A+ TL ++E+ ++ K + G+AG+ Sbjct: 86 MPLAGAACGLVFGGIAGWFATKRTGTYFAMITLAIAELVHSLAPHLKGLFGGEAGVSTMR 145 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + + +YY+ L LS ++ RT + +R Sbjct: 146 MPAWGLDFGSTTQ---------------VYYLTLAWVLLSVLLLYLFTRTPMGRLAYGLR 190 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 +N L + + FA+S+ F G+AG S + + +F + + V+ Sbjct: 191 ENSHRLRFLGYNVHGLGMLVFAISAMFSGIAGGLQVVSNESANYVVFDPALSAAVVLNTY 250 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG+ A A++ + + I LV++ Sbjct: 251 IGGVKVFLGPAFGAALMTFFGYAVSDLTQSW---------------LLYQGILFVLVMMF 295 Query: 335 RSHSLLRL 342 L L Sbjct: 296 MPSGLAGL 303 >gi|116694455|ref|YP_728666.1| ABC-type transporter, permease component [Ralstonia eutropha H16] gi|113528954|emb|CAJ95301.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 338 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 137/323 (42%), Gaps = 16/323 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+Y ++L L A + Y + +++ + +FA ++++G GLLS + Y Sbjct: 24 VMYGVVLACLLAAPLAGAYPVFVL-KVMCFALFACAFNLLIGYTGLLSFGHAAFFGGAGY 82 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + +G++ + + + G ++G +++ +G Y ++ TL ++++ I ++ Sbjct: 83 AAGHAMKVWGVTPEIGLILGTGAGALIGYVVGSLAIRRQGIYFSMITLALAQMLFFICLQ 142 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G+ G+ R F + ++ +YYV L + + ++I+ Sbjct: 143 AP-FTGGEDGLQGIPR-------------GKLFGVLPLSDDLTLYYVALAIIVAAFALIV 188 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + I++N+ SL + KL+AF +S+A G+AG+ A + Sbjct: 189 RTVHSPFGQILKAIKENEPRAVSLGYDVDRFKLTAFVLSAALSGLAGSIKALVLGFETLT 248 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318 +S + +VI + +LGG+ +L+ ++I + + Y + + + Sbjct: 249 DVHWSMSGMVILMTLLGGLGTLTGPIVGAFVVIALENKLGELGSYLAAVTDIDWFNGLGE 308 Query: 319 RHTTLMVIALFLVILMRSHSLLR 341 + + I + +L ++ Sbjct: 309 SVSMVTGIIFIVCVLTFRKGIVG 331 >gi|121608870|ref|YP_996677.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121553510|gb|ABM57659.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 326 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 64/329 (19%), Positives = 126/329 (38%), Gaps = 29/329 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + +L + + + L + A +I+ G G S + + Sbjct: 8 LAGIALFAVLVGCVPLLTRSGAMLHFVMMALYATLIAQAWNILGGFGGQFSFGHALFFGT 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQ 134 GAY I + G++ W +P++ S G+++G P+ +G Y A+ TL +E+ + Sbjct: 68 GAYIQAIAQLQGGINPWAALPMAMAGSALVGLLVGAPTFRCGLKGSYFALVTLAFAEVSR 127 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + T G G+ + R S +V L M + Sbjct: 128 IVALS-VSFTGGGVGLMLPLRESAGNLQFASR--------------AGYLWVALAMVVGA 172 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + WLR + +RD++ A ++ + KL+A ++S+AF+G AGAF+ Sbjct: 173 LLVTWWLRNGRFGACLQAVRDDEDAARAVGVNPLRVKLAAISLSAAFMGAAGAFYLQVFQ 232 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I P + + ++ + I+GGM +L A+L + +L + Sbjct: 233 YIDPGIAYGPATSVEALVGAIVGGMGTLWGPVLGAAVLHLLSDLTRNLFGAL-------- 284 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + AL L+++ + L Sbjct: 285 ---PGINMVIYGSALVLIVIFLPRGVAGL 310 >gi|329915396|ref|ZP_08276252.1| Urea ABC transporter, permease protein UrtB [Oxalobacteraceae bacterium IMCC9480] gi|327544932|gb|EGF30280.1| Urea ABC transporter, permease protein UrtB [Oxalobacteraceae bacterium IMCC9480] Length = 305 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 92/303 (30%), Gaps = 17/303 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + ++ A GL+I+ G +G++++ IGAY +L + P Sbjct: 17 NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTIGAYMTYLLSTLTTKYAPAFQPYYF 76 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++ + + + + +L W + + Sbjct: 77 FLAIVLSFLAAYGVGYLTER--LMISRLYKRPLDTLLATWGLSLLMQQTFRSIFGAKEVS 134 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 T+ + P+ + I +++ ++ I L L R+ R N+ Sbjct: 135 ATLPDWLMGSFKPTDSIDIPINGAFMMGLTVVMTGGIFLLLFRSRWGLQVRATMQNRLMS 194 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + FA+ G+AG+ A + + + +V+ GG S Sbjct: 195 GAVGINTRKVDRTTFALGCGVAGVAGS--AFTTIGSTGPTSGSLYIVDTFLVVVFGGAQS 252 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + + +L A+ ++++MR L Sbjct: 253 LIGTIASAFSIAQTQSTAEFFLSGSMAKVLTLS-------------AVIVILMMRPQGLF 299 Query: 341 RLR 343 + Sbjct: 300 SSK 302 >gi|325291511|ref|YP_004277375.1| sugar ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325059364|gb|ADY63055.1| sugar ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 360 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 93/313 (29%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + G S + + Q+ I + S+V+ + G + L+ Sbjct: 52 LIVLVLSLAVFGMTLGGKFFSAFSLTLILQQVAIVGIVGAAQSLVILTAG-IDLSVGAIM 110 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYGL L I + CG I G+ + R + + + Sbjct: 111 VLSSVVMGQFTFRYGLPAELSIICGLAVGAFCGFINGVLVSRMRLPPFIVTLGMWQIVLA 170 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + T I + F ++ I Y ++ M L Sbjct: 171 TNFLYSANETIRSQDIVQQAPILQF------------FGNNVRIGSAVFTYGVIAMVLLV 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + L RTA + D+ A + + + +S AG Sbjct: 219 ALLWYVLNRTAWGRHLYAVGDDPDAAELAGVNVKRMLTTVYTLSGLICAFAGWALIGRIG 278 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP +F+ + ++VI GG S+ + I+ + + Sbjct: 279 SVSPTAGQFANIESITAVVIGGISLFGGRGSIMGMIFGALIVGVFSLGLRLIGTDPQWTY 338 Query: 310 LKFDCSFNMRHTT 322 L + Sbjct: 339 LLIGVLIILAVAI 351 >gi|317126301|ref|YP_004100413.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Intrasporangium calvum DSM 43043] gi|315590389|gb|ADU49686.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Intrasporangium calvum DSM 43043] Length = 355 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 132/326 (40%), Gaps = 10/326 (3%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILG 85 + + + + + + A GL+++ G G LSL A+GAY+ + Sbjct: 35 IVVVIETAGSFRQGQLSSMAYLAIAAGGLTVLTGQSGQLSLGHGALMAVGAYTTALLLQS 94 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + +++ ++ +++ G+ +G+P+ + G Y+A ATL ++ + + + Sbjct: 95 RAGAPPLVVVLAIATVVTLVVGVAVGIPAARLHGPYIAGATLSLAVAVPGVALYFSEQLG 154 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G+ G+ + + F + ++ YV L+ ++ L + Sbjct: 155 GEQGLTLRVPEAPVWLLDT----MFFITGQELTGRKYVAYVAWFCLVLTYLLLANLGASR 210 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + WR +RD++ A + A++ AF VS+A G+AGA A +P F + Sbjct: 211 VGRRWRAVRDDEVAAAIAGINLGRARVLAFVVSAAAAGLAGAVMALVVRVSAPSGFTLTL 270 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 ++ ++S ++LGG+ SL AIL + ++ + D + Sbjct: 271 SLGLLSAIVLGGLGSLLGALIGAAILTFLPQVVTSIG----QDAGLSDLQAAELAPLVYG 326 Query: 326 IALFLVILMRSHSLLRLRTPSNFLER 351 + + LVIL+ L+ R Sbjct: 327 LTVILVILLAPAGLVGTIRSGLAHRR 352 >gi|292655063|ref|YP_003534960.1| putative branched-chain amino acids ABC transporter permease [Haloferax volcanii DS2] gi|291372311|gb|ADE04538.1| ABC-type transport system permease protein (probable substrate branched-chain amino acids) [Haloferax volcanii DS2] Length = 322 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 97/325 (29%), Gaps = 35/325 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----------------Y 81 + + Q IYV+ A GLSI++G+L ++ Y +G Y+ + Sbjct: 11 LLNGLQQGAIYVLLAVGLSIILGTLKFVNFAHGALYLVGTYAGLFVALNVPLSNGKLAEW 70 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 + + + G++M + D ++++ ++ + Sbjct: 71 GFSSFGLDIGFLAALLFVPLFVFGVGLLMERYLARAFYDRPDTDQILVTFGLAIVVQELF 130 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI--YEIFMYYVLLGMCFLSASIIL 199 + G + L + I + ++ + + +V+ L A + L Sbjct: 131 RVLFGSNSLPFEQPERILSVGSFAGIPVSGPIALPIVGNFPQWRLWVIGITAVLVALVYL 190 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + T R + + L I + F + +A G+AG + Sbjct: 191 LVEYTDFGLVVRAGTRDAEMVRLLGIKITRPYIVVFGIGAALAGVAGVVGGPL--NVVNP 248 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + + V++GG+ S++ + + Sbjct: 249 TIGTNILVPAFLTVVIGGVGSIAGAVVGGIVFGLTTAALVSFAPAWSQVG---------- 298 Query: 320 HTTLMVIALFLVILMRSHSLLRLRT 344 + +V+L R LL Sbjct: 299 ----LYAIAAIVLLTRPQGLLGDEE 319 >gi|27366522|ref|NP_762049.1| ribose ABC transporter permease [Vibrio vulnificus CMCP6] gi|27358088|gb|AAO07039.1| Ribose ABC transport system, permease protein RbsC [Vibrio vulnificus CMCP6] Length = 328 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 32/312 (10%), Positives = 97/312 (31%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 30 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 88 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + ++ + +++ +P + + G I G+ K + + M+ Sbjct: 89 LCG-AFAASLVAMEVPVFIAVPTALLAGATLGAISGIIIAKGKVQAFIATLVTMT----- 142 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G +Y R G T + + + + ++ +++ Sbjct: 143 -------LLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWY 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + T + N+ A + K+ +A+ +AG + Sbjct: 196 LL----NHTRFGRYVYALGGNESATRLSGINVDKVKIGVYAICGLLAALAGIIVTSRLSS 251 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 252 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 311 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 312 AKAAVILLAVMV 323 >gi|327395601|dbj|BAK13023.1| high-affinity branched-chain amino acid transport system permease protein LivH [Pantoea ananatis AJ13355] Length = 308 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y ++ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMVIAALMMMGIDTSWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 +I+ + I I + R Sbjct: 72 MIAAGFVMAVIISSAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ L++R + + A R ++ Sbjct: 132 ALPSLITGQWTLGESNGFAATLSTMQLVIWVVTFLTMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +AG I+P F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSINPF-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|284045418|ref|YP_003395758.1| inner-membrane translocator [Conexibacter woesei DSM 14684] gi|283949639|gb|ADB52383.1| inner-membrane translocator [Conexibacter woesei DSM 14684] Length = 382 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 100/335 (29%), Gaps = 25/335 (7%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + I + +L L G + + IY + A GL++V G L L++ Sbjct: 71 RPAAIAATVVGNVAAVLILDYGLHDVAQRGLNGLSLGAIYALGAVGLTLVYGILRLVNFA 130 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 +GAY ++ +GL + + V+ +++ A + + A ++ Sbjct: 131 HGDLLTLGAYVAYVVNVSWGLPLVAGVVVAIVVTAAFSVALERAMWAPMRARGAGMLQLL 190 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + Y + + + VLL Sbjct: 191 IMAIGLAFVI----------RYGIQFAWGTELRQLRVDSSAAVSFLGLRIGRTQLIVLLV 240 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L L+RT + R + D++ + + + + A G+AG F Sbjct: 241 GVAALLATGLMLKRTLLGKRMRALSDSRDLAETSGIDTSRVIMWTWIFAGALAGLAGVFA 300 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A F + + + V+LGG+ + A +L V+E + + Sbjct: 301 GAVTQL--QPELGFELLLPIFAAVVLGGIGNAFGALTAGLVLGLVIEWSTLVLPDGLKLI 358 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + F + R + Sbjct: 359 VGFVVLIVVLVI-------------RPEGIFGRAR 380 >gi|39934493|ref|NP_946769.1| transport system permease [Rhodopseudomonas palustris CGA009] gi|39648342|emb|CAE26862.1| possible transport system permease protein [Rhodopseudomonas palustris CGA009] Length = 336 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 125/327 (38%), Gaps = 23/327 (7%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ +L+ Y + L+YV A +IV G G +SL + IGA Sbjct: 14 WLWGILVLAACLPLALNSYHLHLLTLALVYVALASAWNIVGGMAGQVSLAHSLFIGIGAM 73 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 L ++G+++W + +SA I+GA G ++ +F+ +L+ + ++ +I Sbjct: 74 LSTALLVKFGINMWAGLVISAAIAGALGAMIAWIDFRFQLGHLSFVLITLAFAEMGAIIV 133 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 G A + R + ++V+LG+ + + Sbjct: 134 EGWEFLGGASGLLLPRDTGDFWAFQ------------FGGGRGAFWVMLGLAAAVVLVNV 181 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + RTIRDN+KA ++ ++ K++A +S+ + G + P Sbjct: 182 AILNAPLGYYLRTIRDNEKAAQAIGVNVLRHKITAMTISAVLTSIVGTCYVRYLTFADPY 241 Query: 260 -MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + + I ++ +GG+ A +L+ + E+ G + + Sbjct: 242 LLATPTITIEIVLFATVGGLGRAFGPALGALLLVPLGEVLRG----------QLGGAVPG 291 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345 H + + + +VIL+ LL L Sbjct: 292 LHYFIYGVVVIVVILVTPRGLLPLAER 318 >gi|46202726|ref|ZP_00052709.2| COG0559: Branched-chain amino acid ABC-type transport system, permease components [Magnetospirillum magnetotacticum MS-1] Length = 279 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 93/284 (32%), Gaps = 13/284 (4%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + Y + A GL++V G++ +++L +GAY + GL +P++ + Sbjct: 1 MLSGAYYALIALGLALVFGTMRVINLAHGELVLLGAYISYTAEEKLGLDPLASLPLALAV 60 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 +++ + D + +LI++ IL + Y T Sbjct: 61 VVGTAILVYYLVSLIKTDR-ELNSLILTFGIGVILTNGVLMIWSADIHSATTPWYHDATI 119 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + F I + ++ WL ++ A R + N+ A Sbjct: 120 LFETLFAMQAELVFAGIGILLV----------GAVWWWLEKSWYGRALRAVASNRDAAKL 169 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + ++ +FAVS +AG A ++ + I +L GM S+ Sbjct: 170 MGVNPQLTEILSFAVSGLLATVAGV--AIYTAKVIQPAMGHHLTVKAFIITVLAGMGSVP 227 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + +L V L + L + + Sbjct: 228 GVLLGAVLLGVVESLTVTLASSALQELAGMVLFLVVLLLMPSGL 271 >gi|28871220|ref|NP_793839.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28854470|gb|AAO57534.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 293 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 17/303 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + ++ A GL+I+ G +G++++ +GAY+ +L + + + P Sbjct: 5 NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTYVLSTLVQTYMPSMQPYYF 64 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + A ++ + + + +L W + + + Sbjct: 65 FFAIALSFVVAGSIGWLVER--VMISRLYHRPLDTLLATWGLSLVMQQALRSIFGAREVS 122 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + S + +V+ L+ I L L RT R N+ Sbjct: 123 ANPPEWLMGAVSLSDTIEIPRNGLFVMALTVLLTGCIFLMLYRTRWGLHVRATVQNRVMS 182 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ FA+ G+AGA A + + + +V+ GG S Sbjct: 183 RAVGINTREVDRMTFALGCGVAGVAGA--AFTTIGSTGPTAGSLYIVDTFLVVVFGGAQS 240 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + + + +L A+ L++LMR L Sbjct: 241 LLGTIASAFTIAQTQSIAEFFMSGSMAKVLTLS-------------AVILILLMRPQGLF 287 Query: 341 RLR 343 + Sbjct: 288 SSK 290 >gi|296134157|ref|YP_003641404.1| inner-membrane translocator [Thermincola sp. JR] gi|296032735|gb|ADG83503.1| inner-membrane translocator [Thermincola potens JR] Length = 297 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 96/305 (31%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ + +G Y + + L +L + Sbjct: 10 LANGISLGSLYALVAIGYTMVYGILRLINFAHGDIFMMGTYFAFYGIAVFTLPWYLSFLL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++G GM++ + + D I+ LI + +L + G Sbjct: 70 AIVLTGILGMMLEAGAYRPLRDAPKISILISAIGASFLLENLAVVIFGGRPKAFPTP--- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + + + L +++ + T A R + + + Sbjct: 127 -------RVLTDVVHIGSISIQNLTFVIPVVTIGLLIALLYLVHNTKAGMAMRAVAKDYE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + S + G + +I + + ++GG+ Sbjct: 180 TAAIMGVNVNKVISLTFCIGSMLAAVGGIMWGLKFPQI-IPLLGVMPGLKAFIAAVIGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + +L + + F + L L++L R Sbjct: 239 GDIKGAVIGGFVLGIGEIML-----------VAFLPELTGYRDAFAFVLLILILLFRPTG 287 Query: 339 LLRLR 343 +L + Sbjct: 288 ILGEK 292 >gi|254489168|ref|ZP_05102372.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] gi|214042176|gb|EEB82815.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] Length = 318 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 108/323 (33%), Gaps = 30/323 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + L+ M + GL+++ +G+L+ Y +GAY + W+ + Sbjct: 7 NLIDGLVTGLLLFMLSAGLTLIFSMMGVLNFAHASFYMLGAYFAYQISVAL--GFWMGLL 64 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ ++ G G + L+ Y + LI + ++ + GK + Sbjct: 65 IAPLLVGVLGAGVERYGLRRVHQYGHVPELIFTFGLALLIEEMVQFVWGKNQMPY----- 119 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 +V ++ F F S + +++ + ++ L +T + + Sbjct: 120 ----SVPEVLNFTAFAISGNSIPAYKIFMIFISIGIFIGLLYILTKTRVGMIIQAALSYP 175 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + +L + + F V +A G+AG + F IV +++GG Sbjct: 176 RTVEALGHNVPLIFMGVFGVGTALAGLAGVIAGPVLG--TFPGMAFVLGSIVFVTIVIGG 233 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF-----------------NMRH 320 + SL A+ ++ + N + L S Sbjct: 234 LGSLWGALVASLLIGWITTFAKSYNIEMESLLNAIGISTPENLSDSVFRDFWSLTSPQIA 293 Query: 321 TTLMVIALFLVILMRSHSLLRLR 343 L I + L+++ R L R Sbjct: 294 DILPYILMVLILIFRPAGLFGKR 316 >gi|317125500|ref|YP_004099612.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Intrasporangium calvum DSM 43043] gi|315589588|gb|ADU48885.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Intrasporangium calvum DSM 43043] Length = 289 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 109/308 (35%), Gaps = 26/308 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y Y + A GL+++ G LG+++ + Y +GA +L + ++ WL + Sbjct: 6 QYTLQGLAAGGFYAVSALGLAVIFGVLGVVNFSHGAVYMLGAVLAAVLLAELNVNFWLAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +I G++M +++ + +++ +L++ G +G+ Sbjct: 66 VIVPIIMFGFGVLMERALIRWLLQLDPLYNFLLTFGLTLVLVEAVKQRYGVSGLPYQIPP 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G V + + L + ++ L L RT I R + Sbjct: 126 GLGGQ----------VTVGSVGLPTYAIFACLFSVVVCIAVGLLLTRTRIGMIVRAATEA 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L + F A G+AG A SR + F II+ ++V++G Sbjct: 176 PERTRALGINVGRWVTPVFGFGIALAGLAGVLAAPSRAITAEMGSNFV--IILFAVVVIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ A ++ V ++ I + LVIL+R Sbjct: 234 GLGSILGAVVAGFLVGLVEAYGVAYA--------------PAYAQIVIFIMMALVILVRP 279 Query: 337 HSLLRLRT 344 L Sbjct: 280 AGLFGREE 287 >gi|289581840|ref|YP_003480306.1| inner-membrane translocator [Natrialba magadii ATCC 43099] gi|289531393|gb|ADD05744.1| inner-membrane translocator [Natrialba magadii ATCC 43099] Length = 416 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 114/342 (33%), Gaps = 40/342 (11%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG------SRYGLSIW 93 + I +L +FA + G G LS Y GAY V+ G Sbjct: 52 LTFMIIVLYMGLFAISFDFISGYTGYLSFGHAAFYGTGAYFVVLAANGQVPGVPEGTPFM 111 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + + + A ++ + +G S + G Y A+ TL +++ + W +++ Sbjct: 112 VTMVLGATLAFVVALAIGAVSFRLTGVYFAMLTLGFAQVMYEFIRHWGYVSSNPTEGATI 171 Query: 154 DRLYFLGTTVRSLIRFFRF--------------PSSFVIYEIFMYYVLLGMCFLSASIIL 199 L V + V + YY L + LS ++ Sbjct: 172 SSGADLSIGVPFVDSLNFAVGRLSGDSFENVLGLGIDVSATMTSYYALGIVVLLSYFVMQ 231 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + IR+N++ ++ + + K+ AFA S+ F +AGA FAA SPD Sbjct: 232 RIIHSPFGKVMIAIRENEERARAVGYNVFWYKMGAFATSAFFAAIAGALFAAYAGGASPD 291 Query: 260 -MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK------- 311 F F + + I+GG+ +L+ ++ + L + Sbjct: 292 NSFYFLVTADALIMAIIGGIGTLAGPLFGALFHEWFEDILSTESDGLSTYLEQLLPESVL 351 Query: 312 ------------FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + R + I L +L + LL Sbjct: 352 TAEVAGLTINDFIGTFLDGRAPLYLGIIFVLFVLFVPNGLLG 393 >gi|15890469|ref|NP_356141.1| ABC transporter, membrane spanning protein (branched chain amino acid) [Agrobacterium tumefaciens str. C58] gi|15158700|gb|AAK88926.1| ABC transporter, membrane spanning protein (branched chain amino acid) [Agrobacterium tumefaciens str. C58] Length = 335 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 116/335 (34%), Gaps = 28/335 (8%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + K L LA ++ +G + ++ +I+ + + +V G G+ + Sbjct: 14 IPKARSPLRTLAGPLLIITAAIIGYFLFPDNL-ALLTRIIAIALLVLSIDLVTGYCGVAT 72 Query: 68 LNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 L + GAY+ I + + L+ + A G G++ G L+ G + + Sbjct: 73 LGHAALFGAGAYAAGIAAAHFEITDPLLMTVIGAAGGGVAGLLSGTVLLRAHGLPQLVLS 132 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 + + +F K T G G+ GT F ++ Y Sbjct: 133 IAVIHLFHEAANKASGWTGGSDGLSGVSPDALFGT------------FEFDLFGRTAYVY 180 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + L + + + R ++ + ++ ++ L F +S G+ G Sbjct: 181 GVCLLLLVFIALRVVVNSPFGMLCRGVKQDSIRIQAMGGSVNGTVLKMFVISGIVAGIGG 240 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 A A S + D F+ + + +++LGG SL T + ++ N +++ Sbjct: 241 ALNAISTQVVGLDSLSFTLSAEGLVMLVLGGAGSLYGALIGTVTFMWFEDVVSAANPFHW 300 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 T++ + L V+L L Sbjct: 301 --------------LTIVGLLLIAVVLFAPRGLYG 321 >gi|261405483|ref|YP_003241724.1| urea ABC transporter permease UrtB [Paenibacillus sp. Y412MC10] gi|261281946|gb|ACX63917.1| urea ABC transporter, permease protein UrtB [Paenibacillus sp. Y412MC10] Length = 301 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 16/290 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + G + ++++ IGAYS + + + + I+ M ++ + Sbjct: 27 VTFGLMNVINMAHGELIMIGAYSTYVTQGLFSAYMPKSWFDTYFIAALLVSFMVAAAVGW 86 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + I L ++L W + + T S + +S + Sbjct: 87 LLETVLIRHL-YGRPLDSLLATWGVGMMLQQIARFIFGAPNVAVTSPSWLNGGLAITSSI 145 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +++L + + ++ L++ RT R + N+ L + FA+ Sbjct: 146 ILPYKRLFIVLLVAVVLTAMYLYIYRTVQGRRMRAVMQNRSMAGCLGISTRRVDGLTFAI 205 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG + +V+LGG+ L + L Sbjct: 206 GSGIAGIAGCALTLLGPI--GPSIGTYYIVDAFMVVVLGGVGKLVGTVAGALGIGVFNTL 263 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L+ + + + L+ LRT S Sbjct: 264 FETYTSASIGK-------------VLVFACIVAFLQWKPRGLVALRTRSL 300 >gi|154245386|ref|YP_001416344.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154159471|gb|ABS66687.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 330 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 119/312 (38%), Gaps = 14/312 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 +L + + ++++ + +FA ++++G GLLS + + AY Sbjct: 25 IFGILAIAVLLAAPFGVYPVFLMKVMCFALFACAFNLLLGYTGLLSFGHAMFFGGSAYVC 84 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 G + L I + + G I GL +++ +G Y A+ TL ++++F ++ Sbjct: 85 AHTIKVMGFTPELGILAGVVFAAMLGFISGLLAIRRQGIYFAMVTLALAQMFFFFCLQA- 143 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 T G+ G+ R F + +I +YY++L + +I Sbjct: 144 RFTGGEDGLQAVPR-------------GALFGLIDLSKDINLYYLVLAIFVFGFLVIYRA 190 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + IR+N+ SL + KL AF +S+A G+AGA S Sbjct: 191 IHSPFGQVLKAIRENEPRAISLGYRVNQYKLLAFVLSAALAGLAGATKVLVFQLASLTDV 250 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + + VI + ++GGM ++ A+++ + G+ + Sbjct: 251 AWQMSGEVILMTLVGGMGTILGPIVGAAVIVTMQNYLAGLGEWVLVIQGVIFVLAVSLFR 310 Query: 322 TLMVIALFLVIL 333 V + +I Sbjct: 311 RGFVGEVIAIIQ 322 >gi|261341947|ref|ZP_05969805.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Enterobacter cancerogenus ATCC 35316] gi|288315853|gb|EFC54791.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Enterobacter cancerogenus ATCC 35316] Length = 308 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWIVGASENFSASITTMQLVIWVVTFLAMLALTVFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|171315845|ref|ZP_02905076.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] gi|171099034|gb|EDT43819.1| inner-membrane translocator [Burkholderia ambifaria MEX-5] Length = 313 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 22 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 81 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 GL W ++ ++ +I GA G+++ L++ + L+++ ++ G Sbjct: 82 YLGLPYWAMLALAPLIVGAFGILVERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 141 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 142 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 191 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 192 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 249 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 250 ITVFAVVVIGGMGSILGSIITGLLLGVIEGFTRVF--------------YPEASATVVFV 295 Query: 327 ALFLVILMRSHSLLR 341 + +V+L+R L Sbjct: 296 IMAIVLLIRPAGLFG 310 >gi|119962551|ref|YP_947059.1| branched chain amino acid ABC transporter permease [Arthrobacter aurescens TC1] gi|119949410|gb|ABM08321.1| putative Branched-chain amino acid transport system, permease component [Arthrobacter aurescens TC1] Length = 299 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 94/307 (30%), Gaps = 24/307 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + + GLS++ G+ GL + +GA + + ++ Sbjct: 15 LVAGLSFGLLLALASVGLSLIFGTTGLTNFAHGEMVTLGAVLVFMFNAFGFPFWLAILLA 74 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + R + +++ I + I++ + Sbjct: 75 LVGGGLFGYVQDAGLWRPLRKRGSGLVPMMIVSIGLALAIRYV-----------IQFFFG 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + V + L+ + A I + L +T + A R + DN Sbjct: 124 GATQQLPGAQSSEIQIGPVSISPNNLWSLIISAVVIALIGIVLLKTRLGKATRAVADNPA 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + V + G +A R ++ DM +++ + V LGG+ Sbjct: 184 LAAASGIDVDSVIRIVWIVGGVLASLGGILWAYYRPGVTFDMGSQIL-LLIFAGVTLGGL 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ + ++ VEL + + +V+L R Sbjct: 243 GTVFGALIGSIVVGIFVELTTVFGLP------------ADLKYVGALFIMIVVLLFRPQG 290 Query: 339 LLRLRTP 345 +L R Sbjct: 291 ILGRRER 297 >gi|170737605|ref|YP_001778865.1| monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3] gi|169819793|gb|ACA94375.1| Monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3] Length = 345 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 98/326 (30%), Gaps = 18/326 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 S F + + V+ + + S+ + + A + V+ Sbjct: 25 SRFFNPAARQKLLAFASLVLLIVFFSFASSNFLEVDNLVSILQATAVNGVLAVACTYVII 84 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + G + L+ A ++ +++G+ + L I + G + G K + Sbjct: 85 TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALCFGALSGCVSGFVIAKMKVPP 143 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + G + + R + T +I + Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGNLIPAL 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +L + ++ + L RT + N++A + K++ + S A Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296 G+AG A+ + P + + E + ++VI GG S+ I+ + Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322 M+ + + Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337 >gi|120611596|ref|YP_971274.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120590060|gb|ABM33500.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax citrulli AAC00-1] Length = 440 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 114/328 (34%), Gaps = 18/328 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + L + + +M QI ++ +I++G G+LS + + Sbjct: 20 AVVWGLFALALIVAPMLFTSSLALTMLSQIGYLIIICLSYNILLGQGGMLSFGHAVYTGL 79 Query: 77 GAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 G++ V + + + L+ V + +++G + K G A+ TL + E Sbjct: 80 GSFMAVHAMNWAGKGALPVPLVLIPLVGGLAGMFFAVLLGFVTTKKSGTTFAMITLGIGE 139 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + ++ + + + G+ GI + F I +YY++ C Sbjct: 140 LVASMALMFPEVFGGEGGIT------------TDRVYGKGFFGITFGPAIQVYYLIAAYC 187 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 F+ +++ T + +RDN + + + AF +S F G+ GA A Sbjct: 188 FVCTALMFAFTGTPLGRMLNAVRDNPERVEFIGYNTQRVRYYAFIISGFFAGIGGALAAI 247 Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + ++ D + + LGG T +L+ L ++ + L Sbjct: 248 NFEIVTAADSVSVMRSGSYLLFTFLGGATFFFGPIIGAVLLVFASVLLSELSKAWLLYLG 307 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHS 338 M + + + + + H Sbjct: 308 LVFLFMVMYAPGGIASLIMMNLRVARHG 335 >gi|81300986|ref|YP_401194.1| integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD [Synechococcus elongatus PCC 7942] gi|81169867|gb|ABB58207.1| integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD [Synechococcus elongatus PCC 7942] Length = 296 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 92/303 (30%), Gaps = 26/303 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + + + A GL+++ G L L + +GAY ++ S + + Sbjct: 20 INGLATGSLLALAATGLTLIYGILRLTNFAQGEFLTLGAYFTLVANSLGLSLWLAIPLGA 79 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 C + + R + TLI+ I ++ ++ I AG Sbjct: 80 IATIALCLLGEAVLWEPLRRQRVNTTTLIILTIGLSLFLRNLVILIWGAGNQAYRLAVQP 139 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 T+ + + V++G + L+RT+I R I D+ Sbjct: 140 ALTLWG-----------LRITLNSLLVVIGAAAALVLLHWVLQRTSIGKGMRAIADDPDL 188 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + ++ +AG + ++ + + + ILGG+ Sbjct: 189 ARVSGVPVETVIRWTWVIAGGLTAIAGGLYG--LITAVRPTMGWNLILPLFASAILGGIG 246 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S IL EL + + F + L V+++R L Sbjct: 247 SPYGAIAGGLILGFAQELSTYWLPAEYKLAVAF-------------VILIGVLVIRPQGL 293 Query: 340 LRL 342 Sbjct: 294 FAR 296 >gi|300691441|ref|YP_003752436.1| branched-chain amino acid ABC transporter membrane component (livH) [Ralstonia solanacearum PSI07] gi|299078501|emb|CBJ51154.1| putative ABC-type branched-chain amino acid transporter, membrane component (livH) [Ralstonia solanacearum PSI07] Length = 323 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 114/321 (35%), Gaps = 27/321 (8%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + L+ M + GL+++ +G+L+ Y +GAY ++ + W + Sbjct: 15 NLLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVISAHL--GFWAALI 72 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + ++ GA G ++ L+ Y +A L+ + ++ + + G L Sbjct: 73 AAPLLVGALGALVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 123 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + V + F + + +++L + I L L RT I + + Sbjct: 124 AVPYRVPEALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 183 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +L + + F A G+AG ++ + IV + ++GG Sbjct: 184 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 241 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL------- 330 M SL A+ ++ + ++ + L K + N + V +L + Sbjct: 242 MGSLVGAFVASLLIGCIQTFAVTLDLSVASLLGKLGVTLNPDVPLISVWSLTIAQVAPVL 301 Query: 331 -------VILMRSHSLLRLRT 344 +++ R L+ R Sbjct: 302 PYLLLVLMLIFRPRGLMGTRE 322 >gi|260425460|ref|ZP_05779440.1| ABC branched chain amino acid family transporter, inner membrane subunit [Citreicella sp. SE45] gi|260423400|gb|EEX16650.1| ABC branched chain amino acid family transporter, inner membrane subunit [Citreicella sp. SE45] Length = 290 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 107/307 (34%), Gaps = 26/307 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ + + YV+ A GL+++ G LG+++ Y +G ++ + L + GL + + + Sbjct: 6 QYLANGIVVGSSYVLVAVGLTLIFGILGIVNFAHGEFYMLGGFAGIGLATVLGLPLIVSL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + G + + D +++ S +L + G + Sbjct: 66 LGVVAFAALLGFLAEQILNRQVKDKDPTNSIVSSFGLAVVLQNAALLLIGPQPML----- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +R+ + V + + + M L ++ L LR T + + R + Sbjct: 121 ------LRTDLSMVPVEIGPVYLPLQRALIPVAMIVLVGALHLLLRYTWVGMSLRAMAQQ 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + F + F G+AG ++ + + ++VILG Sbjct: 175 PTVARMCGIRVSRVAIVTFMTGAVFAGVAGFLMSSVFMV--HPLIGNMIVLKAFTVVILG 232 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM S++ A A +L V + N + + + +V+L Sbjct: 233 GMGSVTGAAAAGLMLGIVESMTSAYLG-------------NGLRDIVGFLMVVIVLLAWP 279 Query: 337 HSLLRLR 343 + + Sbjct: 280 QGIFGRK 286 >gi|171912954|ref|ZP_02928424.1| Ribose transport system permease protein [Verrucomicrobium spinosum DSM 4136] Length = 328 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 96/313 (30%), Gaps = 18/313 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + LL + ++ L +++ + +Y + ++ V+ G + L+ Sbjct: 2 KKNLGISLLLLFVCVVTSLVNPNFLIPYNAENLVNWVSLYAIIGLAVTFVI-ITGGIDLS 60 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + L G + + + V+A +S + G++ GL K + + Sbjct: 61 IGSVVGLVGTVLGWLLVEKGWPVPVALVVTAALSASIGLVHGLLITKVKLQPFVVTLCG- 119 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + L F + + + L+ Sbjct: 120 ----------LLIYRGVARWLVHDGTLGFGTAYDGQRWFANGRIALPFFGDYRLPAPLII 169 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ ++L +T + N++A + ++ + S G+ G F Sbjct: 170 LAVIAGLAAVFLNKTVWGRHLFALGRNEEAARYSGIRTDRLVILSYVLCSTLAGIGGILF 229 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNF 303 A + + P + I+ +LGG S+ + TA++ ++ + Sbjct: 230 ALDVNTVQPASQGNFYELYAIAAAVLGGCSLRGGEGSVIGVLIGTALIRVLLNAINILGI 289 Query: 304 YYFNSLLKFDCSF 316 + Sbjct: 290 ATQLEFVVLGMVI 302 >gi|218781509|ref|YP_002432827.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218762893|gb|ACL05359.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 434 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 91/310 (29%), Gaps = 24/310 (7%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y L+ +M L+++ G +G S + A+GAY+ + + Sbjct: 139 SAYRVMTLKFTLVAIMLTLSLNVINGYMGEFSCSHPGFMALGAYAASVFTLVLFTNDRFF 198 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 S + L + I I Sbjct: 199 GEAVLSPSLGVYFFPVAIIIGGFTAALGALVIA---------IPSFRTRGDYLAIISLAF 249 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 ++ + + + +L ++ G L +I R+ + A +RD Sbjct: 250 MFIVKSLIENLEVVGGPRGLGSQPNYASLPMVFGWTVLCIWVINNFVRSTLGKALNAVRD 309 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 ++ A ++ K+ F + + G AG FA ++P F ++++V Sbjct: 310 DESAADAMTVNTRRTKMVGFLFGAFWAGAAGGLFAHILRYVNPASFGLQRLAEILAMVYF 369 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ S+ + + E + + + + V++ R Sbjct: 370 GGLNSVHGSIVGAVSISLLGEALRPLELFKWIIIPLLLIL---------------VMIFR 414 Query: 336 SHSLLRLRTP 345 L+ + Sbjct: 415 PTGLIAFKEF 424 >gi|320158359|ref|YP_004190737.1| ribose ABC transport system, permease RbsC [Vibrio vulnificus MO6-24/O] gi|319933671|gb|ADV88534.1| ribose ABC transport system, permease protein RbsC [Vibrio vulnificus MO6-24/O] Length = 328 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 32/312 (10%), Positives = 96/312 (30%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 30 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 88 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + ++ + + + +P + + G I G+ K + + M+ Sbjct: 89 LCG-AFAASLVAMEVPVLIAVPTALLAGATLGAISGIIIAKGKVQAFIATLVTMT----- 142 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G +Y R G T + + + + ++ +++ Sbjct: 143 -------LLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWY 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + T + N+ A + K+ +A+ +AG + Sbjct: 196 LL----NHTRFGRYVYALGGNESATRLSGINVDKVKIGVYAICGLLAALAGIIVTSRLSS 251 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 252 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 311 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 312 AKAAVILLAVMV 323 >gi|317154714|ref|YP_004122762.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] gi|316944965|gb|ADU64016.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] Length = 300 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 18/304 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G ++V G + L++ +A G Y VI S Sbjct: 8 FINGLTLGGVYALIALGYTMVYGIIQLINFAHGEFFAAGGYMGVIFISWLAAQGVHPYLC 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + L ++ + + Sbjct: 68 LGIGLVLAMLYCALLAMAVERLAYRPLRQASRLAVLLSALGMSIF----LQNGLMLTQGQ 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + I F + ++ FL ++ L + +T I A R ++ Sbjct: 124 YDVAYPTEITAGGFQLGGLYISYMQCLIVALTAFLLLALNLLVFKTRIGKAMRATAQDKV 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ + AG +S M F I + +LGG+ Sbjct: 184 MSALVGINANHIIALTFAIGAGLAAAAGIMVGLYYGTVSYSM-GFVPGIKAFAAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ I+ V G + + F + L V+ + Sbjct: 243 GNITGAMLGGLIIGMVEIFAAGYISGEYKDVFAF-------------VILIAVLYFKPTG 289 Query: 339 LLRL 342 ++ Sbjct: 290 IMGE 293 >gi|188535381|ref|YP_001909178.1| branched-chain amino acid transporter permease subunit LivH [Erwinia tasmaniensis Et1/99] gi|188030423|emb|CAO98317.1| High-affinity branched-chain amino acid transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 96/312 (30%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y I+ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 V+ +I+ G + + + + LI + L + +T G Sbjct: 72 LISCGFVVAVVIASCYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTQGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + V + ++ L++R + + A Sbjct: 129 ----RDLALPSLVTGQWTLGVSNGFAATISTMQMVIWGVTFLAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFLAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L + Sbjct: 244 TAAVLGGIGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIV 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|304397874|ref|ZP_07379750.1| inner-membrane translocator [Pantoea sp. aB] gi|304354585|gb|EFM18956.1| inner-membrane translocator [Pantoea sp. aB] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MLNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTGWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 +++ + I I + R Sbjct: 72 MIAAGFVMAILISSAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ ++R + + A R ++ Sbjct: 132 ALPSLITGQWTVGESNGFAATISTMQVVIWVVTFLAMLALTTFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +AG I+ F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSIN-PFIGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|107025686|ref|YP_623197.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054] gi|116693132|ref|YP_838665.1| inner-membrane translocator [Burkholderia cenocepacia HI2424] gi|254250041|ref|ZP_04943361.1| Inner-membrane translocator [Burkholderia cenocepacia PC184] gi|105895060|gb|ABF78224.1| monosaccharide ABC transporter membrane protein, CUT2 family [Burkholderia cenocepacia AU 1054] gi|116651132|gb|ABK11772.1| monosaccharide ABC transporter membrane protein, CUT2 family [Burkholderia cenocepacia HI2424] gi|124876542|gb|EAY66532.1| Inner-membrane translocator [Burkholderia cenocepacia PC184] Length = 345 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 98/326 (30%), Gaps = 18/326 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 S F + + V+ + + S+ + + A + V+ Sbjct: 25 SRFFNPAARQKLLAFASLVLLIVFFSFASSNFLEVDNLVSILQATAVNGVLAVACTYVII 84 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + G + L+ A ++ +++G+ + L I + G + G K + Sbjct: 85 TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALCFGALSGCVSGFVIAKMKVPP 143 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + G + + R + T +I + Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGNLIPAL 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +L + ++ + L RT + N++A + K++ + S A Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296 G+AG A+ + P + + E + ++VI GG S+ I+ + Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322 M+ + + Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337 >gi|254695177|ref|ZP_05157005.1| Bacterial inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] gi|261215535|ref|ZP_05929816.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] gi|260917142|gb|EEX84003.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] Length = 406 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 112/315 (35%), Gaps = 34/315 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+LS + +G+++ V + + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHVMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGD----YLAIATLIMSEIFQNILIKWKPITNGK 147 L P+ + G++ GL + F Y A TL ++E+ + K G+ Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAKITLALAELLHALAPHLKGTFGGE 139 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 AG+ + + +YY+ L S ++ L T Sbjct: 140 AGVSSFRMPAWGFDFGSTTE---------------VYYLALAWVVGSILLLFLLTLTPFG 184 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 +R+N L + FA+S+ F G+AGA A + + + +F+ + Sbjct: 185 RVTVGLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGIST 244 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 V+ + G+ + A A + + + + + Sbjct: 245 AVVLNSFIDGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLI 289 Query: 328 LFLVILMRSHSLLRL 342 LV++ L+ Sbjct: 290 FVLVMMFLPRGLVGE 304 >gi|166362958|ref|YP_001655231.1| amino acid transport system permease protein [Microcystis aeruginosa NIES-843] gi|166085331|dbj|BAG00039.1| amino acid transport system permease protein [Microcystis aeruginosa NIES-843] Length = 287 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 92/292 (31%), Gaps = 12/292 (4%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + + + + I + A GL++ G L L + +GAY ++ ++ Sbjct: 3 TPQLLFNGLAVGSIIALAAVGLTLTCGILRLSNFAHGDFMTLGAYITWVVNAQGINLWLA 62 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 ++ +A+ + A + L R TLI+ I + ++ + D Sbjct: 63 MLVGAAVTAIAMLIAERLLWKPMRDRRADSTTLIIISIGLALFLRNGILMIWGGSNQRYD 122 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 T + V+ + ++ L L++T I A R + Sbjct: 123 LPVMTAT-----------EIFGIKVAFDRLLVIGLAIIVIIALHLLLQKTKIGKAMRAVA 171 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 D+ + + + ++ +AGA F + + + + + VI Sbjct: 172 DSTDLARVTGINVEWVVFWTWIITGVLTALAGAMFGLITGGV-RPNMGWFLILPMFAAVI 230 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 LGG+ + I+ E+ + + + + + Sbjct: 231 LGGIGNPYGAIAGALIIGVAQEISVPLIGSDYKLAVALLIMILLLLFRPQGL 282 >gi|197118569|ref|YP_002138996.1| branched-chain amino acid ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197087929|gb|ACH39200.1| branched-chain amino acid ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 294 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 93/305 (30%), Gaps = 26/305 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 +++ S IY + +I+ S G+++ +G + + L + Sbjct: 8 SQFVISGLATGAIYALIGLSFAIIFNSTGIINFAQGEFVMLGGVLTIFCINALQLPLLAA 67 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 I + + G++ +++ + +A +I++ ++ + GK Sbjct: 68 ICAAVAGTTVIGLVFERLAIRPLKNATPLALIIITIGASILIRGVVMLLWGKD------- 120 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + ++ + L+ T A R Sbjct: 121 ----TKALPAFSGNDPISVAGATLLPQHLWIFGVTILVIVGCRLFFHHTISGKAMRACSF 176 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N +A + ++ L +F +S+A +AG A + I+ Sbjct: 177 NPRAANLVGVSVGRMVLFSFVISAAVGSLAGVIIAPLTMTA--YDVGVMLGLKGFCAAIM 234 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GGM S IL + L G+ + + F L L++ +R Sbjct: 235 GGMGSGLGTVLGGLILGALESLGAGLISSGYKDAIAFC-------------ILLLILFIR 281 Query: 336 SHSLL 340 L Sbjct: 282 PQGLF 286 >gi|261250789|ref|ZP_05943363.1| ribose ABC transport system permease protein RbsC [Vibrio orientalis CIP 102891] gi|260937662|gb|EEX93650.1| ribose ABC transport system permease protein RbsC [Vibrio orientalis CIP 102891] Length = 327 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 29/312 (9%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q I + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSINAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAASLIAMEVPVLIAVPTALFAGAALGAISGVIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFASVWYV 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|149915303|ref|ZP_01903831.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter sp. AzwK-3b] gi|149811024|gb|EDM70863.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter sp. AzwK-3b] Length = 336 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 37/334 (11%), Positives = 86/334 (25%), Gaps = 19/334 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG--------- 77 L + + + A G++++ G L + A G Sbjct: 3 ILNALVALANFVLVPALAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVTILVTW 62 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 A +G + L +P + A ++ +F A +++ + Sbjct: 63 AMQAAGIGLGPLPTALLALPFGILGCMALVLVTDRVVYRFYRVQKAKPVILVIVSIGVMF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + + ++ + A + Sbjct: 123 ILNGLVRFVIGPDDQRFADGERFIISARTFKEMTGLEEGLAIRTTQGITVVTAVIVVALL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L RT + R DN+ + + + +A +AG + + Sbjct: 183 FWFLNRTRTGKSMRAYSDNEDLALLSGINPDRVVMVTWLIVAALATVAGVLYGLDKSF-- 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309 F + V + I+GG+ + I+ + + Sbjct: 241 KPFTYFQLLLPVFASAIVGGLGNPLGAIAGGFIIAFSEVTITYAWKKVLGYVMPEGLEPE 300 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L +V+L R L R + Sbjct: 301 GLVQLLSTDYKFAVSFVILLIVLLFRPTGLFRGK 334 >gi|260907108|ref|ZP_05915430.1| inner-membrane translocator [Brevibacterium linens BL2] Length = 290 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 107/302 (35%), Gaps = 27/302 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + I + A G ++ + G+++ IGAY++ L I + V + Sbjct: 12 LSEGAILALAALGFVLIYKATGVINFAQGEFLLIGAYTFYTAFVILRLPIVVAALVGVVA 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + G+++ L+ I+ ++++ +L + G + Sbjct: 72 AVIIGVLVERFILRPMVGQSHISIIMVTIGLAGLLSALVQMFFGTQPRSMPPLFPRTQ-- 129 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 +VLL + + L+ +R+ A R + D+Q+A + Sbjct: 130 ---------LEILGAHIPANRLWVLLVAGIVLTLLTLFFQRSKHGIAMRAVADDQQAAMT 180 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + ++ ++A+++ +AG A D + +M + ++V +VILGG+ S+ Sbjct: 181 VGISVRRVFALSWALAAVSALIAGILLA---DVTTVEMNLVNFGLLVFPVVILGGLDSVP 237 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + G + I L L++L+R + + Sbjct: 238 GTIVGGLTIGLISQFVAGYLDPGLAEVAP-------------YIVLVLILLVRPYGVFGE 284 Query: 343 RT 344 + Sbjct: 285 KR 286 >gi|331685101|ref|ZP_08385687.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli H299] gi|331077472|gb|EGI48684.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli H299] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|302541670|ref|ZP_07294012.1| ribose ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302459288|gb|EFL22381.1| ribose ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 340 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 98/312 (31%), Gaps = 25/312 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + ++ F+ +Q + ++ Q + + A G++ V+ +G + L+ A Sbjct: 40 ALGLLAMCVVFFIATPYFLTQSNLLNIVDQTAVLGLLALGMTAVI-VMGGIDLSVGATLA 98 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L G +WL + ++GACG+ GL + ATL M I + Sbjct: 99 LATMVVGWLSHDQGWPLWLSAVAAIAVAGACGLANGLGITYTKLPPFI-ATLAMMSIARG 157 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G + + S + Y + L Sbjct: 158 LANVI------TDGQQIVGFPDWFD------------NLSTIRYVGVFTVCTAVLAALYV 199 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + ++R + A + + + + + + V+ G+AG F D Sbjct: 200 AGWAYMRYRSGGRALYAMGGSAEVARLAGIKVKQRTVLVYTVTGLLAGLAGVFLTMRLDS 259 Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++VI GG+ S++ I+ + + F + Sbjct: 260 SQPSAGTGYELDTIAAVVIGGASLSGGVGSITGTLIGVLIIGVLRNGLNLLGVSPFIQQI 319 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 320 VIGLVIALAVML 331 >gi|146319201|ref|YP_001198913.1| branched chain amino acid ABC transporter permease [Streptococcus suis 05ZYH33] gi|146321404|ref|YP_001201115.1| branched chain amino acid ABC transporter permease [Streptococcus suis 98HAH33] gi|253752244|ref|YP_003025385.1| branched-chain amino acid transport system permease protein [Streptococcus suis SC84] gi|253754070|ref|YP_003027211.1| branched-chain amino acid ABC transporter permease [Streptococcus suis P1/7] gi|253756004|ref|YP_003029144.1| branched-chain amino acid transport system permease protein [Streptococcus suis BM407] gi|145690007|gb|ABP90513.1| Branched-chain amino acid ABC-type transport system, permease component [Streptococcus suis 05ZYH33] gi|145692210|gb|ABP92715.1| Branched-chain amino acid ABC-type transport system, permease component [Streptococcus suis 98HAH33] gi|251816533|emb|CAZ52169.1| branched-chain amino acid transport system permease protein [Streptococcus suis SC84] gi|251818468|emb|CAZ56297.1| branched-chain amino acid transport system permease protein [Streptococcus suis BM407] gi|251820316|emb|CAR46835.1| branched-chain amino acid transport system permease protein [Streptococcus suis P1/7] gi|292558835|gb|ADE31836.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus suis GZ1] gi|319758633|gb|ADV70575.1| branched chain amino acid ABC transporter permease [Streptococcus suis JS14] Length = 295 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 100/303 (33%), Gaps = 19/303 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + ++ Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLYMMGAFMGYFLLNNLT---FIADGG 61 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++G L ++LA L S ++ + + Sbjct: 62 TRFFVALILAMVGTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFFLE--YTMIKFFTA 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I F V +L L ++ L ++RT + A R + + Sbjct: 120 DVKAFPQAIEAVTFNLGPVSVTNIQLIILGVSLALMVALQLIVKRTKMGKAMRAVSVDSD 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG ++I P M + + +LGG+ Sbjct: 180 AAQLMGINVNRTISFTFALGSALAGAAGVLLGLYYNQIEPLM-GMTPGLKAFVAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A ++ + + F+ ++ L +++L+R Sbjct: 239 GIIPGAALGGFVIGIIET-------------FTYVIEFDTFRDAIVYTVLIIILLVRPSG 285 Query: 339 LLR 341 +L Sbjct: 286 ILG 288 >gi|330837343|ref|YP_004411984.1| monosaccharide ABC transporter membrane protein, CUT2 family [Spirochaeta coccoides DSM 17374] gi|329749246|gb|AEC02602.1| monosaccharide ABC transporter membrane protein, CUT2 family [Spirochaeta coccoides DSM 17374] Length = 646 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 33/314 (10%), Positives = 83/314 (26%), Gaps = 19/314 (6%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 L G S I ++ Q + + +A G++ ++ G L+ A+GA + Sbjct: 328 LASVSGSGNLFSLPNILTILEQSSVRMFYALGVAGLILLAG-TDLSVGRMVALGAVLTGL 386 Query: 84 L-------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY--LAIATLIMSEIFQ 134 + + + + W + ++ M + + + + A L + Sbjct: 387 ILHPGTNIVTLFKMGPWDFSTIPMVVRVLMAMSISVVLCVLFSTFAGVFTARLRIHPFIS 446 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + G T ++ + I +++ Sbjct: 447 TLATQLIIYGLLFFGTSGTPVGSIDST-IKDALGGRWILGFVNGELITFPKLIIPAAIAV 505 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 +T + N +A ++ L F ++ F G+ F A + Sbjct: 506 IVAWFIWNKTTFGKNMYAVGGNSEAASVSGISVFKVTLKVFIMAGVFYGLGAFFEAFRAN 565 Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + I+ ++ GG+ + I G+ + Sbjct: 566 A--SAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVIGVIIFTGLTYCLTFLGIDTNLQ 623 Query: 309 LLKFDCSFNMRHTT 322 + Sbjct: 624 FVFKGFIIIAAVAL 637 >gi|311105599|ref|YP_003978452.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310760288|gb|ADP15737.1| inner-membrane translocator 26 [Achromobacter xylosoxidans A8] Length = 296 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 93/307 (30%), Gaps = 19/307 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + I L Y + A GL+++ G L +++ Y IGAY+Y ++ G+ WL +P+ Sbjct: 7 FVNGLIIGLYYALMAVGLTMIFGILKVVNFAHGEFYMIGAYTYTLVSLALGVPPWLALPI 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A G R Y + + + +++ + + Y Sbjct: 67 AAAAGALLGWATER--WLMRPLYAGYGSWGLMKDEYAVVVTFGLSLLLINLVDKVVGPYP 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + S + + + + L + + L+++R+ + + N+ Sbjct: 125 MRGPALSDVTRMAVGPFMMSGQKLITAGLSIVLL--IGLALFIKRSLWGRQVQAVAQNRL 182 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A F S +AGA A + I IV++GGM Sbjct: 183 GASIAGIDTARASSIIFMASGVLAALAGALLAPVIN--PAPDVGAFPAIKSYVIVVIGGM 240 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A L + Y + + R Sbjct: 241 GSIPGSIVAALALGVLESFGAVYLSYDYRDTFGLALLILILL-------------FRPKG 287 Query: 339 LLRLRTP 345 L R Sbjct: 288 LFGERAR 294 >gi|238019547|ref|ZP_04599973.1| hypothetical protein VEIDISOL_01416 [Veillonella dispar ATCC 17748] gi|237864246|gb|EEP65536.1| hypothetical protein VEIDISOL_01416 [Veillonella dispar ATCC 17748] Length = 293 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 100/308 (32%), Gaps = 27/308 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A GL++V G L ++++ + IGA+ + + + + ++I++ + V Sbjct: 6 LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFDVNIFVALIV 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G ++ + + +A LI + L + G Sbjct: 66 AMAVGAILGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + M + + + ++T I A R + + Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSVVLMLILNVVI-----------KKTKIGKAIRAVSMS 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++SA AG S + I P M ++++ILG Sbjct: 175 TETAALLGINPTMIISVTVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +++ IL F + F + L++ R Sbjct: 234 GLGNITGAMVGGFILGVAEIFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280 Query: 337 HSLLRLRT 344 L + Sbjct: 281 QGLFGSKD 288 >gi|16762740|ref|NP_458357.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766849|ref|NP_462464.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29144227|ref|NP_807569.1| branched-subunit Amino acid transporter permease LivH [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415462|ref|YP_152537.1| branched-subunit Amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161616608|ref|YP_001590573.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167990776|ref|ZP_02571875.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168235154|ref|ZP_02660212.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168241712|ref|ZP_02666644.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260710|ref|ZP_02682683.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465159|ref|ZP_02699051.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818623|ref|ZP_02830623.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443794|ref|YP_002042808.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448834|ref|YP_002047588.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194734280|ref|YP_002116497.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197262181|ref|ZP_03162255.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364392|ref|YP_002144029.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243928|ref|YP_002217521.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388482|ref|ZP_03215094.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928629|ref|ZP_03219828.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354819|ref|YP_002228620.1| branched-chain amino acid transporter permease LivH [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858801|ref|YP_002245452.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213419306|ref|ZP_03352372.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426838|ref|ZP_03359588.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649992|ref|ZP_03380045.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865194|ref|ZP_03387313.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289829440|ref|ZP_06547052.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61227648|sp|P0A2J1|LIVH_SALTY RecName: Full=High-affinity branched-chain amino acid transport system permease protein livH; AltName: Full=LIV-I protein H gi|61227649|sp|P0A2J2|LIVH_SALTI RecName: Full=High-affinity branched-chain amino acid transport system permease protein livH; AltName: Full=LIV-I protein H gi|25301321|pir||AG0992 high-affinity branched-chain amino acid transport system permease protein STY4249 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|217072|dbj|BAA02129.1| LivA protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16422123|gb|AAL22423.1| high-affinity branched-chain amino acid transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16505046|emb|CAD08067.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139864|gb|AAO71429.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129719|gb|AAV79225.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161365972|gb|ABX69740.1| hypothetical protein SPAB_04425 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402457|gb|ACF62679.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407138|gb|ACF67357.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194709782|gb|ACF89003.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632289|gb|EDX50773.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095869|emb|CAR61443.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197240436|gb|EDY23056.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291326|gb|EDY30678.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938444|gb|ACH75777.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605580|gb|EDZ04125.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322062|gb|EDZ07260.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274600|emb|CAR39650.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205330826|gb|EDZ17590.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339037|gb|EDZ25801.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344497|gb|EDZ31261.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350402|gb|EDZ37033.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710604|emb|CAR34962.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248716|emb|CBG26554.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995792|gb|ACY90677.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160103|emb|CBW19623.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914587|dbj|BAJ38561.1| branched-chain amino acid ABC transporter permease protein LivH [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087973|emb|CBY97735.1| High-affinity branched-chain amino acid transport system permease protein livM LIV-I protein M [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322614070|gb|EFY11006.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617962|gb|EFY14855.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625424|gb|EFY22250.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629889|gb|EFY26662.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632222|gb|EFY28973.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636427|gb|EFY33134.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643176|gb|EFY39749.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644717|gb|EFY41253.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651261|gb|EFY47645.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652826|gb|EFY49165.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659128|gb|EFY55380.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663170|gb|EFY59374.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668657|gb|EFY64810.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674540|gb|EFY70633.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678255|gb|EFY74316.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682489|gb|EFY78510.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684202|gb|EFY80208.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323131922|gb|ADX19352.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192243|gb|EFZ77475.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196330|gb|EFZ81482.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201868|gb|EFZ86931.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206411|gb|EFZ91372.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212004|gb|EFZ96831.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216909|gb|EGA01632.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222309|gb|EGA06692.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224323|gb|EGA08612.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228251|gb|EGA12382.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233481|gb|EGA17574.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237057|gb|EGA21124.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243728|gb|EGA27744.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246030|gb|EGA30017.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250806|gb|EGA34684.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255817|gb|EGA39567.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261907|gb|EGA45474.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267701|gb|EGA51183.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268581|gb|EGA52048.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625302|gb|EGE31647.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629963|gb|EGE36306.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332990414|gb|AEF09397.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFIGAIIIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWIVGSSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|329295843|ref|ZP_08253179.1| branched-chain amino acid transporter permease subunit LivH [Plautia stali symbiont] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 86/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTSWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 +I+ + I I + R Sbjct: 72 MIAAGFVMAVIISSAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ L++R + + A R ++ Sbjct: 132 ALPSLITGQWTLGESNGFAATLTTMQLVIWVVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +AG I+ F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSIN-PFIGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|294793493|ref|ZP_06758630.1| branched-chain amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|294455063|gb|EFG23435.1| branched-chain amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] Length = 293 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 100/308 (32%), Gaps = 27/308 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A GL++V G L ++++ + IGA+ + + + + ++I++ + V Sbjct: 6 LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFDVNIFVALIV 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G I+ + + +A LI + L + G Sbjct: 66 AMAVGAILGYILEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + M + + + ++T I A R + + Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSVVLMLILNVVI-----------KKTKIGKAIRAVSMS 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++SA AG S + I P M ++++ILG Sbjct: 175 TETAALLGINPTMIISITVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +++ IL F + F + L++ R Sbjct: 234 GLGNITGAMVGGFILGVAEIFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280 Query: 337 HSLLRLRT 344 L + Sbjct: 281 QGLFGSKD 288 >gi|170767119|ref|ZP_02901572.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia albertii TW07627] gi|170124557|gb|EDS93488.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia albertii TW07627] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMLGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAEGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|147672299|ref|YP_001214850.1| ribose ABC transporter permease protein [Vibrio cholerae O395] gi|146314682|gb|ABQ19222.1| ribose transport system permease protein RbsC [Vibrio cholerae O395] Length = 322 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 24 LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 82 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 83 LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 130 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 131 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYL 190 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 191 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 245 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 246 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 305 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 306 AKAVVILLAVLV 317 >gi|115526590|ref|YP_783501.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115520537|gb|ABJ08521.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 94/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +Y++ A GL+I+ G +G++++ +GAY + S + + L + Sbjct: 22 LILFSVYLLMALGLAIIFGQMGVINMAHGEFMILGAYVTWLTSSAFQAYLPSLFAGYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + I L + +L W + +G Sbjct: 82 AMILAFIAAGALGMLVEWGL--IRFLYKRPLDTLLATWGLSLILQQTYRSVFGAREVGVD 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + + I +V+ ++A++ + ++ R + N+ + Sbjct: 140 LPQWMLGSKQITDTIEVPINGIFVMCLTVLITAAVAYIMYKSRWGRQVRAVMQNRVMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + G+AG+ F + + +V+ GG SL Sbjct: 200 VGINTEKVDRATFGLGCGIAGVAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLF 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ ++++R L L Sbjct: 258 GTIASAFSISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMVRPQGLFAL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|213969637|ref|ZP_03397773.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|213925733|gb|EEB59292.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 293 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 17/303 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + ++ A GL+I+ G +G++++ +GAY+ +L + + + P Sbjct: 5 NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTYVLSTLVQTYMPSMQPYYF 64 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + A ++ + + + +L W + + + Sbjct: 65 FFAIALSFVVAGSIGWVVER--VMISRLYHRPLDTLLATWGLSLVMQQALRSIFGAREVS 122 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + S + +V+ L+ I L L RT R N+ Sbjct: 123 ANPPEWLMGAVSLSDTIEIPRNGLFVMALTVLLTCGIFLMLYRTRWGLHVRATVQNRVMS 182 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ FA+ G+AGA A + + + +V+ GG S Sbjct: 183 RAVGINTREVDRMTFALGCGVAGVAGA--AFTTIGSTGPTAGSLYIVDTFLVVVFGGAQS 240 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + + + +L A+ L++LMR L Sbjct: 241 LLGTIASAFTIAQTQSIAEFFMSGSMAKVLTLS-------------AVILILLMRPQGLF 287 Query: 341 RLR 343 + Sbjct: 288 SSK 290 >gi|237817254|ref|ZP_04596246.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|297249758|ref|ZP_06933459.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|237788067|gb|EEP62283.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|297173627|gb|EFH32991.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] Length = 312 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 33/274 (12%), Positives = 84/274 (30%), Gaps = 14/274 (5%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 32 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 91 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L A + + +I + G + Sbjct: 92 LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 140 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + A R + ++ A + + Sbjct: 141 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 200 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 201 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 258 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 I+ + + + F + Sbjct: 259 ALIIGVIDTMSGYYIGSDLREAVVFGIFLLILIL 292 >gi|222100408|ref|YP_002534976.1| Branched chain amino acid ABC transporter, permease protein [Thermotoga neapolitana DSM 4359] gi|221572798|gb|ACM23610.1| Branched chain amino acid ABC transporter, permease protein [Thermotoga neapolitana DSM 4359] Length = 306 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 97/311 (31%), Gaps = 18/311 (5%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + + + + +Y + A G ++V G L L++ +G Y + LS Sbjct: 9 VFFLQNLFNGIMLGGLYALIAIGYTMVYGILRLINFAHGDVMMMGVYFAFYAATLLSLSP 68 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 +L V+ + + G ++ + K + I+ LI + L + G Sbjct: 69 FLSAVVAILGAALLGFLIDRVAYKPLRNAPRISALITAIGVSFFLESLAVVIFGAI---- 124 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 FL I + + + V+ + + + RT I A R Sbjct: 125 --PKSFLNVFKDRTILNKVLIVAGARIPLLTFLVIFITAVILVVLFFIVYRTKIGMAMRA 182 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 I + + + FA+ SA +G +A + P M F + Sbjct: 183 ISMDIPTTSLMGVNVDAVIGFTFALGSALAAASGIMWAMRFPNVHPYM-GFMPGLKAFIA 241 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 + GG+ S+ +L + I L +++ Sbjct: 242 AVFGGIGSIPGAVLGGVLLGLIEIFLAAYFPSVMG-----------YRDAFAFIILIVIL 290 Query: 333 LMRSHSLLRLR 343 L++ LL + Sbjct: 291 LVKPSGLLGKK 301 >gi|110807285|ref|YP_690805.1| branched-chain amino acid transporter permease subunit LivH [Shigella flexneri 5 str. 8401] gi|110616833|gb|ABF05500.1| High-affinity branched-chain amino acid transport system permease protein livH [Shigella flexneri 5 str. 8401] gi|332750290|gb|EGJ80701.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella flexneri 4343-70] Length = 297 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 1 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 60 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 61 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 117 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 118 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 173 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 174 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYCVINPY-IGFMAGMKAF 232 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 233 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 279 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 280 VLLVMPTGILGR 291 >gi|84686543|ref|ZP_01014436.1| Putative high-affinity branched-chain amino acid transporter membrane protein [Maritimibacter alkaliphilus HTCC2654] gi|84665456|gb|EAQ11933.1| Putative high-affinity branched-chain amino acid transporter membrane protein [Rhodobacterales bacterium HTCC2654] Length = 310 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 106/298 (35%), Gaps = 26/298 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + Y+ S+G+ I +Y + A ++ G +SL + IG Y Sbjct: 23 PLTNDGYLISLGVSIAMYTVLATSWALFSGPTHYISLATAAFFGIGTYVMGSGIEHLPY- 81 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 W+L+P++ +I G ++GL +L+ G Y I TL ++E+ + + Sbjct: 82 -WVLLPIAGLIGGVIAALVGLATLRLSGVYFVIFTLGLAEMTRQAV-------------- 126 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 T ++ + + +Y+ LLG+ L + + R+ + A R Sbjct: 127 ---------TWYQNQTGHKGTYVLTELTDPDIYWQLLGLAALVFLLGWAIGRSKLGFALR 177 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIVI 270 I D++ + +K++ F VS A + GA A I P F + V+ Sbjct: 178 IIGDDEDVARHVGINTALSKIALFVVSGATAAIVGAMIAPRYIYIEPATAFTPMLSFQVV 237 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 + +LGG L + E LL + + L Sbjct: 238 IMALLGGTGRLWGPLVGVIPFTLLWEAISSSFPNQTTLLLGLSFLAIVYLLPGGFVGL 295 >gi|170743713|ref|YP_001772368.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168197987|gb|ACA19934.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 317 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 126/310 (40%), Gaps = 33/310 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 Y + + ++ + A GL+++VG G + + + IGAY+ + + L Sbjct: 21 PAFVGNYWLRVLTTVFMFGVVAQGLNVIVGFAGYHAFGNSVFFGIGAYAAGVGMTLG-LP 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 +W+ +PV+ +++ I+G P L+ RG Y AIAT+ ++ +I +T G G+ Sbjct: 80 VWIAVPVAVLVATLVAAILGWPLLRLRGHYFAIATVALNAAATEAIINIGGVTGGAQGLP 139 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + +Y+ +L L+ ++ WL R+ + A R Sbjct: 140 LPFSA-----------------LPPTTLYRIIYFAMLAALVLATGVVFWLSRSRLGYALR 182 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIVI 270 +RD++ + + AK+ A+ +S+A G G +A I F S ++ Sbjct: 183 ALRDSEDGAEVMGVDTVRAKILAWMISAAMTGAVGGLWAYWLTFIEVGTAFDVSISVRGY 242 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +++LGGM ++ A+ V + F+ H L+ + Sbjct: 243 IMMLLGGMGTVIGPVIGAALFQLVGD--------------AIWSHFSGIHNLLLGALVMA 288 Query: 331 VILMRSHSLL 340 V+LM LL Sbjct: 289 VVLMVPRGLL 298 >gi|300787991|ref|YP_003768282.1| branched-chain amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299797505|gb|ADJ47880.1| permease component of ABC-type branched-chain amino acid transport system [Amycolatopsis mediterranei U32] Length = 322 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 99/315 (31%), Gaps = 31/315 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY + A G ++V G L L++ + IG + + + + S +++ + AMI Sbjct: 17 LVLGSIYALVALGYTMVYGVLRLINFAHSEIFMIGTMTSLFILASIATSGHIVLGLGAMI 76 Query: 103 ---------------SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 A + + +A LI + L + + Sbjct: 77 LLLLALMLASALLSGGSAVVLEQVAYRPLRKRGSSKLAALISAIGASIFLQELFALVIIP 136 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 + R+ FP + V++G + + +RRT I Sbjct: 137 NVFGKSGRVPQNAPRFVDRDTL--FPVGNAVVRTDQVLVIIGAVIVMVVLDQLVRRTRIG 194 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 R + +A + +I F + A G+A A + + + F I Sbjct: 195 RGIRATAQDPEAAVLMGVSIDRIVRITFLLGGAMAGVASALYLMELEN-TGYRVGFVLGI 253 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ +L +L V + + F + Sbjct: 254 KAFTAAVLGGIGNLRGALLGGIVLGLVENWSAIFLGSEWKDVTAF-------------VV 300 Query: 328 LFLVILMRSHSLLRL 342 L LV++ R +L Sbjct: 301 LVLVLMFRPTGILGE 315 >gi|17548058|ref|NP_521460.1| transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17430364|emb|CAD17129.1| probable transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 313 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 108/316 (34%), Gaps = 26/316 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y M + GL+++ G L +++ + +GA + S Sbjct: 22 IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 81 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 L W+++ + + G G+++ L+F + L+++ ++ G Sbjct: 82 YLDLPYWVMLVAAPLAVGVVGVVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAVYG 141 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G+ + G T F++ + +V++ + + + +T + Sbjct: 142 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVVASLTVCFATWFMIEKTKL 191 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + + Sbjct: 192 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 249 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ L + L + + +T++ + Sbjct: 250 ITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVV--------------YPQASSTVVFV 295 Query: 327 ALFLVILMRSHSLLRL 342 + LV+L+R L Sbjct: 296 IMALVLLVRPAGLFGR 311 >gi|194336883|ref|YP_002018677.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1] gi|194309360|gb|ACF44060.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1] Length = 289 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 94/305 (30%), Gaps = 25/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S + +Y + G+S+V G + + + +G Y + + +L + + Sbjct: 7 LLSGILTGGVYALAGIGMSLVFGVMNISNFAHGDLMMLGMYLAYFAFTLLHIDPYLSLVL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ G ++ + + ++++ I+ + Sbjct: 67 IMPVAFLFGFMLEKLFINRVIHHPHQNQILLTVGLGLIMSNTALL----------AFTSD 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S + + + L C ++A + L+L +T+ A R N++ Sbjct: 117 PKILTTSYSSSAYNLPGGIFLSVPLVISFLITCGITALLSLFLLKTSTGMALRATSQNRE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + AF + +A AGA A + F +I +LGG+ Sbjct: 177 AAQLMGINVAKMSAIAFGIGTALAATAGALIAPTYYIHPLAGHSFLL--KAFTICVLGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ V + + ++ F + R Sbjct: 235 GSVIGAGVGGLIIGVVEAMSSTYISTDWKDVVVFVLFLAVLLL-------------RPQG 281 Query: 339 LLRLR 343 L + Sbjct: 282 LFGKK 286 >gi|172037859|ref|YP_001804360.1| branched-chain amino acid ABC transporter permease [Cyanothece sp. ATCC 51142] gi|171699313|gb|ACB52294.1| branched-chain amino acid ABC transporter permease protein [Cyanothece sp. ATCC 51142] Length = 294 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 84/292 (28%), Gaps = 12/292 (4%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + + + + + A GL++ G L L + +GAY + ++ Sbjct: 10 TAQNLFDGLAIGSVIALAAVGLTLTYGILRLSNFAHGDFMTLGAYLTWLANTQGLNLGLS 69 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 +I + A + L R TLI+ I + ++ + Sbjct: 70 VIIGAMGTVLAMLVSEYLLWKPMRDRRATSTTLIIISIGLALFLRNGILM---------- 119 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 ++ + + + ++ A + L L+ T I A R + Sbjct: 120 -IWGAKNQRYDIPLVQAQKLFGLQLATDRIWAIILSIVAIAILHLVLQNTKIGKAMRAVA 178 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 DN + L + +++ + G + + + + + VI Sbjct: 179 DNIDLARVSGINVEQVVLWTWVITAILTTLGGVMLGLITSTV-RPNMGWFLILPMFASVI 237 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 LGG+ + ++ EL + + + I Sbjct: 238 LGGIGNPYGAIAGGLVIGVAQELSVPWLGPDYKLGVALLIMILILLIRPQGI 289 >gi|38374232|gb|AAR19311.1| putative branched-chain amino acid transporter permease protein [symbiont bacterium of Paederus fuscipes] Length = 307 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 90/305 (29%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y +G+Y I + + +P+ Sbjct: 11 LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMLGSYIAFIAITLLAMLGLDNVPL 70 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + +I+ I I + + Sbjct: 71 LMLAAFTASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSFFLQNAVMLSQDSKEK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + F + V+ + + + + L++ R+ + A R ++ Sbjct: 131 AIPALLPGSFVFGESSMNGVVISYMQILIFIVTFLVMFGLTLFISRSRLGRACRACAEDL 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A I+ F I + +LGG Sbjct: 191 KMADLLGINSNNVIAFTFVIGAALAAVAATLLGMLYGVIN-PGIGFLAGIKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L M + ++ F L LV+L R Sbjct: 250 IGSIPGAMLGGLLLGVTEAFGADMFGDQYKDVVAFG-------------LLILVLLFRPT 296 Query: 338 SLLRL 342 +L Sbjct: 297 GILGR 301 >gi|146306418|ref|YP_001186883.1| inner-membrane translocator [Pseudomonas mendocina ymp] gi|145574619|gb|ABP84151.1| L-leucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein [Pseudomonas mendocina ymp] Length = 307 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 86/290 (29%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y + + + +P Sbjct: 11 LLNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFTVIAGLAMFGLEAVPF 70 Query: 99 SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + A MI+ I I + + Sbjct: 71 VMIAAFAATMIVTSAYGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVLLSQDSKDK 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + + ++ V+ + + + L++ R+ + A R ++ Sbjct: 131 AIPSLLPGNFILGESAANGVVVSYMQVLIFIVTFVAMIGLTLFISRSRLGRACRACAEDL 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +A + I+P F I + +LGG Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAIASVLLGMNYGVINPH-LGFLAGIKAFTAAVLGG 249 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + S+ +L + + ++ F + I Sbjct: 250 IGSIPGAVLGGLLLGVAEAFGADIFGDQYKDVVAFSLLVLVLLFRPTGIL 299 >gi|194435796|ref|ZP_03067899.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli 101-1] gi|194425339|gb|EDX41323.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli 101-1] gi|323970054|gb|EGB65329.1| branched-chain amino acid transport system/permease component protein [Escherichia coli TA007] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVVALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|99080210|ref|YP_612364.1| inner-membrane translocator [Ruegeria sp. TM1040] gi|99036490|gb|ABF63102.1| inner-membrane translocator [Ruegeria sp. TM1040] Length = 354 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 89/313 (28%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + L S + + Q+ I + A S+V+ + G + L+ Sbjct: 46 LIVLVLSIIIFGLLLGSKFFSPFALTLILQQVGIVGIVACAQSLVILTAG-IDLSVGAIM 104 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYGL L + + CG I G K + Sbjct: 105 VLSSVVMGQFTFRYGLPPTLGVACGLLCGTLCGYINGWLVAKMKLPPF------------ 152 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + I +Y A+ F F + Y ++ M L Sbjct: 153 IVTLGMWQIVLASNFLYSANETIRSQVIAEEAPFLQFFGEKFKVGGAVFTYGVIFMIVLV 212 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + LR TA + D++ A +S + +S AG Sbjct: 213 LVLAYVLRHTAWGRHVYAVGDDKDAAELSGVNTDKVLISVYMLSGLICAFAGWALIGRIG 272 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP + S + ++VI GG S+ I+ + + Sbjct: 273 SVSPTSGQLSNIESITAVVIGGISLFGGRGSVLGTFFGALIVGVFTLGLRLLGADAQWTY 332 Query: 310 LKFDCSFNMRHTT 322 L Sbjct: 333 LLIGVLIIAAVAV 345 >gi|294676777|ref|YP_003577392.1| urea ABC transporter permease UrtC [Rhodobacter capsulatus SB 1003] gi|294475597|gb|ADE84985.1| urea ABC transporter, permease protein UrtC [Rhodobacter capsulatus SB 1003] Length = 408 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 97/361 (26%), Gaps = 34/361 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L + +L G + + L + A + +V G +G+LSL + Sbjct: 18 LLALFTLTVTVLSNAYGLDLVSTSMVKTLGKTLCLCLIALAMDLVWGYMGILSLGHFAFF 77 Query: 75 AIGAYSYVIL-----------------------------GSRYGLSIWLLIPVSAMISGA 105 +G Y + +G+ +P +++G+ Sbjct: 78 GLGGYMIGMWLMVARSREIVLASAQGLPMTPQEMSDAIAAQIFGVVGASEMPAIWVLAGS 137 Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 + L + L L + + A + Sbjct: 138 LPAQLALVVIVPGLLALGFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSGLRGNNG 197 Query: 166 LIRFFRFPS----SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 L P ++ + L + R IRD++ Sbjct: 198 LSGLQNIPGLDGAGQDRLSVWFLWASALALGLGYLACAVTVSGKFGSVMRAIRDDEARVR 257 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 L + KL F +++ +AGA + I+P +I + V +GG L Sbjct: 258 FLGYPVEGYKLFVFTLTALIAAIAGALYYPQAGIINPAEVAPIASIYLAVWVAIGGRGRL 317 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 A + V G + + L+ ++ LV L L Sbjct: 318 WGAVIGAAFVSLVSTWFTGGRAPDLPMGF-YTVKWVDWWQVLLGLSFVLVTLFAPKGLSG 376 Query: 342 L 342 L Sbjct: 377 L 377 >gi|209920914|ref|YP_002294998.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli SE11] gi|300926849|ref|ZP_07142616.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 182-1] gi|301302339|ref|ZP_07208471.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 124-1] gi|301329774|ref|ZP_07222513.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 78-1] gi|307311878|ref|ZP_07591516.1| inner-membrane translocator [Escherichia coli W] gi|309794733|ref|ZP_07689155.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 145-7] gi|209914173|dbj|BAG79247.1| leucine ABC transporter ABC transporter permease component [Escherichia coli SE11] gi|300417108|gb|EFK00419.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 182-1] gi|300842502|gb|EFK70262.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 124-1] gi|300844189|gb|EFK71949.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 78-1] gi|306908022|gb|EFN38522.1| inner-membrane translocator [Escherichia coli W] gi|308121783|gb|EFO59045.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 145-7] gi|315062734|gb|ADT77061.1| leucine/isoleucine/valine transporter subunit [Escherichia coli W] gi|315256049|gb|EFU36017.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 85-1] gi|323376678|gb|ADX48946.1| inner-membrane translocator [Escherichia coli KO11] gi|324018696|gb|EGB87915.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 117-3] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTVFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|158316335|ref|YP_001508843.1| ABC transporter related [Frankia sp. EAN1pec] gi|158111740|gb|ABW13937.1| ABC transporter related [Frankia sp. EAN1pec] Length = 989 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 63/377 (16%), Positives = 135/377 (35%), Gaps = 45/377 (11%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 SI L + + ++ + F + + I L+ + A +V G Sbjct: 311 SIVQQTLGRAPRPKSMVLPGVVIAAAGFAALAATHGSHRAAIITTLVLAIIALSQVVVTG 370 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G +SL + +GA++ + + + + ++A+ + G+++GLP+L+ RG Sbjct: 371 FSGQISLAQLTLAGVGAFALTRIQHQLHVPFPIAPLLAAVFATIVGVVVGLPALRIRGLP 430 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 +A+ TL ++ + + + K + G G + D F + + Sbjct: 431 VAVTTLALAVVLEKLWFTNKDLNGGFNGSPIDDASIFGVNL--------GIGAGAGYPRL 482 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 L + L A ++ LRR+ + A +R N+++ + ++ KL AFA+ Sbjct: 483 TFGLFCLVVLLLVAGGVVLLRRSRLGAAMLAVRANERSAAASGISVSQVKLVAFAIGGFL 542 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI----------- 290 G+ GA A + + + + + L G+TS+S A I Sbjct: 543 AGLGGAMLAYQQTVADSSSYTAMGCVALFATAYLAGVTSVSGGINAGLIGAGGIIFTLVD 602 Query: 291 --------------------------LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 LI + G+ L + + +TT+ Sbjct: 603 KGLPLGVYVLLVGLPVLAIVAEIRPKLIPALSGVVGVLTLAAFLLHRDTVALGDYYTTVS 662 Query: 325 VIALFLVILMRSHSLLR 341 + L L +++ ++ Sbjct: 663 GVLLVLTVILNPEGIVG 679 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 29/295 (9%), Positives = 81/295 (27%), Gaps = 8/295 (2%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 ++ +Y GL + S G+++ AY+Y L L+ + Sbjct: 8 FLILGLGNGAVYAALGLGLVLTYRSSGVVNFATGAVALYTAYTYAFLRQGKLLNPIPGLT 67 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + +L + L + G+ + + Sbjct: 68 GTVDLGIDGMGFPAAFALSLVVAAALGSLLYAAVFRPMRAAPTAAKAVASIGVMIVMQAL 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIF------MYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + + + + + ++ ++ LW R T A R Sbjct: 128 LAVQVGTTAVSVAAILPTRIYTVAGQRVPGDRLWFAGIIIVMAVALTLWFRLTRFGLATR 187 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +++K + L +A+S+ G+ G A + + ++ Sbjct: 188 AAAESEKGALVTGLSPQRIALVNWALSTMIAGVGGILIAPIVPL--TPVSYTLFIVPALA 245 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 ++G T + A ++ + + + + + ++ Sbjct: 246 TALVGNFTRIGTAVSAGLVIGMLQSEATNLQTRSWLPSSGLAELVPLAVILIFLV 300 >gi|312174137|emb|CBX82390.1| branched-chain amino acid ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 95/312 (30%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y I+ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMLGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 V+ +I+ G + + K + LI + L + +T G Sbjct: 72 LIGCGFVVAVVIASCYGWSIERVAYKPVRSSKRLIALISAIGMSISLQNYVSLTQGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L V + ++ L++R + + A Sbjct: 129 ----RDLALPGLVSGQWTLGVSNGFAATISTMQLMIWGVTFLAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFLAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L + Sbjct: 244 TAAVLGGIGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIV 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|170759256|ref|YP_001785796.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A3 str. Loch Maree] gi|169406245|gb|ACA54656.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A3 str. Loch Maree] Length = 290 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 106/304 (34%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G L +L+ G + + + S + + + L I + Sbjct: 6 LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFVFFTMVSIFKIPLILAIVL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+G G+++ L + K A+A L+ S +L + G Sbjct: 66 TIVITGLIGILLYLIAYKPVLKGDAMAPLLSSLGVSIMLEALAQLIWGTE---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + + + ++ L L + ++ ++ I R + N+K Sbjct: 116 -IIPFPINIPKGTYSIASIKLSNIQIFIFLFSITLMIILYKFIMKSNIGLQIRALSYNRK 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F++++ ++G + D + M I + ILGG+ Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL L + + F I L LV++++ + Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280 Query: 339 LLRL 342 + Sbjct: 281 IFGE 284 >gi|160894349|ref|ZP_02075126.1| hypothetical protein CLOL250_01902 [Clostridium sp. L2-50] gi|156864050|gb|EDO57481.1| hypothetical protein CLOL250_01902 [Clostridium sp. L2-50] Length = 550 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 32/327 (9%), Positives = 83/327 (25%), Gaps = 9/327 (2%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 S F + Y I+ + + + + + I ++ Q + A G++ ++ Sbjct: 218 SQFLYKNGLYIVIILIFIALCIITPIVKNTQLLTVTNILNILQQASPRMFLALGVAGLIL 277 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 G L+ +G + I+ + + Sbjct: 278 LTG-TDLSIGRMVGMGMVTATIIMHNGPNTG--GVFGHIFDFSNISAAPRAILALVACII 334 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 L ++ F I+ + + + + V P+ F+ Sbjct: 335 LTTVFASIAGFFMAKYKMHPFISTMANMLIIFGLVTYATKGVSFGAIDSSIPNMFIPTFG 394 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 ++L + +T + N +A ++ L AF ++ Sbjct: 395 SFPSIILWAIVAIIVVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFKVTLGAFILAGIL 454 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVV 295 G + ++ I+ ++ GG+ +S + I + Sbjct: 455 YGFGSWLECNRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVLIFTSLT 514 Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + T Sbjct: 515 YSLTILGIDTNLQFIFEGIIILAAVTL 541 >gi|241663093|ref|YP_002981453.1| inner-membrane translocator [Ralstonia pickettii 12D] gi|240865120|gb|ACS62781.1| inner-membrane translocator [Ralstonia pickettii 12D] Length = 330 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 27/321 (8%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + L+ M + GL+++ +G+L+ Y +GAY ++ W + Sbjct: 22 NLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVVSGYL--GFWPALI 79 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 V+ ++ GA G ++ L+ Y +A L+ + ++ + + G L Sbjct: 80 VAPLLVGALGAVVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + V + F + + +++L + I L L RT I + + Sbjct: 131 AVPYRVPDALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +L + + F A G+AG ++ + IV + ++GG Sbjct: 191 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 248 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL------- 330 M SL A+ ++ + ++ + L K + N + V L + Sbjct: 249 MGSLVGAFVASLLIGCIQTFAVTLDISVTSVLGKIGVTLNPDVPLISVWNLTIAQVAPVL 308 Query: 331 -------VILMRSHSLLRLRT 344 +++ R L+ R Sbjct: 309 PYLLLVLMLIFRPRGLMGTRE 329 >gi|89054649|ref|YP_510100.1| inner-membrane translocator [Jannaschia sp. CCS1] gi|88864198|gb|ABD55075.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Jannaschia sp. CCS1] Length = 336 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 32/334 (9%), Positives = 85/334 (25%), Gaps = 19/334 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY----- 81 FL + I + A G++++ G L + A G Sbjct: 3 FLNALVALTNFVIVPATAYGAQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVTIFGTW 62 Query: 82 ----VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + + + +P+ ++ A + +F A + + + Sbjct: 63 GLQAAGVSFGPLPTALIALPLGIAVTAALMIGTDRVVYRFYRTQKAKPVIFVIASLGVMF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + R + + ++ + Sbjct: 123 IMNGIVRFFIGVDDQRFSDGERFIIRARDFREMTGLDEGLAFRTTQGITIVVAIIAVVLL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L RT + R DN+ L + + +A AG + + Sbjct: 183 FWFLNRTRTGKSMRAFSDNEDLALLSGINPDRVVLVTWIIVAALATTAGVLYGLDKSF-- 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG--------VVELCCGMNFYYFNSL 309 F + + + I+GG+ + ++ ++ + + Sbjct: 241 KPFTYFQLLLPIFASAIVGGLGNPLGAILGGFLIAFSEVGVTYAFRKVVGYLGPEDWQPD 300 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + L +V+L + +++ + Sbjct: 301 GLLQLLSTDYKFAVSFGILLIVLLFKPTGIMKGK 334 >gi|37676230|ref|NP_936626.1| ribose ABC transporter permease protein [Vibrio vulnificus YJ016] gi|37200771|dbj|BAC96596.1| ribose ABC transporter, permease protein [Vibrio vulnificus YJ016] Length = 328 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 32/312 (10%), Positives = 97/312 (31%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 30 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 88 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + ++ + + + +P + + + G I G+ K + + M+ Sbjct: 89 LCG-AFAASLVAMEVPVLIAVPTALLAGASLGAISGVIIAKGKVQAFIATLVTMT----- 142 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G +Y R G T + + + + ++ +++ Sbjct: 143 -------LLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWY 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + T + N+ A + K+ +A+ +AG + Sbjct: 196 LL----NHTRFGRYVYALGGNESATRLSGINVDKVKIGVYAICGLLAALAGIIVTSRLSS 251 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 252 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 311 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 312 AKAAVILLAVMV 323 >gi|46202169|ref|ZP_00053653.2| COG0559: Branched-chain amino acid ABC-type transport system, permease components [Magnetospirillum magnetotacticum MS-1] Length = 288 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 103/306 (33%), Gaps = 26/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + L+Y + A GLS++ G + +++ A+ Y+ L S L + +P+ Sbjct: 9 IVTGLLTGLVYSLMALGLSVIFGVVRVVNFAHGEMTALAMYAAWALFSWLELDPLIGLPL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A++ A G +M + I+ +++ + G + Sbjct: 69 IALLLFALGYVMQRGLIDAFVSKPEHMQFILLVAVAIVMVNGSLLVFGPDAHGIQVP--- 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + ++ + + +S ++L+ R T A R DN Sbjct: 126 --------YGFDTYEVGPLLVDKVRLLAAVAALAISGLLMLFFRHTMTGKAIRACADNLV 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + SA +G AGA A D ++ IVI+GG+ Sbjct: 178 GAKVIGLNVKQLYAVTFGIGSACVGAAGALLAMLIDV--MPSSGPELTMLAFIIVIVGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ L S+ F L LV+++R Sbjct: 236 GSMGGALLGGILIGISEVLAGYFLMPSMKSMFSF-------------AILILVLILRPQG 282 Query: 339 LLRLRT 344 L+ R Sbjct: 283 LMGARK 288 >gi|323959691|gb|EGB55342.1| branched-chain amino acid transport system/permease component protein [Escherichia coli H489] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 98/314 (31%), Gaps = 29/314 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRLRT 344 V+L+ +L Sbjct: 291 VLLVMPTGILGRSE 304 >gi|260424836|ref|ZP_05733429.2| amino acid ABC transporter, permease protein LivH [Dialister invisus DSM 15470] gi|260403329|gb|EEW96876.1| amino acid ABC transporter, permease protein LivH [Dialister invisus DSM 15470] Length = 310 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 96/304 (31%), Gaps = 27/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G L ++++ + IGAY ++L + G++I+ + Sbjct: 23 LVNGLTLGSAYAVIAIGYTLVFGVLNIVNMAHGGIFMIGAYIGLLLVTEAGMNIFPALAG 82 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G + L + + +A LI + L + G Sbjct: 83 AMIGGAVLGYGLELLALRPLRKHKATHLAPLISTIGVSTFLESVALMVWGPQTRS----- 137 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 S L L + + L RT + A R +N Sbjct: 138 ------FPSAFGNELMDMGVFKISGIQIISLGTAVVLMVLLTVMLNRTKVGKAIRATSEN 191 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++SA AG S + I P M S + ++++I+G Sbjct: 192 AETAGLLGINTGRIITLTVMLASALGAAAGVLIGLSFNAIEPTM-GTSMGLKGLAVLIMG 250 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ IL + + F + L++ +R Sbjct: 251 GLGNVEGAMAGGFILGIAEVFSVAYGTSSYRDAVAFG-------------LIILILFIRP 297 Query: 337 HSLL 340 L Sbjct: 298 EGLF 301 >gi|254487704|ref|ZP_05100909.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] gi|214044573|gb|EEB85211.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] Length = 336 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 34/331 (10%), Positives = 86/331 (25%), Gaps = 19/331 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 FL + + + A G+++V G L + A+GA S V++ Sbjct: 3 FLNALVALANYVLVPGIAYGSQLALGALGVTLVYGILRFSNFAHGDTMALGAMSAVLITW 62 Query: 87 RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + + +P + +I+ + +F + A + + Sbjct: 63 GFQAMGLHLWVLPTALIALPFAILITIGLLLGTDRMVYRFYREKKAKPVIFVIVSLGITF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + + ++ + A + Sbjct: 123 IYNGITRFIIGSDDQNFADGERFIISARTFKKMTGLEEGLAIKTTQGLTVITAIIVVAVL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L +T + R DN+ + + + + AG + + Sbjct: 183 FWFLNKTRSGKSMRAYSDNEDLALLSGINPERVVMITWIIVACLATTAGVLYGLDKSF-- 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309 F + + + I+GG+ + ++ + M Sbjct: 241 KPFTYFQLLLPIFAAAIVGGLGNPVGAIAGGFVIAFSEVTITYAWKKVLGYMMPAGLEPD 300 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + L +V+L + L Sbjct: 301 GLVQLMSTDYKFAVSFVILLIVLLFKPTGLF 331 >gi|167770133|ref|ZP_02442186.1| hypothetical protein ANACOL_01476 [Anaerotruncus colihominis DSM 17241] gi|167667455|gb|EDS11585.1| hypothetical protein ANACOL_01476 [Anaerotruncus colihominis DSM 17241] Length = 303 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 90/309 (29%), Gaps = 26/309 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + Y + A G S+V G L L + + YA GA+ V + + Sbjct: 18 LFNGLALGMAYALIAVGYSLVFGILRLTNFSHGSIYAFGAHMAVSFVGFQFGLFFAIALA 77 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAI-ATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + ++ R A+LI + I+ I G Sbjct: 78 IILTGILDILVDKAALAPLRKKNSMPIASLITTIGISQIIQNLLTIIYGSQ--------- 128 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + +L F + + + L + + +T I A R N Sbjct: 129 --RRSFPALFDFGMISIGSIQIHSTQLMMCVVSLILLLVLTAIIEKTKIGLAMRATEQNT 186 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 KA + + F F ++ A +AG+ + + P M F + + ILGG Sbjct: 187 KAASLMGINVNFVISVTFFLTGASAAIAGSLISGYYQIVYPTM-GFMAGLKAFAAAILGG 245 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + SL ++ L + + F + R Sbjct: 246 IGSLPGAVIGGLVVGVSESLGATFLGSTYRDSIAFIILIIVLIV-------------RPT 292 Query: 338 SLLRLRTPS 346 L + + Sbjct: 293 GLFGKKAIT 301 >gi|162456594|ref|YP_001618961.1| branched-chain amino acid ABC transporter,permease protein [Sorangium cellulosum 'So ce 56'] gi|161167176|emb|CAN98481.1| branched-chain amino acid ABC transporter,permease protein [Sorangium cellulosum 'So ce 56'] Length = 294 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 94/306 (30%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--YVILGSRYGLSIWLLI 96 + + Q + + A G ++V G L L++ + +GA++ + I + Sbjct: 8 LITGLAQGSMIALVALGYTMVYGILKLINFAHSEIFMMGAFAGLFGIAAFGGDSAPLFAG 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + A ++G+ K L ++ L+ ++ + Sbjct: 68 VAGTLCAMAFAGVLGVVVEKVAYAPLRSRGRGLANTRITPLVTALGMS-----------V 116 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +R + E + + + + L +RRT A R + N Sbjct: 117 LLQNLAQLLFTARYRGYPQLLPIEHTRQVIFVTSILVMIGLELLVRRTWTGKAMRALSVN 176 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +A + F S + + + ++ P M ++G Sbjct: 177 VEAARLMGVRTSRIIALTFLTGSMLAAVGAVLYCLDQSQVYPTM-GVVIGNRAFVAAVIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +++ ++ + E+ ++ L+ L V+L++ Sbjct: 236 GIGNITGAMLGGMLIGIIGEMTK-------------LTPYSGLQDVLVFAVLIGVLLVKP 282 Query: 337 HSLLRL 342 LL Sbjct: 283 TGLLGT 288 >gi|153011737|ref|YP_001372951.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] gi|151563625|gb|ABS17122.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] Length = 326 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 139/338 (41%), Gaps = 22/338 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + K + LA+++ + L + Y + + + + G+ + +G Sbjct: 2 TKTTKLIGVAAFLALIFIGIPVLIETTGRHDLYYT--LTSVALLSIVSGGVWLTF-YIGR 58 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 +++ +G Y IL +YG+S WL +P++ + +++G+P L+ RG Y A+ Sbjct: 59 INIGQGAYALMGGYVSAILMVKYGVSFWLTLPLAGLFCAFASILIGIPILRLRGVYFAMV 118 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL+++E+ + + + ITNG G+ + +++ F + Y+ Sbjct: 119 TLVLTEVARLLAMALP-ITNGAKGMVSIPMPGGISLFGLTILPDFATLQNP---RAAFYF 174 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 V + + L + + L + I ++++ N++ S+ I ++ A+A+SS G+ Sbjct: 175 VSIVLMVLCFAGLYRLINSRIGGLCQSLQQNEELASSIGVNITNLRVLAYAISSFLGGLG 234 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA F A I P F ++++ + LGG+ + T +L + Sbjct: 235 GAMFVAISQSIYPSSFTVTDSVNFMLNCFLGGLGYVFGPIIGTFVLYFGWDFL------- 287 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + L +++L + LL LR Sbjct: 288 --------FQTGKFQLLIFSSVLIILMLFLPNGLLSLR 317 >gi|121607164|ref|YP_994971.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121551804|gb|ABM55953.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 320 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 102/278 (36%), Gaps = 12/278 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + + I +FA L +++G G++SL + +G Y+ + + + V Sbjct: 37 IINTMAITALFALSLDLILGYAGIVSLGHAAFFGLGGYAAALFAKHVMPDPLVGLVVGMG 96 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + G + L L+ + TL + + + ++ +T G G+ Sbjct: 97 AATLLGAVASLTILRGTDLTRLMVTLGVGLVLLELANRFDALTGGADGLQGV-------- 148 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 ++ F + + L + L + + ++ + IRDN+ Sbjct: 149 ----VLGPVLGRFEFDLSGRTAAWYSLSLLLLFFLLARRIVQSPFGATLKAIRDNRLRAM 204 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 ++ + + +++A G AGA + S D+F+F + V+ I+++GG+ L Sbjct: 205 AIGIPVTLRLAQVYTLAAALAGAAGALHTQTTGFASLDLFEFHRSADVLLILVIGGVGWL 264 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 A L+ + + + Y+ + + Sbjct: 265 YGGILGAAGLMLLQDRISSVTPQYWMFWIGLFLVLLVL 302 >gi|124268942|ref|YP_001022946.1| putative branched-chain amino acid transport permease [Methylibium petroleiphilum PM1] gi|124261717|gb|ABM96711.1| putative branched-chain amino acid transport permease [Methylibium petroleiphilum PM1] Length = 327 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 125/333 (37%), Gaps = 16/333 (4%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ LF+ + + +++L Y +FA ++++G GLLS AY Sbjct: 8 LLGYAALFIAIALLPALGAYPIFVMKVLCYALFACAFNLLIGFTGLLSFGHAAFLGAAAY 67 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +G L + A ++ G+ G +++ G Y ++ TL ++++ ++ Sbjct: 68 GAGHALKVWGFPAPLGLLFGAAVAALAGLAFGWLAIRRSGIYFSMITLALAQMLFFFFLQ 127 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 T G+ G+ R RF + ++ +YYV+L + +I Sbjct: 128 AP-FTGGEDGLQSVPR--------------GRFLGLDLANDLTLYYVVLAIFIAGFWLIY 172 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + +IR+N+ SL + KL AF +S+A G+AGA + Sbjct: 173 RTVHSPFGQVLTSIRENEARATSLGYDVERFKLVAFVLSAALAGLAGATKTLVLGFATLT 232 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNM 318 ++ + VI + ++GGM ++ +++ + + + + + Sbjct: 233 DAVWTTSGAVILMTLVGGMGTMVGPMVGALVIVALENKIGDVGRALAELTGIAWFNGLGE 292 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 T + + L +L ++ R Sbjct: 293 AVTLVTGLIFILCVLAFRRGIVGEAGALLARWR 325 >gi|327485354|gb|AEA79760.1| Ribose ABC transport system, permease protein RbsC [Vibrio cholerae LMA3894-4] Length = 326 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|310765694|gb|ADP10644.1| branched-chain amino acid transporter permease subunit LivH [Erwinia sp. Ejp617] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 102/308 (33%), Gaps = 21/308 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI----WL 94 + + Y + A G ++V G +G+++ Y IG+Y I+ + + WL Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTSWL 71 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 LI +++ G + + + +++ I + + Sbjct: 72 LIGCGFVVAVVIASCYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 L L +L F ++ ++ ++ V ++ L++R + + A R Sbjct: 132 ALPSLVAGQWTLGISNGFAATISTMQLVIWGVTFIA---MLALTLFIRYSRMGRACRACA 188 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 ++ K L F + +A +AG I+P F + + + Sbjct: 189 EDLKMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFLAGMKAFTAAV 247 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 LGG+ S+ IL L + ++ F L +V+L+ Sbjct: 248 LGGIGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLV 294 Query: 335 RSHSLLRL 342 +L Sbjct: 295 MPTGILGR 302 >gi|319791507|ref|YP_004153147.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315593970|gb|ADU35036.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 326 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 118/328 (35%), Gaps = 29/328 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + +L + + + L + A +I+ G G S + + Sbjct: 8 LAGIALFAVLVACVPFVTKSGVTLNFVMMALYATLIAQAWNILGGFGGQFSFGHALFFGT 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134 GAY I + G++ W+ +P++ + + G+ MG + + +G Y A+ TL +E+F+ Sbjct: 68 GAYIQAIAQLQGGINAWVALPLAIVGAALVGLFMGALTFRYGLKGSYFALVTLAFAEVFR 127 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + G + + +V+L M + Sbjct: 128 ILALSVDFTGGGVGLMV---------------PLRESVANLQFSSRAGYLWVVLAMVVAA 172 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + WLR + +RDN+ A ++ KL A +S+AF+G AGAF+ Sbjct: 173 LLVTWWLRNGRFGAYLQAVRDNEDAARAVGVNPFRVKLGAIGLSAAFMGAAGAFYVQVFQ 232 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I + + +I + I+GGM ++ +L + +L + Sbjct: 233 YIDAGIAYGPAVSIEALVAAIVGGMGTMWGPVLGAVVLHVLSDLTRNLFG---------- 282 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + L L+++ + Sbjct: 283 -ELPGINMVIYGTVLVLIVIFVPRGIAG 309 >gi|299065176|emb|CBJ36341.1| putative Branched-chain amino acid transport system permease, membrane component (livH) [Ralstonia solanacearum CMR15] Length = 313 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 107/316 (33%), Gaps = 26/316 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y M + GL+++ G L +++ + +GA + S Sbjct: 22 IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 81 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 L W+++ + + G G+++ L+F + L+++ ++ G Sbjct: 82 YLDLPYWVMLLAAPLAVGVVGVVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAVYG 141 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G+ + G T F++ + +V+ + + + +T + Sbjct: 142 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVAASLTVCFATWFMIEKTKL 191 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + + Sbjct: 192 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 249 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ L + L + + +T++ + Sbjct: 250 ITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVV--------------YPQASSTVVFV 295 Query: 327 ALFLVILMRSHSLLRL 342 + LV+L+R L Sbjct: 296 IMALVLLVRPAGLFGR 311 >gi|326318477|ref|YP_004236149.1| urea ABC transporter permease UrtC [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375313|gb|ADX47582.1| urea ABC transporter, permease protein UrtC [Acidovorax avenae subsp. avenae ATCC 19860] Length = 390 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 92/314 (29%), Gaps = 30/314 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 A LL + L + + + L+Y M +++ G G+L+L + + Sbjct: 9 ATFAAYGAFLLLVALAPLVLDPFWLNRIAKYLVYGMLGVAIALGWGYAGILNLGQGLFFG 68 Query: 76 IGAYSYVILGS-------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 +GAY + + A++ C F+ Sbjct: 69 LGAYMLAMALKLASPASQQPGAHGPVPDFMLSNAEPGAIVDLCCINRGAFLWQPFQHQGF 128 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIY-----------------VADRLYFLGTTVRS 165 +A ++ + ++ AG++ A L + Sbjct: 129 GLAMGLLLPMAVAFVLGAVVFRKRIAGVFVSIITLAVVLLVRLLLVDAQPLTNGFNGLTD 188 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 L F + + YY++ G + L T + ++ L Sbjct: 189 LAWLRIGGLEFDPFGLPAYYLVAGTLAVVLVGTRLLVATRAGLILKAAGEDPLRARYLGF 248 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 + + F +S+ +AG + + SP + +I ++ +GG +SL Sbjct: 249 DVAHYQTFFFTLSAGIAAVAGMLYVVVAEFASPSFMDLAFSISMVVWAAVGGRSSLLGAC 308 Query: 286 KATAILIGVVELCC 299 ++ + Sbjct: 309 LGAILINLLEATAS 322 >gi|114706263|ref|ZP_01439165.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506] gi|114538124|gb|EAU41246.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506] Length = 308 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 96/307 (31%), Gaps = 15/307 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + ++ + A GL+++ G + L++L + Y +GAY + + G L Sbjct: 10 LNGIQFGILLFLVAAGLTLIFGIMDLINLAHGVLYMVGAYFVAMFTAMTGDFFLGLAIAL 69 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ L + L + + K I + Sbjct: 70 PAALLFGILLEILIFRRLYERDHLDQVLATFGLILILNEGVKMIWGAAPMSVQIPAILSG 129 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + FV Y IF +++ + + + + T R + Sbjct: 130 SVPL----------IGFVQYPIFRIAIIVAGLATALGLYVLVNHTRTGMLLRAGATDGPM 179 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L I + F + + G AGA A S I+ ++++GG+ Sbjct: 180 VSALGVDIKRLFMLVFGLGAMLAGFAGAMVAPILSV--EPGMGDSILILTFVVIVIGGVG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336 S+ A ++ V L S + + T L+ I + +V+ +R Sbjct: 238 SVRGAFVAAILVGLVDTLGRTFGPILLRSAMDASAAGQAGRTLAPMLIYILMAVVLFLRP 297 Query: 337 HSLLRLR 343 L R Sbjct: 298 SGLFPAR 304 >gi|271502543|ref|YP_003335569.1| inner-membrane translocator [Dickeya dadantii Ech586] gi|270346098|gb|ACZ78863.1| inner-membrane translocator [Dickeya dadantii Ech586] Length = 308 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 ++ +++ + I I + R Sbjct: 72 LIGVAFIAAVVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLMQGSRDV 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + ++ + + ++ L++R + + A R ++ Sbjct: 132 ALPSLIQGQWVLGESNGFAATLSAMQLTIWVVTFLAMLALTLFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L + F + +A +AG I+P F + + +LGG Sbjct: 192 KMASLLGISTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMIGGLILGIAESLTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|170289455|ref|YP_001739693.1| inner-membrane translocator [Thermotoga sp. RQ2] gi|170176958|gb|ACB10010.1| inner-membrane translocator [Thermotoga sp. RQ2] Length = 299 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 96/311 (30%), Gaps = 18/311 (5%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + + + + +Y + A G ++V G L L++ +G Y + L+ Sbjct: 2 VFFLQNLFNGIMLGGLYALIAIGYTMVYGILRLINFAHGDVMMMGVYFAFYAATLLSLNP 61 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 V+ + + G ++ + K + I+ LI + L + G Sbjct: 62 LFSAIVAILGAALLGFLIDRVAYKPLRNAPRISALITAIGVSFFLESLAVVVFGAI---- 117 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 FL I + + + V+ + + + RT I A R Sbjct: 118 --PKSFLKVFKDRTILNKVLTVAGARIPLLTFLVIFITVVILIVLFFIVYRTKIGMAMRA 175 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 I + + + FA+ SA +G +A + P M F + Sbjct: 176 ISMDIPTTALMGVNVDAVIGFTFALGSALAAASGIMWAMRFPNVHPYM-GFMPGLKAFIA 234 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 + GG+ S+ +L + + I L +++ Sbjct: 235 AVFGGIGSIPGAVLGGVLLGLIEIFLAAYFPAFMG-----------YRDAFAFIILIVIL 283 Query: 333 LMRSHSLLRLR 343 L++ LL + Sbjct: 284 LVKPSGLLGKK 294 >gi|54303227|ref|YP_133220.1| ribose ABC transporter permease protein [Photobacterium profundum SS9] gi|46916655|emb|CAG23420.1| Putative ribose ABC transporter, permease protein [Photobacterium profundum SS9] Length = 329 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 31/313 (9%), Positives = 84/313 (26%), Gaps = 25/313 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + ++ +++ + I ++ Q I + A G+++V+ + G + L+ A Sbjct: 31 LIALILLIVVVSFLNPNFFTVDNILNILRQTSINAIIAVGMTLVILTAG-IDLSVGSVLA 89 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + +I + + + + + + F Sbjct: 90 LCGAFAATMIGLEIPAIIAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 137 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T V +F + I V++ Sbjct: 138 TLVTMTLLRGVTMVYTDGRPISTGFTEVADGFAWFGTGYAMGIPVPIWLMVIVFASIWYL 197 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 198 L-----NHTRFGRYIYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 252 Query: 256 ISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 P + I+ V+LGG + I+ + ++ + + Sbjct: 253 AQPTA-GMGYELDAIAAVVLGGTSLAGGKGRIMGTLVGALIIGFLNNALNLLDVSSYYQM 311 Query: 310 LKFDCSFNMRHTT 322 + + Sbjct: 312 IAKAVVILLAVLV 324 >gi|15803967|ref|NP_290003.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O157:H7 EDL933] gi|15833558|ref|NP_312331.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O157:H7 str. Sakai] gi|16131329|ref|NP_417914.1| leucine/isoleucine/valine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|74314057|ref|YP_312476.1| branched-chain amino acid transporter permease subunit LivH [Shigella sonnei Ss046] gi|82545818|ref|YP_409765.1| branched-chain amino acid transporter permease subunit LivH [Shigella boydii Sb227] gi|89110555|ref|AP_004335.1| leucine/isoleucine/valine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|157155414|ref|YP_001464919.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli E24377A] gi|157162933|ref|YP_001460251.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli HS] gi|168747053|ref|ZP_02772075.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4113] gi|168753221|ref|ZP_02778228.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4401] gi|168759491|ref|ZP_02784498.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4501] gi|168765816|ref|ZP_02790823.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4486] gi|168772638|ref|ZP_02797645.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4196] gi|168779552|ref|ZP_02804559.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4076] gi|168785274|ref|ZP_02810281.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC869] gi|168797239|ref|ZP_02822246.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC508] gi|170018311|ref|YP_001723265.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli ATCC 8739] gi|170082971|ref|YP_001732291.1| leucine/isoleucine/valine ABC transporter membrane component [Escherichia coli str. K-12 substr. DH10B] gi|187733821|ref|YP_001882156.1| branched-chain amino acid transporter permease subunit LivH [Shigella boydii CDC 3083-94] gi|188494746|ref|ZP_03002016.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli 53638] gi|191167304|ref|ZP_03029121.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli B7A] gi|193061882|ref|ZP_03042979.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli E22] gi|193068803|ref|ZP_03049763.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli E110019] gi|194427004|ref|ZP_03059556.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli B171] gi|194431275|ref|ZP_03063568.1| high-affinity branched-chain amino acid transport system permease protein livH [Shigella dysenteriae 1012] gi|195934949|ref|ZP_03080331.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O157:H7 str. EC4024] gi|208807113|ref|ZP_03249450.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4206] gi|208813998|ref|ZP_03255327.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4045] gi|208819102|ref|ZP_03259422.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4042] gi|209400625|ref|YP_002272898.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4115] gi|217326366|ref|ZP_03442450.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. TW14588] gi|218556006|ref|YP_002388919.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli IAI1] gi|218697140|ref|YP_002404807.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli 55989] gi|238902548|ref|YP_002928344.1| leucine/isoleucine/valine transporter subunit [Escherichia coli BW2952] gi|253771714|ref|YP_003034545.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038624|ref|ZP_04872680.1| high-affinity branched-chain amino acid transport system permease livH [Escherichia sp. 1_1_43] gi|254163381|ref|YP_003046489.1| branched-chain amino acid transporter permease LivH [Escherichia coli B str. REL606] gi|254795374|ref|YP_003080211.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O157:H7 str. TW14359] gi|256020803|ref|ZP_05434668.1| branched-chain amino acid transporter permease subunit LivH [Shigella sp. D9] gi|256025819|ref|ZP_05439684.1| branched-chain amino acid transporter permease subunit LivH [Escherichia sp. 4_1_40B] gi|260846241|ref|YP_003224019.1| high-affinity branched-chain amino acid transport system, membrane component [Escherichia coli O103:H2 str. 12009] gi|260857563|ref|YP_003231454.1| high-affinity branched-chain amino acid transport system, membrane component [Escherichia coli O26:H11 str. 11368] gi|260870182|ref|YP_003236584.1| high-affinity branched-chain amino acid transport system, membrane component [Escherichia coli O111:H- str. 11128] gi|261224738|ref|ZP_05939019.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261254367|ref|ZP_05946900.1| high-affinity branched-chain amino acid transport system, membrane component [Escherichia coli O157:H7 str. FRIK966] gi|291284795|ref|YP_003501613.1| High-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O55:H7 str. CB9615] gi|293416861|ref|ZP_06659498.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli B185] gi|293453762|ref|ZP_06664181.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli B088] gi|297521419|ref|ZP_06939805.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli OP50] gi|300822741|ref|ZP_07102878.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 119-7] gi|300917213|ref|ZP_07133894.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 115-1] gi|300931004|ref|ZP_07146362.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 187-1] gi|300946796|ref|ZP_07161040.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 116-1] gi|300956791|ref|ZP_07169058.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 175-1] gi|301018541|ref|ZP_07182919.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 69-1] gi|301021804|ref|ZP_07185768.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 196-1] gi|301645898|ref|ZP_07245812.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 146-1] gi|307140139|ref|ZP_07499495.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli H736] gi|312972279|ref|ZP_07786453.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli 1827-70] gi|331644155|ref|ZP_08345284.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli H736] gi|331655037|ref|ZP_08356036.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli M718] gi|331670280|ref|ZP_08371119.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli TA271] gi|331679522|ref|ZP_08380192.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli H591] gi|332282008|ref|ZP_08394421.1| leucine/isoleucine/valine transporter subunit [Shigella sp. D9] gi|84027816|sp|P0AEX8|LIVH_ECO57 RecName: Full=High-affinity branched-chain amino acid transport system permease protein livH; AltName: Full=LIV-I protein H gi|84027817|sp|P0AEX7|LIVH_ECOLI RecName: Full=High-affinity branched-chain amino acid transport system permease protein livH; AltName: Full=LIV-I protein H gi|12518111|gb|AAG58564.1|AE005569_4 high-affinity branched-chain amino acid transport system; membrane component [Escherichia coli O157:H7 str. EDL933] gi|466593|gb|AAB18432.1| CG Site No. 552 [Escherichia coli str. K-12 substr. MG1655] gi|1789866|gb|AAC76482.1| leucine/isoleucine/valine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|13363778|dbj|BAB37727.1| membrane component of high-affinity branched-chain amino acid transport system [Escherichia coli O157:H7 str. Sakai] gi|73857534|gb|AAZ90241.1| high-affinity branched-chain amino acid transport system; membrane component [Shigella sonnei Ss046] gi|81247229|gb|ABB67937.1| high-affinity branched-chain amino acid transport system membrane component [Shigella boydii Sb227] gi|85676586|dbj|BAE77836.1| leucine/isoleucine/valine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|157068613|gb|ABV07868.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli HS] gi|157077444|gb|ABV17152.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli E24377A] gi|169753239|gb|ACA75938.1| inner-membrane translocator [Escherichia coli ATCC 8739] gi|169890806|gb|ACB04513.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|187430813|gb|ACD10087.1| high-affinity branched-chain amino acid transport system permease protein livH [Shigella boydii CDC 3083-94] gi|187771759|gb|EDU35603.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4196] gi|188018258|gb|EDU56380.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4113] gi|188489945|gb|EDU65048.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli 53638] gi|189002358|gb|EDU71344.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4076] gi|189358880|gb|EDU77299.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4401] gi|189364684|gb|EDU83103.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4486] gi|189369548|gb|EDU87964.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4501] gi|189374672|gb|EDU93088.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC869] gi|189379968|gb|EDU98384.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC508] gi|190902656|gb|EDV62388.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli B7A] gi|192932672|gb|EDV85269.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli E22] gi|192957879|gb|EDV88322.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli E110019] gi|194414965|gb|EDX31235.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli B171] gi|194420730|gb|EDX36806.1| high-affinity branched-chain amino acid transport system permease protein livH [Shigella dysenteriae 1012] gi|208726914|gb|EDZ76515.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4206] gi|208735275|gb|EDZ83962.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4045] gi|208739225|gb|EDZ86907.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4042] gi|209162025|gb|ACI39458.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. EC4115] gi|209756078|gb|ACI76351.1| membrane component of high-affinity branched-chain amino acid transport system [Escherichia coli] gi|209756080|gb|ACI76352.1| membrane component of high-affinity branched-chain amino acid transport system [Escherichia coli] gi|209756082|gb|ACI76353.1| membrane component of high-affinity branched-chain amino acid transport system [Escherichia coli] gi|209756084|gb|ACI76354.1| membrane component of high-affinity branched-chain amino acid transport system [Escherichia coli] gi|209756086|gb|ACI76355.1| membrane component of high-affinity branched-chain amino acid transport system [Escherichia coli] gi|217322587|gb|EEC31011.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O157:H7 str. TW14588] gi|218353872|emb|CAV00261.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218362774|emb|CAR00400.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|226839130|gb|EEH71153.1| high-affinity branched-chain amino acid transport system permease livH [Escherichia sp. 1_1_43] gi|238861640|gb|ACR63638.1| leucine/isoleucine/valine transporter subunit [Escherichia coli BW2952] gi|242378978|emb|CAQ33776.1| livH, subunit of branched chain amino acids ABC transporter and leucine ABC transporter [Escherichia coli BL21(DE3)] gi|253322758|gb|ACT27360.1| inner-membrane translocator [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975282|gb|ACT40953.1| leucine/isoleucine/valine transporter subunit [Escherichia coli B str. REL606] gi|253979438|gb|ACT45108.1| leucine/isoleucine/valine transporter subunit [Escherichia coli BL21(DE3)] gi|254594774|gb|ACT74135.1| leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257756212|dbj|BAI27714.1| high-affinity branched-chain amino acid transport system, membrane component [Escherichia coli O26:H11 str. 11368] gi|257761388|dbj|BAI32885.1| high-affinity branched-chain amino acid transport system, membrane component [Escherichia coli O103:H2 str. 12009] gi|257766538|dbj|BAI38033.1| high-affinity branched-chain amino acid transport system, membrane component [Escherichia coli O111:H- str. 11128] gi|260447527|gb|ACX37949.1| inner-membrane translocator [Escherichia coli DH1] gi|290764668|gb|ADD58629.1| High-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli O55:H7 str. CB9615] gi|291321888|gb|EFE61319.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli B088] gi|291431437|gb|EFF04422.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli B185] gi|299881437|gb|EFI89648.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 196-1] gi|300316430|gb|EFJ66214.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 175-1] gi|300399660|gb|EFJ83198.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 69-1] gi|300415496|gb|EFJ98806.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 115-1] gi|300453553|gb|EFK17173.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 116-1] gi|300461182|gb|EFK24675.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 187-1] gi|300524741|gb|EFK45810.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 119-7] gi|301075887|gb|EFK90693.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 146-1] gi|309703863|emb|CBJ03204.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|310334656|gb|EFQ00861.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli 1827-70] gi|315138031|dbj|BAJ45190.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli DH1] gi|320175713|gb|EFW50801.1| High-affinity branched-chain amino acid transport system permease protein LivH [Shigella dysenteriae CDC 74-1112] gi|320181949|gb|EFW56855.1| High-affinity branched-chain amino acid transport system permease protein LivH [Shigella boydii ATCC 9905] gi|320187777|gb|EFW62452.1| High-affinity branched-chain amino acid transport system permease protein LivH [Shigella flexneri CDC 796-83] gi|320191526|gb|EFW66176.1| High-affinity branched-chain amino acid transport system permease protein LivH [Escherichia coli O157:H7 str. EC1212] gi|320199633|gb|EFW74223.1| High-affinity branched-chain amino acid transport system permease protein LivH [Escherichia coli EC4100B] gi|320639739|gb|EFX09333.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O157:H7 str. G5101] gi|320645238|gb|EFX14254.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O157:H- str. 493-89] gi|320650549|gb|EFX19015.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O157:H- str. H 2687] gi|320655742|gb|EFX23665.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661525|gb|EFX28940.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O55:H7 str. USDA 5905] gi|320666548|gb|EFX33531.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O157:H7 str. LSU-61] gi|323154294|gb|EFZ40497.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli EPECa14] gi|323162696|gb|EFZ48535.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli E128010] gi|323164785|gb|EFZ50577.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella sonnei 53G] gi|323179017|gb|EFZ64591.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli 1180] gi|323182921|gb|EFZ68322.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli 1357] gi|323934557|gb|EGB30957.1| branched-chain amino acid transport system/permease component protein [Escherichia coli E1520] gi|323939325|gb|EGB35536.1| branched-chain amino acid transport system/permease component protein [Escherichia coli E482] gi|323944321|gb|EGB40396.1| branched-chain amino acid transport system/permease component protein [Escherichia coli H120] gi|324116345|gb|EGC10264.1| branched-chain amino acid transport system/permease component protein [Escherichia coli E1167] gi|326337574|gb|EGD61409.1| High-affinity branched-chain amino acid transport system permease protein LivH [Escherichia coli O157:H7 str. 1044] gi|326344675|gb|EGD68424.1| High-affinity branched-chain amino acid transport system permease protein LivH [Escherichia coli O157:H7 str. 1125] gi|331036449|gb|EGI08675.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli H736] gi|331047052|gb|EGI19130.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli M718] gi|331062342|gb|EGI34262.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli TA271] gi|331072694|gb|EGI44019.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli H591] gi|332085741|gb|EGI90905.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella dysenteriae 155-74] gi|332090525|gb|EGI95623.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Shigella boydii 3594-74] gi|332104360|gb|EGJ07706.1| leucine/isoleucine/valine transporter subunit [Shigella sp. D9] gi|332345411|gb|AEE58745.1| high-affinity branched-chain amino acid transport system permease BraD [Escherichia coli UMNK88] Length = 308 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|330951898|gb|EGH52158.1| inner-membrane translocator [Pseudomonas syringae Cit 7] Length = 300 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 92/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + V+ A GL+IV G +G++++ A+G+Y + + L+ +I Sbjct: 14 FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYMTYVTSVVFQRYFPELMGWYFII 73 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + + +L W + + Sbjct: 74 GIGMAFVVTFAFGLLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ S + + +++ ++A++ L+L R+ R + N+ + Sbjct: 132 TVQWLQGAWKISDGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AG+ F + + + +V+ GG+ SL Sbjct: 192 AGINTAGVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + + + +++ R + L Sbjct: 250 GTFLSAFAIGQTQVSLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296 Query: 343 R 343 + Sbjct: 297 K 297 >gi|300815341|ref|ZP_07095566.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 107-1] gi|300532233|gb|EFK53295.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 107-1] Length = 308 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 99/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+GA G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIAGAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|294791635|ref|ZP_06756783.1| branched-chain amino acid ABC transporter, permease protein [Veillonella sp. 6_1_27] gi|294456865|gb|EFG25227.1| branched-chain amino acid ABC transporter, permease protein [Veillonella sp. 6_1_27] Length = 293 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 100/308 (32%), Gaps = 27/308 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A GL++V G L ++++ + IGA+ + + + + ++I++ + V Sbjct: 6 LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFNVNIFVALIV 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G ++ + + +A LI + L + G Sbjct: 66 AMAVGAILGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + M + + + ++T I A R + + Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSVVLMLILNVVI-----------KKTKIGKAIRAVSMS 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++SA AG S + I P M ++++ILG Sbjct: 175 TETAALLGINPTMIISITVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +++ IL F + F + L++ R Sbjct: 234 GLGNITGAMVGGFILGVAEIFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280 Query: 337 HSLLRLRT 344 L + Sbjct: 281 QGLFGSKD 288 >gi|158423062|ref|YP_001524354.1| branched-chain amino acid uptake ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158329951|dbj|BAF87436.1| branched-chain amino acid uptake ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 332 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 113/304 (37%), Gaps = 27/304 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 ++ +++ L +V G G+ +L Y GAY+ I +RYG+ L + Sbjct: 43 LALLTRLIAIAFLVLSLDLVTGYCGVATLGHAALYGAGAYAAGIASARYGIEDPLAMTGI 102 Query: 100 AMIS-GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ G++ G+ L+ G + ++ + +F K T G G+ Sbjct: 103 GLVGGALAGLVCGVVILRAHGLPQLVLSIALVYLFHEFANKASGWTGGSDGLSGVTTGPL 162 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G F +Y Y +G+ L+ ++ L R+ R I+++ Sbjct: 163 FGR------------FEFDLYGHTAYLYAVGLLLLTLIVLRLLVRSPFGMLCRGIKEDPV 210 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ + A L + +S A G+ GA A S ++ D F+++ + +++LGG Sbjct: 211 RIQAMGASPKAALLKMYVISGAVAGIGGALNAISTQVVALDSLSFTQSAEALVMLVLGGT 270 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL T + + N +++ T++ + L +L Sbjct: 271 GSLFGALVGTVVFTLFEDFVSAANPFHW--------------LTVVGLLLIATVLFAPKG 316 Query: 339 LLRL 342 L Sbjct: 317 LYGT 320 >gi|330939913|gb|EGH43124.1| inner-membrane translocator [Pseudomonas syringae pv. pisi str. 1704B] Length = 269 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 72/277 (25%), Gaps = 14/277 (5%) Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 ++ Y I AY I + P + + +++ Sbjct: 1 INFAHGDVYMISAYLAAIGLAVLSFFGVESFPFLILGTLIFTIVVTGVYGFVIERVAYKP 60 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + I + T+ F S FV + Sbjct: 61 LRNSTRLAPLISAIGISLILQNYAQISQGARQQGVPTLLEGAWRFEVGSGFVQITYTKIF 120 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +L+ + ++ T + R + ++K L F + +A +A Sbjct: 121 ILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRKMASILGINTDRVISYVFIIGAAMAALA 180 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G + F I + +LGG+ SL IL G+ Sbjct: 181 GVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGIGSLPGAMLGGLILGVAESQFSGLINSD 239 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + F L L+++ R LL Sbjct: 240 YKDVFSFG-------------LLVLILIFRPQGLLGR 263 >gi|217978162|ref|YP_002362309.1| urea ABC transporter, permease protein UrtC [Methylocella silvestris BL2] gi|217503538|gb|ACK50947.1| urea ABC transporter, permease protein UrtC [Methylocella silvestris BL2] Length = 361 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 102/327 (31%), Gaps = 28/327 (8%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-- 87 L Y ++ + L + A GL ++ G G+LSL + + +G Y + + Sbjct: 22 LAPWLVSAYTLTLLGRFLAMSILAIGLVLLWGEAGILSLGQGVFFGLGGYVIAMNLKQAT 81 Query: 88 ---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---QN 135 S +P I + L + L+ Sbjct: 82 LGEGEIPDFMTWSGLDALPWWWTIFSHPLLATLGVILVPAAVGAVFSWLVFRRRVGGVYF 141 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 LI + + + F F + +Y+V + + + Sbjct: 142 ALITQALALCFATLLVSQQQYTGGFNGLTDFKTLFGFDLGAIGTIYTLYWVTVALVVAAF 201 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +I WL T R RD + L K+ AF +++AF G+AGA F Sbjct: 202 AITYWLLATRYGKLLRATRDGENRVRFLGYDPAPYKVIAFTIAAAFAGVAGALFTLHAGV 261 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +SP + +I ++ V +GG SL T I+ + + + Sbjct: 262 VSPALVGVVPSIEMVIWVAIGGRKSLWGAIAGTLIVNFARD--------------QISSA 307 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342 + +A LV+ L L Sbjct: 308 LPSLWLYALGLAFVLVVTFLPEGLAGL 334 >gi|157149040|ref|YP_001456359.1| branched-chain amino acid transporter permease subunit LivH [Citrobacter koseri ATCC BAA-895] gi|157086245|gb|ABV15923.1| hypothetical protein CKO_04879 [Citrobacter koseri ATCC BAA-895] Length = 308 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIIIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ L++R + + A Sbjct: 129 ----RDVALPSLFNGQWIIGSSENFAASITTMQLVIWIVTFLAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|146297471|ref|YP_001181242.1| inner-membrane translocator [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145411047|gb|ABP68051.1| urea ABC transporter membrane protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 303 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 88/262 (33%), Gaps = 4/262 (1%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 I + IY++ A GL I G + ++++ +GAY+ ++ + + Sbjct: 9 SNIFNALSVGSIYILIAMGLVITFGLMKIINMAHGEFIMLGAYTTYVIQNVFEKYWKSFF 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +++ I+G F I + ++L+ W + + Sbjct: 69 DYYILVAIPVAFIVGFLIGVFIEK--TIVKRLYERTLDSLLLTWGISLILQQLVRNIFGA 126 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +S + ++L+ L + + L +T I + + N Sbjct: 127 PNVEVKTPQWMSKQINFASHLFIPSRRLFILVVAISLLILMFILLNKTVIGLRIKAVLQN 186 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L +F + + G+AG + I IVILG Sbjct: 187 REIASALGINSEEIDSLSFGIGTGLAGVAGCCLTILGPI--GPSMGTNYIIDAFMIVILG 244 Query: 277 GMTSLSKIAKATAILIGVVELC 298 GM L + ++ I+ + Sbjct: 245 GMGYLPGVIISSLIIGFLKTFF 266 >gi|262164757|ref|ZP_06032495.1| ribose ABC transport system permease protein RbsC [Vibrio mimicus VM223] gi|262173033|ref|ZP_06040710.1| ribose ABC transport system permease protein RbsC [Vibrio mimicus MB-451] gi|261890391|gb|EEY36378.1| ribose ABC transport system permease protein RbsC [Vibrio mimicus MB-451] gi|262027137|gb|EEY45804.1| ribose ABC transport system permease protein RbsC [Vibrio mimicus VM223] Length = 327 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLVVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAASLIAMEVPVLLAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|154245564|ref|YP_001416522.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154159649|gb|ABS66865.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 290 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 97/304 (31%), Gaps = 26/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y + + GL+++ G + +++ +G Y+ +L +++GL + Sbjct: 8 VLNGILLGSMYAIISVGLTLIFGIVRVVNFAHGEFLMVGMYAAYLLAAKFGLHPYASAIP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ A G ++ ++ + + L+ + G V Sbjct: 68 VVLLLFALGALVQRFLIQPLLSADEHIQIFATVGLSTALVNLALLLFGADLYSVPPSAAQ 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + + L A + L+++ TA+ A R N+ Sbjct: 128 GSVQVAGFTLVKG-----------QIVMFVCALALVAGLHLFMQSTALGRAIRATAQNRN 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + AF + +A +G+A A F +V+LGGM Sbjct: 177 AALLMGVKVDKIYVIAFGMGAACVGLASALVMPLYPVTPTIGTYFVLT--AFVVVVLGGM 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ I+ V L + L+++ + Sbjct: 235 RSMYGAFFGAMIIGLVDSLSGYYI-------------APDLKEVVYFALFLLILIFKPTG 281 Query: 339 LLRL 342 L L Sbjct: 282 LFGL 285 >gi|316935597|ref|YP_004110579.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315603311|gb|ADU45846.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 433 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 114/329 (34%), Gaps = 32/329 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + L L L + + + I ++FA +I++G G+LS + Y +G Sbjct: 23 AIWIATALALLLLPKVFASGGSLTTFSLVGISIIFALSYNILLGQTGMLSFGHAVYYGLG 82 Query: 78 AY-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 + ++ G+++ + + L+ + + ++G + G A+ +L ++E+ Sbjct: 83 GFLAIHIINILAGNKFPIPLPLVPLIGGVAGLFFAALIGWVMTQRSGTAFAMISLGLAEL 142 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + + + G+AGI + + FR +I +YY++ Sbjct: 143 VASSALILRSFFGGEAGIS------------ANRTKLFRVFDLSFGPQIQIYYLVAAWTL 190 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 ++ + L RT + +RDN + + + AF S F G+AGA A + Sbjct: 191 IAIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFSGFFAGIAGALAAIN 250 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + + ++ V+ +GG+ + + + Sbjct: 251 FEIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTVLSLALSDL----------- 299 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +V+L + Sbjct: 300 ----TQVWQLYFGLFFIIVVLFAPGGITG 324 >gi|218781783|ref|YP_002433101.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218763167|gb|ACL05633.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 301 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 101/305 (33%), Gaps = 16/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + IGA+ + L + + L+ L + Sbjct: 8 LTNGLAIGGIYALIALGYTLVYGVLKLINFAHGDLFTIGAFLGLSLLTAFSLTDKLGFAM 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + ++ ++ + + Sbjct: 68 GVGALVLMIVCLVGIIGILLDQAAYKPLRTSPRL--SAVVSALGMSIVFSNAIMLVFGPN 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + + + +L+ L A++ ++++T I A R +Q Sbjct: 126 PQVYPHGILPTSVLHIFGLPFPVKRLLLLVTSVVLMAALYFFIQKTTIGAAIRAAAIDQD 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + F + A G AG +I M + + + ILGG+ Sbjct: 186 AARLMGINVNLVIMLIFFIGPALGGAAGVMVGLYYGQIKWTM-GWLYGLKAFTAAILGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + L + + F + L L++++R Sbjct: 245 GNIPGAMVGGLLLGVIESLGSAYISMAWKDAITF-------------VVLILILIVRPTG 291 Query: 339 LLRLR 343 LL R Sbjct: 292 LLGER 296 >gi|149913230|ref|ZP_01901764.1| ABC branched chain amino acid family transporter, inner membrane subunit [Roseobacter sp. AzwK-3b] gi|149813636|gb|EDM73462.1| ABC branched chain amino acid family transporter, inner membrane subunit [Roseobacter sp. AzwK-3b] Length = 308 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 96/307 (31%), Gaps = 21/307 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + + + A GLS+V G + ++++ + +GA + G L + ++ Sbjct: 15 AVTAAVLALTAVGLSLVFGVMRVVNIAHGEFFMLGAVIAWYVAHWMGGHPALGFVAALVV 74 Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF- 158 + + + + R DY T++ + I+ + ++ G V Sbjct: 75 APLLVGAIAVAADMTILKRLDYDPERTIVATIGLLYIIQQLTLMSYGPEARPVEAPFNQR 134 Query: 159 --LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 L R + + + + V+ + + + RT I R + + Sbjct: 135 IALPWIERGESGWQFYYPWGLSTTSYKLAVIGAAGAVLCGVWALMTRTRIGLVMRATQAD 194 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + F + + +A + + ++ +VI+G Sbjct: 195 REMAVAFGIPVEKVYALVFGLGAGLAALAAVLIVPIQQA--HYLMGADPLLLSFIVVIIG 252 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL A ++ + L + + LV++ R Sbjct: 253 GLGSLPGTVLAAVLIGLSDGIISVFFSPTLAE-------------ILATLLVGLVLVFRP 299 Query: 337 HSLLRLR 343 L R Sbjct: 300 QGLFGTR 306 >gi|148378457|ref|YP_001252998.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] gi|153934087|ref|YP_001382846.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A str. ATCC 19397] gi|153936150|ref|YP_001386413.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A str. Hall] gi|148287941|emb|CAL82007.1| branched-chain amino acid transport system,permease protein [Clostridium botulinum A str. ATCC 3502] gi|152930131|gb|ABS35631.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A str. ATCC 19397] gi|152932064|gb|ABS37563.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A str. Hall] Length = 290 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 106/304 (34%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G L +L+ G + + + S + + + L I + Sbjct: 6 LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFVFFTMISIFKIPLILAIIL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+G G+++ L + K A+A L+ S +L + G Sbjct: 66 TIVITGLIGVLLYLIAYKPVLKGDAMAPLLSSLGVSIMLEALGQLIWGTE---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + + + ++ L L + ++ ++ I R + N+K Sbjct: 116 -IIPFPINIPKGIYSIASIKLSNIQIFIFLFSITLMIILYKFITKSNIGLQIRALSYNRK 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F++++ ++G + D + M I + ILGG+ Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL L + + F I L LV++++ + Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280 Query: 339 LLRL 342 + Sbjct: 281 IFGE 284 >gi|319791077|ref|YP_004152717.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315593540|gb|ADU34606.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 306 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 102/309 (33%), Gaps = 15/309 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL++V G + +L+L + GAY +R Sbjct: 10 LLNGLGYGLMLFLLAAGLTLVFGIMDVLNLAHGSLFMSGAYVAAEAHTRT---------- 59 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + + L + L + +L + I + +A Sbjct: 60 GSFTAAIVIAVAVTVVVALLLEVLLMRRLYTRDHLAQVLATFGVILVADDIVKMAWGPSP 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + + Y + +L+G ++ ++ L + T I R ++ Sbjct: 120 VMSPTPAALSGPVNLMDGLPYPAYRLVILIGGLLVALALYLLVNHTRIGMRVRAGASDRP 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + +A +AGA + I + ++++GG+ Sbjct: 180 MAELMGVRVGRIFNGVFLLGAALAALAGALMGPIVAV--QVGMGEAILIPALVVLVIGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335 S+ A ++ V + + L + + M + +V++ R Sbjct: 238 GSVRGAFVAALLVGVVDTIGRAFVPMLLRATLPPATAADLGPLFAEVAMYALMVIVLIFR 297 Query: 336 SHSLLRLRT 344 L RT Sbjct: 298 PSGLFSART 306 >gi|254720746|ref|ZP_05182557.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella sp. 83/13] gi|265985802|ref|ZP_06098537.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306839300|ref|ZP_07472116.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella sp. NF 2653] gi|264664394|gb|EEZ34655.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306405548|gb|EFM61811.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella sp. NF 2653] Length = 315 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + LI A +I+ G G S + Y +G Sbjct: 6 ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AYS I ++ L + + + + M++GLP L +G Y AIATL + ++ I Sbjct: 66 AYSAGIAMVQFNLPFFAGAAIGIVAAVVFVMLIGLPILHLKGHYFAIATLALPQVMAAIT 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + F Y L + ++ + Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ IR+N++ ++ K+ A +S AF MAGA A + Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ N+ +I + + GG ++ L V ++ Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 I + + +++ L Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292 >gi|167769501|ref|ZP_02441554.1| hypothetical protein ANACOL_00835 [Anaerotruncus colihominis DSM 17241] gi|167668469|gb|EDS12599.1| hypothetical protein ANACOL_00835 [Anaerotruncus colihominis DSM 17241] Length = 302 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 87/311 (27%), Gaps = 18/311 (5%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 G + + IY + A G ++V G + L++ +GAY + Sbjct: 3 GLFVFINQLINGLQVGSIYALVALGYTMVYGIVKLINFAHGDFIMVGAYLALFSVPMLLG 62 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + I V ++ + L + S I Sbjct: 63 AGLPAILVIVLVIVMSVIGCSLLGMATERIAYKPLRGSPSLSVLITAIAVSLFLE----N 118 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 ++I + + + L++++T + A Sbjct: 119 LFMILFSSASKPFPAIISANPISIGKIQTNAVTIITIALSIVCMICLQLFIKKTRMGKAM 178 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + ++ A + FA+ S +A + ++ ++P M + Sbjct: 179 RAVSEDAGAAMLMGCNSNVTISMTFAIGSGLAAVAAVMYCSAYPLVNPYM-GSMLGLKAF 237 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 +LGG+ + ++ V L Y + F L + Sbjct: 238 IAAVLGGIGIIPGAMLGGFVIGLVESLTKAYISSYLADAVVFG-------------ILIV 284 Query: 331 VILMRSHSLLR 341 V+L++ +L Sbjct: 285 VLLVKPTGILG 295 >gi|254284852|ref|ZP_04959819.1| ribose transport system permease protein RbsC [Vibrio cholerae AM-19226] gi|150425637|gb|EDN17413.1| ribose transport system permease protein RbsC [Vibrio cholerae AM-19226] Length = 322 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 24 LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 82 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 83 LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 130 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 131 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWYL 190 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 191 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 245 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 246 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 305 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 306 AKAVVILLAVLV 317 >gi|90424512|ref|YP_532882.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90106526|gb|ABD88563.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 350 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 98/287 (34%), Gaps = 3/287 (1%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 + +LL S Y + ++V A L ++ G G LS + I Y Sbjct: 22 LFGVVLLSALAYPLISDGYTVGNTVYFFVWVFIALSLCLIWGYGGALSFGQTAFFGIAGY 81 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 SY IL +G + L + + G ++ L + L + + ++++ Sbjct: 82 SYGILTINFGSAYGLTLVAMLLAIGVAALVAVLLGYFMFFGRIEGVFLGIVTLAVTLMLE 141 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE---IFMYYVLLGMCFLSAS 196 + + + I + +YY +LG+ + Sbjct: 142 RFMAQTAGPEWRIGSARLNGFNGMSGMPPLTIPWFDGPIVLFADVGLYYFVLGLVIVVYL 201 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L ++ N IR+N + L I +L F + +A GM+G + A I Sbjct: 202 GLRILVNSSFGNVIVAIRENPQRAEMLGYDIRKFQLINFVIGAALAGMSGVLYTAWGQYI 261 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 +P + + + V +GG + L+ T +++ + Sbjct: 262 TPSSMGMTSAALPLIWVAVGGRSDLTSTVIGTLLVLAGFQALTIYGS 308 >gi|320535907|ref|ZP_08035978.1| amino acid or sugar ABC transport system, permease protein [Treponema phagedenis F0421] gi|320147244|gb|EFW38789.1| amino acid or sugar ABC transport system, permease protein [Treponema phagedenis F0421] Length = 581 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 92/295 (31%), Gaps = 23/295 (7%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 G S I ++ Q + + +A G++ ++ G L+ A+GA ++ Sbjct: 264 APLSGNGNLLSLPNILTILEQSSVRMFYAIGVAGIILLAG-TDLSVGRMVAMGAIITGLI 322 Query: 85 -------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY--LAIATLIMSEIFQN 135 + +G W ++ + + + + S + A L + Sbjct: 323 LHPGQNIVTFFGFGPWDFTHIAMIWRVLMSLGISIISCVLFSIFAGFFSARLKIHPFIST 382 Query: 136 ILIKWKP---ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + + + G +G V + + + + + + ++ + Sbjct: 383 LATQLMIYGILFFGTSGTPVGPIDNSIKELLGGRWILGVVNGNLITFPKLIIPAIIAIII 442 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 +T + + N +A ++ + + F ++ F G GAFF A Sbjct: 443 AWFI----WNKTILGKNMYAVGGNPEAASVSGISVFWVTMYVFIMAGVFYGF-GAFFEAF 497 Query: 253 RDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMN 302 + S + E + + V+ GG+ L I G+ + Sbjct: 498 KANASAGTGQGYELDAIAACVVGGISFNGGIGKLEGAVIGVIIFTGLTYCLTFLG 552 >gi|23499793|ref|NP_699233.1| branched-chain amino acid ABC transporter permease [Brucella suis 1330] gi|23463359|gb|AAN33238.1| branched-chain amino acid ABC transporter, permease protein [Brucella suis 1330] Length = 406 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 105/311 (33%), Gaps = 26/311 (8%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + + + IQ+LI +FA S++ G G+L + +G+++ V + +G Sbjct: 20 PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLPFGHAAYFGLGSFAAVHAMNAFGGE 79 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L P+ + G++ GL + F + +++ +L P G G Sbjct: 80 GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + +YY+ L S ++ L T Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 +R+N L + FA+S+ F G+AGA A + + + +F+ + V+ Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +GG+ + A A + + + + + LV Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293 Query: 332 ILMRSHSLLRL 342 ++ L+ Sbjct: 294 MMFLPRGLVGE 304 >gi|313114517|ref|ZP_07800031.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Faecalibacterium cf. prausnitzii KLE1255] gi|310623140|gb|EFQ06581.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Faecalibacterium cf. prausnitzii KLE1255] Length = 292 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 96/306 (31%), Gaps = 26/306 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y+ + Y + A G ++V G L L++ + + + V + L+ + I Sbjct: 7 PYLLAGISVGGQYALIAIGYTMVYGILRLINFAHGDIFTVAGFLMVYATASLPLT--ISI 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P+ + + G+ + + K ++ +I + +L G Sbjct: 65 PLVVVATVLLGIAVEKIAYKPLRTAPRMSVMISAIGMSYLLQNSMWYVTGGLAKQYPALP 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + V ++L A+++ +++T I A R + Sbjct: 125 -----WISDTVTVLGCQTKRVTVVTPFLVIVLV-----AALVTLIQKTKIGMAMRAASRD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + I FAV S + + ++ ++P + + + G Sbjct: 175 FETAQLMGIKINNVISFTFAVGSFLAAIGSMMYFSNYTAVTPTV-GAMPGLKAFVAAVFG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ I+ L G F+ F L +V+ ++ Sbjct: 234 GIGSIPGAVIGGFIIGICESLIKGAGATTFSDAFTF-------------ALLIVVLAVKP 280 Query: 337 HSLLRL 342 L Sbjct: 281 TGLFSE 286 >gi|146279300|ref|YP_001169458.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025] gi|145557541|gb|ABP72153.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025] Length = 305 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 100/308 (32%), Gaps = 15/308 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + ++ + A GL++V G + +++L Y GAY G + L+ Sbjct: 10 LNGLQFGILLFLVAAGLTLVFGVMDVINLAHGSQYMAGAYLAAAFAGLTGSFLLGLLCAV 69 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + ++ L + L+ + + + + Sbjct: 70 PLALAFGLILERLVIRRLYDRSHLDQVLVTFGLMLMLNEGVRLLWGSAPISVEMPEALSG 129 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + Y ++ +L ++A++ + RT + R N+ Sbjct: 130 SIPIWGN----------LRYPVYRLAILAAGLGVAAALWWAIHRTRMGMLLRAGASNRAM 179 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L T I L F + G AGA + I+ ++++GG+ Sbjct: 180 VSALGTDINRLFLLVFGAGAMLAGFAGAMMVPVVSA--EPDMGDTVLILTFVVIVIGGIG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336 S+ A ++ V L SL++ D + T L+ I + ++ +R Sbjct: 238 SIRGAFVAALLVGLVDTLGRTFGPILLRSLMEPDAASQTGRTLAPMLIYILMAAILAVRP 297 Query: 337 HSLLRLRT 344 L ++ Sbjct: 298 AGLFPVQR 305 >gi|148254637|ref|YP_001239222.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146406810|gb|ABQ35316.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 354 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 110/328 (33%), Gaps = 17/328 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 A+ +L S Y + ++V A LS++ G G LS + Sbjct: 22 AFWALFALVLAGALAYPLFSDGYTVGNTVYFFVWVFIALSLSLIWGYGGSLSFGQTAFFG 81 Query: 76 IGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 I Y Y IL + W+ + ++ ++ ++G R + + + ++ Sbjct: 82 IAGYGYGILTINFGASYGFTWIALLLAIGMAALVAALLGYFMFFGRIGGVFLGIVTLAVT 141 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + + + + L + + ++ +YYV+L M Sbjct: 142 LMLERFMAQTAGPEWRIGAARLNGFNGMSAMPPLTIPWFGGPIVLFADVGLYYVVLAMLV 201 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + L ++ N IR+N + L I +L F + +A G++G + Sbjct: 202 LVYLALRILMNSSFGNVIVAIRENPERAEMLGYDIRKYQLITFVIGAALAGLSGVLYTVW 261 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P + + + V +GG + L+ T ++ + Sbjct: 262 GQYITPSSMGMTAASLPLIWVAVGGRSDLTATIIGTLVV--------------LSGFQAL 307 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLL 340 + M + L L +L+ + L+ Sbjct: 308 TIYGSQYALVFMGVLLVLTVLIAPNGLV 335 >gi|322804736|emb|CBZ02288.1| high-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) [Clostridium botulinum H04402 065] Length = 290 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 106/304 (34%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G L +L+ G + + + S + + + L I + Sbjct: 6 LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFVFFTMISIFKIPLILAIIL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+G G+++ L + K A+A L+ S +L + G Sbjct: 66 TIVITGLIGVLLYLIAYKPVLKGDAMAPLLSSLGVSIMLEALGQLIWGTE---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + + + ++ L L + ++ ++ I R + N+K Sbjct: 116 -IIPFPINIPKGTYSIASIKLSNIQIFIFLFSITLMIILYKFIMKSNIGLQIRALSYNRK 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F++++ ++G + D + M I + ILGG+ Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL L + + F I L LV++++ + Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280 Query: 339 LLRL 342 + Sbjct: 281 IFGE 284 >gi|298294169|ref|YP_003696108.1| inner-membrane translocator [Starkeya novella DSM 506] gi|296930680|gb|ADH91489.1| inner-membrane translocator [Starkeya novella DSM 506] Length = 292 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 98/307 (31%), Gaps = 26/307 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I Y + GL+++ G + +++ YA GAY + G++ ++ I Sbjct: 10 LANTLIMGGTYALLGIGLTLIFGIMRVVNFTHGELYAFGAYGLYFVAVVLGMNFYVSILF 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G ++ L L+ + T+++ +L + + G + Sbjct: 70 AIAGGMVLGALIELVLLRPKRGADIDTTMLLMIGAWIVLQNTEHLAWGSIAKSIPSPFPT 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +V L + + RT + NA R + Sbjct: 130 -----------EPLVIGPISLSWLRIFVFGVAILLIIATYFLINRTRLGNAMRATFQDTD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I FA+ S AGA + ++ +IVILGG+ Sbjct: 179 TAALMGVNIRAIYTMTFALGSGLAAAAGALLGPV--FVVTPTMGDLASLKAFAIVILGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ IL V E+ G + + F + + +V+L R Sbjct: 237 GNITGATIGGFILAFVEEIGAGYISSGYRDAMGF-------------LIIIVVLLFRPTG 283 Query: 339 LLRLRTP 345 + Sbjct: 284 IFARVER 290 >gi|157150789|ref|YP_001450906.1| branched-chain amino acid permease protein [Streptococcus gordonii str. Challis substr. CH1] gi|262283200|ref|ZP_06060967.1| branched-chain amino acid permease [Streptococcus sp. 2_1_36FAA] gi|157075583|gb|ABV10266.1| branched-chain amino acid ABC transporter, permease protein [Streptococcus gordonii str. Challis substr. CH1] gi|262261452|gb|EEY80151.1| branched-chain amino acid permease [Streptococcus sp. 2_1_36FAA] Length = 289 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 101/289 (34%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + L+ +L + V Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYFLINSLKLNFFLALIV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + + IA LI + +L G + Sbjct: 65 AMIGTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFLLEYLMVYFVGAS---------- 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +I RF + +L FL ++ +++T + A R + + Sbjct: 115 -TLPFPQVIPTVRFNLGPITVSNIQLMILGISIFLMLALQFIVQKTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG A + + P M + I +LGG+ Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGIKSFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + A ++ + F + + + I Sbjct: 233 GIIPGAALGGFVIGLLETFATAFGMSDFRDAIVYGILIIILLIRPAGIL 281 >gi|126726247|ref|ZP_01742089.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacterales bacterium HTCC2150] gi|126705451|gb|EBA04542.1| ABC branched chain amino acid transporter, inner membrane subunit [Rhodobacterales bacterium HTCC2150] Length = 392 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 95/364 (26%), Gaps = 36/364 (9%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 I+ V L G + + L + A + ++ G G+LSL + Sbjct: 20 IILASFTVLVTLGSEAFGTGFVSTSLVKTLGKTLCLCLVALAMDLIWGYCGILSLGHIAF 79 Query: 74 YAIGAYSYVILGSRYGLSIWLL-------------------------------IPVSAMI 102 + +G Y + + ++ P M Sbjct: 80 FGLGGYMIGMWLMYERTRLIVMQAAENTQLPMTPQEIQDAVGSQIFGVVGGSEFPAIWMF 139 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 S + + + + L L + + A + Sbjct: 140 SHLLSVQLLMVVMVPGVLALIFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSGLRG 199 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR----TAISNAWRTIRDNQK 218 L P + + + + + + + N R IRD++ Sbjct: 200 NNGLSGLQNLPGRDDTPQSVISMWFFWGSAFALGLGYLCAKLIVESKMGNVMRGIRDDEA 259 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + KL F +++ +AGA + I+P +I + V +GG Sbjct: 260 RVRFLGYNVEAYKLFIFTLTAIIAAVAGALYYPQAGIINPAEIAPIASIYLAVWVAIGGR 319 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L A++ + G + L+ ++ V L Sbjct: 320 GRLYGAVIGAAVVSLLSSWFTGGQAPDIPLGFA-TLKWVDWWLVLLGLSFVFVTLYAHKG 378 Query: 339 LLRL 342 + L Sbjct: 379 IGGL 382 >gi|269127695|ref|YP_003301065.1| inner-membrane translocator [Thermomonospora curvata DSM 43183] gi|268312653|gb|ACY99027.1| inner-membrane translocator [Thermomonospora curvata DSM 43183] Length = 743 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 111/327 (33%), Gaps = 11/327 (3%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + L+ ++L + + + + + + A L+++ G G L+L Sbjct: 306 RVPTVRSAAVWGLVLVAVVYLYSLLLEDSGITTLTLGMTFAIIALSLTVLTGYAGELNLA 365 Query: 70 CVIAYAIGAYSYVILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + A+ G + + G ++ LP+L+ RG YLA+A Sbjct: 366 PLSFGAVATIVAFHFGVSGSGLSAYLTPQGVLAGVAAAALVGGLIALPALRLRGLYLALA 425 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 T+ N++++ + + L + + + Sbjct: 426 TMAFGVFLSNMVLR------DTTEHELFGVKFTLFPNGTLAVPPPKLGPLDLRDGQTFLM 479 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + L + LR + ++D+ A L ++ KLS F +S+ G+ Sbjct: 480 TATVLFALLGVALAALRNSGYGRRLAAMKDSPAATAMLGQDLVRLKLSVFMISAGIAGLG 539 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG-MNFY 304 G +A+ +S + F ++ ++ +V++ G+ +S + + G N Sbjct: 540 GVLMSAAAGSVSGENFTIMGSLALLMLVVVAGIGYISGALLGGLMSGVGATVLVGTFNDL 599 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLV 331 + H ++ AL + Sbjct: 600 ALEHEAMSSIYSALAHLVMVGTALVGM 626 Score = 60.3 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 72/283 (25%), Gaps = 8/283 (2%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + +Y + A GL + + G+ + +G + + L +G + Sbjct: 6 TYTLLGLVLGAVYFIAASGLVLTYNTSGIFNFAHGAQAMLGTFLFWQLKYDWGWPTLAAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V + G P L L + L + I++ + Sbjct: 66 LVVIGLVG--------PLLGAALHALIMRGLRDTADVTKIIVTVAVLLGMVYLSQWIWNP 117 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 T + V+ L+ ++ + + R+ I R D+ Sbjct: 118 DEARTVEMFFGADAKVTVLGVVVRYHEIVCLVAAAAIAIGLRVLFTRSRIGVVMRGSVDD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 A + ++A+ S AG I + + G Sbjct: 178 PDLLRLNGHDPERAAMLSWALGSTLAVTAGVLIVPVGGGALEANMLTLLVIDAFAAAMFG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + S+ + +L G S M Sbjct: 238 RLRSIPRTFAGAMVLGLAATYVMGYLPASGPVTGNLRVSLPMI 280 >gi|170699137|ref|ZP_02890191.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|170135932|gb|EDT04206.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] Length = 291 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 93/304 (30%), Gaps = 29/304 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIP 97 I ++ + + ++ A GL+IV G + +++L IGAY+ I + W + Sbjct: 4 ILNVLSSVCLLMLIALGLAIVFGMMDIVNLAHAEWVTIGAYTLAILQAVGGPQAFWFALF 63 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + G + ++ + L + + + + Sbjct: 64 AAPAVGAVLGWCLERLVIRLLYERPLDTLLATYAVSLIVQKALELVFG------------ 111 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + Y ++ +V+ ++A +L T R + + Sbjct: 112 -TQPMLVYAPINGALAVPGGSYPMYRLFVIGVAFTVTAGCLLIFACTRFGTQLRAVIQHP 170 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 ++ AF +A +AG A S + +++LGG Sbjct: 171 AMAEAVGIDTRRLNRMAFCGGAALASLAGVLVAPMVSVESH--LGVAYLAKAFFVIVLGG 228 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +A + + L S L+++ ++I R Sbjct: 229 IGSILGSLLGSAFVGTLETLLSYRVDPSLASA-------------LVLVLSIVLIRFRPQ 275 Query: 338 SLLR 341 L+ Sbjct: 276 GLVP 279 >gi|311277620|ref|YP_003939851.1| inner-membrane translocator [Enterobacter cloacae SCF1] gi|308746815|gb|ADO46567.1| inner-membrane translocator [Enterobacter cloacae SCF1] Length = 308 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + LI + L + +T G Sbjct: 72 LVAAGFIGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + S + + ++ L++R + + A Sbjct: 129 ----RDIALPSLFNGQWVVGSSDSFSASITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ +L L + ++ F L + Sbjct: 244 TAAVLGGIGSIPGAMIGGLVLGIAEALSSAYLSTEYKDVVAF-------------ALLIV 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|259910107|ref|YP_002650463.1| branched-chain amino acid transporter permease subunit LivH [Erwinia pyrifoliae Ep1/96] gi|224965729|emb|CAX57261.1| High-affinity branched-chain amino acid transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283480203|emb|CAY76119.1| branched-chain amino acid ABC transport system,inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 308 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 96/312 (30%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y I+ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 V+ +I+ G + + K + LI + L + +T G Sbjct: 72 LIGCGFVVAVVIASCYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + V + ++ +++R + + A Sbjct: 129 ----RDLALPSLVAGQWTLGVSNGFAATISTMQLVIWGVTFLAMLALTVFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFLAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L + Sbjct: 244 TAAVLGGIGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIV 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|330886854|gb|EGH20289.1| high-affinity branched-chain amino acid ABC transporter permease BraD [Pseudomonas syringae pv. mori str. 301020] Length = 304 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 81/304 (26%), Gaps = 14/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y I AY I + P Sbjct: 9 MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ + + I + Sbjct: 69 LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ F S FV ++L+ F + ++ T + R + ++K Sbjct: 129 GVPTLLEGAWRFEIGSGFVQITYTKIFILIAAFFGMGVLTYIIKYTKLGRMCRATQQDRK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F + +A +AG + F I + +LGG Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGG- 246 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + G + L L+++ R Sbjct: 247 ------------IGSLPGGMLGGLILGVAESQFSGLINSDYKDVFSFGLLVLILIFRPQG 294 Query: 339 LLRL 342 LL Sbjct: 295 LLGR 298 >gi|254691558|ref|ZP_05154812.1| Bacterial inner-membrane translocator [Brucella abortus bv. 6 str. 870] gi|254695145|ref|ZP_05156973.1| Bacterial inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] gi|256256744|ref|ZP_05462280.1| Bacterial inner-membrane translocator [Brucella abortus bv. 9 str. C68] gi|260757184|ref|ZP_05869532.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260882992|ref|ZP_05894606.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261215501|ref|ZP_05929782.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|297250100|ref|ZP_06933801.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|260677292|gb|EEX64113.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872520|gb|EEX79589.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260917108|gb|EEX83969.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|297173969|gb|EFH33333.1| branched-chain amino acid transport system permease [Brucella abortus bv. 5 str. B3196] Length = 315 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 107/324 (33%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + LI A +I+ G G S + Y +G Sbjct: 6 ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I ++ L + + + + M++GLP L+ +G Y AIATL + ++ I Sbjct: 66 AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + F Y L + ++ + Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ IR+N++ +++ K+ A +S AF MAGA A + Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMDINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ N+ +I + + GG ++ L V ++ Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 I + + +++ L Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292 >gi|159037418|ref|YP_001536671.1| inner-membrane translocator [Salinispora arenicola CNS-205] gi|157916253|gb|ABV97680.1| inner-membrane translocator [Salinispora arenicola CNS-205] Length = 293 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 98/311 (31%), Gaps = 23/311 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + + Y + A GL+++ G L +++ Y +GA+ +L + G+ W + Sbjct: 6 QNTFNGLVSGAFYALLALGLAVIFGMLRVVNFAHGAFYMLGAFGAYVLLTEAGVPFWAAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V + GM + + + +++ I+ + G Sbjct: 66 VVVPLALAGLGMALERAFIHRLTRLDPLYNFLLTFGLTLIVQDLVKLRYGVQSSPYEAP- 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + ++L + ++ L RT + R + Sbjct: 125 ---------SALRGSVDFGIFEFPTYRVFILGFAVAVCVAVWWALARTRVGMVVRASTER 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L + F G+AG A R + I+V ++V++G Sbjct: 176 PELTRALGINVGRWITPVFGFGIGLAGLAGVLAAP--MRAVNPLMGADLIIVVFAVVVIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ A + V +F + T++ I + V+L R Sbjct: 234 GLGSIFGSVAAGFGIGMVQAWAEAYL-----------SAFPIVSQTIVFIVMAAVLLWRP 282 Query: 337 HSLLRLRTPSN 347 L S Sbjct: 283 AGLFGRAEASA 293 >gi|121610757|ref|YP_998564.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121555397|gb|ABM59546.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 287 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 106/306 (34%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A GL+++ G LG+ G Y L R G++I L + Sbjct: 9 ILNGLVVGSVYTLIALGLTVIFGILGIAHFAHGSVAMFGGYLTHALMQRMGVNILLAMVP 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ GM++ + + I I++ ++ K + G + + Sbjct: 69 AMLVGALLGMLIERLAYRPVRAGPPINAFIVALGLTMVIEKLNLLLFGVDQVVLPTPF-- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 YV + L ++ L++ RT + + R + N+ Sbjct: 127 ----------GRTLEWGEWAMPELRIYVFVIAVLLVLALTLFMHRTWMGASIRAVAQNRS 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+SSA AG A I +++ILGG+ Sbjct: 177 AAVLMGVNVNRVSSIVFALSSALGVAAGVLIGALFAIAPGVSGGLV--IKGFAVLILGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL L G + ++ F + + V+L+R Sbjct: 235 GSIPGAIVGGLILGVSEALAAGFVSSAYKDVISF-------------VIMIAVLLLRPEG 281 Query: 339 LLRLRT 344 L+R +T Sbjct: 282 LMRRKT 287 >gi|329924208|ref|ZP_08279395.1| urea ABC transporter, permease protein UrtB [Paenibacillus sp. HGF5] gi|328940818|gb|EGG37131.1| urea ABC transporter, permease protein UrtB [Paenibacillus sp. HGF5] Length = 301 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 16/290 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + G + ++++ IGAYS + + + + I+ M ++ + Sbjct: 27 VTFGLMNVINMAHGELIMIGAYSTYVTQGLFSAYMPKSWFDTYFIAALLVSFMVAAAVGW 86 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + I L ++L W + + T S + +S + Sbjct: 87 LLEMVLIRHL-YGRPLDSLLATWGVGMMLQQIARFIFGAPNVAVTSPSWLNGGLAITSSI 145 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 I +++L + + ++ L++ RT R + N+ L + FA+ Sbjct: 146 ILPYKRLFIVLLVAVVLTAMYLYIYRTVQGRRMRAVMQNRSMAGCLGISTRRVDGLTFAI 205 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG + +V+LGG+ L + L Sbjct: 206 GSGIAGIAGCALTLLGPI--GPSIGTYYIVDAFMVVVLGGVGKLVGTVAGALGIGVFNTL 263 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L+ + + + L+ LRT S Sbjct: 264 FETYTSASIGK-------------VLVFACIVAFLQWKPRGLVALRTRSL 300 >gi|329114866|ref|ZP_08243622.1| Urea ABC Transporter Permease Protein UrtC [Acetobacter pomorum DM001] gi|326695763|gb|EGE47448.1| Urea ABC Transporter Permease Protein UrtC [Acetobacter pomorum DM001] Length = 371 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 95/350 (27%), Gaps = 36/350 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +L + + L + + ++ + L Y GL G G+LSL I + + Sbjct: 10 ILFLSILSAILLIVLPLGLDAFRLNLVGKYLTYAFVTIGLVACWGDSGILSLGQGIFFGL 69 Query: 77 GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 G Y + + S Sbjct: 70 GGYCMAMFLKLQASTLEATKSQSTPGIPDFMDWNQITALPWFWKPFHSLSFSLVAIIAVP 129 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174 L M + +A L L + + Sbjct: 130 VLLAMVIGAAMFKRRVGGTYFAIITQAIASVLTILIIGQQGYTGGVNGITDLRTLDGWDI 189 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 ++ +YY + + ++ ++R++ + R +RD + + K+ Sbjct: 190 RTDHAKLVLYYAGVFLLLACLLLVRFVRQSKLGRILRAMRDQEDRVRFSGYNVANFKIFI 249 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 FA+++A G+ GA F +SP +I ++ +GG SL T ++ Sbjct: 250 FALAAAMAGVGGALFTLEVGFMSPTFVGIVPSIEMVIYCAVGGRNSLVGAVYGTLLVNWA 309 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 F S T M +++ L L Sbjct: 310 RT--------------SFSESLPELWTFAMGGLFIGIVVFLPGGLASLYE 345 >gi|206562127|ref|YP_002232890.1| putative amino acid transporter [Burkholderia cenocepacia J2315] gi|198038167|emb|CAR54118.1| putative amino acid transporter [Burkholderia cenocepacia J2315] Length = 262 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 86/261 (32%), Gaps = 14/261 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I ++ + + + A GL+IV G + +++L +GAY+ + S G + + Sbjct: 4 ILNILSYVSVLTLVALGLAIVFGLMDIVNLAHAEWVTMGAYTLAVAQSVGGQHAFWAALL 63 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A I GA + + TL+ + I+ K + G V Sbjct: 64 AAPIVGAGLGWCLERFVIRLLYARPLDTLLATYAVSLIVQKAIELVFGTQPTLVYAPFN- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 Y + +V+ ++A + RT R + + Sbjct: 123 -----------ATVEVPGGSYPAYRMFVIGVALAVTAGCWVLFTRTRFGTKLRAVIQHPA 171 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ AF +A +AG A S S +++LGG+ Sbjct: 172 MAEAVGINTRRLNRVAFCGGAALASLAGVLVAPMVSVESH--LGMSYLAKAFFVIVLGGI 229 Query: 279 TSLSKIAKATAILIGVVELCC 299 S++ +A + + L Sbjct: 230 GSVAGSILGSAFVGTIETLLA 250 >gi|310659507|ref|YP_003937228.1| leucine/isoleucine/valine ABC transporter membrane protein [Clostridium sticklandii DSM 519] gi|308826285|emb|CBH22323.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Clostridium sticklandii] Length = 292 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 29/305 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G S+V + + IG+Y S S + Sbjct: 8 MINGLSIGSVYALMAVGYSLVYSIMNFSNFAHGGVIMIGSYIGFFCISLLNFSFPVAFLT 67 Query: 99 SAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +A+ SG +++ + + + + +I + L T G Sbjct: 68 AALGSGLLAVVLEKVAYNPLRKRNAPFLYFIISAMGASIFLENIVVATIGPTFRTYPPVF 127 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + + ++ + +T I A R + Sbjct: 128 SATPIQ-----------IGGLTIGRLDVLMFVISAISLSILVYIIEKTKIGLAIRATSYS 176 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 K + + + F + G+AG F + + + + G Sbjct: 177 SKGSTLMGVNVDKVIFTIFLLGGILAGIAGVLFGMKY---TVYPQIGAITMKSFIAAVFG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL + +L + L G + + L V+++R Sbjct: 234 GLGSLQGAVIGSILLGIIETLTSGYIS-------------SQYRDLIAFALLIAVLIIRP 280 Query: 337 HSLLR 341 ++ Sbjct: 281 TGIMG 285 >gi|238922891|ref|YP_002936404.1| galactoside ABC transporter, permease protein, putative [Eubacterium rectale ATCC 33656] gi|238874563|gb|ACR74270.1| galactoside ABC transporter, permease protein, putative [Eubacterium rectale ATCC 33656] Length = 549 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 29/297 (9%), Positives = 77/297 (25%), Gaps = 9/297 (3%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + I ++ Q + A G++ ++ G L+ +G + I+ + + Sbjct: 247 PLLTYNNILNILQQASPRMFLALGVAGLILLTG-TDLSVGRMVGMGMTTATIIMHQGINT 305 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + L ++ F I+ + Sbjct: 306 G--SVFGHIFDFTGVPTGARVVIALLACIVLCTFFTSIAGFFTAKFKMHPFISTMANMLV 363 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + + V P+ + ++L A + +T Sbjct: 364 IFGIVTYATKGVSFGAIEPVIPNMIIPKLNGFPTIILWAVAAIAIVWFIWNKTTFGKNLY 423 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 + N +A ++ L AF ++ G A + ++ I+ Sbjct: 424 AVGGNPEAAAVSGISVFAVTLGAFVMAGILYGFGSWLECARMVGSGSAAYGQGWDMDAIA 483 Query: 272 IVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 ++ GG+ +S + I + + + + T Sbjct: 484 ACVVGGVSFTGGIGKISGVVTGVCIFTALTYSLTILGIDTNLQFVFSGIIILVAVTL 540 >gi|238761715|ref|ZP_04622690.1| Inner-membrane translocator [Yersinia kristensenii ATCC 33638] gi|238700229|gb|EEP92971.1| Inner-membrane translocator [Yersinia kristensenii ATCC 33638] Length = 325 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 95/317 (29%), Gaps = 17/317 (5%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + L++ A GL+ + G G+LS + + Y+Y ++ Sbjct: 3 ALALPLVVDSAMIGDFSYFLLWTFCAIGLAAMWGHGGILSFGQTAFFGLAGYTYGVMTLN 62 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 +G + M + + + + + ++++ Sbjct: 63 FGDGVLSTWSGLIMALLVAAAVAAALGYLMFYGGVTGIFIGIVTLSFTLVLETFMSQTAG 122 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSASIILWLRRT 204 + + + + + YY+++ + + + R+ Sbjct: 123 PQWAIGSARLNGFNGMSGMPPLSLPWFDGKLLTLEGNAFYYLIILLLAGVYWGVRRVLRS 182 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 +IR+N + L I +L F + G++GA + I+P + Sbjct: 183 DFGLTLASIRENPRRAEMLGIDIRRYQLLVFVLGGVLSGLSGALYTLWGSYITPSSMGLT 242 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + + V G ++ A TA+L+ + + + L+ Sbjct: 243 AAAMPVIWVATAGRKNIFGTAVITALLVWLSQWLAIYG--------------SEYAMILL 288 Query: 325 VIALFLVILMRSHSLLR 341 L V+L + LL Sbjct: 289 GAILLFVVLAAPNGLLP 305 >gi|62318009|ref|YP_223862.1| inner-membrane translocator [Brucella abortus bv. 1 str. 9-941] gi|83269985|ref|YP_419276.1| inner-membrane translocator [Brucella melitensis biovar Abortus 2308] gi|189023261|ref|YP_001933002.1| Bacterial inner-membrane translocator [Brucella abortus S19] gi|237817555|ref|ZP_04596545.1| inner-membrane translocator [Brucella abortus str. 2308 A] gi|254698246|ref|ZP_05160074.1| Bacterial inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] gi|254731689|ref|ZP_05190267.1| Bacterial inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|260544195|ref|ZP_05820016.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038] gi|260759447|ref|ZP_05871795.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260762691|ref|ZP_05875023.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|62198202|gb|AAX76501.1| hypothetical LivM [Brucella abortus bv. 1 str. 9-941] gi|82940259|emb|CAJ13322.1| Bacterial inner-membrane translocator [Brucella melitensis biovar Abortus 2308] gi|189021835|gb|ACD74556.1| Bacterial inner-membrane translocator [Brucella abortus S19] gi|237787310|gb|EEP61528.1| inner-membrane translocator [Brucella abortus str. 2308 A] gi|260097466|gb|EEW81340.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038] gi|260669765|gb|EEX56705.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260673112|gb|EEX59933.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] Length = 315 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 107/324 (33%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + LI A +I+ G G S + Y +G Sbjct: 6 ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I ++ L + + + + M++GLP L+ +G Y AIATL + ++ I Sbjct: 66 AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + F Y L + ++ + Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ IR+N++ +++ K+ A +S AF MAGA A + Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMDINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ N+ +I + + GG ++ L V ++ Sbjct: 223 PEAAYQVQLNLQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 I + + +++ L Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292 >gi|257094128|ref|YP_003167769.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046652|gb|ACV35840.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 304 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ Y + A+ V + + +P+ Sbjct: 8 LINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGDIYMVSAFIAVTVFTLLASFGISSVPL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 S ++ + + + I I + R+ Sbjct: 68 SLLVVLLVAVFFTSIYGWTVERTAYRPLRGSTRLAPLISAIGMSIFLQNMVQLTQGARVK 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + I V +++ L A + +T+ R+ ++ Sbjct: 128 PVAPVLVGGIDILTIDGFTVRLAYSQVLIVVVTVALMAGFTWLITKTSFGRQQRSCEQDR 187 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 L + F + +A +AG + F I + +LGG Sbjct: 188 TMTALLGINVDRTISLTFMLGAALAAVAGVMVTVYYGVVDFF-IGFVAGIKAFTAAVLGG 246 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + SL ++ + + + F L LV++ R Sbjct: 247 IGSLPGAMLGGLLIGLIEAFWAAYLSAEYKDVATFT-------------ILILVLMFRPS 293 Query: 338 SLLRL 342 LL Sbjct: 294 GLLGR 298 >gi|254460948|ref|ZP_05074364.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206677537|gb|EDZ42024.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 337 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 35/338 (10%), Positives = 88/338 (26%), Gaps = 19/338 (5%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 ++ FL S I + A G++++ G L + A GA + Sbjct: 1 MIDFLNAIVALSNFVIVPAIAYGSQLALGALGVTLIYGILRFSNFAHGDTMASGAMFTIF 60 Query: 84 LGSRYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + L +P + + +F A +++ Sbjct: 61 VTWWMQSAGINLGPLPTALLALPFGILGCMILVLFTDRFVYRFYRAQKAKPVILVIVSMG 120 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + I + + + + ++ + Sbjct: 121 VMFIMNGLVRFAIGPGEQRFSDGERFIINAREFKELTGLREGLAIKTSQGITVITAVIVV 180 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + +L RT + R DN+ + + + +A AG + + Sbjct: 181 ALLFWFLNRTRTGKSMRAYSDNEDLALLSGINPERVVMYTWLLVAALATTAGVLYGLDKS 240 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV--------ELCCGMNFYYF 306 F + + + I+GG+ + ++ ++ + Sbjct: 241 F--KPFTYFQLLLPIFASAIVGGLGNPIGAIAGGFVIAFSEITITYAWKKVLIYLMPEQL 298 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 + + L +V+L + L +T Sbjct: 299 EPSGLVQLLSTDYKFAVSFVILLIVLLFKPTGLFSGKT 336 >gi|222082649|ref|YP_002542014.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727328|gb|ACM30417.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 365 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 6/307 (1%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 ++ +Y + A G ++V G L +++ IG+++ + + Sbjct: 59 SFVVFGLTIGSVYALIALGYTMVYGILRMINFAHGDVMMIGSFAGLFAALALADAGLTSA 118 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + MG + + LI ++ Sbjct: 119 APLLALPIVLAVAMGTGAAVSMTIERIAYRPFLHVRSLAPLICAIGLSFVLQYGARGLFG 178 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++ I + A + +R T + A R + ++ Sbjct: 179 TRNRAYPSFGWMEGTVNLAGLVIPIPQIVAFVFAAIALAGLAAVVRLTPLGKAMRAVSED 238 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + + FA+ A G+AG +A +I+ FS I + ILG Sbjct: 239 RDAAALVGIDVSRTIVFTFAIGGAMAGVAGVLYALVFKQITVF-IGFSLGIKGFAAAILG 297 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +L +L L + + + + L L+++ R Sbjct: 298 GIGNLGGAMLGGLVLGLAEALGPALLLEGYGLPAPY-----QLKDVIGYGMLVLILIFRP 352 Query: 337 HSLLRLR 343 LL R Sbjct: 353 QGLLGER 359 >gi|239813384|ref|YP_002942294.1| ABC transporter permease [Variovorax paradoxus S110] gi|239799961|gb|ACS17028.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 306 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 99/308 (32%), Gaps = 15/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL++V G + +L+L + GAY +R Sbjct: 10 LLNGLGYGLMLFLLAAGLTLVFGIMDVLNLAHGSLFMSGAYVAAEAHTRT---------- 59 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + + L + L + +L + I + +A Sbjct: 60 GSFTAAIVIAVAVTVVVALLLEVLLMRRLYTRDHLAQVLATFGVILVADDIVKMAWGPSP 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + Y + +L G ++ ++ L + T I R ++ Sbjct: 120 VMAPTPAALSGPIDLVDGLPYPSYRLVILAGGLLVALALYLLVNHTRIGMRVRAGASDRP 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + +A +AGA + I + ++++GG+ Sbjct: 180 MAELMGVRVGRIFNGVFLLGAALAALAGALMGPIVAV--QVGMGEAILIPALVVLVIGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335 S+ A ++ V + + L + + M + +V++ R Sbjct: 238 GSVRGAFVAALMVGVVDTVGRAFVPMLLRATLPPATAADLGPLFAEVAMYALMVVVLIFR 297 Query: 336 SHSLLRLR 343 L R Sbjct: 298 PSGLFSAR 305 >gi|220905377|ref|YP_002480689.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869676|gb|ACL50011.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 304 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 99/305 (32%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G L L++ + +GAY + + + + +P Sbjct: 8 MLNALQWGSFYALIALGYTLVYGVLRLINFAHGDIFMVGAYIAFFVSTWLISTDGMGLPQ 67 Query: 99 SAMISGACGMIMGLPSLK-FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 A++ + M L + + +A L + ++ + L Sbjct: 68 QAVLWLTIPLTMILTAFVGVTIERVAYRPLRRKGAHRLYVVITALMCGLILENGNLALLG 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + L+ + ++ +V++ + + + RT + A R + ++ Sbjct: 128 ATKRKLPELVDKTVYSFGPLVVTNLKLWVIVAAILVFLVLQTIVTRTKVGMAMRAVSWDR 187 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A + + + F + S G+ G FA + P M I+ V+ GG Sbjct: 188 FALPLMGIPLDSVIVVTFILGSGIAGLGGMLFAMCYPTLEPYMGAMIGWKAFIAAVV-GG 246 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + + +L V + + L F L L++ MR Sbjct: 247 IGDIRGAFVGGFLLAFVEIMVVAFLPSTYMDLFSFT-------------ILLLILWMRPT 293 Query: 338 SLLRL 342 + Sbjct: 294 GIFGT 298 >gi|254463056|ref|ZP_05076472.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2083] gi|206679645|gb|EDZ44132.1| inner-membrane translocator [Rhodobacteraceae bacterium HTCC2083] Length = 310 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 114/326 (34%), Gaps = 37/326 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L L+ + Y +G+ +++Y A + G +SL + IG Sbjct: 9 LIWAAVLVGLAAFWPMVTNGYWLGIGVDVMMYTALATSWMLFSGPTHYISLASAAFFGIG 68 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + S Y S W ++ +SA+I A ++GL +L+ G Y I TL ++E+ +N++ Sbjct: 69 GFVVGSGMSDYDASFWSMLALSALIGAALAALIGLATLRLSGVYFVIFTLGLAEMIRNLV 128 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + G G+YV +Y++LL + Sbjct: 129 SWVQNNFLGSRGLYVLTDFTDTH----------------------LYWMLLVTAASVYLL 166 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + R+ + A R I ++ + K+ F + F + GA A I Sbjct: 167 GWIISRSRLGFALRIIGGDETVARHVGINTATTKVILFTTTGFFAAIVGAIIAPRWSYIE 226 Query: 258 PDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ F + V+ + +LGG L + + D +F Sbjct: 227 PNQVFSPHLSFFVVIMALLGGSGRLWGPVAGVIPFLLIWNWV--------------DSNF 272 Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ A +++ H ++ Sbjct: 273 PNQSILVLGFAFLIIVYFLPHGVVGR 298 >gi|149915145|ref|ZP_01903673.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter sp. AzwK-3b] gi|149810866|gb|EDM70705.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter sp. AzwK-3b] Length = 373 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 93/347 (26%), Gaps = 36/347 (10%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+ L+ + ++ + L Y A GL + G+ G+LSL + + + Sbjct: 11 LIGFAILALIIFIALPMALDSFRLNLFGKYLTYAFVAVGLVLCWGAGGILSLGQGVFFGL 70 Query: 77 GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 G Y + + + Sbjct: 71 GGYCMAMFLKLEASTPENTSIQSTPGIPDFMDWNQLTELPIWWQPFHSLAFSLFAVVAVP 130 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174 + + A L L + + Sbjct: 131 VFFAFIIGVAMFKRRVGGVYFAIITQAFAAILTILIIGQQGYTGGVNGITDLRTLLGWDI 190 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 + +YYV + F+ I ++R++ + +RD + + K+ Sbjct: 191 RTDEAKEVLYYVNGALLFVVLFIAQFVRKSKLGRLLIAMRDQEDRVRFSGYDVAGFKIFI 250 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 F + +AF G+ GA F +SP + +I ++ +GG S+ ++ Sbjct: 251 FCLGAAFAGIGGAMFTLQVGFMSPTLVGIVPSIEMVIFCAVGGRLSILGAVYGALLVNWA 310 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 F SF + V+++ + L Sbjct: 311 KT--------------SFSESFPELWLLGLGGLFIAVVMLFPNGLAG 343 >gi|146341741|ref|YP_001206789.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146194547|emb|CAL78572.1| Putative branched-chain amino acid ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 356 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 111/328 (33%), Gaps = 17/328 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 A+ +L S Y + ++V A LS++ G G LS + Sbjct: 24 AFWALFALVLGGALAYPLFSDGYTVGNTVYFFVWVFIALSLSLIWGYGGSLSFGQTAFFG 83 Query: 76 IGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 I Y Y IL + W+ + ++ ++ ++G R + + + ++ Sbjct: 84 IAGYGYGILTINFGASYGFTWIALLLAIGMAALVAALLGYFMFFGRIGGVFLGIVTLAVT 143 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + + + + L + + ++ +YYV+LG+ Sbjct: 144 LMLERFMAQTAGPEWRIGAARLNGFNGMSAMPPLTIPWFGGPIVLFADVGLYYVVLGILV 203 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 L + L ++ N IR+N + L I +L F + +A G++G + Sbjct: 204 LVYLGLRILMNSSFGNVIVAIRENPERAEMLGYDIRKYQLITFVIGAALAGLSGVLYTVW 263 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 I+P + + + V +GG + L+ T ++ + Sbjct: 264 GQYITPSSMGMTAASLPLIWVAVGGRSDLTATVIGTLVV--------------LSGFQAL 309 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLL 340 + M + L L +L+ + L+ Sbjct: 310 TIYGSQYALVFMGVLLVLTVLIAPNGLV 337 >gi|187928539|ref|YP_001899026.1| inner-membrane translocator [Ralstonia pickettii 12J] gi|187725429|gb|ACD26594.1| inner-membrane translocator [Ralstonia pickettii 12J] Length = 330 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 27/321 (8%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + L+ M + GL+++ +G+L+ Y +GAY ++ W + Sbjct: 22 NLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVVSGYL--GFWTALI 79 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 V+ ++ GA G ++ L+ Y +A L+ + ++ + + G L Sbjct: 80 VAPLLVGALGAVVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 130 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + V + F + + +++L + I L L RT I + + Sbjct: 131 AVPYRVPDALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 190 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +L + + F A G+AG ++ + IV + ++GG Sbjct: 191 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 248 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL------- 330 M SL A+ ++ + ++ + L K + N + V L + Sbjct: 249 MGSLVGAFVASLLIGCIQTFAVTLDISVTSVLGKIGVTLNPDVPLISVWNLTIAQVAPVL 308 Query: 331 -------VILMRSHSLLRLRT 344 +++ R L+ R Sbjct: 309 PYLLLVLMLIFRPRGLMGTRE 329 >gi|282849000|ref|ZP_06258389.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Veillonella parvula ATCC 17745] gi|282581275|gb|EFB86669.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Veillonella parvula ATCC 17745] Length = 293 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 100/308 (32%), Gaps = 27/308 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A GL++V G L ++++ + IGA+ + + + + ++I++ + V Sbjct: 6 LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFDVNIFVALIV 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G ++ + + +A LI + L + G Sbjct: 66 AMAVGAILGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + M + + + ++T I A R + + Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSVVLMLILNIVI-----------KKTKIGKAIRAVSMS 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++SA AG S + I P M ++++ILG Sbjct: 175 TETAALLGINPTMIISVTVMIASALGSAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +++ IL F + F + L++ R Sbjct: 234 GLGNITGAMVGGFILGVAEIFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280 Query: 337 HSLLRLRT 344 L + Sbjct: 281 QGLFGSKD 288 >gi|294084498|ref|YP_003551256.1| branched-chain amino acid ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292664071|gb|ADE39172.1| branched-chain amino acid ABC transporter, permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 303 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 89/305 (29%), Gaps = 18/305 (5%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +I ++Y + A G+S++ L ++ Y GA+ ++L + GL + + Sbjct: 10 AFIIFGVTIGVVYGIVALGISLIYSGLDIVHFAHGEMYMFGAFFGLVLANNVGLPYPVAL 69 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++ GM + + T+ + + N Y Sbjct: 70 IGAMIMTACLGMFVERVFYRRLTSAGGGYTVAGMGMIICGFGMSVALVNVA---YFIWGA 126 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + L A++ +LR T A R + N Sbjct: 127 EAEPFRANLDYIPRLQFAGDIEVPESYVLTAIISVVLMAALHYFLRHTKTGLAVRAVAHN 186 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + + + F +S A AG + + + + ++G Sbjct: 187 KDIAYLMGINVPLMISLIFGLSCALAAAAGVLIGPMQSV--QVEMGYLMLMKAFAAAVVG 244 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G SL ++ L + F + L LV++ R Sbjct: 245 GFGSLPGAILGGIMVGIFENLGAAYISPSHKDIYAF-------------LLLILVLMFRP 291 Query: 337 HSLLR 341 L Sbjct: 292 SGLFG 296 >gi|148259376|ref|YP_001233503.1| inner-membrane translocator [Acidiphilium cryptum JF-5] gi|146401057|gb|ABQ29584.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Acidiphilium cryptum JF-5] Length = 300 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 93/305 (30%), Gaps = 17/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ +GA+ + + G + + Sbjct: 8 VFNGLTVGGIYALIALGYTMVYGVMRLINFAHGDLCILGAFIGLTFLTSLGGAGHPGAAL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + A +++ + + + + + + ++ Sbjct: 68 LILAFVAAIVVVAVAGVVLELAAYRPLRKADRLAAVVSALGASLLIENGIMLIWSPQVSV 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +++ L A++ L++ T A R +Q Sbjct: 128 FPSGLLPTTTYH---IAGASISFVQVMIIIVSFLLMAALYLFVNHTRFGTAIRAAAIDQD 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + S F + A + G F + M ++ + ILGG+ Sbjct: 185 AARLMGINVNRVIASVFVIGPALGAVGGLFIGVYYREVYFTM-GWTYGLYAFIAAILGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L G + + F L ++L+R Sbjct: 244 GNIPGAMLGGILLGLFNAFAAGYISSSWQDAITF-------------ALLIGILLVRPSG 290 Query: 339 LLRLR 343 LL R Sbjct: 291 LLGER 295 >gi|327400707|ref|YP_004341546.1| ABC transporter integral membrane subunit [Archaeoglobus veneficus SNP6] gi|327316215|gb|AEA46831.1| ABC-type transporter, integral membrane subunit [Archaeoglobus veneficus SNP6] Length = 348 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 119/341 (34%), Gaps = 52/341 (15%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + S+ I +Y++ A L++ G G+ + +A +GA + + +R + ++ Sbjct: 7 VISILIWFGLYLIIAISLNLEYGYGGIPNFGRALAALMGAIAVGAVVNRILILMFGITGS 66 Query: 94 ----------------------------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + +S ++ G + LPS K DYLAI Sbjct: 67 ITTASGIAKSTINEIIAQNPAVGIGLLLFTLLISGILGIVVGALFILPSAKLESDYLAIT 126 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 L +SE+ + I G G+ + L F+ + L+ Sbjct: 127 LLAISEVAYMVCYYNTDIMGGYYGVPTPNVLAFIPGEWKDLVFMC--------------- 171 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++L + + L T R R+N+ + ++ ++ AV S M+ Sbjct: 172 LILLVALVVYFFAERLLNTPYGRLLRATRENENVVRAFGKDVMKIRIKTVAVGSGIASMS 231 Query: 246 GAFFAASRDRISPDMFKFS---ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302 GA ++ +S + FS +V+LGG+ + +A + + +L Sbjct: 232 GALYSFYTGNVSGIVNLFSRVEWTFFPFLMVLLGGLGNNRGVAVGVLTFVTIRKLLEVY- 290 Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + N L + + L++ R L++ + Sbjct: 291 KHEITRFFALPFDVNWLQYILFGVMMLLILYYRPDGLIKEK 331 >gi|291279876|ref|YP_003496711.1| branched-chain amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754578|dbj|BAI80955.1| branched-chain amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 294 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 103/306 (33%), Gaps = 23/306 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 I + + IY + A G +++ + G+++ IGAY + L + + + Sbjct: 6 NLIITGLVVGSIYALLALGFTLIYKATGVVNFAQGELLLIGAYICLYLTTSFKIPFIPSF 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + G ++ L+ I+ ++++ ++L I G Sbjct: 66 VLTFVFMFFFGFLIEKVFLRKMIGEPIISIIMLTIGLSSVLKSIVQIFWGTDTRVFPQIF 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++ + + S + I + ++ +++ A R + + Sbjct: 126 STKPISLFGIKVSQVYIFSVISVIISL-----------GIFSVFFKKSKAGVAMRAVASD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 Q+A S+ I A+A+++ + G F + + V VILG Sbjct: 175 QQAALSMGIEIKKVFALAWAIAAVVSAIGGVFVGNINGVNTNLAQ---FGLKVFPAVILG 231 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S++ ++ + L G I + +V++++ Sbjct: 232 GLDSITGAIVGGLVIGVLENLVGGYIDPIIGGG---------AKEVFPFIFMIIVLMIKP 282 Query: 337 HSLLRL 342 + L Sbjct: 283 YGLFGT 288 >gi|167549222|ref|ZP_02342981.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325635|gb|EDZ13474.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 308 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + LI + L + +T G Sbjct: 72 LVAAGFIGAIIIASAYGWSIERVAYWPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWIVGSSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|269797727|ref|YP_003311627.1| inner-membrane translocator [Veillonella parvula DSM 2008] gi|269094356|gb|ACZ24347.1| inner-membrane translocator [Veillonella parvula DSM 2008] Length = 293 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 100/308 (32%), Gaps = 27/308 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A GL++V G L ++++ + IGA+ + + + + ++I++ + V Sbjct: 6 LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTIFNVNIFVALIV 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G ++ + + +A LI + L + G Sbjct: 66 AMAVGAILGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + M + + + ++T I A R + + Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSVVLMLILNVVI-----------KKTKIGKAIRAVSMS 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++SA AG S + I P M ++++ILG Sbjct: 175 TETAALLGINPTMIISITVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +++ IL F + F + L++ R Sbjct: 234 GLGNITGAMVGGFILGVAEIFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280 Query: 337 HSLLRLRT 344 L + Sbjct: 281 QGLFGSKD 288 >gi|23500146|ref|NP_699586.1| branched-chain amino acid ABC transporter permease [Brucella suis 1330] gi|161620465|ref|YP_001594351.1| branched-chain amino acid ABC transporter, permease protein [Brucella canis ATCC 23365] gi|254699649|ref|ZP_05161477.1| branched-chain amino acid ABC transporter, permease protein [Brucella suis bv. 5 str. 513] gi|254702788|ref|ZP_05164616.1| branched-chain amino acid ABC transporter, permease protein [Brucella suis bv. 3 str. 686] gi|254706096|ref|ZP_05167924.1| branched-chain amino acid ABC transporter, permease protein [Brucella pinnipedialis M163/99/10] gi|254711606|ref|ZP_05173417.1| branched-chain amino acid ABC transporter, permease protein [Brucella pinnipedialis B2/94] gi|254712220|ref|ZP_05174031.1| branched-chain amino acid ABC transporter, permease protein [Brucella ceti M644/93/1] gi|254715291|ref|ZP_05177102.1| branched-chain amino acid ABC transporter, permease protein [Brucella ceti M13/05/1] gi|256015177|ref|YP_003105186.1| branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|256029760|ref|ZP_05443374.1| branched-chain amino acid ABC transporter, permease protein [Brucella pinnipedialis M292/94/1] gi|260167152|ref|ZP_05753963.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. F5/99] gi|260568303|ref|ZP_05838772.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40] gi|261217019|ref|ZP_05931300.1| branched-chain amino acid ABC transporter [Brucella ceti M13/05/1] gi|261313533|ref|ZP_05952730.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261319229|ref|ZP_05958426.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|261319889|ref|ZP_05959086.1| branched-chain amino acid ABC transporter [Brucella ceti M644/93/1] gi|261750113|ref|ZP_05993822.1| branched-chain amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261753387|ref|ZP_05997096.1| branched-chain amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|261756554|ref|ZP_06000263.1| bacterial inner-membrane translocator [Brucella sp. F5/99] gi|265986771|ref|ZP_06099328.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis M292/94/1] gi|23463743|gb|AAN33591.1| branched-chain amino acid ABC transporter, permease protein [Brucella suis 1330] gi|161337276|gb|ABX63580.1| branched-chain amino acid ABC transporter, permease protein [Brucella canis ATCC 23365] gi|255997837|gb|ACU49524.1| branched-chain amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|260154968|gb|EEW90049.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40] gi|260922108|gb|EEX88676.1| branched-chain amino acid ABC transporter [Brucella ceti M13/05/1] gi|261292579|gb|EEX96075.1| branched-chain amino acid ABC transporter [Brucella ceti M644/93/1] gi|261298452|gb|EEY01949.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|261302559|gb|EEY06056.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261736538|gb|EEY24534.1| bacterial inner-membrane translocator [Brucella sp. F5/99] gi|261739866|gb|EEY27792.1| branched-chain amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261743140|gb|EEY31066.1| branched-chain amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|264658968|gb|EEZ29229.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis M292/94/1] Length = 294 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 18 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L A + + +I + G + Sbjct: 78 LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + A R + ++ A + + Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + + + ++ L+++++ L Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285 >gi|292489949|ref|YP_003532841.1| branched-chain amino acid ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292900981|ref|YP_003540350.1| high-affinity branched-chain amino acid ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291200829|emb|CBJ47963.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291555388|emb|CBA23792.1| branched-chain amino acid ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] Length = 308 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 95/312 (30%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y I+ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMLGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 V+ +I+ G + + K + LI + L + +T G Sbjct: 72 LIGCGFVVAVVIASCYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L V + ++ L++R + + A Sbjct: 129 ----RDLALPGLVSGQWTLGVSNGFAATISTMQLMIWGVTFLAMLALTLFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFLAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L + Sbjct: 244 TAAVLGGIGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIV 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|146342355|ref|YP_001207403.1| putative branched-chain amino acid ABC transporter permease/livM-like protein [Bradyrhizobium sp. ORS278] gi|146195161|emb|CAL79186.1| putative branched-chain amino acid ABC transporter (permease protein); livM-like protein [Bradyrhizobium sp. ORS278] Length = 322 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 62/313 (19%), Positives = 121/313 (38%), Gaps = 29/313 (9%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + ++ I ++I + A G +I+ G GL S + GAY+ +L +R+G+ Sbjct: 20 PFLGLSGALLNLMIFMMITALAAQGWNILGGYAGLSSFGHAAFFGAGAYAMAVLQTRFGV 79 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 + W+ + + + G +G S + +G Y A+ TL +E+ + IL T G A Sbjct: 80 NAWIALVIGIALGALVGAAIGFLSFRSGLKGSYFALITLAFAEVAR-ILANSTNFTGGAA 138 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 GI + + + + LG + + WL + Sbjct: 139 GILLKLQTGLPYLQFADRR--------------YFLLIALGFVAIGLLVSWWLEHSRFGA 184 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENI 267 +R+N++A +L + K+ A A+S A AG +A + I + F +I Sbjct: 185 YLVALRENEQAAQALGVDVFAVKMKAIAISGALTAAAGCLYAQNYLFIDANVAFGSWISI 244 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + I+GG ++ +L+G+ EL G++ + + Sbjct: 245 EALFAAIVGGSGTVLGPMLGAIVLLGLGELTKGLSG-----------GIPGMDLMVFGVI 293 Query: 328 LFLVILMRSHSLL 340 L L + + L+ Sbjct: 294 LVLSVAFSPNGLV 306 >gi|26250069|ref|NP_756109.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli CFT073] gi|170680877|ref|YP_001745705.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli SMS-3-5] gi|215488732|ref|YP_002331163.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O127:H6 str. E2348/69] gi|218550719|ref|YP_002384510.1| branched-chain amino acid transporter permease subunit LivH [Escherichia fergusonii ATCC 35469] gi|218702202|ref|YP_002409831.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli IAI39] gi|218707051|ref|YP_002414570.1| branched-chain amino acid permease LivH [Escherichia coli UMN026] gi|293407038|ref|ZP_06650962.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli FVEC1412] gi|293412877|ref|ZP_06655545.1| conserved hypothetical protein [Escherichia coli B354] gi|298382784|ref|ZP_06992379.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli FVEC1302] gi|300898846|ref|ZP_07117149.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 198-1] gi|300936485|ref|ZP_07151405.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 21-1] gi|300985253|ref|ZP_07177350.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 45-1] gi|306816200|ref|ZP_07450338.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli NC101] gi|312968232|ref|ZP_07782442.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli 2362-75] gi|331649261|ref|ZP_08350347.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli M605] gi|331659752|ref|ZP_08360690.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli TA206] gi|331665065|ref|ZP_08365966.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli TA143] gi|331674941|ref|ZP_08375698.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli TA280] gi|26110498|gb|AAN82683.1|AE016768_101 High-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli CFT073] gi|170518595|gb|ACB16773.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli SMS-3-5] gi|215266804|emb|CAS11245.1| high-affinity branched-chain amino acid transport system; membrane component; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|218358260|emb|CAQ90907.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|218372188|emb|CAR20050.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] gi|218434148|emb|CAR15065.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|281180484|dbj|BAI56814.1| leucine ABC transporter ABC transporter permease component [Escherichia coli SE15] gi|284923447|emb|CBG36542.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Escherichia coli 042] gi|291425849|gb|EFE98883.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli FVEC1412] gi|291468524|gb|EFF11017.1| conserved hypothetical protein [Escherichia coli B354] gi|298276620|gb|EFI18138.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli FVEC1302] gi|300357467|gb|EFJ73337.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 198-1] gi|300408124|gb|EFJ91662.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 45-1] gi|300458407|gb|EFK21900.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 21-1] gi|305850596|gb|EFM51053.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli NC101] gi|312287057|gb|EFR14967.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli 2362-75] gi|315291691|gb|EFU51047.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 153-1] gi|315295975|gb|EFU55284.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 16-3] gi|323174094|gb|EFZ59722.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli LT-68] gi|323188953|gb|EFZ74237.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli RN587/1] gi|323966121|gb|EGB61558.1| branched-chain amino acid transport system/permease component protein [Escherichia coli M863] gi|323974902|gb|EGB70013.1| branched-chain amino acid transport system/permease component protein [Escherichia coli TW10509] gi|324111778|gb|EGC05758.1| branched-chain amino acid transport system/permease component protein [Escherichia fergusonii B253] gi|325499006|gb|EGC96865.1| branched-chain amino acid transporter permease subunit LivH [Escherichia fergusonii ECD227] gi|327251091|gb|EGE62784.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli STEC_7v] gi|330909495|gb|EGH38009.1| high-affinity branched-chain amino acid transport system permease protein LivH [Escherichia coli AA86] gi|331041759|gb|EGI13903.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli M605] gi|331052967|gb|EGI25000.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli TA206] gi|331057575|gb|EGI29561.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli TA143] gi|331067850|gb|EGI39248.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli TA280] Length = 308 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMLGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|84499957|ref|ZP_00998223.1| ABC transporter permease protein [Oceanicola batsensis HTCC2597] gi|84391891|gb|EAQ04159.1| ABC transporter permease protein [Oceanicola batsensis HTCC2597] Length = 305 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 15/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + ++ + A GL++V G + +++L + Y +GAY + G W L+ + Sbjct: 9 LLNGVQLGVLLFLIAAGLTLVFGIMDVINLAHGVLYMVGAYLIATFAALTGSFWWGLLLM 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +I + + L +L + + + + Sbjct: 69 LPAAVVVGLLIEVVIIRR----------LYARSHLDQVLATFGLVMIASELVEIVWGTSP 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + ++ + Y ++ V+L ++A + + + T I R N+ Sbjct: 119 LSVPMPEMLSGSVPLMGPLRYPVYRIAVILAGLAVAAGLYVVVNHTRIGMLLRAGATNRM 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L I F + + +AGA A S I+ +V++GG+ Sbjct: 179 MVSALGVDINKLFAIVFTLGAVLACLAGALVAPILSV--DTGMGESVLILAFVVVVIGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMR 335 S+ ++ V L + SLL + M L+ I + +++ R Sbjct: 237 GSIKGAFLGALLVAVVDTLGGVFGPFLLRSLLDPAAAGQMGRVLAPMLVYILMAVILFAR 296 Query: 336 SHSLLRLR 343 L R Sbjct: 297 PAGLFGRR 304 >gi|307945757|ref|ZP_07661093.1| monosaccharide-transporting ATPase [Roseibium sp. TrichSKD4] gi|307771630|gb|EFO30855.1| monosaccharide-transporting ATPase [Roseibium sp. TrichSKD4] Length = 360 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 91/313 (29%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + L S + + Q+ I + A S+V+ + G + L+ Sbjct: 52 LIVLVLSIAIFGILLGSKFFSPFAMTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIM 110 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + + RYGL + + + CG I G + + + + Sbjct: 111 VLSSVVMGQVTFRYGLPAEIAVLCGLICGTICGYINGFLVAVVKLPPFIVTLGMWQIVLA 170 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + T I L F + I Y ++ M L Sbjct: 171 TNFLYSANETIRSQDISANAPLLQF------------FGNKVNIGGAIFTYGVIFMVLLV 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + LR+TA + D+ +A + +S + +S AG Sbjct: 219 IVLAYALRQTAWGRHVYAVGDDPEAAQLSGVQVKKTLISVYMISGLICAFAGWAMIGRIG 278 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 ISP + + + ++VI GG S+ I+ + + Sbjct: 279 SISPTTGQLANIESITAVVIGGISLFGGRGSILGSLFGALIVGVFTLGLRLLGADAQWTY 338 Query: 310 LKFDCSFNMRHTT 322 L Sbjct: 339 LLIGLLIIAAVAV 351 >gi|90410176|ref|ZP_01218193.1| Putative ribose ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90329529|gb|EAS45786.1| Putative ribose ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 329 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 30/313 (9%), Positives = 84/313 (26%), Gaps = 25/313 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + ++ +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 31 LIALILLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 89 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + +I + + + + + + F Sbjct: 90 LCGAFAATMIGLEIPAIIAVPTALLAGAALGAISGVIIAK------------GKVQAFIA 137 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T V +F + I V++ Sbjct: 138 TLVTMTLLRGVTMVYTDGRPISTGFTDVADSFAWFGTGYAMGIPVPIWLMVIVFASIWYL 197 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 198 L-----NHTRFGRYIYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 252 Query: 256 ISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 P + I+ V+LGG + I+ + ++ + + Sbjct: 253 AQPTA-GMGYELDAIAAVVLGGTSLAGGKGRIMGTLVGALIIGFLNNALNLLDVSSYYQM 311 Query: 310 LKFDCSFNMRHTT 322 + + Sbjct: 312 IAKAVVILLAVLV 324 >gi|332654586|ref|ZP_08420329.1| high affinity branched-chain amino acid ABC transporter, permease protein [Ruminococcaceae bacterium D16] gi|332516550|gb|EGJ46156.1| high affinity branched-chain amino acid ABC transporter, permease protein [Ruminococcaceae bacterium D16] Length = 383 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 67/345 (19%), Positives = 139/345 (40%), Gaps = 42/345 (12%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG-AYSYVILGSR---------- 87 + + + +Y + A +++V G GL SL + AY+Y IL Sbjct: 38 LFVVLKKGAVYSLVAVSMNLVNGFTGLFSLGQAGFMLL-GAYTYAILTVPVSAKDTVYYL 96 Query: 88 ----------------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 L + L I + ++ ++GLP L+ + DYLAIA Sbjct: 97 FGGSAVKFSLPDLFGGVDTPAGLILGVLLAIILGGCVAAFFAYLIGLPVLRLKSDYLAIA 156 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL +EI + I +W+ + G + T + + F SS + + Sbjct: 157 TLGFAEIIRAIF-QWQALGPITNGANMI-------TQIPTFNNFNITDSSGKVVLYLSSF 208 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + + + +II+ L ++ A++ IR+++ A ++ + K+ +F +SS F G+ Sbjct: 209 FPMLIMIICVAIIVMLINSSYGRAFKAIREDEIAAEAMGINLAKHKMLSFVISSFFSGVG 268 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA FA + ++ + ++ IV++GG+ S+S +T + + E Sbjct: 269 GALFAMFANNAQAKVYTSTMTYEILLIVVIGGIGSISGSVLSTFLYVACSEWWLRGLDMG 328 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 +K N + + + +V+L ++ + ++ L+ Sbjct: 329 SFLGIKLGLFRNGFRMVVFSVVIMIVVLFFRQGIMGNKEITDLLK 373 >gi|301050320|ref|ZP_07197209.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 185-1] gi|300297949|gb|EFJ54334.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 185-1] Length = 308 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 99/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90 + + Y + A G ++V G +G+++ Y IG+Y ++ + L Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMVLGIDTGWL 71 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|17230030|ref|NP_486578.1| permease protein of branched-chain amino acid ABC transporter [Nostoc sp. PCC 7120] gi|17131630|dbj|BAB74237.1| permease protein of branched-chain amino acid ABC transporter [Nostoc sp. PCC 7120] Length = 308 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 115/307 (37%), Gaps = 31/307 (10%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---------RYGLSIW 93 I ++ + G LSL YA+G Y IL + + Sbjct: 11 LIVSMVLGALLGLSLYLPLMAGQLSLASPGFYALGGYIAAILSTKVFQTNSNSFPIPLLL 70 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 L + ++A++SG G+ +G+P+L+ RG YLAIAT+ E+ + + + IT G GI+ Sbjct: 71 LEMLIAAVVSGLLGIAVGIPALRLRGIYLAIATIAFVEVLRVLSLNL-DITGGAVGIFGI 129 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + I ++ L + +S + L R + A+ I Sbjct: 130 PQPFQ--------------------TPIEYLWITLPLLLISMVLFYRLERVRVGRAFTAI 169 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 R+++ A ++ + K+ AF + + G+ G A + + F +II ++ V Sbjct: 170 REDELAAGAMGINPTYYKVLAFTLGAMLAGIVGVISAHFLNTWNARQGTFDASIIYLTFV 229 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ++GG + + + E+ G+ + + + + Sbjct: 230 LIGGSRTFLGSVVGGMVFTALPEVLRGLAD-TGGFPTWLAQFLRDGRLIIFGLLIVTGTI 288 Query: 334 MRSHSLL 340 L+ Sbjct: 289 FFPQGLV 295 >gi|218777930|ref|YP_002429248.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] gi|218759314|gb|ACL01780.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01] Length = 295 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 96/306 (31%), Gaps = 25/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY M A G ++ S +++ +GA+ L ++ LS W + + Sbjct: 11 ILNGVAIGCIYGMVALGFVLIYKSTEVINFAQGELLMLGAFISYSLITQLHLSYWTALVI 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G G I+ L+ A +I++ + + Sbjct: 71 TILAMGIVGAILERVVLRSLVGEPTYAIVIVTIGISYFIRSVV---------SMVPGWGT 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R+ V+ +++ L A + ++ + + A R NQ Sbjct: 122 DTYGFRTPFTDKFLRWGDVVISYEYLSIVVLAFVLIAVVFVFFGYSRMGTAMRATSQNQL 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + ++ + +++A G+ G A M + + +LGG Sbjct: 182 AAVYMGISVTRVFSLTWTIAAALGGIGGILLAPITFV---HMNMGFIGLKAVPAAVLGGF 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 TS I+ L + + + I L V+++R Sbjct: 239 TSPPGAIVGGLIIGITESLAGVYLEEGWKDIAAW-------------IILIAVLIIRPQG 285 Query: 339 LLRLRT 344 L ++ Sbjct: 286 LFGIQE 291 >gi|307543704|ref|YP_003896183.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307215728|emb|CBV40998.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 335 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 34/329 (10%), Positives = 90/329 (27%), Gaps = 20/329 (6%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + + + IY M A G++++ + GA+ ++L + + + Sbjct: 6 FFINNVVIAGSVSGSIYAMGAVGVTLIFSIMRFAHFAHGDMMTFGAFMVLLLTTLFPQAG 65 Query: 93 WLLIPVSAMISGA--CGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-----IKWKPITN 145 + + ++ + GL R Y + + I I + + + Sbjct: 66 AAIGVPTPILMLPLAMVLTAGLAVGIDRTFYRPLRAHGVKPIVMVIASLGVTLMLQGLIR 125 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 AG + + L V+ Y+ + ++ +L R+ Sbjct: 126 LFAGTGGSSLYVDDRKEIFRLPIPIEGVRMPVVITEPQLYLFVLTIICVVALHFFLSRSR 185 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + A R + DN + + ++ +AG + F Sbjct: 186 LGKAMRAMSDNPDLAQASGINTNTIVAVTWMLAGGLAAIAGTLLSLDVTF--KPDLSFFL 243 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVEL-----------CCGMNFYYFNSLLKFDC 314 + + + I+GG+ ++ L + Sbjct: 244 LLPIFAAAIVGGVGHPFGAVAGGFVVGFAESLAVFNWSVLLRPFRDSLPEWLALPSNLSF 303 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + L +++ R + + + Sbjct: 304 VGTEYKIVVPFFILVAILVWRPTGIFKGK 332 >gi|170697126|ref|ZP_02888221.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria IOP40-10] gi|171315465|ref|ZP_02904702.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5] gi|170137962|gb|EDT06195.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria IOP40-10] gi|171099465|gb|EDT44200.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5] Length = 345 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 97/326 (29%), Gaps = 18/326 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + F + + V+ + S+ + + A + V+ Sbjct: 25 ARFFNPAARQKLLAFASLVLLIAFFSFASPNFLDVDNLVSILQATAVNGVLAVACTYVII 84 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + G + L+ A ++ +++G+ + L I + G + G K + Sbjct: 85 TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALCFGALSGSVSGFVIAKMKVPP 143 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + G + + R + T +I + Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGSLIPAL 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +L + ++ + L RT + N++A + K++ + S A Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296 G+AG A+ + P + + E + ++VI GG S+ I+ + Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322 M+ + + Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337 >gi|157370789|ref|YP_001478778.1| inner-membrane translocator [Serratia proteamaculans 568] gi|157322553|gb|ABV41650.1| inner-membrane translocator [Serratia proteamaculans 568] Length = 316 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 97/317 (30%), Gaps = 19/317 (5%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW------ 93 + + IY + A G ++V G L +++ +GA S + Sbjct: 9 VNGLMLGSIYALIALGYTMVYGILRIINFAHGDVLMVGALSALSTLGVLQHHFPGLSPYV 68 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 L V+ + M + + + + +A LI +L + + + Sbjct: 69 MLLLAALVAMAVCALVSMSIERLAYRRLRNAPRLAPLISGIGVSLLLQTLAMLIWSRNPL 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L + + + L + ++L + + A Sbjct: 129 MFPQLLPMSPIALTQGSAEH----APAVITGTGIATLGVAVLVMLGLLLLVEHSRFGRAM 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R +N + + + FA+ A +AG A++ M F I Sbjct: 185 RATAENPQVASLMGIDPNRIIILTFALGGALAAIAGIMMASNYGNAGFSM-GFLPGIKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ +L A+L G++ + L + + L Sbjct: 244 TAAVLGGIGNLR-----GAMLGGLLLGLFESLGTGYLGELTGGTFGSNYQDVFAFLILIA 298 Query: 331 VILMRSHSLLRLRTPSN 347 V+++R LL R + Sbjct: 299 VLVLRPSGLLGERVATR 315 >gi|39937096|ref|NP_949372.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] gi|39650954|emb|CAE29477.1| possible branched-chain amino acid ABC transporter, permease protein [Rhodopseudomonas palustris CGA009] Length = 433 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 113/328 (34%), Gaps = 32/328 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L+ L L + + + I ++FA +I++G G+LS + Y +G Sbjct: 24 LWIATALVLLLLPKLFASGGSLTTFSLVGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83 Query: 79 Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 + ++ +++ + + + + ++G + G A+ +L ++E+ Sbjct: 84 FLAIHTINILGFNKWPIPLPFVPLIGGFAGLFFAALIGWVMTQRSGTAFAMISLGLAELV 143 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + + G+AGI + + F+ +I +YY++ + Sbjct: 144 ASSALILRSFFGGEAGIS------------ANRTKLFKVFGLSFGPQIQIYYLVAAWTLI 191 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + L RT + +RDN + + + AF S F G+AGA A + Sbjct: 192 AIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFSGFFAGIAGALAAINF 251 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + + ++ V+ +GG+ + + + + Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTVLSLVLSDL------------ 299 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +V+L + Sbjct: 300 ---TQVWQLYFGLFFIIVVLFAPGGITG 324 >gi|150395331|ref|YP_001325798.1| monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419] gi|150026846|gb|ABR58963.1| Monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419] Length = 360 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 94/293 (32%), Gaps = 18/293 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + L G S + + Q+ I + ++V+ + G + L+ Sbjct: 52 LIVLILSVIIFGVLLGGKFFSAFTMTLILQQMAIVGIVGAAQTLVILTAG-IDLSVGAIM 110 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYG+ L + + CG I G + + + + + Sbjct: 111 VLSSVVMGQFAFRYGVPPVLSVLCGLGVGALCGYINGTLVARMKLPPFIVTLGMWQIVLA 170 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + T I + F +F I Y ++ M L Sbjct: 171 SNFLYSANETIRAQAIAADAPILQF------------FGQNFRIGNAVFTYGVVAMVLLV 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + L RTA + D+ +A + +S + +S +AG Sbjct: 219 ALLWYALNRTAWGRYVYAVGDDPEAAQLSGVNVKRMLISIYTLSGLICALAGWALIGRIG 278 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302 +SP +F+ + ++VI GG S+ + I+ M Sbjct: 279 SVSPTAGQFANIESITAVVIGGISLFGGRGSIMGMLFGALIVGVFSLGLRLMG 331 >gi|72161696|ref|YP_289353.1| branched chain amino acid ABC transporter permease [Thermobifida fusca YX] gi|71915428|gb|AAZ55330.1| similar to ABC-type branched-chain amino acid transport system permease component [Thermobifida fusca YX] Length = 314 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 108/303 (35%), Gaps = 41/303 (13%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + + + A + + + G+ S V +Y +GAY+ IL RY + ++ I + Sbjct: 9 IVLIEATFLNFLLALSIQVPLRV-GVFSFAGVGSYGLGAYTAAILTIRYDVPAFVAIGAA 67 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + + G + L + G YLA+AT+ I + +T G G+Y A Sbjct: 68 VVFAAVVGYLFSLIVARLNGLYLAMATIAFVLIISVLATNGGELTGGANGLYGALSDLTT 127 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 G ++ +C + A ++ R + +R++ + Sbjct: 128 GG-------------------------VVAVCVVVAFLLALTERGPLRRRIEAVREDPEL 162 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 S+ ++ + AF VS A AGA A R +SP+ F ++ +++VI+GG Sbjct: 163 SMSMGIGVVTVRQLAFTVSGALGACAGAMNALLRTTVSPEEINFHLIVLALTMVIIGGSR 222 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S I + + + + + L + L Sbjct: 223 SWMGAFIGAVIFTWLPSMLAT---------------TGRWQDVVYGLIIILAAIFMPTGL 267 Query: 340 LRL 342 L L Sbjct: 268 LGL 270 >gi|158313135|ref|YP_001505643.1| ABC transporter related [Frankia sp. EAN1pec] gi|158108540|gb|ABW10737.1| ABC transporter related [Frankia sp. EAN1pec] Length = 1087 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 101/277 (36%), Gaps = 7/277 (2%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A+ + L + I+ + ++VG G LSL + I A Sbjct: 311 ALGITVGCALVAVWWLLPASWVNALNANAIWATIILSVVVLVGFTGQLSLAQLAFSGIAA 370 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 L + G + + V + G++ LP+L+ RG LA+ TL + +L Sbjct: 371 LIAGRLVATRGWPLEAALVVGVAGTAVVGVLFALPALRTRGLQLAVVTLGLGAAVDALLF 430 Query: 139 KWKPITNGKAGIYVADR-LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + + L L T F V + + L L Sbjct: 431 QRGYHSPAASPLGALFGDLGTLEGTEVGDATLFGISLDKVTHPRGFATLSLLTFVLLGLA 490 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-- 255 + LRR +R N++A +L +++ AKL AFA+S+A G G +A Sbjct: 491 VANLRRGRAGRRLIAVRTNERAAAALGISVVGAKLYAFALSAAIAGFGGVLYAFYTYGER 550 Query: 256 ----ISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 +F +I++I+ ++GG+ +S Sbjct: 551 GNIDYGGGLFSPFASILLIAYAVVGGVGWISGSFAGA 587 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 90/290 (31%), Gaps = 12/290 (4%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y +Y + A G+ ++ G+L++ A AY++ +GL Sbjct: 7 YALLSLGAGALYALVATGVVVIQRGAGVLNMAQGALLAWAAYAFHGARDEWGLPAAPAAV 66 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ + A G++ L+ A+ L+ + ++ + G L Sbjct: 67 LAVGSTMAVGLVFHQLVLRPMRQATAVLRLMATLGLLIVIQSLLTLMYGGDVRRSPTVLP 126 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 T+ + + L + + A + R T + A + +N Sbjct: 127 TGKVTLFD-----------TAVGVDVLVRLAVVAAVVAGLWAVFRFTTLGLAATAVTENP 175 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +A SL + A+ SA G+ G A ++ +S + +++ ++ Sbjct: 176 QAAASLGWSPDAVASWAWLAGSALAGLGGVLLAPLQNPLSAGGL-MLLIVPGLAVALVAR 234 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 SL + L V + D + + + Sbjct: 235 FRSLPAVLVGALALGIVELETQVYLVADHPAWRGVDRAVPLAVIVFYLAV 284 >gi|84499453|ref|ZP_00997741.1| ABC branched chain amino acid transporter, inner membrane subunit [Oceanicola batsensis HTCC2597] gi|84392597|gb|EAQ04808.1| ABC branched chain amino acid transporter, inner membrane subunit [Oceanicola batsensis HTCC2597] Length = 335 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 111/323 (34%), Gaps = 11/323 (3%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + + L + + + +G + I +++ + G+LS + A Sbjct: 12 FFISLAAFAIAGLLLPMVANRGVVFLGGVVAINMVYGIAFNFAFQKAGILSFGNAMFVAA 71 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL-IMSEIFQN 135 GAY+ L ++ +L++ + + +SGA ++ R + A + + + Sbjct: 72 GAYTTGYLVTQVPQIPFLMVILLSGLSGAILAMITGLLALRRSSGVYFAVITLAVGELIH 131 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L+ G+ R F + YY +L +C L Sbjct: 132 VLVTKLTFLGRNDGLVGVYRPTL----------NFGLFEIDLGQGNAYYYFILVVCLLLI 181 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + + + + +T++ ++ L T KL A +S A + GA FA Sbjct: 182 AGLWVVWSNRFGRSLQTVKSDEMRSGFLGTDTDRRKLQALVISGAVTALGGALFAPWAQI 241 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 ++PD+ +S++ + +LGG ++ A + + + + Sbjct: 242 VTPDLAHWSQSTKPLLFALLGGTSTFFGPAVGAVLFGFLEYSTRTLVGISDLLTGGLLLA 301 Query: 316 FNMRHTTLMVIALFLVILMRSHS 338 + ++ + + +R Sbjct: 302 VVLAVPGGVLGLIIRLTRIRRSG 324 >gi|319785015|ref|YP_004144491.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170903|gb|ADV14441.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 349 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 61/336 (18%), Positives = 118/336 (35%), Gaps = 19/336 (5%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + +V L+ + + + IL + A +++ G GL+S+ Sbjct: 6 TRTRAGTVTAIIVPLFLVAALALPAVASRGVIQDLFFILTMLTLAQIWNLLAGYGGLVSV 65 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 IGAY+ G + L IP+ A+ + + + + +G Y AI T + Sbjct: 66 GQQAFVGIGAYAMFAGVILLGWNPVLAIPLGALAALVLAVPTAFFAFRLQGAYFAIGTWV 125 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 ++E+ + ++ +WK + G R +R +I Y++ L Sbjct: 126 IAEVTRLLVAQWKALGGGTG--TSLPREATSSILGTDAVRALFGVREAAARDIMAYWLAL 183 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + I WL R+ + A +RDN A S+ + + F +++A G+ GA Sbjct: 184 VLVVAVTGGIYWLLRSRLGLALAAVRDNVDAAQSVGVDTARLRWAVFLIAAAATGLTGAL 243 Query: 249 FAASRDRISPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 RISP VI IV++GG+ ++ + + Sbjct: 244 IFLQTARISPSAAFAVTDWTANVIFIVVIGGIGTIEGPILGVLVFFALRSALADY----- 298 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +V+L L L Sbjct: 299 ----------GSWYLMTLGLIAVVVMLFAPKGLWGL 324 >gi|206564117|ref|YP_002234880.1| putative ABC transporter transmembrane protein [Burkholderia cenocepacia J2315] gi|198040157|emb|CAR56140.1| putative transmembrane component of ABC transporter [Burkholderia cenocepacia J2315] Length = 345 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 99/326 (30%), Gaps = 18/326 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 S F + + V+ + + S+ + + A + V+ Sbjct: 25 SRFFNPAARQKLLAFASLVLLIVFFSFASSNFLEVDNLVSILQATAVNGVLAVACTYVII 84 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + G + L+ A ++ +++G+ + L I + G + G+ K + Sbjct: 85 TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALGFGALSGCVSGIVIAKMKVPP 143 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + G + + R + T +I + Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGNLIPAL 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +L + ++ + L RT + N++A + K++ + S A Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296 G+AG A+ + P + + E + ++VI GG S+ I+ + Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322 M+ + + Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337 >gi|187777546|ref|ZP_02994019.1| hypothetical protein CLOSPO_01137 [Clostridium sporogenes ATCC 15579] gi|187774474|gb|EDU38276.1| hypothetical protein CLOSPO_01137 [Clostridium sporogenes ATCC 15579] Length = 290 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 104/304 (34%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G L +L+ G + + + S + + + L I + Sbjct: 6 LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFVFFTMVSIFKIPLILAIIL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+G G+++ + K +A L+ S +L + G Sbjct: 66 TIVITGLIGVLLYFIAYKPVLKGDTMAPLLSSLGVSIMLEALGQLIWGTE---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + + + ++ L L + ++ ++ I R + N+K Sbjct: 116 -IIPFPINIPKGIYSIASIKLSNIQIFIFLFSITLMIILYKFIMKSNIGLQIRALSYNRK 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F++++ ++G + D + M I + ILGG+ Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL L + + F I L LV++++ + Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280 Query: 339 LLRL 342 + Sbjct: 281 IFGE 284 >gi|153011319|ref|YP_001372533.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] gi|151563207|gb|ABS16704.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] Length = 308 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 95/305 (31%), Gaps = 15/305 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + ++ + A GL+++ G + L++L + Y +GAY + G + ++ Sbjct: 10 LNGIQFGILLFLVAAGLTLIFGVMDLINLAHGVLYMVGAYLTATFTAMTGSFFYGILIAL 69 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + ++ L + L + + K I L Sbjct: 70 PVTLVIGIVLEVLVFRRLYERSHLDQVLATFGLILIVNELVKIIWGAA----------PL 119 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + Y ++ ++ +A + + + T I R N Sbjct: 120 SVPMPDSLSGSIQLFGNLRYPVYRLLIIAAGLATAAGLYVLVNHTRIGMLLRAGATNGDM 179 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L I + F + + G AG + S I+ ++++GG+ Sbjct: 180 VSALGINIRRLFMVVFGLGAMLAGFAGGMISPILSV--DPGMGDSILILTFVVIVIGGVG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336 S+ A + V L +LL + M T L I + V+ R Sbjct: 238 SVRGAFVAAITVGLVDTLGRTFGPMLLRNLLDPAAASQMGRTLVPMLTYILMAAVLYFRP 297 Query: 337 HSLLR 341 L Sbjct: 298 TGLFP 302 >gi|294853022|ref|ZP_06793694.1| branched-chain amino acid transport system permease [Brucella sp. NVSL 07-0026] gi|294818677|gb|EFG35677.1| branched-chain amino acid transport system permease [Brucella sp. NVSL 07-0026] Length = 315 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + LI A +I+ G G S + Y +G Sbjct: 6 ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I ++ L + + + + M++GLP L+ +G Y AIATL + ++ I Sbjct: 66 AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + F Y L + ++ + Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ IR+N++ ++ K+ A +S AF MAGA A + Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ N+ +I + + GG ++ L V ++ Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLSS--------------AY 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 I + + +++ L Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292 >gi|150389845|ref|YP_001319894.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF] gi|149949707|gb|ABR48235.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF] Length = 292 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G S+V + + IGAY + L + Sbjct: 8 LINGLSIGSVYALMAVGYSLVYSIMNFSNFAHGGVIMIGAYFGFYAMTALNLPFIAAFAL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A SG +++ + + L I + I G Sbjct: 68 AAAGSGILAILLERIAYRPLRKR-NAPFLYFIISAMGASIFLENIVIATVGPTFRTYPRV 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + + ++ + +T R +++ Sbjct: 127 FDSAP--------ISFGAISIGRLDITMFIISAISLSILMYIIGKTRTGMGIRATSYSER 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + F + G+AG F + + + GG+ Sbjct: 179 ASALMGVNTDRIIFIVFGLGGVLAGIAGMLFGMKY---TVYPQIGFITMKSFIAAVFGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + +L + + G + + + L LV+++R Sbjct: 236 GSLPGAVIGSVLLGTIETITAGYIS-------------SQYRDLIAFVLLILVLIIRPSG 282 Query: 339 LLR 341 L+ Sbjct: 283 LMG 285 >gi|298294034|ref|YP_003695973.1| inner-membrane translocator [Starkeya novella DSM 506] gi|296930545|gb|ADH91354.1| inner-membrane translocator [Starkeya novella DSM 506] Length = 291 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 97/297 (32%), Gaps = 26/297 (8%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 IY M A G +++ S +++ +GAY+ VIL + +GL+ ++ + ++ + Sbjct: 16 SIYAMVALGFVLLIRSANVVNFAQGEFSMLGAYAMVILLTGFGLNYFVSLGLAVVCMAVF 75 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 G+I + D I +I + +L T G + + L Sbjct: 76 GVIFASITYWPLRDRGQIPVIISTIGATILLSNLILATYGPS-----------PEVLPGL 124 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 F V + ++ L L +T + + +++ L Sbjct: 125 FDGAGFLVGNVFMDSQYLTIIAVTAVLVGLQYLIFEKTMVGKKLQATSQDKEMASLLGIP 184 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 +I FA S+A G+AG A + + I+GG S+ Sbjct: 185 VIAMIFGTFAYSAALGGLAGILVAPILFV--SVGIGPLIALKAFAANIIGGFGSIPGAIC 242 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 I+ V L + F + L V+L+R L R Sbjct: 243 GGLIIGIVETLGATYISVPYKDAFAF-------------LMLLAVLLVRPQGLFGER 286 >gi|298292105|ref|YP_003694044.1| inner-membrane translocator [Starkeya novella DSM 506] gi|296928616|gb|ADH89425.1| inner-membrane translocator [Starkeya novella DSM 506] Length = 305 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 89/306 (29%), Gaps = 16/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL--I 96 + + IY + A G ++V G +G+++ + + A+ +I + + Sbjct: 8 LINGLTLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFMVSAFIALICFLLLTTVLGITSIF 67 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 A++ L S I + + R Sbjct: 68 LALAIVLVVAMFFTSLLSWAIERVAYRPLRGSFRLAPMISAIGMSILLANFVQVSQGPRN 127 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + +I + V +++ L A +++T++ A R + Sbjct: 128 KPIPPMITDVITLMDSGTYQVTLAWKQIIIMVITSALLAGFWYLVQKTSLGRAQRACEQD 187 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +K L + F + +A +AG + ++ F + + +LG Sbjct: 188 RKMAALLGINVDHTISLTFVIGAALAAVAGVMYLMYYG-VANFADGFVPGVKAFTAAVLG 246 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL ++ + + + F L + ++ Sbjct: 247 GIGSLPGAVLGGLLIGLIETFWSAYFSIEYKDVAAFS-------------ILAITLIFMP 293 Query: 337 HSLLRL 342 LL Sbjct: 294 QGLLGR 299 >gi|170746509|ref|YP_001752769.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] gi|170653031|gb|ACB22086.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] Length = 328 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 98/270 (36%), Gaps = 15/270 (5%) Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 S + + +Y G + L I + + G++ G +++ +G Y ++ T Sbjct: 73 SFGHAAYFGMASYLCAYTAKSLGFTPELAILAGTVTAALLGLVFGALAIRRQGIYFSMIT 132 Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186 L ++++ ++ T G+ GI R F + + + MY V Sbjct: 133 LALAQMVFFFSLQA-KFTGGEDGIQAVPR-------------GNLFGAISLADDRVMYAV 178 Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246 + + +I + + + IRDN+ SL KL+ F +S+ G+AG Sbjct: 179 VAVVFMAGMLLIYRIIHSPFGQVLKAIRDNEPRAISLGYRASQYKLAVFVLSATLAGLAG 238 Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 + A S +S + V+ + ++GGM ++ +++ + + Sbjct: 239 STKAIVFQLASLTDVHWSMSGEVVLMTLVGGMGTVFGPIVGALVIVTMETYLAQF-GAWV 297 Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 + + ++ L ++ R Sbjct: 298 TIIQGCVFVLCVLLFREGIVGLIARMIRRP 327 >gi|312113603|ref|YP_004011199.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100] gi|311218732|gb|ADP70100.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100] Length = 304 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 104/312 (33%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90 + + IY + A G ++V G +G+++ + IGA+ + + + L Sbjct: 8 LINGLTLGSIYGLIAIGYTMVYGIVGMINFAHGEVFMIGAFIALIAVLSLFALGVTAVPL 67 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 ++ L + ++ ++G G + + + + +A LI + L + +T G Sbjct: 68 ALLLALVIAMALTGLWGWAIERLAYRPLRNSFRLAPLITAIGMSIALQTFVALTQGARSK 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + +R V +++ + A+ + T++ A Sbjct: 128 PLPP-------VIRGGFTLSEGNGFAVSLSYMQILIIVTTVVVMAAFSYLINSTSLGRAQ 180 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++K + F + +A +AG F A I + F I Sbjct: 181 RACEQDRKMAALCGVNVDRTISLTFVIGAALAAVAGLMFLAYYGVIDFFV-GFVAGIKAF 239 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ SL ++ + G + + F L + Sbjct: 240 TAAVLGGIGSLPGAMLGGLLIGLIEVFWAGYFTAQYKDVAAFS-------------ILAI 286 Query: 331 VILMRSHSLLRL 342 V++ LL Sbjct: 287 VLIFMPSGLLGR 298 >gi|62182062|ref|YP_218479.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168232707|ref|ZP_02657765.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471839|ref|ZP_03077823.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248855|ref|YP_002148486.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|224585354|ref|YP_002639153.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910435|ref|ZP_04654272.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|62129695|gb|AAX67398.1| ABC superfamily (membrane), branched-chain amino acid transporter, high-affinity [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194458203|gb|EDX47042.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197212558|gb|ACH49955.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205333150|gb|EDZ19914.1| high-affinity branched-chain amino acid transport system permease protein livH [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|224469882|gb|ACN47712.1| high-affinity branched-chain amino acid transport system permease protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322716550|gb|EFZ08121.1| branched-chain amino acid transporter permease subunit LivH [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 308 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFIGAIIIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWIVGSSENFAASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|158314959|ref|YP_001507467.1| ABC transporter related [Frankia sp. EAN1pec] gi|158110364|gb|ABW12561.1| ABC transporter related [Frankia sp. EAN1pec] Length = 943 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 116/300 (38%), Gaps = 10/300 (3%) Query: 5 SLRLNKYDKILCL--LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62 RL + I L ++ L+ + L Q + IL Y + ++I+ G Sbjct: 308 PERLRRLWWIRNLERAPLLLLGLIAVILPLVIGQPSRQLLYTVILGYAICGASVTILTGW 367 Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122 G LSL + +GA ++ + + L + + + + + + L Sbjct: 368 AGQLSLGQMAFAGLGA----LIAATLNRGLHLTVGGTTISASPQPFAVAVALAMLVTAVL 423 Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI- 181 A I + + +L+ G A R FL + F R + Sbjct: 424 ATLVGIGALRVRGLLLAVSTFAFGIAAEQYLYRREFLHDEGTTTASFPRASVFGIDIGTQ 483 Query: 182 -FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 YY++L + + +I LRR+ + +RDN A + + KL +FA++ Sbjct: 484 RAYYYLVLVVLVIVMVVIARLRRSGVGRTTIGVRDNSVAAAAYTVGPVRVKLRSFALAGG 543 Query: 241 FIGMAGAFFAASRDRISPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 G+ GA A + + F ++++++S+VI+GG+ S+ + ++G+ + Sbjct: 544 LAGLGGALLAGAVQEVPYTDRYFLSTDSLVLVSVVIIGGVGSVIGPVLGSLWVVGLPAIF 603 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/220 (10%), Positives = 71/220 (32%), Gaps = 8/220 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A G+ +V + +++ +G+ +L RY + W+ + + Sbjct: 9 LFDGAVSGLVIGLLAAGIVLVHRATRVINFAVANMGLVGSALLALLVVRYNVPYWIALVL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G I+ L ++ + L+ + + + + Sbjct: 69 VLAVGALFGAIIDLAVVRRLFTAPRVIVLVATTGVAQLALTIV--------TAYPKLDDY 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ P + +L+ + ++ + L+L RT + + DN + Sbjct: 121 PTSSYPLPWTGTWTPFDDLQITAAQLSILVTVPVVTLLLGLFLSRTVLGRTVQACADNPE 180 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + +AV+ + +A ++ Sbjct: 181 LARLQGISPKTMSTVVWAVAGLLATLCLILISAQNRSLTQ 220 >gi|269960043|ref|ZP_06174420.1| D-ribose transport system permease protein [Vibrio harveyi 1DA3] gi|269835342|gb|EEZ89424.1| D-ribose transport system permease protein [Vibrio harveyi 1DA3] Length = 327 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + + + + + + F Sbjct: 88 LCGAFAASMIALEVPVLIAVPTALFAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|187476993|ref|YP_785017.1| branched-chain amino acid ABC transporter permease [Bordetella avium 197N] gi|115421579|emb|CAJ48089.1| putative branched-chain amino acid ABC transporter, permease protein [Bordetella avium 197N] Length = 290 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 97/304 (31%), Gaps = 26/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + Y + + GL+++ G + +++ +G Y+ +L G ++ + Sbjct: 8 IVNGLLLGGAYAIISIGLTLIFGVVRVVNFAHGEFLMVGMYATYLLAMNLGWHPYVSLAP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A++ G M ++ D + + L+ + G L Sbjct: 68 VALLLFVIGAAMQRFVVQPLLDADGHIQIFATVGVSTALMNLALLVFGADVRATPVELGT 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L+ L+ + ++ RT + A+R + ++ Sbjct: 128 G-----------IISLGSISVVSGQLITLIAALALAGGMHWFMTRTYLGRAFRAVAQHRN 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + AF + SAF+G+A A F IV+LGGM Sbjct: 177 AAALMGVNVRGIYVLAFGIGSAFVGVAAALLTPQYPVFPTIGTYFVLT--AFVIVVLGGM 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + ++ V L + L++++R Sbjct: 235 GSLFGALLGSMLIGLVDSLAGYYI-------------APDLKEVVYFAIFLLILVLRPTG 281 Query: 339 LLRL 342 L L Sbjct: 282 LFGL 285 >gi|33591536|ref|NP_879180.1| branched chain amino acid ABC transporter permease [Bordetella pertussis Tohama I] gi|33603395|ref|NP_890955.1| branched chain amino acid ABC transporter permease [Bordetella bronchiseptica RB50] gi|33571178|emb|CAE40680.1| probable branched-chain amino acid transport system, permease component [Bordetella pertussis Tohama I] gi|33577519|emb|CAE34784.1| probable branched-chain amino acid transport system, permease component [Bordetella bronchiseptica RB50] gi|332380877|gb|AEE65724.1| branched chain amino acid ABC transporter permease [Bordetella pertussis CS] Length = 306 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 96/308 (31%), Gaps = 15/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL++V G + +++L Y GAY R G ++ Sbjct: 10 LLNGLQFGLMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRTGSFTAAVLVA 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ K L + + +L + I + + Sbjct: 70 ALATGLVGAVLELTLIRK----------LAVRDHLAQVLGTYAVILIANDLVKMIWGPAP 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + ++Y + +++ +A + ++ RT R N++ Sbjct: 120 VMLNMPAALSGPVRLLPDLLYPAYRLMIIVFGLAAAAGLYWFVTRTRAGVLVRAGASNRQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + L F + + +AGA I+V+ +++GG+ Sbjct: 180 MATLMGVRVPLLFLGVFVLGAMLAAVAGALLGPV--TAVQIGMGEGILILVLVCIVIGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335 S+ ++ V + + + + + V++ R Sbjct: 238 GSIRGAFVGALLVGMVDTAGRAFLPMLLRQVFPPAVASSVGPTLAAIAIYVLMAGVLVFR 297 Query: 336 SHSLLRLR 343 L R Sbjct: 298 PAGLFPAR 305 >gi|332701495|ref|ZP_08421583.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332551644|gb|EGJ48688.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 305 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 86/304 (28%), Gaps = 13/304 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G ++V G + L++ +A G Y VIL S + Sbjct: 8 FVNGITLGGVYALVALGYTMVYGIIQLINFAHGEFFAAGGYVGVILLSFLAAHGVMDTHP 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + A + MG ++ + +L+ ++ + + + Sbjct: 68 WLGLGIALLLTMGYCAMLAMAVEKIAYKPLRQSSRLAVLLSALGMSIFLQNGLMLTQGVY 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V + +L L ++ + RT I A R ++ Sbjct: 128 DKAYPIGFTAG-GWDFGNVRISLMQVLILGLTAILLVALNALVFRTNIGKAMRATAQDKV 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ +A AG + F I + +LGG+ Sbjct: 187 MSALVGIDSNRIIALTFAIGAALAAAAGILVGLYYGSV-RYDMGFVPGIKAFAAAVLGGV 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +++ I+ V + + I L V+ Sbjct: 246 GNITGAMLGGFIIGMVEIMAAAYIPHG-----------GEYKDVFAFIILIAVLYFMPTG 294 Query: 339 LLRL 342 ++ Sbjct: 295 IMGE 298 >gi|330817552|ref|YP_004361257.1| Branched-chain amino acid ABC-type transport system, permease component [Burkholderia gladioli BSR3] gi|327369945|gb|AEA61301.1| Branched-chain amino acid ABC-type transport system, permease component [Burkholderia gladioli BSR3] Length = 305 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 90/305 (29%), Gaps = 17/305 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+++ G +G++++ IGAY+ + PV + Sbjct: 18 LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTVYLFSWFAQNVWHGFTPVYFFV 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + L + +L W + A + Sbjct: 78 AIVAAFFIAFAAGWLAEWAL--IRHLYRRPLDTLLATWGLSLGMQQVFRSAFGPKEVSPA 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + + +V+ ++ ++L L R+ R N+ + Sbjct: 136 LPDWLMGSWEPAQGLDIPVSGMFVMGLALIMTGGLLLALYRSRWGLRVRATVANRPMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AGA F A + + +V GG SL Sbjct: 196 AGINTRLTDRMTFAIGCGVAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + + L ++ + +++++R L Sbjct: 254 GTVASAFGIAQMQSISEFFLS-------------GSTARVLTLLTVVIILMLRPQGLFAS 300 Query: 343 RTPSN 347 + Sbjct: 301 KVRRA 305 >gi|91976057|ref|YP_568716.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91682513|gb|ABE38815.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 433 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 115/329 (34%), Gaps = 32/329 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L L L + + + I ++FA +I++G G+LS + Y +G Sbjct: 24 IWIATALTLLLLPKIFASGGSLTTFSLVGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83 Query: 79 Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 + ++ G+++ + + L+ + + ++G + G A+ +L ++E+ Sbjct: 84 FLAIHAINLLGGNKWPIPLPLVPLIGGVAGLFFAALIGWVMTQRSGTAFAMISLGLAELV 143 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + + G+AGI + + F+ +I +YY++ + Sbjct: 144 ASSALILRTFFGGEAGIS------------ANRTKLFKLFGLNFGPQIQIYYLVAAWTLI 191 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + L RT + +RDN + + + AF S F G+AGA A + Sbjct: 192 AIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFSGFFAGIAGALAAINF 251 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + + ++ V+ +GG+ + + + + Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTILSLGLSDLTHVW-------- 303 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + V++ + L Sbjct: 304 -------QLYFGLFFIAVVMFTPGGITGL 325 >gi|91212938|ref|YP_542924.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli UTI89] gi|110643697|ref|YP_671427.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli 536] gi|117625729|ref|YP_859052.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli APEC O1] gi|191171577|ref|ZP_03033125.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli F11] gi|218560519|ref|YP_002393432.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli S88] gi|237703196|ref|ZP_04533677.1| high-affinity branched-chain amino acid transport system permease livH [Escherichia sp. 3_2_53FAA] gi|300987353|ref|ZP_07178161.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 200-1] gi|91074512|gb|ABE09393.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli UTI89] gi|110345289|gb|ABG71526.1| high-affinity branched-chain amino acid transport system permease protein LivH [Escherichia coli 536] gi|115514853|gb|ABJ02928.1| high-affinity branched-chain amino acid transport system permease protein LivH [Escherichia coli APEC O1] gi|190908204|gb|EDV67795.1| high-affinity branched-chain amino acid transport system permease protein livH [Escherichia coli F11] gi|218367288|emb|CAR05066.1| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|226902460|gb|EEH88719.1| high-affinity branched-chain amino acid transport system permease livH [Escherichia sp. 3_2_53FAA] gi|294494115|gb|ADE92871.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli IHE3034] gi|300306221|gb|EFJ60741.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 200-1] gi|307628523|gb|ADN72827.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli UM146] gi|315286140|gb|EFU45578.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 110-3] gi|320194042|gb|EFW68675.1| High-affinity branched-chain amino acid transport system permease protein LivH [Escherichia coli WV_060327] gi|323950119|gb|EGB46002.1| branched-chain amino acid transport system/permease component protein [Escherichia coli H252] gi|324014552|gb|EGB83771.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 60-1] Length = 308 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMLGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVVAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|115526206|ref|YP_783117.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115520153|gb|ABJ08137.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 343 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 117/315 (37%), Gaps = 20/315 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R ++ + +FLF + +I +FA L +++G G+ Sbjct: 12 MRRARWHWAELAFWLAAAATIFLFPHRYL-------ILTEIAWLALFALSLDLILGYAGI 64 Query: 66 LSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 +SL + +GAY+ +L L + V+ + G + ++ + Sbjct: 65 VSLGHAAFFGVGAYTAGLLAVHGLVTEPVLALLVAGCAAMVLGFVTSFLVIRGADLTRLM 124 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL ++ + + + ++ IT G G+ LG F +Y + Sbjct: 125 VTLGIALLLRELANRFSNITGGFDGLQGIVMAPVLGL------------FEFDLYGQTGF 172 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 L + F+ + + + + R IR+N ++ + ++ +++++ + G+ Sbjct: 173 IYCLAVLFVLFLLARRVVHSPFGLSLRAIRNNPLRASAIGIPVNRRLVAIYSLAAFYAGV 232 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AGA S S D+F F + ++ ++++GG L I + EL + Sbjct: 233 AGALSTQSTALASLDVFAFDRSADLLLVLVIGGTGYLYGGLIGAVIFKLLQELFSTLTPQ 292 Query: 305 YFNSLLKFDCSFNMR 319 Y+ + + Sbjct: 293 YWQFWIGLVLVIIVL 307 >gi|294084349|ref|YP_003551107.1| inner-membrane translocator [Candidatus Puniceispirillum marinum IMCC1322] gi|292663922|gb|ADE39023.1| inner-membrane translocator [Candidatus Puniceispirillum marinum IMCC1322] Length = 338 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 33/334 (9%), Positives = 93/334 (27%), Gaps = 19/334 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 FL A + + + A G++++ L + A GA +++ Sbjct: 5 FLNPLAILANYILVPGLAYGSQLALGALGVTLIYSVLRFSNFAHGETMAFGAMITIMVTW 64 Query: 87 RYG---------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + L +PV + + + ++ + A + + + Sbjct: 65 WLQSLGVSIAPLPTALLALPVGILGTTILCLTTDRVVYRYYREQKASSVTYLIVSVGVMF 124 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + I + + + + ++ + A++ Sbjct: 125 VTGGLIRFIIGPNDQLFGDGARFIMKARAFKQMTGLNEGLAIKTSQGVTVITAVIVVAAV 184 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L RT + R DN+ + A+ +++A +AG + + Sbjct: 185 FWFLNRTRTGKSMRAFSDNEDLALLSGINPDRVVMIAWIITAALATIAGTLYGLDKSF-- 242 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK------ 311 + + + I+GG+ S ++ + +L Sbjct: 243 KPFVYLQLLLPIFAAAIVGGVGSPVGAIAGGFVIAFSELIITFAYKRVVTYMLPESMAPE 302 Query: 312 --FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L +V+L++ + + Sbjct: 303 GLVQFLSTDYKFAVSFVILVIVLLVKPTGIFSGK 336 >gi|124024660|ref|YP_001018967.1| branched-chain amino acid ABC transporter permease [Prochlorococcus marinus str. MIT 9303] gi|123964946|gb|ABM79702.1| putative membrane protein of urea ABC transport system [Prochlorococcus marinus str. MIT 9303] Length = 375 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 107/356 (30%), Gaps = 55/356 (15%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L+ V ++ + + ++ + L + A G+ ++ G GLLSL I + Sbjct: 10 WPLVIVWVLIIAAIVAAPAVVSVFGLNLLGRFLSLSIVALGIDLIWGFTGLLSLGQGIFF 69 Query: 75 AIGAYSYVIL---------------------------GSRYGLSIWLLIPVSAMISGACG 107 A+G Y+ + + S W + +I Sbjct: 70 ALGGYAAAMYLQLNSSSEQPNGIPEFFGLYGVDQLPGFWQPFHSPWFTLIAIWLIPALLA 129 Query: 108 MIMGLPSLKFRGD--YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 ++G + R Y +I T +F N + + NG G+ Sbjct: 130 ALLGNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLK------------TD 177 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 + F + +++ M L+ + W+ R IRD++ Sbjct: 178 VTELFGQQVGSAFMQRGFFWLTAVMVILAWLAVRWVVRGRFGEVLIAIRDDEPRLRFAGY 237 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 K FA++ G+ GA + +SP +I ++ V +GG +L Sbjct: 238 NPTLFKTIVFAMAGGLAGIGGALYTVQSGIVSPQYMTVPFSIDMVIWVAVGGRGTLIGAI 297 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + + ++ LV+ ++ Sbjct: 298 LGALVINLARS--------------QISTVWPEGWLFILGGLFILVVTALPEGVVG 339 >gi|33864491|ref|NP_896051.1| putative membrane protein of ABC transport system [Prochlorococcus marinus str. MIT 9313] gi|33641271|emb|CAE22401.1| Putative membrane protein of ABC transport system [Prochlorococcus marinus str. MIT 9313] Length = 375 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 107/356 (30%), Gaps = 55/356 (15%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L+ V ++ + + ++ + L + A G+ ++ G GLLSL I + Sbjct: 10 WPLVIVWVLIIAAIVAAPAVVSVFGLNLLGRFLSLSIVALGIDLIWGFTGLLSLGQGIFF 69 Query: 75 AIGAYSYVIL---------------------------GSRYGLSIWLLIPVSAMISGACG 107 A+G Y+ + + S W + +I Sbjct: 70 ALGGYAAAMYLQLNSSSEQPNGIPEFFGLYGVDQLPGFWQPFHSPWFTLIAIWLIPALLA 129 Query: 108 MIMGLPSLKFRGD--YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165 ++G + R Y +I T +F N + + NG G+ Sbjct: 130 ALLGNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLK------------TD 177 Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 + F + +++ M L+ + W+ R IRD++ Sbjct: 178 VTELFGQQVGSAFMQRGFFWLTAVMVILAWLAVRWVVRGRFGEVLIAIRDDEPRLRFAGY 237 Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285 K FA++ G+ GA + +SP +I ++ V +GG +L Sbjct: 238 NPTLFKTIVFAMAGGLAGIGGALYTVQSGIVSPQYMTVPFSIDMVIWVAVGGRGTLIGAI 297 Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ + + ++ LV+ ++ Sbjct: 298 LGALVINLARS--------------QISTVWPEGWLFILGGLFILVVTALPEGVVG 339 >gi|99081116|ref|YP_613270.1| inner-membrane translocator [Ruegeria sp. TM1040] gi|99037396|gb|ABF64008.1| inner-membrane translocator [Ruegeria sp. TM1040] Length = 336 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 34/334 (10%), Positives = 89/334 (26%), Gaps = 19/334 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 FL S + + A G++++ G L + A G ++ Sbjct: 3 FLNAFVALSNFVLIPGIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVVILFTW 62 Query: 87 RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + L +P+ +++ +I KF + A + + + Sbjct: 63 LFQSWGISAGPLPTALLALPIGIVMTMGLVLITDKAVFKFYREQKAKPVVFVMVSLGVMF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + + + ++ + A + Sbjct: 123 MMNGLVRFIIGPGDQRFGDGERFIIKARTFKQMTGLDEGLAIKTSQGITVVTAIVVVALL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L +T + R DN+ + + + +A +AG + + Sbjct: 183 FWFLNKTRTGKSMRAYSDNEDLALLSGINPERVVMITWIIVAALATIAGTLYGLDKSF-- 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF- 316 F + + + I+GG+ S ++ + LL Sbjct: 241 KPFTYFQLLLPIFAAAIVGGLGSPLGAIAGGFVIAMSEVMITYAWKKVGGYLLPESLEPE 300 Query: 317 -------NMRHTTLMVIALFLVILMRSHSLLRLR 343 + L +V+L + + + + Sbjct: 301 GLAQLLSTDYKFAVSFAILVVVLLFKPTGIFKGK 334 >gi|323126672|gb|ADX23969.1| branched-chain amino acid transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 284 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 105/303 (34%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I +Y + A G ++V G + L++ Y +GA+ L + L+ +L + + Sbjct: 5 LVNGLILGSVYALLALGYTMVYGIIELINFAHGDLYMMGAFIGYYLINALQLNFFLALIL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G+++ + + IA LI + +L G L Sbjct: 65 TMVFTACLGVLIEFLAYRPLRQSTRIAALITAIGVSFLLEYGMVYFVGAEARAFPQALKV 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +LL L ++ +++T + A R + + Sbjct: 125 VKYH-----------LGPISVTNVQLIILLVSLTLMLALQFIVKQTKMGKAMRAVSVDSD 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FA+ SA G AG + I+P M + + +LGG+ Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGLKAFVAAVLGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + A I+ + + ++ + L +++L+R Sbjct: 233 GIIPGAAFGGFIIGLLET-------------FSTAIGLSSYRDAVVYVVLIMILLVRPAG 279 Query: 339 LLR 341 LL Sbjct: 280 LLG 282 >gi|326318478|ref|YP_004236150.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375314|gb|ADX47583.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 297 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 96/304 (31%), Gaps = 16/304 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I ++ A GL I G++G++++ +GAY+ V+ G + IP++ Sbjct: 9 LSVGAILLLVALGLVITYGAMGVINMAHGEMIMVGAYTAVLAQIWLGWGLIASIPLAFAS 68 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + G+++ ++ LA L + + + L Sbjct: 69 AALLGLLIERCVVRKLYGRLADTLLATWGVAILVQQAVRLEGGLSFFGIHVQGLGPGLQN 128 Query: 163 VRSLIRFFR-FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + V + +++ L+ L RT + R I N + Sbjct: 129 LPVPEMLQGVVQVGGVAINAYRAFIVASTAVLTLGTWFLLYRTTVGMQVRAIIRNPRMAA 188 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 + + FA + G+AG A + + + +V+ GG+ SL Sbjct: 189 ACGIDVQRVNAWTFAFGAGLAGVAGVLVAGFKTV--SPDMGTTLVVDGFLVVVAGGLGSL 246 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 +L V + ++ + F + L+I++R L Sbjct: 247 LGAVVTAVVLGEVNGVIATLSNDIVGRAVVFG-------------LVILLIVVRPQGLFS 293 Query: 342 LRTP 345 + Sbjct: 294 FKGR 297 >gi|256112105|ref|ZP_05453041.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella melitensis bv. 3 str. Ether] gi|265993544|ref|ZP_06106101.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|262764414|gb|EEZ10446.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] Length = 315 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + LI A +I+ G G S + Y +G Sbjct: 6 ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGVG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I ++ L + + + + M++GLP L+ +G Y AIATL + ++ I Sbjct: 66 AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + F Y L + ++ + Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ IR+N++ ++ K+ A +S AF MAGA A + Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ N+ +I + + GG ++ L V ++ Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 I + + +++ L Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292 >gi|297566726|ref|YP_003685698.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] gi|296851175|gb|ADH64190.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] Length = 300 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 106/307 (34%), Gaps = 14/307 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + IY + A GL++ VG +G+++ IGA+ + +R+GL L + + Sbjct: 8 LINGVLAAGIYALVASGLALAVGVVGIVNFAHGEFLMIGAFVSYWMFTRFGLDPLLSLGI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A++ G ++ + ++++ L + G V+ Sbjct: 68 AALVVFLVGAASYYGLIRPVLAAPELNQMLLTFGLSVALQNVALVVFGAQTRVVSPP--- 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + + + L + + +L RT + A R + N+ Sbjct: 125 --------YQGSTISLAGLSFGVPQFAAFLLSLGILGGLYGFLGRTRMGFAVRAVAQNRI 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L L AF +S+A G+AG + F+ + +IV++ G+ Sbjct: 177 APGLLGIEKEQVYLLAFGLSAAIAGVAGVMLSVLLYA--SPTVGFAYTLKAFAIVVMAGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L + A +L + T LV+ + Sbjct: 235 GNLRGVIPAAMVLALAEAFVSTYLPGGGGWVEAVFFLVIFVALTWRSWQDVLVMRWK-RG 293 Query: 339 LLRLRTP 345 L + P Sbjct: 294 LAGRKAP 300 >gi|218296530|ref|ZP_03497258.1| inner-membrane translocator [Thermus aquaticus Y51MC23] gi|218243072|gb|EED09604.1| inner-membrane translocator [Thermus aquaticus Y51MC23] Length = 198 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 2/180 (1%) Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + + F + F YYV L + A L RT A +RDN +A Sbjct: 1 MDMPRASLFGYEAGFRNHFHFWYYVSLATLVVLALFWRNLLRTRYGRALIAVRDNDRAAD 60 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 ++ KL AFA+ + + G+AG +A + + + F+ ++ +++ I+GG+ +L Sbjct: 61 AMGMDPGRTKLFAFALGAFYAGVAGVLYAYLSRAVVIEDYVFAHSVKYLAMAIVGGLGTL 120 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDC--SFNMRHTTLMVIALFLVILMRSHSL 339 T L+ + ++ + + + + + L ++ L Sbjct: 121 VGSFLGTGFLVLLDVNMEALSNFIKGLGFSVAGVDVASALRPLVFGLVILLFLMFEPRGL 180 >gi|163746372|ref|ZP_02153730.1| branched-chain amino acid ABC transporter, permease protein, putative [Oceanibulbus indolifex HEL-45] gi|161380257|gb|EDQ04668.1| branched-chain amino acid ABC transporter, permease protein, putative [Oceanibulbus indolifex HEL-45] Length = 336 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 33/334 (9%), Positives = 88/334 (26%), Gaps = 19/334 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 L S + + A G+++V G L + A+G + +++ Sbjct: 3 LLNAFIALSNYVLIPGIAYGSQLALGALGVTLVYGILRFSNFAHGDTMAMGTMATILVTW 62 Query: 87 RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + L +P + + KF + A +++ Sbjct: 63 LFQSMGLSLGFLPTALLALPFGIAFAILLLLGTDKVVYKFYREQKAKPVILVIVSLGVTF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + ++ ++ + A + Sbjct: 123 IYNGITRFIIGADDQNFLDGQRFIMSARDFKQMTGLDEGLAFKTTQGITIVTAIIVVALL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L +T + R DN+ + + + +A +AG + + Sbjct: 183 FWFLNKTRAGKSMRAYSDNEDLALLSGINPERVVMITWMIVAALATIAGTLYGLDKSF-- 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309 F + + + I+GG+ S ++ + + Sbjct: 241 KPFTYFQLLLPIFAAAIVGGLGSPVGAIAGGFVIAFSEVTITYAWKKVLGYVMPEGMEPD 300 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L +V+L++ L + + Sbjct: 301 GLVQLMSTDYKFAVSFVILLIVLLIKPTGLFKGK 334 >gi|153833296|ref|ZP_01985963.1| ribose transport system permease protein RbsC [Vibrio harveyi HY01] gi|156977358|ref|YP_001448264.1| ribose ABC transporter permease protein [Vibrio harveyi ATCC BAA-1116] gi|148870432|gb|EDL69353.1| ribose transport system permease protein RbsC [Vibrio harveyi HY01] gi|156528952|gb|ABU74037.1| hypothetical protein VIBHAR_06144 [Vibrio harveyi ATCC BAA-1116] Length = 327 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + + + + + + F Sbjct: 88 LCGAFAASMIALEVPVLIAVPTALFAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|317046496|ref|YP_004114144.1| inner-membrane translocator [Pantoea sp. At-9b] gi|316948113|gb|ADU67588.1| inner-membrane translocator [Pantoea sp. At-9b] Length = 308 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTTWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 +I+ + I I + R Sbjct: 72 MIAAGFVMAIIISSAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ +++R + + A R ++ Sbjct: 132 ALPSLITGQWTLGESNGFAATLSTMQLMIWVVTFIAMLALTVFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +AG I+ F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSIN-PFIGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|148557964|ref|YP_001257383.1| branched-chain amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|148369249|gb|ABQ62121.1| branched-chain amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 294 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 18 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L A + + +I + G + Sbjct: 78 LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + A R + ++ A + + Sbjct: 127 LRTPIEIGPLCVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + + + ++ L+++++ L Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285 >gi|91224729|ref|ZP_01259989.1| ribose ABC transporter permease protein [Vibrio alginolyticus 12G01] gi|91190275|gb|EAS76544.1| ribose ABC transporter permease protein [Vibrio alginolyticus 12G01] Length = 327 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + + + + + + F Sbjct: 88 LCGAFAASMIALEVPVLVAVPTALVAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTEGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|325675319|ref|ZP_08155003.1| inner-membrane translocator [Rhodococcus equi ATCC 33707] gi|325553290|gb|EGD22968.1| inner-membrane translocator [Rhodococcus equi ATCC 33707] Length = 766 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 110/286 (38%), Gaps = 10/286 (3%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +A LL+ +++ + + + + + A L+++ G G ++L V AI Sbjct: 313 AVAWGAALLVIVYMIRLLMVESAITTLTLGMSFAIIALSLTLLTGYAGEMNLAVVSFGAI 372 Query: 77 GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 G+ + + +++ G ++ LP+L+ RG YLA+AT+ Sbjct: 373 STIVAYHFGTSGSGLATRLTLWGLIIGTLVAAVIGGLVALPALRLRGLYLALATMAFGVF 432 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 N++++ + + L T I + + + + + Sbjct: 433 LSNMVLR------DTTEHELFGVKFSLFTGGSLSIPPLKVGPLDLSNQTAFLMTVTAIFT 486 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + A ++ LR + ++D+ A L ++ KLS F +S+ G+ G +++ Sbjct: 487 ILAIGVVALRNSGYGRRLAAMKDSPAAAAMLGQNLVKLKLSVFMLSAGIAGLGGILMSSA 546 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 +S + F ++ V+ + ++ G+ ++ + + Sbjct: 547 IGAVSNENFSIMISLTVLMLTVVAGIGYVTGALFGGLLAGVGFAVI 592 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 84/292 (28%), Gaps = 8/292 (2%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + +Y + A GL + + G+ + +GA+ Y + L L + Sbjct: 6 TFTILGLVLGSVYAIAASGLVLTYNTSGIFNFAHGAQAMLGAFLYWQFRYGWDLPTPLAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ ++G P + L + L + I++ + G + + Sbjct: 66 LLTIGVAG--------PLMGLLLYALIMRGLRDTAEVTKIVVTVSILLGGVSLSHWFWHP 117 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 T RF + L+ ++ + RT + + R + D+ Sbjct: 118 EEPRTVKMFFGDESRFSFFGATVHMHEVICLVAAVLIAVGLRFLFTRTRLGVSMRGVVDD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++A+ S +AG I + + G Sbjct: 178 PDLLRLNGHNPERIAAFSWALGSTLAVVAGILITPISGGTLEANLLTLLVIDAFAAAMFG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 + S+ + +L G + S M +++I L Sbjct: 238 RLRSIPRTFVGAIVLGLAGTYVLGYFPSEWTWTSNLRVSLPMIALFVVLIVL 289 >gi|259416265|ref|ZP_05740185.1| inner-membrane translocator [Silicibacter sp. TrichCH4B] gi|259347704|gb|EEW59481.1| inner-membrane translocator [Silicibacter sp. TrichCH4B] Length = 336 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 33/334 (9%), Positives = 89/334 (26%), Gaps = 19/334 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 FL S + + A G++++ G L + A G ++ Sbjct: 3 FLNAFVALSNFVLIPGIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVVILFTW 62 Query: 87 RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + L +P+ + + A ++ KF + A + + + Sbjct: 63 LFQSWGISAGPLPTALLALPIGIVATMALVLVTDKAVFKFYREQKAKPVVFVMVSLGVMF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + + + + ++ + A + Sbjct: 123 MMNGLVRFIIGPGDQRFADGERFIIKAGTFKKMTGLDEGLAIKTSQGITVVTAIIVVALL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L +T + R DN+ + + + +A +AG + + Sbjct: 183 FWFLNKTRTGKSMRAYSDNEDLALLSGINPERVVMITWLIVAALATIAGTLYGLDKSF-- 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF- 316 F + + + I+GG+ S ++ + +L Sbjct: 241 KPFTYFQLLLPIFAAAIVGGLGSPLGAIAGGFVIAMSEVMITYAWKKVGGYILPESLEPE 300 Query: 317 -------NMRHTTLMVIALFLVILMRSHSLLRLR 343 + L +V+L + + + + Sbjct: 301 GLAQLLSTDYKFAVSFAILVVVLLFKPTGIFKGK 334 >gi|217967322|ref|YP_002352828.1| inner-membrane translocator [Dictyoglomus turgidum DSM 6724] gi|217336421|gb|ACK42214.1| inner-membrane translocator [Dictyoglomus turgidum DSM 6724] Length = 293 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 89/289 (30%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + IY + A G ++V G L L++ Y +GA+ + + + V Sbjct: 9 IINGISLGSIYALIALGYTMVYGILRLINFAHGDIYMLGAFIGFFALGSWNMPFAFGLIV 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ G+++ + K + I+ LI + L + G Sbjct: 69 AMLLTAVIGILVEKLAYKPLRNAPRISLLITAIGVSFFLENIMVLLVGAT---------- 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + +I +L L + + +T I A R + +++ Sbjct: 119 -PRAFPQKIPTEIYFIGELIITNKQIIILSVSILLMLFLQFIVNKTKIGRAMRAVSQDKE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L I FA+ SA G ++I P M + +LGG+ Sbjct: 178 MAQMLGVNIDNVISFTFALGSALAAAGGVLVGMYFNKIEPYM-GVMPGLKAFVAAVLGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + I+ L G + F + I Sbjct: 237 GIIPGAMLGGFIMGIAEVLVSGFISSTIRDAVAFVILIIILLIKPTGIL 285 >gi|254439478|ref|ZP_05052972.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] gi|198254924|gb|EDY79238.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] Length = 335 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 95/314 (30%), Gaps = 17/314 (5%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 S Y +++ A GL IV G G+LS + + Y+Y ++ G + Sbjct: 22 PAFSDPYTIGNAAYFMVWTFMAMGLGIVWGYCGVLSFGQTAFFGLAGYAYGVVSINLGAA 81 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 L + G L + + + + ++++ Sbjct: 82 FGLTWLALVLSVTIGGAFALLIGYFMFYGRIKGVFIGIVTLSVTLVLETFMAQTAGPNWR 141 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSASIILWLRRTAISN 208 + D + + I +Y+VLL M + + L N Sbjct: 142 IGDARLNGFNGMSGMPPLTVPWPGGDIVLYSGTALYFVLLVMVVVCYLGLRMLLNAPFGN 201 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 IR+N + L I + AF + A ++G + A I+P + + Sbjct: 202 VLVAIRENPERAEMLGYDIRLYQTLAFGLGGALAALSGTLYTAWGQYITPSSMGLTAAAL 261 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 I V +GG ++ + ++I + + +M L Sbjct: 262 PIVWVAVGGRRDITATLLGSILVIAGFQTLTIYG--------------SQYALIVMGALL 307 Query: 329 FLVILMRSHSLLRL 342 +L+ L+ Sbjct: 308 VFTVLVTPDGLIST 321 >gi|170742872|ref|YP_001771527.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168197146|gb|ACA19093.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 291 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 90/305 (29%), Gaps = 20/305 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G +++ G G+L+L+ A S YGL + Sbjct: 7 LIDGFAISALYALGATGFTLIFGVSGVLNLSHGALMVTAAVVAWAASSEYGLGAYAGAAT 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +K + + + I I + G L+ Sbjct: 67 GVAVCTLLTLATYGVVVKP-----IDRSKAIPAEEKEIFILTGTLLWGIMIQEFIAYLFT 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + V + L A + + + RT N + Sbjct: 122 SNAKTVMPIVEGVVTIAGVRTPWNQIFTALVCWGTIALLWVLVNRTRTGKVVLAASMNPR 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + ++ +A+ G+AG S + + SIV+LGG+ Sbjct: 182 GVTLLGFELSKIYVAIWAIYGVLAGIAGVLLGQFLGVSSYSVGPLT--ASAFSIVVLGGL 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+S A ++ + + + T ++ L V+ +R Sbjct: 240 GSVSGSLIAAYVVGYLETITAYLIS-------------PAYRTIPALLLLVAVMYVRPQG 286 Query: 339 LLRLR 343 LL R Sbjct: 287 LLGRR 291 >gi|326796935|ref|YP_004314755.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326547699|gb|ADZ92919.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 334 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 110/301 (36%), Gaps = 19/301 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V +++ L L + I ++IY++ A +++ G GL+S+ + +GAY Sbjct: 22 VAALIVVCLALLPFYADGQIIDKVTMLMIYIVLAMMWNLLAGFAGLVSVGQQAFFGLGAY 81 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + I ++ + + ++ ++ L +G AIA +++E+ + ++ Sbjct: 82 -FAIRLVMADMNPYGAFIIGSLAVAVIAYLISFFVLNLKGGEFAIAMWVIAEVIRIFVMF 140 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 I + ++ L + + + +L Sbjct: 141 DPIIQG-----------------ETGTSLLAMNAYEPELRRSLNFWFSLSVFVVFSGGVL 183 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF-AASRDRISP 258 L ++ + A + IRD+++A S+ + K F +++ AG + + + Sbjct: 184 VLLKSRLGAAAQAIRDDEEAARSVGIKVESTKRIIFVIAAVGCAFAGCIWLSTAITFQPR 243 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 F + ++ +V++GG+ + + + E+ +Y L F + Sbjct: 244 TNFGVQWTVFMLFMVLVGGLGTFEGPIIGAILFFILQEVFGDFGAWYLAGLGAVAVLFAL 303 Query: 319 R 319 Sbjct: 304 Y 304 >gi|256059392|ref|ZP_05449594.1| branched-chain amino acid ABC transporter, permease protein [Brucella neotomae 5K33] gi|261323353|ref|ZP_05962550.1| branched-chain amino acid ABC transporter [Brucella neotomae 5K33] gi|261299333|gb|EEY02830.1| branched-chain amino acid ABC transporter [Brucella neotomae 5K33] Length = 294 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 90/294 (30%), Gaps = 27/294 (9%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 18 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L A + + +I + G + Sbjct: 78 LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + A R ++ A + + Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAAAQHRSAAELMGVNV 186 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + + + ++ L+++++ L Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285 >gi|17988445|ref|NP_541078.1| high-affinity branched-chain amino acid transport system permease protein LIVM [Brucella melitensis bv. 1 str. 16M] gi|225686936|ref|YP_002734908.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella melitensis ATCC 23457] gi|256015954|ref|YP_003105963.1| high-affinity branched-chain amino acid transport system permease protein [Brucella microti CCM 4915] gi|256042922|ref|ZP_05445868.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella melitensis bv. 1 str. Rev.1] gi|256059752|ref|ZP_05449947.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella neotomae 5K33] gi|256261925|ref|ZP_05464457.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2 str. 63/9] gi|260564157|ref|ZP_05834642.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1 str. 16M] gi|261323730|ref|ZP_05962927.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|265989356|ref|ZP_06101913.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|306841192|ref|ZP_07473908.1| branched-chain amino acid transport system permease [Brucella sp. BO2] gi|306845351|ref|ZP_07477926.1| branched-chain amino acid transport system permease [Brucella sp. BO1] gi|17984230|gb|AAL53342.1| high-affinity branched-chain amino acid transport system permease protein livm [Brucella melitensis bv. 1 str. 16M] gi|225643041|gb|ACO02954.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella melitensis ATCC 23457] gi|255998614|gb|ACU50301.1| high-affinity branched-chain amino acid transport system permease protein [Brucella microti CCM 4915] gi|260151800|gb|EEW86893.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1 str. 16M] gi|261299710|gb|EEY03207.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|263000025|gb|EEZ12715.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263091404|gb|EEZ15940.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2 str. 63/9] gi|306274267|gb|EFM56079.1| branched-chain amino acid transport system permease [Brucella sp. BO1] gi|306288818|gb|EFM60136.1| branched-chain amino acid transport system permease [Brucella sp. BO2] gi|326411365|gb|ADZ68429.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella melitensis M28] gi|326554655|gb|ADZ89294.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella melitensis M5-90] Length = 315 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + LI A +I+ G G S + Y +G Sbjct: 6 ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I ++ L + + + + M++GLP L+ +G Y AIATL + ++ I Sbjct: 66 AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + F Y L + ++ + Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ IR+N++ ++ K+ A +S AF MAGA A + Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ N+ +I + + GG ++ L V ++ Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 I + + +++ L Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292 >gi|15805312|ref|NP_294004.1| branched-chain amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6457953|gb|AAF09863.1|AE001889_9 branched-chain amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 285 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 93/304 (30%), Gaps = 28/304 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A GL++V G + + + Y +GAY S GL + + Sbjct: 8 LFNALALGGVYALVALGLTLVYGVMKIPNFAHGGLYMLGAYLSYAGISSLGLGYVPALLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 SA++ +M + + +I + L + G VA+ + Sbjct: 68 SAVVVALLAALMERVIFFPLRNAPHVQPMIAALGVLFFLEAGVQLIWGADFKQVAEPIP- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V VL+ + +LRRT + N++ Sbjct: 127 -----------GILNIGGVTITWQRLIVLVASVVAMLGLNFFLRRTLTGATIEAMAQNRE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+S A + + A N+ V +I+ILGGM Sbjct: 176 GARLVGINTGRVGMLTFAISGALAAIGASLIAPIVSV--TPAMGEIMNLKVFAIIILGGM 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L +N + L +V+ +R Sbjct: 234 GSIPGAIVGAFLLAFAEVFGGYINL--------------DFAEVIGFAVLVVVLAIRPQG 279 Query: 339 LLRL 342 L R Sbjct: 280 LFRR 283 >gi|317121419|ref|YP_004101422.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter marianensis DSM 12885] gi|315591399|gb|ADU50695.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter marianensis DSM 12885] Length = 299 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 16/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L +++ +A+GAY + L Sbjct: 6 VVNGLTVGSIYALVALGYTMVFGVLKMINFAHGDLFALGAYLGLTFLIWGALGQGAGGLA 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G + + + ++ ++ + F Sbjct: 66 ALLLIGLLAALCVGLAGVLVERVAYRPLRGAGRL--PAVVSALGVSVFIQNGIMLLWGAF 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + + + +L G L ++ L+++ T + A R I + + Sbjct: 124 PVAFPHGMVPDVSWSVGGITISLMRLVILGGSLVLMLALYLFIQYTKLGAAMRAIAVDHE 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + +A G+AG +++ M + + + ILGG+ Sbjct: 184 TARLMGIDVDRLIQLVFLLGAALGGLAGVMVGLYYGQLNFTM-GWLYGLKAFTAAILGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L L G + + F L L++L+R Sbjct: 243 GNIPGAMVGGLVLGLAETLAAGYVAGEWKDAVAF-------------FILILILLVRPTG 289 Query: 339 LLRLR 343 LL R Sbjct: 290 LLGER 294 >gi|300907398|ref|ZP_07125045.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 84-1] gi|300400813|gb|EFJ84351.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 84-1] Length = 297 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 1 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 60 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 61 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 117 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 118 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTVFIRYSRMGRAC 173 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 174 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 232 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 233 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 279 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 280 VLLVMPTGILGR 291 >gi|289450392|ref|YP_003475426.1| putative high-affinity branched-chain amino acid ABC transporter permease LivH [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184939|gb|ADC91364.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 291 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 101/305 (33%), Gaps = 24/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + Y + A G S+V G L L++ + YA GA + + L + + ++ Sbjct: 6 IFNGLTLGMTYALIAVGYSLVFGILRLVNFSHGSVYAFGANAILFLLATNIGIVPAILIG 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + ++ R A +++ I + +I I + L+ Sbjct: 66 TLITGILGVIVDKTSLEPLRKRKAANIASLITTIGISGIITNLLIAFAGSQKKPFPVLFP 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + Y+ L ++ + T I A R N K Sbjct: 126 TEY----------LTAGGIQVTYVQLYMFCISLALMLLLVGVVHFTRIGLAMRACEQNIK 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F F + +AGA ++ + P+M ++ + S +LGG+ Sbjct: 176 AAGLMGINVNFVISFTFFLGGVSAAIAGALVSSYYGMVYPNM-GYTAGLKAFSAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL I+ + F + F I L +V++++ + Sbjct: 235 GSLPGSLLGGLIVGVSESVAATALGSEFRDSMAF-------------IILIVVLVIKPNG 281 Query: 339 LLRLR 343 + Sbjct: 282 FFGRK 286 >gi|115359193|ref|YP_776331.1| inner-membrane translocator [Burkholderia ambifaria AMMD] gi|115284481|gb|ABI89997.1| monosaccharide ABC transporter membrane protein, CUT2 family [Burkholderia ambifaria AMMD] Length = 345 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 97/326 (29%), Gaps = 18/326 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + F + + V+ + S+ + + A + V+ Sbjct: 25 ARFFNPAARQKLLAFASLVLLIAFFSFASPNFLDVDNLVSILQATAVNGVLAVACTYVII 84 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + G + L+ A ++ +++G+ + L I + G + G K + Sbjct: 85 TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALGFGALSGSVSGFVIAKMKVPP 143 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + G + + R + T +I + Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGSLIPAL 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +L + ++ + L RT + N++A + K++ + S A Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296 G+AG A+ + P + + E + ++VI GG S+ I+ + Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322 M+ + + Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337 >gi|330879669|gb|EGH13818.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 305 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 17/303 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + ++ A GL+I+ G +G++++ +GAY+ +L + + + P Sbjct: 17 NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTYVLSTLVQTYMPSMQPYYF 76 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + A ++ + + + +L W + + + Sbjct: 77 FFAIALSFVVAGSIGWVVER--VMISRLYHRPLDTLLATWGLSLVMQQALRSIFGAREVS 134 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + S + +V+ L+ I L L RT R N+ Sbjct: 135 ANPPEWLMGAVSLSDTIEIPRNGLFVMALTVLLTGGIFLMLYRTRWGLHVRATVQNRVMS 194 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ FA+ G+AGA A + + + +V+ GG S Sbjct: 195 RAVGINTREVDRMTFALGCGVAGVAGA--AFTTIGSTGPTAGSLYIVDTFLVVVFGGAQS 252 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + + + +L A+ L++LMR L Sbjct: 253 LLGTIASAFTIAQTQSISEFFMSGSMAKVLTLS-------------AVILILLMRPQGLF 299 Query: 341 RLR 343 + Sbjct: 300 SSK 302 >gi|326402538|ref|YP_004282619.1| branched-chain amino acid ABC transporter permease [Acidiphilium multivorum AIU301] gi|325049399|dbj|BAJ79737.1| branched-chain amino acid ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 300 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 93/305 (30%), Gaps = 17/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + L++ +GA+ + + G + + Sbjct: 8 VFNGLTVGGIYALIALGYTMVYGVMRLINFAHGDLCILGAFIGLTFLTSLGGAGHPGAAL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + A +++ + + + + + + ++ Sbjct: 68 LILAFVAAIVVVAVAGVVLELAAYRPLRKADRLAAVVSALGASLLIENGIMLIWSPQVSV 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +++ L A++ L++ T A R +Q Sbjct: 128 FPSGLLPTTTYH---IAGASISFVQVMIIIVSFLLMAALYLFVNHTRFGTAIRAAAIDQD 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + S F + A + G F + M ++ + ILGG+ Sbjct: 185 AARLMGINVNRVIASVFIIGPALGAVGGLFIGVYYREVYFTM-GWTYGLYAFIAAILGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L G + + F L ++L+R Sbjct: 244 GNIPGAMLGGILLGLFNAFAAGYISSSWQDAITF-------------ALLIGILLVRPSG 290 Query: 339 LLRLR 343 LL R Sbjct: 291 LLGER 295 >gi|302024223|ref|ZP_07249434.1| branched-chain amino acid transport system permease protein [Streptococcus suis 05HAS68] Length = 253 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 41/277 (14%) Query: 72 IAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 AIGA++YV + I + V +ISGA +++G+P+L+ +GDYLAIATL ++ Sbjct: 7 AFCAIGAHAYVPMENDANLWWICYRLIVGMLISGAVALLVGIPTLRLKGDYLAIATLGVA 66 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 EI + ++I +TNG AGI ++ Sbjct: 67 EIIRILIINGGSVTNGAAGIMSIPLFTSWP-------------------------LVYIF 101 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 ++ + + R+ + A ++R+++ A S+ F K+SAF + +AG A Sbjct: 102 VIITTLVTVNFLRSPMGRATISVREDEIAAESVGVNPTFVKVSAFVFGAMTAAIAGGLHA 161 Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 I P F F ++ V+ I++LGG+ S++ A +L + Sbjct: 162 GYVGTIVPKDFAFMTSVNVLIIIVLGGLGSITGTFVAAIVLGILNVFLKSY--------- 212 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + +AL L+++ R LL + S Sbjct: 213 ------SDISMIIYSLALILLMIFRPGGLLGTKEFSV 243 >gi|149915788|ref|ZP_01904313.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter sp. AzwK-3b] gi|149810370|gb|EDM70215.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter sp. AzwK-3b] Length = 398 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 105/367 (28%), Gaps = 36/367 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + L + +L G + + L + A + +V G G+LSL Sbjct: 25 WFLGALGLFTLSVSVLAEGFGLPILSTSMVKVLGMTLCLCLIAVAMDVVWGYCGILSLGH 84 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPV-----------------SAMISGACGMIMGLP 113 + +G Y+ + ++ + + + Sbjct: 85 FAFFGLGGYAIGMWLMYARTEGIVIDSFENAPIPPTETEITDAIATQIFGVVGSNELPAL 144 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR-- 171 + L +A +++ ++ W + G+Y++ + + + Sbjct: 145 WVFAHSLPLQLAMVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDTG 204 Query: 172 ----------------FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 ++ ++ L I WL + R IRD Sbjct: 205 LRGNNGLSGLQNIPGLLHVPQSTLALWFFWASAFALGLGYVIFAWLVSGKFGSVIRGIRD 264 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ L + KL F +++ G+AGA + I+P +I + V + Sbjct: 265 NEARVRFLGYHVEHYKLVIFTLTAIVSGLAGALYYPQAGIINPAEIAPIASIYLAVWVAI 324 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L A++ G L + ++ L+ + V L Sbjct: 325 GGRGRLYGAVIGAAVVSLASSWFTG-GGAPDIDLGFYVINWTDWWLVLLGLGFVAVTLFF 383 Query: 336 SHSLLRL 342 + L Sbjct: 384 PRGIGGL 390 >gi|256375808|ref|YP_003099468.1| urea ABC transporter permease [Actinosynnema mirum DSM 43827] gi|255920111|gb|ACU35622.1| urea ABC transporter, permease protein UrtB [Actinosynnema mirum DSM 43827] Length = 292 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 87/291 (29%), Gaps = 25/291 (8%) Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 + G +G++++ GAY+ ++ G S +LL +A + + SL Sbjct: 26 TFTFGQMGVVNMAHGEFVMAGAYTAYLVQGALGGSAFLLSLPAAFVVAGLLGLALEASLL 85 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 R + TL+++ +L + G + V Sbjct: 86 RRFHGRPLDTLLLTWGVSLVLQQVARDVFGAPNVQVVSPP----------WLVGGVELLG 135 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 V +++ + + L+L R+ R + N++ F Sbjct: 136 VRLPHNRVFIIGLAALCAVGVWLYLARSPQGRRVRAVVQNRELAACSGVATGRVDRLTFL 195 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 + S G+AG A + + + +V+ GG+ L A L + Sbjct: 196 LGSGLAGVAGV--ALTLVGPVGPTLGGAYLVDAFLVVVAGGLGQLRGAVLAAVALGFLNS 253 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L++ A+ + + R + LR S Sbjct: 254 FLELYTDASLAKA-------------LVLAAVIVFLQFRPQGMFVLRGRSL 291 >gi|301384779|ref|ZP_07233197.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302060727|ref|ZP_07252268.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302130815|ref|ZP_07256805.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 305 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 17/303 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + ++ A GL+I+ G +G++++ +GAY+ +L + + + P Sbjct: 17 NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTYVLSTLVQTYMPSMQPYYF 76 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + A ++ + + + +L W + + + Sbjct: 77 FFAIALSFVVAGSIGWVVER--VMISRLYHRPLDTLLATWGLSLVMQQALRSIFGAREVS 134 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + S + +V+ L+ I L L RT R N+ Sbjct: 135 ANPPEWLMGAVSLSDTIEIPRNGLFVMALTVLLTCGIFLMLYRTRWGLHVRATVQNRVMS 194 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ FA+ G+AGA A + + + +V+ GG S Sbjct: 195 RAVGINTREVDRMTFALGCGVAGVAGA--AFTTIGSTGPTAGSLYIVDTFLVVVFGGAQS 252 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + + + +L A+ L++LMR L Sbjct: 253 LLGTIASAFTIAQTQSIAEFFMSGSMAKVLTLS-------------AVILILLMRPQGLF 299 Query: 341 RLR 343 + Sbjct: 300 SSK 302 >gi|254477775|ref|ZP_05091161.1| inner-membrane translocator [Ruegeria sp. R11] gi|214032018|gb|EEB72853.1| inner-membrane translocator [Ruegeria sp. R11] Length = 353 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 89/313 (28%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + L S + + Q+ I + A S+V+ + G + L+ Sbjct: 45 LIVLVLSVIVFGLLLGSKFFSPFALTLILQQVGIVGIVACAQSLVILTAG-IDLSVGAIM 103 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYGL + + + CG I G + + Sbjct: 104 VLSSVVMGQFTFRYGLPPEIAVVCGLICGTFCGFINGWLVARMKLPPFI----------- 152 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + I +Y A+ T F + Y ++ M L Sbjct: 153 -VTLGMWQIVLATNFLYSANETIRSQTIAAEAPLLQLFGEKIKLGGAVFTYGVIFMVLLV 211 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + LR TA + D+ A + +S + +S AG Sbjct: 212 ILLAYVLRHTAWGRHVYAVGDDPDAAELSGVKVNRVLISVYMLSGLICAFAGWAMIGRIG 271 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP + + + ++VI GG S+ I+ + + Sbjct: 272 SVSPTSGQLANIESITAVVIGGISLFGGRGSILGTFFGALIVGVFTLGLRLLGADAQWTY 331 Query: 310 LKFDCSFNMRHTT 322 L Sbjct: 332 LLIGLLIIAAVAV 344 >gi|170751879|ref|YP_001758139.1| urea ABC transporter, permease protein UrtB [Methylobacterium radiotolerans JCM 2831] gi|170658401|gb|ACB27456.1| urea ABC transporter, permease protein UrtB [Methylobacterium radiotolerans JCM 2831] Length = 308 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +Y++ A GL+I+ G +G++++ +GAY + + + + L P+ I Sbjct: 22 LILFSVYLLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQTYLPALFPIYFFI 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + L + +L W + +G Sbjct: 82 AMGLAFLASGALGMLVEWGL--IRFLYKRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + S + + + I +V+ ++ S+ L + R+ R + N+ + Sbjct: 140 LPSWLIGSVQVTDTIEIPINGLFVMAVTILITVSVALLIFRSRFGQQVRAVMSNRAMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + G+AG+ F + + IV+ GG SL Sbjct: 200 VGIDTEKVDRYTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + ++A+ ++++R L L Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VITLLAVVGILMLRPQGLFTL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|146313492|ref|YP_001178566.1| branched-chain amino acid transporter permease subunit LivH [Enterobacter sp. 638] gi|145320368|gb|ABP62515.1| L-isoleucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-leucine ABC transporter membrane protein [Enterobacter sp. 638] Length = 308 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 96/312 (30%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + LI + L + +T G Sbjct: 72 LVGAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWIVGASENFSASITTMQLVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIG 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|148264184|ref|YP_001230890.1| inner-membrane translocator [Geobacter uraniireducens Rf4] gi|146397684|gb|ABQ26317.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Geobacter uraniireducens Rf4] Length = 294 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 92/290 (31%), Gaps = 13/290 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ S IY + G +I+ S G+++ +G + L ++ I Sbjct: 9 QYVLSGLSTGAIYALIGLGFAIIYNSTGIINFAQGEFVMLGGMLSFFFLTTLKLPLFASI 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P++ S A G+ +++ + ++ +I++ + + GK Sbjct: 69 PLAVFTSTAAGIAFERLAIRPLKNATPMSLVIITIGASIFIRGLAMLLWGKDTHA----- 123 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + S + ++ + + L+ T A R N Sbjct: 124 ------LPSFSGNDPISVAGATILPQHIWIFAITLLVIIANKLFFYYTISGKAMRACAFN 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++A + + L +F +SSA MAG A + I+G Sbjct: 178 RRAASLVGIDVKRMVLFSFVISSALGSMAGIIIAPLTMTA--YDVGIMLGLKGFCAAIIG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 GM+S +L + L G+ + + F + + Sbjct: 236 GMSSGVGTVIGGLVLGTLESLGAGLISSGYKDAIAFIILLLLLFVRPQGL 285 >gi|163845511|ref|YP_001623166.1| hypothetical protein BSUIS_B1425 [Brucella suis ATCC 23445] gi|163676234|gb|ABY40344.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 315 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 105/324 (32%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + LI A +I+ G G S + Y +G Sbjct: 6 ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I ++ L + + + + M++GLP L+ +G Y AIATL + ++ I Sbjct: 66 AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + F Y L + ++ + Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ IR+N++ ++ K+ A +S AF MAGA A + Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ N+ +I + + GG ++ L V ++ Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 I + +++ L Sbjct: 269 TDVAGMFFGIVIVAAVVLMPRGLA 292 >gi|89076721|ref|ZP_01163007.1| ribose ABC transporter, permease protein [Photobacterium sp. SKA34] gi|89047620|gb|EAR53229.1| ribose ABC transporter, permease protein [Photobacterium sp. SKA34] Length = 327 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 30/312 (9%), Positives = 87/312 (27%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + + G+ + + + F Sbjct: 88 LCGAFAASMIALEVPVLIAVPTALLAGALLGGISGVIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ A Sbjct: 136 TLVTMTLLRGITMVYTDGRPISTGFTDTGDAFAWFGTGYALGIPVPVWLMVIVF-----A 190 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L T + N+ A + K+ +A+ +AG + Sbjct: 191 GVWYLLNHTRFGRYIYALGGNESAARLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|18313086|ref|NP_559753.1| branched-chain amino acid transport permease protein [Pyrobaculum aerophilum str. IM2] gi|18160593|gb|AAL63935.1| branched-chain amino acid transport permease protein [Pyrobaculum aerophilum str. IM2] Length = 319 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 110/324 (33%), Gaps = 11/324 (3%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V L+ ++ + + + + + + V+ + GL++ + + + + +G Sbjct: 6 VFIVLVAWIVISSFYFPREVADALVYASVLVLASVGLTLTYQTTKVPNFAHGVFINLGVM 65 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + + + Y S + +P++ ++S A + + L ++M+ + NI+ Sbjct: 66 AALTVAQIYKTSPYAALPLAVVLSTASSLALYFFLLPLYKRQSPPEVMMMATMAYNIVFI 125 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + + R ++ +Y + + + Sbjct: 126 GVL--------NAYADWIGRAAGIFTRGITLRPYDVEILGTAGVYILAPLTASAISLALY 177 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 +T I A R +N++ +L + A+A+S A G+AG F + Sbjct: 178 LFLKTKIGTALRAAVENEELARTLGINVERMYAIAWAISGAVAGVAGVFLPLYIEA--TP 235 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD-CSFNM 318 + + I+GG+ ++ ++ V L N+L Sbjct: 236 DVGWLLLASFFAASIVGGLNNIYGALAGGVLMGFVELLGTIQFAALLNALFATPQYQVTA 295 Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342 + ++A+ + +L+ LL Sbjct: 296 YRPLVPLLAIAITLLISPKGLLGR 319 >gi|260431813|ref|ZP_05785784.1| ribose transport system permease protein RbsC [Silicibacter lacuscaerulensis ITI-1157] gi|260415641|gb|EEX08900.1| ribose transport system permease protein RbsC [Silicibacter lacuscaerulensis ITI-1157] Length = 357 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + L S + + Q+ I + A S+V+ + G + L+ Sbjct: 49 LIVLVAAILIFGALLGAKFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIM 107 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYGL + I I A G + G + + Sbjct: 108 VMSSVVMGQFTFRYGLPPAVAILCGLAIGTAIGAVNGFLVSRVKLPPF------------ 155 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + I +Y + + F + F + ++ M L Sbjct: 156 IVTLGMWQIVLAANFLYSQNETIRSQEIEANAPILQLFGAKFNVGGAVFTVGVIFMLVLI 215 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + LR TA + D+ +A + +S + +S AG Sbjct: 216 LVLAYALRHTAWGRHVYAVGDDPEAAELSGVNVHRTLMSVYMLSGLICAFAGWALIGRIG 275 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP + + + ++VI GG S+ I+ + + Sbjct: 276 SVSPTSGQLANIESITAVVIGGISLFGGRGSILGSLFGALIVGVFTLGLRLLGADAQWTF 335 Query: 310 LKFDCSFNMRHTT 322 L Sbjct: 336 LLIGMLIIAAVAV 348 >gi|170745142|ref|YP_001766599.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] gi|170658743|gb|ACB27797.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] Length = 299 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 107/318 (33%), Gaps = 27/318 (8%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 + + + IYV+ GLS++ G + +++ + +GAY + Sbjct: 4 IAIGGFPLDLLALQLVTGIALGAIYVLVGIGLSLIFGLMNVVNFAHGAFFMVGAYV-GVF 62 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 Y S WL + + + G G+ + ++ L+++ ++++ I Sbjct: 63 LYGYTGSFWLSLVAAPLAMGLLGLAVERVLVRPLYGRGIDDPLLLTFGLSYVMVESVRIA 122 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G+ A G + ++ +++ + ++ L++ RT Sbjct: 123 FGLTGLPFAAPPELRGA----------VDLGIGYFPLYRLFLIGFALAVVGALWLFIERT 172 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 R + + L I L+ FA+ A G+AG A + Sbjct: 173 PFGLVIRAGARDPQIVQVLGIEIAKVWLAVFALGCALAGLAGILAAPLQGV--TPEMGIP 230 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + ++GGM SL+ A I+ VV + + + Sbjct: 231 VLAEAFVVTVVGGMGSLAGAVLAGLIVGVVVAMTSLVAPDMTK--------------MAI 276 Query: 325 VIALFLVILMRSHSLLRL 342 + LV+L+R LL Sbjct: 277 FALMALVLLVRPRGLLGR 294 >gi|312879835|ref|ZP_07739635.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Aminomonas paucivorans DSM 12260] gi|310783126|gb|EFQ23524.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Aminomonas paucivorans DSM 12260] Length = 293 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 84/303 (27%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G S+V L + IG Y+ G +IW+ + Sbjct: 8 VINGLSLGSVYALIAVGYSLVYSILLFSNFAHGGFLVIGGYACYYALKAMGTNIWVAAVL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G ++ + K + + ++ ++ G + A Sbjct: 68 SLLAGGVSAILTERLAYKPIRERTNVTLYLLIASMGMSIVIENLFVVTVGGRFRALPPVI 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V F L+ + L+L +T A R N + Sbjct: 128 PTDPVS--------LFGLATTSAFDLLSLVTSVVCLVGLQLFLVKTKWGLAIRAASYNLR 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F V+ + G F + + I ++GG+ Sbjct: 180 TAGLMGVNVNLLISIVFFVAGLLAAVGGIFLSVRY---TLYPQLGMITIKAFVAAVIGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + IL L G F ++ L + +L+ Sbjct: 237 GSLPGAVVGSIILGLAEMLTAGFISSQF-------------RDLVVFALLIVTLLISPTG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|311103575|ref|YP_003976428.1| urea ABC transporter permease UrtB 1 [Achromobacter xylosoxidans A8] gi|310758264|gb|ADP13713.1| urea ABC transporter, permease protein UrtB 1 [Achromobacter xylosoxidans A8] Length = 314 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 94/307 (30%), Gaps = 17/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + I ++ A GL++V G +G++++ A+GAY+ ++ + + + V Sbjct: 24 FFNGISLFSILLLMAIGLAVVFGLMGVINMAHGELMAMGAYTTYLVSAAFQHWAPGWMDV 83 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ + +L W + Sbjct: 84 YLFAAIPLAFLVTFAFGYVLERGF--IRWFYNRPLDTLLATWGLSLILQQAYRSIFGAQE 141 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + S + P+ + + + ++L ++ + L L R+A R + N+ Sbjct: 142 VSVPLASWLSGAWEPTPDLQFPLNRIFILGLTLLVAVGVYLLLYRSAWGLRVRAVTQNRA 201 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ FA+ S G+AG F + + +V+ GG+ Sbjct: 202 MAGAVGINTRRVDALTFALGSGLAGIAGCVFTMIGS--TNPGTGQLYIVDSFIVVVFGGV 259 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A + + + + + + R + Sbjct: 260 QSLLGTAFSGLAIAQSQTTLEYLMSGSMAKVTILVLVIVVLY-------------FRPNG 306 Query: 339 LLRLRTP 345 L +T Sbjct: 307 LFANKTR 313 >gi|89071303|ref|ZP_01158465.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] gi|89043183|gb|EAR49418.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] Length = 336 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 35/310 (11%), Positives = 84/310 (27%), Gaps = 19/310 (6%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIG---------AYSYVILGSRYGLSIWLLIPVS 99 + A G++++ G L + A G A + + L +P+ Sbjct: 25 LALGALGVTLIYGILRFSNFAHGDTMAAGTTATILFTWALQAAGVSLGPLPTALLALPLG 84 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++G + +F A +++ + I + Sbjct: 85 IAVAGLLLLGTDRVVYRFYRARKAAPVILVIVSMGVMFIYNGLVRFVIGVDDQNFADGTR 144 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 R + + ++ + A + +L RT + R DN+ Sbjct: 145 FLISARDFRDMTGLEEGLALKSTQVITIVTAVVVVALLFWFLNRTRTGKSMRAFSDNEDL 204 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + +A +AG + + F + + + I+GG+ Sbjct: 205 ALLSGINPEKVVTVTWLIVAALATVAGTLYGLDKSF--KPFTYFQLLLPIFASAIVGGLG 262 Query: 280 SLSKIAKATAILIG--------VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 S ++ + ++ + + + L +V Sbjct: 263 SPLGAIAGGFLIAFAEVTVTYPLKKILGYLMPESLEPDGLVQLLSTDYKFAVSFVILIVV 322 Query: 332 ILMRSHSLLR 341 +L R L R Sbjct: 323 LLFRPTGLFR 332 >gi|217968889|ref|YP_002354123.1| branched-chain amino acid ABC transporter permease [Thauera sp. MZ1T] gi|217506216|gb|ACK53227.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 324 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 120/308 (38%), Gaps = 20/308 (6%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 Y + Y + G+ +VVG G ++L A+GAY+ +L +R + L Sbjct: 31 GTDYALGKATLVATYAIAGLGVVVVVGQAGQIALGQAALVALGAYAQALLVARGVPAP-L 89 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 +PV+A G + LP+ + G Y ++TL + I + L +W+ +T+G AG+ V Sbjct: 90 ALPVAAAAGALGGALASLPARRLGGLYFGMSTLAFALIVEEALARWESLTHGAAGLTVGA 149 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + V + + L+ L + AWR +R Sbjct: 150 FTLAGWR---------------ADSTLAQATVSVAVLALAMLACARLFASRHGRAWRAVR 194 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 D++ A + AK+ AF V A G+AG +A ISP+ F + ++ + Sbjct: 195 DDEIAAAACGIDNDAAKMQAFVVGGALSGLAGGLYAHWIGFISPEQFGLVFSFELLMLAF 254 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334 +GG L+ A +++ + L + L + L + V+L+ Sbjct: 255 IGGARRLAGAAWGALVIVAIPPLISLLRD----RLPGDWARASGLELLLFGAVIVGVVLL 310 Query: 335 RSHSLLRL 342 R L Sbjct: 311 RPAGLAGE 318 >gi|237798341|ref|ZP_04586802.1| inner-membrane translocator [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021193|gb|EGI01250.1| inner-membrane translocator [Pseudomonas syringae pv. oryzae str. 1_6] Length = 352 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 80/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ + I +I+ + Sbjct: 79 ITFGLLGVINMAHGEMLMLGAYSTYMVQLMFQRYAPGAIEYYPLIALPVAFFVTAAIGMA 138 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W + +A + + + + Sbjct: 139 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPAWLSGGIQVLPNL 196 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ F+ L L +T + R + N+ + AF + Sbjct: 197 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 256 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L ++ Sbjct: 257 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 314 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 315 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 349 >gi|86751313|ref|YP_487809.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86574341|gb|ABD08898.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 339 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 93/298 (31%), Gaps = 16/298 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAM 101 ++ + A GL++V G + +L+ A+GAY ++ + V+ Sbjct: 51 LAMGMMIFIMASGLTLVFGLMDVLNFGHGAFIAVGAYVATLVLLPLAGMSQADSLLVNLA 110 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + + S + L + ++ A + Sbjct: 111 VLAPAALAAMAVSGALGLVVERVLILPVYGQHLKQILMTTGGLIVAEQALYALWGPQIIP 170 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + + VLL + +I L L RT I R +N++ Sbjct: 171 LPLPTALRGSFIIGDIAIAKYRLLVLLVGIAVFVAIQLVLNRTKIGLLIRAGVENREMVE 230 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 +L I L F V SA G G +A R+++ +++ +VI+GG+ S+ Sbjct: 231 ALGYHIKRLFLGVFMVGSALAGFGGIMWALYREQV-HASMGNDLTVLIFIVVIIGGLGSV 289 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ V + ++ + +++ R L Sbjct: 290 GGCFIGALLVAMVANYGGFL--------------VPKLALVSNILLMVAILMWRPRGL 333 >gi|28900940|ref|NP_800595.1| ribose ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|153836717|ref|ZP_01989384.1| ribose transport system permease protein RbsC [Vibrio parahaemolyticus AQ3810] gi|260366154|ref|ZP_05778614.1| ribose transport system permease protein RbsC [Vibrio parahaemolyticus K5030] gi|260879796|ref|ZP_05892151.1| ribose transport system permease protein RbsC [Vibrio parahaemolyticus AN-5034] gi|260894470|ref|ZP_05902966.1| ribose transport system permease protein RbsC [Vibrio parahaemolyticus Peru-466] gi|260903006|ref|ZP_05911401.1| ribose transport system permease protein RbsC [Vibrio parahaemolyticus AQ4037] gi|28809386|dbj|BAC62428.1| ribose ABC transporter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|149750066|gb|EDM60811.1| ribose transport system permease protein RbsC [Vibrio parahaemolyticus AQ3810] gi|308086429|gb|EFO36124.1| ribose transport system permease protein RbsC [Vibrio parahaemolyticus Peru-466] gi|308092286|gb|EFO41981.1| ribose transport system permease protein RbsC [Vibrio parahaemolyticus AN-5034] gi|308108405|gb|EFO45945.1| ribose transport system permease protein RbsC [Vibrio parahaemolyticus AQ4037] gi|308114760|gb|EFO52300.1| ribose transport system permease protein RbsC [Vibrio parahaemolyticus K5030] Length = 327 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAASLIAMEVPVLIAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|311103878|ref|YP_003976731.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310758567|gb|ADP14016.1| inner-membrane translocator 13 [Achromobacter xylosoxidans A8] Length = 291 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 113/300 (37%), Gaps = 41/300 (13%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ + + + A + + + G+L++ IGAY+ +L Y + + Sbjct: 13 NLVLTLGTNALLALSIWLTLA-CGMLAMANAAFMGIGAYTAALLTMNYDAPFSVALAGGM 71 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++GLP+L+ G YLA+ATL E+ + ++ + IT G G+ +L Sbjct: 72 AAPALVAALIGLPTLRLSGVYLAMATLGFGEVVRVTILNTESITGGALGLNGIPQLTQWW 131 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 ++ + ++ +R + I ++ IR ++ A Sbjct: 132 H-------------------------VVLAVVIVLFVLWRVRASKIGRSFDAIRGDETAA 166 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + K+ AF + G+AGA A I P+ + F + ++++ ILGG+ Sbjct: 167 GLMGIDVRANKMLAFVAGAMIAGLAGALNAHLTFFIGPNEYGFDRGVEILTMAILGGIGG 226 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L+ + I+ + E+ G + L +++L + Sbjct: 227 LAGPVLGSFIITVLPEMLRGFAD---------------LRLVANGVILVVIVLFLPQGIW 271 >gi|167720834|ref|ZP_02404070.1| putative amino acid ABC transporter, permease protein [Burkholderia pseudomallei DM98] Length = 278 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 81/294 (27%), Gaps = 17/294 (5%) Query: 55 GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114 GL+I G +G++++ IGAY+ ++ + + + + Sbjct: 1 GLAITYGLIGVINMAHGEFLMIGAYATYVVQTFVQRYLPGAFDWYPLAAIPVSFAAAAAL 60 Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174 + + + +L + + + S + Sbjct: 61 GIVLER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVM 118 Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234 +I +L + L +T + R + N++ + A Sbjct: 119 QNLILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYA 178 Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 FA + G+ G A S+ S + V+LGG+ ++ L V Sbjct: 179 FAFGAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLV 236 Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + +++ + L I R + L+ S Sbjct: 237 SKAIEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 277 >gi|220936271|ref|YP_002515170.1| urea ABC transporter, permease protein UrtC [Thioalkalivibrio sp. HL-EbGR7] gi|219997581|gb|ACL74183.1| urea ABC transporter, permease protein UrtC [Thioalkalivibrio sp. HL-EbGR7] Length = 382 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 99/349 (28%), Gaps = 36/349 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L V+ L L + T ++ + L + A GL + G G+LSL I + Sbjct: 13 GLGGVLIMAALILVVLPTLMDIDQLNLAGRFLAFAFVAVGLVLSWGYGGVLSLGQGIFFG 72 Query: 76 IGAYSYVIL-----------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 IG Y+ + + I + + + S L + Sbjct: 73 IGGYAMAMFLKLEASDPESTSIQTTPGIPDFMDWNQITSLPWFWEPFYSLTFTIIAILVL 132 Query: 125 ATLIMSEI-----------FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L I +I + I L + L + Sbjct: 133 PALFAWIIGTAMFKRRVSGVYFAIITQAIVVILTILIIGQQGLTGGVNGITDLRTLKGWD 192 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 +YYV + + + +W+ T +RD + + K+ Sbjct: 193 IRTDEALFILYYVNAFLLIGAVLLGMWILSTKYGRILIAMRDREDRVRFSGYDVANFKVF 252 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 F V++ G+ GA F +SP + +I + +GG SL I+ Sbjct: 253 VFCVAALLSGIGGAMFTLQVGFMSPSIIGIVPSIEFVIFAAVGGRLSLLGAVYGALIVSY 312 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ ++ V++ + L L Sbjct: 313 LRTTVAE--------------AYPQLWLFVIGGVFIAVVMFAPYGLAGL 347 >gi|308188472|ref|YP_003932603.1| High-affinity branched-chain amino acid transport system permease protein livH [Pantoea vagans C9-1] gi|308058982|gb|ADO11154.1| High-affinity branched-chain amino acid transport system permease protein livH [Pantoea vagans C9-1] Length = 308 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y I+ + + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTTWL 71 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 +I+ + I I + R Sbjct: 72 MIAAGFVMAVIISSAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ ++R + + A R ++ Sbjct: 132 ALPSLITGQWTVGESNGFAAAISTMQIVIWVVTFLAMLALTTFIRYSRMGRACRACAEDL 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +AG I+ F + + +LGG Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSIN-PFIGFMAGMKAFTAAVLGG 250 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ +L L + ++ F L +V+L+ Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297 Query: 338 SLLRL 342 +L Sbjct: 298 GILGR 302 >gi|303231101|ref|ZP_07317841.1| branched-chain amino acid ABC transporter, permease protein [Veillonella atypica ACS-049-V-Sch6] gi|302514232|gb|EFL56234.1| branched-chain amino acid ABC transporter, permease protein [Veillonella atypica ACS-049-V-Sch6] Length = 293 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 99/308 (32%), Gaps = 27/308 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A GL++V G L ++++ + IGA+ + + + + ++I++ + V Sbjct: 6 LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFDVNIFVALIV 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G ++ + + +A LI + L + G Sbjct: 66 AMAVGAVLGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + M + + + ++T I A R + + Sbjct: 126 IGGLIDFGVFKISMVQIIGLGVSVLLMVILNVVI-----------KKTKIGKAIRAVSMS 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++SA AG S + I P M ++++ILG Sbjct: 175 TETAALLGINPTMIISVTVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +++ IL F + F + +++ R Sbjct: 234 GLGNITGAMVGGFILGIAEIFSVAYGASTFRDAVAFG-------------LIIVLLFWRP 280 Query: 337 HSLLRLRT 344 L + Sbjct: 281 QGLFGSKD 288 >gi|159184145|ref|NP_353099.2| ABC transporter, membrane spanning protein (sugar) [Agrobacterium tumefaciens str. C58] gi|159139480|gb|AAK85884.2| ABC transporter, membrane spanning protein (sugar) [Agrobacterium tumefaciens str. C58] Length = 360 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 93/313 (29%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + G S + + Q+ I + S+V+ + G + L+ Sbjct: 52 LIVLVLSLAIFGMTLGGKFFSAFSLTLILQQVAIVGIVGAAQSLVILTAG-IDLSVGAIM 110 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYGL L I + CG I G+ + R + + + Sbjct: 111 VLSSVVMGQFTFRYGLPAELSIICGLAVGAFCGFINGVLVSRMRLPPFIVTLGMWQIVLA 170 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + T I + F ++ I Y +L M L Sbjct: 171 TNFLYSANETIRAQDIVQQAPILQF------------FGNNIRIGNAVFTYGVLAMVLLV 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + L RTA + D+ A + + + +S AG Sbjct: 219 ALLWYVLNRTAWGRHLYAVGDDPDAAELAGVNVKRMLTTVYTLSGLICAFAGWALIGRIG 278 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP +F+ + ++VI GG S+ + I+ + + Sbjct: 279 SVSPTAGQFANIESITAVVIGGISLFGGRGSIMGMIFGALIVGVFSLGLRLIGTDPQWTY 338 Query: 310 LKFDCSFNMRHTT 322 L + Sbjct: 339 LLIGVLIILAVAI 351 >gi|299066767|emb|CBJ37961.1| putative ABC-type branched-chain amino acid transporter, membrane component (livH) [Ralstonia solanacearum CMR15] Length = 325 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 27/321 (8%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + L+ M + GL+++ +G+L+ Y +GAY ++ W + Sbjct: 17 NLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVVSGYL--GFWAALI 74 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 V+ ++ GA G ++ L+ Y +A L+ + ++ + + G L Sbjct: 75 VAPLLVGALGALVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 125 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + V + F + + +++L + I L L RT I + + Sbjct: 126 AVPYRVPEALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 185 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +L + + F A G+AG ++ + IV + ++GG Sbjct: 186 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 243 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL------- 330 M SL A+ ++ + ++ + L K + N + V L + Sbjct: 244 MGSLVGAFIASLLIGCIQTFAVTLDVSVTSLLGKLGVALNPDVPLISVWNLTIAQVAPVL 303 Query: 331 -------VILMRSHSLLRLRT 344 +++ R L+ R Sbjct: 304 PYLLLVLMLIFRPRGLMGTRE 324 >gi|269964359|ref|ZP_06178601.1| D-ribose transport system permease protein [Vibrio alginolyticus 40B] gi|269830856|gb|EEZ85073.1| D-ribose transport system permease protein [Vibrio alginolyticus 40B] Length = 327 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + + + + + + F Sbjct: 88 LCGAFAASMIALEVPVLVAVPTALVAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTEGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|218691742|ref|YP_002399954.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli ED1a] gi|218429306|emb|CAR10266.2| leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|324009342|gb|EGB78561.1| high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Escherichia coli MS 57-2] Length = 308 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y I +Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFMIIAALMMMGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|25027557|ref|NP_737611.1| putative ABC transporter permease protein [Corynebacterium efficiens YS-314] gi|259507035|ref|ZP_05749935.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] gi|23492839|dbj|BAC17811.1| putative ABC transporter permease protein [Corynebacterium efficiens YS-314] gi|259165313|gb|EEW49867.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] Length = 294 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 96/310 (30%), Gaps = 25/310 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + ++ A GLS+ G +G++++ +GAY+ ++ + + L+ Sbjct: 8 LVAGLSVGSVLLLVAVGLSLTFGQMGVINMAHGEFIMVGAYTAFVVQGVINSAGFSLLIS 67 Query: 99 SAMISGACGMIMGLP-SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + G++ L R Y +++ ++++ A Sbjct: 68 IPLAFAIGGLLGVLLEQTLLRHLYHRPLDTLLATFGVGLILQQLARDIFGAPAVDVRAPE 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 +L + + ++L A + ++L R+ R + N+ Sbjct: 128 WLRGHT---------EILGTLVPVSRLFILFLALASVAGLAVFLNRSIWGRRIRAVVINR 178 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + F + S G+AG A + + + + +V GG Sbjct: 179 DLAETNGINTRATDRMTFFIGSGLAGIAGV--AITLIGATGPTIGQNYIVDAFLVVAAGG 236 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + + +L + +++IA+ + R Sbjct: 237 IGKIKGAVIMAFVLGIMQAFIEYSTGASIAK-------------FIVLIAVVAFLQFRPQ 283 Query: 338 SLLRLRTPSN 347 L + RT S Sbjct: 284 GLFQTRTRSL 293 >gi|300865986|ref|ZP_07110720.1| Inner-membrane translocator [Oscillatoria sp. PCC 6506] gi|300335977|emb|CBN55878.1| Inner-membrane translocator [Oscillatoria sp. PCC 6506] Length = 358 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 111/366 (30%), Gaps = 45/366 (12%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSM--------------GIQILIYVMFA 53 + + IL L V Y +LL + + + + + + + A Sbjct: 1 MKNWRIILLYLGVAYIILLLGPIAGFDLPRIVVEIVRSPQVLIQQLLVGLVNGALLAIIA 60 Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYS-----------YVILGSRYGLSIWLLIPVSAMI 102 G ++V G + L++ Y +G ++ + ++ + + S Sbjct: 61 LGYTMVYGIIELINFAHGDLYMLGGFAALTVMGALGIQDGAPLAVAIPAMLVALIASTGF 120 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG------KAGIYVADRL 156 +I + + + +A LI + I G G A Sbjct: 121 CAGMNIITERYAYRPLRNAPRLAPLISAIGVSFIFQNMGLFWGGLRAFFPVMGTNSAAPK 180 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 F R I S +++ VL+ L S+ L+++ T A R N Sbjct: 181 SFPDLLPRIDILKALGIDSSIVFTTKDLIVLVVATVLMVSLHLFVKYTRWGKAMRATAQN 240 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + F + A G AG + I M F+ + + +LG Sbjct: 241 RDAAKIMGINVDQIIALTFLIGGALAGAAGLLVGLYNNTIVFTM-GFTAGLRAFTAAVLG 299 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ ++ + + + + F L +++ R Sbjct: 300 GIGNIVGAMLGGVLIGELSSISDQYLSSRWTNAWVF-------------AVLVIILAFRP 346 Query: 337 HSLLRL 342 LL Sbjct: 347 GGLLGE 352 >gi|86748697|ref|YP_485193.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86571725|gb|ABD06282.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 433 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 113/329 (34%), Gaps = 32/329 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L L L S + + I ++FA +I++G G+LS + Y +G Sbjct: 24 VWIATALTLLLLPQIFSSGGSLTTFSLVGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83 Query: 79 Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 + ++ +++ + + L+ + M ++G + G A+ +L ++E+ Sbjct: 84 FLAIHAINLLGANKWAIPLPLVPLIGGMAGLFLAALIGWVMTQRSGTAFAMISLGLAELV 143 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + + G+AGI + + F+ +I +YY++ + Sbjct: 144 ASSALILRTFFGGEAGIS------------ANRTKLFKVFGLSFGPQIQIYYLVAAWTLI 191 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + L RT + +RDN + + + AF + F G+AGA A + Sbjct: 192 AIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFAGFFAGIAGALAAINF 251 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + + ++ V+ +GG+ + + + Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTILSLGLSDL------------ 299 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + V+L + L Sbjct: 300 ---TQVWQLYFGLFFIAVVLYAPGGITGL 325 >gi|320335127|ref|YP_004171838.1| ABC transporter integral membrane subunit [Deinococcus maricopensis DSM 21211] gi|319756416|gb|ADV68173.1| ABC-type transporter, integral membrane subunit [Deinococcus maricopensis DSM 21211] Length = 322 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 69/309 (22%), Positives = 114/309 (36%), Gaps = 36/309 (11%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y+ +G L+ A I+ G LSL Y IGAY++ IL L + Sbjct: 42 YLLQIGYFTLVAGTLALSWDILA-RSGQLSLAHAAFYGIGAYTFAILSKAGVAWP-LGLL 99 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 +A ++ +I+G + + G Y AIATL +E+ + ++ G + L Sbjct: 100 AAAALAALISVILGAVASRLSGMYFAIATLAFTEVTRTVVQNLPESFAGGPTGLLVPAL- 158 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 Y + LG+ L+ + L +R T + A+ IR + Sbjct: 159 ------------------LGGNSRAQYLLALGILVLAVLVSLTVRLTRLHAAFSAIRQGE 200 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIVISIVILG 276 L ++ KL AFA+SSA AG +A I+P D F + +I ++ I G Sbjct: 201 DVARVLGVNVVRYKLLAFAISSALAAAAGVLYAGKTFFINPGDTFSIATSIAPLTTSIFG 260 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ + +L EL F + + + L + IL Sbjct: 261 GLYTTLGPVLGATVLRVAEELL--------------HSQFKSGYLIVYGLVLIISILWLP 306 Query: 337 HSLLRLRTP 345 L+ L Sbjct: 307 RGLMGLLRR 315 >gi|313892697|ref|ZP_07826278.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Veillonella sp. oral taxon 158 str. F0412] gi|313442628|gb|EFR61039.1| putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH [Veillonella sp. oral taxon 158 str. F0412] Length = 293 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 100/308 (32%), Gaps = 27/308 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A GL++V G L ++++ + IGA+ + + + + ++I++ + V Sbjct: 6 LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTIFNVNIFVALIV 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G ++ + + +A LI + + + G Sbjct: 66 AMAVGAILGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFIESLALLLWGPQTRSFPPDY 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + M + + + ++T I A R + + Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSIVLMLILNIVI-----------KKTKIGKAIRAVSMS 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++SA AG S + I P M ++++ILG Sbjct: 175 TETAALLGINPTMIISVTVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +++ IL F + F + L++ R Sbjct: 234 GLGNITGAMVGGFILGVAEVFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280 Query: 337 HSLLRLRT 344 L + Sbjct: 281 QGLFGSKD 288 >gi|288960411|ref|YP_003450751.1| ABC transporter permease protein [Azospirillum sp. B510] gi|288912719|dbj|BAI74207.1| ABC transporter permease protein [Azospirillum sp. B510] Length = 310 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 90/305 (29%), Gaps = 11/305 (3%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + ++ + A GLS+V G + L++L + Y +GAY LG G + Sbjct: 9 LNGLQFGVLLFLVAAGLSLVFGVMDLINLAHGVQYMLGAYVAATLGVWTGSFWLGALLAL 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + + L L + + + + + Sbjct: 69 PVALLVGLALEWLVFRHLYRRDHLSQVLATFGVILTVDEATRALWGSA------PQTVLE 122 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + +IY + ++ + + + RT R + Sbjct: 123 PAWLSGGPMGGVEIVAGLIYPTYRLVIIGIGILVPLLLWFLVERTRAGMLVRAGATHPAM 182 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L I FA + G AGA + I+ ++++GG+ Sbjct: 183 VSALGVDIRRLFTVVFAFGAMLAGFAGALASPIFPVAPGMGDSVL--ILCFVVIVIGGVG 240 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS---FNMRHTTLMVIALFLVILMRS 336 S+ A ++ + + M LL + + L+ I + ++ R Sbjct: 241 SIRGAFIAALLVGLLDSIGRAMLPDLLRLLLDPSSARQTGAALASMLVYIVMAGILFFRP 300 Query: 337 HSLLR 341 L Sbjct: 301 AGLFP 305 >gi|291301245|ref|YP_003512523.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728] gi|290570465|gb|ADD43430.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728] Length = 320 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 82/313 (26%), Gaps = 24/313 (7%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-YVILGSRYGLSIWLLIPV 98 + IY + A G ++V G L L++ + +GA++ I Sbjct: 15 MDGLVIGGIYALIALGYTLVYGVLKLINFAHSEVFMLGAFAAVGIWTVLGVNEGPTPSLG 74 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLI---------MSEIFQNILIKWKPITNGKAG 149 ++ G+ + + L + + I + Sbjct: 75 GFILLAIVGLAAAMAASGGTALALEYIAYRPLRRKKAPRLVFLITAIGVSLALNEGMGVL 134 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 D LI + + +++ L ++ +++ RT Sbjct: 135 TSRDDVGVPEVFKQTILIDWDSGALGRLRVSDLDIGIIVMAFGLLVALDMFVNRTRPGAG 194 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R + + + F + G+A + I F + Sbjct: 195 IRAVAQDPDTAALMGINKNRIFALTFILGGLAAGVAAVMWDLRYSSI-KHSLGFLLGVKA 253 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + ++GG+ +L L + + + ++ F + Sbjct: 254 FTAAVMGGIGNLRGALVGGFALGLIENWSGAVFGNAWLDVVAFTVLVVV----------- 302 Query: 330 LVILMRSHSLLRL 342 ++ R LL Sbjct: 303 --LMFRPTGLLGE 313 >gi|254227591|ref|ZP_04921022.1| amino acid or sugar ABC transport systems, permease protein, putative [Vibrio sp. Ex25] gi|262395640|ref|YP_003287493.1| ribose ABC transport system permease protein RbsC [Vibrio sp. Ex25] gi|151939633|gb|EDN58460.1| amino acid or sugar ABC transport systems, permease protein, putative [Vibrio sp. Ex25] gi|262339234|gb|ACY53028.1| ribose ABC transport system permease protein RbsC [Vibrio sp. Ex25] Length = 327 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + + + + + + F Sbjct: 88 LCGAFAASMIALEVPVLVAVPTALVAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTEGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|319792603|ref|YP_004154243.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315595066|gb|ADU36132.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 337 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 103/284 (36%), Gaps = 12/284 (4%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 ++ + + +I I +FA L +++G G++SL + GAY+ Sbjct: 30 FVVWAVAFALPLLMPSHSLLVNEIAIVALFAMSLDLILGYTGIVSLGHAAFFGFGAYAAA 89 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + + + ++S G++ + L+ + TL + + + K Sbjct: 90 LFAKLVMPDPTVGLVFATVLSALLGLVASVTILRGSDLTRLMVTLGTALLLLELANKLDW 149 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ LG F +Y + L + + ++ L Sbjct: 150 LTGGADGLQGVVMGPVLGL------------FEFDLYGRTAAWYSLAVMLVLFLVMRRLV 197 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + IRDN+ ++ ++ + V++ G AGA A + S D+ Sbjct: 198 HSPFGATLKAIRDNRLRAMAIGIPVVSRLAVIYTVAAGIAGAAGALLAQTTGFASLDVLA 257 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 F + V+ ++++GG+ L + + + Y+ Sbjct: 258 FDRSADVLLMLVIGGVGWLYGGVAGAIVFKLLQNWLSAVTPQYW 301 >gi|114328499|ref|YP_745656.1| amide-urea transport system permease [Granulibacter bethesdensis CGDNIH1] gi|114316673|gb|ABI62733.1| amide-urea transport system permease protein [Granulibacter bethesdensis CGDNIH1] Length = 308 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I ++V+ A G++I+ G +G++++ +GAY + + I + I Sbjct: 22 LILFSVFVLMALGMAIIFGQMGVINMAHGEFMILGAYVTYLTSQLFSQFIPGAFAIYFPI 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + + + ++L W + +G Sbjct: 82 AVVLAFCASGLAGMLVEW--LMIRHLYKRPLDSLLATWGLSLIMQQIYRSVFGAREVGVN 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + S + I V+ ++ + L + R+ R + N+ + Sbjct: 140 LPEWMMGATHLSESIEIPINGLLVMGLTTLITVGVYLLMFRSGWGKQVRAVVQNRPMAAA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + G+AGA F + + +V+ GG +SL Sbjct: 200 VGIDTERVDRRTFGLGCGIAGVAGAAFTMIGS--TSPTAGQLYIVDTFLVVVFGGASSLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + ++++++ +++++R L L Sbjct: 258 GTIASAFTISQARSTLEFFLS-------------GSMAQVIVLLSVIIILMIRPQGLFVL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|83591923|ref|YP_425675.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] gi|83574837|gb|ABC21388.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] Length = 613 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 110/281 (39%), Gaps = 18/281 (6%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 ++ + Y S+ + LI + A L +++G+ G++S + +GAY + Sbjct: 318 VVLVLAAPRFLDAYGLSLLCEALILALSASALQLLMGTGGMVSFGHGAFFGLGAYGTAVA 377 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + GLS+ + + + + G G+++G + G YLA+ TL +EI + I+ +T Sbjct: 378 VVQGGLSLPIALACAPLAGGLGGLLVGWLISRLSGVYLAMLTLAFAEIIHALAIQAVGVT 437 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 G G+ + ++++ +C + + L Sbjct: 438 GGDNGLIGVWPPPW------------------AGDPAVFAWLVMAICLPALFGLRALALG 479 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 R +RD + + FA+ A G+AG FA + + P + Sbjct: 480 EFGRRLRALRDARSRAEASGIAAARLHALTFAIVGAGAGLAGGLFAFLKGSVFPAITAIP 539 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 ++ + +V+LGG+ +L+ + +G+ + + Sbjct: 540 TSVDALVMVLLGGLHALAGPLVGAFLYLGLESVVAARTDLW 580 Score = 46.8 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 90/304 (29%), Gaps = 26/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + A GLSI+ G +++ + IGAY L GL W + + Sbjct: 10 FLGGLASASSLFLVAAGLSIIFGVTRVVNFAHGTLFMIGAYLAYTLAETLGLGFWPALLL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G G ++ + L+ + L+ + I P+ G + Sbjct: 70 APLAVGGLGALIEIGLLRRIYRAPELFQLVATFALVLIASDVVPMIWGPEDLLGPRAPGL 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G + +++ + ++ L RT R ++++ Sbjct: 130 GGA----------VSVMGRAVPEYDLFLIALGPLVLGALWLVFTRTRWGLLVRAATEDRE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L T + FA+ + G+ GA V+ +V M Sbjct: 180 MVAALGTDQRWLFTGVFALGALLAGLGGALALPREAIGHGMDAGVIVQAFVVVVVGG--M 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A +L V F M + + V+++R Sbjct: 238 GSVPGAYLAAVLLGLVNAFGVAF--------------FPQGTLVTMGLVMGAVLIVRPRG 283 Query: 339 LLRL 342 LL Sbjct: 284 LLGR 287 >gi|170731459|ref|YP_001763406.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] gi|169814701|gb|ACA89284.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3] Length = 294 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W ++ ++ ++ GA G+ + L++ + L+++ ++ G Sbjct: 63 YFGLPYWAMLVLAPVLVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + +V+L R L Sbjct: 277 IMAIVLLFRPAGLFG 291 >gi|207722634|ref|YP_002253070.1| amino-acid transmembrane lipoprotein [Ralstonia solanacearum MolK2] gi|206587816|emb|CAQ18398.1| amino-acid transmembrane lipoprotein [Ralstonia solanacearum MolK2] Length = 293 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 109/303 (35%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y +FA G ++V G LG+++L+ + +GAY+ + + + + L +W + V Sbjct: 6 LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQVVAHFELPLWAALAV 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++SG G+++ L + +I Sbjct: 66 GFIVSGVAGLVIDAL--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L+ V +++ L A+++L L+RT + A R I ++ K Sbjct: 118 NLRFPAGLVSDASLDLGGVHLTPLELGIIVLSFVLMAALMLLLKRTQLGRALRAIAESPK 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L + L ++A G+AG + + P M + + + +++ILGG+ Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLAGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L L + F LFL++L+R Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|241202881|ref|YP_002973977.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856771|gb|ACS54438.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 354 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 94/314 (29%), Gaps = 19/314 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + G S + + QI I + ++V+ + G + L+ + Sbjct: 45 LIVLVLAIVIFGITIGGRFFSSYTLTLILQQIAIVGILGAAQTLVILTAG-IDLSIGVIM 103 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 I A + YG+ + + ++ G CG++ G + Sbjct: 104 VISAVIMGNVAITYGIPTPIAVAAGMLVGGLCGLLNGFLVAYMKLPPFI----------- 152 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + I IY A+ F SF + + ++ M L Sbjct: 153 -VTLGTWNIVMATNFIYSANETIRDTDVDEKAPLLHLFAVSFKLGSAVLTLGVIAMVLLV 211 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L TA + D+ +A L+ +A+S G+A Sbjct: 212 LVLWYVLNHTAWGRHVYAVGDDPEAAKLSGIQTKKVLLTVYAISGVIAGLAAWVSIGRNG 271 Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308 ISP N+ I+ ++GG+ S+ I+ V + Sbjct: 272 SISPSSAVTDFNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 331 Query: 309 LLKFDCSFNMRHTT 322 +L Sbjct: 332 VLLTGVLIIAAVAI 345 >gi|153940465|ref|YP_001389826.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum F str. Langeland] gi|168177800|ref|ZP_02612464.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum NCTC 2916] gi|168181327|ref|ZP_02615991.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum Bf] gi|226947690|ref|YP_002802781.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A2 str. Kyoto] gi|237793781|ref|YP_002861333.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum Ba4 str. 657] gi|152936361|gb|ABS41859.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum F str. Langeland] gi|182670508|gb|EDT82482.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum NCTC 2916] gi|182675512|gb|EDT87473.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum Bf] gi|226842075|gb|ACO84741.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum A2 str. Kyoto] gi|229262690|gb|ACQ53723.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum Ba4 str. 657] gi|295317913|gb|ADF98290.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum F str. 230613] Length = 290 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 106/304 (34%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G L +L+ G + + + S + + + L I + Sbjct: 6 LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFVFFTMISIFKIPLILAIIL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+G G+++ L + K A+A L+ S +L + G Sbjct: 66 TIVITGLIGVLLYLIAYKPVLKGDAMAPLLSSLGVSIMLEALGQLIWGTE---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + + + ++ L L + ++ ++ I R + N+K Sbjct: 116 -IIPFPINIPKGIYSIASIKLSNIQIFIFLFSITLMIILYKFIMKSNIGLQIRALSYNRK 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F++++ ++G + D + M I + ILGG+ Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL L + + F I L LV++++ + Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280 Query: 339 LLRL 342 + Sbjct: 281 IFGE 284 >gi|83749707|ref|ZP_00946686.1| LivH [Ralstonia solanacearum UW551] gi|207738528|ref|YP_002256921.1| amino-acid transmembrane lipoprotein [Ralstonia solanacearum IPO1609] gi|83723632|gb|EAP70831.1| LivH [Ralstonia solanacearum UW551] gi|206591896|emb|CAQ58802.1| amino-acid transmembrane lipoprotein [Ralstonia solanacearum IPO1609] Length = 293 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 109/303 (35%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y +FA G ++V G LG+++L+ + +GAY+ + + + + L +W + V Sbjct: 6 LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQVVAHFELPLWAALAV 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++SG G+++ L + +I Sbjct: 66 GFIVSGVAGLVIDAR--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L+ V +++ L A+++L L+RT + A R I ++ K Sbjct: 118 NLRFPAGLVSDASLDLGGVHLTPLELGIIVLSFVLMAALMLLLKRTQLGRALRAIAESPK 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L + L ++A G+AG + + P M + + + +++ILGG+ Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLAGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L L + F LFL++L+R Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|299068451|emb|CBJ39674.1| high-affinity branched-chain leucine/isoleucine/valine transporter subunit protein (ABC superfamily, membrane) [Ralstonia solanacearum CMR15] Length = 293 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 107/303 (35%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y +FA G ++V G LG+++L+ + +GAY+ + + + L +W + V Sbjct: 6 LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQAVAHFELPLWAALLV 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 SG G+I+ + L + +I Sbjct: 66 GFAASGVAGLIIDVL--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L+ V +++ L A+++L L+RT + A R I ++ K Sbjct: 118 NLRFPAGLVSDTSLDLGGVHLTPLELGIIVLSFALMAALMLLLKRTQLGRALRAIAESPK 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L + L ++A G+AG + + P M + + + +++ILGG+ Sbjct: 178 AAALLGINVEGLLLLTSFAAAALGGLAGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L L + F LFL++L+R Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|266625572|ref|ZP_06118507.1| urea ABC transporter, permease protein UrtB [Clostridium hathewayi DSM 13479] gi|288862522|gb|EFC94820.1| urea ABC transporter, permease protein UrtB [Clostridium hathewayi DSM 13479] Length = 299 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 85/283 (30%), Gaps = 16/283 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G +G++++ IGAY+ ++ + + + I + SL + Sbjct: 27 ITFGLMGVINMAHGEFIMIGAYTAYVVQNIFQAYFPSQVFDVYCIVAIILSFLAAASLGY 86 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + L I L ++L+ W + +G + + S V Sbjct: 87 VLERLVICRL-YGRAADSLLVTWGISLILQQAARSIFGSPNVGVKAPAFLERTIRISGMV 145 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++LL + + + +T R + N++ SL FA+ Sbjct: 146 ALPMKRIFILLIAVCCLTGVYVLMYKTRQGRNIRAVMQNREMAASLGVNTKRIDSMTFAI 205 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A + + + V++GG S+ + Sbjct: 206 GSGLAGLAGC--ALTWIGAIGPTLGTNYIVDTFMTVVVGGAGSILGSVLGAGFIGIGQTA 263 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + L+ + +++ R + Sbjct: 264 FEFLTSASIGK-------------VLIFACVIVLLQFRPKGIF 293 >gi|332285152|ref|YP_004417063.1| inner-membrane translocator [Pusillimonas sp. T7-7] gi|330429105|gb|AEC20439.1| inner-membrane translocator [Pusillimonas sp. T7-7] Length = 285 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 101/303 (33%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL+I+ G L +++ Y +GAY G+ WL + + Sbjct: 3 LLNSLDIGLLLFVIAVGLNIIFGVLNIINFAHGALYMLGAYLAYSCVILLGMPFWLTLLI 62 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + L+F + +L+++ I+ + + G + Sbjct: 63 APLGVAVLAIAIDRLMLRFIYEREISDSLLLTFSLLLIINESVRLIWGTGIHVIDPP--- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L++ + Y ++ +V+ + + RT + R +++ Sbjct: 120 ------TLLQGTVALPGGISYPLYSLFVVGVGLLILFGLWYLFNRTRVGKIMRAAALDRE 173 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L FA + + G A R I +V++GG+ Sbjct: 174 MAQVLCIDTKLVITGVFAFGAWLAAVGGVVAAP--MRAIDPGMGDKIIIESFIVVVIGGL 231 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S +L + L F + L I + +V+L++ H Sbjct: 232 GSFPGALLGAIVLGLMYGLGGRF--------------FPEVNLILPFIGMAIVLLLKPHG 277 Query: 339 LLR 341 L+ Sbjct: 278 LMG 280 >gi|315614725|gb|EFU95365.1| high-affinity branched-chain amino acid transport system permeaseprotein braD [Escherichia coli 3431] Length = 297 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y ++ + + + Sbjct: 1 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 60 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 +++ + I I + R Sbjct: 61 LVAAGFVGAIVIASAYGWSIEQVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGSRDV 120 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 L + + + + ++ +++R + + A R ++ Sbjct: 121 ALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDL 180 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 K L F + +A +AG I+P F + + +LGG Sbjct: 181 KMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 239 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + S+ IL L + ++ F L LV+L+ Sbjct: 240 IGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLILVLLVMPT 286 Query: 338 SLLRL 342 +L Sbjct: 287 GILGR 291 >gi|121611724|ref|YP_999531.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121556364|gb|ABM60513.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 313 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 89/302 (29%), Gaps = 26/302 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ M A GL+++ G +G+++L Y +GAY L +G W + Sbjct: 36 LLNSVQYGLVLFMLAAGLTLIFGIMGVVNLAHGSFYMLGAYLAYALTGYFGSLAWAIAVG 95 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + L F L+ + + Sbjct: 96 AVLAMVFGLALEWLLFRHFHCRDHLDQVLLTFGLIYIFEDLRSILWGDAVHGVAIPEPLA 155 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + Y ++ ++ L+ + L + +T + R N Sbjct: 156 ASIPLTD----------ILSYPLYRLFICGICLALALGLYLLIAKTRLGMKIRAGASNPD 205 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L FA+ +AG A S I+ +V++GG+ Sbjct: 206 MAQALGVNTRLIHSIVFALGVTLAMVAGMAMAPVSSV--YPGMGSSVLIMCFVVVVIGGI 263 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + ++ V + L+ + + V+L + Sbjct: 264 GSVRGAFISALLVGLVDTFGKVL--------------LPQIAGMLVYMLMAAVLLYKPEG 309 Query: 339 LL 340 L Sbjct: 310 LF 311 >gi|288957399|ref|YP_003447740.1| branched-chain amino acid ABC transporter permease protein [Azospirillum sp. B510] gi|288909707|dbj|BAI71196.1| branched-chain amino acid ABC transporter permease protein [Azospirillum sp. B510] Length = 615 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 123/305 (40%), Gaps = 33/305 (10%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 Y + +++I +FA L +++G GL+S + +GAY +L G + L + Sbjct: 330 DYALILLTEVVILALFAASLHLLIGLGGLVSFGHAAWFGLGAYGSALLVKHLGAPMPLAL 389 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++G ++ G ++ G Y A+ TL ++I ++ +W +T G GI Sbjct: 390 AGAPLLAGIGALVAGWFCVRRSGLYFAMLTLAFAQIVWSVAFQWYAVTGGDNGILGV--- 446 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +PS + + Y++ L +C + ++ A R RD+ Sbjct: 447 ---------------WPSGWAAGKAAYYWLTLALCGGALWLLRRTAFAPFGYALRAGRDS 491 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 S+ + + AF ++ + G+AG +A ++ + P + +++ + +V++G Sbjct: 492 ALRAESVGIDVRRFQWMAFVLAGSAAGLAGGLYAFAKGSVFPSLLAVPQSVDALVMVLMG 551 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +++ + + ++ S + + + ++L Sbjct: 552 GLQTVAGPLAGAVAFHLLEAKVMSLTDWWRLS---------------LGLTIVALVLAFP 596 Query: 337 HSLLR 341 ++ Sbjct: 597 KGIVG 601 Score = 63.0 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 96/310 (30%), Gaps = 29/310 (9%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLI 96 S + + GL+IV G +++ Y +GAY+ L R+ W + Sbjct: 9 LSGLATAATLFLVSSGLTIVFGVTRIVNFAHGSFYMVGAYAGWSLIERFGGTPAGFWGSV 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +A+++G G +M + L+ + L+ + ++ G Sbjct: 69 AAAAVLTGVMGAVMEIGLLRRLYRSPELFQLLGTFGVVLVVQDLTAWIWGP--------- 119 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 R+ + ++ ++ + + L RT R + Sbjct: 120 -EDLLGRRAPGLKGSVDILDQPFPLYDLVLIGLGPLVLGLLWLLFNRTRWGTLVRAATQD 178 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + A G+ GA V+ + +G Sbjct: 179 REMASTLGVDPARLFTGVLVLGCALAGLGGALQVPREAVTLHMDMAIVVEAFVVVV--VG 236 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL+ A+ ++ + F ++ + + +V+++R Sbjct: 237 GMGSLTGAFLASLLIGQLQAFGI--------------LVFPQITLVIVFLFMAVVLVLRP 282 Query: 337 HSLLRLRTPS 346 H LL + Sbjct: 283 HGLLGRAEET 292 >gi|163731683|ref|ZP_02139130.1| inner-membrane translocator [Roseobacter litoralis Och 149] gi|161395137|gb|EDQ19459.1| inner-membrane translocator [Roseobacter litoralis Och 149] Length = 285 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 104/303 (34%), Gaps = 27/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +YV+ A GL+ V G LG+ G Y + +G + I V Sbjct: 8 IINGVAIGGVYVLIALGLTTVFGILGIAHFAHGSVSMFGGYLTFFFVTSWGFPLLFAILV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G+++ L + + + I I++ ++ G + + L Sbjct: 68 ALIVGLVLGVLIELLAYRPVRNANHINAFIVALGLTMMVEGLNLEFFGHEQVVIPTDLSR 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F V YV+L L ++ L++ +T A R + +N+ Sbjct: 128 V------------FNVGGVTIPELRLYVILAAALLIIAMTLFVEKTKTGQAIRAVAENRD 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + L FA+S+A AG + +++ILGG+ Sbjct: 176 AAILMGVNVNTIPLVVFAISTALGVCAGVMVGSLFAIAPGIGEGLVVKG--FAVLILGGL 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L L G + ++ F + + V+L R Sbjct: 234 GSIPGAVVGGLVLGITEALAAGFISSAYKDVIAF-------------VVMIGVLLFRPQG 280 Query: 339 LLR 341 L+ Sbjct: 281 LMG 283 >gi|300312237|ref|YP_003776329.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075022|gb|ADJ64421.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 293 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 116/305 (38%), Gaps = 26/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y +FA G ++V G LG+++L+ + +G+Y+ ++L + L +W+ + + Sbjct: 6 LINALSLGSVYALFALGFTLVFGVLGVINLSHGAIFMLGSYAALLLVEQMALPLWVALLL 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + +G G+I+ + + + + +I + ++ G Sbjct: 66 AMVATGLLGLIIDVLVLKPLRKRNAPHLIPMIATIGVAIMITNISQGLFGAENKRFP--- 122 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + I + +++ L ++ +R+T + A R I ++ Sbjct: 123 -------QGTIPEESVSLGNLHITAVQVAIIVIAFVLMVVLLGVMRKTQLGRALRAIAES 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 KA + L + L ++A G AG S + ISP M + + + +++ILG Sbjct: 176 PKAAYLLGINVEGLFLLTSFAAAALGGAAGVLVGVSFNAISPFMGQPMLHKGI-AVIILG 234 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM + L L F + F LFL++L++ Sbjct: 235 GMGDIRGAMIGGLFLGFAEVLTVAYISSDFRDAVAFG-------------LLFLILLVKP 281 Query: 337 HSLLR 341 + Sbjct: 282 SGMFG 286 >gi|163855964|ref|YP_001630262.1| branched-chain amino acid ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163259692|emb|CAP41993.1| branched-chain amino acid ABC transporter, permease protein [Bordetella petrii] Length = 320 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 92/312 (29%), Gaps = 35/312 (11%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 IY + GL+++ G + +++ +G Y P+ +S Sbjct: 23 GIYGLMCVGLAMIFGIMRVINFAQGDFMMLGMYITYFFFVLLAGHGMAGSPLGPYVSMVL 82 Query: 107 GMIMGLPSLKFRGDYL----------------AIATLIMSEIFQNILIKWKPITNGKAGI 150 + + L A LI++ +L + G Sbjct: 83 TLPVMYAVGYLAHRLLISRVTGGKSAALEGEGHYAQLILTLGIALVLQNGAMMVFGPELE 142 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + L + L V Y L ++ L + R+ + + Sbjct: 143 SIRTPLSSSAWEIGPL----WGDFVSVFVNKGRGYAALISVAAIVALALVVARSRLGKSL 198 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R DN A + + A AFA+ + +AG A + I++ Sbjct: 199 RAAADNPVAASYMGIDVDRAYRVAFALGTCITALAGGLLATNFPF--HPFVGLEFVIVMY 256 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + V+LGG+ S+ ++ V +L + + + + L Sbjct: 257 AGVVLGGIGSILGAFWGGMVIGLVQQLSSLVLPTQLQNAA-------------IFVFFLL 303 Query: 331 VILMRSHSLLRL 342 ++++R L Sbjct: 304 IVILRPQGLFGR 315 >gi|85704487|ref|ZP_01035589.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] gi|85670895|gb|EAQ25754.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] Length = 394 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 98/362 (27%), Gaps = 36/362 (9%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L + +L G + + L + A + +V G G+LSL + Sbjct: 26 LALFTLGVTVLSEGFGLAILSTSMVKILGMTLCLCLIAVAMDVVWGYCGILSLGHFAFFG 85 Query: 76 IGAYSYVILGSRYGLSIWLL-------------------------------IPVSAMISG 104 +G Y+ + ++ +P + Sbjct: 86 LGGYAVGMWLMYARTEGIVISSLSGAPIPPTQGEIENAIATQIFGVVGSNELPWLWGFAH 145 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 + + + + L L L + + A + Sbjct: 146 SLTLQLMMVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDTGLRGNN 205 Query: 165 SLIRFFRFPSSF----VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 L P ++ ++ L + WL + R IRDN+ Sbjct: 206 GLSGLQNIPGLDHLPQSTLSLWFFWASALALGLGYLLFAWLVSGKFGSVIRAIRDNEARV 265 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 L + KL F +++ +AGA + I+P +I + V +GG Sbjct: 266 RFLGYDVESYKLVIFTLTAVVSAIAGALYYPQAGIINPAEIAPIASIYLAVWVAIGGRGR 325 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L A++ G +L + ++ L+ + V L + Sbjct: 326 LYGAVIGAAVVSLASSWFTG-GGALNINLGIYTINWTDWWLVLLGLGFVAVTLFFPRGIG 384 Query: 341 RL 342 L Sbjct: 385 GL 386 >gi|148258849|ref|YP_001243434.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146411022|gb|ABQ39528.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 336 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 92/298 (30%), Gaps = 16/298 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAM 101 ++ + A GL++V G + +L+ A+GAY ++ + + Sbjct: 48 LAMGMMIFIMASGLTLVFGLMDVLNFGHGAFIAVGAYVATLVLLPLASWAQADSLLANLA 107 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + ++ + + L + ++ A + Sbjct: 108 VLVPAALLSMGVTAALGLVVERVLVLPVYGQHLKQILMTTGGLIVAEQTLYALFGPQIIP 167 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 F + + +L + +I L L RT I R +N++ Sbjct: 168 LPVPAALRGSFIIGDIAIAKYRLLAMLIGFAIFVAIELVLNRTKIGLLIRAGVENREMVE 227 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 +L I L F SA G+ G + R+++ ++V +VI+GG+ S+ Sbjct: 228 ALGYRIRRLFLGVFMTGSALAGLGGVMWGLYREQV-HASIGDELTVLVFIVVIIGGLGSI 286 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + ++ V + ++ + V++ R L Sbjct: 287 TGCFIGAILVAMVANYGGFL--------------VPKLALVSNILLMVAVLMWRPRGL 330 >gi|254699315|ref|ZP_05161143.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella suis bv. 5 str. 513] gi|261749758|ref|ZP_05993467.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261739511|gb|EEY27437.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] Length = 315 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 105/324 (32%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + LI A +I+ G G S + Y +G Sbjct: 6 ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I ++ L + + + + M++GLP L+ +G Y AI TL + ++ I Sbjct: 66 AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIVTLALPQVMAAIT 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + F Y L + ++ + Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ IR+N++ ++ K+ A +S AF MAGA A + Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ N+ +I + + GG ++ L V ++ Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 I + + +++ L Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292 >gi|67923798|ref|ZP_00517260.1| inner-membrane translocator [Crocosphaera watsonii WH 8501] gi|67854341|gb|EAM49638.1| inner-membrane translocator [Crocosphaera watsonii WH 8501] Length = 294 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 84/292 (28%), Gaps = 12/292 (4%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94 + + + + + + A GL++ G L L + +GAY +L S+ + Sbjct: 10 TAQNLFNGLAIGSVIALAAVGLTLTCGILRLSNFAHGDFMTLGAYLTWLLNSQGLNLVLS 69 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 I + A + L R TLI+ I + ++ + A D Sbjct: 70 AILGAGGTIFAMLVSEYLLWKPMRNRRATSTTLIIISIGLALFLRNGILMIWGANNQRYD 129 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 + + + + L L+RT I A R + Sbjct: 130 VPIIPAQ-----------EIFGLRLATDRIWAIALAVVAIVILHLVLQRTKIGKAMRAVA 178 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 DN + L + +++ + G I + + + + VI Sbjct: 179 DNIDLARVSGINVEQVVLWTWIITAILTTLGGVMLGLITSTI-RPNMGWFLILPMFASVI 237 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 LGG+ + ++ EL + + + I Sbjct: 238 LGGIGNPYGAIAGGLVIGVAQELSVPWLGTDYKLGVALLIMILILLIRPQGI 289 >gi|298292889|ref|YP_003694828.1| inner-membrane translocator [Starkeya novella DSM 506] gi|296929400|gb|ADH90209.1| inner-membrane translocator [Starkeya novella DSM 506] Length = 311 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 121/306 (39%), Gaps = 27/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYGLSIWLLIP 97 ++ + I + + + +V+ G +S + YA GAY+ L +R L +LIP Sbjct: 24 WTTVMLTIALAIGLSVLAIVVLLRAGQVSFGHGLYYATGAYTVAFLVKARLSLDALILIP 83 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + +++ + G ++++R + A+ L +S + ++L K IT G G+ VA Sbjct: 84 LGGLVAMLIAVAFGFFAVRYRDIFFAMINLAISMVAFSLLEKLYHITGGGDGMNVARP-- 141 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 +E +M+Y L + L+ ++ + + A ++ N+ Sbjct: 142 ----------TLGGGRLDRAAFEAWMFYATLAIAALAGLLVTRYLASPLGRALEAVKSNE 191 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 L + A+A+S+A G++GA A ++P+ + + + I ILGG Sbjct: 192 MRLEYLGVSGNHVLHVAYAISAALAGVSGAIIAIVNGHVAPEFAYWVRSGEFVFIAILGG 251 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 ++ + + + + T + ++L +I+ Sbjct: 252 AGNVLGAFAGSMVFEAIRNHAAALA--------------ADYWQTTLGLSLIAIIMFAPD 297 Query: 338 SLLRLR 343 L +LR Sbjct: 298 GLTQLR 303 >gi|254706442|ref|ZP_05168270.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella pinnipedialis M163/99/10] gi|254711270|ref|ZP_05173081.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella pinnipedialis B2/94] gi|254711871|ref|ZP_05173682.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella ceti M644/93/1] gi|254714940|ref|ZP_05176751.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella ceti M13/05/1] gi|256030101|ref|ZP_05443715.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella pinnipedialis M292/94/1] gi|256158272|ref|ZP_05456181.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella ceti M490/95/1] gi|256252787|ref|ZP_05458323.1| high-affinity branched-chain amino acid transporter membrane protein [Brucella ceti B1/94] gi|261216632|ref|ZP_05930913.1| inner-membrane translocator [Brucella ceti M13/05/1] gi|261219867|ref|ZP_05934148.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261313893|ref|ZP_05953090.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261318866|ref|ZP_05958063.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261319501|ref|ZP_05958698.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|265987129|ref|ZP_06099686.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265996791|ref|ZP_06109348.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|260918451|gb|EEX85104.1| conserved hypothetical protein [Brucella ceti B1/94] gi|260921721|gb|EEX88289.1| inner-membrane translocator [Brucella ceti M13/05/1] gi|261292191|gb|EEX95687.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261298089|gb|EEY01586.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261302919|gb|EEY06416.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|262551088|gb|EEZ07249.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264659326|gb|EEZ29587.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 310 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + LI A +I+ G G S + Y +G Sbjct: 6 ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I ++ L + + + + M++GLP L+ +G Y AIATL + ++ I Sbjct: 66 AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + F Y L + ++ + Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ IR+N++ ++ K+ A +S AF MAGA A + Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ N+ +I + + GG ++ L V ++ Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 I + + +++ L Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292 >gi|229826661|ref|ZP_04452730.1| hypothetical protein GCWU000182_02037 [Abiotrophia defectiva ATCC 49176] gi|229789531|gb|EEP25645.1| hypothetical protein GCWU000182_02037 [Abiotrophia defectiva ATCC 49176] Length = 549 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 31/317 (9%), Positives = 85/317 (26%), Gaps = 12/317 (3%) Query: 15 LCLLAVVYPLLLFLFLGA---TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + L+ + ++ + G + + ++ Q + A G++ ++ G L+ Sbjct: 227 IILIFIGLSIITPMLKGPQTHLLTYNNVLNVLQQASPKMFLALGVAGLILLTG-TDLSIG 285 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +G I+ + + + A ++ + L ++ Sbjct: 286 RMIGMGMTVATIIMHQGVNTG--QVFGHAFDFTGLPVVARVVLALVVCIILCTFFTSIAG 343 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F I+ + + + V P + ++L Sbjct: 344 FFTAKFKMHPFISTMANMLVIFGLATYATKGVSFGAIESNIPDIIIPKLNGFPTIILWAV 403 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 A + +T + N +A + ++ L AF ++ G A Sbjct: 404 AAIAVVWFIWNKTPFGKNLYAVGGNPEAASASGISVFAVTLGAFILAGILYGFGAWLECA 463 Query: 252 SRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYY 305 + + I+ ++ GG+ +S + I + + Sbjct: 464 RMVGSGSAAYGQGWEMDAIAACVVGGISFTGGIGKISGVVVGVLIFTALTYSLTILGIDT 523 Query: 306 FNSLLKFDCSFNMRHTT 322 + + T Sbjct: 524 NLQFVFEGIIILVAVTL 540 >gi|146343654|ref|YP_001208702.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146196460|emb|CAL80487.1| Putative branched-chain amino acid ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 308 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 91/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + + + + L P + Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNAFQNFLPSLFPGYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + + + +L W + +G Sbjct: 82 AMALAFVASGSLGMLVEWA--MIRRLYKRPLDTLLATWGLSLILQQAYRSVFGAREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + I +V+ ++ + L + R + N+ + Sbjct: 140 LPEWMMGSWQATDSIQIPINGMFVMCLTILITIVVAYVLFLSRWGRQVRAVVQNRVMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + G+AG+ F + + +V+ GG SL Sbjct: 200 VGINTEKVDRYTFGLGCGIAGVAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAASLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ ++++R L L Sbjct: 258 GTIASAFTISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMLRPQGLFAL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|260433715|ref|ZP_05787686.1| branched-chain amino acid ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417543|gb|EEX10802.1| branched-chain amino acid ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] Length = 336 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 85/312 (27%), Gaps = 19/312 (6%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---------LLIPVS 99 + A G++++ G L + A GA V++ + L +P + Sbjct: 25 LALGALGVTLIYGILRFSNFAHGDTMAFGAMIAVLVTWGLQAAGITFGPLPTALLALPFA 84 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + A +I +F D A +++ + I + Sbjct: 85 ILGCIALVLITDRLVYRFYRDQKAKPVILVIVSMGVMFIMNGLVRFIIGPDDQRFSDGAR 144 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + ++ A + +L +T + R DN+ Sbjct: 145 FVISARDFKALTGLDEGLAIKTSQGITVIVAIVAVALLFWFLNKTRTGKSMRAYSDNEDL 204 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + + +A AG + + F + + + I+GG+ Sbjct: 205 ALLSGINPERVVMITWIIVAALATTAGVLYGLDKSF--KPFVYFQLLLPIFASAIVGGLG 262 Query: 280 SLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 + I+ + + + + L +V Sbjct: 263 NPIGAIAGGFIIAFSEVTITYAWKKVLVYLLPDSLEPSGLVQLLSTDYKFAVSFVILLIV 322 Query: 332 ILMRSHSLLRLR 343 +L + L + + Sbjct: 323 LLFKPTGLFQGK 334 >gi|222099341|ref|YP_002533909.1| Monosaccharide-transporting ATPase [Thermotoga neapolitana DSM 4359] gi|221571731|gb|ACM22543.1| Monosaccharide-transporting ATPase [Thermotoga neapolitana DSM 4359] Length = 338 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 94/316 (29%), Gaps = 28/316 (8%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 ++ + + ++ Q+ + ++ A ++V+ S G + L+ A+G + Sbjct: 36 IVFSVLSPYFFTISNWLNILRQVSVLLILASAQTMVIISAG-IDLSVGAILALGGCLAAV 94 Query: 84 LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 S +G + L + ++ G G K R ATL M + + + Sbjct: 95 AMSYWGWNFLLGSLLGVAVATLVGFFNGSIITKGRIPDFI-ATLGMLGAVRGVALLITG- 152 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 T + L + L R Sbjct: 153 --------GLPVPSHFTATALKGYLPEALIWLGSGDIGPVPVPALVALIMVLITWFVLSR 204 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 T + + + N++A + K + +S + G+AG + + M + Sbjct: 205 TCLGRSIYAVGGNREAARESGINVDKVKTIVYTLSGLYAGIAGLVMVGRMNSANALMAEG 264 Query: 264 SENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 E + ++VI GG S+ ++ + ++ Sbjct: 265 IELNTIAAVVIGGTNLFGGEGSVLGTLIGALLIGVLSNGLNLLD------------VEPF 312 Query: 319 RHTTLMVIALFLVILM 334 + + + ++++ Sbjct: 313 WQKVINGLLIIIIVVF 328 >gi|114765330|ref|ZP_01444447.1| branched-chain amino acid ABC transporter, permease protein [Pelagibaca bermudensis HTCC2601] gi|114542310|gb|EAU45339.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. HTCC2601] Length = 336 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 36/334 (10%), Positives = 87/334 (26%), Gaps = 19/334 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 FL + + A G++++ G L + AIG +++ Sbjct: 3 FLNALVALANFVFIPAIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAIGTMFTILVTW 62 Query: 87 RYG---------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + L IP +++ + +F + A +++ + Sbjct: 63 GLQALGVSFGPLPTALLAIPFGIVLTSLLVLGTDRLVYRFYREQKAKPVILVIVSMGVMF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + + ++ + A + Sbjct: 123 IYNGLTRLIIGPGDQNFADGERFLISARDFKTMTGLDEGLALKSTQAITVVVAILVVALL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L T + R DN+ + + + +A +AG + + Sbjct: 183 FWFLNHTRTGKSMRAYSDNEDLALLSGINPERVVMVTWIIVAALAVVAGTLYGLDKSF-- 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309 F + + + I+GG+ S I+ + M Sbjct: 241 KPFTYFQILLPIFASAIVGGLGSPLGAIAGGFIIAFSEVGITYAWKKVLTYMLPESLEPS 300 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L +V+L R L + + Sbjct: 301 GLVQLLSTDYKFAVSFVILIIVLLFRPTGLFKGK 334 >gi|222035163|emb|CAP77908.1| High-affinity branched-chain amino acid transport [Escherichia coli LF82] gi|312948010|gb|ADR28837.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli O83:H1 str. NRG 857C] Length = 308 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y I +Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFMIIAALMMLGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|325523310|gb|EGD01664.1| inner-membrane translocator [Burkholderia sp. TJI49] Length = 345 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 97/326 (29%), Gaps = 18/326 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 S F + + ++ + + ++ + + A + V+ Sbjct: 25 SRFFNPAARQKLLAFASLMLLIVFFSFASSNFLEVDNLVAILQATAVNGVLAVACTYVII 84 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + G + L+ A ++ + +G+ + L I + + G + G K + Sbjct: 85 TSG-IDLSVGTLMTFCAVMAGVVLTNWGMPLPLGILAALLFGALSGCVSGFVIAKMKVPP 143 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + G + + R + T +I + Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGNLIPAL 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +L + ++ + L RT + N++A + K++ + S Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGTV 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296 G+AG A+ + P + + E + ++VI GG S+ I+ + Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322 M+ + + Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337 >gi|207722108|ref|YP_002252546.1| transmembrane protein [Ralstonia solanacearum MolK2] gi|207744837|ref|YP_002261229.1| transmembrane protein [Ralstonia solanacearum IPO1609] gi|206587282|emb|CAQ17866.1| transmembrane protein [Ralstonia solanacearum MolK2] gi|206596247|emb|CAQ63174.1| transmembrane protein [Ralstonia solanacearum IPO1609] Length = 301 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 108/315 (34%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y M + GL+++ G L +++ + +GA + S Sbjct: 10 IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 69 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 L W+++ + + GA GM++ L+F + L+++ ++ G Sbjct: 70 YLDLPYWVMLVAAPLAIGAVGMVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAIYG 129 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G+ + G T F++ + +V++ + + + +T + Sbjct: 130 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVVASLTVCFATWFLIEKTKL 179 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + + Sbjct: 180 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 237 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ L + L + +T++ + Sbjct: 238 ITVFAVVVIGGMGSILGSIITGLGLGVIEGLTKVF--------------YPQASSTVVFV 283 Query: 327 ALFLVILMRSHSLLR 341 + LV+L+R L Sbjct: 284 IMALVLLVRPAGLFG 298 >gi|192292930|ref|YP_001993535.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] gi|192286679|gb|ACF03060.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 433 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 113/328 (34%), Gaps = 32/328 (9%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + L+ L L + + + I ++FA +I++G G+LS + Y +G Sbjct: 24 LWIATALVLLLLPKLFASGGSLTTFSLVGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83 Query: 79 Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 + ++ +++ + + + + ++G + G A+ +L ++E+ Sbjct: 84 FLAIHTINILGFNKWPIPLPFVPLIGGFAGLFFAALIGWVMTQRSGTAFAMISLGLAELV 143 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + + G+AGI + + F+ +I +YY++ + Sbjct: 144 ASSALILRSFFGGEAGIS------------ANRTKLFKVFGLSFGPQIQIYYLVAAWTLI 191 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 + + L RT + +RDN + + + AF S F G+AGA A + Sbjct: 192 AIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFSGFFAGIAGALAAINF 251 Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + + ++ V+ +GG+ + + + + Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTVLSLVLSDL------------ 299 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341 + +V+L + Sbjct: 300 ---TQVWQLYFGLFFIIVVLFAPGGITG 324 >gi|86609532|ref|YP_478294.1| hydrophobic amino acid ABC transporter permease [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558074|gb|ABD03031.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 289 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 95/299 (31%), Gaps = 28/299 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY + A G+S+ G L + +GAY + + G I + + +A+ Sbjct: 12 LVLGSIYALGAIGVSLTFGILRFANFAHGDLMTLGAY-FGLTFVGLGWPIGVSLLPAALA 70 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + C + + + + LI S IL I G + Sbjct: 71 TVLCAVGIDQLIYRRLRREAPVILLISSFGTALILRSLVQIIWGPNNQVYRSGIQLP--- 127 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + +L G L ++ L+L+RT + A R + DN + Sbjct: 128 ---------WRLGELRIKPDWAVILAGTALLVVALHLFLQRTRVGKAMRAMADNFELAKI 178 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L +A+ +A AG F + + + + ILGG+ Sbjct: 179 TGIDTERIVLWTWAIGAALACAAGVFLGMDTRL--HPTMGWRLLLPIFAAAILGGIGRPY 236 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ E + + + + F L L+++ R LL Sbjct: 237 GAIAGGVVIGLAEEFSTLVINPAYKTGVAF-------------AILVLLLIFRPTGLLG 282 >gi|56709082|ref|YP_165127.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56680767|gb|AAV97432.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 326 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 131/336 (38%), Gaps = 20/336 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + I + + + + + + + + + G+ + +G ++ Sbjct: 4 FSSKQLIGTGIFLFAIFIGVPLVIGATGRWDFYFTLTSVALLAIASAGVWLTF-YIGRIN 62 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + IGAY IL + G S W+ +P + + + +++GLP L+ RG Y A+ TL Sbjct: 63 IGQGAFALIGAYVSAILVVKAGWSFWITLPAAGLFAAIVAILVGLPILRLRGVYFAMITL 122 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +++++ + ITNG GI L LI F + ++ Y Sbjct: 123 VLTQVVTLTALALP-ITNGAKGISNIPLPSGLSILGIPLIPDFGAMEN---TKLAFYLTA 178 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + + + L + + + R+++ N++ S+ I + ++ FA+SS F G+ GA Sbjct: 179 CILMVATYAALYRLVNSRLGHLCRSMQQNEELASSIGVNIAYIRIVIFAISSFFGGIGGA 238 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F A + P F ++++ + LGG+ + T +L +L Sbjct: 239 MFGAIAQSVYPSTFVVADSVNFMLNCFLGGLGYVFGPMLGTLVLYFGWDLL--------- 289 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L VI + LL +R Sbjct: 290 ------FEIGKYQMLVYSMILIAVIRFLPNGLLSVR 319 >gi|78064745|ref|YP_367514.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77965490|gb|ABB06870.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia sp. 383] Length = 294 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W ++ ++ ++ GA G+++ L++ + L+++ ++ G Sbjct: 63 YFGLPYWAMLVIAPLVVGAFGILIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + +V+L R L Sbjct: 277 IMAIVLLFRPAGLFG 291 >gi|119386635|ref|YP_917690.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119377230|gb|ABL71994.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Paracoccus denitrificans PD1222] Length = 446 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 103/284 (36%), Gaps = 20/284 (7%) Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + G + L PV A+ + A +G +L R DYLAIATL + EI ++ Sbjct: 163 ARAGNIGGLGWPVLLSWPVGALFAAAAAWGVGKVALGLRSDYLAIATLGIGEIIVAVMRN 222 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + ++ G + R ++S F + + + + + + + + Sbjct: 223 EEWLSRGVKNVSGIPRPVPYELELQSSPDFVARAAEWGLSPAVASGIWVKLLYAGLFGAV 282 Query: 200 WLR---------RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L ++ R IRDN+ A ++ + L F + SA IG+AGA Sbjct: 283 LLGLILLAELALKSPWGRMMRAIRDNETAAEAMGKDVTRRHLQIFVIGSAVIGLAGAMMV 342 Query: 251 ASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGV--------VELCCGM 301 +SP+ F ++ +VI+GG + A ++ + E + Sbjct: 343 TLDGLLSPNSFNPLRYTFLIWVMVIVGGSGNNWGAALGAILIWFLWIKAEVWGPEFMRLV 402 Query: 302 NFYYFNSLLKFDCSFNMRHTTLM--VIALFLVILMRSHSLLRLR 343 L+ + H + + L L++ L+ + Sbjct: 403 TGPLPAGALRDHLLGSAPHMRFIALGVVLLLMLRFAPRGLVPEK 446 Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + S ++ LI + A G+++ G GL + V A+G + V++ + Sbjct: 37 FSGSWNTALAILNMGLISAVMALGVNMQWGYAGLFNAGVVGFLALGGLAPVLVSTAPVQG 96 Query: 92 IWLLIPVSAMIS 103 W +++ Sbjct: 97 AWAAGGPRVILA 108 >gi|323700226|ref|ZP_08112138.1| inner-membrane translocator [Desulfovibrio sp. ND132] gi|323460158|gb|EGB16023.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132] Length = 303 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 89/290 (30%), Gaps = 1/290 (0%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + I + Y + A G ++V G L L++ + +GAY + L Sbjct: 6 QNIINALQWGSFYALIALGYTLVYGVLRLINFAHGDIFMVGAYIAFFVAGFLLGPAIGLS 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P + + + + + +A L + ++ + L Sbjct: 66 PFATFLLAVPLTMFLTACVGVTLERIAYRPLRRKGAHRLYVVITALMCGLILEYSNLAVL 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 L++ + V V+ + + + +T I A R I + Sbjct: 126 GASRLKFPELVQKSVWNLGGVTVTNLKVIVIFAAIAVFIILNFIVTKTKIGMAMRGISYD 185 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + I + F + S F G+AG FA S + P M I+ V+ G Sbjct: 186 KFAIPLMGIPIDQIIVFTFILGSGFAGLAGLLFAMSYPVLEPFMGMLIGWKAFIAAVV-G 244 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 G+ + +L + + + L F + + Sbjct: 245 GIGDIRGAFYGGFLLGFIEVGVVTVFPSTYRDLFAFTILLIILWMKPTGL 294 >gi|312141044|ref|YP_004008380.1| branched-chain amino acid ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311890383|emb|CBH49701.1| putative branched-chain amino acid ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 766 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 84/292 (28%), Gaps = 8/292 (2%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + +Y + A GL + + G+ + +GA+ Y + L L + Sbjct: 6 TFTILGLVLGSVYAIAASGLVLTYNTSGIFNFAHGAQAMLGAFLYWQFRYGWDLPTPLAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ ++G P + L + L + I++ + G + + Sbjct: 66 LLTIGVAG--------PLMGLLLYALIMRGLRDTAEVTKIVVTVSILLGGVSLSHWFWHP 117 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 T RF + L+ ++ + RT + + R + D+ Sbjct: 118 EEPRTVKMFFGDESRFSFFGATVHMHEVICLVAAVLIAVGLRFLFTRTRLGVSMRGVVDD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++A+ S +AG I + + G Sbjct: 178 PDLLRLNGHNPERIAAFSWALGSTLAVVAGILITPISGGTLEANLLTLLVIDAFAAAMFG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 + S+ + +L G + S M +++I L Sbjct: 238 RLRSIPRTFVGAIVLGLAGTYVLGYFPSEWTWTSNLRVSLPMIALFVVLIVL 289 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 110/286 (38%), Gaps = 10/286 (3%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 +A LL+ +++ + + + + + A L+++ G G ++L V AI Sbjct: 313 AVAWGAALLVIVYMIRLLMVESAITTLTLGMSFAIIALSLTLLTGYAGEMNLAVVSFGAI 372 Query: 77 GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132 G+ + + +++ G ++ LP+L+ RG YLA+AT+ Sbjct: 373 STIVAYHFGTSGSGLATRLTLWGLIIGTLVAAVIGGLVALPALRLRGLYLALATMAFGVF 432 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 N++++ + + L T I + + + + + Sbjct: 433 LSNMVLR------DTTEHELFGVKFSLFTGGSLSIPPLKVGPLDLSNQTAFLMTVTAIFT 486 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + A ++ LR + ++D+ A L ++ KLS F +S+ G+ G +++ Sbjct: 487 ILAIGVVALRNSGYGRRLAAMKDSPAAAAMLGQNLVKLKLSVFMLSAGIAGLGGILMSSA 546 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 +S + F ++ V+ + ++ G+ ++ + + Sbjct: 547 IGAVSNENFSIMISLTVLMLTVVAGIGYVTGALFGGLMAGVGFAVI 592 >gi|113953040|ref|YP_732057.1| ABC transporter permease [Synechococcus sp. CC9311] gi|113880391|gb|ABI45349.1| ABC transporter permease protein [Synechococcus sp. CC9311] Length = 400 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 97/348 (27%), Gaps = 32/348 (9%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + + V ++ + + + ++ + L + A G+ ++ G GLLSL Sbjct: 31 QRPWLFVTVWVLIIAAIVAAPSVLPVFRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQG 90 Query: 72 IAYAIGAYSYVILGS------------------RYGLSIWLLIPVSAMISGACGMIMGLP 113 I +A+G Y+ + P + + + + Sbjct: 91 IFFALGGYAAAMYLQLRSSIDMPNSIPEFFSLYGVDRLPLFWEPFRSPLFTLVAIWLIPA 150 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L L I F + + G + F + Sbjct: 151 LLAGVLGNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTVLFGQLE 210 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 + +++ + L + W+ R N IRD++ K Sbjct: 211 LGSPEMQRGFFWLTAVIVILVWIFLRWVVRGRFGNVLIAIRDDEPRLRFTGYNPTLFKTI 270 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 FA++ G+ GA + +SP +I ++ V +GG +L + ++ Sbjct: 271 VFAIAGGLAGIGGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLVGAILGSVSIMY 330 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L + + LV+ ++ Sbjct: 331 AKSLVSE--------------ALPETWLFIQGGLFILVVTALPEGVIG 364 >gi|317968283|ref|ZP_07969673.1| putative membrane protein of ABC transport system [Synechococcus sp. CB0205] Length = 375 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 93/341 (27%), Gaps = 31/341 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + ++ + + ++ + L + A G+ ++ G GLLSL I +A+G Sbjct: 13 LLLWVVIIAAIVAAPAVLPVFRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQGIFFALG 72 Query: 78 AYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 Y+ + A + P +L A L Sbjct: 73 GYAAAMYLQLNSSAGFPNGIPEFFGLYGVKQLPAFWVPFHSPLFTLVAIWLIPAVLAAVL 132 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTV-----------RSLIRFFRFPSSFVIYE 180 + K + + + + F + Sbjct: 133 GNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSPEMQ 192 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 ++ M + +++ W+ R + IRD++ K FA++ Sbjct: 193 RGFFWFTALMVIAAWAVVRWVVRGRFGDVLIAIRDDEPRLRFAGFNPTLFKTIVFAIAGG 252 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+ GA + +SP +I ++ V +GG +L + L Sbjct: 253 LAGIGGALYTVQSGIVSPQYMTVPFSIEMVIWVAVGGRGTLVGAILGAVAINYAKSLVSE 312 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+ ++ Sbjct: 313 --------------AMPQSWLFIQGGLFILVVTALPEGVIG 339 >gi|225628479|ref|ZP_03786513.1| high-affinity branched-chain amino acid transport system permease protein LIVM [Brucella ceti str. Cudo] gi|260166848|ref|ZP_05753659.1| high-affinity branched-chain amino acid transport system permease protein [Brucella sp. F5/99] gi|261756227|ref|ZP_05999936.1| bacterial inner-membrane translocator [Brucella sp. F5/99] gi|225616325|gb|EEH13373.1| high-affinity branched-chain amino acid transport system permease protein LIVM [Brucella ceti str. Cudo] gi|261736211|gb|EEY24207.1| bacterial inner-membrane translocator [Brucella sp. F5/99] Length = 310 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + LI A +I+ G G S + Y +G Sbjct: 6 ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I ++ L + + + + M++GLP L+ +G Y AIATL + ++ I Sbjct: 66 AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + F Y L + ++ + Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ IR+N++ ++ K+ A +S AF MAGA A + Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ N+ +I + + GG ++ L V ++ Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 I + + +++ L Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292 >gi|221200394|ref|ZP_03573436.1| inner-membrane translocator [Burkholderia multivorans CGD2M] gi|221206074|ref|ZP_03579088.1| inner-membrane translocator [Burkholderia multivorans CGD2] gi|221174086|gb|EEE06519.1| inner-membrane translocator [Burkholderia multivorans CGD2] gi|221179735|gb|EEE12140.1| inner-membrane translocator [Burkholderia multivorans CGD2M] Length = 345 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 96/319 (30%), Gaps = 18/319 (5%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + V+ + + ++ + + A + V+ + G + L Sbjct: 32 TRQRLLAFASLVLLIVFFGAASPNFLEVDNLVAILQATAVNGVLAVACTYVIITSG-IDL 90 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + A ++ + +G+ + L I + G + G K + Sbjct: 91 SVGTLMTFCAVMAGVVLTNWGMPLPLGIAAALGFGALSGCVSGFVIAKMKVPPFIAT--- 147 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + + G + + R + T ++ + + +L Sbjct: 148 ---------LGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQDSLIGHLVPALPIPNAVL 198 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + ++ + L RT + N++A + K++ + S A G+AG Sbjct: 199 ILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAVCGIAGLL 258 Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303 A+ + P + + E + ++VI GG S++ I+ + M+ Sbjct: 259 IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIAGTIIGAFIMSVLTNGLRIMSV 318 Query: 304 YYFNSLLKFDCSFNMRHTT 322 + + Sbjct: 319 AQEWQTVVTGVIIILAVYV 337 >gi|170755664|ref|YP_001780109.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum B1 str. Okra] gi|169120876|gb|ACA44712.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Clostridium botulinum B1 str. Okra] Length = 290 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 106/304 (34%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G +++ G L +L+ G + + + S + + + L I + Sbjct: 6 LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFIFFTMISIFKIPLILAIIL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I+G G+++ L + K A+A L+ S +L + G Sbjct: 66 TIVITGLIGVLLYLIAYKPVLKGDAMAPLLSSLGVSIMLEALGQLIWGTE---------- 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + + + ++ L L + ++ ++ I R + N+K Sbjct: 116 -IIPFPINIPKGIYSIASIKLSNIQIFIFLFSITLMIILYKFIMKSNIGLQIRALSYNRK 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F++++ ++G + D + M I + ILGG+ Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ IL L + + F I L LV++++ + Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280 Query: 339 LLRL 342 + Sbjct: 281 IFGE 284 >gi|163758221|ref|ZP_02165309.1| inner-membrane translocator [Hoeflea phototrophica DFL-43] gi|162284510|gb|EDQ34793.1| inner-membrane translocator [Hoeflea phototrophica DFL-43] Length = 300 Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 96/302 (31%), Gaps = 17/302 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + I + + GL++V G L +L++ YAIGAY+ + Y P Sbjct: 8 LVDGLIYAGWLFIVSVGLTLVFGVLNILNIAHGSLYAIGAYAAASMVGAYFALGGEAFPY 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ ++ L + + + N+L+ + + + + Sbjct: 68 GSYVAMILAAVLVALVLGPLLERGLLRFFYGRDEVLNVLVTYAVFLILEDVMKLIWG-VN 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + Y + + V+ + ++ L L RT + + + + Sbjct: 127 PYFVYEPYTLLGDVEIGPLFYVGYDFAVIAAAIIVGLAVWLTLNRTRVGKVVLAVIHDSE 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ + L AF + + GA A + I+ ++VI+GG+ Sbjct: 187 MSQTMGVNVQRIYLGAFMAGTFLAALGGALTAPMISV--TPGLGVNVIIVAFAVVIIGGL 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A ++ + ++ + +V+L R Sbjct: 245 GSVPGAAIGALMVGISRAASVHL--------------LPEAELFIIYFVMAIVLLFRPEG 290 Query: 339 LL 340 L Sbjct: 291 LF 292 >gi|315645857|ref|ZP_07898978.1| urea ABC transporter, permease protein UrtB [Paenibacillus vortex V453] gi|315278618|gb|EFU41932.1| urea ABC transporter, permease protein UrtB [Paenibacillus vortex V453] Length = 301 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 87/290 (30%), Gaps = 16/290 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 + G + ++++ IGAYS + + + + I+ + + + Sbjct: 27 VTFGLMNVINMAHGELIMIGAYSTYVTQGLFTAYMPKSWFDTYFIAALLVSFVVAALIGW 86 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + I L ++L W + + T S + +S + Sbjct: 87 LLEMILIRHL-YGRPLDSLLATWGVGMMLQQIARFIFGAPNVAVTSPSWLNGGLAITSNI 145 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++++ + + ++ L++ RT R + N+ L + FA+ Sbjct: 146 VLPYKRLFIIVLVALVVTAMYLYIYRTVQGRRMRAVMQNRNMAGCLGISTRRVDGLTFAI 205 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG + +V+LGG+ L + L Sbjct: 206 GSGIAGIAGCALTLLGPI--GPSIGTYYIVDAFMVVVLGGVGKLIGTVAGALGIGMFNTL 263 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L+ + + + L+ LRT S Sbjct: 264 FETYTSASIGK-------------VLVFALIVAFLQWKPRGLVALRTRSL 300 >gi|222106922|ref|YP_002547713.1| ABC transporter membrane spanning protein (sugar) [Agrobacterium vitis S4] gi|221738101|gb|ACM38997.1| ABC transporter membrane spanning protein (sugar) [Agrobacterium vitis S4] Length = 360 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 92/313 (29%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + G S + + Q+ I + ++++ + G + L+ Sbjct: 52 LIVLILSLIAFGVILGGKFFSPFALTLILQQVAITGIIGAAQTLIILTAG-IDLSVGAIM 110 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + YG+ L + + G CG I G+ + + Sbjct: 111 VLSSVVMGQFAVHYGVPGPLAVLCGFAVGGICGFINGVLVARVKLPPF------------ 158 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + I +Y + + F SF + + Y ++ + L Sbjct: 159 IVTLGMWQIVLAANFLYSGNETIRSQDLGTNAPILQYFGQSFKLGGAVLTYGVISLALLV 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + L TA + D+ A + +S + ++ + G Sbjct: 219 AVLWYVLNNTAWGRHLYAVGDDPDAAELSGVNVKRMLISVYTLAGLICALGGWAMIGRIG 278 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP +F+ + ++VI GG S+ + I+ + Sbjct: 279 SVSPTAGQFANIESITAVVIGGMSLFGGRGSIMGMLFGALIVGVFQLGLRMAGTDPQWTY 338 Query: 310 LKFDCSFNMRHTT 322 + Sbjct: 339 MLIGVLIIAAVAI 351 >gi|187918893|ref|YP_001887924.1| monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN] gi|187717331|gb|ACD18554.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN] Length = 341 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 100/321 (31%), Gaps = 22/321 (6%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 L K L+ ++ A + + + + A + V+ G Sbjct: 26 PTALQKLLAFGSLILLLVFF--SFASPAFMQMDNMLGILQATAVNGVLAIACTFVI-ITG 82 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 + L+ A + + + L +W + + CG + G + K + Sbjct: 83 GIDLSVGTLMTFTAVICGVFLTYWHLPMWTGVLAAIGTGAICGTVSGTLTAKMKIPPFIA 142 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 + + G + + AD+ + T + ++ + + Sbjct: 143 T------------LGMMMLLKGLSLVVSADKPIYFTDTENFYMISQDSLIGDLLPSLPVP 190 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 +L + FL+ + L RTA+ + N++A + K++ + +S A G+ Sbjct: 191 NAVLILFFLAVVSSITLNRTALGRYTFALGSNEEAVRLSGVNVDRWKIAIYGLSGAICGI 250 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELC 298 AG A+ + + I+ V++ GG ++ I+ + Sbjct: 251 AGLLIASRLNSAQ-PALGQGYELEAIAAVVIGGTSLSGGAGTILGTIIGAFIMSVLTNGL 309 Query: 299 CGMNFYYFNSLLKFDCSFNMR 319 M+ ++ + Sbjct: 310 RIMSVAQEWQIVVTGLIIILA 330 >gi|161520149|ref|YP_001583576.1| monosaccharide-transporting ATPase [Burkholderia multivorans ATCC 17616] gi|189353672|ref|YP_001949299.1| simple sugar transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160344199|gb|ABX17284.1| Monosaccharide-transporting ATPase [Burkholderia multivorans ATCC 17616] gi|189337694|dbj|BAG46763.1| simple sugar transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 345 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 95/319 (29%), Gaps = 18/319 (5%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + V+ + + ++ + + A + V+ + G + L Sbjct: 32 TRQRLLAFASLVLLIVFFGAASPNFLEVDNLVAILQATAVNGVLAVACTYVIITSG-IDL 90 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + A ++ + +G+ + L I + G + G K + Sbjct: 91 SVGTLMTFCAVMAGVVLTNWGMPLPLGIAAALGFGALSGCVSGFVIAKMKVPPFIAT--- 147 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + + G + + R + T ++ + + +L Sbjct: 148 ---------LGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQDSLIGHLVPALPIPNAVL 198 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + ++ + L RT + N++A + K++ + S A G+AG Sbjct: 199 ILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAVCGIAGLL 258 Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303 A+ + P + + E + ++VI GG S+ I+ + M+ Sbjct: 259 IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTNGLRIMSV 318 Query: 304 YYFNSLLKFDCSFNMRHTT 322 + + Sbjct: 319 AQEWQTVVTGVIIILAVYV 337 >gi|331017300|gb|EGH97356.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 305 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 92/303 (30%), Gaps = 17/303 (5%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + ++ A GL+I+ G +G++++ +GAY+ +L + + + P Sbjct: 17 NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTYVLSTLVQTYMPSMQPYYF 76 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + A ++ + + + +L W + + + Sbjct: 77 FFAIALSFVVAGSIGWVVER--VMISRLYHRPLDTLLATWGLSLVMQQALRSIFGAREVS 134 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + S + +V+ L+ I L L RT R N+ Sbjct: 135 ANPPEWLMGAVSLSDTIEIPRNGLFVMALTVLLTGGIFLMLYRTRWGLHVRATVQNRVMS 194 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ FA+ G+AG A + + + +V+ GG S Sbjct: 195 RAVGINTREVDRMTFALGCGVAGVAGV--AFTTIGSTGPTAGSLYIVDTFLVVVFGGAQS 252 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L + + + +L A+ L++LMR L Sbjct: 253 LLGTIASAFTIAQTQSIAEFFMSGSMAKVLTLS-------------AVILILLMRPQGLF 299 Query: 341 RLR 343 + Sbjct: 300 SSK 302 >gi|317402586|gb|EFV83148.1| ABC transporter [Achromobacter xylosoxidans C54] Length = 288 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 117/300 (39%), Gaps = 41/300 (13%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ + + + A + + + G+L++ IGAY+ +L Y +S + + Sbjct: 13 NLVLTLGTNALLALSIWLTLA-CGMLAMANAAFMGIGAYAAALLTMNYDVSFPVALAGGM 71 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++GLP+L+ G YLA+ATL E+ + ++ + IT G G+ +L Sbjct: 72 AAPALVAALIGLPTLRLSGVYLAMATLGFGEVVRVTVLNTESITGGALGLNGIPQLTQWW 131 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 ++ + ++ +R + I A+ IR ++ A Sbjct: 132 H-------------------------VILAVVIVLFVLWRVRASKIGRAFEAIRGDETAA 166 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + K+ AF + G+AGA A I P+ + F + ++++ ILGG+ Sbjct: 167 GLMGIDVRANKMLAFVAGAMIAGLAGALNAHLTFFIGPNEYGFDRGVEILTMAILGGIGG 226 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L+ + I+ + EL G + + + L +++L + Sbjct: 227 LAGPVLGSFIITVLPELLRGFADF---------------RLVINGVILVVIVLFLPQGIW 271 >gi|153004320|ref|YP_001378645.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] gi|152027893|gb|ABS25661.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5] Length = 288 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 98/289 (33%), Gaps = 13/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S + +Y + GL+I+ G + +++ +G Y+ I+ S G+ +L I + Sbjct: 8 VISGILVGGVYALIGIGLTIIFGVMRIINFAQGELLMLGMYATWIVFSWLGIDPFLSIVI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A + G + + + L ++++ I+ + Sbjct: 68 TAPLLFLWGAFLQKTIINRVLNALPQNQILLTIGLGLIMSNSIML-----------AFTS 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + F + + Y L ++ ++ +L +T A R ++ Sbjct: 117 DYRILTTSYSSSSFSVGGISISQPLLYAFLITAAITGALYWFLLKTDTGQAIRATAQDRD 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + AF + SA G+AGA + + + + IV+LGGM Sbjct: 177 AAQLMGINVKAMSVLAFGLGSALAGVAGALISPTYYI--FPQVGSAFTLKAFVIVVLGGM 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ I+ L L+ F + + Sbjct: 235 GSVIGATLGGLIIGVTESLSAVYIASGLKELVTFVLFLGLLLFKPSGLL 283 >gi|259416810|ref|ZP_05740730.1| inner-membrane translocator [Silicibacter sp. TrichCH4B] gi|259348249|gb|EEW60026.1| inner-membrane translocator [Silicibacter sp. TrichCH4B] Length = 441 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 114/345 (33%), Gaps = 22/345 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L+L A Y M A + V +L +I Sbjct: 98 ILLALVLGAATIAAAIYTYRMLAAGLTRTVAMLAILIIGFVIYRAVLDPGVAAVESINPA 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 GL + L P+ +++ ++G +L R DYLAIATL ++EI +L Sbjct: 158 LEG-NIGGLGLPVLLAWPLGGLLAAGVAWMIGKTALGLRSDYLAIATLGIAEIIIAVLKN 216 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF---------VIYEIFMYYVLLGM 190 ++ G + R ++ F +S+ + ++ + + Sbjct: 217 EDWLSRGVKNVVGLPRPLPYEVDLQGDPAFVEKAASWGLDATTASTLYVKLGYSLMFTAV 276 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + ++ R IRDN+ A ++ + L F + SA G+AGA Sbjct: 277 LLVLLWMAQMALKSPWGRMMRAIRDNEVAANAMGKHVTRRHLQIFILGSAICGVAGAMMT 336 Query: 251 ASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIG-----------VVELC 298 +++P + ++ +VI+GG + ++ ++EL Sbjct: 337 TLDSQLTPGTYNPLRFTFLIWVMVIVGGSGNNFGSVLGGLLVWFLWIKVEPMGVMLIELV 396 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 S M + L LV+ L+ + Sbjct: 397 TSGMSEDSGLRAHLLESAAHMRLFTMGLVLLLVLRFSPRGLIPEK 441 Score = 37.2 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 29/76 (38%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 F + S ++ LI + A G+++ G GL ++ + A+G + V+ Sbjct: 26 AFGIFSGSWNSSLTILNMGLISAIMALGVNLQWGFAGLFNVGIMGFTALGGLAVVLTSMS 85 Query: 88 YGLSIWLLIPVSAMIS 103 W +++ Sbjct: 86 PTPGAWEAGGQRILLA 101 >gi|110669469|ref|YP_659280.1| ABC-type urea transport system, permease protein I [Haloquadratum walsbyi DSM 16790] gi|109627216|emb|CAJ53706.1| ABC-type urea transport system, permease protein I [Haloquadratum walsbyi DSM 16790] Length = 308 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 100/310 (32%), Gaps = 18/310 (5%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ + +L + M I + A GL+++ G +G+++L + Sbjct: 1 MIPLFIADVLKALDSIGVPVSQLLQMADSIAFIALAAIGLTVIFGMMGVINLAHGEFIMM 60 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY + + L + + + + A+ + A G I+ +K L + ++ + + Sbjct: 61 GAYITTLSINVVSLPLPVAMILGALGTAAFGAIVERTIIKRLYGRLLDSMIVTFGLGLIL 120 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + I G T + +LL + S Sbjct: 121 TQGTRIIFGNSLRSIGTPFGQVPGYTYSG----------------YRVLLLLAAIGVLGS 164 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L RT R + + ++ FA+ S G+ GA +A S + Sbjct: 165 VYLAFTRTEFGVRARATIQDPETARAMGVDTDRMYTITFAIGSGLAGLTGALYAPSATIV 224 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 F + V+ GG + L A A IL + + + +F + + Sbjct: 225 PGMGQSFL--VESFVTVVTGGSSVLLGTALAGGILGTINAVFSNLYGNFFGQIALLMTAI 282 Query: 317 NMRHTTLMVI 326 + + Sbjct: 283 IIIRLLPGGL 292 >gi|91777331|ref|YP_552539.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91689991|gb|ABE33189.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 343 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 110/299 (36%), Gaps = 18/299 (6%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y + + + A L+++ GS GL SL AIGA+S IL +++GL + + Sbjct: 43 YGLYIASSGGVMALGAMALTVLSGSAGLPSLGTAAFMAIGAFSAGILATQWGLGMLPALL 102 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ ++ A G + L +L+ G YLA+ TL + + Q + +G + Sbjct: 103 LALVLGFAAGAGVALLTLRVSGLYLAVGTLALQHVVQIVATDLDLKFTYASGFMLESPHI 162 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + + + + L+R + W +R Sbjct: 163 AGLAIDTPAKWWG---------------MTIVLLLGVYVLFRSLQRGHVGREWALLRTEP 207 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 A +L + + A+L+ FA++SA I +GA + + I+ +++V LGG Sbjct: 208 TAAATLGVSPVRARLTVFALTSAVIAASGAIDGYRLGNVQATGYSLHLAIMYLTVVALGG 267 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 L A+ ++ + + + L+ L +L Sbjct: 268 AGRLVGAVVASYAIVVLPDAIAAVLATLGIDA---TTRLAGIDNMLLGALLVCALLDLP 323 >gi|254461329|ref|ZP_05074745.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2083] gi|206677918|gb|EDZ42405.1| inner-membrane translocator [Rhodobacteraceae bacterium HTCC2083] Length = 318 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 107/324 (33%), Gaps = 30/324 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 I + L+ M + GL+++ +G+L+ Y +GAY + W+ + Sbjct: 7 NIIDGLVTGLLLFMLSAGLTLIFSMMGVLNFAHASFYMLGAYFAYQISIAL--GFWMGLL 64 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 ++ +I G G + L+ Y + LI + ++ + GK + Sbjct: 65 IAPIIVGVLGAGVERYGLRRVHQYGHVPELIFTFGLALLIEELVQFIWGKNQMP------ 118 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + ++ + F + + +++ + ++ L +T + + Sbjct: 119 ---FNIPEVLNYTAFSVAGNSIPAYKIFMIFISVGIFMGLLYVLTKTRVGMIIQAALSYP 175 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + SL + + F V +A G+AG + F IV +++GG Sbjct: 176 RTVESLGHNVPLIFMGVFGVGTALAGVAGVIAGPVLG--TFPGMAFVLGSIVFVTIVIGG 233 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF-----------------NMRH 320 + SL A+ ++ + N + S Sbjct: 234 LGSLWGALVASLLIGWLTTFAKSYNLAMSDIFNAIGISTPENMDDNIFRDLWTVTSPQIA 293 Query: 321 TTLMVIALFLVILMRSHSLLRLRT 344 L I + ++++ R LL R Sbjct: 294 DILPYILMVMILIFRPAGLLGKRE 317 >gi|85704618|ref|ZP_01035720.1| ABC-type transport system permease protein II (probable substrates branched-chain/neutral amino acids) 5 [Roseovarius sp. 217] gi|85671026|gb|EAQ25885.1| ABC-type transport system permease protein II (probable substrates branched-chain/neutral amino acids) 5 [Roseovarius sp. 217] Length = 311 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 117/316 (37%), Gaps = 28/316 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILG 85 + + + + L + G+++++ G +S + + I AY+ ++ Sbjct: 2 AVIIAVPFLVPSMQLLVNFALAKGLAVLGVTVLL-RAGQVSFGHALYFGIAAYAGAFLMT 60 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 S ++++ V + + G+ +GL +++RG + + L S IF +IL K+ +T Sbjct: 61 SMPATDFFVILIVGVLGAIVAGLFVGLFVVRYRGIFFGMLNLAFSMIFWSILEKFYHLTG 120 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G G+ F V + + +YY +L + + Sbjct: 121 GADGLRFTRP------------TVFGQALDHVQFNMVLYYSVLVLMVALGWFTHRWFASP 168 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + ++TI+ N+ L + A LS + +S+A G+ G ++ ++P+ + Sbjct: 169 VGQLFQTIKTNETRLEYLGISPKRALLSGYLLSAALCGVGGVMMGMAQGVVTPEYVWWVR 228 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 + ++ I +LGG S+ I V ++ Sbjct: 229 SAEMVFIAVLGGAGSVQGAFLGALIYEVVRTYASVYA--------------GDIWQMILG 274 Query: 326 IALFLVILMRSHSLLR 341 L ++IL L+ Sbjct: 275 GFLLIIILFAPGGLIG 290 >gi|330837584|ref|YP_004412225.1| monosaccharide ABC transporter membrane protein, CUT2 family [Spirochaeta coccoides DSM 17374] gi|329749487|gb|AEC02843.1| monosaccharide ABC transporter membrane protein, CUT2 family [Spirochaeta coccoides DSM 17374] Length = 410 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 92/320 (28%), Gaps = 18/320 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 +++ + L V+ + + + ++ A G++ V+ G + Sbjct: 15 IDRQKLLAPLALVIIYVFFAFVGRNFLTYTTLLNILDSSYYIGFIAIGVTYVI-ITGGID 73 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 L+C A + +G +W + + + G++ GL + Sbjct: 74 LSCGTVLMCAAITGGTAFKTWGWPMWASLLLIIFVGLIFGILNGLLISRLNLPPFIAT-- 131 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 + + I+ G I R + F + Sbjct: 132 ----------LGTQMISLGVGSIVSNVRSATFPPRGAADSWFKDLFKYMSPDNVSFPTGA 181 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 L + F++ + L +T + I N++A + ++ A+ VS G+ G Sbjct: 182 LVLFFVAFLAYVVLTKTKMGRYIFAIGSNKEAARLSGIDVKKWEMMAYVVSGLMAGIGGI 241 Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302 FAA + P E + VI GG ++ I+ + M+ Sbjct: 242 AFAAVYTTVMPAQGSGFELYAIAGTVIGGTSMSGGSGTILGTMIGVFIMSILRVGLPSMD 301 Query: 303 FYYFNSLLKFDCSFNMRHTT 322 L Sbjct: 302 LQAHYQTLFTGIVVVGAVLL 321 >gi|303229642|ref|ZP_07316430.1| branched-chain amino acid ABC transporter, permease protein [Veillonella atypica ACS-134-V-Col7a] gi|302515767|gb|EFL57721.1| branched-chain amino acid ABC transporter, permease protein [Veillonella atypica ACS-134-V-Col7a] Length = 293 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 99/308 (32%), Gaps = 27/308 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A GL++V G L ++++ + IGA+ + + + + ++I++ + V Sbjct: 6 LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFNVNIFVALIV 65 Query: 99 SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G ++ + + +A LI + L + G Sbjct: 66 AMAVGAVLGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + M + + + ++T I A R + + Sbjct: 126 IGGLIDFGVFKISMVQIIGLGVSVLLMIILNVVI-----------KKTKIGKAIRAVSMS 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + L ++SA AG S + I P M ++++ILG Sbjct: 175 TETAALLGINPTMIISVTVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ +++ IL F + F + +++ R Sbjct: 234 GLGNITGAMVGGFILGIAEIFSVAYGASTFRDAVAFG-------------LIIVLLFWRP 280 Query: 337 HSLLRLRT 344 L + Sbjct: 281 QGLFGSKD 288 >gi|302529455|ref|ZP_07281797.1| predicted protein [Streptomyces sp. AA4] gi|302438350|gb|EFL10166.1| predicted protein [Streptomyces sp. AA4] Length = 572 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 118/310 (38%), Gaps = 21/310 (6%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-YVILGSR 87 Y +G+ +++ + GL +V GS G++SL + AIGA+ + + Sbjct: 27 IGLTVGLNGYFAYLGVSVVVAAIALLGLGVVTGSAGMISLCQLTFGAIGAWVVSALNVAH 86 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 + + + +G G+++GLP+L+ RG LA+ TL ++ L++ + Sbjct: 87 APGGFLFWLLLGGLAAGVVGVLIGLPALRLRGINLAVVTLGLAAAADVTLVEIQ------ 140 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 + S V + + + + + + A ++ +LRR Sbjct: 141 --------------FPGTTEGVSVDRPSLVADDNAYFLLCVIVLIVCALLVHFLRRGPWG 186 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 ++W + +++ + ++ AKLSAFAVS+ G++G A P F +++ Sbjct: 187 SSWAAVAFSERGTAAAGASVRTAKLSAFAVSATLGGISGGLLTAQVGFAFPTSFAPLQSL 246 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + + I+ G + + + V EL + F + Sbjct: 247 ALYVLAIMSGAHLIDMAVFGAVLWVAVPELLKRWGVPQDWGYVIFGLLGIQALAGRGNLG 306 Query: 328 LFLVILMRSH 337 + L R Sbjct: 307 TAIRELWRRR 316 >gi|84502415|ref|ZP_01000551.1| putative branched-chain amino acid transport system permease protein [Oceanicola batsensis HTCC2597] gi|84389227|gb|EAQ02024.1| putative branched-chain amino acid transport system permease protein [Oceanicola batsensis HTCC2597] Length = 338 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 68/309 (22%), Positives = 123/309 (39%), Gaps = 26/309 (8%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 ++ + LIY + L+++ GS G +SL YAIGAY+ IL + G Sbjct: 41 FAPAFAKNFFVFQMTLWLIYAIAILALNLLTGSSGQVSLGHSAFYAIGAYTAAILLNETG 100 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L+ L +PV+A+ G + G P+L+ G LA+AT ++ I+ Sbjct: 101 LNYVLTLPVAALFGFVAGFLFGFPALRLTGVALAMATFALAVATPAII------------ 148 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + G + + + + ++YY+ L + L L L + A Sbjct: 149 KLHVFEEWTGGVQGLFVDKPRAPFGLPISDDAWLYYLTLAVGVLVFLFGLSLLNSRTGRA 208 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 +RDN A ++ + K F VS+A +AGA A + ++ D F F I++ Sbjct: 209 CLALRDNPIAASAMGVNVALYKTLIFGVSAAIASIAGALSAIAIQFVAVDSFTFHLAILL 268 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 +++GG+ L A ++ V + G++ + + L Sbjct: 269 FVGMVVGGIGWLPGSLVGAAFVVFVPNIADGISQGLSGA--------------VFGGLLL 314 Query: 330 LVILMRSHS 338 LVI + + Sbjct: 315 LVIFVLPNG 323 >gi|160899919|ref|YP_001565501.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160365503|gb|ABX37116.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 306 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 96/300 (32%), Gaps = 15/300 (5%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 L+ + A GL++V G + +++L Y GAY R G ++ + A Sbjct: 18 LMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRTGSFTAAVLVAAVATGVAG 77 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 ++ + + L + + +L + I + + + + + Sbjct: 78 VVLELVLIRR----------LAVRDHLAQVLGSYAVILIANDLVKMVWGPAPVMLNMPAA 127 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + ++Y + +++ + + ++ RT R N++ + Sbjct: 128 LSGPVQLLPELMYPAYRLMIIVFGLAAALGLYWFVTRTRAGVLVRAGASNRQMATLMGVR 187 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + L F + + +AGA I+V+ +++GG+ S+ Sbjct: 188 VPLLFLGVFTLGAMLAAVAGALLGPITSV--QVGMGEDILILVLVCIVIGGIGSIRGALV 245 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRSHSLLRLR 343 ++ V + + + + + +V++ R L R Sbjct: 246 GALLVGMVDTAGRAFLPMLLRQVFSPAVASSVGPTLAAISIYVLMAVVLVYRPSGLFPAR 305 >gi|78061475|ref|YP_371383.1| ABC sugar transporter, inner membrane subunit [Burkholderia sp. 383] gi|77969360|gb|ABB10739.1| monosaccharide ABC transporter membrane protein, CUT2 family [Burkholderia sp. 383] Length = 345 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 99/326 (30%), Gaps = 18/326 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + F + + V+ + + + ++ + + A + V+ Sbjct: 25 ARFFNPAARQKLLAFASLVLLIVFFSIASPNFLEVDNLVAILQATAVNGVLAVACTYVII 84 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + G + L+ A ++ +++G+ + + I + G + G K + Sbjct: 85 TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPIGILAALFFGALSGSVSGFVIAKMKVPP 143 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + G + + R + T +I + Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGNLIPAL 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +L + ++ + L RT + N++A + K++ + S A Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296 G+AG A+ + P + + E + ++VI GG S+ I+ + Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322 M+ + + Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337 >gi|84502440|ref|ZP_01000576.1| ABC transporter ATP-binding protein [Oceanicola batsensis HTCC2597] gi|84389252|gb|EAQ02049.1| ABC transporter ATP-binding protein [Oceanicola batsensis HTCC2597] Length = 322 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 113/313 (36%), Gaps = 32/313 (10%) Query: 35 SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-----GSRYG 89 + ++ + + LI + A LS + LG++S + I Y+ + Sbjct: 18 NDFWLTQVATRALILGITALSLSFLATYLGVVSFAQAMMAGIAGYTIAYFGPNTVAIGWE 77 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L WL IP++ +++ G + GL + + RG Y + TL + F + + + NG G Sbjct: 78 LPFWLSIPLALVLATLAGALTGLVARRSRGIYAIMITLAIGVAFFYLTRQNYSLFNGWTG 137 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 G +R+ + +Y + L + + ++ R+ + Sbjct: 138 FSGVRAPQVFGLNLRA--------------PVPLYLMTLAVAVAALVLVAGFVRSPLGLT 183 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + +RD +L + ++AFA S G G +RIS I + Sbjct: 184 IQALRDAPGRVRALGIPALGPIVAAFAFSGFIAGAGGILNVWYNERISSFSVGLGPIIDI 243 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 + I ++GG+ + + + + R TL+ + L Sbjct: 244 LIICVIGGLRHPAGAFIGAIAFVLLETFAVDLID-------------RDRFNTLIGLVLL 290 Query: 330 LVILMRSHSLLRL 342 ++++ + L + Sbjct: 291 AIVMLAPNGLQGM 303 >gi|115522621|ref|YP_779532.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gi|115516568|gb|ABJ04552.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 286 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 97/304 (31%), Gaps = 26/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL++V G LG+++L+ Y IGAY + L +G L+ Sbjct: 8 LLNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMIGAYLALSLTGLFGDVFLALVAG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +I L + Q +L+ + I V Y Sbjct: 68 IPLAFALGLLIEWLFIRHLYDR----------DHLQQVLLTFALILVFNEFQQVIWGSYP 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S + + + Y ++ ++ L+ ++ +++T + R N++ Sbjct: 118 HAIPAPSYLSSSVQLTEGLSYPVYRLALMAICVVLAIAMAFVIQKTRVGRLIRAAESNRE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L FA A AG A I +V++GG+ Sbjct: 178 MVEALGFDSRLIFRMVFATGVALAATAGMLAAPIESA--YPGIGDRVLITSFVVVVIGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + ++ + ++ + LV+++R Sbjct: 236 GSVRGAFIGSLLIGLADAFGKVF--------------LPQFSSIIIYALMALVLVVRPAG 281 Query: 339 LLRL 342 L Sbjct: 282 LFGR 285 >gi|328545161|ref|YP_004305270.1| branched-chain amino acid ABC transporter permease [polymorphum gilvum SL003B-26A1] gi|326414903|gb|ADZ71966.1| Branched-chain amino acid ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1] Length = 342 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 90/317 (28%), Gaps = 16/317 (5%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 + + L+ + A GL+IV G + +++ ++GA+ + Sbjct: 36 FLAVGNPSTWLTLTVAGLAMGLMIFIMASGLTIVFGLMDVINFGHGAFISVGAFVGFTVL 95 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILIKWKPIT 144 + + + +I + + G ++ + ++ Sbjct: 96 GWLAGWTADPRFMVNLGAVFIAIIASMAATGAMGYAFERVIVMPVYGQHLKQILVTMGGL 155 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 + R E + + L ++ LR T Sbjct: 156 IIAQQMIHVIWGPDAIHLARPESLRGSIVLGEAAIEKYRLLAVAIGLGLFLAMRHILRST 215 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 I R +N + +L I L F SA G+ G + ++ I+ M Sbjct: 216 KIGLLVRAGVENGEMVEALGYRIRRLFLLVFMAGSALAGLGGVMWGLYQETITAHM-GSE 274 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 ++V +VI+GG+ S+ ++ + + Sbjct: 275 IMVLVFIVVIIGGLGSVEGCFIGALLVGLLSNYTAFVA--------------PKVALVST 320 Query: 325 VIALFLVILMRSHSLLR 341 + + +++ R L Sbjct: 321 IALMVAILMWRPQGLYP 337 >gi|221209427|ref|ZP_03582408.1| ribose transport system permease protein RbsC [Burkholderia multivorans CGD1] gi|221170115|gb|EEE02581.1| ribose transport system permease protein RbsC [Burkholderia multivorans CGD1] Length = 345 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 95/319 (29%), Gaps = 18/319 (5%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 + + V+ + + ++ + + A + V+ + G + L Sbjct: 32 TRQRLLAFASLVLLIVFFGAASPNFLEVDNLVAILQATAVNGVLAVACTYVIITSG-IDL 90 Query: 69 NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128 + A ++ + +G+ + L I + G + G K + Sbjct: 91 SVGTLMTFCAVMAGVVLTNWGMPLPLGIAAALGFGALSGCVSGFVIAKMKVPPFIAT--- 147 Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 + + G + + R + T ++ + + +L Sbjct: 148 ---------LGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQDSLIGHLVPALPIPNAVL 198 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + ++ + L RT + N++A + K++ + S A G+AG Sbjct: 199 ILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAVCGIAGLL 258 Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303 A+ + P + + E + ++VI GG S+ I+ + M+ Sbjct: 259 IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTNGLRIMSV 318 Query: 304 YYFNSLLKFDCSFNMRHTT 322 + + Sbjct: 319 AQEWQTVVTGVIIILAVYV 337 >gi|284043596|ref|YP_003393936.1| ABC transporter [Conexibacter woesei DSM 14684] gi|283947817|gb|ADB50561.1| ABC transporter related protein [Conexibacter woesei DSM 14684] Length = 908 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 108/279 (38%), Gaps = 15/279 (5%) Query: 44 IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103 + L YV+ L ++V + G +SL V AIG ++ L G S + +A I+ Sbjct: 335 TRFLAYVVLFLALGLLVRTSGQVSLAHVSFMAIGVAAFSHLAVDQGWSWPAALLAAAAIA 394 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 G ++ +P+++F G YLA+ATL Q + + AG+ V + Sbjct: 395 APIGALLAVPAIRFPGLYLALATLGFGIALQQMFYAQDFMFGAGAGLTVPRPELAGVSFE 454 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 YY L + + A +++ + R+ + R + D+ + Sbjct: 455 GDT---------------GFYYFTLAVTAIVALLVVGITRSRLGRLLRAMSDSPTGLAAS 499 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 ++ +++ F +S++ +AG A++ + D ++ ++ + +++++ Sbjct: 500 GASVNVSRVLVFCLSASIGAVAGVLDGAAQTLVGGDQYQPILSLQLFAVLMIAVGGVPWY 559 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 A ++ + +L F CS Sbjct: 560 AVMAAFGMVVAPAYISTDPSVTYAFMLLFGCSAIAFAVM 598 Score = 62.6 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 84/301 (27%), Gaps = 19/301 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +I + ++ + A GL + + G+ + + A+ + L +G+S L Sbjct: 3 PFIVAGLTIGSVFALAAVGLVLTYKTSGIFNFAHGALASAAAFGFYWLRDLHGVSWPLAA 62 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++ ++ A L+ ++ + G Sbjct: 63 ALVVLVGAPLVGLLLARI----------ADLLAGASLAMKVVAMVGVLLAVQGGLQLLFP 112 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 V S + F + +A + ++LRR+ A R + D+ Sbjct: 113 PGESRQVASFLPSDSFELFGTPVTVAQLITFAVGVLATAGLTVFLRRSRTGLAMRAVVDD 172 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + S+ + +A+ + S G +G + + +G Sbjct: 173 TELLDSMGVAPQRVRRTAWIIGSMMAGASGV--LLAPLLPLDATSITFLVVTAFGAAAIG 230 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G +SL + L S + LF +++ Sbjct: 231 GFSSLPLTYAGGLAIGVGQSLLQKYFVDATGIAGGLASSLP-------FLVLFGLLVFAP 283 Query: 337 H 337 Sbjct: 284 R 284 >gi|316935501|ref|YP_004110483.1| urea ABC transporter permease UrtB [Rhodopseudomonas palustris DX-1] gi|315603215|gb|ADU45750.1| urea ABC transporter, permease protein UrtB [Rhodopseudomonas palustris DX-1] Length = 308 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 92/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + + + + L I Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNLFQSYLPSLFAGYFFI 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + I L + +L W + +G Sbjct: 82 AMILAFIASGALGMLVEWGL--IRHLYKRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + + I +V+ ++A + L + R + N+ + Sbjct: 140 LPQWMLGSKQVTDTIEVPINGIFVMCLTVLITAVVFYLLFWSRWGRQVRAVMQNRVMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + G+AG+ F + + +V+ GG SL Sbjct: 200 VGINTERVDRYTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLF 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ L+++MR L L Sbjct: 258 GTIASAFSISQAQSTMEFFMSGSMAK-------------VLTLLAIVLILMMRPQGLFAL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|254428621|ref|ZP_05042328.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] gi|196194790|gb|EDX89749.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] Length = 308 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 94/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I+V+ A GL+I+ G +G++++ +GAY+ + + + L + Sbjct: 22 LSLFSIFVLMALGLAIIFGQMGVINMAHGEFMILGAYTTYLTAQVFESLMPGLYGGYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++ + + +L W + +G + Sbjct: 82 AMFLAFVVTFALGALVEW--LMIRHLYHRPLDTLLATWGLSLILQQTYRSVFGAREVGVS 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + V I +V++ ++ ++ L + R+ R + N+ + Sbjct: 140 LPDWMMGSIAVTDLVEIPINGIFVMVLALLIAFAVYLLMYRSGWGRKVRAVVQNRPMAEA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + FA+ G+AG+ F + + +V+ GG SL Sbjct: 200 VGIDSGRVDRVTFALGCGIAGVAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAQSLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++ + ++++R L + Sbjct: 258 GTIASAFTISQAQSTMEFFLSGSMAK-------------VLTLLVVVGILMLRPQGLFAM 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|146337632|ref|YP_001202680.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146190438|emb|CAL74437.1| putative branched-chain amino acid ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 327 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 104/334 (31%), Gaps = 16/334 (4%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 + + L L V+ L++ L + + ++ + A GL++V G + +L Sbjct: 3 KPKRDIAPLLLPVVLALLMIPLVGSTSSWVTLTVASLAMGMMIFIMASGLTLVFGLMDVL 62 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + A+GAY ++ + + + ++ + + Sbjct: 63 NFGHGAFIAVGAYVATLVLLPLASWAQADSLLTNLAVLVPAALLSMGVTGALGLVVERVL 122 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 L + ++ A + F V + Sbjct: 123 VLPVYGQHLKQILMTTGGLIVAEQTLYALFGPQIIPMPLPAALRGSFILGDVAISKYRLL 182 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 LL + +I L L RT I R +N++ +L I L F SA G+ Sbjct: 183 ALLIGLVIFVAIELVLNRTKIGLLIRAGVENREMVEALGYRIRRLFLGVFMTGSALAGLG 242 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G + R+++ ++V +VI+GG+ S++ ++ V + Sbjct: 243 GVMWGLYREQV-HASIGDELTVLVFIVVIIGGLGSITGCFIGAILVAMVANYGGFL---- 297 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 ++ + V++ R L Sbjct: 298 ----------VPKLALVSNILLMVAVLMWRPRGL 321 >gi|254254454|ref|ZP_04947771.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component [Burkholderia dolosa AUO158] gi|124899099|gb|EAY70942.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component [Burkholderia dolosa AUO158] Length = 345 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 97/326 (29%), Gaps = 18/326 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + F + + V+ + + ++ + + A + V+ Sbjct: 25 ARFFNPAARQKLLAFASLVLLIAFFSVASSNFLEVDNLVAILQATAVNGVLAVACTYVII 84 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + G + L+ A ++ + +G+ + L I + G + G K + Sbjct: 85 TSG-IDLSVGTLMTFCAVMAGVVLTNWGMPLPLGIAAALGFGALSGCVSGFVIAKMKVPP 143 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + G + + R + T +I + Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLLGSLIPAL 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +L + ++ + L RT + N++A + K++ + S A Sbjct: 192 PIPNAVLILFVVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDGWKIAVYTFSGAV 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296 G+AG A+ + P + + E + ++VI GG S+ I+ + Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSILGTIIGAFIMSVLTN 311 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322 M+ + + Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337 >gi|163855473|ref|YP_001629771.1| branched-chain amino acid ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163259201|emb|CAP41501.1| branched-chain amino acid ABC transporter, permease protein [Bordetella petrii] Length = 314 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 117/328 (35%), Gaps = 37/328 (11%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L A+ L+ + + S+ + + + V+ V +G L+ Sbjct: 5 LLTPAIASVGLVAIAASLLQGGGLAASLVLWLAVNVLITASFRFVT-LIGELNFAVAGFV 63 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +GAY + + L + SA+ +G ++ G +L+ +G Y + + +E+ + Sbjct: 64 GLGAYMAGVGSVTFNWPFLLTLVASAVFAGLISLVFGYITLRAKGPYFMLISFAFTEVIR 123 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I K + I G +G+ + ++ +++ + Sbjct: 124 MIYTKTEAI-GGSSGMVGIFPP--------------------AYLDGYLPALVVAVVLAL 162 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + ++ ++ IR+N ++ + K+ VSS G+AGA A S + Sbjct: 163 LWALWFIEKSDFGKVLVAIRNNDAIVETVGINVHLTKVLCLGVSSFVAGIAGALLAYSNN 222 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISP F F + ++ + +GG + + +L + +F Sbjct: 223 VISPGDFGFLLAVYALAYLKVGGESHILGAVVGAIVLTLL---------------GQFAL 267 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 SF A+ + +L+ L+ L Sbjct: 268 SFGPYEHIFYGAAIVISVLLMPGGLIGL 295 >gi|149203025|ref|ZP_01879996.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. TM1035] gi|149143571|gb|EDM31607.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. TM1035] Length = 310 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 105/310 (33%), Gaps = 28/310 (9%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y ++++ +A G +++ G GLLSL + +A G Y + GL+ Sbjct: 22 PAYHHGNLARVMVLASYAMGYNLMFGYTGLLSLGHALFFAAGMYGMGLGVQHLGLTPAPA 81 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + + + A ++ +L+ G I TL+ ++ ++ + +T G G Sbjct: 82 LILGVLAGAAVAGVLAALALRTAGVAFMIVTLMFAQAGYLTVLYFGALTRGDEG------ 135 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + E Y L + L + LWL R+ IR+ Sbjct: 136 -------FVIQQTQRMLWGIDLSDEGNRYLAALLLFGLCLMLCLWLVRSPFGRVLVAIRE 188 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N++ L + K + +S AGA + + +I + V+L Sbjct: 189 NEERVRMLGYDVFAHKFAVMVISGTMAAAAGAAYGLLFGYVGATFASVQYSIFPLLWVLL 248 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ T + +++L G+ + + +AL + L Sbjct: 249 GGAGTVLGPFIGTLFMFYLIDLSSGV---------------TTAYMLIAGVALVALTLFA 293 Query: 336 SHSLLRLRTP 345 L+ Sbjct: 294 PQGLMGDVRR 303 >gi|302387308|ref|YP_003823130.1| inner-membrane translocator [Clostridium saccharolyticum WM1] gi|302197936|gb|ADL05507.1| inner-membrane translocator [Clostridium saccharolyticum WM1] Length = 293 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 86/305 (28%), Gaps = 26/305 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + Y + A G ++V G L L++ + + Y + + + ++ IP+ Sbjct: 11 LTGISLGGAYALIAIGYTLVYGILRLINFAHGDIFMMAGYFMIFAMASFP--WYISIPMV 68 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 +++ G+ + + + ++ +I + +L + + Sbjct: 69 LLVTVVLGVSIERVAYRPLRSAPRMSVMISAIGVSYLLQNLATYLFTALPKGYPEIPFLK 128 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + + +I+ + +T I A R + + Sbjct: 129 KIYQ----------IGGLSASFVTFLTPVLTLVIVYGLIILINKTKIGMAMRAVAKDYDT 178 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + I FA+ S + + R + P + + GG+ Sbjct: 179 ASLMGIKINRIITFTFAIGSLLAAIGSVLYFTDRMTVFPFS-GSLPGLKCFVAAVFGGIG 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ IL M + F+ F + + L Sbjct: 238 SIPGAVIGGFILGLGETALVAMGYSTFSDAFTFVLLIIILLI-------------KPTGL 284 Query: 340 LRLRT 344 +T Sbjct: 285 FGEKT 289 >gi|290962355|ref|YP_003493537.1| branched-chain amino acid transporter, permease protein [Streptomyces scabiei 87.22] gi|260651881|emb|CBG75011.1| putative branched-chain amino acid transport system, permease protein [Streptomyces scabiei 87.22] Length = 675 Score = 69.5 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 102/321 (31%), Gaps = 13/321 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 LI ++ ++ G +G +S+ + + Sbjct: 321 ALISATVAAAALIVLPFDFRQALTNSLIGMVIVLSYVVITGYVGQISVMQLALSGTAGFV 380 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 L +G+ + +++ G+ G+ +L+ RG LA+ TL + + L Sbjct: 381 LSHLSVGWGIPFPFSALGAMVLATLLGVAAGVSALRVRGVSLAVVTLAAALAMEQALFNN 440 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 RL+ + + +++L + + Sbjct: 441 TSFGGTAGVSVPPPRLFG----IDLGPKADFRGLDGNEPSPMFGFLVLAVTVALGLYVAH 496 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 LRRT + +R N++A + + K++AF +SS AG + + +S Sbjct: 497 LRRTGLGRRMLAVRSNERAAAAAGVDVRAVKIAAFTISSFIASAAGTLYGYNFGSVSAAR 556 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 F + +I +GG+T +S A + ++L K+ Sbjct: 557 FTALAALGLIGFAYIGGITMVSGAVIAGLM---------STEALLPHALDKWFGIKGTWA 607 Query: 321 TTLMVIALFLVILMRSHSLLR 341 ++L + ++ + Sbjct: 608 LLFGGVSLIVTLIANPDGIAG 628 >gi|242280017|ref|YP_002992146.1| ribose ABC transporter permease protein [Desulfovibrio salexigens DSM 2638] gi|242122911|gb|ACS80607.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638] Length = 322 Score = 69.5 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 98/312 (31%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + VV +++ + I ++ Q I + A G+++V+ + G + L+ A Sbjct: 24 LIALVVMIVIVSFLNPNFFTTGNILNILRQTAINAVMAVGMTLVILTAG-IDLSVGSVLA 82 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + ++ +A+ +GA + + IATL+ + + Sbjct: 83 LCGAVGA--SLIAAQMPVIVAVGAALGAGAILGGISGVIIAKGKVQAFIATLVSMTLVRG 140 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + G F Y + + + + M F Sbjct: 141 LTLVYTDGRPISTGFTEVA---------------DSFAFIGTGYLLGIPFPIWIMAFTFG 185 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L T + + N++A + K++ +A++ ++G + Sbjct: 186 AAWYLLNHTRLGRYIYALGGNEEATRLSGINVDRIKIAVYAIAGFLSALSGLIVTSRLSS 245 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG ++ I+ + ++ + ++ Sbjct: 246 AQPTAGYGYELDAIAAVVLGGTSLMGGKGTIMGTLLGALIIGFLNNALNLLDVSSYYQMI 305 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 306 AKALVILLAVLV 317 >gi|206558422|ref|YP_002229182.1| putative branched-chain amino acid ABC transporter permease [Burkholderia cenocepacia J2315] gi|198034459|emb|CAR50324.1| putative branched-chain amino acid ABC transporter permease [Burkholderia cenocepacia J2315] Length = 294 Score = 69.5 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W ++ ++ ++ GA G+ + L++ + L+++ ++ G Sbjct: 63 YFGLPYWAMLALAPLMVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + +V+L R L Sbjct: 277 IMAIVLLFRPAGLFG 291 >gi|238761182|ref|ZP_04622159.1| Permease protein of sugar ABC transporter [Yersinia kristensenii ATCC 33638] gi|238761435|ref|ZP_04622411.1| Permease protein of sugar ABC transporter [Yersinia kristensenii ATCC 33638] gi|238700409|gb|EEP93150.1| Permease protein of sugar ABC transporter [Yersinia kristensenii ATCC 33638] gi|238700662|gb|EEP93402.1| Permease protein of sugar ABC transporter [Yersinia kristensenii ATCC 33638] Length = 707 Score = 69.5 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 93/299 (31%), Gaps = 21/299 (7%) Query: 29 FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88 FL + + Q + + G+SIV+ G + L+ +A+ A++ V S Sbjct: 48 FLPGFFALSSLTDTSRQWGEFALVVMGMSIVM-LGGGIDLSVGAIFALSAFTAVSANSLL 106 Query: 89 GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148 GL +W + ++ + G G+ R + + Sbjct: 107 GLPLWQSLLLTLAVGALAGAFNGVLIGYLRLRAFLTTLVSFILLRTLF------------ 154 Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208 + + +S + ++ + + ++ + L L R + Sbjct: 155 ---DILVVKYATQIQQSSVDNSQWNFIGEEGIGPLPVSFVLAVLVAIGLHLLLSRMRLGW 211 Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268 + + ++++ ++ + + +S G+AG A + P E + Sbjct: 212 HIQAVGGSRRSAWNTGIAVRRTVFITYVLSGLCCGLAGFLLATRMGGVGPGTGLGLEIMA 271 Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + V+ GG S+ K I++ + + ++ + Sbjct: 272 LTAGVVGGNSLGGGRGSIMKGILGAIIVLLLTNGLIRLGLPSGSTQMVLGVVLIAAVFL 330 >gi|126736710|ref|ZP_01752449.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. CCS2] gi|126713825|gb|EBA10697.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. CCS2] Length = 388 Score = 69.5 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 102/367 (27%), Gaps = 36/367 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + ++ + V +L G + L + A + +V G G+LSL Sbjct: 14 WFILILSIFTVIVTVLSEVTGVDLISTSFVKTLGKTLCLCLVAIAMDVVWGYCGILSLGH 73 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISGACGMIMGLP 113 + IG Y+ + +L ++ + L Sbjct: 74 FAFFGIGGYAIGMWLMYARTEGIVLTSLAGQPIPPTPAEISDAIGNQIFGVVGSSEFPLI 133 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 L + +++ ++ W + G+Y++ + + + Sbjct: 134 WAFADSLTLQLLMVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSG 193 Query: 174 SSF------------------VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 I + + W+ + + + IRD Sbjct: 194 LRGNNGLSGLQNIPGYEDVPQATVSIIFFIASAVALGAGYAFFAWIVSGKMGSVVKGIRD 253 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ L + KL F ++ G+AGA + I+P +I + V + Sbjct: 254 NEARVRFLGYHVESYKLFIFTTTAVVAGIAGALYYPQAGIINPGEIAPIASIYLAVWVAI 313 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L A + + G L + + L+ ++ V L Sbjct: 314 GGRGRLYGAVIGAAFVSLLSSWFTG-GGAPNIDLGLYVIQWTDWWLVLLGLSFVAVTLFF 372 Query: 336 SHSLLRL 342 + L Sbjct: 373 PKGIGGL 379 >gi|39934326|ref|NP_946602.1| putative branched-chain amino acid transport system permease [Rhodopseudomonas palustris CGA009] gi|192289854|ref|YP_001990459.1| urea ABC transporter permease [Rhodopseudomonas palustris TIE-1] gi|39648174|emb|CAE26694.1| putative branched-chain amino acid transport system permease protein [Rhodopseudomonas palustris CGA009] gi|192283603|gb|ACE99983.1| urea ABC transporter, permease protein UrtB [Rhodopseudomonas palustris TIE-1] Length = 308 Score = 69.5 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 92/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + + + + L I Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNFFQSYLPSLFAGYFFI 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + I L + +L W + +G Sbjct: 82 AMILAFIASGALGMLVEWGL--IRHLYKRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + + I +V+ ++A++ L + R + N+ + Sbjct: 140 LPQWMLGSKQVTDTIEIPINGMFVMALTVLITAAVSYVLFWSRWGRQVRAVVQNRVMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + G+AG+ F + + +V+ GG SL Sbjct: 200 VGINTEKVDRYTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLF 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ ++++R L L Sbjct: 258 GTIASAFSISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMVRPQGLFAL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|253700660|ref|YP_003021849.1| inner-membrane translocator [Geobacter sp. M21] gi|251775510|gb|ACT18091.1| inner-membrane translocator [Geobacter sp. M21] Length = 294 Score = 69.5 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 88/290 (30%), Gaps = 13/290 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +++ S IY + +I+ S G+++ +G + + L + I Sbjct: 9 QFVISGLATGAIYALIGLSFAIIFNSTGIINFAQGEFVMLGGVLTIFCINALQLPLPAAI 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + G++ +++ + ++ +I++ ++ + GK Sbjct: 69 CAAVAGTTVIGLVFERLAIRPLKNATPLSLIIITIGASILIRGLVMLLWGKD-------- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + ++ + L+ T A R N Sbjct: 121 ---TQALPAFSGNDPISVAGATLLPQHLWIFGVTILVIVGCRLFFHHTISGKAMRACSFN 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +A + ++ L +F +S+A +AG A + I+G Sbjct: 178 PRAANLVGVSVGRMVLFSFVISAAVGSLAGVIIAPLTMTA--YDVGVMLGLKGFCAAIMG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 GM S IL + L G+ + + F + + Sbjct: 236 GMGSGLGTVLGGLILGTLESLGAGLISSGYKDAIAFFILLLILFIRPQGL 285 >gi|313902321|ref|ZP_07835725.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter subterraneus DSM 13965] gi|313467369|gb|EFR62879.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Thermaerobacter subterraneus DSM 13965] Length = 299 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 99/305 (32%), Gaps = 16/305 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L +++ +A+GAY + L Sbjct: 6 VVNGLTVGSIYALVALGYTMVFGVLKMINFAHGDLFALGAYLGLTFLIWGALGQGTGGLA 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +++G + + + ++ ++ + F Sbjct: 66 GVLLAGLLAALSVGLAGVLVERVAYRPLRGAGRL--PAVVSALGMSVFIQNGIMLIWGAF 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ + V + +L G L ++ L+++ T + A R I + + Sbjct: 124 PVAFPHDMLPEASWSVGGVTVSLMRLVILGGSLVLMLALYLFVQYTRLGAAMRAIAVDHE 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + +A G+AG +++ M + + + ILGG+ Sbjct: 184 TARLMGIDVNRLIQLVFLLGAALGGLAGVMVGLYYGQLNFTM-GWLYGLKAFTAAILGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L L G + + F L L++L+R Sbjct: 243 GNIPGAMVGGLVLGLAETLAAGYVAGEWKDAVAF-------------FILILILLVRPTG 289 Query: 339 LLRLR 343 LL R Sbjct: 290 LLGER 294 >gi|269792300|ref|YP_003317204.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099935|gb|ACZ18922.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] Length = 294 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 88/303 (29%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G S+V L + IG Y+ + G++IW+ + Sbjct: 9 IINGLSLGSVYALIAVGYSLVYSILLFSNFAHGGFLVIGGYTCYYALNSMGVNIWVAGAL 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G ++ + K + ++ ++ ++ G + A Sbjct: 69 SLLAGGLSAVLTEKIAYKPIRERTSVTLYLLIASMGMSIVIENLFVVTVGGRFRALPPVI 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V F L+ + L+L +T A R N + Sbjct: 129 PTNPVN--------FFGIATTSAFDIISLVTAVVCLTGLQLFLSKTKWGLAIRAASYNLR 180 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F V+ + G F + + I ++GG+ Sbjct: 181 TAGLMGVNVSLLISIVFFVAGLLASIGGIFLSVRY---TLYPQLGIITIKAFVAAVIGGL 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + IL L G+ F ++ L +L+R Sbjct: 238 GSLPGAVVGSLILGLAEMLTAGLISSQF-------------RDLVVFALLIFTLLIRPTG 284 Query: 339 LLR 341 L Sbjct: 285 LFG 287 >gi|296121046|ref|YP_003628824.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776] gi|296013386|gb|ADG66625.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776] Length = 328 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 94/291 (32%), Gaps = 20/291 (6%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + + + ++ + A S + ++ + + + G+ V+ G + L+ Sbjct: 2 KRILGILGILIAVMVVTGILQPAFLSGYNLSNVTQLSAYFAILSIGVMFVI-ITGGIDLS 60 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + +L +YG L I ++ G GL K + + TL Sbjct: 61 IGPVVGLVGCLLPLLIVKYGFHPALAIAFVMGVAALIGTTHGLLITKAKLQPF-VVTLCG 119 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 I++ + N G L + + + + ++ Sbjct: 120 WLIYRGLARWITGDANQGFGNSFNGLLEISRKKIP------------LPGDYQVPIPVVY 167 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 M ++ ++L +T I N++A KL A+ + S G G Sbjct: 168 MLIIAVLAAIFLNKTVWGRYLYAIGRNEQAAHFSGINTDRIKLMAYVLCSTIAGFGGVLL 227 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGV 294 A + + P + + I+ +LGG S++ + +L + Sbjct: 228 AFDLNSMQPSSHGNTYELYAIAAAVLGGCSLRGGEGSVAGVVIGAVLLRVL 278 >gi|237752243|ref|ZP_04582723.1| ABC transport system permease [Helicobacter winghamensis ATCC BAA-430] gi|229376485|gb|EEO26576.1| ABC transport system permease [Helicobacter winghamensis ATCC BAA-430] Length = 299 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 93/290 (32%), Gaps = 11/290 (3%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + +Y + A G ++V G L L++ +GA+ + +G+ ++ ++ Sbjct: 11 INGLSLGSMYALIAIGYTMVYGCLRLINFAHADIMMVGAFLVFFAVNAFGIPFYVSAILA 70 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ G G+++ + I+ LI + L + G + + +F+ Sbjct: 71 VILCGILGVLIDKIAYTPLRSAPRISMLITAIGVSFFLENVFNVFFGSTPRFFSAPEFFM 130 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 V V + L ++ +L T A R + Sbjct: 131 QP----------IAIFGVSLTAITIIVPVVTLVLLVLLLRFLHYTKQGMAIRASAFDINT 180 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + FA+ S G+ G F+A S I P M + + +LGG+ Sbjct: 181 VRLMGINVNNIIALVFAIGSMLAGIGGIFYAISYPTIDPLM-GVLIGLKAFAAAVLGGIG 239 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 S+ IL + + F F + I + Sbjct: 240 SVGGAVLGGFILGFTEVMAVALFPELGGYKDAFAFLFLILVLLFRPIGIM 289 >gi|91780885|ref|YP_556092.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693545|gb|ABE36742.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 334 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 108/304 (35%), Gaps = 17/304 (5%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 + + + + + I +L A ++ G G SL I GAY+ Sbjct: 12 VIGIAVLGLPWIGNSFAVTTAIAVLYLAYQALAWNLTGGLAGQFSLGNTIFIGAGAYTST 71 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL--KFRGDYLAIATLIMSEIFQNILIKW 140 L +GLS W + A+++ ++GL + RG Y A+ TL ++++ Q ++ Sbjct: 72 YLFLTFGLSPWFGLIAGALLAVVLAYLIGLLTFRLNLRGLYFAMVTLALAQMVQVLVENM 131 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + + F S YY++LGM +A ++ Sbjct: 132 PSLGGAYGLLIPVRGTSFAAFQFESR--------------AAYYYIVLGMVTGAACLMTA 177 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 +RR +R+N+ A ++ I+ AF +S+ + G F A I P Sbjct: 178 IRRGRAGLMLDGLRENENAARAVGVPIVRNMQIAFGLSACLAAVGGTFIAQYTLFIDPKS 237 Query: 261 -FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 F ++E + + ++GG +L V + + L + + Sbjct: 238 TFAWTEAVYFLLPAVVGGSRHWWGPVIGAILLGVVSDGTQLLFGDSIKGLPQIIYGIVVI 297 Query: 320 HTTL 323 + Sbjct: 298 IVVM 301 >gi|90580507|ref|ZP_01236313.1| ribose high-affinity ABC transporter permease component [Vibrio angustum S14] gi|90438416|gb|EAS63601.1| ribose high-affinity ABC transporter permease component [Vibrio angustum S14] Length = 327 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 30/312 (9%), Positives = 87/312 (27%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + + G+ + + + F Sbjct: 88 LCGALAASMIALEIPVLIAVPTALLAGALLGGISGVIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T + +F + I V + A Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADVFAWFGTGYALGIPVPVWLMVFVF-----A 190 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L T + N+ A + K+ +A+ +AG + Sbjct: 191 GVWYLLNHTRFGRYIYALGGNESAARLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|89093398|ref|ZP_01166347.1| probable transmembrane ABC transporter protein [Oceanospirillum sp. MED92] gi|89082377|gb|EAR61600.1| probable transmembrane ABC transporter protein [Oceanospirillum sp. MED92] Length = 292 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 104/303 (34%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + I Y + + GL+I+ G L +++ Y +GA+ + G++ W + + Sbjct: 13 LLVGLINGSFYALLSLGLAIIFGLLKIINFAQGALYMLGAFIAFLALKYMGINYWAALII 72 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G G++M ++ + + +L+++ I+ G +G+ A Sbjct: 73 VPVCVGLVGILMERFLIRPIANEDHLYSLLLTFGLALIIQGAFTHMFGSSGLSYAIP--- 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F+ + ++++ + + +T + R +N + Sbjct: 130 -------EELKGGNRLPFMYLPNYRAWIIIASVAVCFGTWYMIEKTKLGAYLRAGTENPQ 182 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F A G AG A + I+V +IV++GGM Sbjct: 183 LMQAFGINVPLIVTLTFGFGVALAGFAGVMAAPVYSV--SPDMGSNILIVVFAIVVIGGM 240 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + V L + TT++ + + +V+L++ Sbjct: 241 GSIGGAILTGLGMGVVEGLTKYF--------------YPEASTTVIFLVMVIVLLLKPAG 286 Query: 339 LLR 341 L Sbjct: 287 LFG 289 >gi|260433662|ref|ZP_05787633.1| branched-chain amino acid ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417490|gb|EEX10749.1| branched-chain amino acid ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] Length = 291 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 102/305 (33%), Gaps = 29/305 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96 + S +Y + A G ++ + ++ +GA+ + GL WL + Sbjct: 7 LISGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVTIGLTNTEYMGLPFWLAL 66 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P+S I GA G ++ ++ A +I++ ++ + G Sbjct: 67 PISLGIMGALGYLLDRLIIRRLFGESQTAVVILTIALGFVIRFVAGLIWG---------- 116 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 T+ + + ++ + V++ L+ + ++ +T + A + N Sbjct: 117 -HEPQTLENPLAGKEVRFGGLVLGMEDVAVIVVTVLLTWGLYVFFSKTKLGLAMQGASQN 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 Q A + + + + + ++ G+AG FAA S D I + ++G Sbjct: 176 QLAAYYMGVPVKRVQGFIWGLAGVVAGIAGILFAAK---GSVDPTTGLLGIKAFAAAVIG 232 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G SL I+ + ++ + L V++ R Sbjct: 233 GFGSLPGALAGGLIVGVIEPFASRYIAAGYSQIAP-------------YALLLAVLIFRP 279 Query: 337 HSLLR 341 H L Sbjct: 280 HGLFS 284 >gi|217969800|ref|YP_002355034.1| branched-chain amino acid ABC transporter permease [Thauera sp. MZ1T] gi|217507127|gb|ACK54138.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 317 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 125/335 (37%), Gaps = 36/335 (10%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + IL + L+ + T +++L + +FA ++++G GLLS Sbjct: 8 FARAMPILFGALFLIGLVAPFAVYPTF--------LMKVLCFGLFACAFNLLLGFAGLLS 59 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 Y +L G++ L I + +GA G + G+ +++ G Y A+ TL Sbjct: 60 FGHAAFLGSAGYVCGMLVRDLGVTPELGILGGTLAAGALGWVFGVLAIRRTGIYFAMITL 119 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +S++ ++++WK ++ + R F + + MYY++ Sbjct: 120 ALSQMVYFVVLQWKATGG--------------EDGLQGVPRGHLFGVIDLSNNLAMYYLV 165 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + + II + + IR+N+ SL + KL AF +S+A GMAGA Sbjct: 166 FAVFCIGFFIIYRAIHSPFGQILKAIRENEPRAMSLGYDVAKFKLLAFVLSAALAGMAGA 225 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 S + + V+ + +LGG+ ++ A ++ + + Sbjct: 226 TKTLVFQLASLTDVHWHMSGEVVLMTLLGGLGTVLGPLVGAATIVSLQTELADSVGSWVT 285 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +M + +L+ ++ Sbjct: 286 --------------VIMGTIFVVCVLLFRRGIVGE 306 >gi|319760995|ref|YP_004124932.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|330822857|ref|YP_004386160.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317115556|gb|ADU98044.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gi|329308229|gb|AEB82644.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 632 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 115/304 (37%), Gaps = 33/304 (10%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y + + I +FA L ++G G+ S + +GAY +L L + + Sbjct: 345 YATVLLTDVAIAALFAASLHFILGPGGMHSFGHAAYFGLGAYGAALLVRWLDLPMGAALL 404 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + + A ++ G ++ G YLA+ TL ++I + +W +T G G+ Sbjct: 405 LGPLAAAAGALVYGWFCVRLSGVYLAMLTLAFAQITWAVAFQWDGLTGGSNGLTGIWPPE 464 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + Y++ L + ++ + + A R RD+ Sbjct: 465 W------------------AAQGAAFYWLALALAAAGVYLLRRMLFAPLGWALRAARDSA 506 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 ++ + + +AF V+ G+AGA FA S+ ++PD +++ + +V+LGG Sbjct: 507 PRAEAIGIHVRRVQWAAFVVAGLLAGLAGALFAFSKGGVAPDALWVGKSVDGLVMVLLGG 566 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + L+ A + + Y+ L+ + +++L+ Sbjct: 567 VQQLAGPLVGAAAFTWLHDSVARATDYWRA---------------LLGGTMLVLVLLFPQ 611 Query: 338 SLLR 341 + Sbjct: 612 GISG 615 Score = 52.6 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 96/306 (31%), Gaps = 17/306 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--YGLSIWLLI 96 + + + A GLS++ G +++ Y +G ++ + + W + Sbjct: 10 LLNGLAGASTLFLVAAGLSLIFGVTRIVNFAHGSFYMLGLFAAYSCVEQLAGAIGFWPAL 69 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + G G ++ L L+ + L+ + ++ G ++ Sbjct: 70 LLAPLAVGLLGALVELLLLRRIYHASELLQLLATFALVLVIKDAALWLWGPEELFGPRAP 129 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 G + + +++ + + L L RT R + Sbjct: 130 GLAGA----------VDLLGRRFPAYDLFLIAVGPLVLVLLTLLLTRTRWGTLVRAATQD 179 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ +L + FA+ + G+ GA +V++G Sbjct: 180 REMVGALGVNQAWLFTGVFALGALLAGLGGALQLPREPA--SLELDMLTIGAAFVVVVVG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM S+ A ++ EL + + +F + + + LV++ R Sbjct: 238 GMGSIPGAFVAALLIA---ELKAVCIWLGVVQVGGVAVAFPKLTLVVEFLVMALVLVWRP 294 Query: 337 HSLLRL 342 L+ Sbjct: 295 WGLMGR 300 >gi|332286059|ref|YP_004417970.1| putative ABC transport protein, inner membrane component [Pusillimonas sp. T7-7] gi|330430012|gb|AEC21346.1| putative ABC transport protein, inner membrane component [Pusillimonas sp. T7-7] Length = 288 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 100/293 (34%), Gaps = 26/293 (8%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 Y + + GL+++ G + +++ +G Y +L + G+ ++ + A++ A G Sbjct: 18 YTIISLGLTLIFGVVRVVNFAHGDFLMVGMYLVYLLAAHVGIHPYVGLIPIAVVLFALGA 77 Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168 + ++ D + + IL+ + G + + TV Sbjct: 78 LTQKVIIEPLLDSDEHIQIFATVGLSTILLNLALVLFGANVFRASVQTGVSPITVGGFTM 137 Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228 +F + L+ + L++ RT + A R + ++ A + + Sbjct: 138 VSGQIITF-----------VVAIGLAVLLHLFMHRTYLGRALRAVAQHRYAALLMGVNVK 186 Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288 + AF + +AF+G+A A F IV+LGGM SL + Sbjct: 187 HVYIVAFGLGTAFVGIAAGLLAPQYPVFPTVGTYFVLT--AFVIVVLGGMGSLYGAVAGS 244 Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + L + L++++R + L Sbjct: 245 MIIGVIDTLAGYYI-------------APDLKEVVYFGIFLLILVVRPNGLFG 284 >gi|265993181|ref|ZP_06105738.1| LOW QUALITY PROTEIN: branched-chain amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|265999153|ref|ZP_06111582.1| LOW QUALITY PROTEIN: bacterial inner-membrane translocator [Brucella melitensis bv. 2 str. 63/9] gi|262764051|gb|EEZ10083.1| LOW QUALITY PROTEIN: branched-chain amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|263092451|gb|EEZ16704.1| LOW QUALITY PROTEIN: bacterial inner-membrane translocator [Brucella melitensis bv. 2 str. 63/9] Length = 299 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 18 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L A + + +I + G + Sbjct: 78 LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + A R + ++ A + + Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ + + + ++ L+++++ L Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285 >gi|328470843|gb|EGF41754.1| ribose ABC transporter permease protein [Vibrio parahaemolyticus 10329] Length = 322 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 24 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 82 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 83 LCGAFAASLIAMEVPVLIAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 130 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 131 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWYL 190 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 191 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 245 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 246 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 305 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 306 AKAVVILLAVLV 317 >gi|325262665|ref|ZP_08129401.1| ribose ABC transporter, permease protein [Clostridium sp. D5] gi|324031759|gb|EGB93038.1| ribose ABC transporter, permease protein [Clostridium sp. D5] Length = 338 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 107/313 (34%), Gaps = 26/313 (8%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + V++ +++ + A S I ++ ++ A G++ V+ G L L+ Sbjct: 30 VIIPTVLFMVIIAIVNPAFISMANIFNVLRSTGFTLITALGMTFVL-IAGGLDLSVGSVL 88 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+G ++ G IW+ I + + G + G+ +K R L + +M Sbjct: 89 ALGGCVSGMVMVNLGAPIWVAILLGCGVGFLIGFLNGIIIVKCRIPALIMTLGMMYMARG 148 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + I G+ + + + + V+L L Sbjct: 149 IVYIV-------TEGVPIYPLPVQFQAIEQQDVFG-------------IPKVILICIVLG 188 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A+ ++L++T + + + N++A + + + ++S ++G ++ Sbjct: 189 AAAHIFLKKTTVGRSIYAVGGNKEAARLSGINLDRTNIICYCITSTLAALSGIMMSSRLG 248 Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 P+ E ++ +++I GG+ ++ A + + + + Sbjct: 249 SAQPNGGTGYEMTVIAAVIIGGTSTNGGIGTILGTAIGALFMNVLSNAMTILKVSVYWQN 308 Query: 310 LKFDCSFNMRHTT 322 + Sbjct: 309 FVVGFILVLAVML 321 >gi|222083132|ref|YP_002542497.1| ribose ABC transporter [Agrobacterium radiobacter K84] gi|221727811|gb|ACM30900.1| ribose ABC transporter [Agrobacterium radiobacter K84] Length = 340 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 97/323 (30%), Gaps = 23/323 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R++ + + + ++ + + + +QI I + A G++ V+ G Sbjct: 21 IRISMKEAGVAIALILILAFFSATAPYFATPENFLKIFVQIAINTVLASGMTFVILVGG- 79 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + L+ A+ + LS W I ++++ S G I+G + Sbjct: 80 IDLSVGSLLALCTVIGATIMIDPRLSPWQAIVLASLASMGTGAILGAVNGWV-------- 131 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + ++ + V + + + F V IF+ Sbjct: 132 --CEKWKLPSFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWGVFPSIFLIA 189 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +++ + R T I N++A K++ F +S G+A Sbjct: 190 IIVVLIGWFVL-----RYTVFGRFVFAIGTNEEAVRLSGHEPKKYKVAVFTISGLTAGIA 244 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299 + + + + + I+ VI+GG S+ IL + Sbjct: 245 AMVYLLRLN-VGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIIGTLVGACILQVLSTGLQ 303 Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322 + + + Sbjct: 304 LLGADDNIKPIVIGAVIVLAVIL 326 >gi|83954599|ref|ZP_00963310.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83840883|gb|EAP80054.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] Length = 388 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 103/367 (28%), Gaps = 36/367 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + L L + + G + + L + A + +V G G+LSL Sbjct: 14 WFIALLGLFTLAVAIGSEATGTGLISTSMVKTLGKTLCLCLIAIAMDVVWGYCGILSLGH 73 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGLP 113 + IG Y+ + +L + + Sbjct: 74 FAFFGIGGYAIGMWLMYARTEGIVLSSLEGQVIPPTPQEVQDAIGNQIFGVVGSSDFPWL 133 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 +L + +++ ++ W + G+Y++ + + + Sbjct: 134 WAFSDSLFLQLLMVVIVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLWLFQNDSG 193 Query: 174 S------------------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 S + + L + W+ + + + IRD Sbjct: 194 LRGNNGLSGLQNIPGYEDTSQATISLVFFMGSALALALGYILFAWVVSGKMGSVVQGIRD 253 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ L + KL F +++ G+AGA + I+P +I + V + Sbjct: 254 NEARVRFLGYRVERYKLFIFTLTAVIAGIAGALYYPQAGIINPAEIAPIASIYLAVWVAI 313 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L A + + G N + + L+ ++ V L Sbjct: 314 GGRGRLYGAVIGAAFVSLLSSWFTGGGAPAINLGF-YTILWTDWWLVLLGVSFVCVTLFF 372 Query: 336 SHSLLRL 342 + L Sbjct: 373 PKGIGGL 379 >gi|221635490|ref|YP_002523366.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM 5159] gi|221158136|gb|ACM07254.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM 5159] Length = 289 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 100/303 (33%), Gaps = 26/303 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + +Y + A G +++ G L +++L Y G Y + R G + + Sbjct: 11 LNGLTLAALYFVVAIGFTLIFGVLRVVNLAHGSLYLFGGYVGWSVADRSGSWLLGALAAF 70 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + A ++ G L A + + + + Sbjct: 71 LVAGLAGLVLELGLLRPLHGQDLREALVTIGVSIIAADLMLAKWGG----------FTYD 120 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + ++ R P + Y + +VL L + + L RT + R D++ Sbjct: 121 FSPPEAITGGVRIPVLGIGYPKYRLFVLAFALALGVVLWMVLTRTRLGITVRAAIDDRDM 180 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 ++ + + FA+ + G+AG + S + ++ + +VI+GGM Sbjct: 181 VAAVGIDVQRVFAAMFAIGAGLAGLAGVVGGSVLSISSGEDARYLL--ASLIVVIVGGMG 238 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 SL A A ++ V + + F + + + LV+ +R L Sbjct: 239 SLPGTAVAAILVALVEQYSLAL--------------FPTYAAIVSFLLMVLVLAVRPQGL 284 Query: 340 LRL 342 Sbjct: 285 FGR 287 >gi|146342356|ref|YP_001207404.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146195162|emb|CAL79187.1| Putative Branched-chain amino acid ABC transporter (permease protein); livH-like protein [Bradyrhizobium sp. ORS278] Length = 290 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 26/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + IY + A GL+++ G L +++ + + + +RYG+ +L I Sbjct: 11 LLNGLMLGAIYALIALGLTLIYGVLHIVNFAHGALLTVAMFMVWLACARYGMDPYLAILF 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A A G + + L+++ I+ Sbjct: 71 VAPAMFALGYALQRFIIGPASHSKDNGILLVTLGLSIIIENALL-----------AAFRS 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + F ++ + + L L++T I A R + + Sbjct: 120 DTRTITTDYSFRVVELGPLLLSFPRVVGFGVTIATTLLLWLVLQQTDIGKAIRAVAKEKL 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + ++ FA+ A + +A S + ++ +IV+LGGM Sbjct: 180 GASLVGISVPHVYAMTFAIGCACLAVAAGLLMPSFYV--SPKTGAAFVLVAFTIVVLGGM 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V + + + + +L+R Sbjct: 238 GSIPGALIGGLLIGVVEAASSLFLGDSLGQIG-------------IFLIFIVTLLVRPTG 284 Query: 339 LLRLR 343 L R Sbjct: 285 LFGAR 289 >gi|323499252|ref|ZP_08104229.1| ribose ABC transporter permease protein [Vibrio sinaloensis DSM 21326] gi|323315640|gb|EGA68674.1| ribose ABC transporter permease protein [Vibrio sinaloensis DSM 21326] Length = 327 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAASLIAMEVPVLIAVPTALVAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + + +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFSDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWFL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIITSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|319780321|ref|YP_004139797.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166209|gb|ADV09747.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 293 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 97/306 (31%), Gaps = 30/306 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + + + A GLS+V G + ++++ + +GA + + G L + +I Sbjct: 15 LVTSAVLALTALGLSLVFGVMRVVNVAHGEFFMLGAVLAWAITTAIGGHPALGFLAALVI 74 Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + + L + + R +Y AT++ + I+ + G V Sbjct: 75 APLIVGAIALVAERLVLRRLNYNPEATIVATIGMLYIIQQLALTFYGPEARPVEPPFS-- 132 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 +R + Y + V+ L + L L RT I R + + + Sbjct: 133 ----------YRILLPWFGYSGYKLSVIAASALLLTATWLVLTRTRIGLVMRATQYDSET 182 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + FA+ + +A + ++ +VI+GG+ Sbjct: 183 AQAFGIPVGRVYGGVFALGAMLAAIAAVLIVPISQA--HYLMGQDPLLLSFIVVIIGGLG 240 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 SL A ++ + + + + +V++ R L Sbjct: 241 SLRGTVVAAVLIGLSDGIISMFFSPTLAK-------------IIATLLVAMVLVFRPQGL 287 Query: 340 LRLRTP 345 R+ Sbjct: 288 FGTRSR 293 >gi|298491150|ref|YP_003721327.1| inner-membrane translocator ['Nostoc azollae' 0708] gi|298233068|gb|ADI64204.1| inner-membrane translocator ['Nostoc azollae' 0708] Length = 289 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 83/288 (28%), Gaps = 13/288 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + I + A GL++ G L L + +GAY +++ + +I Sbjct: 10 IVNGISVGSIIALAAVGLTLTYGILRLSNFAHGDFLTLGAYLTLVVNTLGVNIWLSMILA 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A + L K R TLI+ I + ++ I + Sbjct: 70 VVGTVAAMLLAEKLLWSKMRSIRATSTTLIIISIGLALFLRNGIIFIWGGKNQNYNLPVT 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +VL + + L++T I A R + D+ Sbjct: 130 PA-----------LELGQIRVPQNQLWVLGLSIVAISLLHYLLQKTKIGKAMRAVADDLD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + L + + + G+ + + + + + VILGG+ Sbjct: 179 LARVSGINVDRVILWTWVIGGTLTSLGGSMYG--LITAVRPNMGWFLILPLFASVILGGI 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 + A I+ V E+ + + + + Sbjct: 237 GNPYGAITAAFIIGIVQEVSTPWLGSQYKQGIALLIMILVLLIRPKGL 284 >gi|126736281|ref|ZP_01752023.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. CCS2] gi|126714102|gb|EBA10971.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. CCS2] Length = 433 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 96/274 (35%), Gaps = 21/274 (7%) Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 I L PV +++ ++G +L R DYLAIATL ++EI +L + G + Sbjct: 160 PILLSWPVGGLLAAGAAWVIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLARGVKNV 219 Query: 151 YVADRLYFLGTTVRSLIRF---------FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 DR ++ F +S + +I + + + + Sbjct: 220 IGLDRPVPYEIDLQQDPGFVERAASLGLDPVTASTLYTKIGYAILFTIVLLIILWLAQKA 279 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + R IRDN+ A ++ + L F + SA G+AGA +++P + Sbjct: 280 LNSPWGRMMRAIRDNETAAEAMGKDVKGRHLQIFILGSAVCGVAGAMMTTLDGQLTPGTY 339 Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR- 319 + +V +VI+GG + ++ + + N L + Sbjct: 340 QPLRFTFLVWVMVIVGGSGNNFGAVLGGMLIWWLWVQVEPLGLGMMNILSSGLEDGSALK 399 Query: 320 ----------HTTLMVIALFLVILMRSHSLLRLR 343 M + L LV+ L+ R Sbjct: 400 ERMIDSAAHMRLLTMGVVLLLVLRFSPRGLIPER 433 Score = 41.4 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +L + G + + LI + A G+++ G GL ++ + A+G Sbjct: 9 ALFGLVAVLLIGTGMIQGWNSALLILNMGLISAIMALGVNLQWGFAGLFNIGVMGFVALG 68 Query: 78 AYSYVILGSRYGLSIWLL 95 + V++ + W Sbjct: 69 GLAAVLVSTDPVPEAWQA 86 >gi|188533806|ref|YP_001907603.1| Sugar ABC transporter permease component [Erwinia tasmaniensis Et1/99] gi|188028848|emb|CAO96710.1| Sugar ABC transporter permease component [Erwinia tasmaniensis Et1/99] Length = 345 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 97/330 (29%), Gaps = 27/330 (8%) Query: 7 RLNKYDKILCLLAVVYPLLLF---------LFLGATKSQKYIDSMGIQILIYVMFAWGLS 57 RL+KY ++ A+ + L S + + Q+ I + A G++ Sbjct: 20 RLHKYGIVIAFFALCLIVALVGEYQVSQGAWSDNYFFSDANMLIVLRQVSINGILAIGMT 79 Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 V+ + G + L+ A+ + + + + +G+ Sbjct: 80 FVIITAG-VDLSVGSVLALSGIVAARFATNNAGMAIGDTATAVLTPLIVALGIGIVCGLI 138 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 G LA L + +L + + G +L + Sbjct: 139 NGTVLARYRLQPFIVTMGMLSAARGLALLTTGGNPVSQLNNDFRWL------------GN 186 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 Y + ++ L L L +T + N K+ + +I K+ + + Sbjct: 187 GYVAAVPVPVIIFIALFGLAWLLLNKTIFGRYVYAVGGNAKSARTSGINVIRIKVLVYTL 246 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILI 292 +A G+AG A + E + ++VI GG+ +L I+ Sbjct: 247 CAALAGIAGLILTARTGSAQTNAGAGYELDAIAAVVIGGTSMAGGVGTLQGTLFGVLIIG 306 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + + + + + Sbjct: 307 VMNNGLDLLGVQSYYQQIIKGVLIVVAVLL 336 >gi|91786471|ref|YP_547423.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91695696|gb|ABE42525.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Polaromonas sp. JS666] Length = 304 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ GL+I+ G +G++++ IGAY+ + L+ + Sbjct: 18 LSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFSHLAEAYAPRLVQSYFLF 77 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++ + +L W + + + T Sbjct: 78 AIVAAFLLAFAVGWLAEWAF--IRHLYKRPLDTLLATWGLSLGMQQIFRSSFGAKEVSPT 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + P+ + I +V+ ++ ++L L R+ R N+ + Sbjct: 136 LPDWLMGSWAPAPGLDIPINGMFVMALTLVVTCGVLLALYRSRWGLRVRATVANRVMANA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA+ G+AGA A + + + +V GG SL Sbjct: 196 TGINTRKTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +L + ++++R L Sbjct: 254 GTVVSAFGIAQTQSIAEFFMTGSMAKVLTLMT-------------IVTILMLRPQGLFAA 300 Query: 343 R 343 + Sbjct: 301 K 301 >gi|56708884|ref|YP_164927.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56680569|gb|AAV97234.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 312 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 107/313 (34%), Gaps = 33/313 (10%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 ++ ++LI + A +++ G GLLSL AIGAY + + Sbjct: 16 VPYWLGGGALALVTEMLILLAIAQSWNLLAGFGGLLSLGHHAFVAIGAYLLFAVTRDLPI 75 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 S + +IP + + +++ + R Y A+ + +EI + ++ + Sbjct: 76 SPYAMIPFCGVGAALLALVLTPILFRLREVYFAVGMWVAAEIVKIVVSRMDYF------- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 L F + Y++ L + + WL R+ Sbjct: 129 ----------GASSGLPLFAARRIDTSLLPSMGYWLALALTAGLCVGLWWLGRSPWGLHV 178 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF-FAASRDRISPDMFKFSENIIV 269 +RD++ A SL K F +S+A GMAGA F S F + + Sbjct: 179 HAMRDDEIAARSLGVKTGRIKALLFILSAAGSGMAGAIGFMGSLYVSPIAAFDINWTVYA 238 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 I I ++GG+ ++ + + + E + + + + Sbjct: 239 IFICVIGGLGTIRGPVIGVMLFVALREALS---------------ASPGWNLIALGLIAM 283 Query: 330 LVILMRSHSLLRL 342 L+++ + L Sbjct: 284 LLMIFAPRGIDGL 296 >gi|332531525|ref|ZP_08407424.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] gi|332039026|gb|EGI75453.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624] Length = 292 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 98/306 (32%), Gaps = 24/306 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S +Y + A G + G ++ + +GA G + + + Sbjct: 7 LVSGLGLGSMYGLMALGFYVTYAVSGTVNFAQGSSMMLGAVLTYTFAQTLGWPGYAAVLL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ L +++ + + A L+ + +L T GK + L Sbjct: 67 ALALCAVYGLLVELLAVRPFVNRGSDAWLMATVALGIVLDNVVMATYGKEPRSLPSPLAQ 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + + L L+A++ L RRT A + N+ Sbjct: 127 SPIEVGG---------LGLGVYPLQLLIPLVGLTLAAALHLVSRRTRWGTAMLAVVQNRA 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + I A AFA+S+ F G+AG A + S + ++ ILGG+ Sbjct: 178 AARLMGIPIRRAVALAFALSALFAGIAGVLIAPLMNVHS--DMGTLFGLKAFAVAILGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 TS + A I V + L + + R + Sbjct: 236 TSAWGVMIAGLIFGLVEATITTTLG-------------SGYTQILTFALVIAALAWRPNG 282 Query: 339 LLRLRT 344 L Sbjct: 283 LFGRAE 288 >gi|118431260|ref|NP_147600.2| branched-chain amino acid ABC transporter, permease protein [Aeropyrum pernix K1] gi|116062583|dbj|BAA79908.2| branched-chain amino acid ABC transporter, permease protein [Aeropyrum pernix K1] Length = 387 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 101/334 (30%), Gaps = 33/334 (9%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-------ILGSRYGLSIWL 94 + + +Y + L++ G G+ + +A+G + S+ + Sbjct: 13 IVAYVAVYYVLTSSLNLKAGVTGIPDFGQAMFFAVGGIVVGNLAARIAAALAGMDPSLVI 72 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 + + P +AIA+ + +L + + + + Sbjct: 73 AENTTTLEVLNSEFFPNRPLESIAILVVAIASALALGGLLGLLASYPALRLRGDYLAIML 132 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVI-------------YEIFMYYVLLGMCFLSASIILWL 201 + + + + S+ + + + L + + L Sbjct: 133 LVTAEALRIYTTYSVWLMGSTPTVGLTLPSLLAWTGDPGLASILLTLAIAVAVYIYMERL 192 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF------AASRDR 255 + R +RD++ A +L + + +A V SA +AG + A S Sbjct: 193 YNSPAGRLMRAVRDDEDASKALGKDVAKVRRNAMVVGSALAALAGVLYSINPLLAGSSVA 252 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAK-----ATAILIGVVELCCGMNFYYFNSLL 310 + +++ILGGM+S +A AIL + + L Sbjct: 253 AVSIFDRMLWTFWPWALMILGGMSSNRGVAIASVVTGAAILGPIRLYKAELARLLRVDAL 312 Query: 311 KFDCS--FNMRHTTLMVIALFLVILMRSHSLLRL 342 FD L+ + ++ +R ++ Sbjct: 313 GFDTDKFAAGLEFILIGPLILAILFLRPQGIIPE 346 >gi|17548235|ref|NP_521575.1| amino-acid transmembrane lipoprotein ABC transporter [Ralstonia solanacearum GMI1000] gi|17430481|emb|CAD17165.1| probable amino-acid transmembrane lipoprotein abc transporter [Ralstonia solanacearum GMI1000] Length = 293 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 107/303 (35%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y +FA G ++V G LG+++L+ + +GAY+ + + + L +W + V Sbjct: 6 LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQFVAHFELPLWAALLV 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 SG G+I+ + L + +I Sbjct: 66 GFAASGVAGLIIDVL--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L+ V +++ L A+++L L+RT + A R I ++ K Sbjct: 118 NLRFPAGLVSDASLDLGGVHLTPLELGIIVLSFALMAALMLLLKRTQLGRALRAIAESPK 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L + L ++A G+AG + + P M + + + +++ILGG+ Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLAGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + L L + F LFL++L+R Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283 Query: 339 LLR 341 L Sbjct: 284 LFG 286 >gi|330937486|gb|EGH41443.1| inner-membrane translocator [Pseudomonas syringae pv. pisi str. 1704B] Length = 284 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 91/284 (32%), Gaps = 16/284 (5%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--------IWLLIPVSAMIS 103 A G ++V G +G+++ Y IG+Y + + + + + +++ Sbjct: 1 IAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPLLMIAGFAAAIIVT 60 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163 A G + + + + + LI + L ++ G + + L Sbjct: 61 SAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNFAIPNLL------- 113 Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223 + F + V+ V + + L++ R+ + A R ++ K L Sbjct: 114 PGSLSFGPGGAEEVLISYMQIVVFVVTLVAMTGLTLFISRSRMGRACRACAEDMKMANLL 173 Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283 F V +A +A + I+P+ F + + +LGG+ S+ Sbjct: 174 GINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAFTAAVLGGIGSIPG 232 Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 +L + + ++ F + I Sbjct: 233 AVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 276 >gi|241207280|ref|YP_002978376.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861170|gb|ACS58837.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 340 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 39/323 (12%), Positives = 95/323 (29%), Gaps = 23/323 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R++ + + + ++ + + + +QI I + A G++ V+ G Sbjct: 21 VRISLKEAGVAIALILILAFFSATAPYFATPENFLKIFVQIAINTVLAAGMTFVILVGG- 79 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + L+ A+ + S W I ++ + S G I+G Sbjct: 80 IDLSVGSLLALCTVIGATIMINPAFSPWQAIVLACLASMGTGAILGAV----------NG 129 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + ++ + V + + + F + IF+ Sbjct: 130 WICEKWKLPSFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWGIFPSIFLIA 189 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +++ + R T I N++A K++ F +S G+A Sbjct: 190 IVVVLIGWFVL-----RYTVFGRFVFAIGTNEEAVRLSGHEPKRYKIAVFTISGLTAGIA 244 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299 + + + + + I+ VI+GG S+ IL + Sbjct: 245 AMVYLLRLN-VGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIVGTLVGACILQVLSTGLQ 303 Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322 + + + Sbjct: 304 LLGADDNIKPIVIGAVIVLAVIL 326 >gi|225548145|ref|ZP_03769430.1| hypothetical protein RUMHYD_00124 [Blautia hydrogenotrophica DSM 10507] gi|225040676|gb|EEG50922.1| hypothetical protein RUMHYD_00124 [Blautia hydrogenotrophica DSM 10507] Length = 299 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 89/300 (29%), Gaps = 18/300 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 IY + A G ++V G + +++L +GA++ + L S +L + Sbjct: 12 LQVGSIYALLAIGYTLVYGIIKMINLAHADFMMLGAFTALFLCQWLTSSGVVLWLSILIA 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + R Y L +++ + + + Sbjct: 72 LLTMAIVGLIGVFVERVAY---KPLRNRPTLSSLVAAIGVSMFLQNFLRCIPAVGPTPQA 128 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + V+ C L A + + +TAI + ++ A Sbjct: 129 FPVMFTSGSLSLGPITVSAIQIVVIGVSCVLMAFMQFLVSKTAIGKQMVAVSCDKDASAL 188 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + SA + G +A+ I M + +LGG+ ++ Sbjct: 189 MGINVNKVISITFCIGSALAAVCGILYASVYPSIHVYMAT-TIGNKAFISAVLGGIGNIK 247 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 +L + + + + L LV+L R LL Sbjct: 248 GAMLGGLLLGMIEVMLQSFDSSISYGAS--------------FVILILVLLYRPAGLLGT 293 >gi|116074193|ref|ZP_01471455.1| putative membrane protein of ABC transport system [Synechococcus sp. RS9916] gi|116069498|gb|EAU75250.1| putative membrane protein of ABC transport system [Synechococcus sp. RS9916] Length = 375 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 97/341 (28%), Gaps = 31/341 (9%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L + ++ + ++ ++ + L + A G+ ++ G GLLSL I +A+G Sbjct: 13 LLLWVVIIAAIVAAPAVLSEFRLNLLGRFLALAIVALGIDLIWGFTGLLSLGQGIFFALG 72 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---- 133 Y+ + L + + +A ++ + Sbjct: 73 GYAAAMYLQLSSSGDLLNGIPEFFSLYGVSELPFFWHPFASPWFTLVAIWLVPGLLAAVL 132 Query: 134 -------------QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 +IL + + + + F + + Sbjct: 133 GGLVFRNRIKGVYFSILTQAALLVFYNFFNGQQKLINGTNGLQTPATKLFGQYVGSELMQ 192 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + ++V + L + + W+ R + IRD++ K F ++ A Sbjct: 193 RWFFWVTAVVVILVWAFLRWVVRGRFGDVLIAIRDDEPRLRFAGFNPTLFKTLVFGLAGA 252 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+ GA + SP + +I ++ V +GG +L + L Sbjct: 253 LAGIGGALYTVQSGSASPQFMEVPMSIDMVIWVAVGGRGTLVGAIFGAVGINYAKSLVSE 312 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + LV+ + Sbjct: 313 V--------------MPEGWLFIQGALFILVVTALPEGVFG 339 >gi|309790173|ref|ZP_07684745.1| putative branched-chain amino acid transport system / permease component [Oscillochloris trichoides DG6] gi|308227758|gb|EFO81414.1| putative branched-chain amino acid transport system / permease component [Oscillochloris trichoides DG6] Length = 374 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 100/317 (31%), Gaps = 22/317 (6%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 +L L+ + + FL + + + ++ QI + A G+ +V+ + G + L+ Sbjct: 63 RYGVLLLVVGMATVSFFLEPEVFLTWRNVSNIFRQISFNAILALGVFLVILTAG-IDLSV 121 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130 A+ + +L +++ + G G + GL R + I TL Sbjct: 122 GSILALAMMTAAVLARDGYPWPLIILAPI-ITGGLVGAVNGLGLTWLRLPHPFIMTLGT- 179 Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190 NI + +G I + FP SF + I Sbjct: 180 ---LNIARGLTNLISGGVPISGLPEPVRWLGAGNLRLANLDFPVSFAVVLI--------- 227 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + L+L T I N +A + + + V F G++G A Sbjct: 228 --CYILVSLFLTYTRTGRHIYAIGGNPQAARVSGINVDRTLVFVYTVCGMFAGLSGLLLA 285 Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 + P+ E + +++I GG ++ + ++ + + N Sbjct: 286 GRTNSGFPNAGVGQELDAISAVIIGGASFFGGRGTVLGVFAGALVIGLMRNILNLRNVPV 345 Query: 306 FNSLLKFDCSFNMRHTT 322 F + + Sbjct: 346 FWQQVLIGVVIIVVVAL 362 >gi|163735389|ref|ZP_02142823.1| ABC-type urea transport system, permease protein II [Roseobacter litoralis Och 149] gi|161391398|gb|EDQ15733.1| ABC-type urea transport system, permease protein II [Roseobacter litoralis Och 149] Length = 322 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 108/325 (33%), Gaps = 19/325 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + L L L + S Q+L Y +FA LS + G +G+L I + +G Sbjct: 7 ILLSIAFGLALLLAPLGLDDWRLSQLAQLLTYGLFALSLSFIWGQVGILCFGQAIFFGVG 66 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY ++ + + +++ + ++ ++ Sbjct: 67 AYVMALVTLGKFPMLGDSQLMGLLLATLAAGGVAFVLGL-----FLFGGRGITGAHLAVV 121 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + A A + G + + + Y+++ G+ L + Sbjct: 122 TLCAAVVIEIAAGRWAFIGGYNGLCGVPPLTTPWPREDIYLSGLETYFLVFGILVLVYFL 181 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +LWL +T+ IR N++ L + AKL AF +S G+AG FAA +S Sbjct: 182 LLWLTQTSFGTLLAAIRSNEERTRFLGFDVTIAKLFAFLLSGMVAGLAGGLFAAQFGFVS 241 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P + F+ + V+ V +GG GV+ + Sbjct: 242 PQLIGFALSTEVLIWVAVGGR--------------GVLLAAVAGALLVRWGEDQLSDQLG 287 Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342 + +++++ L Sbjct: 288 QYWLLATGLLFIVIVVVAPRGLFGR 312 >gi|163737020|ref|ZP_02144438.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107] gi|163740557|ref|ZP_02147951.1| inner-membrane translocator [Phaeobacter gallaeciensis 2.10] gi|161386415|gb|EDQ10790.1| inner-membrane translocator [Phaeobacter gallaeciensis 2.10] gi|161389624|gb|EDQ13975.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107] Length = 353 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 90/313 (28%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + L S + + Q+ I + A S+V+ + G + L+ Sbjct: 45 LIVLVLSVIVFGLLLGSKFFSPFALTLILQQVGIVGIVACAQSLVILTAG-IDLSVGAIM 103 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYGL + + + CG I G + + Sbjct: 104 VLSSVVMGQFTFRYGLPPEVAVACGLICGTICGFINGWLVARMKLPPFI----------- 152 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + I +Y A+ T F I Y ++ M L Sbjct: 153 -VTLGMWQIVLASNFLYSANETIRSQTIAAEAPLLQLFGEKIKIGGAVFTYGVIFMVILV 211 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + LR TA + D+ +A + +S + +S AG Sbjct: 212 VLLAYVLRHTAWGRHVYAVGDDPEAAELSGVKVTRVLISVYMLSGLICAFAGWAMIGRIG 271 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP + + + ++VI GG S+ I+ + + Sbjct: 272 SVSPTSGQLANIESITAVVIGGISLFGGRGSILGTFFGALIVGVFTLGLRLLGADAQWTY 331 Query: 310 LKFDCSFNMRHTT 322 L Sbjct: 332 LLIGLLIIAAVAV 344 >gi|83944048|ref|ZP_00956505.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] gi|83845295|gb|EAP83175.1| branched-chain amino acid ABC transporter, permease protein [Sulfitobacter sp. EE-36] Length = 388 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 103/367 (28%), Gaps = 36/367 (9%) Query: 11 YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70 + L L + + G + + L + A + +V G G+LSL Sbjct: 14 WFIALLGLFTLAVAIGSEATGTGLISTSMVKTLGKTLCLCLIAIAMDVVWGYCGILSLGH 73 Query: 71 VIAYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGLP 113 + IG Y+ + +L + + Sbjct: 74 FAFFGIGGYAIGMWLMYARTEGIVLSSLEGQVIPPTPQEVQDAIGNQIFGVVGSSDFPWL 133 Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 +L + +++ ++ W + G+Y++ + + + Sbjct: 134 WAFSDSLFLQLLMVVIVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLWLFQNDSG 193 Query: 174 S------------------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 S + + L + W+ + + + IRD Sbjct: 194 LRGNNGLSGLQNIPGYEDTSQGTISLVFFMGSALALALGYILFAWVVSGKMGSVVQGIRD 253 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N+ L + KL F +++ G+AGA + I+P +I + V + Sbjct: 254 NEARVRFLGYRVERYKLFIFTLTAVIAGIAGALYYPQAGIINPAEIAPIASIYLAVWVAI 313 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG L A + + G N + + L+ ++ V L Sbjct: 314 GGRGRLYGAVIGAAFVSLLSSWFTGGGAPAINLGF-YTILWTDWWLVLLGVSFVCVTLFF 372 Query: 336 SHSLLRL 342 + L Sbjct: 373 PKGIGGL 379 >gi|72384025|ref|YP_293379.1| inner-membrane translocator [Ralstonia eutropha JMP134] gi|72123368|gb|AAZ65522.1| inner-membrane translocator [Ralstonia eutropha JMP134] Length = 314 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 108/285 (37%), Gaps = 14/285 (4%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 L L L S + + I I+I + A L++++G GLLS AY Sbjct: 11 CIAGALLLMLPLAISSPFYLDLAIHIMIAALIATSLNMLLGLGGLLSFAQSALAGAAAYG 70 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 I G G W+L ++ ++ A +++G+ +L+ G + + TL ++++ + + W Sbjct: 71 VAIAGQHTGFGPWMLTAMAVSVAVAFSVVVGILALRTSGLSIGMITLAIAQVLWGVAMHW 130 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 +T G+ GI R + I + + L ++ Sbjct: 131 GSVTGGENGIAGIARPALPWMDTDNH--------------IVWFEFVAICFLLVLCLVNR 176 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 ++ + R + +L I +L AFA + +AG A + ISP Sbjct: 177 FMQSQLGRCLDGTRSQPRRMSALGFDIWGIRLFAFAFAGLVAAIAGVLLAFHQQFISPHA 236 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 E + +VI+GG +L I++G L G + Sbjct: 237 LSLGETAESLLMVIVGGPATLLGPVVGAVIVVGFRVLVSGYIESW 281 >gi|88809447|ref|ZP_01124955.1| putative membrane protein of ABC transport system [Synechococcus sp. WH 7805] gi|88786666|gb|EAR17825.1| putative membrane protein of ABC transport system [Synechococcus sp. WH 7805] Length = 375 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 88/321 (27%), Gaps = 31/321 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------GSRYGLS 91 + ++ + L + A G+ ++ G GLLSL I +A+G Y + S Sbjct: 33 FRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQGIFFALGGYGAAMYLQLNSSASHPNGI 92 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 P +L A L + K + Sbjct: 93 PEFFSLYGVDRLPFFWEPFYNPLFTLIAIWLVPALLAALLGNMVFRNRIKGVYFSILTQA 152 Query: 152 VADRLYFLGTTV-----------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + + + F + + +++ + L+ + W Sbjct: 153 ALLVFFNFFNGQQKLINGTNGLKTDVTKLFGQMVGSPEMQRWFFWITAVIVILAWLFVRW 212 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L R + IRD++ K FA++ G+ GA F +SP Sbjct: 213 LVRGRFGDVLIAIRDDEPRLRFTGYNPTLFKTIVFAIAGGLAGIGGALFTVQSGIVSPQY 272 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 +I ++ V +GG +L ++ L + Sbjct: 273 MAVPFSIEMVIWVAVGGRGTLVGAILGAVSIMYAKSLVSE--------------AMPQSW 318 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + LV+ ++ Sbjct: 319 LFIQGGLFILVVTALPEGVIG 339 >gi|170694983|ref|ZP_02886132.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|170140081|gb|EDT08260.1| inner-membrane translocator [Burkholderia graminis C4D1M] Length = 315 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 117/318 (36%), Gaps = 24/318 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + ++ + A GL++V+ LG+L+ Y +GAY GL W + Sbjct: 8 LFNGISYGMLLFLMAAGLTLVLSMLGMLNFAHPAFYMLGAYFSYTFAQLLGLGYWCGLFA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G ++ L+ + + L+++ ++++ + GK + A Sbjct: 68 APLCCALIGGLVERYLLRRVIQFGILGPLLLTFGLGIVIVESVTLLWGKHSVPYAVPAS- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F F + Y + + L+ + + L+ T I R + + Sbjct: 127 --------LDFTLFSLYGIDYSAYRAFTLVVTIAVLGVLYGLLKGTRIGTTVRASLSHPE 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L + + + FA+ SA G+AGA + +++ +V++GG+ Sbjct: 179 MVNALGHNLPRLRTNVFALGSALAGLAGALSGNIIGTEPGMAAQLGGILMI--VVVVGGL 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT-------------TLMV 325 SL+ + ++ + L + + L+ F+ T + Sbjct: 237 GSLAGAFVSALLIGILQTLTVSTPLSWSDFLMPVQHVFSGIATNEALTQPVSRFAPLVPF 296 Query: 326 IALFLVILMRSHSLLRLR 343 + +V+ +R L+ R Sbjct: 297 AIVIVVLAIRPRGLMGRR 314 >gi|295110632|emb|CBL24585.1| Branched-chain amino acid ABC-type transport system, permease components [Ruminococcus obeum A2-162] Length = 291 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 91/309 (29%), Gaps = 26/309 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S + +Y +F G++I+ G + ++ + G Y + S GL+ + IP Sbjct: 9 LISGVLAGGVYALFGVGITIIFGVMKMVDFSACAQLIWGMYFTYLFYSWTGLNCYWAIPF 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + GA ++ ++ + ++++ L G Sbjct: 69 VVVCMGALSWVIFKLIVRPLLGSDDTSFILVTLGLSYFLQNLAEFVFGADPKS------- 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V S I+ + M L + + L +T + A R + + Sbjct: 122 ----VPSEIKTSSIIIGDYSIGLPRLIAFFAMIILVLGVYMLLNKTTLGRAMRATSEKPE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L AF + F G++G F + VI+GG+ Sbjct: 178 VAQMLGINTKKTFTIAFMIGVIFAGISGLLITPLYYVTPTAGNMFRTTAYI--AVIIGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + + L GM + + +AL +V+ +R Sbjct: 236 GDIKGALVGGLAVGVIEALVTGMISNDLGPVG-------------VCVALLVVLYLRPQG 282 Query: 339 LLRLRTPSN 347 Sbjct: 283 FFGKGERRA 291 >gi|72162181|ref|YP_289838.1| ABC transporter permease [Thermobifida fusca YX] gi|71915913|gb|AAZ55815.1| ABC transporter permease protein [Thermobifida fusca YX] Length = 357 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 112/295 (37%), Gaps = 17/295 (5%) Query: 46 ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105 + ++ GL ++VG+ G +SL IGAY+ + + I V ++ G Sbjct: 65 VGYLMLAIAGLQLLVGASGQISLGHGAFMFIGAYATALTVLHAPMVPLAAIMVLTVVVGC 124 Query: 106 CG-MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 +++G + + G YLA ATL ++ + + + + G G+ R Sbjct: 125 LAGIVVGAATARLHGPYLAGATLALAVGLPALALYFSDVLGGSNGLLFKMRGAPPEL--- 181 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + V + +V+ ++ ++ L R + R IRD++ A Sbjct: 182 ---------AGLVTDNQWKAWVIWFTVLVALVVLATLSRGRLGRRLRAIRDDEAAAAMAG 232 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + K++AF +S+ +AGA A +P F + ++ +++ ++LGG+ SL Sbjct: 233 IPVGRTKVTAFVISAGCGSLAGACEAYLLGTATPSSFSLALSLSLLAALVLGGLGSLWGA 292 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 L+ + + S + L ++++ + Sbjct: 293 FWGALALVYLELAGKELADLLGLS----SSVADNVPLVFFGTLLIVIVMAWPMGI 343 >gi|27383043|ref|NP_774572.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27356217|dbj|BAC53197.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 291 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 80/274 (29%), Gaps = 13/274 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S +Y + A G +V + +++ +G + GL+ W+ Sbjct: 8 LVSGVALGCVYGLIALGFVLVYKATEVVNFAQGDLMMLGGFFAFTFIGMMGLNYWIGFAG 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + GM+ ++ Y + ++ + L + G Sbjct: 68 AVAAMALFGMLAERVVVRPILGYPQFSIIMATIGLGYFLRSIAGMIWGTD---------- 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + ++ V+ L + L+ RT + A R +N Sbjct: 118 -DLKIETPFSQGVLRIGSLVLAYDKLSVIAATMILCTLLWLFFNRTTLGTAMRASSENML 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + +A+S+A AG A S + +LGG Sbjct: 177 AAYYMGIPVKRVVSIVWAISAAVATCAGVLLAPITFIHS--NVGLVLGLKAFPAAVLGGF 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 S+ ++ + + + + + Sbjct: 235 GSIPGAVVGGVLIGVIESMAGFYLAEGWKDVAPY 268 >gi|330971014|gb|EGH71080.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str. M302273PT] Length = 284 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 91/283 (32%), Gaps = 16/283 (5%) Query: 53 AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--------IWLLIPVSAMISG 104 A G ++V G +G+++ Y IG+Y + + + + + +++ Sbjct: 2 AIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPLLMIAGFAAAIIVTS 61 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 A G + + + + + LI + L ++ G + + L Sbjct: 62 AYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNFAIPNLL-------P 114 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + F + V+ V + + L++ R+ + A R ++ K L Sbjct: 115 GSLSFGPGGAEEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRACRACAEDMKMANLLG 174 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 F V +A +A + I+P+ F + + +LGG+ S+ Sbjct: 175 INTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAFTAAVLGGIGSIPGA 233 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 +L + + ++ F + I Sbjct: 234 VLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 276 >gi|89071304|ref|ZP_01158466.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] gi|89043184|gb|EAR49419.1| branched-chain amino acid ABC transporter, permease protein [Oceanicola granulosus HTCC2516] Length = 433 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 95/270 (35%), Gaps = 21/270 (7%) Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 PV +++ I+G +L R DYLAIATL ++EI +L ++ G + Sbjct: 164 AWPVGGLLAAGAAWIIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLSRGVKNVSGLP 223 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF---------LSASIILWLRRTA 205 R ++ F + + + + + + + + L + + Sbjct: 224 RPLPYEIDLQQDPAFLERAAGWGVDPVTASTIYVKLGYGVLFAVVLVLLLVLAQLALNSP 283 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS- 264 R IRDN+ A ++ + L F + SA G+AGA +++P ++ Sbjct: 284 WGRMMRAIRDNETAAEAMGKDVTRRHLQIFILGSAVCGIAGAMMTTLDGQLTPASYQPLR 343 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR----- 319 +V +VI+GG + ++ + + + + + Sbjct: 344 FTFLVWVMVIVGGSGNNFGAVLGGMLIWWLWVQVEPIGLALMSGIAALMPEGSALAGHLL 403 Query: 320 ------HTTLMVIALFLVILMRSHSLLRLR 343 M + L LV+ L+ R Sbjct: 404 DSAAHMRLLTMGVILLLVLRFSPRGLVPER 433 >gi|291279354|ref|YP_003496189.1| branched-chain amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754056|dbj|BAI80433.1| branched-chain amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 287 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 96/309 (31%), Gaps = 26/309 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +++ S IYV+ A G +I+ + G+++ IG S + + Sbjct: 2 QFLYSGLTTGSIYVLVAIGFNIIYNTTGIVNFAQGEFVMIGGMLIYTALSLLEIPTGISF 61 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + S G++ L I + ++ IL I G+ + VA + Sbjct: 62 LLTIVGSYVLGILTERIFLNNVKLKTEINLITITLAVAIILRGSAMIIWGRDSLKVAPYI 121 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V+L ++ + L+ + + A+R ++ Sbjct: 122 NESVFKMPG-----------GVITTSSLLVILVSIIIAVILSLFFKFSKYGKAFRACHND 170 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 A + ++ K+ +FA++ + G+AG + S +LG Sbjct: 171 PYAALNCGISVNKIKMLSFAIAGSLGGIAGILITPITFV--TYNDGIMTGLKGFSAAVLG 228 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S + +L + + + F + Sbjct: 229 GLGSFTGAITGGYLLAILEGFFATILPSGYKDAFAFIILLIILFVL-------------P 275 Query: 337 HSLLRLRTP 345 + L + Sbjct: 276 NGLFGKKRA 284 >gi|91790962|ref|YP_551913.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91700842|gb|ABE47015.1| inner-membrane translocator [Polaromonas sp. JS666] Length = 320 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 116/318 (36%), Gaps = 19/318 (5%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + + + + + FL ++ QI+I+ +FA L + + Sbjct: 1 MKPIPISPARLRAVEVVFWLALGASFFLLPDK-------LTLMSQIMIFGLFAVSLDMAL 53 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G++++ + GAY+ +L + + ++ ++ A G + ++ Sbjct: 54 GYAGIITVGHAAFFGAGAYAAGLLAKHGWSEPFSGLLLALLVCTALGYALSYLVVRGADL 113 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 + T+ + + + + PIT G G+ G F ++ Sbjct: 114 TRLMITIGVCVLLAELANRLAPITGGSDGLQGVTIAPVFGI------------FEFDLFG 161 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + + + + + R+ R I D++K ++ + + A+A+S+ Sbjct: 162 RTAFVYAYCIVLVMFLGVRLVLRSPFGLTLRGIHDSRKRMLAIGSPVDARLRMAYALSAG 221 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA A + + + F+ + V+ I++LGG L + + V + Sbjct: 222 VAGIAGALLAQTTQFVGLESIGFNRSAEVMIILVLGGTGRLYGGLIGAIVYMLVHDWFAN 281 Query: 301 MNFYYFNSLLKFDCSFNM 318 +N ++ L + Sbjct: 282 LNPEFWMFWLGIFLISAV 299 >gi|262370829|ref|ZP_06064153.1| branched chain amino acid ABC transporter permease [Acinetobacter johnsonii SH046] gi|262314191|gb|EEY95234.1| branched chain amino acid ABC transporter permease [Acinetobacter johnsonii SH046] Length = 543 Score = 69.1 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 30/291 (10%), Positives = 89/291 (30%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ IGAY+ ++ S + + + + + ++ Sbjct: 270 ITYGLLGVINMAHGELIMIGAYTTYVVQSLFKTYLGSYVDWYLIAAIPAAFLVSALIGML 329 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + + S + S + Sbjct: 330 IER--TVIRPLYGRQLETLLATFGVSLILMQLVRMIFGAQNVEVSNISWLSGGIALSPSL 387 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + +++ + ++ L +T R + N++ ++ + AF + Sbjct: 388 MLPYNRIAIIVFTVAVLLLLVYLLNKTRFGLFVRAVTQNRQMARAVGIRSSRIDMLAFGL 447 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A + + + ++ +V + + Sbjct: 448 GSGLAGLAGCALAQVGNVGPDLGQNYIIDAFLVVVVG--------------GVGQVWGAV 493 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + ++L+ + L+ + + L I R L ++ Sbjct: 494 LAALGLGISGTVLEIGMGAVLAKIILL-VLVILFIQKRPQGLFAIKGRFVE 543 >gi|118588800|ref|ZP_01546208.1| inner-membrane translocator [Stappia aggregata IAM 12614] gi|118438786|gb|EAV45419.1| inner-membrane translocator [Stappia aggregata IAM 12614] Length = 360 Score = 69.1 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 91/313 (29%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + L S + + Q+ I + A SIV+ + G + L+ Sbjct: 52 LIVLVISLVVFGLLLGSKLFSPFALTLILQQVQIVGIVAAAQSIVILTAG-IDLSVGAIM 110 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYGL + + I + CG + G + + + + Sbjct: 111 VLSSVVMGQFTFRYGLPVEISIVCGLICGTLCGYLNGFLVAIVKLPPFIVTLGMWQIVLA 170 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + T I L F + + Y ++ M L Sbjct: 171 TNFLYSANETIRSQEIAEVAPLLQF------------FGNKVNVGGAIFTYGVIFMVVLV 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + LR+TA + D+ +A + +S + +S AG Sbjct: 219 MVLAYALRQTAWGRHVYAVGDDPEAAQLSGVQVKKVLISVYMLSGLICAFAGWAMIGRIG 278 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP + + + ++VI GG S+ I+ + + Sbjct: 279 SVSPTTGQLANIESITAVVIGGISLFGGRGSVLGTLFGALIVGVFTLSLRLLGADAQWTY 338 Query: 310 LKFDCSFNMRHTT 322 L Sbjct: 339 LLIGILIIGAVAI 351 >gi|331699976|ref|YP_004336215.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326954665|gb|AEA28362.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 329 Score = 69.1 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 111/303 (36%), Gaps = 33/303 (10%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + + Y + A G +++VG G++S+ + A G Y++ IL + + Sbjct: 43 PFDLRVLTLVAAYAIAAVGFNVLVGFAGVVSIGNSLFLAAGGYAWAILAVP--RGPLVAL 100 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +++ ++ GL L+ R Y A+ TL + + ++ W +TNG AGI A L Sbjct: 101 LAGVVVAVVIAVLAGLALLRLRAYYFAVGTLALGALGTVVMRNWTSVTNGDAGITGAGYL 160 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++ + + + + LR + + A R + Sbjct: 161 KLF----------------GLTGVSSIFAAAVLLLAVFLYLQEALRTSPLGLAMIVGRFD 204 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +L + +++AF +S+ + GA A PD F + I ++ I I+G Sbjct: 205 PPVADALGVNVSRTRVAAFVLSAVSAAVGGALVAQLAGGAFPDQFSTTAAISLLVIPIIG 264 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G ++I E ++ Y + + + LV L Sbjct: 265 GRGWRWAPVVGAIVVIAAPEYLRFLDEY---------------RLAVYGVLVTLVALFLP 309 Query: 337 HSL 339 + Sbjct: 310 GGI 312 >gi|307154957|ref|YP_003890341.1| inner-membrane translocator [Cyanothece sp. PCC 7822] gi|306985185|gb|ADN17066.1| inner-membrane translocator [Cyanothece sp. PCC 7822] Length = 287 Score = 69.1 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 89/303 (29%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + + A GL++ G L L + +GAY + +I Sbjct: 7 LFNGLAIGSVIALAAVGLTLSYGILRLSNFAHGDFMTLGAYITWLANINGLNLWLSIILG 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + A + L R + TLI+ I + I+ + D Sbjct: 67 AGGTVIAMLVSEYLIWKPMRDRRASSTTLIIISIGLALFIRNGILFIWGGSNQRYDLPVM 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V + + L++T I A R + DN Sbjct: 127 AAMDLLG-----------VKVAFDRVLAITMAIIAIIVLHFLLQKTKIGKAMRAVADNVD 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + L + ++ + GA F I + + + + VILGG+ Sbjct: 176 LARVSGINVEWVVLWTWIITGVLTAIGGAIFGLIVGGI-RPNMGWFLILPMFASVILGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + ++ EL + + ++ + +++L+R Sbjct: 235 GNPYGAIAGALVIGVAQEL-------------SVPWLGSDYKLGVALLIMIVILLVRPQG 281 Query: 339 LLR 341 L R Sbjct: 282 LFR 284 >gi|229011268|ref|ZP_04168461.1| Branched chain amino acid ABC transporter, permease [Bacillus mycoides DSM 2048] gi|228750151|gb|EEL99983.1| Branched chain amino acid ABC transporter, permease [Bacillus mycoides DSM 2048] Length = 286 Score = 69.1 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 116/301 (38%), Gaps = 31/301 (10%) Query: 54 WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIM 110 +++G G++S + + IGAY +L R + ++ I + ++S I+ Sbjct: 1 MSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFFIGIAAAIIVSAIVSYII 60 Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170 GL SL+ + + A+ TL +S++F + KW+ +T+G G F Sbjct: 61 GLLSLRLKSHFYAMLTLAISQLFFVLAEKWRSLTHGGDGFTFRVPDIFRDRF-------- 112 Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 YY+ ++ +++I + I N++ +L ++ Sbjct: 113 -----------TFYYITFICLISIFILLRLFTKSSIGKVLKAISQNEQRVEALGYKVLHY 161 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 K+ A V+ ++G F + ++ +F + + + ++GG+ +L Sbjct: 162 KIIASVVAGVVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLI-------- 213 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350 + + Y+ S L + R T ++ + +V+L+ L+ + Sbjct: 214 -GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKGLVGTVKKLKNFK 272 Query: 351 R 351 R Sbjct: 273 R 273 >gi|149188639|ref|ZP_01866931.1| ribose ABC transporter permease protein [Vibrio shilonii AK1] gi|148837549|gb|EDL54494.1| ribose ABC transporter permease protein [Vibrio shilonii AK1] Length = 326 Score = 69.1 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 28 LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 86 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 87 LCGAFAASLIAMEVPVLIAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 134 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 135 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYAMGIPVPVWIMVIVFAAAWYL 194 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 195 L-----NHTRFGRYVYALGGNESATRLSGINVDKVKIGVYAICGLLAALAGIIVTSRLSS 249 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 250 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 309 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 310 AKAVVILLAVLV 321 >gi|170741681|ref|YP_001770336.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168195955|gb|ACA17902.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 301 Score = 69.1 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 96/300 (32%), Gaps = 17/300 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I Y M + GL+I+ G L +++ + + A+ I ++ G + + Sbjct: 17 LIAGCFYAMLSMGLAIIFGLLNIINFTHGAQFMMAAFLAWIGLTQVGPWLGMPEFQIGFW 76 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + +L + L + L + +L+ + + G++ Sbjct: 77 PALLVAPLCVAALGMAVERLLLRRLSHLDHLYGLLLTF-GVALVTEGLFRHAYGVSGQGY 135 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 F++ + +V+ + S RT + R +N + + Sbjct: 136 EPPESLQGPVDVGFMLLPKYRVFVVGASLLICLSTWYAFERTRLGAYLRAGTENPRLLQA 195 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + A+ A G+AG A IV ++V++GG+ S+ Sbjct: 196 FGINVPLMITLAYGFGVALAGLAGVLAAPIMQVTPLMGGSILN--IVFAVVVIGGLGSIL 253 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L V + + + T ++ + + LV+L+R L Sbjct: 254 GAMVTGLGLGLVEGVTKVV--------------YPEASTVVIFVIMALVLLLRPAGLFGR 299 >gi|226953359|ref|ZP_03823823.1| branched chain amino acid ABC transporter permease [Acinetobacter sp. ATCC 27244] gi|226835897|gb|EEH68280.1| branched chain amino acid ABC transporter permease [Acinetobacter sp. ATCC 27244] Length = 544 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 30/291 (10%), Positives = 88/291 (30%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ IGAY+ ++ S + L+ + + ++ Sbjct: 271 ITYGLLGVINMAHGELIMIGAYTTYVVQSFFKTHFVGLVDWYLLAAIPAAFLVSALIGML 330 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + + S + + + Sbjct: 331 IER--TVIRPLYGRQLETLLATFGVSLILMQLVRMVFGAQNVEVSNVSWLSGGIALTPSL 388 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + ++ L +T R + N++ ++ + AF + Sbjct: 389 MLPYNRIAIIAFTIAVLLLLVFLLNKTRFGLFVRAVTQNRQMARAVGIRSARIDMLAFGL 448 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A + + + ++ +V + + Sbjct: 449 GSGLAGLAGCALAQVGNVGPDLGQNYIIDAFLVVVVG--------------GVGQVWGAV 494 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + ++L+ + L+ + + L I R L ++ Sbjct: 495 LAALGLGISGTVLEIGMGAVLAKIILL-VLVILFIQKRPQGLFAIKGRFVE 544 >gi|220936270|ref|YP_002515169.1| urea ABC transporter, permease protein UrtB [Thioalkalivibrio sp. HL-EbGR7] gi|219997580|gb|ACL74182.1| urea ABC transporter, permease protein UrtB [Thioalkalivibrio sp. HL-EbGR7] Length = 307 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 98/301 (32%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ A GL+I+ G + ++++ IGAY+ ++ S I + Sbjct: 21 LSFFSVLLLMALGLAIIYGQMRVINMAHGEFMVIGAYTTYMISSLVATHAPWAIDYYIFL 80 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + I + + + +L W + + Sbjct: 81 AIPLAFIAAFLVGL--FIEVVMIRHLYHRPLDTLLATWGLALIMQQIFRSTFGAREVSPR 138 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + ++ P+ + I +++ F++ ++ ++ ++ R +++ + Sbjct: 139 LPDWLQGSWQPTPMIDIPINGMSIMVLTLFVTIAVFWFMFKSRWGLRVRCTMASREMSGA 198 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + FAV G+AGA A + + + +V+ GG SL Sbjct: 199 VGINTKWVDRITFAVGCGIAGIAGA--AFTTISSTGPTSGTLYIVDTFLVVVFGGAASLL 256 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + ++ L + +++A+ +++++R L Sbjct: 257 GTVASAFVIAQGQSLLEFFLGASMAKVS-------------ILLAVIVILMLRPEGLFAS 303 Query: 343 R 343 + Sbjct: 304 K 304 >gi|126664340|ref|ZP_01735324.1| inner-membrane translocator [Marinobacter sp. ELB17] gi|126630666|gb|EBA01280.1| inner-membrane translocator [Marinobacter sp. ELB17] Length = 289 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL+IV G L +++ Y +GAY L + G+ W + + Sbjct: 8 LLNSLDIGLLLFIIAVGLNIVFGVLNIINFAHGALYMLGAYLAFTLINIVGMPFWAALLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++ L++ +L+++ I+ + + G V Sbjct: 68 APLGVAILAVLIDRFLLRYIYSRDIADSLLLTFALLLIINESVRMIWGSGIQVVQPP--- 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +V++ L A + RT I R ++ Sbjct: 125 -------QLLAGSMDIMGSSIPTYSLFVIVMGLALLAGLWFLFNRTRIGRIMRAAALDRD 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L FA + + G A R I +V++GG+ Sbjct: 178 MAEVLCINTRLVVTGVFAFGAWLAAVGGVIAAP--MRALDPGMGDKIIIESFIVVVIGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S IL + F + L + + LV+L + + Sbjct: 236 GSFPGALLGAIILGLIHGFGGRY--------------FPEVNMLLPFLGMALVLLFKPNG 281 Query: 339 LLR 341 ++ Sbjct: 282 IMG 284 >gi|187925881|ref|YP_001897523.1| branched-chain amino acid ABC transporter inner membrane protein [Burkholderia phytofirmans PsJN] gi|187717075|gb|ACD18299.1| inner-membrane translocator [Burkholderia phytofirmans PsJN] Length = 294 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 106/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGFS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W+++ ++ ++ G G+ + L++ + L+++ ++ G Sbjct: 63 YFGLPYWVMLVLAPLVVGLFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLAVCFATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGINVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + L + T++ + Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLLLGVIEGLTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFG 291 >gi|254505813|ref|ZP_05117959.1| ribose high-affinity ABC transporter permease component [Vibrio parahaemolyticus 16] gi|219551466|gb|EED28445.1| ribose high-affinity ABC transporter permease component [Vibrio parahaemolyticus 16] Length = 327 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAASLIAMEVPVLIAVPTALVAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWFL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIITSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|91978749|ref|YP_571408.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91685205|gb|ABE41507.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 357 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 100/320 (31%), Gaps = 17/320 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 +L + + Y LI++ A GL ++ G G+LS + + + Y+ Sbjct: 21 FLVVLAGALIYPVFADSYDVGNFSYFLIWIFMALGLCLIWGYGGMLSFGQTLFFGVAGYA 80 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140 Y +L G + A++ ++ L + + I + + + + Sbjct: 81 YGVLAINMGGG---TTTIVALVVSVVIAMIAAGILGYFMIWGGINGIFFGIVTLSATLVL 137 Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 AG L S I +YY+++G+ + + Sbjct: 138 AFFLGQTAGPEWRIGDARLNGFNGMKGMDPLAIGSVYIEGSALYYLMVGLIVVVYLALRM 197 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 L + + N R+N + L + +L F + S G++GA + + I+P Sbjct: 198 LVNSGVGNVIVATRENPQRAEMLGYDVRKYQLLTFVIGSGLAGLSGALYTSWGQFITPSS 257 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 + I V G L+ + +L+ + + Sbjct: 258 IGLPAAAMPIVWVAFSGRNDLTATLVGSFLLLFGFQTITVYS--------------QQAA 303 Query: 321 TTLMVIALFLVILMRSHSLL 340 LM L ++ + Sbjct: 304 LVLMGALLLATVMAAPQGFV 323 >gi|323492277|ref|ZP_08097435.1| ribose ABC transporter permease protein [Vibrio brasiliensis LMG 20546] gi|323313590|gb|EGA66696.1| ribose ABC transporter permease protein [Vibrio brasiliensis LMG 20546] Length = 327 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAASLIAMEVPVLIAVPTALLAGAALGAISGVIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|153011797|ref|YP_001373010.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] gi|151563685|gb|ABS17181.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188] Length = 295 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 96/306 (31%), Gaps = 22/306 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A GL++V +GL++ Y +GL L + Sbjct: 8 LVNALSLGGTYALLALGLAVVFSIMGLINFAHGELMTAAGYGL-CFALLFGLPFGLATVL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ A ++M + + L+ S IL V + Sbjct: 67 AMAVAIALVLLMERTAFRPVRGASGTTLLLTSFAVSAILRVLFQNFISARPKPVPMPMSL 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 GT + + +L + + L+LR T + A R ++ Sbjct: 127 SGT----------IEIGGLNIGVIQAISILVTVIMLVGLNLFLRTTVLGRAMRAAAEDFA 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + +AFA+S G+AG + A R + P M F + I+GG+ Sbjct: 177 IVRLMGIRANAVVATAFAISGLLAGVAGILWVAQRGSVDPLM-GFLPVLKAFIAAIIGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SLS +L + + ++ + V+L Sbjct: 236 GSLSGAVAGGFLLGFIEVFLQAY----------LPENLISYRDAFTILLVIAVLLFAPQG 285 Query: 339 LLRLRT 344 LL +T Sbjct: 286 LLARKT 291 >gi|311742144|ref|ZP_07715954.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter permease protein [Aeromicrobium marinum DSM 15272] gi|311314637|gb|EFQ84544.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter permease protein [Aeromicrobium marinum DSM 15272] Length = 298 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 95/306 (31%), Gaps = 19/306 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Q IY + A G ++ S ++S IG +GL W+ + + Sbjct: 8 VVNGFGQGSIYALLALGYVMIYKSTKVISFAQPALMVIGGLFAYHFTREFGLPFWIGMAL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + GMI+ +L+ I++ +L G V Sbjct: 68 AIVAGAIVGMIVERLALRPMIGKPVFTLAIITIGVDIVLRIISNRYIGVESRIVTYP--- 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 R + ++ ++ L+ R + A R +Q+ Sbjct: 125 --------NGSNRISIGEISITQQRLGLIAVTAVTVVALGLFFRYSRTGLAMRATALDQE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + A+A++ +AG F A I D + + + +I+GG+ Sbjct: 177 TALAQGIRVGVIFALAWAIAGGLAAIAGTFVATGAAGI--DQNTWIIALKALPAIIIGGL 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + V L Y L N + LV+L+R + Sbjct: 235 DSLQGAVIGGLAVGLVEALTATYQPDYAPWLG------NNFALVAPYALMLLVLLVRPYG 288 Query: 339 LLRLRT 344 L + Sbjct: 289 LFGTKE 294 >gi|186477791|ref|YP_001859261.1| inner-membrane translocator [Burkholderia phymatum STM815] gi|184194250|gb|ACC72215.1| inner-membrane translocator [Burkholderia phymatum STM815] Length = 294 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLTWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + L W+++ ++ ++ G G+ + L++ + L+++ ++ G Sbjct: 63 YFSLPYWVMLVLAPVLVGLFGVAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLIVCFATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMVTLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLLLGVIEGFTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFG 291 >gi|89070734|ref|ZP_01157996.1| probable transmembrane abc transporter protein [Oceanicola granulosus HTCC2516] gi|89043692|gb|EAR49897.1| probable transmembrane abc transporter protein [Oceanicola granulosus HTCC2516] Length = 327 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 58/333 (17%), Positives = 129/333 (38%), Gaps = 26/333 (7%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + + ++L + +G Y +ILI ++F L +V+G G+ +L Sbjct: 11 RRPLLAGRGLLWEAVILAVGVGLFFLFPYDLGFLSRILIMIVFVLSLDLVLGYAGVATLG 70 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 Y GAY+ ++ S L + A+ + GL ++ G L + ++ + Sbjct: 71 QAAMYGTGAYAAGLIAIHVTASPLLGLAAGAVAGAGIAFVSGLVLMRAHGLTLLMLSIAV 130 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 +++ Q + K +P+T G G+ LG I Y+ +L Sbjct: 131 AQVLQEVANKARPLTGGADGLRGIRMDPILGLWEFDFIGRAG------------YWYVLT 178 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + L + + + + + R I+++ + ++ T + + + + ++ G+AGA Sbjct: 179 VLILVLLFLKVVVNSPLGLSARGIQESPERMRAIGTPVYWRLVWIYTIAGGIAGVAGALA 238 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 A +S ++F F + + +++LGG L AI + V + ++ + + Sbjct: 239 AQVTALVSLEVFNFDHSAEALIMLVLGGAGRLYGAVVGVAIFMLVEHVAAAVDPFNW--- 295 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 L+ + V+ LL L Sbjct: 296 -----------LFLIGALVLAVVFFVPAGLLGL 317 >gi|327481918|gb|AEA85228.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 295 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 105/316 (33%), Gaps = 26/316 (8%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L + + + I Y + + GL+I+ G L +++ Y +GA+ + Sbjct: 3 LLFGVPLSVLLGQLLLGLINGAFYALLSLGLAIIFGLLRIINFAHGAQYMLGAFVAFLGL 62 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + G+S W + ++ ++ G GM + L+ + L+++ I+ Sbjct: 63 NYLGVSYWFALVLAPLLVGCLGMAIERGLLRRIAGEDHLYGLLLTFGLALIVEGSFVKLF 122 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G +G + F F+ + +V++ + + + RT Sbjct: 123 GVSGSSYPMP----------ELLRGGFNLGFMFLPTYRAWVIVAALVVCLATWYVIERTR 172 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + + R +N K + + A AG A + Sbjct: 173 LGSYLRAGTENPKLMQGFGINVPLLVTLTYGYGVALAAFAGVLAAP--IYAVTPGMGSNL 230 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 I+V ++V++GGM S+ + + L + T++ Sbjct: 231 LIVVFAVVVIGGMGSILGAIVTGIAMGLIEGLTKVF--------------YPEAANTVVF 276 Query: 326 IALFLVILMRSHSLLR 341 + + V+L+R L Sbjct: 277 LVMVAVLLIRPAGLFG 292 >gi|163801644|ref|ZP_02195542.1| ribose ABC transporter permease protein [Vibrio sp. AND4] gi|159174561|gb|EDP59363.1| ribose ABC transporter permease protein [Vibrio sp. AND4] Length = 327 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 29/312 (9%), Positives = 88/312 (28%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + + + + + + F Sbjct: 88 LCGAFAASMIALEVPVLIAVPTALFAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F Y + + + M + A Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISAGFTDTADAFAWFG-----TGYALGIPVPVWMMVVVFA 190 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ L T + N+ A + K+ +A+ +AG + Sbjct: 191 AVWYLLNHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLSALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYFQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLI 322 >gi|119387818|ref|YP_918852.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119378393|gb|ABL73156.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Paracoccus denitrificans PD1222] Length = 303 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 107/307 (34%), Gaps = 15/307 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + ++ + A GL++V G +GL++L Y GA++ + + G L+ Sbjct: 8 LNGLQYGMMLFLMAAGLTLVFGVMGLINLAHGSLYMTGAFACAAVAAATGSFWLGLVASL 67 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 A + A ++ + L + +L + I G + L Sbjct: 68 AAAAAAGALVEIAVIRR----------LYARDHLDQVLATFALILVFSEGTRWLFGSFPL 117 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + + Y +F ++ ++ + + RT + R +++ Sbjct: 118 YLKLPAALSGAVVLPGGLHYPLFRLVIIGFGAAVAVGLWWLITRTRLGIRIRAGEADREM 177 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L I FA+ +A G+AGA + I+ +V++GG+ Sbjct: 178 IGALGVDIARLYTIVFALGAALAGLAGALVGTIQSV--QVGMGEPVLILAFVVVVIGGIG 235 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---MRHTTLMVIALFLVILMRS 336 S+ ++ L + + + + + L+ + + +V+++R Sbjct: 236 SIKGALVGALLVGMTDTLGKALLPGLLSRVWDASSANTIGASLASVLIYVLMAVVLILRP 295 Query: 337 HSLLRLR 343 L R Sbjct: 296 QGLFGAR 302 >gi|254512692|ref|ZP_05124758.1| inner-membrane translocator [Rhodobacteraceae bacterium KLH11] gi|221532691|gb|EEE35686.1| inner-membrane translocator [Rhodobacteraceae bacterium KLH11] Length = 335 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 97/316 (30%), Gaps = 21/316 (6%) Query: 11 YDKILCLLAVVYPLLLF-LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 Y K+L +++ L+ F + + ++ + + A ++V+ G + L+ Sbjct: 22 YQKLLAFASLIVLLIGFSIASPNFMQTSNMIAILQATSVNGVLAVAATLVI-ITGGIDLS 80 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 A ++ + G+ + L + + CG+ G K + Sbjct: 81 VGTLMTFCAVIAGVVLTYMGMPLLLGVAAAIASGAFCGLCSGTFVAKMKIPPFIAT---- 136 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + I G + + R + T V+ + +L Sbjct: 137 --------LGMMLILKGLSLVISGTRPIYFNDTPGFDQISRGSLIGEVVPAFPIPNGVLI 188 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ + L RT + + N++A K+ +A++ A G+ G Sbjct: 189 LFLVAIAASYILGRTVLGRYTFALGSNEEAVRLSGVNTDAWKMRVYALAGAICGIGGILI 248 Query: 250 AASRDRISPDMFKFSENIIVISIVILGG------MTSLSKIAKATAILIGVVELCCGMNF 303 A+ + + I+ V++GG ++ I+ + ++ Sbjct: 249 ASRLNSAQ-PALGLGYELEAIAAVVIGGTSLSGGRGTILGTLIGALIMAVLTNGLRVLSV 307 Query: 304 YYFNSLLKFDCSFNMR 319 + + Sbjct: 308 AQEWQTVVTGAIIILA 323 >gi|149203678|ref|ZP_01880647.1| inner-membrane translocator [Roseovarius sp. TM1035] gi|149142795|gb|EDM30837.1| inner-membrane translocator [Roseovarius sp. TM1035] Length = 306 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 106/305 (34%), Gaps = 15/305 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + ++ + A GL+++ G +GL++L Y IGA++ W+ Sbjct: 11 LNGLQFGVMLFLMAAGLTLIFGVMGLINLAHGSLYMIGAFAAA----------WVAGLTG 60 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + + + + L I L + +L + I G + L Sbjct: 61 SFLLALAASLAAAAVAGVLIELLVIRRLYDRDHLDQVLATFALILILSEGTRWVFGSFPL 120 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + Y + ++ ++A++ + +T + R ++++ Sbjct: 121 YLDTPDWLSGTLRLPFGIDYSRYRLAIIGAGLVIAAALFAMISKTRLGIRIRAGENDREM 180 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L I FA+ +A G+AGA A + I+ ++++GG+ Sbjct: 181 IAALGVNISALYTLVFALGAALAGLAGALIGAIQSV--QVGMGEPVLILAFVVIVIGGIG 238 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM---RHTTLMVIALFLVILMRS 336 S+ ++ L + F + L+ + ++ + + I + V++ R Sbjct: 239 SIKGAFIGALLVGLTDTLGRALLPSAFATFLEPAAANSVGASLASMAIYILMAGVLIFRP 298 Query: 337 HSLLR 341 L Sbjct: 299 RGLFG 303 >gi|146280812|ref|YP_001170965.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145569017|gb|ABP78123.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|327479080|gb|AEA82390.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 295 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 110/304 (36%), Gaps = 26/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + I Y M + GL+I+ G L +++ Y IGA++ +L + G+ W + + Sbjct: 16 LLIGLINGSFYAMLSLGLAIIFGMLKIINFAHGAQYMIGAFAGYLLLATLGIGYWPALIL 75 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ G C ++ +L + + +L+ + L G +G A Sbjct: 76 APIVVGLCSAVIERLALSRLYNLDHLYSLLFTFGLALALEGAFRYFYGSSGQPYAVP--- 132 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F+ + +V+L + + L + +T + R +N Sbjct: 133 -------KELAGGYNLGFMFLPKYRAWVVLASLVICIASWLLIEKTKLGAYLRAATENPT 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + + +A G+AG A + + I+V ++V++GGM Sbjct: 186 LVRTFGINVPLLLTFTYGMGAALAGLAGMLAAPIYQV--SPLMGSNLIIVVFAVVVVGGM 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + L + ++ + + +V+L+R Sbjct: 244 GSILGAIITGYLLGILEGLTKVF--------------YPEASNIVIFVIMAIVLLVRPAG 289 Query: 339 LLRL 342 L+ Sbjct: 290 LMGR 293 >gi|125974326|ref|YP_001038236.1| inner-membrane translocator [Clostridium thermocellum ATCC 27405] gi|256003454|ref|ZP_05428444.1| urea ABC transporter, permease protein UrtB [Clostridium thermocellum DSM 2360] gi|281418382|ref|ZP_06249402.1| urea ABC transporter, permease protein UrtB [Clostridium thermocellum JW20] gi|125714551|gb|ABN53043.1| urea ABC transporter membrane protein [Clostridium thermocellum ATCC 27405] gi|255992478|gb|EEU02570.1| urea ABC transporter, permease protein UrtB [Clostridium thermocellum DSM 2360] gi|281409784|gb|EFB40042.1| urea ABC transporter, permease protein UrtB [Clostridium thermocellum JW20] gi|316941473|gb|ADU75507.1| urea ABC transporter, permease protein UrtB [Clostridium thermocellum DSM 1313] Length = 302 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 32/284 (11%), Positives = 78/284 (27%), Gaps = 16/284 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G + ++++ IGAY+ ++ + + + I+ + + Sbjct: 27 ITFGLMRIINMAHGEMIMIGAYTTYMVQNLFISFLGERYFDLYFIAA-IPLSFLITGFVG 85 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 ++I + ++L W + + + + Sbjct: 86 YLLEISIVKRLYGRTLDSLLATWGISLILQQLARNIFGAPNVDVRSPRWLNGGVVVFGNI 145 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 +++L A + L+L ++ R + N+ SL FA+ Sbjct: 146 QLPYKRLFIILLAALCIAGVYLFLFKSDSGRRIRAVMQNRSMAESLGINTRKVDSMTFAI 205 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG + + +V+LGG+ + A + Sbjct: 206 GSGLAGIAGCALTLLGSI--GPTLGTNYIVDTFMVVVLGGVGRIIGTVAGAAAIGIGNTT 263 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 L+ +A+ L + + Sbjct: 264 FEYFTNASLGK-------------VLVFLAVILFLQWKPQGFFS 294 >gi|182677964|ref|YP_001832110.1| urea ABC transporter, permease protein UrtB [Beijerinckia indica subsp. indica ATCC 9039] gi|182633847|gb|ACB94621.1| urea ABC transporter, permease protein UrtB [Beijerinckia indica subsp. indica ATCC 9039] Length = 308 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 96/298 (32%), Gaps = 17/298 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I I+V+ A GL+I+ G +G++++ +GAY + + + + L + + Sbjct: 22 LILFSIFVLMALGLAIIFGQMGVINMAHGEFMILGAYMTYLTSNLFQTYLPSLYSIYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A + ++ + +L W + +G Sbjct: 82 AMAVAFLASGALGLLVEW--SMIRFLYKRPLDTLLATWGLSLILQQSYRSIFGAREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + +I +V+ ++ S+ L L R++ R + N+ + Sbjct: 140 LPPWMMGSLPVTGTIEVQINGLFVMGLTVVITLSVYLLLYRSSWGKQVRAVMQNRVMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + G+AG+ F + + +V+ GG SL Sbjct: 200 VGINTEKTDRYTFGLGCGIAGIAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAQSLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + + L ++ + +++++R L Sbjct: 258 GVIASAFTISQAQSTLEFFLSGSMAK-------------VLTLLGVVVILMIRPQGLF 302 >gi|196234611|ref|ZP_03133430.1| inner-membrane translocator [Chthoniobacter flavus Ellin428] gi|196221315|gb|EDY15866.1| inner-membrane translocator [Chthoniobacter flavus Ellin428] Length = 243 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 74/181 (40%), Gaps = 15/181 (8%) Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 ++ F I + + G+ ++ ++ L + + + D++ A Sbjct: 70 RVIFQTSDTFGAATGLTGIPTLTSFAWAWGLAAVTVYVVASLVNSTYGRGFIAVHDDEIA 129 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 ++ + K++AF V + F G+AG ++ + ISP F F ++I ++ +VILGGM Sbjct: 130 ASAMGINPVRYKVTAFVVGAFFAGIAGGLYSHHKAVISPGGFDFLKSIEIVVMVILGGMG 189 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + A +L + EL G++ Y + + + ++L R L Sbjct: 190 RTVGVILAAVLLTILPELLRGVSEY---------------RMIIYSLLIIAIMLTRPQGL 234 Query: 340 L 340 Sbjct: 235 F 235 >gi|89901166|ref|YP_523637.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89345903|gb|ABD70106.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 429 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 111/330 (33%), Gaps = 31/330 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ L+ L + +M Q+ I ++ +I++G G+LS + + Sbjct: 16 VVIWTLFALVLLTAPLLFTSSLSQTMLSQMGIAIIVCLSYNILLGQGGMLSFGHAVYSGM 75 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD----YLAIATLIMSEI 132 G++ + ++ L + + + G M + + A+ TL + E+ Sbjct: 76 GSFLAIHTLNQVSGGWPLPVSLVPIAGGLASMAVAILLGWVTTKKAATPFAMITLGIGEL 135 Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 + + + G+ G+ + + + +I +YY++ F Sbjct: 136 VWAMSLMFPEFFGGEGGVS------------GNRVAGAKTFGISYGPQIELYYLIAVYTF 183 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 + ++ RT + +RDN + + + AF +++ F G++G A + Sbjct: 184 ICTGLMFAFTRTPLGRMLNAVRDNPERVEFVGYDTQKVRYIAFIIAAFFAGISGGLAALN 243 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + ++ ++ + + LGG T +++ L + Sbjct: 244 FEIVTSEVVSGYRSGAYLLFTFLGGATFFFGPIIGAILMVLAFVLLSEFTKAW------- 296 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + +++ + L Sbjct: 297 --------LLYLGLVFLFMVMYAPGGVASL 318 >gi|111220205|ref|YP_710999.1| high-affinity branched-chain amino acid ABC transporter membrane protein [Frankia alni ACN14a] gi|111147737|emb|CAJ59396.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Frankia alni ACN14a] Length = 365 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 88/319 (27%), Gaps = 22/319 (6%) Query: 32 ATKSQKYIDSM--GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----SYVIL 84 Q + ++ + +Y + A G ++V G L L++ + +G++ + +L Sbjct: 57 GFLDQFWQLTIDGLMVGSLYAVIALGYTLVYGVLQLINFAHSEVFMLGSFGGLFVARALL 116 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + L + G + G + S LI + Sbjct: 117 PDDGSVPGGLASVGLVAVGLGAGAVCGGLAAFTLERVAYRPLRRRSAPRLAYLISAIGAS 176 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 + + F + + + + T Sbjct: 177 LFAVNLAGKEFGRQNVDLPDLFHNGTVFTVFGADVSTQSLVIFAVAVAMLIGLDRLVAGT 236 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 + R + + + + + F V G G +A + + F Sbjct: 237 RLGQGIRAVAQDADTAVLMGVNVERIIIVTFVVGGLLAGAGGFLYAMTFNA--SYSMGFV 294 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324 + + +LGG+ ++ +L V + + ++ F Sbjct: 295 PGVKAFTAAVLGGIGNVRGAMLGGLLLGLVESYGGYLFQASYKDVIAF------------ 342 Query: 325 VIALFLVILMRSHSLLRLR 343 + L ++++R LL R Sbjct: 343 -LVLVAILMIRPSGLLGER 360 >gi|78060708|ref|YP_367283.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77965258|gb|ABB06639.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia sp. 383] Length = 315 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 113/330 (34%), Gaps = 39/330 (11%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 ++L L Y ++ I I I M A L V+ +G L+ + +GAY+ Sbjct: 12 AVVLATVLSVAAGSGYAGNLVIWIAIAAMMASSLRFVL-LIGELNFAVAAFFGLGAYASG 70 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + L + + S +++ + G +L+ +G Y + +E + + + + Sbjct: 71 AATTLWQLPFAIALLASGVVALLVSAVFGYVTLRVKGPYFLLIGFAFTEALRILYTRSEW 130 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + G +G+ LG + ++ + + ++ W+ Sbjct: 131 L-GGNSGMVGIFPPALLGDCFPT--------------------FVVAVAGVLILLLAWIE 169 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + + + IRDN S+ + K+ F ++S GMAGA A S + ISP F Sbjct: 170 HSHVGRVFVAIRDNDNVVRSVGIPVHAMKVLCFCIASFVTGMAGALQAFSNNVISPLDFG 229 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F + ++ + +GG + L F Sbjct: 230 FMLSTFALAYLKVGGERHALGP---------------VVGAVLLVLLASVAQRFGGGEQI 274 Query: 323 LMVIALFLVILMRSHSLLR--LRTPSNFLE 350 A+ +L + R + ++ Sbjct: 275 FYGAAIVFGVLFMPDGVTGWLARRRTVRVK 304 >gi|288959301|ref|YP_003449642.1| inner-membrane translocator [Azospirillum sp. B510] gi|288911609|dbj|BAI73098.1| inner-membrane translocator [Azospirillum sp. B510] Length = 291 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 86/307 (28%), Gaps = 27/307 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ S IY + G SI+ + +++ IG + L + ++ Sbjct: 7 QYLLSGLTIGAIYALAGLGFSIIYNASHVINFAQGEFIMIGGMASATLTASGVPLPLAIL 66 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + R +I + + + Sbjct: 67 IGCGGAMLVGVLVAKFAVERARDASTVTLIIITIGASIFLRGVAELVWG----------- 115 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + +V+ L +I L+ +T A N Sbjct: 116 -KDFKRLDAFSGETPIQFLGASMQPQSLWVVGTAGVLIVAIGLFFAKTLTGKAILATSHN 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + + L++FA+S+A + GA A S + + +LG Sbjct: 175 RLAAQLVGIDVKRVVLASFALSAALGAVGGAVVAP--ITFSYTEMGIMLGLKGFTAAVLG 232 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ I+ L G + + F + + V+L Sbjct: 233 GLGHGPGAVAGGLIVGVAEALGAGYISSAYKDAVAF-------------VIILAVLLFMP 279 Query: 337 HSLLRLR 343 + L R Sbjct: 280 NGLFGKR 286 >gi|254475686|ref|ZP_05089072.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria sp. R11] gi|214029929|gb|EEB70764.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria sp. R11] Length = 343 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 111/336 (33%), Gaps = 17/336 (5%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 RL Y L + A+ L + A+ + + + ++I+ + A GL++V G + ++ Sbjct: 19 RLAPYAPFLLVPALAVAGFLAVQNPASWLTLTVSGLAMGMMIF-IMASGLTLVFGLMDVI 77 Query: 67 SLNCVIAYAIGAYS-YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + ++GA+ +L + ++ + ++ + A + + + + Sbjct: 78 NFGHGAFVSVGAFVGISVLLALGQMTGAPSLGLNLLAVLAAVLAAMAATATMGWAFERVI 137 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + ++ + + R E + Sbjct: 138 VKPVYGNHLSQILVTMGGLIIAEQLIIVLWGPEEIYFTRPETLKGALTFGDAAIEKYRLV 197 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + + A++ LRRT I R N + +L + + F SA G+ Sbjct: 198 AVGVGLVVFAAMRFVLRRTKIGLIVRAGVQNGEMVAALGYRLRLVFVGVFIAGSALAGLG 257 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 G + ++ I+ M I++ +VI+GG+ S+ ++ + + Sbjct: 258 GVMWGLYQEVITAHM-GNQAMILIFIVVIIGGLGSVEGCFVGALLVGLLQNYIAFVE--- 313 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + +++ R ++ Sbjct: 314 -----------PKLALISNIALMVAILMWRPMGMIP 338 >gi|159044066|ref|YP_001532860.1| hypothetical protein Dshi_1517 [Dinoroseobacter shibae DFL 12] gi|157911826|gb|ABV93259.1| hypothetical protein Dshi_1517 [Dinoroseobacter shibae DFL 12] Length = 434 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 113/345 (32%), Gaps = 22/345 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 VV L L + A Y ++ + L+ L A+ Sbjct: 91 VVLALFWGLIVLAGSILLYQRMAPGRMRTLALIVVLLAGFFSYRALFDPAVAAIEAVNP- 149 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 + GL + L P+ ++GA ++G +L R DYLAIATL ++EI ++ Sbjct: 150 AGTGYLGGLGLPVLLAWPIGGALAGAAAWVVGKAALGLRSDYLAIATLGIAEIVIAVMKN 209 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 ++ G + R +++ F +S+ + +++ + + + Sbjct: 210 EDWLSRGVKNVVSIPRPVPYEIDLQNDPDFVARMTSWGYDPVVASSIVVKLAYAGLFAAV 269 Query: 200 WLR---------RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 L R+ R IRDN+ A ++ + L F + SA G+AGA Sbjct: 270 LLALLWLLEMALRSPWGRMMRAIRDNETAAEAMGKDVKKRHLQIFVMGSAICGVAGAMLV 329 Query: 251 AS-RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 I ++ +VI+GG + ++ + M + Sbjct: 330 TMESQLIPSSYQPLRFTFLIWVMVIVGGSGNNWGAILGGFLIWFLWIQVEPMGQQLMALI 389 Query: 310 LKFDCSFNMR-----------HTTLMVIALFLVILMRSHSLLRLR 343 + M I L LV+ L+ + Sbjct: 390 TAGMEDGSALKEHLIESAAHMRLLTMGIVLLLVLRFSPRGLIPEK 434 Score = 39.9 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 37/92 (40%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L LL + G +S ++ LI + A G+++ G GL ++ + A+ Sbjct: 8 LGLFGIVALLIVATGVIQSWNVALTILNYGLISAVMALGVNMQWGYAGLFNVGIMGFAAL 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108 G + V++ W + +++ G+ Sbjct: 68 GGLAVVLVSMPPVGEAWSAGGLRVVLALFWGL 99 >gi|332283961|ref|YP_004415872.1| putative ABC transport protein, inner membrane component [Pusillimonas sp. T7-7] gi|330427914|gb|AEC19248.1| putative ABC transport protein, inner membrane component [Pusillimonas sp. T7-7] Length = 310 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 96/305 (31%), Gaps = 7/305 (2%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +GL++ +GA L + + + Sbjct: 8 LINGITVGSVYALVALGYTMVYGIIGLINFAHGDVVMVGAMVATTLVAAFLGADP-GSTS 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + ++ + A + + + + Sbjct: 67 AWLAVTGALLLAIPLCMALGWIAERFAYRPLRRAPRLAALITAIGVSIIIQNVAMMVWGR 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +I F + ++L + A ++L + RT + A R N++ Sbjct: 127 NYLSFPHIIEPNIFQLGGARISLLQIIIILSATAIMAGLLLVVHRTRLGTAMRATAQNRE 186 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + I +AF + SA +AG ++ F + + +LGG+ Sbjct: 187 VAGLMGVNINTVISAAFLIGSALAAVAGVMVTTYYG-VAQYTMGFMLGLKAFTAAVLGGI 245 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L +L + L G N + + I L LV++ R Sbjct: 246 GNLGGAMLGGLLLGIIESLGAGYIGDLTNGVFG-----SNYQDVFSFIVLILVLVFRPSG 300 Query: 339 LLRLR 343 LL R Sbjct: 301 LLGER 305 >gi|223938438|ref|ZP_03630331.1| inner-membrane translocator [bacterium Ellin514] gi|223892857|gb|EEF59325.1| inner-membrane translocator [bacterium Ellin514] Length = 296 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 93/293 (31%), Gaps = 16/293 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS----IWL 94 + + IY + A G ++V G L ++ + +GA++ + R L Sbjct: 8 LINGLSLGAIYGLIALGYTMVYGVLRFINFAHSDVFMVGAFAGYYISKRLPHESLGGGLL 67 Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 ++ + +I G+I+ + + + + LI + +L G Sbjct: 68 VLAAAMVICALLGIIIERLAYRPLRNRSKLNVLITAIGVSLLLENAGQFFFGAN------ 121 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214 F + I S +F+ ++L + + +T I A R + Sbjct: 122 PKPFPSLFPVTSINLCGLILSSNQIAVFIVTIVLLVTLQFIVL-----KTKIGTAMRAVS 176 Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274 N A + F + SA G ++ + I P M + + Sbjct: 177 FNPLAASLVGINNDVVISFTFGLGSALAAAGGILYSLNYQAIDPLM-GILPGLKAFVAAV 235 Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 LGG+ ++ A +L + G F + + F + + Sbjct: 236 LGGIGNIPGAALGGLLLGVIETFVNGSRFSTYTDAIAFALLILILLFRPAGLL 288 >gi|163854850|ref|YP_001629148.1| branched chain amino acid ABC transporter permease [Bordetella petrii DSM 12804] gi|163258578|emb|CAP40877.1| probable branched-chain amino acid transport system, permease component [Bordetella petrii] Length = 304 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 96/308 (31%), Gaps = 15/308 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL++V G + +++L Y GAY R Sbjct: 8 LLNGLQFGLMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRT---------- 57 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ + + + + + L + + +L + I + + Sbjct: 58 GSFVAAVLVAALATGLVGVVLELVLVRRLAVRDHLAQVLGTYAIILIANDLVKMIWGPAP 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + ++Y + ++ + + ++ RT R N++ Sbjct: 118 VMLNLPAALSGPVRLLPDLMYPAYRLVIIACGLAAAVGLYWFVTRTRAGVLVRAGASNRQ 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + L FA+ + +AGA I+V+ +++GG+ Sbjct: 178 MATLMGVRVPLLFLGVFALGAMLAAVAGALLGP--ITAVQIGMGEEILILVLVCIVIGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMR 335 S+ ++ V +L + + + V++ R Sbjct: 236 GSIRGAFVGALLVGMVDTAGRAFLPMLLREVLPPAMASSLAATLAAISIYLLMAGVLVFR 295 Query: 336 SHSLLRLR 343 L R Sbjct: 296 PAGLFPAR 303 >gi|146633|gb|AAA83884.1| leucine-specific binding protein [Escherichia coli str. K-12 substr. W3110] Length = 308 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 96/312 (30%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R ++ K L F + +A +AG I+P F + Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ + IL L + ++ F L Sbjct: 244 TAAVLGGIGGIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALP-------------IL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|311696548|gb|ADP99421.1| urea ABC transporter, permease protein UrtB [marine bacterium HP15] Length = 308 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 95/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 ++V+ A GL+I+ G +G++++ +GAY+ + + + L + Sbjct: 22 LSLFSVFVLMALGLAIIFGQMGVINMAHGEFMILGAYTTYLTSGFFQSYLPSLFGGYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++ F + + +L W + +G Sbjct: 82 AMVLAFLICAALGAFVEW--LMIRRLYHRPLDTLLATWGLSLIMQQAYRSIFGAREVGVD 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + V I +V++ ++ + + R+ R + N+ + Sbjct: 140 LPEWMMGAIQVTDLVELPINGLFVMIIALSIAVGVYFLMYRSGYGKKVRAVVQNRPMAEA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + FA+ G+AGA F + + + +V+ GG SL Sbjct: 200 VGINSAGIDRATFALGCGIAGVAGAAFTMIGS--TGPSSGQAYIVDTFLVVVFGGAQSLI 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++ + ++++R L+ L Sbjct: 258 GTIVSAFGISQAQSTMEFFLSGSMAK-------------VLTLLVVVGILMLRPEGLMAL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|310778133|ref|YP_003966466.1| ribose ABC transporter membrane protein [Ilyobacter polytropus DSM 2926] gi|309747456|gb|ADO82118.1| ribose ABC transporter membrane protein [Ilyobacter polytropus DSM 2926] Length = 322 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 96/312 (30%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + +++ +L+ S + ++ Q I + + G++ V+ G + L+ A Sbjct: 23 FIGLLIFAVLVSFMNPRFLSASNMLNVLRQTSINAIISAGMTFVI-LTGGIDLSVGSILA 81 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 L + + L I VS +I G GM+ G+ + + M+ Sbjct: 82 FCGAISASLMASGQNAF-LAIAVSLVIGGILGMLSGMFISYGKLQAFITTLVTMT----- 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G ++ + +G + + + + +Y + + Sbjct: 136 -------LMRGATLVFTDGKPISIGFGDNTSLFGSIGAGNILGIPTPIYIMAVVYGVSYY 188 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + T + N++A + K +A+S +AG A Sbjct: 189 VL----NHTKFGRYVYAVGGNEEATKLSGINVDKVKTKVYAISGVLSALAGIVVTARLFS 244 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V + GG+ ++ I+ + +N + L+ Sbjct: 245 AQPTAGSGYELDAIAAVVLGGTSLAGGIGRITGTITGALIIGVLGNALNLLNVSSYYQLM 304 Query: 311 KFDCSFNMRHTT 322 Sbjct: 305 IKALVILAAVLM 316 >gi|158520851|ref|YP_001528721.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3] gi|158509677|gb|ABW66644.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3] Length = 300 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 96/320 (30%), Gaps = 26/320 (8%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 + +++ + IY M A G +I+ S G+++ +G V L L Sbjct: 6 PFSDFLQFLFMGVQRGCIYAMVAMGFNIIYNSTGIINFAQGEFVVLGGLMMVTLTMASHL 65 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + ++A+ A G++M ++ + + +I++ ++ + G Sbjct: 66 PMPVAFLLTAVFVMAVGVLMERTTINPVKNPSVLRLIIITIAVSILIRGIAMLVWG---- 121 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 +R +++ + + + T + Sbjct: 122 -------KESHHMRHFSSEESINVLGATILPQTLWIIGMLVVTVGVFVYFFNYTMTGKSM 174 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R N+ A + +FA+S+ +AG + Sbjct: 175 RACAINRDAARLAGINDRKMIMLSFALSAGIGAIAGIIITPVIQM--DYARGALLGLKGF 232 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 ++GG+ + A +L + + G ++ L + Sbjct: 233 GAAVVGGLGNSFGAVAAGLLLGIIEAMAAGYISSHYMDAAAL-------------FILLI 279 Query: 331 VILMRSHSLLRLRTPSNFLE 350 V+ +R L R + F E Sbjct: 280 VLFVRPSGLFGNREAARFKE 299 >gi|84687109|ref|ZP_01014991.1| probable amino-acid transmembrane lipoprotein abc transporter [Maritimibacter alkaliphilus HTCC2654] gi|84664880|gb|EAQ11362.1| probable amino-acid transmembrane lipoprotein abc transporter [Rhodobacterales bacterium HTCC2654] Length = 296 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 10/288 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y +F+ G +++ G LL+ + GA+ + + Sbjct: 6 ILNGLVSGSVYALFSLGFTLIFGVQKLLNFAHGATFMAGAFIAYYCTISGLPFLLAIGFS 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +I + R L+ + I Sbjct: 66 MLATGLIAILIDLIAFRTLRNR---------GNAEFPALVSSIGVDLILVSIAQQVSKTQ 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + + +L + L A++I +LR+T R + N++ Sbjct: 117 VLNFPFGTFPIKFYDLFGLRISLLQIVILAVVAVLVAALIFYLRKTTFGRQVRAVATNER 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L L F ++ A G+AG + I M + +V++GG+ Sbjct: 177 AAALLGVNAQSVYLQTFFIAGALAGLAGVLIGLLFNSIQFLM-GEPYMLRAFVVVVIGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 S+ A+ +L L + F F + + Sbjct: 236 GSVQGAIVASLLLGVTQSLAVAYLPSGLTDAIIFGLLFLVLLVRPNGL 283 >gi|293604328|ref|ZP_06686735.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292817205|gb|EFF76279.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 646 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 105/320 (32%), Gaps = 26/320 (8%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 P+ + +T + I Y + + GL+++ G L +++ Y GA+ Sbjct: 20 IPVFEIFGVPSTALFGQLLLGLINGSFYALLSIGLAVIFGLLNIINFAHGAQYTAGAFLA 79 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +L + G++ W + + +I +++ + + L+++ ++ Sbjct: 80 WMLLNYLGVNYWAALVLVPLIMAVFAVVVERLLISRTYRMDHLYGLLLTFGIALLIEGGL 139 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 G +G+ F+ + + + L ++ + + Sbjct: 140 RQAYGVSGLPYTIP----------KALSGGVNLGFMFLPWYRGWAVAVSLVLCLAVWVLI 189 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 +T + R +N S + +A+ A +AG A M Sbjct: 190 EKTRVGAMLRAATENPTIVRSFGINVPLLITLTYALGVALASVAGVIAAPIYQV--SPMM 247 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + ++V ++V++GGM S+ + L + L + Sbjct: 248 GSNLVVVVFAVVVIGGMGSIMGAILSGFGLGIIEGLTKVF--------------YPEAAN 293 Query: 322 TLMVIALFLVILMRSHSLLR 341 + I + LV+L + L Sbjct: 294 LAIFIIMVLVLLCKPAGLFG 313 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 118/302 (39%), Gaps = 29/302 (9%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + +++L + +FA +++VG +GLLS + AY+ I+ G + L + Sbjct: 359 TFLMKVLCFALFAAAFNLLVGYVGLLSFGHAAFFGAAAYATGIVMKVLGATPELGLLAGV 418 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + G G+ G +++ +G Y A+ TL +S++ I ++ T G+ G+ R Sbjct: 419 VTGGLLGLAFGAIAIRRQGIYFAMITLALSQLVYFIAVQA-GFTGGEDGLQSVPR----- 472 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 F + + MYY L + L + +L + + R++RDN++ Sbjct: 473 --------GKLFGIFDLQNVMPMYYFTLAVFALGYAFVLRVLNSPFGEVIRSVRDNEQRA 524 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 SL + KL AF +S++ G+AG S + N V+ + +LGG+ + Sbjct: 525 RSLGYSTSRYKLLAFTLSASVAGLAGGLKVLVFGVASLTDVHWHANGEVVLMALLGGIGT 584 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + + + + L +L+ ++ Sbjct: 585 VFGPLAGAFTFVSLQNYLAPL---------------GSWVLIVQGAIFVLCVLLLRDGIM 629 Query: 341 RL 342 L Sbjct: 630 GL 631 >gi|255262320|ref|ZP_05341662.1| branched-chain amino acid ABC transporter, permease protein [Thalassiobium sp. R2A62] gi|255104655|gb|EET47329.1| branched-chain amino acid ABC transporter, permease protein [Thalassiobium sp. R2A62] Length = 326 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 132/338 (39%), Gaps = 20/338 (5%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L +K + + + + L A + + + + + G+ + +G Sbjct: 2 LNFSKTQIMGVVAFLAIFFVGVPVLIAATGRWDFYFTLTSVALLAIASAGVWLTF-YIGR 60 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 +++ +GAY IL + G S WL +P + + + +++GLP L+ RG Y A+ Sbjct: 61 INIGQGAFALVGAYVSAILVVKTGWSFWLSLPAAGLFAALVAVLIGLPILRLRGVYFAMI 120 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL+++++ + K + ++ + F ++ + Y+ Sbjct: 121 TLVLTQVATLTALALPITNGAKGITSIPLPGAISIFSMPLVPDFSTLENARMA----FYF 176 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + + ++ + + L + + + R+++ N++ S+ I + ++ FA+SS F G+ Sbjct: 177 TAIILMIITYAALYRLVNSRLGHLCRSMQQNEELASSIGVNITYIRILIFAISSFFGGIG 236 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA F + + P F +++ + LGG+ + T L +L Sbjct: 237 GAMFGSISQSVYPATFVVKDSVDFMLNCFLGGLGYVFGPMLGTLALYFGWDLL------- 289 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 F + L ++I + LL +R Sbjct: 290 --------FEFGKYQMLIYATLLIIIIRFLPNGLLSIR 319 >gi|227883601|ref|ZP_04001406.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli 83972] gi|227839480|gb|EEJ49946.1| branched-chain amino acid transporter permease subunit LivH [Escherichia coli 83972] gi|307555551|gb|ADN48326.1| high-affinity branched-chain amino acid transport system permease protein LivH [Escherichia coli ABU 83972] Length = 308 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93 + + Y + A G ++V G +G+++ Y IG+Y ++ + + Sbjct: 12 MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMLGIDTGWL 71 Query: 94 ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + +I+ A G + + + + + LI + L + +T G Sbjct: 72 LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 R L + + + + ++ +++R + + A Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 ++ K L F + +A +AG I+P F + Sbjct: 185 CACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ S+ IL L + ++ F L L Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290 Query: 331 VILMRSHSLLRL 342 V+L+ +L Sbjct: 291 VLLVMPTGILGR 302 >gi|224372150|ref|YP_002606522.1| abc transport system permease protein [Nautilia profundicola AmH] gi|223588421|gb|ACM92157.1| abc transport system permease protein [Nautilia profundicola AmH] Length = 304 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 90/303 (29%), Gaps = 16/303 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A G ++V G L L++ +GA+ I GL+ ++ + Sbjct: 10 IVNGFSLGSMYALIAIGYTLVYGVLRLINFAHGDIMMVGAFMAFIFFKIIGLNFYVSVLF 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + G++ + K D A ++ Sbjct: 70 AIIFTAGVGILTYASAYKPLLDKDAPKISLLITAIGISFFLESLFNVIANQYLG----GT 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + V + L ++ L RT I A R + + + Sbjct: 126 YQAFYFPKWFSHILHVGSLTVPVLTVLVPILTLALLGIVLFILYRTKIGIAIRALAFDIQ 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA+ SA + G +A + I P M + + ++GG+ Sbjct: 186 TVKLMGADSNKIIAFVFALGSALAAIGGIAYAMAYPSIDPYM-GMLVGLKAFAAAVVGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S++ IL G F I L V+L + Sbjct: 245 GSVTGAVIGGFILGFAEVAIPGFFPELGGWKDAFA-----------FIFLIFVLLFKPTG 293 Query: 339 LLR 341 ++ Sbjct: 294 IMG 296 >gi|302877547|ref|YP_003846111.1| inner-membrane translocator [Gallionella capsiferriformans ES-2] gi|302580336|gb|ADL54347.1| inner-membrane translocator [Gallionella capsiferriformans ES-2] Length = 307 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 94/305 (30%), Gaps = 10/305 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Q +Y + A G ++V G LGL++ +GA + + + Sbjct: 8 IINGLVQGSVYALVALGYTMVYGILGLINFAHGEVVMVGAMLALSALTALIGWGVPPLLA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + L I + A + + Sbjct: 68 LPVSLLLAMAGCMLLGFGIERIAYRPLRHAPRLAPLITAIGVSIVLQNLAMMIWGREYHA 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + I I + + M A ++L + RT++ A R + +NQ Sbjct: 128 FPQLINNQSHHVGGAIINDIQIIIIIMAFVIM----AGLMLIVHRTSLGRAMRAVAENQH 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + SA +AG ++ ++ F + + +LGG+ Sbjct: 184 AAQLMGVDVNRVISVTFMLGSALAAIAG-LMVSANYGLAHYYMGFLLGLKAFTAAVLGGI 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L A+L G++ + L + L V++ R Sbjct: 243 GNLR-----GAMLGGLLLGLIESLGAGYIGDLTGGFLGSQYQDVFAFFVLIAVLVFRPSG 297 Query: 339 LLRLR 343 LL R Sbjct: 298 LLGER 302 >gi|146283530|ref|YP_001173683.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145571735|gb|ABP80841.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] Length = 295 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 106/316 (33%), Gaps = 26/316 (8%) Query: 26 LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85 L + + + I Y + + GL+I+ G L +++ Y +GA+ + Sbjct: 3 LVFGVPLSVLLGQLLLGLINGAFYALLSLGLAIIFGLLRIINFAHGAQYMLGAFVAFLGL 62 Query: 86 SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145 + G+S W + ++ ++ G GM + L+ + L+++ I+ Sbjct: 63 NYLGVSYWFALVLAPLVVGCLGMAIERGLLRRIAGEDHLYGLLLTFGLALIVEGSFVKLF 122 Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 G +G + F F+ I+ +V++ + + + RT Sbjct: 123 GVSGSSYPMP----------ELLRGGFNLGFMFLPIYRAWVIVAALVVCLATWYVIERTR 172 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265 + + R +N K + + A AG A + Sbjct: 173 LGSYLRAGTENPKLMQGFGINVPLLVTLTYGYGVALAAFAGVLAAP--IYAVTPGMGSNL 230 Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325 I+V ++V++GGM S+ + + L + T++ Sbjct: 231 LIVVFAVVVIGGMGSILGAIITGIAMGLIEGLTKVF--------------YPEAANTVVF 276 Query: 326 IALFLVILMRSHSLLR 341 + + V+L+R L Sbjct: 277 LVMVAVLLIRPAGLFG 292 >gi|293607543|ref|ZP_06689877.1| urea ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292813976|gb|EFF73123.1| urea ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 330 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 103/307 (33%), Gaps = 18/307 (5%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + L+ + A L+ V G G+L + +GAY++ I +G Sbjct: 26 DMFSLLSMTVYLVMALLALSLAFVWGHGGILCFGQAAFFGLGAYAWAIGAFNFGP----G 81 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + A+ L ++ L + + +++ + + + Sbjct: 82 MGAMALAIAVPAAFAALLGYFMFYGKISDVYLGVITLAVTLILFNLMNSTSGDSYRIGEA 141 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 L + S+ ++ + + + + + + + + +R+ Sbjct: 142 LLGGFNGIPSIPPLTLPGAAEPLSPEGTFTLAALILIAAYFGLRAVMVSRFGRVVAAVRE 201 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N++ L KL+AF + A G+AG +A +SP +F S++ +I VI+ Sbjct: 202 NEQRALLLGYNASLYKLAAFTLGGALAGLAGMLYANWGAFVSPGVFGLSQSAQIIIWVIV 261 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG +L A L +V + ++ ++L L +L+ Sbjct: 262 GGRGTLIGPIIACVALQAMVTQLGAQHTVDTG--------------LVLGVSLILFVLLI 307 Query: 336 SHSLLRL 342 L Sbjct: 308 PRGLAPT 314 >gi|322419574|ref|YP_004198797.1| inner-membrane translocator [Geobacter sp. M18] gi|320125961|gb|ADW13521.1| inner-membrane translocator [Geobacter sp. M18] Length = 294 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 88/290 (30%), Gaps = 13/290 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +++ S IY + +I+ S G+++ +G + + L + I Sbjct: 9 QFVISGLATGAIYALIGLSFAIIFNSTGIINFAQGEFVMLGGVLTIFSLNVLQLPLPAAI 68 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + +++ G+ +++ + +A +I++ ++ + GK Sbjct: 69 VTAVVVTTIIGIAFERLAIRPLKNATPLALIIITIGASILIRGMVMLLWGKD-------- 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + ++ + L+ T A R N Sbjct: 121 ---TQALPAFSGTDPISVVGATLLPQHLWIFGVTVLVIVGCRLFFHHTISGKAMRACSFN 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +A + ++ L +F +S+A +AG A + I+G Sbjct: 178 PRAANLVGISVGRMVLFSFVISAAVGSLAGVIIAPLTMTA--YDVGVMLGLKGFCAAIMG 235 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 GM S IL + L G+ + + F + + Sbjct: 236 GMGSGLGTVLGGLILGTLESLGAGLISSGYKDAIAFFILLLILFIRPQGL 285 >gi|254461078|ref|ZP_05074494.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206677667|gb|EDZ42154.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 326 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 128/336 (38%), Gaps = 20/336 (5%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + + + + + + + + + G+ + +G ++ Sbjct: 4 FTSKQLVGVGIFLFMIFIGVPLIIGATGRWDFYFTLTSVALLAIASAGVWLTF-YIGRIN 62 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127 + IGAY IL + G S W+ +P + + + +++GLP L+ RG Y A+ TL Sbjct: 63 IGQGAFALIGAYVSAILVVKAGWSFWISLPAAGLFAAIVAILIGLPILRLRGVYFAMITL 122 Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187 +++++ + K + + L F ++ YY Sbjct: 123 VLTQVVTLTALALPITNGAKGISNIPLPSSISVFGIPILPDFAAME----NTKLAFYYTA 178 Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247 + L+ + + L + + + R+++ N++ S+ I + ++ FA+SS F G+ GA Sbjct: 179 CIIMILTYAALYRLVNSRLGHLCRSMQQNEELASSIGVNISYIRVVIFAISSFFGGLGGA 238 Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307 F + + P F+ ++++ + LGG+ + T +L +L Sbjct: 239 MFGSIAQSVYPSSFQVADSVNFMLNCFLGGLGFVFGPMLGTLVLYFGWDLL--------- 289 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 F + L ++I + LL +R Sbjct: 290 ------FEFGKYQMLIYSTVLIIIIRFLPNGLLSIR 319 >gi|312879765|ref|ZP_07739565.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Aminomonas paucivorans DSM 12260] gi|310783056|gb|EFQ23454.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Aminomonas paucivorans DSM 12260] Length = 297 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 96/305 (31%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G ++V G L L++ + +GAY + Y L + + + Sbjct: 10 FFNALTLGSLYGLIAIGYTMVYGILRLINFAHGDIFMLGAYGVFWALTLYSLPWSVAVVL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S +++ G+++ + + I+ LI + + + R Sbjct: 70 SVVLTAGLGILVDRIAYRPLRSAPRISALISAIGVSFFIENLCIVV-----FSGIPRPVE 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +++ F + + ++L A + + RT A R I + + Sbjct: 125 RPEWLVNVLEFGNIRILPLALVVPAISLVLV-----AGLFWVVYRTKPGLAMRAISKDIE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + ++ F + SA AG +A +I P M +LGG+ Sbjct: 180 TTRLMGVSVDHIIALTFGLGSALAAAAGIMWALRYPQIHPLM-GIFPGFKAFIAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + + F + L + Sbjct: 239 GSIQGAMIGGLLLGFIEIMVVAFFPALSGYRDAFAFVLLIVILLL-----------KPTG 287 Query: 339 LLRLR 343 L+ + Sbjct: 288 LMGEK 292 >gi|86747269|ref|YP_483765.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86570297|gb|ABD04854.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 288 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 93/305 (30%), Gaps = 26/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y A G S+V G L +++L +GAY L LS W I V Sbjct: 7 LINALVLGSLYACIAIGFSLVWGVLNVINLIHGSFIVLGAYLAFGLYQSLHLSPWYAIVV 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A + G I+ L + TL ++ IL + Sbjct: 67 AAPVFFVFGYIVQRLILNRVITAPVLVTLTLTFGLDLILNNA-----------MIYVFTA 115 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + V+ + L+ + L LRR+ + A +R ++ Sbjct: 116 DYRRLTLIPPLGSVSFEGVVVPVDRLIATATALALTGLLYLLLRRSRVGRAIVAVRLDRD 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + AF + +A G AG A + + +LGG+ Sbjct: 176 AAVLMGVHVPSIYAVAFGLGAALAGCAGVLMALIFPISPLTSSAYLG--KAFVVCVLGGL 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+S +L V + + L F R Sbjct: 234 GSVSGALAGGMLLALVESVGSAFFGPAHATTLSFLLLIIFLIL-------------RPQG 280 Query: 339 LLRLR 343 L+ + Sbjct: 281 LVGRK 285 >gi|217969003|ref|YP_002354237.1| inner-membrane translocator [Thauera sp. MZ1T] gi|217506330|gb|ACK53341.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 304 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 89/305 (29%), Gaps = 15/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G +G+++ + + A+ V + + IP+ Sbjct: 8 LINGLTLGAMYGLIAIGYTMVYGIIGMINFAHGDIFMVSAFIAVTAFTILAAADVTSIPL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157 + + + + I I + R+ Sbjct: 68 ALTFVLIVSIFFTSAYGWAVERTAYRPLRGSTRLAPLISAIGMSIFLQNSVQLTQGARVK 127 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + + I + P V +++ L ++ + +T R ++ Sbjct: 128 PIPPVLEGGIVLWDAPGFTVQIGWSQMLIIVTTVILMSAFTWMITQTPFGRQQRACEQDR 187 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 L + F + +A +AG + F I + +LGG Sbjct: 188 TMAALLGVNVDRTISYTFMLGAALAAVAGVMVTVYYGVVDFF-IGFLAGIKAFTAAVLGG 246 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + SL ++ + + + + F L LV+++R Sbjct: 247 IGSLPGAMLGGLLIGLIESFWAAYLWAEYKDVATFG-------------ILCLVLMLRPS 293 Query: 338 SLLRL 342 LL Sbjct: 294 GLLGR 298 >gi|254504934|ref|ZP_05117085.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] gi|222441005|gb|EEE47684.1| putative amino acid or sugar ABC transport system, permease protein [Labrenzia alexandrii DFL-11] Length = 360 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 87/303 (28%), Gaps = 18/303 (5%) Query: 25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84 L S + + Q+ I + A SIV+ + G + L+ + + Sbjct: 62 FGLLLGSKFFSPFAMTLILQQVQIVGIVAAAQSIVILTAG-IDLSVGAIMVLSSVVMGQF 120 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 RYGL + + I + CG I G + + + + + T Sbjct: 121 TFRYGLPVEVAIAAGLICGTICGYINGFLVAVVKLPPFIVTLGMWQIVLATNFLYSANET 180 Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204 I L F + I Y ++ M L + LR+T Sbjct: 181 IRSQDISEQAPLLQF------------FGNKVAIGGAIFTYGVIFMVLLVLVLAYVLRQT 228 Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264 A I D+ +A + ++S + +S AG +SP + + Sbjct: 229 AWGRHVYAIGDDPEAAQLSGVKVKRVQISVYMLSGLICAFAGWAMIGRIGSVSPTTGQLA 288 Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 + ++VI GG S+ I+ + + L Sbjct: 289 NIESITAVVIGGISLFGGRGSILGTLFGALIVGVFTLGLRLLGADAQWTYLLIGLLIIAA 348 Query: 320 HTT 322 Sbjct: 349 VAV 351 >gi|18314010|ref|NP_560677.1| branched-chain amino acid transport permease protein [Pyrobaculum aerophilum str. IM2] gi|18161586|gb|AAL64859.1| branched-chain amino acid transport permease protein [Pyrobaculum aerophilum str. IM2] Length = 363 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 107/331 (32%), Gaps = 34/331 (10%) Query: 44 IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103 I + IY ++ L++ VG +GL V+ A+GA + + ++ L I+ + S + Sbjct: 19 IIVAIYGIYVLSLNLEVGYMGLPQFGKVMFLALGAIAVGGIATKVALLIYSHVISSQLNI 78 Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT-----NGKAGIYVADRLYF 158 + S I + + + + IT G G+ +A Sbjct: 79 SPLSDLDTYCSAYQYSAIGIINNIFSNSPLSGLAFFFMSITLAAILGGVFGVLMAGPALR 138 Query: 159 LGTT--------------------------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192 L V + F + V L Sbjct: 139 LREDYLGILLLVSAETVRVISTYTPQVACGVFGAVIPDPFAWLREGRQWGYLAVTLIFLL 198 Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252 LS I+ L + A R IRD + A I+ ++ A +SA G+AGA A Sbjct: 199 LSFVILERLGNSPFGRALRAIRDAEVAARVFGKDIVKFRVRVLATASALAGVAGALLAFY 258 Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 + + F E +++I+GG + + + ++ Y Sbjct: 259 NNFVLMGQFVPLETFKGWAMLIIGGTGNNIGALLGVVVYYVID---RVLSLYKEGIRQII 315 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + I + LV++ R ++ R Sbjct: 316 NVDPIFFQYIIFGIIIILVLMFRPQGIISER 346 >gi|294651937|ref|ZP_06729226.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] gi|292822169|gb|EFF81083.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] Length = 544 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 30/291 (10%), Positives = 88/291 (30%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ IGAY+ ++ S + L+ + + ++ Sbjct: 271 ITYGLLGVINMAHGELIMIGAYTTYVVQSFFKTHFVGLVDWYLLAAIPAAFLVSALIGML 330 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + + S + + + Sbjct: 331 IER--TVIRPLYGRQLETLLATFGVSLILMQLVRMVFGAQNVEVSNVSWLSGGIALTPSL 388 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + ++ L +T R + N++ ++ + AF + Sbjct: 389 MLPYNRIAIIAFTIAVLLLLVFLLNKTRFGLFVRAVTQNRQMARAVGIRSARIDMMAFGL 448 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A + + + ++ +V + + Sbjct: 449 GSGLAGLAGCALAQVGNVGPDLGQNYIIDAFLVVVVG--------------GVGQVWGAV 494 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + ++L+ + L+ + + L I R L ++ Sbjct: 495 LAALGLGISGTVLEIGMGAVLAKIILL-VLVILFIQKRPQGLFAIKGRFVE 544 >gi|159899199|ref|YP_001545446.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779] gi|159892238|gb|ABX05318.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779] Length = 672 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 75/341 (21%), Positives = 126/341 (36%), Gaps = 34/341 (9%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R N I+ PLL F I IQILIY + A GL+++VG G+ Sbjct: 341 VRQNWRWLIVPAFLACVPLLNAWFELG------IQVAAIQILIYGLLALGLNLIVGWGGM 394 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG---------ACGMIMGLPSLK 116 L L + +GAY ++ + + + G ++GL + + Sbjct: 395 LDLGYAAPFVLGAYLVGLMSTGLHGGWQTWLASGELAGILLVCGIGGSLFGWLIGLLAAR 454 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 + LAI T + I Q +L W+ +TNG +GI L Sbjct: 455 LDNELLAIVTFALGVIAQRVLQNWRSLTNGSSGISGVPNLQIF--------------GLD 500 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 + YY +L + + L R+ A + ++ A S+ + K A+A Sbjct: 501 LATPSATYYAVLAITCGVGILGYNLVRSHYGRALAALASDELAAASVGVAPVALKRLAYA 560 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI-----L 291 +AG FA S ISP + +F + I + IV+L G + AT + L Sbjct: 561 WGGGVAALAGGLFAVSFSYISPTLAEFRVSAIALIIVVLAGSRRIIAPLIATCLVLGYDL 620 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 + + +L + + + N R + L L + Sbjct: 621 LLIPKLGKLFDDLREQTGNWLWSAINPRGANFLSFGLMLYL 661 >gi|126668821|ref|ZP_01739767.1| Branched-chain amino acid ABC-type transport system, permease component [Marinobacter sp. ELB17] gi|126626704|gb|EAZ97355.1| Branched-chain amino acid ABC-type transport system, permease component [Marinobacter sp. ELB17] Length = 289 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 93/301 (30%), Gaps = 26/301 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +M A GL+I+ G++G+++L IGAY L S++G+ I + +P+ + Sbjct: 12 LSLTSILLMVALGLAIIYGTMGVINLAHGQFVMIGAYVAWFLQSQFGIGIIVGLPLIFIA 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 G+ + ++ L I + + + + Sbjct: 72 GALLGLAVERTIIQRLYTRPLDTILATWGIGIVLEQLVRGLFGSDSRYVARPEFLDGNLI 131 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + +++ A L RT R + N++ Sbjct: 132 LAGVHM-----------SYYRLFIIGFALLTLAVTWFLLFRTEFGTKLRAVIQNKEISEC 180 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + FA + +AGA + +VI+GG+ S+ Sbjct: 181 YGVSANRVYAVTFAYGAGLAAIAGALITPMVSV--TPTMGTGVVVDAFLVVIVGGVGSIV 238 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 A A ++ + L+++ + ++I R L Sbjct: 239 GTAAAALMIGEATAWLSYLLSETTAR-------------ILILLGVIVLIRFRPQGLFPD 285 Query: 343 R 343 + Sbjct: 286 K 286 >gi|225628060|ref|ZP_03786096.1| ribose ABC transporter permease [Brucella ceti str. Cudo] gi|254708287|ref|ZP_05170115.1| hypothetical protein BpinM_15358 [Brucella pinnipedialis M163/99/10] gi|254710661|ref|ZP_05172472.1| hypothetical protein BpinB_10396 [Brucella pinnipedialis B2/94] gi|254714844|ref|ZP_05176655.1| hypothetical protein BcetM6_16193 [Brucella ceti M644/93/1] gi|254717901|ref|ZP_05179712.1| hypothetical protein BcetM_16141 [Brucella ceti M13/05/1] gi|256032155|ref|ZP_05445769.1| hypothetical protein BpinM2_16172 [Brucella pinnipedialis M292/94/1] gi|256160351|ref|ZP_05458044.1| hypothetical protein BcetM4_15195 [Brucella ceti M490/95/1] gi|256255556|ref|ZP_05461092.1| hypothetical protein BcetB_14979 [Brucella ceti B1/94] gi|260169287|ref|ZP_05756098.1| ribose ABC transporter, permease protein [Brucella sp. F5/99] gi|261219749|ref|ZP_05934030.1| monosaccharide-transporting ATPase [Brucella ceti M13/05/1] gi|261222762|ref|ZP_05937043.1| monosaccharide-transporting ATPase [Brucella ceti B1/94] gi|261315788|ref|ZP_05954985.1| monosaccharide-transporting ATPase [Brucella pinnipedialis M163/99/10] gi|261318233|ref|ZP_05957430.1| monosaccharide-transporting ATPase [Brucella pinnipedialis B2/94] gi|261322639|ref|ZP_05961836.1| monosaccharide-transporting ATPase [Brucella ceti M644/93/1] gi|261758800|ref|ZP_06002509.1| bacterial inner-membrane translocator [Brucella sp. F5/99] gi|265989264|ref|ZP_06101821.1| monosaccharide-transporting ATPase [Brucella pinnipedialis M292/94/1] gi|265998725|ref|ZP_06111282.1| monosaccharide-transporting ATPase [Brucella ceti M490/95/1] gi|225617223|gb|EEH14269.1| ribose ABC transporter permease [Brucella ceti str. Cudo] gi|260921346|gb|EEX87999.1| monosaccharide-transporting ATPase [Brucella ceti B1/94] gi|260924838|gb|EEX91406.1| monosaccharide-transporting ATPase [Brucella ceti M13/05/1] gi|261295329|gb|EEX98825.1| monosaccharide-transporting ATPase [Brucella ceti M644/93/1] gi|261297456|gb|EEY00953.1| monosaccharide-transporting ATPase [Brucella pinnipedialis B2/94] gi|261304814|gb|EEY08311.1| monosaccharide-transporting ATPase [Brucella pinnipedialis M163/99/10] gi|261738784|gb|EEY26780.1| bacterial inner-membrane translocator [Brucella sp. F5/99] gi|262553349|gb|EEZ09183.1| monosaccharide-transporting ATPase [Brucella ceti M490/95/1] gi|264661461|gb|EEZ31722.1| monosaccharide-transporting ATPase [Brucella pinnipedialis M292/94/1] Length = 334 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ +L + I ++ +Q I + A G++ V+ + L+ Sbjct: 27 IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ + ++ P S I+ G+++G+ G ++ + Sbjct: 86 ALAGIVSASFATTSAMAGIAGAPYSPFIAICVGLLVGIGCGALVGTIVSRFAVPAFVATL 145 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +L + +T G L + + + + ++ + + Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L R+ + N A + I + S + +S G+AG +A Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253 Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 S + I+ V++ GG+ ++ I+ + M + Sbjct: 254 SA-LPQAGISYELDAIAAVVIGDTSLSGGIGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312 Query: 309 LLKFDCSFNMRHTT 322 + Sbjct: 313 QVLKGALIVGAVML 326 >gi|326794844|ref|YP_004312664.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326545608|gb|ADZ90828.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 287 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 92/303 (30%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL++V G +G+L+L + +GAY + G Sbjct: 10 LINGLQYGLLLFLIASGLTLVFGVMGILNLAHGSMFMVGAYLAWYFVQQTGSFAASAAIS 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + ++ + L+ + + Sbjct: 70 AVIALLIGFVVERTLIRRLYKRNHLDQVLLTIGMIFVFNAMQGLLWG----------NDP 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 LG V + + + Y ++ +V L ++ + + +T + R +++ Sbjct: 120 LGVDVPEALSASIPLTGIIEYPVYRIFVALFCVVVAVGMYYVINKTRLGMLIRAGESDRE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L I FA+ +AG A + I +V++GGM Sbjct: 180 MVECLGIDINRLYTIVFAIGVMLSAVAGVVAAPISSIVPGMGEHIL--ITCFVVVVIGGM 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V + + ++ I + ++L++ Sbjct: 238 GSIKGAFIGALMVGLVDTFASVL--------------VPELSSMMIYIFMAFILLIKPQG 283 Query: 339 LLR 341 L Sbjct: 284 LFS 286 >gi|157363982|ref|YP_001470749.1| inner-membrane translocator [Thermotoga lettingae TMO] gi|157314586|gb|ABV33685.1| inner-membrane translocator [Thermotoga lettingae TMO] Length = 284 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 98/295 (33%), Gaps = 25/295 (8%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 +Y + + GL++V G + +++ I Y+ L S + ++ +P++ +++ A Sbjct: 14 CVYSLVSVGLTLVWGLMDIINFAHGDFMMISMYTVFWLYSLFKWDPFISLPIAVIVAAAL 73 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 G+ +K + + L+ + + + S+ Sbjct: 74 GLTTYKLIIKRLVNAPGLMALLATFGLSLFIRNFAQFLWSPN----------YRFIGESI 123 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + R +I + +G ++ I L+++RT I A + N+ + Sbjct: 124 LSGKRIIFGDIIIGFPQLFAAVGSILITLLIALFIKRTRIGKAIQATAQNRDIAELMGVD 183 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + FA+S +G+AG + ++ IV LGG ++ Sbjct: 184 TEKIYMLTFAISGICVGVAGTLLSGIFPV--YPESGAMYGLLAFVIVALGGFGNIWGAFY 241 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 A ++ L F + F + LV+ R L Sbjct: 242 AGILIGLAEALGGFYFGTQFKYAIAF-------------LIYLLVLQFRPKGLFG 283 >gi|312195627|ref|YP_004015688.1| inner-membrane translocator [Frankia sp. EuI1c] gi|311226963|gb|ADP79818.1| inner-membrane translocator [Frankia sp. EuI1c] Length = 777 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 74/301 (24%), Gaps = 14/301 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y + IY + A GL + + G+ + + A+ Y + + L + Sbjct: 6 QYTILGLVLGGIYGIAASGLVLTCTTSGIFNFGHGSIAMLSAFVYWQVRFGWHWPAPLAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + S+ L + I + A Sbjct: 66 VAVLGVFAPALGALLHVSIMR--------GLRETTEITRITVTVALTVGSLALANWIWDP 117 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + L+ ++ + + RT R + D+ Sbjct: 118 TVPRRFDYFFGGTHQVRVAGSRITYHELIALVMAVVIAVGLRFFFYRTRTGVGMRAVVDD 177 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++A+ S +AG I + + G Sbjct: 178 PPLLRLSGGRPERLATLSWALGSMLAALAGILITPILGGSLDPNALTLLVIDAFAAAVFG 237 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 + S+ +L + + +L +I LF+V+L Sbjct: 238 RLRSVPLTFLGAVVLGLANNYVLAYFPSERWTW------TSDFRISLPMILLFVVLLWLP 291 Query: 337 H 337 Sbjct: 292 Q 292 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 97/250 (38%), Gaps = 8/250 (3%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG----LSI 92 + + + + + + A L + G G ++L V AIG G Sbjct: 335 PTVVNTMVTGMTFAIIALSLVPLTGYAGEINLAPVSFGAIGTIIAYHYGITGHGVDTRMT 394 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + ++A + G ++ LP+L+ RG YLA+AT+ +++ Sbjct: 395 IWGLLLAAAVCAVVGALVALPALRLRGLYLALATMAFGVFVSTMVVADTVPRVLPLVHTK 454 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 V ++ + + + + + L ++ RR+ Sbjct: 455 FSIFPNGTLNVPRPRFGPIDLANGGQFLMVVTVLFAVLGVLMVAL----RRSGYGQRLVA 510 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 ++D+ A +L + KLS F +S+A G+ GA +A+ +SPD F ++ ++ Sbjct: 511 LKDSPAACATLGQNPVRLKLSVFMLSAAIAGVGGALMSAAVVSVSPDRFTIFVSLGLVMT 570 Query: 273 VILGGMTSLS 282 V++ G+ +S Sbjct: 571 VVVAGIGYVS 580 >gi|161523266|ref|YP_001578278.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189351961|ref|YP_001947589.1| branched-chain amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|221202199|ref|ZP_03575234.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221208740|ref|ZP_03581739.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221214308|ref|ZP_03587280.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|160340695|gb|ABX13781.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616] gi|189335983|dbj|BAG45053.1| branched-chain amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221165963|gb|EED98437.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221171372|gb|EEE03820.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221177993|gb|EEE10405.1| putative amino acid uptake ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 294 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W ++ ++ +I GA G+ + L++ + L+++ ++ G Sbjct: 63 YFGLPYWAMLVLAPLIVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + +V+L+R L Sbjct: 277 IMAIVLLIRPAGLFG 291 >gi|293603214|ref|ZP_06685647.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818445|gb|EFF77493.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 321 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 126/311 (40%), Gaps = 30/311 (9%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + S ++LIY + A L++++G G+++L + GAY+ IL S Sbjct: 23 PALGLDFYISFVRRVLIYALAATSLNLILGYGGMVALGHAAFFGAGAYAVGILAMSGITS 82 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 ++ PV+ +++ I G SL+ RG Y + TL +++ I I + Sbjct: 83 ALIVWPVAMLLAAVLAAITGAISLRTRGVYFIMITLAFAQMLFYIFISLRQYGG------ 136 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 +L + P + ++ YY++L + L + + + A + Sbjct: 137 ---------EDGLNLPGYSTLPGIDLANDVSFYYLVLALFALLMWVFSRVMSSRFGTALQ 187 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271 IR+N+ S+ + KL AF +S A G+AGA A ISP + ++++ ++ Sbjct: 188 GIRENESRMESMGYPVYRIKLVAFTLSGAAAGLAGALLANHNLFISPSLMHWTQSANLLI 247 Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 +V++GG+ +++ + E+ Y+ + + L V Sbjct: 248 MVLVGGIGLRWGGVAGAVVMLTLEEMLRLWTEYWH---------------LPLGVLLLCV 292 Query: 332 ILMRSHSLLRL 342 + L+ L Sbjct: 293 VFGAPRGLVGL 303 >gi|269925703|ref|YP_003322326.1| inner-membrane translocator [Thermobaculum terrenum ATCC BAA-798] gi|269789363|gb|ACZ41504.1| inner-membrane translocator [Thermobaculum terrenum ATCC BAA-798] Length = 307 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 96/315 (30%), Gaps = 32/315 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-----------VILGSR 87 + ++ + A G ++V G L L++ + + ++ Sbjct: 8 LLDGIALGAVFALIALGYTLVYGILELINFAHGDLFMLTSFMSLTVLDAIGVDSGSPFYV 67 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 ++ L + V + G +I+ + + + +A LI + ILI+ G Sbjct: 68 KVIAFLLGLVVPMIFGGVLNVIIERVAYRRLRNAPRLAPLISAIGVSFILIQIGLTWKGP 127 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 + + + + + + V+ L + + T I Sbjct: 128 S-------PVSFPRLWIPPVNLLDWTGLGLRFYLRSLLVIAMTVILLILLRFVVLHTKIG 180 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 A R ++ A + I AF + A G AG + + F + Sbjct: 181 KAMRATSQDRDASALMGININRTISFAFLLGGALAGAAGLMYGLHTGTMVFT-RGFETGL 239 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + +LGG+ +LS I+ V + + ++ Sbjct: 240 KAFTAAVLGGIGNLSGAVLGGFIIGIVESFSNYYLQSTWTNA-------------VIFAI 286 Query: 328 LFLVILMRSHSLLRL 342 L ++++ R LL Sbjct: 287 LIIILVFRPSGLLGE 301 >gi|222479575|ref|YP_002565812.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] gi|222452477|gb|ACM56742.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239] Length = 319 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 102/313 (32%), Gaps = 10/313 (3%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 Y+ + + I V+ + GLS+V + IGAY+ ++ G ++ Sbjct: 6 YLANGLVFSSIIVLGSIGLSLVYSIADFANFAHGDTMTIGAYTALVTFGAVGGLGGAVLG 65 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + A + + + ++ G I + + ++ +A I + Sbjct: 66 LPYGFFLALVVGIAVAAVVAVGTEKLIYEPLDVDSIGLLITSIGIAFIYRAVIQIRFGSG 125 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 F ++ L V + ++ L + + L+ T + R + DN Sbjct: 126 FTRFDIQPLRPIESLVPYGVRVTLHDVAIVGSAAVLVVGLHVLLQYTDLGRKMRAMADNP 185 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 KL + + + G G F F+ +++ + VILGG Sbjct: 186 DLARVSGIRTKRVKLWTWVIGAGLAGAGGVFLGLFNQL--SPRMGFNLLLVIFAAVILGG 243 Query: 278 MTSLSKIAKATAILIGVVELCCGMN--------FYYFNSLLKFDCSFNMRHTTLMVIALF 329 + S+ ++ + +L + + + + + + + Sbjct: 244 IGSVYGAMAGGFLIGMINQLTPFFSNVVEALPIAPNWLETVLENLISIEYANAIAFVIMV 303 Query: 330 LVILMRSHSLLRL 342 +V+L+R + + Sbjct: 304 VVLLVRPNGIAGE 316 >gi|89092361|ref|ZP_01165315.1| probable transmembrane ABC transporter protein [Oceanospirillum sp. MED92] gi|89083449|gb|EAR62667.1| probable transmembrane ABC transporter protein [Oceanospirillum sp. MED92] Length = 295 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 106/318 (33%), Gaps = 26/318 (8%) Query: 24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83 + FL + + I Y + + GL+I+ G L +++ Y +GA+ + Sbjct: 1 MATFLGINLFGLFGQLLVGLINGSFYALLSLGLAIIFGLLKIINFAQGALYMLGAFFAWM 60 Query: 84 LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143 + G++ W + + G G++M L+ + + +L+++ IL Sbjct: 61 ALNYMGINYWAALLFVPLAVGFIGILMERFLLRPIANEDHLYSLLLTFGLALILQGAFTH 120 Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203 G +G+ A F+ + ++++ + A + + Sbjct: 121 LYGSSGLSYAIP----------EELKGGNRLPFMYLPNYRAWIIVASIIVCAGTWYMIEK 170 Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263 T + R +N + + + F G AG A Sbjct: 171 TKLGAYLRAGTENPQLMQAFGINVPLIVTLTFGFGVGLAGFAGVMAAPVYSV--SPDMGS 228 Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + I+V +IV++GGM S+ + V L + TT+ Sbjct: 229 NMLIVVFAIVVIGGMGSIGGAILTGLGMGVVEGLTKYF--------------YPEASTTV 274 Query: 324 MVIALFLVILMRSHSLLR 341 + + +V+L + L Sbjct: 275 IFAVMVIVLLTKPAGLFG 292 >gi|110678207|ref|YP_681214.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter denitrificans OCh 114] gi|109454323|gb|ABG30528.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter denitrificans OCh 114] Length = 325 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 132/338 (39%), Gaps = 20/338 (5%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 + +K + L+ + + A + + + + + G+ + +G Sbjct: 1 MNFSKIQILGVLVFLAVVFVGVPVFIAATGRWDFYFTLTSVALLAIASAGVWLTF-YIGR 59 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 +++ +GAY IL + G S W+ +P + + + +++GLP L+ RG Y A+ Sbjct: 60 INIGQGAFALVGAYVSAILVVKAGWSFWISLPAAGLFAALVAVLIGLPILRLRGVYFAMI 119 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 TL+++++ + K + + + F ++ + Y+ Sbjct: 120 TLVLTQVATLTALALPITNGAKGITNIPLPGGISIFGITLIPDFSTLENARMA----FYF 175 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + + ++ + + L + + + R+++ N++ S+ I + ++ FA+SS F G+ Sbjct: 176 TAIILMIITYAALYRLVNSRLGHLCRSMQQNEELASSIGVNITYIRILIFAISSFFGGVG 235 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305 GA F + + P F +++ + LGG+ + T +L +L Sbjct: 236 GAMFGSISQSVYPATFVVKDSVDFMLNCFLGGLGYVFGPMLGTLVLYFGWDLL------- 288 Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 F + L L+I + LL LR Sbjct: 289 --------FEFGKYQMLIYATLLILIIRFLPNGLLSLR 318 >gi|94984840|ref|YP_604204.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300] gi|94555121|gb|ABF45035.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Deinococcus geothermalis DSM 11300] Length = 313 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 111/289 (38%), Gaps = 44/289 (15%) Query: 63 LGLLSLNCVIAYAIGAYSYVILGSRYGL----------SIWLLIPVSAMISGACGMIMGL 112 G LSL YA+G Y IL + L V+A++ G G+ +G+ Sbjct: 31 AGQLSLASPGFYALGGYVAAILLTNPAFSGLRDTLGNGMFPLTWLVAALLCGLLGLFVGV 90 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 P+L+ RG YLA+AT+ EI + + + +T G GI+ + + + Sbjct: 91 PALRLRGIYLALATIAFVEILRVVSLNLA-VTGGAIGIFGIPQAFGFQDRWQ-------- 141 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 ++ + L+ L R+ + A+R IR+++ A ++ K+ Sbjct: 142 ----------YLWLFGPLLLLTLLFARQLERSRVGRAFRAIREDELAADAMGVPPTRYKV 191 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 AF + + G+ GA A + + F +I +++ V++GG ++ A+L Sbjct: 192 LAFVIGAVLAGIVGAMSAPFLNTWNAKQGTFDASIAILAFVLIGGSRNIWGPVVGGALLT 251 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + E+ + + + L + L ++ Sbjct: 252 AIPEVLRFLAD---------------WRLIINGLVLVVASLYLPQGIVG 285 >gi|300702489|ref|YP_003744089.1| branched-chain amino acid transporter permease, membrane component (livh) [Ralstonia solanacearum CFBP2957] gi|299070150|emb|CBJ41440.1| putative Branched-chain amino acid transport system permease, membrane component (livH) [Ralstonia solanacearum CFBP2957] Length = 294 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 108/315 (34%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y M + GL+++ G L +++ + +GA + S Sbjct: 3 IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 L W+++ + + GA GM++ L+F + L+++ ++ G Sbjct: 63 YLDLPYWVMLVAAPLAIGAVGMVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G+ + G T F++ + +V++ + + + +T + Sbjct: 123 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVVASLTVCFATWFLIEKTKL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ L + L + +T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVF--------------YPQASSTVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFG 291 >gi|264677358|ref|YP_003277264.1| inner-membrane translocator [Comamonas testosteroni CNB-2] gi|299533056|ref|ZP_07046442.1| inner-membrane translocator [Comamonas testosteroni S44] gi|262207870|gb|ACY31968.1| inner-membrane translocator [Comamonas testosteroni CNB-2] gi|298718941|gb|EFI59912.1| inner-membrane translocator [Comamonas testosteroni S44] Length = 327 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 106/337 (31%), Gaps = 16/337 (4%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R + K L L+ ++ L L + + +I + A GL++V G + + Sbjct: 2 MRKDLDYKPLLLVPLLALATLPLVGSPSTWLTLTVAGLAMGMIIFVIASGLTLVFGLMDV 61 Query: 66 LSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L+ + A+GA+ + +LG+ + + + + ++ L + + Sbjct: 62 LNFGHGVFIALGAFVATSVLGAMGDWTGSAQLWRNLVAVLPAMVVAMLVAGALGLAFERF 121 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 + ++ + + E + Sbjct: 122 IVRPVYGQHLKQILITMGGMIIGEELIKVIWGPQQIPLPLPEAMKGAWLLGDAAVEKYRV 181 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + +L + A + L RT I R +++ SL + ++ F SA G+ Sbjct: 182 FAVLVGAAVFAVLAWTLARTKIGLLIRAGVQDREMVESLGYRVRRLFVAVFVAGSALAGL 241 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G + + + M N+++ ++I+GG+ S ++ + + Sbjct: 242 GGVMWGLYQQNVVAQM-GAQVNVLIFIVIIIGGLGSTGGALIGALLVGLMANYTGFLVPK 300 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + V+L R + Sbjct: 301 VALFSN--------------IALMVAVLLWRPQGIYP 323 >gi|331002579|ref|ZP_08326095.1| hypothetical protein HMPREF0491_00957 [Lachnospiraceae oral taxon 107 str. F0167] gi|330408307|gb|EGG87783.1| hypothetical protein HMPREF0491_00957 [Lachnospiraceae oral taxon 107 str. F0167] Length = 291 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 84/271 (30%), Gaps = 13/271 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + Y + A G S++ G L L++ + YA GA +I ++ Sbjct: 6 IFNGLALGMGYALIAVGYSLIFGILRLVNFSHGAIYAFGAEMAMIFIGMRFGITAGIVTA 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAI-ATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + I L R A+LI + NI+ + G Sbjct: 66 MILTGVLGICIDKLALEPLRKKKSKPIASLITTIGISNIITNLLIVFLGSE--------- 116 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 ++ + + L L ++ + +T I A R + N Sbjct: 117 --KRNFNNIFGDGSIKFGNTVLTHTQIMMCLVSLALMLILMFIVYKTKIGLAMRATQQNS 174 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 KA + + F F ++ +AGA + P+M F + + +LGG Sbjct: 175 KAAAMMGINVDFVIAFTFFLAGVCATIAGALVGGYYQIVYPNM-GFMAGLKAFAAAVLGG 233 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + SL I+ + + Sbjct: 234 IGSLPGALLGGLIVGVSESMAATFLGSTYRD 264 >gi|197118326|ref|YP_002138753.1| branched-chain amino acid ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197087686|gb|ACH38957.1| branched-chain amino acid ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 291 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 101/305 (33%), Gaps = 24/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ + +GA+ ++L S + +++++ I Sbjct: 6 LVNGVALGSVYALIALGYTMVYGIITLINFAHGEIFMVGAFIGLLLVSFFKVNVFVAIIG 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ L + + ++ LI + L + G Sbjct: 66 AMIFCMIMGVLIELIAYRPLRKSSRLSALISAIGVSIFLSSLALMVFGADAKGFP----- 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + ++ L ++ +++T I A R ++ Sbjct: 121 -----DGAFPVHQIQVGSADISTLQLLIIGVSAALMMALEFIVQKTKIGKAMRATSEDYN 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ SA G + +S +M + + +LGG+ Sbjct: 176 TSALMGINVNRVISFTFALGSALAAAGGVLVGVLFNAVSFNM-GLMAGLKAFAAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ G + + ++ + L LV+L++ Sbjct: 235 GSIPGAML-------------GGLLLGVSEVFGVAIGYSSYRDAIAFTILVLVLLVKPTG 281 Query: 339 LLRLR 343 LL + Sbjct: 282 LLGQK 286 >gi|121607352|ref|YP_995159.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121551992|gb|ABM56141.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 353 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 90/232 (38%), Gaps = 3/232 (1%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 V G G+L Y +GAY+Y ++ G S ++ I+ A + L ++ F Sbjct: 66 FVWGVAGILCFGQAAFYGLGAYTYAVVAINMGGSTLAVVL---AITVAGCAALALGAMMF 122 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + +++ + +L K+ T G+A RL + + Sbjct: 123 YSRMADVYLGVITLVATLLLFKYANSTAGQAYAIGTARLGGFNGIPGFPVLGVPGWPDTL 182 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + + +Y+V + L + WL IR+N+ + AK AF + Sbjct: 183 VTGMALYFVGMVALLLCWLMFRWLAVRPFGRLLAGIRENELRAELSGHDVRLAKTLAFGL 242 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 A G+AG +A + ++P++F + +I V++GG+ +L Sbjct: 243 GGAVAGLAGVLYACWAEIVTPEVFSLGVSAEIIIWVLVGGLGTLWGPMFGAV 294 >gi|89901364|ref|YP_523835.1| inner-membrane translocator [Rhodoferax ferrireducens T118] gi|89346101|gb|ABD70304.1| inner-membrane translocator [Rhodoferax ferrireducens T118] Length = 290 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 91/301 (30%), Gaps = 27/301 (8%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 Q Y + A GL++V G++ +++L + AY + S G + IP++ ++ Sbjct: 15 QGGSYALIALGLALVFGAMKVINLAHGELVLLSAYVAYSVESGLGWNPIFAIPIALVVVC 74 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 +++ + + D + ++ I + I + Sbjct: 75 LASVMVYFVVGRIKKDREINSLILTYGIGVILTNLILLIW------------KADVRSTG 122 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 S + + + WL R+ A R + N+ A + Sbjct: 123 STWLQEAIVIGPFYSMRSEVLFFIVSLVMMGGLWWWLSRSWYGRAVRAVSSNRDAAKLMG 182 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + +L +F V+ +AG A + + + I +L G+ S+ + Sbjct: 183 IDPGYTELVSFVVAGILAAVAGV--ALFSYGVVSPAYGSVLTVKAFIITVLAGIGSIPGV 240 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 +L L + L+ LV+ + L + Sbjct: 241 LIGAVLLGVAEALTVTLASSALQELVGMG-------------LFLLVLFVMPSGLFGAKG 287 Query: 345 P 345 Sbjct: 288 R 288 >gi|294083917|ref|YP_003550674.1| branched-chain amino acid permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292663489|gb|ADE38590.1| branched-chain amino acid permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 287 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 104/298 (34%), Gaps = 24/298 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 IQ IY + A GL++V G L +L + + +G Y ++ + S L + + +I Sbjct: 11 LIQGAIYALIALGLTLVYGLLRILHVAHAALFTLGGYI-GVVVTNGSGSFLLALVTAMLI 69 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 G GM K + + + LI S + I G G+ Sbjct: 70 VGIVGMASYRVIYKPLLNRMPLIALIASIGVFIASEELFRIFFGAYGLSYDTPPLKGQIE 129 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + V++ L + I T + A R + + S Sbjct: 130 ILP----------GIPLSHARILVVVLAVGLLSGIGWMAVHTRMGVATRATVVDPEMASS 179 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + + F + SAF G AG + + + P M + ++I++LGG+ S+ Sbjct: 180 SGVNVETIRYTTFFIGSAFAGAAGVMVSLLNNLVEPTM-GAVPSYKALAIIVLGGLGSVR 238 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A+ L + + + ++ L +++++R LL Sbjct: 239 GALIASLALGIIESFGTIYAGNFLD------------RDSIAFAFLIMILMIRPQGLL 284 >gi|209515794|ref|ZP_03264657.1| inner-membrane translocator [Burkholderia sp. H160] gi|209503821|gb|EEA03814.1| inner-membrane translocator [Burkholderia sp. H160] Length = 294 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 105/316 (33%), Gaps = 26/316 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + L W+++ ++ +I G G+ + L++ + L+++ ++ G Sbjct: 63 YFNLPYWVMLVLAPLIVGLVGIAIERSMLRWLYKLDHLYGLLLTFGLTLVIEGVFHSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLAVCFATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + L + T++ + Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVIEGLTRVY--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLRL 342 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFGR 292 >gi|163794786|ref|ZP_02188756.1| ABC transporter permease protein [alpha proteobacterium BAL199] gi|159180059|gb|EDP64584.1| ABC transporter permease protein [alpha proteobacterium BAL199] Length = 307 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 15/306 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + ++ + A GL++V G + ++L + Y +GAY V G LI Sbjct: 10 VLNGLQLGVLLFLVAAGLTLVFGVMDFINLAHGVQYMLGAYLAVTFYGLTGSFFMALILA 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ L L + + + + Y L Sbjct: 70 LLAALAFGLLLEFLVFRHLYDRDHLDQVLATFGVILFLNEGVRIVWGAAPLSYPIPDLLK 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + Y I+ ++L + + + + RT + R N + Sbjct: 130 GTIPLMD----------GFGYPIYRVAMILSGLATAVLLWVLVTRTRVGMLVRAGATNPR 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L I + F + G AG I+ ++++GG+ Sbjct: 180 MVAALGVDIRRLFMVVFGFGAMLAGFAGVMAGPIFSV--EPGMGDGVLILAFVVIVIGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335 S+ A I+ V L F +++ + + L+ + + V+ R Sbjct: 238 GSIRGAFVAALIIGLVDTLGRSFMTDIFKTMMAPAAANQVGPAIASMLIYLLMAGVLFFR 297 Query: 336 SHSLLR 341 L Sbjct: 298 PTGLFP 303 >gi|91790943|ref|YP_551894.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91700823|gb|ABE46996.1| inner-membrane translocator [Polaromonas sp. JS666] Length = 306 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 134/324 (41%), Gaps = 29/324 (8%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + V+ LL + + + +I+I+ + A L++V+G G+++ IG Sbjct: 3 IIVLVLLLALPWAATASDHAFYTTFATRIMIFALAATSLNLVLGFGGMVAFGHAGFLGIG 62 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY+ IL + S WL P + +ISGA ++GL SL+ +G Y + TL +++ I Sbjct: 63 AYTVGILMDKGFSSAWLSWPAATLISGAIAGLIGLVSLRTKGVYFIMITLSFAQMLYFIS 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 + + G + S RF +YV+LG+C Sbjct: 123 VSLTYFGGDDGMSLPGRSIIQFGPDLASDDRF--------------FYVVLGLCVAVLFF 168 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L ++IR+N+ S+ + KL AF +S A G+AGA A IS Sbjct: 169 LHRLINGRFGRVLQSIRENETRMSSIGYPVFRYKLVAFTISGALAGLAGALIANQNGFIS 228 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P + ++++ ++ ++ILGG+ L + + + + E + ++ Sbjct: 229 PSLMLWTQSGSLMIMIILGGVGYLYGGVLGSVVFLLLEEGLSNVTIHW------------ 276 Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341 + + L V+L L+ Sbjct: 277 ---QLPLGLILLCVVLFAPTGLVG 297 >gi|328952954|ref|YP_004370288.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] gi|328453278|gb|AEB09107.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] Length = 298 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 100/304 (32%), Gaps = 22/304 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ + AY + S + L L + Sbjct: 10 LINGVSLGSLYALIAIGYTMVYGVLRLINFAHGDFLMVAAYLGLFGLSLFSLPWPLAFGL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++G G ++ + + ++ LI + +L + G + +F Sbjct: 70 ALILTGLMGAMLERGAYRPLRRAPRLSLLISAIGVSFLLENLVLVFIGGRPLSFPTPAFF 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G + + Y+ L + A + + + T + A R + + + Sbjct: 130 GGA----------WRFGELYLPRLSVYIPLITLIVLAGLFVLIYSTRVGMALRALAFDWE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + S G+ G +A +++ + +LGG+ Sbjct: 180 TTQIMGVNVNRLISLTFILGSTLAGVGGLLWAMKYPQVN-PFLGILPGLKAFVAAVLGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L + + + L L +V+L+R Sbjct: 239 GSLPGAVVGGVLLGLLEITVVAVFPSWAG-----------YRDALAFGLLIVVLLVRPTG 287 Query: 339 LLRL 342 ++ Sbjct: 288 IMGE 291 >gi|46204502|ref|ZP_00049898.2| COG4177: ABC-type branched-chain amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 342 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/330 (11%), Positives = 90/330 (27%), Gaps = 22/330 (6%) Query: 9 NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68 N + K + +++ + L + + ++ + L Y A GL I G G+LSL Sbjct: 13 NPFMKPVEWVSLALLAGVILVVLPLMLDGFRLNLVGKYLTYAFVALGLVICWGYAGILSL 72 Query: 69 NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 + + +G Y + + L Sbjct: 73 GQGVFFGLGGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQITSLPWFWHPFQSLPLT 132 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167 + +A L L + Sbjct: 133 LLLVVAVPVIFAFIISVAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 192 Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + + +Y+V G+ + +++++ + +R+ + + Sbjct: 193 RTLHGWDIRTDHAKFILYFVNGGLLIGCILMAQYVKKSKLGRILVAMREKEDRVRFSGYS 252 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + K+ AF +++ F + GA F +SP ++ ++ +GG SL Sbjct: 253 VAGFKVFAFCLAAGFAAIGGAMFTLQVGFMSPSFVGIVPSVEMVIYTAVGGRRSLFGAVC 312 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 T ++ + L Sbjct: 313 GTLLVNWAKTSFSESFPDMWLFGLGALFIA 342 >gi|304405846|ref|ZP_07387504.1| urea ABC transporter, permease protein UrtB [Paenibacillus curdlanolyticus YK9] gi|304345089|gb|EFM10925.1| urea ABC transporter, permease protein UrtB [Paenibacillus curdlanolyticus YK9] Length = 308 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 83/289 (28%), Gaps = 16/289 (5%) Query: 59 VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 G + ++++ IGAY+ + + + ++ + + Sbjct: 35 TFGLMNVINMAHGELIMIGAYATYVTQNIFKSALPDSLFNWYFVLSIPVSFGIAFLFGLL 94 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 + I L ++L W + +G T + + + V+ Sbjct: 95 LEASLIRHL-YGRPLDSLLATWGVGLALQQLARSIFGAPNVGVTSPTWLDGGLTVMTGVV 153 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 +++ + ++ L++ R+ R + N+ L + FA+ Sbjct: 154 LPYKRLFIIGLVIVCLFAMYLYIYRSHAGRNMRAVMQNRDMAACLGISTRRVDAMTFAIG 213 Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298 S G+AG A + + +V+LGG+ L + L Sbjct: 214 SGIAGIAGC--ALTLIGPIGPSLGTYYIVDAFMVVVLGGVGKLIGTLFGAIGIGMTNTLF 271 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 L+ I + + R + +R+ S Sbjct: 272 EYWTNASLGK-------------VLVFICIVAFLQWRPKGFVAMRSRSL 307 >gi|238059606|ref|ZP_04604315.1| ABC branched-chain amino acid transporter permease component [Micromonospora sp. ATCC 39149] gi|237881417|gb|EEP70245.1| ABC branched-chain amino acid transporter permease component [Micromonospora sp. ATCC 39149] Length = 394 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 91/328 (27%), Gaps = 29/328 (8%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + + ++ + L M A G+ I G G+L+L + + +G Y+ + Sbjct: 46 VAPLVLSDFRLALLAKYLCVAMVAVGIGIAWGRGGMLTLGQGVFFGLGGYAMAMHLKLAD 105 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---------------EIFQ 134 L + + L L+ Sbjct: 106 AGPGALPDFMQLYGQLDELPWWWRPFASPWFALPATVLLPMAVAFGLGSLVFRRRVRGAY 165 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 ++ + + + FF + + + +Y ++ Sbjct: 166 FAILSQALAAAMVILLVGQQGTTGGTNGLTDIQGFFGYDLDDPVNQRTVYLLIAAALLAL 225 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L R+ +RD ++ L K+ A+ V++ G+AGA F + Sbjct: 226 LAGARQLIRSRYGELLVAVRDGEERVRFLGYDPATVKVVAYVVAAGMAGLAGALFVPAVG 285 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 ISP + +I + V +GG +L + Sbjct: 286 IISPALIGIVPSIEFVIGVAVGGRATLLGPVLGAVAVAWARTALSE-------------- 331 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 F T L + LV+ L L Sbjct: 332 RFPGTWTYLQGLLFVLVVAFLPGGLASL 359 >gi|160897995|ref|YP_001563577.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160363579|gb|ABX35192.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 330 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 97/298 (32%), Gaps = 18/298 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 +I + A GL++V G + +L+ + A+GA+ + G ++ Sbjct: 42 LAMGMIVFIIASGLTLVFGLMDVLNFGHGVFIALGAFVATSVLGAMGDWTGSDQLWRNLL 101 Query: 103 SGACGMIMGLPSLKFRGDYL--AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + M++ + G I + + + ILI + G+ I + + Sbjct: 102 AVLPAMVVAMLVAGAIGLAFERFIVRPVYGQHLKQILITMGGMIIGEELIKLIWGPQQMP 161 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + + E + +L + A + L RT I R +++ Sbjct: 162 LPLP-QGMKGAWLLGDAAVEKYRVVAVLVGLAVFALLAWTLSRTKIGLLIRAGVQDREMV 220 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 +L + + F SA G+ G + + + P M N+++ ++I+GG+ S Sbjct: 221 EALGYRVRRLFVGVFVAGSALAGLGGVMWGMYQQSVVPQM-GAQVNVLIFIVIIIGGLGS 279 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ + + + + ++L R Sbjct: 280 TGGALIGALLVGLMANYTGFL--------------VPKVALFSNIALMVAILLWRPQG 323 >gi|148259499|ref|YP_001233626.1| inner-membrane translocator [Acidiphilium cryptum JF-5] gi|146401180|gb|ABQ29707.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Acidiphilium cryptum JF-5] Length = 291 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 94/305 (30%), Gaps = 20/305 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G +++ G G+L+L I A +G+ GL ++ Sbjct: 7 LIDGFAISTLYALGALGFTLIFGVSGVLNLAHGGLMVIAAMIAWYVGTSIGLGPYVGAAA 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ ++ + + + + + + G + Sbjct: 67 GLAVCLVAALVTYGGIVRP-----IENSRAVPAHERELFVLTATLLWGVMIQEALSYAFT 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + V I ++ + ++ L + RT I N + Sbjct: 122 NSPITVQPLIAGTVSILGVRTPINEIFIAAVAWAVMGALWLLVNRTRIGRRLLAASINPR 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A L + L + + G+AG + S + + +IV+LGG+ Sbjct: 182 ALTLLGFELDQIYLFVWVIYGLLAGIAGVLLGSFLGSGSGYVPGLTG--SAFTIVVLGGL 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+S A I+ + L + + I L +VI MR Sbjct: 240 GSVSGTLIAAYIVGYIETLTAYLVSPSLREVPAL-------------ILLVVVIYMRPQG 286 Query: 339 LLRLR 343 LL R Sbjct: 287 LLGRR 291 >gi|84502157|ref|ZP_01000305.1| possible permease of ABC transporter [Oceanicola batsensis HTCC2597] gi|84389517|gb|EAQ02236.1| possible permease of ABC transporter [Oceanicola batsensis HTCC2597] Length = 345 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 112/322 (34%), Gaps = 17/322 (5%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V+ L++ L A ++IY M L ++ G G+L + +GAY Sbjct: 13 VILTLVVAAILIAAMPLLIGTYTLTVLVIYGMLGLSLGLIWGFGGILCFGQAAFFGLGAY 72 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 Y I G S +I + +G ++ + D ++ + I Sbjct: 73 IYAISAVNIGESTLPMILAVLLTAGFALLLGAMMFYGRLTDVYLGVITLVVTLILFKFIN 132 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 G + RL I+ +YYV + ++ Sbjct: 133 STA---GPQYVIGEARLGGFNGIPGFQTLNVPGDPGAYIWGDALYYVCAVALVIVFLLVT 189 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 WL R++ IR+N+ + + K FA+ +A G+AGA FA+ + ++P Sbjct: 190 WLLRSSFGRIAVGIRENETRMALMGYDVAARKTVLFAIGAAIAGLAGALFASWAEIVTPT 249 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 +F ++ +I I+GG+ + A L + + + Sbjct: 250 LFSLGQSAEIIIWCIVGGLGTRLGPVVGAAGLAYLEFVL--------------GQQSMID 295 Query: 320 HTTLMVIALFLVILMRSHSLLR 341 +T +M + L + +L L+ Sbjct: 296 NTLIMGLVLVIFVLFLPRGLVP 317 >gi|260426167|ref|ZP_05780146.1| inner-membrane translocator [Citreicella sp. SE45] gi|260420659|gb|EEX13910.1| inner-membrane translocator [Citreicella sp. SE45] Length = 297 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 79/270 (29%), Gaps = 12/270 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + Y + A GL++V +GL++ I Y + G L L I ++ Sbjct: 9 VNAVSLGGTYALLALGLAVVFSIMGLINFAHGELMTIAGYVLMYCGLAG-LPFVLSIGLA 67 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + ++M + + + LI S +L V Sbjct: 68 IGAATVAAVLMERIAFRPVRNASGATMLITSFAVSMVLQVLFQNLISVRSQPVLLPP--- 124 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + + + + +++R A R ++ Sbjct: 125 -------LLTDSVRMFGFVIGVNKLLSIAATVVMLIFLDWFMKRQKTGIAMRAAAEDFAV 177 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + AFA+S G+A + + R + P M F+ + ILGG+ Sbjct: 178 ARLMGIRANSVIAGAFALSGLLAGVAAVLWVSQRASVDPLM-GFTPVLKAFIAAILGGLG 236 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSL 309 SL +L + + Sbjct: 237 SLRGAVAGGFLLGFIEIYLAAYLPPEWQEF 266 >gi|322419263|ref|YP_004198486.1| inner-membrane translocator [Geobacter sp. M18] gi|320125650|gb|ADW13210.1| inner-membrane translocator [Geobacter sp. M18] Length = 291 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 100/305 (32%), Gaps = 24/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ + +GA+ ++L + + +++++ I Sbjct: 6 LVNGVALGSVYALIALGYTMVYGIITLINFAHGEIFMVGAFIGLLLVATFKVNVFVAIIG 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+I+ L + + ++ LI + L + G Sbjct: 66 AMIFCMLMGVIIELIAYRPLRKSSRLSALISAIGVSIFLSSLALMVFGADAKGFP----- 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + ++ L + +++T I A R ++ Sbjct: 121 -----DGAFPVHQIKVGNADISTLQILIIGVSAVLMMGLEFIVQKTKIGKAMRATSEDYN 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ SA G + +S +M + + +LGG+ Sbjct: 176 TSALMGINVNRVISFTFALGSALAAAGGVLVGVLFNAVSFNM-GLMAGLKAFAAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ G + + ++ + L LV+L++ Sbjct: 235 GSIPGAML-------------GGLLLGVSEVFGVAIGYSSYRDAIAFTILVLVLLVKPTG 281 Query: 339 LLRLR 343 LL + Sbjct: 282 LLGQK 286 >gi|221194629|ref|ZP_03567686.1| inner-membrane translocator [Atopobium rimae ATCC 49626] gi|221185533|gb|EEE17923.1| inner-membrane translocator [Atopobium rimae ATCC 49626] Length = 291 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 93/289 (32%), Gaps = 12/289 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G + LL+ GAY I ++ G+ L + Sbjct: 7 LLNGLQLGSIYALVALGYTMVYGIILLLNFAHGDIIMAGAYISWIAMAQLGMHPALAALL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + A G+ + + + ++ LI + L + G Sbjct: 67 SIVGCMALGVAIDKIAYAPLREAPRLSVLITAIGVSYFLESGSQLIFGADAKV------- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V S + V + + C + + +++T + A R + ++ Sbjct: 120 ----VPSFVNLTTVSFGAVTLSLTAILTVAITCISTIVLTFLVQKTRLGKAMRAVSEDMG 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + FAV SA G+ ++ + + +P M +LGG+ Sbjct: 176 AARLMGVNVNSTISFTFAVGSALAGIGAILYSMAYHQATPTM-GIMLGTKAFVAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ ++ V + + + F + + Sbjct: 235 GSIPGAVVGGLVVGFVEVSVAALGLSVWQDAVVFLLLIVVLVVKPTGLL 283 >gi|126731238|ref|ZP_01747045.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] gi|126708149|gb|EBA07208.1| branched-chain amino acid ABC transporter, permease protein [Sagittula stellata E-37] Length = 336 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 35/334 (10%), Positives = 86/334 (25%), Gaps = 19/334 (5%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 F+ S + + A G++++ G L + A G +++ Sbjct: 3 FVNALVALSNFVLIPAIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVTILVTW 62 Query: 87 RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 + L IP + ++ +F A + + + Sbjct: 63 LFQSWGIGLGPLPTALLAIPFGIAGTAVLVLLTDRVVYRFYRAQKAKPIIFVMVSIGVMF 122 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 I + + + + ++ + A + Sbjct: 123 IYNGLTRFVLGADDQIFSDGERFIISAGDFKRATGLAEGLGLKTTQAITVIVAILVVAVL 182 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 +L RT + R DN+ + + + + I +AG + + Sbjct: 183 FWFLNRTRTGKSMRAYSDNEDLALLSGINPERVVMVTWLIVAGLITVAGVLYGLDKSY-- 240 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309 F + + + I+GG+ S ++ + M Sbjct: 241 KPFTYFQLLLPIFASAIVGGLGSPLGAIAGGFVIAFSEVGITYAWKKVLGYMMPEALEPS 300 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + + L +V+L R L + + Sbjct: 301 GLVQLLATEYKFAVSFMILVIVLLFRPTGLFKGK 334 >gi|15899554|ref|NP_344159.1| ABC transporter, permease (branched chain amino acid) [Sulfolobus solfataricus P2] gi|13816194|gb|AAK42949.1| ABC transporter, permease (branched chain amino acid) [Sulfolobus solfataricus P2] Length = 345 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 111/337 (32%), Gaps = 24/337 (7%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-----ILGSRYGL 90 I ++ + +Y+M L++ +G G+ + V+AYA GA+ IL YGL Sbjct: 6 SSLILAILLDFSVYLMVVISLNVEIGLTGVPNFGRVLAYAGGAFIAGAVPGRILQIIYGL 65 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG- 149 ++ ++I+ ++ P + L +A + + + + + Sbjct: 66 HGDYILNNPSIIAEINDKLLEQPLMALAILILTLALAGIVGATLGYISSYPALRLREDYL 125 Query: 150 --------------IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + V+ F + +LL + Sbjct: 126 GILLLVAGTSLVVVGITYPPIVGGTVGVQVPAVFNALLGQGASLYYKISILLLVFSLIML 185 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + + + + A+R +R+N+ L I + A A+ G+AG+ +A Sbjct: 186 LLFNLISNSPMGRAFRAVRENEDLVEVLGRDIGVIRGKAMALGGFLAGVAGSLYAFYIGS 245 Query: 256 ISPDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 + F + + ++ILGG + I + + ++ Y Sbjct: 246 VFAGAFDNLTWSFNPYLMLILGGAGTSIGALLGALIYSTLYHV---IDLYKQTIGYYLHF 302 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 L + L +++++R ++ + + Sbjct: 303 DAVWLQYMLFGLVLTIILILRPQGIVVEKAKPLVKPK 339 >gi|304394451|ref|ZP_07376372.1| inner-membrane translocator [Ahrensia sp. R2A130] gi|303293361|gb|EFL87740.1| inner-membrane translocator [Ahrensia sp. R2A130] Length = 306 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 115/307 (37%), Gaps = 15/307 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + ++ + A GL+++ G +GL++L Y +GA++ + + G + Sbjct: 11 LNGLQFGVMLFLMAAGLTLIFGVMGLINLAHGSLYMVGAFACAAVAAATGSWWLGVAASL 70 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + A ++ + L + +L + I G + L Sbjct: 71 VFAAAAGAVVELAVIRR----------LYKRDHLDQVLATFALILVFSEGTRWLFGSFPL 120 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 +V + + Y +F +++ L+A +++++ RT + R + +++ Sbjct: 121 YLSVPQGLSGAVTLPGGIQYPLFRLFIIGVGLALAAGLMIFIARTRVGARIRAGQSDREM 180 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L I FA+ +A G+AGA A+ + I+ ++I+GG+ Sbjct: 181 ISALGVNIDRLYTLVFALGAALAGLAGALVASLQSV--QVGMGEPVLILAFVVIIIGGLG 238 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRS 336 S+ I+ L M F ++ + + + L+ I + V+++R Sbjct: 239 SIPGAFVGALIVGLSDTLGRSMLPALFAQFMEPSSATAVGSSLSSMLIYIVMACVLVVRP 298 Query: 337 HSLLRLR 343 L + Sbjct: 299 TGLFGAK 305 >gi|182626115|ref|ZP_02953876.1| ribose ABC transporter, permease protein [Clostridium perfringens D str. JGS1721] gi|177908636|gb|EDT71157.1| ribose ABC transporter, permease protein [Clostridium perfringens D str. JGS1721] Length = 311 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 93/312 (29%), Gaps = 27/312 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + V+ +++ + S I ++ Q+ + + A G++ V+ G + L+ A Sbjct: 15 LIGLVLLCIVITIVTPNFLSVSNITNVFTQVSVNAIIAIGMTFVI-LTGGIDLSVGSTLA 73 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 I + G ++L I V+A+I A G+I GL K + Sbjct: 74 ISGAVGASIVKSTGN-VFLAIIVAAVIGIAVGLINGLLVSKGKLQ-------AFIVTLAT 125 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + I G ++ + F P I + L Sbjct: 126 MTIFRGATLVFTDGTPISKLPEAFVKIGNGKLGFMSIPVIITIIIAIIAVYAL------- 178 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +T + N+ A K + VS +AG + Sbjct: 179 ------SQTRFGRYLYALGGNEDASRLSGINTDKIKTLVYVVSGFASAIAGVIITSRIGS 232 Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 SP+ E + ++VI GG +++ I+ + MN F + Sbjct: 233 ASPNAGTGFELDAIAAVVIGGTSLAGGEGTITGTLIGALIIGVLNNGLNLMNVSPFYQSI 292 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 293 VKGLVILIAVLL 304 >gi|158425728|ref|YP_001527020.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158332617|dbj|BAF90102.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 371 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 95/328 (28%), Gaps = 36/328 (10%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84 + +M + L Y A GL + G+ G+LSL + + +G Y + Sbjct: 30 PFRLNMVGKYLTYAFVAVGLVLCWGNAGILSLGQGVFFGLGGYCMAMYLKLEASTPEATK 89 Query: 85 GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144 + + L A + F + + Sbjct: 90 IQSTPGIPDFMDWNQLTSLPFFWVPFKSLGFSVIAVMLVPAVFALVLAFALFKRRVGGVY 149 Query: 145 NGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +A + L + + + +Y+V +G+ Sbjct: 150 FAIITQALAAIMSILIIGQQGYTGGVNGITDLRTLHGWDIRTDSAKFILYFVNVGLLIGV 209 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + +++R+ + +RD + + K+ F ++A G+ GA F Sbjct: 210 ILLCQFVQRSKLGRILVAMRDKEDRVRFSGYDVASFKIFVFCFAAALAGIGGAMFTLQVG 269 Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314 +SP + +I ++ +GG SL T ++ F Sbjct: 270 FMSPSFVGITPSIEMVIYTAVGGRLSLLGAVYGTLLVNWAKT--------------SFSE 315 Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342 SF + V+L+ + L L Sbjct: 316 SFPELWLFGLGGLFIAVVLLFPNGLAGL 343 >gi|317402823|gb|EFV83366.1| ABC branched chain amino acid family transporter [Achromobacter xylosoxidans C54] Length = 632 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 106/319 (33%), Gaps = 26/319 (8%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 P+ + +T + I Y + + GL+++ G L +++ Y GA+ Sbjct: 7 PVFEIFGVPSTALFGQLLLGLINGSFYALLSIGLAVIFGLLNIINFAHGAQYTAGAFLAW 66 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 +L + G++ W + + +I A +++ + + L+++ ++ Sbjct: 67 MLLNYLGVNYWAALVLVPLIMAAFAIVVERVLISRTYRMDHLYGLLLTFGLALLIEGGLR 126 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 G +G+ F+ + + + L ++ + + Sbjct: 127 QAYGVSGLPYTIP----------KALTGGVNLGFMFLPWYRGWAVAVSLVLCLAVWVLIE 176 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 +T + R +N S + +A+ A +AG A M Sbjct: 177 KTRVGAMLRAATENPTIVRSFGINVPLLITLTYALGVALASVAGVIAAPIYQV--SPMMG 234 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + ++V ++V++GGM S+ + L + L + Sbjct: 235 SNLVVVVFAVVVIGGMGSIMGAIVSGFGLGIIEGLTKVF--------------YPEAANL 280 Query: 323 LMVIALFLVILMRSHSLLR 341 + I + LV+L + L Sbjct: 281 AIFIIMVLVLLCKPAGLFG 299 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 119/302 (39%), Gaps = 29/302 (9%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + +++L + +FA +++VG +GLLS + AY+ I+ G + L + Sbjct: 345 TFLMKVLCFALFAAAFNLLVGYVGLLSFGHAAFFGAAAYATGIVMKLLGATPELGLLAGV 404 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + G G++ G +++ +G Y A+ TL +S++ I ++ T G+ G+ R Sbjct: 405 LTGGLLGLVFGAIAIRRQGIYFAMITLALSQLVYFIAVQA-GFTGGEDGLQSVPR----- 458 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 F + + MYY L + L + +L + + R++RDN++ Sbjct: 459 --------GKLFGLFDLDSVMPMYYFTLAVFALGYAFVLRVLNSPFGEVIRSVRDNEQRA 510 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 SL + KL AF +S+A G+AG S + N V+ + +LGG+ + Sbjct: 511 RSLGYSTSRYKLLAFTLSAAVAGLAGGLKVLVFGVASLTDVHWHANGEVVLMALLGGIGT 570 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + + + + L +L+ ++ Sbjct: 571 VFGPLAGAFTFVSLQNYLAPL---------------GSWVLIVQGAIFILCVLLFRDGIM 615 Query: 341 RL 342 L Sbjct: 616 GL 617 >gi|306841258|ref|ZP_07473969.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO2] gi|306845437|ref|ZP_07478011.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO1] gi|306274180|gb|EFM55996.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO1] gi|306288660|gb|EFM59991.1| branched-chain amino acid ABC transporter, permease protein [Brucella sp. BO2] Length = 342 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 115/312 (36%), Gaps = 10/312 (3%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + + L+ + ++LF + + + S + + G++++ G LG Sbjct: 13 PSLRSNNHALQPLIVIGLAMVLFATAVSLLANAFWLSATTSAMALSLSVAGVALLYGQLG 72 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 L+SL +G + + +G + + + + + G++ G+P+L+ RG YLA+ Sbjct: 73 LVSLCQFALVGVGGWVTLRIGHGFHPPFEISLMAGGVAAAFIGLLFGIPALRLRGLYLAL 132 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 TL+++ FQ ++ W G R + + Sbjct: 133 VTLMLAGAFQIVISAWGFPDGGPG----------FLGRADGAGRAMLARPALATEATPYF 182 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 L ++ + T AW IR + S ++ K AFA+S G+ Sbjct: 183 LYTCLFATLGLMLVQAHKMTRPGRAWALIRKGETVAISSGVNVLVYKAWAFALSGFLAGI 242 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 AG A + ++ F E++ + ++ +GG A +L + L + Sbjct: 243 AGGLLAGNVGQLEGRAFSAFESLNLFALATVGGAFHWYGAIIAGLLLRALPALLTDLGID 302 Query: 305 YFNSLLKFDCSF 316 + ++ F + Sbjct: 303 GYVTIGIFGVAL 314 >gi|254440914|ref|ZP_05054407.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] gi|198250992|gb|EDY75307.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] Length = 361 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 88/313 (28%), Gaps = 11/313 (3%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L L L S + + Q+ I + A S+V+ + G + L+ Sbjct: 46 LFVLVTSIVLFGLLLGTKFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIA 104 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYGL + + + + G + G + + + + Sbjct: 105 VLSSVVMGQFTFRYGLPVEVAVTAGLIFGTLIGSMNGWLIAVMKLPPFIVTLGMWQIVLA 164 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + K T I L F + ++ M + Sbjct: 165 ANFLYSKNATIRSQDIEQQAPLLQFL-----GTTFKIGADVDGRGGATFTFGVIAMVLIF 219 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + L +TA + D+ +A + +S +AV+ +AG Sbjct: 220 AVLSYILSQTAWGRHIYAVGDDPEAAQLSGVNVKRTLISVYAVTGFICAIAGWALIGRIG 279 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP + + ++VI GG S+ I+ + Sbjct: 280 SVSPTSGQLLNIESITAVVIGGISLFGGRGSIMGPLFGALIVGVFTLGLRLAGADAQWTF 339 Query: 310 LKFDCSFNMRHTT 322 L Sbjct: 340 LLIGALIIGAVAV 352 >gi|284992221|ref|YP_003410775.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160] gi|284065466|gb|ADB76404.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160] Length = 296 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 21/301 (6%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 IY + A G I+ + ++S +GAYS L L + I+ Sbjct: 16 AIYALIALGFVIIFKASEVVSFTHGSLLLLGAYSIARLSEPL--GFLLAVLAGLAITAVA 73 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 +++ + I+ I++ IL+ G V Sbjct: 74 ALVVERFIINRLRGAPVISLAIVTIGVDIILLTELIRRIGPD-----------ILNVPHP 122 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + ++ L A+ + ++ A R ++ + + Sbjct: 123 WGGESVRIGGIGITQNRLIAMIVAGVLIAAFFAAFKYSSWGVAMRASAEDGETAALMGIR 182 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 A+ V+ G+A A F ++ + ILGG+ S Sbjct: 183 QGRVSALAWVVAGVLAGVA-ALFLVGSPTPGVSSAVYATALRAFPAAILGGLDSTGGALV 241 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 ++ L G F + + V+L+R L + + Sbjct: 242 GGLLIGLAESLAAGYQEQLLFLGRGFGEVVP-------YVVMIAVLLVRPSGLFGTKELT 294 Query: 347 N 347 Sbjct: 295 R 295 >gi|15807114|ref|NP_295843.1| branched-chain amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6459918|gb|AAF11670.1|AE002047_3 branched-chain amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 310 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 118/315 (37%), Gaps = 45/315 (14%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---------- 90 ++ + ++ + L + G LSL YA+G Y IL + Sbjct: 10 ALIVMMVQAGLLGLSLYFPL-QAGQLSLATPGFYALGGYVAAILLTNPAFAGLRDTLGNG 68 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 L +A++ G G+I+G+P+L+ RG YLA+AT+ +I Q + + IT G GI Sbjct: 69 MFPLTWLAAALLCGVLGLILGIPALRLRGIYLALATIAFVQIMQILALNL-SITGGAIGI 127 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + + + + ++ + L+ L R+ + A+ Sbjct: 128 FAIPQAFGFDQ------------------PLQYLWLFGPLLLLTLLFARQLSRSRVGRAF 169 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 IR+++ A ++ K+ AF + + G+ GA A + + F +I V+ Sbjct: 170 HAIREDELAADAMGINPTHYKVLAFVIGAVLAGLVGALSAPFLNTWNAKQGTFDASIAVL 229 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + V++GG ++ A+L V E+ + + + L + Sbjct: 230 AFVLIGGSRNMWGPVVGGALLTAVPEVLRFLAD---------------WRLVINGLVLVV 274 Query: 331 VILMRSHSLLRLRTP 345 L ++ Sbjct: 275 ASLYLPQGIVGALER 289 >gi|83749554|ref|ZP_00946541.1| LivH [Ralstonia solanacearum UW551] gi|83723790|gb|EAP70981.1| LivH [Ralstonia solanacearum UW551] Length = 294 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 108/315 (34%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y M + GL+++ G L +++ + +GA + S Sbjct: 3 IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 L W+++ + + GA GM++ L+F + L+++ ++ G Sbjct: 63 YLDLPYWVMLVAAPLAIGAVGMVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G+ + G T F++ + +V++ + + + +T + Sbjct: 123 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVVASLTVCFATWFLIEKTKL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ L + L + +T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSIITGLGLGVIEGLTKVF--------------YPQASSTVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFG 291 >gi|254250990|ref|ZP_04944308.1| inner-membrane translocator [Burkholderia dolosa AUO158] gi|124893599|gb|EAY67479.1| inner-membrane translocator [Burkholderia dolosa AUO158] Length = 294 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W ++ ++ +I GA G+ + L++ + L+++ ++ G Sbjct: 63 YFGLPYWAMLVLAPLIVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSVYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSQLSGAT----------DLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLMLGVIEGFTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + +V+L+R L Sbjct: 277 IMAIVLLIRPAGLFG 291 >gi|312883467|ref|ZP_07743192.1| ribose ABC transporter permease protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309368690|gb|EFP96217.1| ribose ABC transporter permease protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 326 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 32/312 (10%), Positives = 95/312 (30%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + V +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 28 LIALVFLIVVVSFLNPNFFTIDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 86 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + + + +P + G + G+ K + + M+ Sbjct: 87 LCG-AIAASMIAIEIPVLVAVPTALFAGALLGALSGIIIAKGKVQAFIATLVTMT----- 140 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G +Y R G T + + + + ++ +++ Sbjct: 141 -------LLRGVTMVYTDGRPISTGFTDTADTFSWFGTGYALGIPVPVWLMVIVFAAAWY 193 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + T + N+ A + K+ +++ +AG A+ Sbjct: 194 LL----NHTRFGRYIYALGGNESATRLSGINVDRVKIGVYSLCGLLAALAGIIVASRLSS 249 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 250 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 309 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 310 AKAAVILLAVLV 321 >gi|312199655|ref|YP_004019716.1| inner-membrane translocator [Frankia sp. EuI1c] gi|311230991|gb|ADP83846.1| inner-membrane translocator [Frankia sp. EuI1c] Length = 751 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 105/306 (34%), Gaps = 26/306 (8%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY- 79 V ++ L + + L + + IV G G +SL +GA Sbjct: 327 VAGFVMLLAPMLFAPSDLRHAFMVPAL--ALIFLSIVIVTGYSGQVSLGVAGYAGLGALF 384 Query: 80 ----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + L L I V A++ G++ G P+++ RG LA+ T + + Sbjct: 385 SLKLASGGMVGIPHLPGLLAILVGAILVAPIGLVTGYPAIRRRGLTLALVTFAVGAVVSR 444 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + +L + + + + Y + L L Sbjct: 445 FVFEQPSLAG-------------------NLTVNPLYIGGWELGDKSFYVIELLGLGLGM 485 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L R + A +RDN ++ + KL AF +SS G+ GA A S Sbjct: 486 LAVRNLHRGRLGRALLAVRDNTGGAAAVGVDVRNLKLLAFTMSSVVAGLGGALLAYSASS 545 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 S D F+ ++++ + V++ G S A ++ + + + +L Sbjct: 546 FSSDTFQPIQSLLWFTAVVVFGADSAVGAIVGAAFIVAIDVMAPSGSSTLAVGILALALG 605 Query: 316 FNMRHT 321 + Sbjct: 606 WLPGGL 611 Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 71/250 (28%), Gaps = 9/250 (3%) Query: 53 AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112 GL + + G+L+L + AY Y + +GL +WL + + +G+ Sbjct: 21 GIGLLVTYRTNGVLNLAQGGIATLIAYVYREMAVVWGLPVWLS---AVLALAVLSPGIGV 77 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 + LA +E L AGI+ + Sbjct: 78 LLERLVFRPLARRRASAAESLVASLGVMVLTLGMCAGIWGLGAQTDTPAVFPNKSVGIGG 137 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 V + +L+ + L RT R + D+++ + Sbjct: 138 HHVGVDTISTLIVILVACVS----LGLLQSRTKFGRQMRAVVDDRQLAELSSVPADRVAA 193 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 + +A + G G A + + ++V+ + SL A + Sbjct: 194 AGWAFGTTLAGFTGILLAPRVSLSPYSLS--LVVLETFAVVVAARLVSLPAAVFAGLAIG 251 Query: 293 GVVELCCGMN 302 + Sbjct: 252 ILQSELTQFT 261 >gi|148243551|ref|YP_001228708.1| Urea ABC transport, permease component UrtC [Synechococcus sp. RCC307] gi|147851861|emb|CAK29355.1| Urea ABC transport, permease component UrtC [Synechococcus sp. RCC307] Length = 375 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 42/321 (13%), Positives = 92/321 (28%), Gaps = 31/321 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------GSRYGLS 91 + ++ + L + A G+ ++ G GLLSL I +A+G Y + + Sbjct: 33 FRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQGIFFALGGYGAAMYLQLNSSSGQPNGI 92 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 P +L + L + K + Sbjct: 93 PEFFSLYGVDRLPFFWEPFHNPLFTLIAIWLVPSLLAALLGNMVFRNRIKGVYFSILTQA 152 Query: 152 VADRLYFLGTTV-----------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200 + + + F + + ++V + FL+ + W Sbjct: 153 ALLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSPEMQRYFFWVTCVLVFLAWLFVRW 212 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 + + + IRD++ K FA++ G+ GA F +SP Sbjct: 213 VVKGRFGDVLIAIRDDEPRLRFTGFNPTLFKTIVFAIAGGLAGIGGALFTVQSGIVSPQY 272 Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320 +I ++ V +GG +L +++ L ++ Sbjct: 273 MAVPFSIEMVIWVAVGGRGTLVGAIFGAVVIMYAKSLVSE--------------AWPQGW 318 Query: 321 TTLMVIALFLVILMRSHSLLR 341 + LV+ + ++ Sbjct: 319 LFIQGGLFILVVTVLPEGVIG 339 >gi|145594348|ref|YP_001158645.1| inner-membrane translocator [Salinispora tropica CNB-440] gi|145303685|gb|ABP54267.1| inner-membrane translocator [Salinispora tropica CNB-440] Length = 293 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 98/307 (31%), Gaps = 23/307 (7%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 + + Y + A GL+++ G L +++ Y +GA+ +L + G+ W + V Sbjct: 10 NGLVSGAFYALLALGLAVIFGMLRVVNFAHGAFYMLGAFGAYVLLAEAGVPFWAALVVVP 69 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + GM + + + +++ IL + G G Sbjct: 70 LALALLGMALERAFIHRLTRLDPLYNFLLTFGLTLILQDLVKLRYGVQSSPYEAPAGLRG 129 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + + ++L + + L RT + R + + Sbjct: 130 ----------SVDLGIFDFPTYRVFILGFAVAVCVGVWWALARTRVGMVVRAATERPELT 179 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 +L + F A G+AG A R + I+V ++V++GG+ S Sbjct: 180 RALGINVGRWITPVFGFGIALAGLAGVLAAP--MRAVNPLMGADLIIVVFAVVVIGGLGS 237 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + A + V +F + T++ I + V+L R L Sbjct: 238 IFGSVTAGFGIGMVQAWAEAYL-----------SAFPIVSQTIVFIVMAAVLLWRPAGLF 286 Query: 341 RLRTPSN 347 + Sbjct: 287 GRAEAAA 293 >gi|121608074|ref|YP_995881.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gi|121552714|gb|ABM56863.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 339 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 98/315 (31%), Gaps = 18/315 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + + + + ++ + + A + V+ + G + L+ Sbjct: 24 RQKLLAFASLLALMAFFSMASRNFLQTDNLVAILQATAVNGVLAIACTFVIITSG-IDLS 82 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 A ++ + G + L I + + CG+ G K + Sbjct: 83 VGTLMTFCAVMTGVVLTHLGWPLPLGIAAAILTGALCGLTSGTLIAKLKIPPFIAT---- 138 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + G + + R + T + +I + + +L Sbjct: 139 --------LGMMMLLKGLSLVISGTRPIYFNDTEGFSAISQDSLIAALIPALPIPNAVLI 190 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 + ++ + L L RT + + N++A + F K+ + VS A G+AG Sbjct: 191 LFVVAVAASLVLNRTILGRYTFALGSNEEAVRLSGVNVDFWKIVVYTVSGAICGIAGLLI 250 Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304 A+ + P + + E + ++VI GG ++ I+ + ++ Sbjct: 251 ASRLNSAQPALGQGYELDAIAAVVIGGTSLAGGTGTILGTIIGAFIMSVLTNGLRILSVA 310 Query: 305 YFNSLLKFDCSFNMR 319 + + Sbjct: 311 QEWQTVVTGVIIILA 325 >gi|212702298|ref|ZP_03310426.1| hypothetical protein DESPIG_00309 [Desulfovibrio piger ATCC 29098] gi|212674291|gb|EEB34774.1| hypothetical protein DESPIG_00309 [Desulfovibrio piger ATCC 29098] Length = 301 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 96/307 (31%), Gaps = 16/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + IGAY + L L+ L V Sbjct: 8 LLNGLAVGGIYALVALGYTMVYGVLKLINFAHGDLFTIGAYLGLTLLVSCNLAGVLPPVV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + IM + + ++ + + Sbjct: 68 AVLAVFIMVGIMVAIIGCLLERAAYRPLRKAGRL--SAVVSALGASIFFQNAVMLVYGAR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L F + V+ L ++ +++RT I A R + +Q Sbjct: 126 FYVYPDWLRPDFTVDLFGIAVPGVRLMVIAASVILMLALWAFIQRTRIGAAVRAVAIDQG 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + G AG +I M +S + + ILGG+ Sbjct: 186 AARLMGINVDRIISLVFFIGPGLGGAAGLMVGIYYGQIDFTM-GWSYGLKAFTAAILGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + L G + + F L L++++R Sbjct: 245 GNIPGAMIGGLLLGVIEALAAGYIAIAWKDAIAFT-------------VLILILIIRPTG 291 Query: 339 LLRLRTP 345 +L RT Sbjct: 292 ILGERTA 298 >gi|293603309|ref|ZP_06685737.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818219|gb|EFF77272.1| branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 293 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 113/300 (37%), Gaps = 41/300 (13%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 ++ + + + A + + + G+L++ IGAY+ +L Y + + Sbjct: 13 NLVLTLGTNALLALSIWLTLA-CGMLAMANAAFMGIGAYTAALLTMNYDAPFSVALAGGM 71 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 ++GLP+L+ G YLA+ATL E+ + ++ + IT G G+ +L Sbjct: 72 AAPALVAALIGLPTLRLSGVYLAMATLGFGEVVRVTILNTESITGGALGLNGIPQLTQWW 131 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 ++ + ++ +R + I ++ IR ++ A Sbjct: 132 H-------------------------VVLAVVIVLFVLWRVRASKIGRSFDAIRGDETAA 166 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + + K+ AF + G+AGA A I P+ + F + ++++ ILGG+ Sbjct: 167 GLMGIDVRANKMLAFVAGAMIAGLAGALNAHLTFFIGPNEYGFDRGVEILTMAILGGIGG 226 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 L+ + I+ + EL G + L +++L + Sbjct: 227 LAGPVLGSFIITVLPELLRGFAD---------------LRLVANGVILVVIVLFLPQGIW 271 >gi|298292396|ref|YP_003694335.1| urea ABC transporter permease UrtB [Starkeya novella DSM 506] gi|296928907|gb|ADH89716.1| urea ABC transporter, permease protein UrtB [Starkeya novella DSM 506] Length = 308 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 34/298 (11%), Positives = 90/298 (30%), Gaps = 17/298 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I ++V+ A GL+I+ G +G++++ +GAY + + L + Sbjct: 22 LILFSVFVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYFTSQFFLNHLPALFTAYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + I F + + +L W + +G Sbjct: 82 AMILAFIASGALGMFIEWA--MIRRLYKRPLDTLLATWGLSLILQQVYRSVFGPREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + +I +V+ ++ + + + +++ R + N+ + Sbjct: 140 LPEWMMGSLPLTDTIEVQINGLFVMGLTIAITIVVAVLMYKSSWGKQVRAVVQNRVMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + G+AG+ F + + +V+ GG SL Sbjct: 200 VGINTEKVDRYTFGLGCGIAGVAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAQSLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + L ++ + +++++R L Sbjct: 258 GTIASAFTISQAQSTLEFFLSGSMAK-------------VLTLLGVVIILMLRPQGLF 302 >gi|260575367|ref|ZP_05843366.1| inner-membrane translocator [Rhodobacter sp. SW2] gi|259022287|gb|EEW25584.1| inner-membrane translocator [Rhodobacter sp. SW2] Length = 707 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 91/316 (28%), Gaps = 21/316 (6%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 + I L VV + + Q+ + + GL++V+ G + L Sbjct: 31 NAIPFLALVVTVATFGTLIPGFFKPLSLQESTRQLGEFSLVVIGLTVVM-LGGGIDLAVG 89 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 +A+ A++ V + L +W+ S + A G I G R + Sbjct: 90 SIFALSAFAAVSCFFIFELPVWVAFAASLAVGAAFGAINGYLIGYLRLRAFLTTLVTFII 149 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 IY + F S + + + + Sbjct: 150 ---------------GRAIYDILVVAFASRVQMSSATSPIWDFIGDGTALGISVPVWAAF 194 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L+ + L R+ + ++++ ++ + + S AG A Sbjct: 195 GLAIVTHIALTRSRPGWHVLAVGGSRRSAYNAGIKVRRTVFLTYVFSGLTAATAGFLIAT 254 Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 P + E + + V+ GG S++K I++ + + + Sbjct: 255 RLSGAGPGTGQGLEIAALTAAVVGGNSLGGGRGSVAKGLMGAIIVLVMTNGLIRLGYGTG 314 Query: 307 NSLLKFDCSFNMRHTT 322 + + + T Sbjct: 315 TNQMVLGLLLAVAVTI 330 >gi|78066030|ref|YP_368799.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77966775|gb|ABB08155.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia sp. 383] Length = 409 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 109/342 (31%), Gaps = 27/342 (7%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 + + + + Q V+ A ++ +G+ GLLS Sbjct: 2 RNRTLAGVARWSLFAACVALPAWLWPHGAVLGYLAQTAALVVLALSYNLQLGTTGLLSFG 61 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 +GA++ + +G + LL V + G GL + + G A+ TL + Sbjct: 62 HAAFAGLGAFAAAHWFNHFGGPLPLLPLVGGVAGAGFGFAAGLLATRRAGTAFAMITLGL 121 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 E G G+ + + + Y V+ Sbjct: 122 GECVAAAAWSVPAWFGGIGGVPI------------DRASGTPWGGWHFGAPVQAYAVIAA 169 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 C SA + L RT ++ +RDN +L T +L+ +S F G+AG Sbjct: 170 WCLASAWAMHALTRTPLARLANAVRDNPVRVAALGTDPRRVRLAMVTCASFFAGVAGTLT 229 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 + +PD + + V+ ++GG + A A+L + + G++ + Sbjct: 230 LIDVEIATPDSVSMARSATVLIAAVIGGTGAFFGPAAGAAVLTALSIVVAGVSRAW---- 285 Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 + + ++++ + + R Sbjct: 286 -----------ALYLGVLFVVIVVAAPRGIAGIAQALAQAWR 316 >gi|83595055|ref|YP_428807.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] gi|83577969|gb|ABC24520.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170] Length = 300 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 98/302 (32%), Gaps = 20/302 (6%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + +Y M A GLS+V G L + + G+Y+ V+L ++ Sbjct: 12 INAISLGSLYAMVAVGLSMVFGILRMTNFAHGDMMMAGSYATVLLTVAGLPFGVAVVCGV 71 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + + + R + L+ S +L + + + + Sbjct: 72 GVSVLVGVLAERIAYRPVR-GAPDVTLLLTSLALTYVLENLAILIFSSSPRAMPLPDWMG 130 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + F + + + + ++ RT R ++ A Sbjct: 131 EV--------YSFSDGAITFTGIDLCATVLALCSLLGLGWFVTRTTTGLGMRAAAEDMAA 182 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + ++AFA++S F G+AG +AA + P M FS + I+GG Sbjct: 183 TALVGLNLNRLIVTAFAIASGFAGLAGVLWAAQSGVVDPGM-GFSPLLKAFVAAIVGGFG 241 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S++ +L + L G + ++ L L +L R L Sbjct: 242 SIAGAVMGGYLLGALEILIVGFGPP----------EISPYRDAIVFALLILFLLFRPGGL 291 Query: 340 LR 341 +R Sbjct: 292 MR 293 >gi|269792250|ref|YP_003317154.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099885|gb|ACZ18872.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM 6589] Length = 297 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 95/305 (31%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y + A G ++V G L L++ + +GAY + + + + Sbjct: 10 LFNALMLGSLYGLVAIGYTMVYGILRLINFAHGDVFMLGAYGVFWSFTLFNFPWSAAVVL 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G+++ + + D I+ LI + + + V Sbjct: 70 SVVAVAGIGIMVDRIAYRPLRDAPRISALISAIGVSFFIENVCIVVFSGIPRPVPSP--- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V V + L A + + RT A R I + + Sbjct: 127 -------EWLVRVVELGNVRILPLAVVVPVVSLLLVAFLFWVVYRTKPGLAMRAISKDIE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + SA AG ++ +I P M ++GG+ Sbjct: 180 TTRLMGVKVDHIIAMTFGLGSALAAAAGIMWSLRYPQIHPLM-GIFPGFKAFIAAVIGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L + + + F + + + L L++L + Sbjct: 239 GSIHGALVGGMMLGFIEIMI-----------VAFMPTLSGYRDAFAFVLLILILLFKPTG 287 Query: 339 LLRLR 343 L+ + Sbjct: 288 LMGEK 292 >gi|170699013|ref|ZP_02890070.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] gi|170136049|gb|EDT04320.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10] Length = 294 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 GL W ++ ++ +I GA G+++ L++ + L+++ ++ G Sbjct: 63 YLGLPYWAMLALAPLIVGAFGILVERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSIITGLLLGVIEGFTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + +V+L+R L Sbjct: 277 IMAIVLLIRPAGLFG 291 >gi|149375698|ref|ZP_01893467.1| branched-chain amino acid ABC transporter,permease protein [Marinobacter algicola DG893] gi|149360100|gb|EDM48555.1| branched-chain amino acid ABC transporter,permease protein [Marinobacter algicola DG893] Length = 308 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 96/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 ++V+ A GL+I+ G +G++++ +GAY+ + S + + L Sbjct: 22 LSLFSVFVLMAMGLAIIFGQMGVINMAHGEFMILGAYTTYLTSSFFQSYLPGLFGGYFFF 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + ++ + + +L W + +G Sbjct: 82 AIILAFLICAALGALVEW--LMIRHLYHRPLDTLLATWGLSLIMQQAYRSIFGAREVGVD 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + V I +V++ ++ ++ L + R+ R + N+ + Sbjct: 140 LPEWMMGAFQVTDLVELPINGLFVMIIALSIAVAVYLLMYRSGWGKNVRAVVQNRPMAEA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + FA+ G+AGA F + + + +V+ GG SL Sbjct: 200 VGINSAGIDRATFALGCGIAGIAGAAFTMIGS--TGPSSGQAYIVDTFLVVVFGGAQSLI 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++ + ++++R L+ L Sbjct: 258 GTIISAFGISQAQSTMEFFLSGSMAK-------------VLTLLVVVGILMLRPEGLMAL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|110669067|ref|YP_658878.1| ABC-type branched-chain amino acid transport system, permease protein I [Haloquadratum walsbyi DSM 16790] gi|109626814|emb|CAJ53282.1| ABC-type branched-chain amino acid transport system, permease protein I [Haloquadratum walsbyi DSM 16790] Length = 294 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 19/306 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +++ + + ++ A G +++ G + +++L +G YS + Sbjct: 5 QFVVNGLLVGALFTAVAVGFALIWGVVDIINLAHGEMVMLGGYSSY-WILNFLTGDAEGS 63 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +I+ + + L + ++ I Sbjct: 64 VTLFLITIPLVIGIVFVIGYALQRILVARVIGTDIFLTLLVTFGISI---AIQQLAIQAW 120 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 ++ L + ++ +G L+ ++ ++L+RT A R + N Sbjct: 121 SANPRAIQILFTDPSLSVAGIVIPKMKLISFIGAIGLTVALYVFLQRTRTGRAIRAVSQN 180 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 +A + + + F +SSA AGAF A + + IV+ G Sbjct: 181 PEAAALVGIDVEHTRAVTFGISSAIASGAGAFIATILNI--QPQMGLIYTLKSFVIVVFG 238 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ + +L V EL G+ + + F L ++++++ Sbjct: 239 GVGSIPGVFIGGLMLGTVEELTAGLVSSQWTLAVSFS-------------LLIVLLIVKP 285 Query: 337 HSLLRL 342 L Sbjct: 286 TGLFGE 291 >gi|284167399|ref|YP_003405677.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] gi|284017054|gb|ADB63004.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] Length = 289 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 94/301 (31%), Gaps = 27/301 (8%) Query: 45 QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104 + + A GL+++ G L +++ Y +GAY ++ G L+ ++ Sbjct: 15 LGMTLALIAAGLTLIFGMLDVINFAHGALYMLGAYFGAVIAVNLGSFWLALVLAPLLVGL 74 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164 I L G L+ I I G+A L Sbjct: 75 IGAAIEVLSLRPLYGRNPLYHILLTFGFAIMIQGAIVQIWGGQARRIAQPDLLTGT---- 130 Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224 + Y I+ +VL+ L A++ L + R+ + R + + +L Sbjct: 131 -------LSIGSLNYPIYRLFVLVVSTVLIAAVWLAIDRSNLGILMRASAHDTEMVDALG 183 Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284 + S F + G+AG ASR I IV++GG+ S Sbjct: 184 IDVSKVFTSVFVFGAVLAGLAGVLLGASRSV--NPGMGMGIIIEAFVIVVIGGLGSFRGA 241 Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344 A ++ V + + + + +V++++ + L Sbjct: 242 VYAGLLIGLVTAYGALIAPTLTD--------------LFLFGLMAVVLMIKPNGLFGTTE 287 Query: 345 P 345 Sbjct: 288 A 288 >gi|126724488|ref|ZP_01740331.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2150] gi|126705652|gb|EBA04742.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2150] Length = 431 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 99/270 (36%), Gaps = 21/270 (7%) Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 PV +++G I+G +L R DYLAIATL +SEI IL +T G + Sbjct: 162 AWPVGGLLAGGAAWIVGKITLGLRSDYLAIATLGISEIIVAILKHEDWMTRGVKNVNGIP 221 Query: 155 RLYFLGTTVRSLIRFFRF---------PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205 R +++ F + S V+ ++ + L + + ++ Sbjct: 222 RPVPYEVDLQNSDWFSGWAMSVGGDVTTLSSVVVKLSYAGLFLIVLVAVMYLSEKALKSP 281 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS- 264 R IRDN+ + ++ I L F + S +G+AGA +++P ++ Sbjct: 282 WGRMMRAIRDNEVSAAAMGKNITARHLQVFILGSVVVGIAGAMLTTLDGQLTPSAYQPLR 341 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIG-----------VVELCCGMNFYYFNSLLKFD 313 ++ +VI+GG + ++ ++E+ Sbjct: 342 FTFLIWVMVIVGGSGNNWGSILGGFLIWFFWIEAETLGRSLMEILTSGLDPTSGLRTHLL 401 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 S + M I L +V+ L+ + Sbjct: 402 NSADHMRLATMGIILLVVMRFSPRGLIPEK 431 Score = 41.8 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 37/90 (41%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ L +F+G +S ++ LI + + G++I G GL ++ + A+ Sbjct: 5 IVYFAIMAALLIFVGFYQSWNVSLTILNLCLISAIMSLGVNIQWGYAGLFNVGIMGFAAL 64 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 G + V++ W + + + + Sbjct: 65 GGLAAVLISVPPVPEAWAVGGMGLLTAAIM 94 >gi|330815027|ref|YP_004358732.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327367420|gb|AEA58776.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 294 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 106/318 (33%), Gaps = 26/318 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + + Y + + GL+++ G L +++ + +GA + + Sbjct: 3 IFGIPLSAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLN 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + L W ++ ++ +++G G+++ L++ + L+++ ++ G Sbjct: 63 YFSLPYWAMLVLAPLVTGLFGILIERSMLRWLYRLDHLYGLLLTFGITLVIEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 ASGQPYDVPALLSGAT----------DLGFMYLPNYRAWVVVASLTVCLATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSILTGLLLGVIEGFTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLRLRT 344 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFGKER 294 >gi|269104355|ref|ZP_06157051.1| ribose ABC transport system permease protein RbsC [Photobacterium damselae subsp. damselae CIP 102761] gi|268160995|gb|EEZ39492.1| ribose ABC transport system permease protein RbsC [Photobacterium damselae subsp. damselae CIP 102761] Length = 328 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 92/312 (29%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 30 LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 88 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L+ +A+++GA + + IATL+ + + Sbjct: 89 LCGAFAA--TLIAMEVPVLIAVPTALLAGAILGAISGVIIAKGKVQAFIATLVTMTLLRG 146 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + + G F Y + + + M + A Sbjct: 147 VTMVYTDGRPISTGFTDVA---------------DSFAWFGTGYAMGIPVPIWLMVIVFA 191 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L T + N+ A + K+ +A+ +AG + Sbjct: 192 AAWYLLNHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGFLSALAGIIITSRLSS 251 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V + GG + I+ + ++ + ++ Sbjct: 252 AQPTAGMGYELDAIAAVVLGGTSLAGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 311 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 312 AKAVVILLAVLV 323 >gi|149374921|ref|ZP_01892694.1| inner-membrane translocator [Marinobacter algicola DG893] gi|149360810|gb|EDM49261.1| inner-membrane translocator [Marinobacter algicola DG893] Length = 289 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL+IV G L +++ Y +GAY L + G+ W + + Sbjct: 8 LLNSLDIGLLLFIIAVGLNIVFGVLNIINFAHGALYMLGAYLAFTLINIAGMPFWAALIL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +I+ L+F +L+++ I+ + + G V Sbjct: 68 APIGVAILAVIIDRVLLRFIYSRDVADSLLLTFAILLIINESVRMIWGSGIHVVQPP--- 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + +V++ L A + RT + R ++ Sbjct: 125 -------DLLSGSVQLLGSSVATYSLFVIVIGLLLLAGLWYLFNRTRVGRIMRAAALDRD 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L FA + + G A R I +V++GG+ Sbjct: 178 MAEALCINTRLVVTGVFAFGAWLAAVGGVMAAP--MRALDPGMGDKIIIESFIVVVIGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S IL + + L + + LV+L + + Sbjct: 236 GSFPGALLGAIILGLIHGFGGRY--------------LPEVNLLLPFVGMALVLLFKPNG 281 Query: 339 LLR 341 ++ Sbjct: 282 MMG 284 >gi|114765329|ref|ZP_01444446.1| branched-chain amino acid ABC transporter, permease protein [Pelagibaca bermudensis HTCC2601] gi|114542309|gb|EAU45338.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. HTCC2601] Length = 429 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 95/270 (35%), Gaps = 21/270 (7%) Query: 95 LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154 PV +++ ++G +L R DYLAIATL ++EI +L +T G + Sbjct: 160 AWPVGGLLAAGVAWVIGKTALGLRSDYLAIATLGIAEIIIALLKNEDWLTRGVKNVIGLP 219 Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF---------LSASIILWLRRTA 205 R +++ F + + + + + + + + + Sbjct: 220 RPVPYEIDLQNDAGFVETAAGIGLDPTTASTIYVKLGYSVLFAVVLVVLLVLAQLALNSP 279 Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS- 264 R +RDN++A ++ + L F + SA G+AGA +++P ++ Sbjct: 280 WGRMMRAVRDNEEAAEAMGKDVTARHLQIFILGSALCGIAGAMMTTLDGQLTPSSYQPLR 339 Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR----- 319 ++ +VI+GG + ++ + M + + + Sbjct: 340 YTFLIWVMVIVGGSGNNLGAVLGGFLIWFLWVQVEPMGQWLMGVITAGMADGSALKAHLL 399 Query: 320 ------HTTLMVIALFLVILMRSHSLLRLR 343 M + L LV+ LL R Sbjct: 400 GSVQHMRLLTMGVILLLVLRFAPRGLLPER 429 Score = 37.9 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 25/68 (36%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 G +S + L+ + A G+++ G GL ++ + A+G + V+ Sbjct: 18 GVLQSWNSALIILNMGLVSAIMALGVNLQWGLAGLFNVGVMGFVALGGLAVVLTSVTPVP 77 Query: 91 SIWLLIPV 98 W Sbjct: 78 EAWAAGGW 85 >gi|55377507|ref|YP_135357.1| branched-chain amino acid ABC transporter permease [Haloarcula marismortui ATCC 43049] gi|55230232|gb|AAV45651.1| branched-chain amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 314 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 102/318 (32%), Gaps = 26/318 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL----- 94 + I M A GL++++G L +L+L +++GAY+ + + I Sbjct: 13 LNGIQFGFILFMIASGLTVILGILDVLNLAHGELFSLGAYTAIGVFGFIIGIIGPPGGGV 72 Query: 95 ---LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + A+++ L + + + + + + +++ + + Sbjct: 73 VGTAVFILAVLAAVLVTAAILLPVGTLFEAVFLRQIYDRDQVYQLVLTFALLLILLDVKK 132 Query: 152 VADRLYFLGTT--VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + T ++ + Y + +V+L + A + + RT Sbjct: 133 FIWGDSSIRTDAVYSAINAIPTSELVGLNYPTYNVFVILVGSAVVAGLFWFFERTKTGRI 192 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R +++ ++ + FA+ + G AGA + ++ Sbjct: 193 IRATAIDREMATAIGVSTDRVFTLVFALGAFLAGFAGAMAVPPTSA--TLEMGTNPLVLS 250 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329 ++++GG+ SL ++ + + + + Sbjct: 251 FVVIVIGGLGSLRGAFVGALLVGVIRSWMITLYPPGEIAAP--------------FAIMA 296 Query: 330 LVILMRSHSLLRLRTPSN 347 L++L++ L + Sbjct: 297 LILLVKPEGLFGTWGETA 314 >gi|260777266|ref|ZP_05886160.1| ribose ABC transport system permease protein RbsC [Vibrio coralliilyticus ATCC BAA-450] gi|260606932|gb|EEX33206.1| ribose ABC transport system permease protein RbsC [Vibrio coralliilyticus ATCC BAA-450] Length = 327 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + I ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + L + + + + + + + + F Sbjct: 88 LCGAFAASLIALEVPVLVAVPTALFAGAALGAISGIIIAK------------GKVQAFIA 135 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + T +F + I V++ Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWYL 195 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 T + N+ A + K+ +A+ +AG + Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLSALAGIIITSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|126734793|ref|ZP_01750539.1| Ribose ABC transporter, permease protein [Roseobacter sp. CCS2] gi|126715348|gb|EBA12213.1| Ribose ABC transporter, permease protein [Roseobacter sp. CCS2] Length = 362 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 91/313 (29%), Gaps = 11/313 (3%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + L S + + Q+ I + A S+V+ + G + L+ Sbjct: 47 LFVLVASIAVFGLLLGSKFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIA 105 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYG+ + + + G I G + I++ Sbjct: 106 VLSSVIMGQFTFRYGMPVEAAVALGLAFGTLIGSINGWLVAVMKLPPF-----IVTLGMW 160 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I++ + + I D F + Y ++ M + Sbjct: 161 QIVLAANFLYSANETIRSQDIEAEAPLLQLLGTTFKIGADADGRGGATFTYGVIAMVLIF 220 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 A + L +TA + D+ +A + +S +AV+ +AG Sbjct: 221 AVLAYVLSQTAWGRHVYAVGDDPEAAQLSGVNVRSTLISVYAVTGFICAIAGWALIGRIG 280 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP + + ++VI GG S+ I+ + Sbjct: 281 SVSPTSGQLLNIESITAVVIGGISLFGGRGSILGPLFGALIVGVFTLGLRLAGADAQWTF 340 Query: 310 LKFDCSFNMRHTT 322 L T Sbjct: 341 LLIGVLIIGAVTV 353 >gi|85705938|ref|ZP_01037034.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] gi|85669526|gb|EAQ24391.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] Length = 308 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 97/307 (31%), Gaps = 21/307 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + + + A GLS+V G + ++++ + +GA + + ++ ++ Sbjct: 15 AVTAAVLALTAVGLSLVFGVMRVVNIAHGEFFMLGAVLAWWIAQSVVGHPEIGFALALVV 74 Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + + + + R DY T++ + I+ + + G VA Sbjct: 75 APLIVGALAVAADMTILKRLDYDPERTIVATIGLLYIIQQVTLMGYGPDARPVAAPFNTR 134 Query: 160 GTTVRSLIRFFRF---PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + V+ L ++ + + RT I R + + Sbjct: 135 LAIPWFEHGPEGWAMIWPWGLGTTSYKLAVIGAAVVLLCAVWVLMTRTRIGLVMRATQAD 194 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 ++ + + F + +A +AG + + ++ +VI+G Sbjct: 195 REMALAFGIPVERVYAGVFGLGAALAALAGVLIVPIQQA--HYLMGADPLLLSFIVVIIG 252 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL A ++ + L + + LV++ R Sbjct: 253 GLGSLPGTVVAAILIGLSDGIISVFFSPTLAK-------------ILATLLVGLVLVFRP 299 Query: 337 HSLLRLR 343 L R Sbjct: 300 QGLFGTR 306 >gi|213971398|ref|ZP_03399512.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|213923841|gb|EEB57422.1| high-affinity branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 304 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 81/289 (28%), Gaps = 3/289 (1%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + Y + A G ++V G +G+++ Y IG+Y + + + +P+ Sbjct: 11 LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + A +++ + + LI ++ + Sbjct: 71 LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIP--LISAIGMSIFLQNSVQLSQGSG 128 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L F + Y ++ ++ + S R ++ K Sbjct: 129 NFAIPNLLPGSLSFGPGGSQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRACAEDMK 188 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L F V +A +A + I+ F + + +LGG+ Sbjct: 189 MANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAFTAAVLGGI 247 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 S+ +L + + ++ F + I Sbjct: 248 GSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 296 >gi|154245521|ref|YP_001416479.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154159606|gb|ABS66822.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 408 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 111/315 (35%), Gaps = 34/315 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-- 89 + + IQ+LI +FA S++ G G+LS + IGA++ + + + Sbjct: 19 PAFLSAGLVNASIQMLIAALFASAFSLLCGQAGMLSFGHSAYFGIGAFATIHAMNAFNGA 78 Query: 90 --LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 L LL V ++ G+ G + K G Y ++ TL ++E+ + K + G+ Sbjct: 79 GLLPTPLLPLVGGLLGLVSGIAAGWFATKRTGVYFSMITLALAELLHALAPHLKEVFGGE 138 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 AG+ + T + +YY+ L L ++ T + Sbjct: 139 AGVSAMRMPAWGFTF---------------GSNVEVYYLTLAWVLLCLLLLYLYTLTPVG 183 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 +R+N L + + FAVS+ F G+AG A + + + + + Sbjct: 184 RLTLGLRENTHRLRFLGYNVHRLSVLVFAVSAMFSGVAGGLQALNIEAANYVVLDMQLSA 243 Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 V+ +GG+ A A++ + + + Sbjct: 244 SVVLNSYIGGVKVFLGPAIGAALMSFFGYAVSDLTRSW---------------LLYQGVL 288 Query: 328 LFLVILMRSHSLLRL 342 LV++ L+ Sbjct: 289 FVLVMMFLPDGLVGE 303 >gi|99081117|ref|YP_613271.1| inner-membrane translocator [Ruegeria sp. TM1040] gi|99037397|gb|ABF64009.1| inner-membrane translocator [Ruegeria sp. TM1040] Length = 441 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 117/345 (33%), Gaps = 22/345 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ L+L A Y + + A + V L +I Sbjct: 98 ILLALVLGAATIAAAIYSYRVMAAGKARTLTLLAILIVGFVVYRAALDPGVEAIESINPA 157 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +GL + L P+ +++ ++G +L R DYLAIATL ++EI +L Sbjct: 158 LEG-NIGGFGLPVLLAWPLGGLLAAGVAWMIGKTALGLRSDYLAIATLGIAEIIIAVLKN 216 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF---------VIYEIFMYYVLLGM 190 ++ G + R +++ F +++ + ++ + + Sbjct: 217 EDWLSRGVKNVVGLPRPLPYEVDLQADPAFVNQAAAWGMDATTASTLYVKLGYALMFTVV 276 Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250 + + ++ R IRDN+ A ++ + L F + SA G+AGA Sbjct: 277 LLVFLWMAQMALKSPWGRMMRAIRDNEVAANAMGKHVTRRHLQVFILGSAICGVAGAMMT 336 Query: 251 ASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIG-----------VVELC 298 +++P + ++ +VI+GG + ++ ++EL Sbjct: 337 TLDSQLTPGTYNPLRFTFLIWVMVIVGGSGNNFGAVLGGLLVWFLWIKVEPMGVMLIELV 396 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 S + M + L LV+ L+ + Sbjct: 397 TSGMSEDSGLRAHLLESASHMRLFTMGLVLLLVLRFSPRGLIPEK 441 Score = 39.1 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 32/89 (35%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +V F + S ++ LI + A G+++ G GL ++ + Sbjct: 13 FVGLLLVLEGTTNAFGVFSGSWNSALTILNMGLISAIMAIGVNLQWGFAGLFNVGIMGFT 72 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMIS 103 A+G + V+ W +++ Sbjct: 73 ALGGLAVVLTSMPPTPGAWQAGGWQILLA 101 >gi|237736164|ref|ZP_04566645.1| ribose ABC transporter permease [Fusobacterium mortiferum ATCC 9817] gi|229421717|gb|EEO36764.1| ribose ABC transporter permease [Fusobacterium mortiferum ATCC 9817] Length = 315 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 88/312 (28%), Gaps = 25/312 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + +++ +++ + + I ++ Q I + A G+++V+ G + L+ A Sbjct: 18 LIGLIIFAVIVSVLNPRFLTHANILNVLRQTSINSIIAIGMTLVI-LTGGIDLSVGSILA 76 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 G + L V+ + G G K + + Sbjct: 77 FCGAVMA-SLLNAGHNPILAFIVTLALGLVFGFFNGFLVSKMKLQAFIVT---------- 125 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L+ + + + + I +Y ++ Sbjct: 126 -LVTMTFLRGATLVFTEGKPITVDDGGLLFENIGGGYLFD---IPIPIYIMIALFVAGHY 181 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 ++ T I N++A + K+ + + +AG + Sbjct: 182 LLM----HTKFGRYTYAIGGNEEATKLSGINVDKVKMWVYGLCGMLSALAGVILTSRLYS 237 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V + GG+ ++ A I+ + +N + ++ Sbjct: 238 AQPTAGSGYELDAIAAVVLGGTSLAGGVGRVTGTALGALIIGVLGNALNLLNVSSYYQMM 297 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 298 IKAIVILIAVLI 309 >gi|328952053|ref|YP_004369387.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] gi|328452377|gb|AEB08206.1| ABC-type transporter, integral membrane subunit [Desulfobacca acetoxidans DSM 11109] Length = 302 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 91/306 (29%), Gaps = 15/306 (4%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ + +Y + A G S+V G L +++ + +GAY + Sbjct: 6 QYLLNALQLGSVYALIALGYSMVYGILTMINFAHGDIFMVGAYLAMWAACFLLGLNLTFP 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + + + L + LA L + ++ + Sbjct: 66 AMFVFLGALLFSMTLTAVLGVAIERLAYRPLRQAPRVSAVITALGVGLFLENFTLATIGP 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + ++I + + + + +++ L + +R T A R I + Sbjct: 126 E--PRQIPAIIPVQQLSWAGISFTNIQILIIIVAIGLMLLLDWVVRHTMTGMAMRAISYD 183 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + + + FA+ SA G G + + + P M ++G Sbjct: 184 CQVAPLMGVPVNRVISLTFAIGSAIAGAGGLLYGLAYPVLDPYM-GIRIGWWAFISAVVG 242 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ ++ +L V + + + L ++++ + Sbjct: 243 GIGNIRGAMLGGFLLGAVEIFT------------PVLLASSTYRDCVAFSMLLILLVFKP 290 Query: 337 HSLLRL 342 +L Sbjct: 291 TGILGR 296 >gi|304394345|ref|ZP_07376268.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130] gi|303293785|gb|EFL88162.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130] Length = 354 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 98/322 (30%), Gaps = 20/322 (6%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGA--TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 L+ Y ++ L+ +V L++F L S + + Q+ I + ++++ + G Sbjct: 37 LHSYPALVPLIVLVASLVVFGLLLGSKFFSPFALTLILQQVAIVGIVGAAQTLIILTAG- 95 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + L+ + + RYGL L + + CG I G+ R + Sbjct: 96 IDLSVGAIMVLSSVVMGQFTFRYGLPPELAVICGLAVGAFCGFINGVLVAIVRLPPFIVT 155 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + I + T I A + F I Y Sbjct: 156 LGMWQIILATNFLYSSNETIRSQDIAAAAPILQF------------FGEKIRIGGAVFTY 203 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 ++G L A + L TA I D+ +A + +S + + A Sbjct: 204 GVIGFVVLVAVLAYVLANTAWGRHVYAIGDDPEAAELSGIRVKRTLISVYVTAGLICAFA 263 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300 G +SP +F+ + ++VI GG S+ + I+ Sbjct: 264 GWALIGRIGSVSPTAGQFANIESITAVVIGGISLFGGRGSILGMLFGALIVGVFSLGLRL 323 Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322 + + L Sbjct: 324 IGTDPQWTYLLIGLLIISAVAV 345 >gi|86136424|ref|ZP_01055003.1| possible permease of ABC transporter [Roseobacter sp. MED193] gi|85827298|gb|EAQ47494.1| possible permease of ABC transporter [Roseobacter sp. MED193] Length = 352 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 102/283 (36%), Gaps = 6/283 (2%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L+A V L ++L Y ++ I IY M L ++ G G+L + + Sbjct: 15 LMATVIVTGLLVWLMPMLISTYTLTVLI---IYGMLGLSLGLIWGFGGILCFGQAAFFGL 71 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAYSY I +G S +I + + ++ L D ++ + Sbjct: 72 GAYSYAIAAINFGESTLPMILAVLVPAVVAALLGALMFYGRLTDVYLGVITLVVTLILFK 131 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 + G + RL I+ +YV + L Sbjct: 132 FVNSTA---GPQYVIGKARLGGFNGIPGFQTLNVPGRPEAYIWGDAYFYVCAVLLALVFV 188 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ L R++ IR+N+ + + K FA+ +A G+AGA FA + + Sbjct: 189 LVTVLLRSSFGRVAVGIRENETRMSLMGYDVRARKTILFAIGAAIAGLAGALFANWGEIV 248 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +P +F ++ +I I+GG+ + A L + L Sbjct: 249 TPSLFSLGQSAEIIIWCIVGGLGTRLGPILGAAGLAYLKFLLG 291 >gi|91779098|ref|YP_554306.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691758|gb|ABE34956.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia xenovorans LB400] Length = 289 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 96/312 (30%), Gaps = 26/312 (8%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + I S + +Y + A G++I+ + +++ + +GA++ ++ +G S Sbjct: 3 SQLIVSGVVAGSLYALIALGMTILYRATTVVNFCHGEFFMLGAFAAMVAQRSFGFSYAGS 62 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + S ++ A G+ + ++ I+ +M+ ++ G+ + Sbjct: 63 VVFSCVLLFAIGLAVERALMRPLQRAPHISLAMMTVALSYLMKGVVRFFYGREVDPLPPM 122 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + S+ + + A ++ + T + Sbjct: 123 IGGDQISFGSISVMPDD-----------LLTMGFTLVVVAGFFVFFKATQAGKVIQAASQ 171 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + + + + + + AG A + + + + + L Sbjct: 172 TPRGASLVGINVPMLRNLMWGTGALLGAAAGILIAP--TTLVYPDMGATMLMHAFAAMTL 229 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG SL + +L V + G + + + V+++R Sbjct: 230 GGFGSLPGAVLGSIVLGVVENVMGGFVSSSLIDVTD-------------YLVIIAVLIVR 276 Query: 336 SHSLLRLRTPSN 347 LL S Sbjct: 277 PQGLLGESRISR 288 >gi|91975620|ref|YP_568279.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gi|91682076|gb|ABE38378.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 328 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 62/333 (18%), Positives = 122/333 (36%), Gaps = 23/333 (6%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 ++ LL Y + L+YV A +IV G G +SL + GA Sbjct: 14 WLWGALLLTAALPLTLNSYYLHILTIALVYVALASAWNIVGGMAGQISLAHSLFIGTGAM 73 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 L + G+++W + +SA I+G G I+ +F+ +L+ + ++ ++ Sbjct: 74 LSTALLVKLGINMWAGLVISAAIAGLLGAIIAWIDFRFQLGHLSFVLITLAFAEMAAIVV 133 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 G A + R + ++V+LG+ A I + Sbjct: 134 EGWEFLGGASGLLLPRDTGDVWAFQ------------FGGVRGAFWVMLGLAATIALINV 181 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + + RTIRDN+KA ++ ++ K+ A +S+ + G + P Sbjct: 182 AILNSPLGYYLRTIRDNEKAAQAIGVDVLRHKMIAMTISAVLTSIVGTCYVRYLTFADPY 241 Query: 260 -MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 + I ++ +GG+ A +L+ + E+ G + + Sbjct: 242 LLASPLITIEIVLFATVGGLGRAFGPALGALLLVPLGEVLRG----------QLGGAVPG 291 Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351 H + + + +VIL+ LL L R Sbjct: 292 LHYFIYGVVVIVVILVTPRGLLPLFEKLVRRRR 324 >gi|269127071|ref|YP_003300441.1| inner-membrane translocator [Thermomonospora curvata DSM 43183] gi|268312029|gb|ACY98403.1| inner-membrane translocator [Thermomonospora curvata DSM 43183] Length = 320 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 101/320 (31%), Gaps = 29/320 (9%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL------- 90 IY + A G ++V G L L++ + IG + +++ + Sbjct: 8 NTVDGLSLGAIYALVALGYTMVYGVLRLINFAHSEIFLIGTCASLVVVNAVAPSAPLSGV 67 Query: 91 ----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + L+ V+ + SGA M + + + + A + L + Sbjct: 68 ALLGIVLLMAAVAMVASGAGAMALEFVAYRPLRKHGASRLAALISAIGASLFLQQFFALF 127 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM----YYVLLGMCFLSASIILWLR 202 V+ F F I + + V + + + ++ Sbjct: 128 VIPWLFDKPKEGGRLPVQPEQHFVDRHDVFSIGGVGVANDKLIVFIAAILMMVVLDQFVN 187 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 RT + R+ + + + I + FA+ A G+A A + + + M Sbjct: 188 RTKLGRGIRSTAQDPETAVLMGVNIDRIVTATFAIGGAMAGVAAALYVLRFEE-TFFMVG 246 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 F I + +LGG+ ++ +L + + + ++ F Sbjct: 247 FLLGIKAFTAAVLGGIGNIRGALTGGFVLGLLEMYGSMVFGSAWKDVVAF---------- 296 Query: 323 LMVIALFLVILMRSHSLLRL 342 + L LV++ R +L Sbjct: 297 ---VILILVLMFRPTGILGE 313 >gi|209551903|ref|YP_002283820.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537659|gb|ACI57594.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 340 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 94/323 (29%), Gaps = 23/323 (7%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 +R++ + + + ++ + + + +QI I + A G++ V+ G Sbjct: 21 IRISMKEAGVAIALILILAFFSATAPYFATPENFLKIFVQIAINTVLAAGMTFVILVGG- 79 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 + L+ A+ + S W I ++ + S G +G Sbjct: 80 IDLSVGSLLALCTVIGATIMINPAFSPWQAIVLACLASMGTGAALGAV----------NG 129 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 + + ++ + V + + + F + IF+ Sbjct: 130 WICEKWKLPSFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWGIFPSIFLIA 189 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 +++ + R T I N++A K++ F +S G+A Sbjct: 190 IVVVLIGWFVL-----RYTVFGRFVFAIGTNEEAVRLSGHQPKRYKIAVFTISGLTAGIA 244 Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299 + + + + + I+ VI+GG S+ IL + Sbjct: 245 AMVYLLRLN-VGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIIGTLVGACILQVLSTGLQ 303 Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322 + + + Sbjct: 304 LLGADDNIKPIVIGAVIVLAVIL 326 >gi|13488196|ref|NP_085619.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14027868|dbj|BAB54460.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 336 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 98/311 (31%), Gaps = 32/311 (10%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--GSRYGLSIWLLI 96 + + Y+ FA GL++V G + +++ + IGAY+ + + Sbjct: 53 VLNCLSLTSFYLCFALGLALVFGVMRIINFAHGEFFMIGAYATYLCVATLAPQIGGPSAW 112 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE---IFQNILIKWKPITNGKAGIYVA 153 V A+++ ++G + LA L + +L G G+ ++ Sbjct: 113 LVGAIVAAGITGLLGAVLYRTVVVPLADKPLAIFIATLALSYVLQTIVVQIFGPVGLSIS 172 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 L + I V++ LS + ++L RT R + Sbjct: 173 PPLRGV------------VSVGGAILPASRAMVIVAAAALSIGLWIYLMRTESGRRIRAV 220 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 N + + S G+ GA +ISP M + I+ Sbjct: 221 AQNPRGALLQGIKTRNVGNLTLIIGSGIAGICGAAMGP-ISQISPYMGGPALW-KAFIII 278 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 I+GG+ ++ A AI + L F +L + V+ Sbjct: 279 IVGGIGNVWGAVAAAAIFGVLDTLMSQFGGGRFLALTS-------------AAIMLFVLS 325 Query: 334 MRSHSLLRLRT 344 ++ L + Sbjct: 326 VKPSGLFGEKE 336 >gi|294101169|ref|YP_003553027.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261] gi|293616149|gb|ADE56303.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261] Length = 289 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 24/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G S+V L + IG Y G++IWL + Sbjct: 4 VINGLSLGSVYALIAVGYSLVYSVLLFSNFAHGGFLVIGGYICYGALKSMGVNIWLAGML 63 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S +G + + K + + ++ ++ G + A Sbjct: 64 SLAGAGIAAALTERIAYKPIRERTNVTLYLLIASMGMSIVIENIFVIVAGGRFRALPPVI 123 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V+ F L + L+L RT A R + + Sbjct: 124 PTYPVQ--------LFGLATTSAFDLLSFLIALIALGCLQLFLSRTKWGLAIRAAACDLR 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + A + G F + + + I ++GG+ Sbjct: 176 TAGLMGVNVNLLISIVFFTAGALAAIGGIFLSVRY---TLYPQLGAITIKAFVAAVIGGL 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL + IL L G + ++ L + +L++ Sbjct: 233 GSLPGAVVGSLILGLAEMLAAGFIS-------------SQMRDLVVFSLLVITLLIKPSG 279 Query: 339 LLR 341 L Sbjct: 280 LFG 282 >gi|172063977|ref|YP_001811628.1| monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6] gi|171996494|gb|ACB67412.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6] Length = 347 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 97/326 (29%), Gaps = 18/326 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + F + + V+ + S+ + + A + V+ Sbjct: 25 ARFFNPAARQKLLAFASLVLLIAFFSFASPNFLDVDNLVSILQATAVNGVLAVACTYVII 84 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + G + L+ A ++ +++G+ + L I + G + G K + Sbjct: 85 TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALSFGALSGSVSGFVIAKMKVPP 143 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + G + + R + T +I + Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGSLIPAL 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +L + ++ + L RT + N++A + K++ + S A Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296 G+AG A+ + P + + E + ++VI GG S+ I+ + Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322 M+ + + Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337 >gi|126740266|ref|ZP_01755955.1| inner-membrane translocator [Roseobacter sp. SK209-2-6] gi|126718721|gb|EBA15434.1| inner-membrane translocator [Roseobacter sp. SK209-2-6] Length = 345 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 98/283 (34%), Gaps = 6/283 (2%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 + ++ + ++ Y ++ I +Y M L ++ G G+L + + Sbjct: 9 AITIILVTAILTWVMPLIISTYTLTVLI---VYGMLGLSLGLIWGFGGILCFGQAAFFGL 65 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 GAY+Y I G S +I + + ++ + D ++ + Sbjct: 66 GAYTYAIAAINIGESTVPMILAVLVPAVFAALLGAMMFYGRLTDVYLGVITLVVTLILFK 125 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 I G + RL I+ +YV + L Sbjct: 126 FINSTA---GPQYVIGDARLGGFNGIPGFQTLNIPGRPDDYIWGDSYFYVCAILLALVFF 182 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 ++ L R++ IR+N+ + + K FA +A G+AGA FA + + Sbjct: 183 LVSALLRSSFGRVAVGIRENETRISLMGYDVRARKTVLFAAGAAIAGLAGALFANWSEIV 242 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299 +P +F ++ +I I+GG+ + A L + L Sbjct: 243 TPSLFSLGQSAEIIIWCIVGGLGTRFGPVLGAAGLAYLKFLLG 285 >gi|220903751|ref|YP_002479063.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868050|gb|ACL48385.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 301 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 93/307 (30%), Gaps = 16/307 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++V G L L++ + IGAY + L LS L V Sbjct: 8 LLNGLAVGGIYALVALGYTMVYGVLKLINFAHGDLFTIGAYLGLTLLVSCNLSGMLNPVV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + ++ + + ++ + + Sbjct: 68 AVLAVFVMVALLVAIIGFLLERTAYRPLRNAGRL--SAVVSALGASIFFQNAVMLIYGAR 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L F + V+ L + +++R+ A R + + Sbjct: 126 FYVYPDYLRPDFTVHLFGLAVPGVRLLVIAASVILMLGLWAFIQRSRTGAAIRAVAIDPG 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + F + G AG +I M +S + + ILGG+ Sbjct: 186 AAQLMGINVDRIIGLVFLIGPGLGGAAGLMVGIYYGQIDFTM-GWSYGLKAFTAAILGGI 244 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ +L + L G + + F L L++++R Sbjct: 245 GNIPGAMIGGLLLGVIEALAAGYIAIAWKDAIAF-------------FVLILILIIRPTG 291 Query: 339 LLRLRTP 345 +L RT Sbjct: 292 ILGERTA 298 >gi|326797199|ref|YP_004315019.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326547963|gb|ADZ93183.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 361 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 77/313 (24%), Gaps = 18/313 (5%) Query: 12 DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71 L +L + + + + Q+ I + ++++ + G + L+ Sbjct: 50 AAPLIVLLLAIFGFSLIVGDRFLHPFNLSLVLQQVTIIGVIGIAQTLIILTAG-IDLSVG 108 Query: 72 IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 + + + YG+ L + + G I G + + + Sbjct: 109 AIMVLSSVVMGRMAIDYGIDPSLALLIGIATGAITGFINGTLITRLKLPPFIATLGSWNV 168 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 F L Y + + + ++ + Y + M Sbjct: 169 FFALNL------------WYSKSQTIRSQEIAANAPLLQWLGETINVFGARLTYGSILML 216 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 L I L TA D+ A LS + ++ + Sbjct: 217 LLFVVIWYALNWTAWGRHVYATGDDPAAAKLAGIRTDRVLLSVYILAGVICAIGAWVLIG 276 Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306 +SP + + ++VI GG S+ I+ Sbjct: 277 RIGSVSPQAGYTTNLDSITAVVIGGCSLFGGRGSIFGTLVGALIVGVFRNGLALAGVDVL 336 Query: 307 NSLLKFDCSFNMR 319 + Sbjct: 337 WQEFTVGILIIVA 349 >gi|220920117|ref|YP_002495418.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219944723|gb|ACL55115.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 291 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 89/305 (29%), Gaps = 20/305 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + +Y + A G +++ G G+L+L+ A S GL + V Sbjct: 7 LIDGFAISALYALGATGFTLIFGVSGVLNLSHGALMVTAAVVAWAASSELGLGSYAGAAV 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +K + + + I I + G L+ Sbjct: 67 GVAVCTLLTLATYGIVVKP-----IDRSKAIPAEEKEIFILTGTLLWGIMIQEFIAYLFT 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 I + V + + A + L + RT N + Sbjct: 122 SNAKTVMPIVEGVVTIAGVRTPWNQIFTAVVCWGTIALLWLLVNRTRTGKVVLAASMNPR 181 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + ++ + + G+AG S + + SIV+LGG+ Sbjct: 182 GVTLLGFELSKIYVAIWLIYGVLAGIAGVLLGQFLGVSSYSVGPLT--ASAFSIVVLGGL 239 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+S A ++ + + + T ++ L V+ +R Sbjct: 240 GSVSGSLIAAYVVGYLETITAYLIS-------------PAYRTIPALLLLVAVMYVRPQG 286 Query: 339 LLRLR 343 LL R Sbjct: 287 LLGRR 291 >gi|298293188|ref|YP_003695127.1| inner-membrane translocator [Starkeya novella DSM 506] gi|296929699|gb|ADH90508.1| inner-membrane translocator [Starkeya novella DSM 506] Length = 354 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 112/319 (35%), Gaps = 3/319 (0%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 +L+ L S Y + ++ A GLS++ G G LS + + Y Sbjct: 27 FLVVLIGACLYPQFSDGYTVGNTVYFFTWIFMALGLSLIWGYGGSLSFGQTAFFGLAGYG 86 Query: 81 YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILIK 139 Y IL +G + + + + L ++ L ++ +L + Sbjct: 87 YGILTINFGAAYGFTLVALVLAVAFAALFAALLGYFLFFGRISGVFLGIVTLSITLVLER 146 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--IFMYYVLLGMCFLSASI 197 + T G + RL +P ++ I +YYV+LG+ + Sbjct: 147 FMAQTAGPEWRIGSARLNGFNGMSGMPPLTIPWPGGDIVLFPDIGLYYVVLGLLVVVYLG 206 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L ++ N IR+N + L I +L F + +A G++G + + I+ Sbjct: 207 LRILVNSSFGNILVAIRENPERAEMLGYDIRKYQLGTFVIGAALAGLSGVLYTSWGQYIT 266 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 P + + I V +GG + ++ T ++ V ++ Y ++ Sbjct: 267 PSSMGMTAAALPIVWVAVGGRSDITTTLVGTLTVLAVFQMLTIYGSQYALVVMGALLVLT 326 Query: 318 MRHTTLMVIALFLVILMRS 336 + ++ +L R Sbjct: 327 VLLAPRGLVFALARLLSRP 345 >gi|110637662|ref|YP_677869.1| branched-chain amino acid ABC transporter permease [Cytophaga hutchinsonii ATCC 33406] gi|110280343|gb|ABG58529.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Cytophaga hutchinsonii ATCC 33406] Length = 363 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 103/341 (30%), Gaps = 16/341 (4%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 N +L V+ +++ + S+ + + + A G+ ++ G G+LS Sbjct: 5 FNSNSLFYIILIGVFLIIMPIGNMLGFVSNNTISLWGRYFCFAIAALGVDLIWGYSGVLS 64 Query: 68 LNCVIAYAIGAYSYVILGS--------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119 + + + +G Y+ + + V + + S Sbjct: 65 MCQAVFFCLGGYAIAMHMLLVAGGEDPSGIPDFMVWNQVDVLPAFWIPFHSFGLSFLLAL 124 Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFR 171 I I IK + + +A L FL + Sbjct: 125 LIPGIFAFIFGYFVFRSRIKGVYLAIITQALALAMWLIFLRNETMLGGTNGLTGFKTLLG 184 Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231 F S ++ +Y V + F WL + IRD++ ++ K Sbjct: 185 FSLSSPSTKLGLYIVSFLVMFGLFLFCKWLVNSKFGKVLVAIRDSESRVSYTAYNVVNYK 244 Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291 L+ F +++ + G + I+P ++ ++ V LGG L ++ Sbjct: 245 LAVFVIAAVVAAIGGMLYVPQTGIITPGRMDVKASVEMVMWVALGGRGRLKGAIIGALLV 304 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 + +C M + +L + L ++ Sbjct: 305 NYLYSVCTSMFPESWLYILGVLFILTVLFFEKGFWGLIEML 345 >gi|238025739|ref|YP_002909970.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia glumae BGR1] gi|237874933|gb|ACR27266.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 294 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 105/318 (33%), Gaps = 26/318 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + + Y + + GL+++ G L +++ + +GA + Sbjct: 3 IFGIPLSAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLH 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 + L W ++ V+ ++ G+ G+++ L++ + L+++ ++ G Sbjct: 63 YFSLPYWAMLVVAPLVVGSFGILIERTMLRWLYRLDHLYGLLLTFGITLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 ASGQPYDVPALLAGAT----------DLGFMYLPNYRAWVVVASLAVCLATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R DN K + + + A AG A + Sbjct: 173 GAYLRAGTDNPKLVEAFGVNVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLRLRT 344 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFGKER 294 >gi|148252244|ref|YP_001236829.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146404417|gb|ABQ32923.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 308 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 91/301 (30%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +YV+ A GL+I+ G +G++++ +GAY + + + + L P + Sbjct: 22 LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNAFQSFLPALFPGYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + A I + + +L W + +G Sbjct: 82 AMALAFIASGSLGMLVEWA--MIRRLYKRPLDTLLATWGLSLILQQAYRSVFGAREVGVE 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + + I +V+ ++ + L + R + N+ + Sbjct: 140 LPEWMMGSWQATDAIQIPINGMFVMCLTILITIVVAYVLFLSRWGRQVRAVVQNRVMAGA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + F + G+AG+ F + + +V+ GG SL Sbjct: 200 VGINTEKVDRYTFGLGCGIAGVAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAASLL 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++A+ +++MR L L Sbjct: 258 GTIASAFTISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMMRPQGLFAL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|323142364|ref|ZP_08077196.1| ribose ABC transporter permease protein [Phascolarctobacterium sp. YIT 12067] gi|322413248|gb|EFY04135.1| ribose ABC transporter permease protein [Phascolarctobacterium sp. YIT 12067] Length = 309 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 94/312 (30%), Gaps = 25/312 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + +V +++ + + ++ Q+ I + ++G++ V+ G + L+ A Sbjct: 13 IIGLIVLFVVISCLNSSFIDPSNLKNLLRQVSINALISFGMTFVI-LTGGIDLSVGSILA 71 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + ++ ++ + + Y +A I + Sbjct: 72 LSSALMGSFIKGGMDPVFGIVLACLIGAALGS------VNGLVITYGKVAPFIATLATMT 125 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 I + G + SL RF Y + + M + Sbjct: 126 IFRGLTLVY-------------TNGNPISSLSEDDRFLEFGQGYVAGLPVPAIMMLIMFF 172 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L +T + + N+K F I K+ A+ V+ GMAGA + + Sbjct: 173 ILWFILHKTPLGRKTYAVGGNEKVSFIAGIKINRIKIFAYTVTGFLCGMAGAILTSRLNS 232 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V + GG + I+ + +N F + Sbjct: 233 AQPTAGTGYELDAIAAVVLGGTSLSGGKGRIFGTIIGALIIGTLNNGLNILNVSSFYQQV 292 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 293 VKGIVILLAVLM 304 >gi|150377452|ref|YP_001314047.1| inner-membrane translocator [Sinorhizobium medicae WSM419] gi|150031999|gb|ABR64114.1| inner-membrane translocator [Sinorhizobium medicae WSM419] Length = 296 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 89/305 (29%), Gaps = 22/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +++ + Y + A GL I+ G L L++ + Y+ + I + + Sbjct: 6 QFVIDVLSLGGAYALMALGLVIIYGILRLVNFAYGELIMVAGYTMFLASGSGLPWIVMAV 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++ G++ + + A LI S F N+L + V Sbjct: 66 L-AVGMAIVFGILTDYVAFRPVRAKSVTAVLITSFAFSNLLQNAALLFISPRPRNVPLP- 123 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 I I + + L A + +RRT + A R N Sbjct: 124 ---------DIFSQTVSIGGAITPVRNLITIAASILLLAGVAFLMRRTTLGIAMRAAATN 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 L SAFA+S G+ G + + ++ ++G Sbjct: 175 FTMARMLGVPANLIISSAFALSGFLAGVVGILWIGRIGTV-VPGVGLEPLLVAFIATVIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL +L + + L++L R Sbjct: 234 GMRSLPGAVVGGFLLALIDTTLNY----------TLSQDLLKFRDAFTFSLVILILLWRP 283 Query: 337 HSLLR 341 L+R Sbjct: 284 EGLIR 288 >gi|295678151|ref|YP_003606675.1| inner-membrane translocator [Burkholderia sp. CCGE1002] gi|295437994|gb|ADG17164.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 294 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 105/316 (33%), Gaps = 26/316 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W+++ ++ +I G G+ + L++ + L+++ ++ G Sbjct: 63 YFGLPYWVMLVLAPLIVGLVGVAIERSMLRWLYKLDHLYGLLLTFGITLVIEGVFHSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + +T + Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMYLPNYRAWVVVASLIVCFVTWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L V L + T++ + Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVVEGLTRVY--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLRL 342 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFGR 292 >gi|227822612|ref|YP_002826584.1| branched-chain amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] gi|227341613|gb|ACP25831.1| branched-chain amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 328 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 70/342 (20%), Positives = 142/342 (41%), Gaps = 22/342 (6%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M + K + L + + L ++ Y + + + + G+ I Sbjct: 1 MRHAPIATLKIASAVVFLLALLVAVPLLINATGRTDLYYT--LTSVALLSIISAGVWITF 58 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 +G +++ +G Y IL YG+S WL +P++ + A +++GLP L+ RG Sbjct: 59 -YIGRINIGQGAYALMGGYVSAILVMNYGMSFWLTLPLAGLFCAAASVLIGLPILRLRGV 117 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 Y A+ +L+++E+ + + + ITNG +GI L +LI F ++ Sbjct: 118 YFAMVSLVLTEVARLLALALP-ITNGASGIVSIPLPSRLSLFGLTLIPDF---ATLANPR 173 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y + + L + L + I ++++ N++ S+ I + ++ A+A+SS Sbjct: 174 LSFYIASVLLMALCFLGLYRLAHSRIGQLCQSLQQNEELASSIGVNIAYLRVVAYALSSF 233 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+ GA FA+ I P F ++++ + LGG+ + T +L +L Sbjct: 234 LGGVGGAMFASISQSIYPSSFTVADSVNFMLNCFLGGLGYVLGPMLGTFVLYFGWDLL-- 291 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + AL +++L+ + LL L Sbjct: 292 -------------FQTGEFQLLIFSTALIVLMLVLPNGLLSL 320 >gi|163843881|ref|YP_001628285.1| hypothetical protein BSUIS_A1690 [Brucella suis ATCC 23445] gi|163674604|gb|ABY38715.1| Hypothetical protein BSUIS_A1690 [Brucella suis ATCC 23445] Length = 334 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ +L + I ++ +Q I + A G++ V+ + L+ Sbjct: 27 IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ + ++ P S I+ G+++G+ G ++ + Sbjct: 86 ALAGIVSASFATTSAMAGIAGAPYSPFIAICVGLLVGIGCGALVGTIVSRFAVSAFVATL 145 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +L + +T G L + + + + ++ + + Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L R+ + N A + I + S + +S G+AG +A Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253 Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 S + I+ V++ GG+ ++ I+ + M + Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGIGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312 Query: 309 LLKFDCSFNMRHTT 322 + Sbjct: 313 QVLKGALIVGAVML 326 >gi|148257254|ref|YP_001241839.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409427|gb|ABQ37933.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 290 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 96/305 (31%), Gaps = 26/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + IY + A GL+++ G L +++ + + ++ +RYGL +L I V Sbjct: 11 LLNGLMLGAIYALIALGLTLIYGVLHIVNFAHGALLTVAMFMVWLVCARYGLDPYLAILV 70 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A + A G + + L+++ I+ Sbjct: 71 VAPLMFALGYGLQRFIIGPASHGKDNGILLVTLGLSIIIENALL-----------AAFQS 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ + F ++ + + L L +T I A R + + Sbjct: 120 DTRTITTDYSFRVVELGPLLLSFPRVVGFGVTIATTILLWLVLHQTDIGKAIRAVAKEKL 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + ++ FA+ A + +A S + ++ +IV+LGGM Sbjct: 180 GASLVGISVPHVYAMTFAIGCACLAVAAGLLMPSFYV--SPKTGAAFVLVAFTIVVLGGM 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ V + + + + +L+R Sbjct: 238 GSIPGALIGGLLIGVVEAASSLFLGDSLGQIG-------------IFLIFIVTLLVRPTG 284 Query: 339 LLRLR 343 L R Sbjct: 285 LFGAR 289 >gi|260462645|ref|ZP_05810851.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] gi|259031551|gb|EEW32821.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075] Length = 293 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 97/303 (32%), Gaps = 22/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y + A GL+IV +GL++ + Y+ + +GL + + V Sbjct: 6 IINAVSLGGVYALLALGLAIVFSIVGLINFAHGELMTLSGYAL-LASLVFGLPFPVAVLV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + M + + + L+ S ++L VA Sbjct: 65 AVSCGALAAVAMERVAFRPMRGASVTSLLLTSFAVSSLLKVVFQNGISARPQAVAMP--- 121 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 F + ++ ++ ++LRR+ A R ++ Sbjct: 122 -------GWMTGAFSFGDFTIGVGPSISIVVSALALVALEVFLRRSVTGTAMRAAAEDFD 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + +AF +S G+A + A R + P M F+ + ++GG+ Sbjct: 175 VVRLMGIPASRIIATAFLLSGLLAGLAAMLWVAQRASVDPLM-GFTPVLKAFIAAVVGGL 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL +L + L + +++ + V+L+R Sbjct: 234 GSLPGAVAGGFLLGIIEVLLQA----------TLPGAIAPYRDAIVLSGVIAVLLLRPQG 283 Query: 339 LLR 341 L+ Sbjct: 284 LIP 286 >gi|26991522|ref|NP_746947.1| branched-chain amino acid ABC transporter, permease protein, putative [Pseudomonas putida KT2440] gi|24986605|gb|AAN70411.1|AE016683_2 branched-chain amino acid ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 346 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ +GAYS ++ I +I+ + Sbjct: 73 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRFAPGAIEFYPLIALPVAFAVSAGVGMA 132 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L W I + + + + + + Sbjct: 133 LER--TVIRHLYGRPLETLLATWGISLILIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 190 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + L L RT + R + N+ + + AF + Sbjct: 191 VLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 250 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+ G A S+ S I +V+LGG+ L+ A L +L Sbjct: 251 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 308 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 +L R L L+ Sbjct: 309 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 343 >gi|84502432|ref|ZP_01000568.1| inner-membrane translocator [Oceanicola batsensis HTCC2597] gi|84389244|gb|EAQ02041.1| inner-membrane translocator [Oceanicola batsensis HTCC2597] Length = 316 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 59/320 (18%), Positives = 127/320 (39%), Gaps = 18/320 (5%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 A++ ++L + + ++ + +V+FA ++++G GLL + + A Sbjct: 6 AILLIVVLVILAPFFVYPVLLMTILV----FVLFASSFNLLLGYAGLLCFGHAMFFGTSA 61 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y G ++ + +++ A G+ +G+ +++ G A+ T +++ L+ Sbjct: 62 YITGQFLKVTGSTLEFGLLAGVLVAAAMGLAVGVIAVRRSGIQFAMITFAIAQFVYFFLL 121 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 + + T G+ G+ R G S R Y+V+LG L+ ++I Sbjct: 122 QAE-FTGGEDGMQQIPRSALFGVIDVSDHR-------------AFYFVVLGATVLALALI 167 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 + + R IRDN++ SL KL A +S+ G+AG A + Sbjct: 168 YRIIHSPYGEILRAIRDNEERVESLGFRPERFKLVAMTLSAGIAGLAGGLKATVFQFATL 227 Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318 ++ + VI + +LGG+ +L+ A I+I + + + + + Sbjct: 228 TDVSWTVSGEVIFMTLLGGLGTLAGPAVGAGIVIFMNDELAQFGEWSLIAQGIILLLVIL 287 Query: 319 RHTTLMVIALFLVILMRSHS 338 +V + V+ R Sbjct: 288 FFRRGVVGEIIAVLHKRRAG 307 >gi|316935425|ref|YP_004110407.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315603139|gb|ADU45674.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 286 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 105/303 (34%), Gaps = 26/303 (8%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + L+ + A GL++V G LG+++L+ Y IGAY + + ++L + Sbjct: 9 LNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMIGAYL-ALSLTGMFGDVFLALVAG 67 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ G+ + ++ D + ++++ I +++ + G + Sbjct: 68 IPLAFLLGLAIEWLFIRHLYDRDHLQQVLLTFALILIFNEFQQVVWGSYPHSIPAP---- 123 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 S + + + Y ++ ++ L+ S+ L +++T I R N++ Sbjct: 124 -----SYLAHSVRLTEGLSYPVYRLALMAICVALAISMALIIQKTRIGRLIRAAESNREM 178 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L FA A AG A II +V++GG+ Sbjct: 179 VEALGFDSRLIFRMVFATGVALAATAGMLAAPIESA--YPGIGDRVLIISFVVVVIGGIG 236 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ + ++ + ++ + LV+++R L Sbjct: 237 SVRGAFIGSLLIGLTDAFGKVF--------------LPQFSSIIIYALMALVLVIRPAGL 282 Query: 340 LRL 342 Sbjct: 283 FGR 285 >gi|255291855|dbj|BAH90350.1| branched-chain amino acid ABC transporter, permease protein [uncultured bacterium] gi|255292656|dbj|BAH89765.1| branched-chain amino acid ABC transporter, permease protein [uncultured bacterium] gi|255292841|dbj|BAH89942.1| branched-chain amino acid ABC transporter, permease protein [uncultured bacterium] Length = 342 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 124/329 (37%), Gaps = 30/329 (9%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L L ++ + L + + + ++ L ++ A +++ G GL+S+ Sbjct: 22 LALRGLLVAGTVALAFAPWWAGRADMRLLMEALSFLALAQMWNLLAGYTGLISVGQQAFV 81 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 +G Y + L GL + L +P +A+ + + G + + +G Y AI T +++E+F+ Sbjct: 82 GLGGYLFFALAMFTGLPVVLALPAAALATAIIAVPTGWIAFRLQGAYFAIGTWVIAEVFR 141 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 I + + G + E+ MYY+ + +S Sbjct: 142 LIAAQVGALGGGSG-------------ISLPVDIARSLADGRTEREMVMYYIAFTIGLVS 188 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + + R+ A IRD++ A ++ K + +++ + G+ GAF + Sbjct: 189 VLGVWGVLRSKWGLALTAIRDSEPAAEAVGVATASVKYLIYLITALYTGLVGAFIFLQKL 248 Query: 255 RISPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312 RISPD VI IV++GG+ S+ + + ++ Sbjct: 249 RISPDAAFSVNEWTAFVIFIVVIGGLGSIEGPIIGVIVFFALRQV--------------- 293 Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + L+ V+L+ L Sbjct: 294 AADWGTWYLMLLGAIAIAVMLVDKRGLWG 322 >gi|206889204|ref|YP_002248609.1| branched-chain amino acid ABC transporter, permease protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741142|gb|ACI20199.1| branched-chain amino acid ABC transporter, permease protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 292 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 99/305 (32%), Gaps = 26/305 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + Y + G S+V G +++L +GAY L YG+ +L +P Sbjct: 7 LINGFLLGGFYALIGVGFSLVWGVTNIINLAHGAIALLGAYITFFLFQNYGIDPFLSLPF 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S + G + L LI++ + L+ + V Sbjct: 67 SFLALFIFGYAIQRYLLNLVVKAQIFMLLILTFGIEIFLVNFMTTFFSADFRSVTP---- 122 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 ++ V L F++ + L+L +T A + + + Sbjct: 123 -------DYAGESLIIGDIVIPYIRIIVFLICTFITFILSLFLNKTWAGKAIKATSLDIE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + FA++S G+AG+ F+ ++ S + + ILGG+ Sbjct: 176 AAMMVGINPAKIFALTFAIASGLAGVAGSLFSLTQAF--SPSIAGSLTLRAFIVSILGGL 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + IL V L + + + + LV++++ Sbjct: 234 GRVEGALIGGIILGIVETLSSYFIGESYKNAITLG-------------IMVLVLIIKPTG 280 Query: 339 LLRLR 343 +L + Sbjct: 281 ILGKK 285 >gi|163739270|ref|ZP_02146681.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] gi|161387340|gb|EDQ11698.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] Length = 343 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 115/337 (34%), Gaps = 19/337 (5%) Query: 7 RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66 RL Y ++ + + L+ + A+ + + + ++I+ + A GL++V G + ++ Sbjct: 19 RLAPYAPLILVPVLAIAGLIAVQNPASWLTLTVSGLAMGMMIF-LMASGLTLVFGLMDVI 77 Query: 67 SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126 + ++GA+ + + G +++ ++ + + G Sbjct: 78 NFGHGAFVSVGAFIGISVLLTLGHLTNAPSLGLNLLAILAAVLAAMAATAVMGWAFERVI 137 Query: 127 L--IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184 + + IL+ + + I V + T ++ E + Sbjct: 138 VKPVYGNHLSQILVTMGGLIIAEQLIIVLWGPEEIYFTRPEALKG-ALTFGDAAIEKYRL 196 Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244 + + A++ LRRT I R N + +L + + F SA G+ Sbjct: 197 VTVGVGLAVFAAMRFVLRRTKIGLIVRAGVQNGEMVAALGYRLRLVFIGVFIAGSALAGL 256 Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 G + ++ I+ M I++ +VI+GG+ S+ ++ + + Sbjct: 257 GGVMWGLYQEVITAHM-GNQAMILIFIVVIIGGLGSVEGCFIGALLVGLLQNYIAFVE-- 313 Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 + + +++ R ++ Sbjct: 314 ------------PKLALVSNIALMVAILMWRPMGMIP 338 >gi|163741934|ref|ZP_02149323.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161384655|gb|EDQ09035.1| branched-chain amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] Length = 288 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 97/303 (32%), Gaps = 25/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S +Y + A G ++ + ++ +GA+ + L + L + + Sbjct: 4 LVSGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVTLGLTNAEYLHLPFWLAA 63 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 I+ G+ L + R + Q ++ + Sbjct: 64 PLSIAIMAGLGYLLDLVILRH---------LFGQNQTAVVILTIALGFVIRFFAGAIWGH 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T+ S + + V+ + +++ L+ S+ + +RT + A + NQ Sbjct: 115 EPQTLESPLALGDVQLAGVVLGLADLAIIIVTVLLTWSLYQFFQRTKLGLAMQAASQNQM 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + + + +S A +AG FA+ + D I + ++GG Sbjct: 175 AAYFMGIPVKRVQGLIWGLSGATAAVAGILFASK---GAIDPNAGLLGIKAFAAAVIGGF 231 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL I+ + ++ + + L V++ R H Sbjct: 232 GSLPGALAGGLIVGVIEPFAARYLEAGYSQIAP-------------YVLLLAVLVFRPHG 278 Query: 339 LLR 341 L Sbjct: 279 LFS 281 >gi|94986265|ref|YP_605629.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300] gi|94556546|gb|ABF46460.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Deinococcus geothermalis DSM 11300] Length = 286 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 96/304 (31%), Gaps = 27/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A GL++V G + + + Y +GAY + + G+ + + Sbjct: 8 LFNALALGGVYALVALGLTLVYGVMRVPNFAHGGLYMLGAYFTYAILTGLGVGYVPALLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +A+ ++ + +I + L + G + + + Sbjct: 68 AAVGVALLAALLERVVFYPLRGAPHVHAMIAAIGVLFFLEAAVQLIWGPDFKQIPEPVP- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V+ V++ + + +L+RT + N++ Sbjct: 127 -----------GILNLGGVVITWQRLIVIVASLLVMLGLNFFLKRTLTGATIEAMSQNRE 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + FA+S A +A A A N+ V +I+ILGGM Sbjct: 176 GARLVGINVNRVGMLTFAISGALAAVAAALIAPIISVA--PSMGEVMNLKVFAIIILGGM 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ +L F ++ F L LV+ +R Sbjct: 234 GSVPGAIVGAFLLAFAEVFGGFYINLDFADVIGF-------------AVLVLVLAIRPEG 280 Query: 339 LLRL 342 L R Sbjct: 281 LFRR 284 >gi|149199727|ref|ZP_01876758.1| sugar ABC transporter permease protein [Lentisphaera araneosa HTCC2155] gi|149137132|gb|EDM25554.1| sugar ABC transporter permease protein [Lentisphaera araneosa HTCC2155] Length = 342 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 90/310 (29%), Gaps = 11/310 (3%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60 M+ F K + LL ++ G S + ++ Q+ ++ +F+ G+ +V+ Sbjct: 1 MNQFLKSHRKEVGMTILLIILCIWTAVGSGGRFLSPINVSNLLRQVGLFGIFSMGMGLVI 60 Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 S G + L+ ++ + + IW+ + + + Sbjct: 61 ISAG-IDLSVGSLMSLLGVIFFYTLTGDSPVIWIPELSWPLGLALVLGVSLFVGFVYGLL 119 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 +L V FV Sbjct: 120 IGKFKMQAFIITLCGLLSYRGLSRYIAEDTSVGYIDAKQNLDFLYNACAGTISMGFVKVP 179 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + Y+L+ + + ++ + N++A ++ + +S Sbjct: 180 MAFIYMLIIAAIMIVVLH----KSVFGRYLYAVGRNEEATKYSGINTNKIIIAVYMISCL 235 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGV 294 + FA I+P + + I+ +LGG S+ I T IL+ + Sbjct: 236 LTAFSAILFAFYTSSITPSVHANFYELYAIAAAVLGGCSLRGGEGSIYGIIVGTVILLVI 295 Query: 295 VELCCGMNFY 304 + + + Sbjct: 296 QNMINLLGYP 305 >gi|148260859|ref|YP_001234986.1| inner-membrane translocator [Acidiphilium cryptum JF-5] gi|326404253|ref|YP_004284335.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|146402540|gb|ABQ31067.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Acidiphilium cryptum JF-5] gi|325051115|dbj|BAJ81453.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 294 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 88/301 (29%), Gaps = 24/301 (7%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 IY + A G ++ S+ +++ IGAY V L L WL + ++ Sbjct: 13 LAVGSIYALIALGFVLIYTSVNVVNFAQGDFAMIGAYFMVSLVVVLHLPWWLALLLAVAG 72 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 +G G + L + + +M + + I F Sbjct: 73 TGVVGALFQLLIFQPVRNRPRNFLPVMIATVGASVFLEQAFLLIYGPIPYQLPPIF---- 128 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + V +++ + A + +L RT + + + Sbjct: 129 -----KAQSVALLGVHVYPQYIVIIVVTAAMVALLNWFLERTKLGKQLQATAQDPDTARL 183 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + + FA+S+A G+AG A + + + I+GG S+ Sbjct: 184 MGIRVAWMAALTFAISTALGGLAGLLIAPVYTVTATMGSTIAL--KAFAAAIVGGFGSMK 241 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + F I L L ++ R + L Sbjct: 242 GAIVGGLGIGLIETYGATYISGSYRDAFPF-------------IVLILFLIFRPYGLFGE 288 Query: 343 R 343 + Sbjct: 289 K 289 >gi|87119599|ref|ZP_01075496.1| putative permease abc transporter protein [Marinomonas sp. MED121] gi|86165075|gb|EAQ66343.1| putative permease abc transporter protein [Marinomonas sp. MED121] Length = 360 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 78/309 (25%), Gaps = 18/309 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 +L + L + + Q+ I + ++++ + G + L+ Sbjct: 53 IVLLLAIFGFSLLIGNRFLHPFNLSLILQQVTIIGVIGVAQTLIILTAG-IDLSVGAIMV 111 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + + GL WL + + + G I GL + + + F Sbjct: 112 LCSVVMGRMAIDLGLEAWLALALGISVGALAGFINGLLITRLKIPPFIATLGSWNVFFAI 171 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L K T I L + + + Y L M L Sbjct: 172 NLWYSKSETIRSQDISSIAPL------------LQWTGETINFFGARLTYGSLLMLGLFF 219 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 I L T+ D+ A +S + ++ + Sbjct: 220 LIWYALNWTSWGRHVYATGDDPDAARLAGIQTNRILMSVYVLAGIVCAVGAWVLIGRIGS 279 Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 ISP + + ++VI GG S+ ++ Sbjct: 280 ISPQAGYTANLDSITAVVIGGCSLFGGRGSIYGTLIGALVVGVFRNGLALAGVDVLWQEF 339 Query: 311 KFDCSFNMR 319 + Sbjct: 340 TVGILIILA 348 >gi|325275616|ref|ZP_08141518.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas sp. TJI-51] gi|324099290|gb|EGB97234.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas sp. TJI-51] Length = 292 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 89/292 (30%), Gaps = 24/292 (8%) Query: 50 VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109 + + GL+++ G + +++ IG Y+ ++ +GL + + + + G Sbjct: 19 AIISIGLTLIFGIVRVVNFAHGEFLMIGMYAVYLMNVHFGLHPYATVIPAVALLFVLGAG 78 Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169 M ++ + + L+ + G L + S + Sbjct: 79 MQRFIIQPLLAAEGHIQIFATVGVSIALMNAALMVFGAD---------VLTVSNPSGVGA 129 Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229 + + L + +L T + A R ++ A + + Sbjct: 130 GSLAVGPLRANTGQLLTFMVSLALVGGLHWFLHNTFLGRAVRATAQHRNAALLMGVNVNR 189 Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289 + AF + A +G+A A A F + IV+LGG+ SLS + Sbjct: 190 IYIFAFGLGCACLGLAAAMIAPQYPV--FPTFGTFFVLTAFVIVVLGGLGSLSGALVGSL 247 Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 ++ V L + + +++ R L Sbjct: 248 LIGVVDSLAGYYI-------------APDLKEVVYFLIFLAILIFRPTGLFG 286 >gi|13475997|ref|NP_107567.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14026757|dbj|BAB53353.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 355 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 111/320 (34%), Gaps = 34/320 (10%) Query: 32 ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91 + IYV+ A + + G GL+S+ + + +GAY + I + GL+ Sbjct: 35 PQFLSAGAVDRMTALFIYVILAAMWNALAGFGGLVSVGQQVFFGLGAY-FAIRLADAGLN 93 Query: 92 IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151 + + VSA+I G + L L+ R AI + ++L+ + G+ G Sbjct: 94 PFASLFVSAIIVGLVSWPLSLFMLRLRNGEFAIGMW-VIAALTHLLVNLDRLVQGETGTS 152 Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211 + + + +Y++ LG +I+ L R + A R Sbjct: 153 LISLNVY----------------DAGTRRVAIYWLALGSMTALLAILFGLLRGSTGAAIR 196 Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF-AASRDRISPDMFKFSENIIVI 270 IRDN+ A S+ + K F +++ IG+AGA + A S F +I Sbjct: 197 AIRDNEDAAASVGVRVTGTKRLLFVLAAFGIGVAGALWLATSVTFQPKTYFNVQWTAYMI 256 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 I+++GG+ + + + G + + + L Sbjct: 257 FILLVGGIGTFEGAILGALVFFLIETWFGG---------------TGVWYLVGLGATAVL 301 Query: 331 VILMRSHSLLRLRTPSNFLE 350 L L L Sbjct: 302 FSLFLPRGLWGTIEERFGLR 321 >gi|332294991|ref|YP_004436914.1| ABC-type transporter, integral membrane subunit [Thermodesulfobium narugense DSM 14796] gi|332178094|gb|AEE13783.1| ABC-type transporter, integral membrane subunit [Thermodesulfobium narugense DSM 14796] Length = 302 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 28/290 (9%), Positives = 88/290 (30%), Gaps = 2/290 (0%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G L L++ + +G++ ++ ++ + I Sbjct: 6 LVNGVTLGAVYALIALGYTMVYGILELINFAHGEIFMMGSFFGLLFWWILEMTGFSRIIP 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 +I + + + IA + + ++ + A + Sbjct: 66 IPLIIFLMFIFSMVATAFLGALLEFIAYRPLRSVTNRLIPLISALGASIFLQNFAMLTFG 125 Query: 159 LGTTVRSLIRFF-RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 V I + + ++ + + A + + + +T + + R + + Sbjct: 126 STNRVYPAIFPDVGWDLFHARISLIQVFIFITCILMMAGLTVLVNKTKLGRSMRAVAQDY 185 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + + F + S+ AG + ++ + + + +LGG Sbjct: 186 VTASLMGIRVNRIITITFMIGSSLAAAAGVMYGMYYG-VAKFDMGYLAGLKAFTAAVLGG 244 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 + ++ L + G + + F + + Sbjct: 245 IGNIPGAMLGGFCLGIIESFGAGYISSEYKDMFAFLMLLFILLLRPSGLL 294 >gi|242238259|ref|YP_002986440.1| inner-membrane translocator [Dickeya dadantii Ech703] gi|242130316|gb|ACS84618.1| inner-membrane translocator [Dickeya dadantii Ech703] Length = 352 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 85/264 (32%), Gaps = 3/264 (1%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 L++ A GLS + G G+LS + + Y Y +L +G + Sbjct: 45 LSYFLLWTFCAMGLSAMWGYGGILSFGQTAFFGLAGYVYGVLTLNFGDGFISTWSGFILA 104 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 A G + + + + + ++++ + Sbjct: 105 LAAAGAVASALGYMMFYGGVTGIFVGIVTLSFTLVLETFMSQTAGPQWVIGSARLNGFNG 164 Query: 163 VRSLIRFFRFPSS---FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + F + YY++L + ++ ++ L R + IR+N + Sbjct: 165 MSGMPPLSLPFGGEHPFTLDGNAFYYLILALLVIAYLLMQRLLRGNVGLTLAAIRENPQR 224 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 L I +L F + G++G + I+P + + + V G Sbjct: 225 AEMLGIDIRRYQLLIFTLGGVLSGLSGVLYTQWGSYITPSSMGLTAAAMPVIWVATAGRK 284 Query: 280 SLSKIAKATAILIGVVELCCGMNF 303 SL+ TA+L+ + + Sbjct: 285 SLAGTIAITALLVWLSQWLAVYGS 308 >gi|163850716|ref|YP_001638759.1| inner-membrane translocator [Methylobacterium extorquens PA1] gi|218529438|ref|YP_002420254.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4] gi|254560341|ref|YP_003067436.1| ABC transporter permease [Methylobacterium extorquens DM4] gi|163662321|gb|ABY29688.1| inner-membrane translocator [Methylobacterium extorquens PA1] gi|218521741|gb|ACK82326.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4] gi|254267619|emb|CAX23465.1| ABC transporter, permease [Methylobacterium extorquens DM4] Length = 296 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 105/303 (34%), Gaps = 27/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S ++VM A GLSI+ G LG+++ + +GAY+ + S W + Sbjct: 15 LFSGVALGAVFVMLALGLSIIFGMLGIVNFAHGNVFMVGAYA-GVFVMERTGSFWAALLF 73 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ GA G+++ ++ L+++ +L++ I G G+ A Sbjct: 74 GPLMVGALGLLIERFLIRPLAGRSPDDPLLLTFGLGYVLVEGVRILFGSDGLPFATPEEL 133 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G + I+ +V+ + + ++ L RT + R + + Sbjct: 134 SGV----------ADLGIGFFPIYRLFVVGVVALVLVALWYGLERTRLGLIVRAGARDPE 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L I L FA+ A + G A R ++ ++GGM Sbjct: 184 ILRVLGVDIQRLWLWVFALGIALAALGGVLAAPMRSV--NPEMGNVVLGEAFAVTVIGGM 241 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A ++ VV + + M + LV+L+R Sbjct: 242 GSLMGSVVAGLLVGIVVSMTALFA--------------PEMASIAMFAFMALVLLVRPQG 287 Query: 339 LLR 341 L Sbjct: 288 LFG 290 >gi|86748706|ref|YP_485202.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gi|86571734|gb|ABD06291.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 339 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 116/300 (38%), Gaps = 15/300 (5%) Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80 + + G +Y+ + +IL +FA L +++G G++SL + +GAY+ Sbjct: 23 FVFWIALIGCGLLFPSRYL--IMTEILRIGLFALSLDLILGYAGIVSLGHAAFFGVGAYA 80 Query: 81 YVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 ++ + L + V+ +++ G ++ + TL ++ + + + + Sbjct: 81 AGLMALHGIVGEPVLALLVAGLVAAVLGFATSFLVIRGVDLTRLMVTLGIALLMEALAER 140 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + IT G G+ LG F I+ ++ + + F+ + Sbjct: 141 FSDITGGSDGLQGIVMQPILGL------------FEFDIFGKVAFWYSVAVLFVLFLLAR 188 Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259 + + + R IR+N ++ + + + +++ + G+AGA F + S D Sbjct: 189 RVVHSPFGLSLRAIRNNPLRASAVGIPVNRRLVMVYTLAAFYAGIAGALFTQTTQLASLD 248 Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319 +F F + ++ +++LGG L I + E + Y+ + + Sbjct: 249 VFSFERSADLVLVLVLGGTGYLYGGLIGAVIFKILQEFFSTLTPQYWLFWIGLVLVTIVL 308 >gi|222081238|ref|YP_002540601.1| sugar ABC transporter [Agrobacterium radiobacter K84] gi|221725917|gb|ACM29006.1| sugar ABC transporter [Agrobacterium radiobacter K84] Length = 334 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + L ++ ++L + + I ++ +Q I + A G++ V+ + L+ Sbjct: 27 IFLAFLLLAVILSVSNEYFLTPGNISNVLLQTSINGVLAIGMTFVI-LTRGIDLSVGSVV 85 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ + + + P ++ A G+++G+ LI+S Sbjct: 86 ALTGIISASFATTSATAGIVGAPYPPYVALAVGLLVGVACGAV-------VGLIVSRFAV 138 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + + G+ + + R+ + F I + ++ Sbjct: 139 PAFVATLGMLSAARGLTLIYGGGKPVPALTPDFRWIGTGTVFSIPMPVILLAIVFAVSWW 198 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 RT + N A + + + + +S G+AG +A Sbjct: 199 VL-----NRTRFGRYIYAVGGNPHAANTSGINVTRLRFLVYVISGGLAGLAGMILSARTG 253 Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + + I+ V++ GG+ ++ I+ + M + Sbjct: 254 SA-LPQAGIAYELDAIAAVVIGGTSLSGGVGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312 Query: 309 LLKFDCSFNMRHTT 322 + Sbjct: 313 QVLKGALIVGAVML 326 >gi|239834758|ref|ZP_04683086.1| ribose ABC transporter permease [Ochrobactrum intermedium LMG 3301] gi|239822821|gb|EEQ94390.1| ribose ABC transporter permease [Ochrobactrum intermedium LMG 3301] Length = 334 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 94/314 (29%), Gaps = 20/314 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ +L + I ++ +Q I + A G++ V+ + L+ Sbjct: 27 IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ L + + P S I+ G+++G+ G ++ + Sbjct: 86 ALAGIVSASLATTSATAGIAGAPYSPFIAIPVGLLVGIGCGALVGTIVSRFAVPAFVATL 145 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +L + +T G L + + + + ++ + + Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L R+ + N A + I + S + +S G+AG +A Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMVLSARTG 253 Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 S + I+ V++ GG+ ++ I+ + M + Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGVGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312 Query: 309 LLKFDCSFNMRHTT 322 + Sbjct: 313 QVLKGALIVGAVML 326 >gi|15964230|ref|NP_384583.1| ABC transporter permease [Sinorhizobium meliloti 1021] gi|307301376|ref|ZP_07581138.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] gi|307318048|ref|ZP_07597485.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|11066208|gb|AAG28499.1|AF196574_2 FrcC [Sinorhizobium meliloti] gi|15073406|emb|CAC41914.1| Putative fructose ABC-type transport system, permease component [Sinorhizobium meliloti 1021] gi|306896450|gb|EFN27199.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|306903832|gb|EFN34419.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] Length = 360 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 91/293 (31%), Gaps = 18/293 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + G S + + Q+ I + ++V+ + G + L+ Sbjct: 52 LIVLVLSLIAFGVILGGKFFSAFTMTLILQQVAIVGIVGAAQTLVILTAG-IDLSVGAIM 110 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYG L + + CG I G + + Sbjct: 111 VLSSVIMGQFTFRYGFPPALSVICGLGVGALCGYINGTLVARMKLPPFI----------- 159 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + I +Y A+ + F +F I Y ++ M L Sbjct: 160 -VTLGMWQIVLASNFLYSANETIRAQDISANASILQFFGQNFRIGNAVFTYGVVVMVLLV 218 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L RTA + D+ +A + +S + +S +AG Sbjct: 219 CLLWYVLNRTAWGRYVYAVGDDPEAAKLAGVNVTRMLISIYTLSGLICALAGWALIGRIG 278 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302 +SP +F+ + ++VI GG S+ + I+ M Sbjct: 279 SVSPTAGQFANIESITAVVIGGISLFGGRGSIMGMLFGALIVGVFSLGLRLMG 331 >gi|300689808|ref|YP_003750803.1| branched-chain amino acid transport system permease, membrane component (livH) [Ralstonia solanacearum PSI07] gi|299076868|emb|CBJ49481.1| putative Branched-chain amino acid transport system permease, membrane component (livH) [Ralstonia solanacearum PSI07] Length = 294 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 106/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y M + GL+++ G L +++ + +GA + S Sbjct: 3 IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 L W+++ + + G GM++ L+F + L+++ ++ G Sbjct: 63 YLDLPYWVMLVAAPLAIGVVGMVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G+ + G T F++ + +V+ + + + +T + Sbjct: 123 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVAASLTVCFATWFMIEKTKL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ L + L + +T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVF--------------YPQASSTVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFG 291 >gi|316934431|ref|YP_004109413.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gi|315602145|gb|ADU44680.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 354 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 95/287 (33%), Gaps = 3/287 (1%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V LL S Y ++V A L ++ G G LS + I Y Sbjct: 26 VFVVALLGALAYPMFSDGYTVGNTAYFFVWVFIALSLCLIWGYGGALSFGQTAFFGIAGY 85 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILI 138 SY IL +G + + ++ L + L ++ +L Sbjct: 86 SYGILTLNFGAAYGFTLVAVLAAVAIAAVVALLLGYFMFFGRIEGVFLGIVTLAVTLMLE 145 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--IFMYYVLLGMCFLSAS 196 ++ T G RL + ++ + +YY++L + + Sbjct: 146 RFMAQTAGPDWRIGTARLNGFNGMSGMPPITIPWFDGPIVLFADVGLYYLVLALVVVVYL 205 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + L ++ N IR+N + L I +L F + + G++G + A I Sbjct: 206 GLRILVNSSFGNVIVAIRENPERAEMLGYDIRKYQLVNFVIGAGLAGLSGVLYTAWGQYI 265 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 +P + + + V +GG + L+ T +++ + Sbjct: 266 TPSSMGMTSAALPLIWVAVGGRSDLTSTLVGTLVVLAGFQALTIYGS 312 >gi|254473704|ref|ZP_05087099.1| inner-membrane translocator [Pseudovibrio sp. JE062] gi|211957090|gb|EEA92295.1| inner-membrane translocator [Pseudovibrio sp. JE062] Length = 290 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 95/294 (32%), Gaps = 14/294 (4%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y+ + IY + A G+++V G L L +GA++ + + + +G+S W Sbjct: 6 FVNFYLMPGIVLGSIYALGAVGITLVFGILRFAHLAHGDLATLGAFAALGVVTIFGVSPW 65 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +PV+ ++ + + + + I ++ S +L + G Sbjct: 66 VALPVAMIVCAIMAIGIDKVFYDYLSERPKIIVVMSSLGIALMLRAVVQVIWGVDTETYT 125 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + IR Y ++ M + + +L++T A R + Sbjct: 126 RGIVRPEDYWGIRIRDREI------------YTIIAMFVIVGVLWAFLQKTKWGKAMRAM 173 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 DN + + + +G F + + + ++ + + + Sbjct: 174 SDNPDLALLSGVDNRKITMLTWGIVGILCAASGFFLGINTEL--KPLMGWTMLLPMFAAA 231 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 ILGG+ + I+ E + + + F + + Sbjct: 232 ILGGVGRVEGAVIGGLIVGIAEETSVLFIPGEYKAAMAFAILLLILLVRPTGLL 285 >gi|117928290|ref|YP_872841.1| inner-membrane translocator [Acidothermus cellulolyticus 11B] gi|117648753|gb|ABK52855.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Acidothermus cellulolyticus 11B] Length = 312 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 20/313 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------YVILGSRYGL 90 + S +Y + A G ++V G L L++ + G + + I Sbjct: 9 DFFVSGLANGFVYALIALGYTLVYGVLQLINFAHSEVFMSGGFGGLFAINFAIGSRHPHG 68 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + + + +GA + L+ F I AG Sbjct: 69 LSSVWFVLVGLAAGAVTGGVVAYILERVAYRPLRRRNAPKLAFLISAIGMSYFLYNLAGK 128 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 + F ++ + + + + +++T + Sbjct: 129 EFGRDARTMKPPFTVSPNKPLFTVFGAPVNLYDAVIAVSAIAMLILLDRVVQQTRLGQGI 188 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270 R + + + I F + G AG F +S M F+ I Sbjct: 189 RAVAQDADTAALMGVNIDRVIAQTFVLGGLLGGAAGFLFGLGTAGVSYTM-GFTPGIKAF 247 Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + +LGG+ ++ +L V L + ++ F L L Sbjct: 248 TAAVLGGIGNIRGAMLGGLLLGVVENLSSACFGASWVDVVAFY-------------ILVL 294 Query: 331 VILMRSHSLLRLR 343 V+L+R LL R Sbjct: 295 VLLVRPMGLLGER 307 >gi|329915395|ref|ZP_08276251.1| Urea ABC transporter, permease protein UrtC [Oxalobacteraceae bacterium IMCC9480] gi|327544931|gb|EGF30279.1| Urea ABC transporter, permease protein UrtC [Oxalobacteraceae bacterium IMCC9480] Length = 380 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 95/353 (26%), Gaps = 36/353 (10%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + ++ L + + + + + L Y A GL + G G+LSL + + Sbjct: 14 GAIGLLVLGALLIVVFPLLLDSFRLGLVGKYLSYAFVAVGLVLCWGYGGILSLGQGVFFG 73 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM------ 129 +G Y + S + L L + Sbjct: 74 VGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITELPMMWQPFHSLGLTILLVLAV 133 Query: 130 ----------------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173 ++ I L + L + Sbjct: 134 PTLIAFILGVAMFKRRVGDVYFSIVTQAVAAILAILIVGQQGLTGGVNGITDLKTMLGWD 193 Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233 ++ +Y+V + + ++ + + +RD ++ + K+ Sbjct: 194 IRTDSAKLILYFVTVALLLACVLFGRFILTSKLGRLLMAMRDKEERVRFSGYDVASFKIF 253 Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293 F V++AF + GA F +SP +I ++ +GG SL T ++ Sbjct: 254 VFCVAAAFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMSLLGAIYGTLLVNF 313 Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346 F +F LM V++ + + L Sbjct: 314 GKTY--------------FSETFPELWLFLMGGLFITVVMYFPNGIAGLYESH 352 >gi|284045827|ref|YP_003396167.1| inner-membrane translocator [Conexibacter woesei DSM 14684] gi|283950048|gb|ADB52792.1| inner-membrane translocator [Conexibacter woesei DSM 14684] Length = 294 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 89/305 (29%), Gaps = 24/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + Y + A +++V G L L + +G Y+ + G ++ V Sbjct: 8 LLDGLALGSFYSLLALSVALVFGLLHLANFAHGELLMVGGYALY---AMEGAPFPFVVLV 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ ++M + + D LI + +L G Sbjct: 65 VVIVVVLMAVLMERLAFRPLRDADPTTLLISAFAVAYLLQSLALFAFGG----------R 114 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T + + + + L + +LRR+ I R ++ + Sbjct: 115 PKTVEVASFASGSIDLLGLHLSVLDLVNVGAAAVLLGGLAAFLRRSPIGTQMRAAAEDFR 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L AFA+S F + A ++P M + +I ++GGM Sbjct: 175 MARLLGVRANRVIAVAFAISGLFAAVTVILLVAQSGTVTPTM-GLAPVLIAFVATVVGGM 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L A +L V L + A+ V+L+R Sbjct: 234 GRLGGSAVGGFLLGIVTVLLQTY----------LPDGLVPFRDAFLFSAVIAVLLVRPQG 283 Query: 339 LLRLR 343 L + Sbjct: 284 LFGSK 288 >gi|163747297|ref|ZP_02154651.1| branched-chain amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] gi|161379407|gb|EDQ03822.1| branched-chain amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] Length = 304 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 89/308 (28%), Gaps = 14/308 (4%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 + + IY M A G++++ G + L++ A ++ ++ + ++L Sbjct: 5 PQLLFDALSLGGIYAMAALGIALIFGVMKLVNFAHGEYIAFCVFALIVPSTDAVAVMFLG 64 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 + ++ +I ++ + + + R Sbjct: 65 KAPAILLIPLLLLIGAAIAVASEFFVFRHMRNATPVAMMISSFALGFVIQNTLLLVYSSR 124 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + V+ + ++ L L+RT I R + Sbjct: 125 PKAVSLW---PELNQPVSIAGASIPLLQIIVICTTLLVVVTLALLLKRTRIGLEMRAAAE 181 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 N L AFA+S A A A ++ ++ ++ ++ Sbjct: 182 NFTMARLLGVRANVVITGAFALSGALAA-AVALIMVTQTGVADIRMGGQIMLVAFIATVI 240 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG+ SL A ++ + G + + + +L+R Sbjct: 241 GGLGSLPGAVAAGFLIGAASVILQGF----------LPLEARPFRDAFLYTLVIVSLLLR 290 Query: 336 SHSLLRLR 343 L R Sbjct: 291 PDGLFAPR 298 >gi|154244003|ref|YP_001414961.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gi|154158088|gb|ABS65304.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 280 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 113/316 (35%), Gaps = 43/316 (13%) Query: 36 QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95 Y+ + + + VM A+ + + + G L+L AIGAY L + Y +W Sbjct: 2 SGYLTGVLVVLAFNVMAAYAVYLPLA-AGQLNLGIAGFMAIGAYGSAFLTNEYMWPMWAA 60 Query: 96 IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155 IP A+ +G G+++GLP L+ G Y A+AT + ++ + + + + Sbjct: 61 IPAGALAAGLTGLLIGLPVLRTHGIYFAMATFALGQVISALFLNLEVVGGAA-------- 112 Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215 + + + V+ ++L++ RT + ++ Sbjct: 113 -------------------GYPVTDYAGPNVVFAAAAGVVVLMLYISRTRFALELTAVKS 153 Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275 + L + K++AFA+ + G GA +A + + F ++ + V+ Sbjct: 154 DATVADLLGVPVRGMKVAAFALGAMVAGFGGALYAHHYNFVEAQHFNVLLSVFTVLYVLF 213 Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335 GG ++ V EL + + + + + + + +R Sbjct: 214 GGTQTVWGPLVGAVFFTLVPELLR---------------ASDQWRYAVFAVFIIVFMALR 258 Query: 336 SHSLLRLRTPSNFLER 351 L+ F R Sbjct: 259 PQGLVTAALFRLFRRR 274 >gi|90423204|ref|YP_531574.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gi|90105218|gb|ABD87255.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 291 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 73/297 (24%), Gaps = 26/297 (8%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 +Y + A G ++ + +++ + AY V+ G WL + Sbjct: 16 AVYALVALGFVLIFRATNVVNFAQGEFSMVAAYLMVVFAVDLGWPYWLSFLCALAGMALL 75 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 G I L + +I + ++ G + Sbjct: 76 GAIFNLGVYYPLRHRTFLPVIIATIGASILMANSVLAIYGPQPQV-----------LEGW 124 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 V + ++ C L A + T + + +++ L + Sbjct: 125 FETPGIQLGPVYLDSQYLLIIAVTCALVAFNYWFFEHTMLGKKLQATSQDKEMASLLGIS 184 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + + F S+ G+AG A + + + I+GG ++ Sbjct: 185 VSGMIMITFIYSAVLGGLAGILVAPVLFV--SIQMGSTIALKAFAATIIGGFGDVTGAII 242 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 L + + F R + R Sbjct: 243 GGLSLGIIETFGAAYISVPYKDAFAFLVLVLFLVF-------------RPQGIFGER 286 >gi|309781987|ref|ZP_07676717.1| branched-chain amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308919053|gb|EFP64720.1| branched-chain amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 315 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 27/321 (8%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + L+ M + GL+++ +G+L+ Y +GAY ++ W + Sbjct: 7 NLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVVSGYL--GFWPALI 64 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 V+ ++ GA G ++ L+ Y +A L+ + ++ + + G L Sbjct: 65 VAPLLVGALGAVVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 115 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + V + F + + +++L + I L L RT I + + Sbjct: 116 AVPYRVPDALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 175 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +L + + F A G+AG ++ + IV + ++GG Sbjct: 176 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 233 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL------- 330 M SL A+ ++ + ++ + L K + N + V L + Sbjct: 234 MGSLVGAFVASLLIGCIQTFAVTLDISVTSVLGKIGVTLNPDVPLISVWNLTIAQVAPVL 293 Query: 331 -------VILMRSHSLLRLRT 344 +++ R L+ R Sbjct: 294 PYLLLVLMLIFRPRGLMGTRE 314 >gi|297623210|ref|YP_003704644.1| inner-membrane translocator [Truepera radiovictrix DSM 17093] gi|297164390|gb|ADI14101.1| inner-membrane translocator [Truepera radiovictrix DSM 17093] Length = 433 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/381 (11%), Positives = 108/381 (28%), Gaps = 70/381 (18%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L + V Y ++ + S +Y + A G ++V G + L++ + Sbjct: 64 LIIGRVAYLIVGTGNYTLAFFVGALLSALQLGSLYALIALGYTMVYGIIRLINFAHGEVF 123 Query: 75 AIGAYSYVILGSRYGL-------------------------------------------- 90 +GA++ L + Sbjct: 124 MVGAFTSFFLFANTPYSLPWALFAAALAAAGLMYAVNLWRGKLQDPVVLGAGALGFVGFT 183 Query: 91 --------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + ++ +I+G G+ + + + I+ LI + L + Sbjct: 184 LALSAASLNWIAAMLLAMLITGVVGITLDRVAYRPLRGAPRISLLITAIAMSFFLQNFGL 243 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 + + + + F + V + + L L ++ L++ Sbjct: 244 LAFTRNQTPYRPATSW------TQFLQFPLAGNTVFTSRMVILIPLVTLVLVVALTLFVN 297 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-F 261 RT + A R + + + + + F + S AG + + ++ F Sbjct: 298 RTRLGKAMRASAQDPEVAQMMGINVNRVIATTFFLGSTLAAAAGVLWGLNFGSLNQPAIF 357 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 + + ++GG+ SL +L + M Sbjct: 358 GLLPGLKAFAAAVIGGIGSLPGAVIGGLLLGFLENFVPAMF-----------AGTTEFKD 406 Query: 322 TLMVIALFLVILMRSHSLLRL 342 T L +++L+R ++ Sbjct: 407 TFAFFLLIVILLIRPSGIIGE 427 >gi|222106236|ref|YP_002547027.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium vitis S4] gi|221737415|gb|ACM38311.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium vitis S4] Length = 349 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 84/309 (27%), Gaps = 10/309 (3%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 VV + L A S ++ +Q+ G + V+ G + L+ A+ Sbjct: 39 LVVLAAVFALTSNAFLSVNNGMTIALQVTSIAFLGIGATYVI-ITGGIDLSVGSVLALAG 97 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 + G +W+ + + + ACG+I GL + + +M L Sbjct: 98 VVAALAVKELGAPVWIGMVLGVLTGTACGVINGLVITRLKLPPFIATLGMMLIARGVALQ 157 Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198 G S+ SF + +++ + + Sbjct: 158 ITGARAVSGLGESFGVLGNGSLLRFESIDDQGFPVVSFPGIPYPVVLMVVIAVAAAFVL- 216 Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258 RT + N A + + VS G+ G + P Sbjct: 217 ---NRTVLGRHIYATGSNADAAQLSGVNVARVTAFTYIVSGTLAGLTGCMLMSRLVTAQP 273 Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 + E + S VI +GG+ ++S ++ + F + Sbjct: 274 NEGVAYELDAIASAVIGGTSLIGGVGTISGTFIGAFVIGILRNGLNMNGVSAFTQQIIIG 333 Query: 314 CSFNMRHTT 322 Sbjct: 334 LVILGTVWI 342 >gi|18310611|ref|NP_562545.1| ribose ABC transporter [Clostridium perfringens str. 13] gi|110798946|ref|YP_696314.1| ribose ABC transporter, permease protein [Clostridium perfringens ATCC 13124] gi|168207155|ref|ZP_02633160.1| ribose ABC transporter, permease protein [Clostridium perfringens E str. JGS1987] gi|168209300|ref|ZP_02634925.1| ribose ABC transporter, permease protein [Clostridium perfringens B str. ATCC 3626] gi|168217979|ref|ZP_02643604.1| ribose ABC transporter, permease protein [Clostridium perfringens NCTC 8239] gi|18145292|dbj|BAB81335.1| probable ribose ABC transporter [Clostridium perfringens str. 13] gi|110673593|gb|ABG82580.1| ribose ABC transporter, permease protein [Clostridium perfringens ATCC 13124] gi|170661450|gb|EDT14133.1| ribose ABC transporter, permease protein [Clostridium perfringens E str. JGS1987] gi|170712549|gb|EDT24731.1| ribose ABC transporter, permease protein [Clostridium perfringens B str. ATCC 3626] gi|182379963|gb|EDT77442.1| ribose ABC transporter, permease protein [Clostridium perfringens NCTC 8239] Length = 311 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 93/312 (29%), Gaps = 27/312 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + V+ +++ + S I ++ Q+ + + A G++ V+ G + L+ A Sbjct: 15 LIGLVLLCIVITIVTPNFLSVSNITNVFTQVSVNAIIAIGMTFVI-LTGGIDLSVGSTLA 73 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 I + G ++L I V+A+I A G+I GL K + Sbjct: 74 ISGAVGASIVKSTGN-VFLAIIVAAVIGIAVGLINGLLVSKGKLQ-------AFIVTLAT 125 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + I G ++ + F P I + L Sbjct: 126 MTIFRGATLVFTDGTPISKLPEAFVKIGNGKLGFMPIPVIITIIIAIIAVYAL------- 178 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +T + N+ A K + VS +AG + Sbjct: 179 ------SQTRFGRYLYALGGNEDASRLSGINTDKIKTLVYVVSGFASAIAGVIITSRIGS 232 Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 SP+ E + ++VI GG +++ I+ + MN F + Sbjct: 233 ASPNAGTGFELDAIAAVVIGGTSLAGGEGTITGTLIGALIIGVLNNGLNLMNVSPFYQSI 292 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 293 VKGLVILIAVLL 304 >gi|296331302|ref|ZP_06873774.1| ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676288|ref|YP_003867960.1| urea ABC transporter permease protein UrtB [Bacillus subtilis subsp. spizizenii str. W23] gi|296151417|gb|EFG92294.1| ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414532|gb|ADM39651.1| urea ABC transporter, permease protein UrtB [Bacillus subtilis subsp. spizizenii str. W23] Length = 300 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 90/309 (29%), Gaps = 17/309 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + I ++ A GL+I G + ++++ GAY+ ++ + + + Sbjct: 8 LFNGISLGSILILIAIGLAITFGLMNIMNMAHGELIMAGAYTTYVVQQLFLSYLPAPLFS 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + + L + + + +A + Sbjct: 68 YYFLIAIIMAFAVAALIGIVIEKVIVRRLYDRPLDSLLATWGVSLILQQAARSIFGAPNV 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + ++L + F A + +L +T+ + + N+ Sbjct: 128 AVK--SPEWLTGGVTLFSVTFPYKRLFILALVLFTLALLGFYLFKTSAGRRMQAVTLNRS 185 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L ++ AFA+ S G+AG+ S + IVILGG+ Sbjct: 186 MASCLGVSVRKTDTLAFALGSGLAGIAGSSLTLLGSI--GPTLGSSYLVDAFMIVILGGI 243 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 L + + ++ + L + R Sbjct: 244 GKLKGTIIGAVTVGLLSTFVEYSTSATIAK-------------VVVFACIILFLQWRPSG 290 Query: 339 LLRLRTPSN 347 L +RT Sbjct: 291 LASVRTRLL 299 >gi|83950238|ref|ZP_00958971.1| ABC transporter permease protein [Roseovarius nubinhibens ISM] gi|83838137|gb|EAP77433.1| ABC transporter permease protein [Roseovarius nubinhibens ISM] Length = 297 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 95/307 (30%), Gaps = 15/307 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + ++ + A GL+++ G + ++L + Y +G Y + Sbjct: 1 MNGLQFGVLLFLIAAGLTLIFGIMDFVNLAHGVLYMVGGYLMAT----------FVALTG 50 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + G + + +YL I L +L + + G+ + L Sbjct: 51 SFTMGLLLALPTALVVGLALEYLVIRKLYHRSHLDQVLATFGLLMIITEGVKILWGSSPL 110 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + L+ V Y I+ ++ +A + L + T I R N+ Sbjct: 111 SVPIPPLLDGAIPLIGQVKYPIYRLAIIATGLAAAAGLYLIVNHTRIGMLLRAGATNRNM 170 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 +L I FA AG A + I+ +V++GG+ Sbjct: 171 VAALGVNISRLFRLVFAFGVMLACFAGMMVAPILSVDTGMGESIL--ILTFVVVVIGGIG 228 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336 S+ ++ V L + + + T L+ I + +++ + Sbjct: 229 SIRGAFLGALLVATVDTLGGTFGPILLRMVFDPATASQVGRTLAPMLVYILMAIILFAKP 288 Query: 337 HSLLRLR 343 L + Sbjct: 289 AGLFGRK 295 >gi|160895528|ref|YP_001561110.1| inner-membrane translocator [Delftia acidovorans SPH-1] gi|160361112|gb|ABX32725.1| inner-membrane translocator [Delftia acidovorans SPH-1] Length = 290 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 96/291 (32%), Gaps = 25/291 (8%) Query: 53 AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112 A GL+++ G +G+++L Y IGAY L G ++ ++ G + Sbjct: 24 ASGLTLIFGIMGVINLAHGSFYMIGAYMAFALSPLLGQHFITMLLAGVALTVVLGYALEW 83 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 + + + ++M+ + + + + G V + + Sbjct: 84 AFFSYLYEREHLQQVLMTFGLILVFEELRSLLAGNDVHGVP---------LPGWLSGSFS 134 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 + Y + + ++ ++ + RT + R N+ L + Sbjct: 135 LGGLMSYPWYRLFASGVCLLVALALYWVVNRTRLGMMVRAGASNRDMVRGLGIDVKRLYR 194 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 FA+ A +AG A + II +V++GG+ S++ A+ ++ Sbjct: 195 IVFAIGVALAALAGMIAAPMSSV--YPGMGGNVLIICFVVVVIGGIGSITGALLASLLVG 252 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 V F + + + +V++ R L+ R Sbjct: 253 FVDTFGKLF--------------FQELSGMSVYLLMAVVLVGRPQGLMGQR 289 >gi|33597861|ref|NP_885504.1| putative branched-chain amino acid transport permease [Bordetella parapertussis 12822] gi|33602764|ref|NP_890324.1| putative branched-chain amino acid transport permease [Bordetella bronchiseptica RB50] gi|33574290|emb|CAE38623.1| putative branched-chain amino acid transport permease [Bordetella parapertussis] gi|33577206|emb|CAE35763.1| putative branched-chain amino acid transport permease [Bordetella bronchiseptica RB50] Length = 295 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 110/315 (34%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y M + GL+++ G L +++ Y +GA+ + S Sbjct: 4 LFGIPIQALLGQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMLGAFVAWMGLS 63 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 GL+ W+++ ++ ++ G G+++ L+ + L+++ ++ G Sbjct: 64 YLGLNYWIMLILAPLVVGLFGILIEKLLLRHLYKLDHLYGLLLTFGLTLLIEGLFRSFYG 123 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F++ + +V++ + + + RT + Sbjct: 124 VSGQPYPTPEALRGAT----------NLGFMVLPNYRAWVVVASITVCLATWFVIERTRL 173 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N + + + + A G AG A + + Sbjct: 174 GALLRAGTENPRLVEAFGVNVPRMITLTYGFGVALAGFAGVLAAPVLQI--SPLMGSNLI 231 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I+V ++V++GGM S+ L + L + T++ I Sbjct: 232 IVVFAVVVIGGMGSIMGAIVTGLGLGVIEGLTKVF--------------WPEASNTVVFI 277 Query: 327 ALFLVILMRSHSLLR 341 + +V+L+R L Sbjct: 278 IMAIVLLLRPAGLFG 292 >gi|17986675|ref|NP_539309.1| ribose ABC transporter permease [Brucella melitensis bv. 1 str. 16M] gi|23502492|ref|NP_698619.1| ribose ABC transporter permease [Brucella suis 1330] gi|62290507|ref|YP_222300.1| ribose ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|82700426|ref|YP_415000.1| inner-membrane translocator:voltage-dependent potassium channel [Brucella melitensis biovar Abortus 2308] gi|148559036|ref|YP_001259492.1| ribose ABC transporter permease [Brucella ovis ATCC 25840] gi|161619569|ref|YP_001593456.1| hypothetical protein BCAN_A1668 [Brucella canis ATCC 23365] gi|189024733|ref|YP_001935501.1| inner-membrane translocator [Brucella abortus S19] gi|225853099|ref|YP_002733332.1| hypothetical protein BMEA_A1683 [Brucella melitensis ATCC 23457] gi|237816014|ref|ZP_04595011.1| ribose ABC transporter permease [Brucella abortus str. 2308 A] gi|254689808|ref|ZP_05153062.1| hypothetical protein Babob68_06498 [Brucella abortus bv. 6 str. 870] gi|254694300|ref|ZP_05156128.1| hypothetical protein Babob3T_06479 [Brucella abortus bv. 3 str. Tulya] gi|254697951|ref|ZP_05159779.1| hypothetical protein Babob28_09650 [Brucella abortus bv. 2 str. 86/8/59] gi|254702347|ref|ZP_05164175.1| hypothetical protein Bsuib55_16012 [Brucella suis bv. 5 str. 513] gi|254704876|ref|ZP_05166704.1| hypothetical protein Bsuib36_13343 [Brucella suis bv. 3 str. 686] gi|254730842|ref|ZP_05189420.1| hypothetical protein Babob42_06514 [Brucella abortus bv. 4 str. 292] gi|256045247|ref|ZP_05448144.1| hypothetical protein Bmelb1R_12200 [Brucella melitensis bv. 1 str. Rev.1] gi|256114199|ref|ZP_05454953.1| hypothetical protein Bmelb3E_15417 [Brucella melitensis bv. 3 str. Ether] gi|256258061|ref|ZP_05463597.1| hypothetical protein Babob9C_12103 [Brucella abortus bv. 9 str. C68] gi|256263412|ref|ZP_05465944.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2 str. 63/9] gi|256370046|ref|YP_003107557.1| ribose ABC transporter, permease protein [Brucella microti CCM 4915] gi|260547038|ref|ZP_05822777.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038] gi|260565160|ref|ZP_05835644.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1 str. 16M] gi|260565886|ref|ZP_05836356.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40] gi|260755340|ref|ZP_05867688.1| monosaccharide-transporting ATPase [Brucella abortus bv. 6 str. 870] gi|260758563|ref|ZP_05870911.1| monosaccharide-transporting ATPase [Brucella abortus bv. 4 str. 292] gi|260762385|ref|ZP_05874728.1| monosaccharide-transporting ATPase [Brucella abortus bv. 2 str. 86/8/59] gi|260884358|ref|ZP_05895972.1| monosaccharide-transporting ATPase [Brucella abortus bv. 9 str. C68] gi|261214607|ref|ZP_05928888.1| monosaccharide-transporting ATPase [Brucella abortus bv. 3 str. Tulya] gi|261752911|ref|ZP_05996620.1| monosaccharide-transporting ATPase [Brucella suis bv. 5 str. 513] gi|261755571|ref|ZP_05999280.1| monosaccharide-transporting ATPase [Brucella suis bv. 3 str. 686] gi|265991676|ref|ZP_06104233.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 1 str. Rev.1] gi|265995514|ref|ZP_06108071.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 3 str. Ether] gi|297248887|ref|ZP_06932605.1| ribose transport system permease [Brucella abortus bv. 5 str. B3196] gi|306843001|ref|ZP_07475629.1| ribose ABC transporter permease [Brucella sp. BO2] gi|17982295|gb|AAL51573.1| ribose transport system permease protein rbsc [Brucella melitensis bv. 1 str. 16M] gi|23348486|gb|AAN30534.1| ribose ABC transporter, permease protein [Brucella suis 1330] gi|62196639|gb|AAX74939.1| RbsC-2, ribose ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82616527|emb|CAJ11605.1| Bacterial inner-membrane translocator:Voltage-dependent potassium channel [Brucella melitensis biovar Abortus 2308] gi|148370293|gb|ABQ60272.1| ribose ABC transporter, permease protein [Brucella ovis ATCC 25840] gi|161336380|gb|ABX62685.1| Hypothetical protein BCAN_A1668 [Brucella canis ATCC 23365] gi|189020305|gb|ACD73027.1| Bacterial inner-membrane translocator [Brucella abortus S19] gi|225641464|gb|ACO01378.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|237789312|gb|EEP63523.1| ribose ABC transporter permease [Brucella abortus str. 2308 A] gi|256000209|gb|ACU48608.1| ribose ABC transporter, permease protein [Brucella microti CCM 4915] gi|260096088|gb|EEW79965.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038] gi|260151228|gb|EEW86322.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1 str. 16M] gi|260155404|gb|EEW90484.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40] gi|260668881|gb|EEX55821.1| monosaccharide-transporting ATPase [Brucella abortus bv. 4 str. 292] gi|260672817|gb|EEX59638.1| monosaccharide-transporting ATPase [Brucella abortus bv. 2 str. 86/8/59] gi|260675448|gb|EEX62269.1| monosaccharide-transporting ATPase [Brucella abortus bv. 6 str. 870] gi|260873886|gb|EEX80955.1| monosaccharide-transporting ATPase [Brucella abortus bv. 9 str. C68] gi|260916214|gb|EEX83075.1| monosaccharide-transporting ATPase [Brucella abortus bv. 3 str. Tulya] gi|261742664|gb|EEY30590.1| monosaccharide-transporting ATPase [Brucella suis bv. 5 str. 513] gi|261745324|gb|EEY33250.1| monosaccharide-transporting ATPase [Brucella suis bv. 3 str. 686] gi|262766627|gb|EEZ12416.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 3 str. Ether] gi|263002460|gb|EEZ15035.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 1 str. Rev.1] gi|263093425|gb|EEZ17475.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2 str. 63/9] gi|297176056|gb|EFH35403.1| ribose transport system permease [Brucella abortus bv. 5 str. B3196] gi|306286824|gb|EFM58363.1| ribose ABC transporter permease [Brucella sp. BO2] gi|326409647|gb|ADZ66712.1| Bacterial inner-membrane translocator [Brucella melitensis M28] gi|326539351|gb|ADZ87566.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 334 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ +L + I ++ +Q I + A G++ V+ + L+ Sbjct: 27 IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ + ++ P S I+ G+++G+ G ++ + Sbjct: 86 ALAGIVSASFATTSAMAGIAGAPYSPFIAICVGLLVGIGCGALVGTIVSRFAVPAFVATL 145 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +L + +T G L + + + + ++ + + Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L R+ + N A + I + S + +S G+AG +A Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253 Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 S + I+ V++ GG+ ++ I+ + M + Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGIGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312 Query: 309 LLKFDCSFNMRHTT 322 + Sbjct: 313 QVLKGALIVGAVML 326 >gi|302342737|ref|YP_003807266.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075] gi|301639350|gb|ADK84672.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075] Length = 302 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 87/294 (29%), Gaps = 2/294 (0%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 + + + Y + A G ++V G L L++ + +GAY + + + L Sbjct: 6 QNVLNALQWGSFYALIALGYTLVYGVLSLINFAHGDIFMVGAYVAYFAATMFLGEVGLGP 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 V+ + M+ + + +A L + ++ + L Sbjct: 66 GVTLALIVPLTMLAT-ACVGVALERIAYRPLRRKGAHRLYVVITALMCGLILENGNLALL 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + L+ + + + V+ A + + +T I A R I + Sbjct: 125 GASRKSFPELVPTTVYAFAGLSVTNLKLAVIATAVAAFAVLHFIVTKTKIGLAMRGIAWD 184 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 A + + F + S G+AG FA + + P M ++G Sbjct: 185 SFAIPLMGVPPDRIIVFTFILGSGMAGLAGVMFAMAYPVLEPYM-GALIGWKAFIAAVIG 243 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 G+ + +L + + L+ F + Sbjct: 244 GIGDIRGAFLGGFLLAFLEIGVAAVFPSTMRDLIAFSVLLVFMWQRPTGVFGVA 297 >gi|226306810|ref|YP_002766770.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226185927|dbj|BAH34031.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 347 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 23/304 (7%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 L+ + GLS++ G+ GL + +GA + ++ + +G + + + ++ Sbjct: 64 LRFGLVIAIAGVGLSLIYGTTGLTNFAHGEMVTLGAVAAWVINTSFG----VPLIPATIL 119 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + G+ +GL + L + + + + Sbjct: 120 AIFVGIGIGLLTNGIVWKPLRKRKTGLIAQLVVSIGLAISLR-----YLILIFFSDRAEP 174 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + V++ + + L L++T I A R + DN+ S Sbjct: 175 FDDYQGQVEKNWGPIALTDANAIVMIVSLVVLVGVALLLQKTRIGKAMRAVSDNRDLAAS 234 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENIIVISIVILGGMTSL 281 + + + + + G F S F +++ + + LGG+ + Sbjct: 235 SGINVERVIMFVWGLGGGLAALGGVLFGISELGGRVQWEMGFKLLLLMFAGITLGGLGTA 294 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I+ +V+L + + + R +L Sbjct: 295 YGALLGCVIVGLLVQLSTLIINPDLKYIGGLLVLIVILVV-------------RPQGILG 341 Query: 342 LRTP 345 R Sbjct: 342 SRQR 345 >gi|119387519|ref|YP_918553.1| inner-membrane translocator [Paracoccus denitrificans PD1222] gi|119378094|gb|ABL72857.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Paracoccus denitrificans PD1222] Length = 290 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 86/307 (28%), Gaps = 27/307 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +++ S +Y + A G +I+ + +++ +G + + Sbjct: 6 QFLFSGLTVGAVYALVALGFTIIYNASDVVNFAQGEFVMLGGMITWFAHAAGLPLPLAAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + I L RG + +I + + + Sbjct: 66 IAIVATAALGVAINKLAIEPARGAPVVSLIIITIGASVFLQGAAQLV------------F 113 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + +V+ G + A + L+ RT + A +N Sbjct: 114 DKQIHSFPAFSGDTPLRIGGATIQPQSLWVIGGALVVFAGLWLFFTRTLLGRAVLATSNN 173 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + A + F +FA+S+ +AG ++ + + +LG Sbjct: 174 RLAAQLVGINTNFVMTLSFALSAGIGALAGVLATP--ITLTAYNVGIGFALKGFAGAMLG 231 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM + ++ + L G + F + + LV+ Sbjct: 232 GMGNPKGALAGGFLIGLIEALTAGYLSSTYKEAAAF-------------VVILLVLFFMP 278 Query: 337 HSLLRLR 343 L + Sbjct: 279 QGLFGRK 285 >gi|62317709|ref|YP_223562.1| branched-chain amino acid ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|83269692|ref|YP_418983.1| inner-membrane translocator [Brucella melitensis biovar Abortus 2308] gi|189022966|ref|YP_001932707.1| Bacterial inner-membrane translocator [Brucella abortus S19] gi|254691213|ref|ZP_05154467.1| Bacterial inner-membrane translocator [Brucella abortus bv. 6 str. 870] gi|254695483|ref|ZP_05157311.1| Bacterial inner-membrane translocator [Brucella abortus bv. 3 str. Tulya] gi|254698999|ref|ZP_05160827.1| Bacterial inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59] gi|254732446|ref|ZP_05191024.1| Bacterial inner-membrane translocator [Brucella abortus bv. 4 str. 292] gi|256256400|ref|ZP_05461936.1| Bacterial inner-membrane translocator [Brucella abortus bv. 9 str. C68] gi|260544950|ref|ZP_05820771.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038] gi|260756814|ref|ZP_05869162.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260760245|ref|ZP_05872593.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|260763483|ref|ZP_05875815.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260882631|ref|ZP_05894245.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|261215871|ref|ZP_05930152.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|62197902|gb|AAX76201.1| branched-chain amino acid ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82939966|emb|CAJ12995.1| Bacterial inner-membrane translocator [Brucella melitensis biovar Abortus 2308] gi|189021540|gb|ACD74261.1| Bacterial inner-membrane translocator [Brucella abortus S19] gi|260098221|gb|EEW82095.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038] gi|260670563|gb|EEX57503.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|260673904|gb|EEX60725.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260676922|gb|EEX63743.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260872159|gb|EEX79228.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|260917478|gb|EEX84339.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] Length = 298 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 33/274 (12%), Positives = 84/274 (30%), Gaps = 14/274 (5%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107 + + A GL+++ G + +++ G + ++ ++ GL + + + + Sbjct: 18 FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + L A + + +I + G + Sbjct: 78 LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126 Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227 + ++ LG L ++ L+L+ + A R + ++ A + + Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186 Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287 + F + +A +G+A A S F +V+LGG+ S+ Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244 Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 I+ + + + F + Sbjct: 245 ALIIGVIDTMSGYYIGSDLREAVVFGIFLLILIL 278 >gi|319794457|ref|YP_004156097.1| inner-membrane translocator [Variovorax paradoxus EPS] gi|315596920|gb|ADU37986.1| inner-membrane translocator [Variovorax paradoxus EPS] Length = 298 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 89/309 (28%), Gaps = 23/309 (7%) Query: 37 KYIDSMGIQILIYV----MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 + ++ I LIY + A GL+++ G + +L++ YAIGAY + Sbjct: 2 STLLTILIDGLIYGAWLFLVAAGLTLIFGVMKVLNIAHGNLYAIGAYVAATAMGYWFADR 61 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 A+ G + L L + + Sbjct: 62 PPSFAAFAIQLGTAVVAGTALGLALDRGVLRRLRGRDEVSLALATYALLLVLDDVIQFVW 121 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 + + + + + +L + + L+RT Sbjct: 122 G---TSAYPASAPYGLLGSSEINGLRFNNYEFVLLAAAAAVGLLLWWLLQRTHTGRCLAA 178 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 I + + ++ + L+ F + + + GA A ++ ++ Sbjct: 179 IIRDPEMSAAMGINVERLYLATFMLGAVLAALGGALTAPMIQVA--PGLGAEVIVVTFAV 236 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 +++GGM S+ A ++ + F ++ + LV+ Sbjct: 237 IVIGGMGSIPGAAVGALVVGLARAATIHL--------------FPFAEVFIVYAVMALVL 282 Query: 333 LMRSHSLLR 341 +R L Sbjct: 283 AVRPEGLFP 291 >gi|294677554|ref|YP_003578169.1| ribose ABC transporter permease [Rhodobacter capsulatus SB 1003] gi|3128358|gb|AAC16210.1| ribose transport system permease protein RbsC [Rhodobacter capsulatus SB 1003] gi|294476374|gb|ADE85762.1| ribose ABC transporter, permease protein [Rhodobacter capsulatus SB 1003] Length = 357 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 87/313 (27%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + +L + + G S + + Q+ I + A +++V + G + L+ Sbjct: 49 VIVLVAAIAVFGIVAGGRFFSALNLSLILQQVSIIGILAAAQALIVLTAG-IDLSVAAIM 107 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + L G+ L + V+ A G+ G K + S F Sbjct: 108 VLMSVIAGNLAVYMGVPPVLALAVAFAGGAAAGLANGFLITKVKLPPFITTLGTWSIFFS 167 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 L + ++ + F + Y L M + Sbjct: 168 LNL------------WLSGAQSIRSQDIDKAAPLLKFWGEGFAFAGAKITYGSLLMIAVF 215 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L +TA + D+++A LS + ++ +A Sbjct: 216 LGLWYLLNKTAWGRHVHAVGDDKEAAELAGIQADRVLLSVYGLAGFICAIAAWASIGRVG 275 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 ISP F + ++V+ GG S+ I+ N + Sbjct: 276 SISPQSFYEGNLQSITAVVVGGISLFGGRGSILGALFGALIVGVFQSGLRLANVDVLWQV 335 Query: 310 LKFDCSFNMRHTT 322 + Sbjct: 336 FAIGWLIIVAVAI 348 >gi|71905893|ref|YP_283480.1| inner-membrane translocator [Dechloromonas aromatica RCB] gi|71845514|gb|AAZ45010.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Dechloromonas aromatica RCB] Length = 304 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 93/305 (30%), Gaps = 13/305 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + ++Y + A G ++ + G+ + + A S V + +I Sbjct: 8 LIGGLLSGVMYALVALGFVMIYKASGVFNFAQGAMVYLAALSVVGCMEKGAPLWLAIILA 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A+++ K + I G A + Sbjct: 68 FAIMTVFGIATEKFVLRKLVNQPPIALFMAT--------IGLAFFIEGVAPMIFGSEPRA 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L + + + ++ F L A++ L+ + T I A R + D+ + Sbjct: 120 LELGIVDEPIPWILDNWNMVISKFDLVAAGVAAVLVATLALFFQYTRIGRALRAVADDHQ 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A S+ + + V+ +AG + A F + + ++ILGG Sbjct: 180 AALSIGIPLQHIWAIVWGVAGFVALVAGMMWGARNGVQFALTFT---ALKALPVLILGGF 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 TS+ I+ +L L F +F + L +L+R Sbjct: 237 TSVPGAIVGGLIIGASEKLAEIYIPPVMQDL--FGGNFGGIEGWFPYVLALLFLLVRPEG 294 Query: 339 LLRLR 343 L + Sbjct: 295 LFGEK 299 >gi|110680755|ref|YP_683762.1| branched-chain amino acid transport system permease component, putative [Roseobacter denitrificans OCh 114] gi|109456871|gb|ABG33076.1| branched-chain amino acid transport system permease component, putative [Roseobacter denitrificans OCh 114] Length = 308 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 96/301 (31%), Gaps = 17/301 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I ++V+ A GL+I+ G +G++++ +GAY + + + I L + + Sbjct: 22 LILFSVFVLMALGLAIIFGQMGVINMAHGEFMILGAYMTYLTSTLFQAYIPGLFSIYFFV 81 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + I F + + +L W + +G T Sbjct: 82 AMIIAFIASGLLGLFVEWA--MIRHLYKRPLDTLLATWGLSLILQQVYRSIFGAREVGVT 139 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 + + + V I +V++ +S + + R++ R I N+ + Sbjct: 140 IPDWMMGSLPLTDLVEVPINGVFVMVLAVTISLGVYYLMYRSSWGLQVRAISQNRVMADA 199 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + F + G+AG+ F + + +V+ GG SL Sbjct: 200 VGINTAWTDRLTFGIGCGVAGVAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAGSLI 257 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + L ++ + ++++R L L Sbjct: 258 GTIASAFSISQAQSIMEFFLSGSMAK-------------VLTLLVVVGILMVRPQGLFSL 304 Query: 343 R 343 + Sbjct: 305 K 305 >gi|89053865|ref|YP_509316.1| inner-membrane translocator [Jannaschia sp. CCS1] gi|88863414|gb|ABD54291.1| mannose ABC transporter membrane protein / fructose ABC transporter membrane protein / ribose ABC transporter membrane protein [Jannaschia sp. CCS1] Length = 350 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 85/310 (27%), Gaps = 18/310 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + L S + + Q+ I + A S+V+ + G + L+ Sbjct: 42 LMVLISAVIVFALLLGDRFLSPFALTLILQQVQIVGIVALAQSLVILTAG-IDLSVGAVM 100 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 I + RYGL + I CG I G + Sbjct: 101 VISSVVMGQFTFRYGLPPEIAILCGLACGALCGFISGCLVAIVKLPPFI----------- 149 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + I +Y + F I Y ++ M L+ Sbjct: 150 -VTLGMWQIVLAANFLYSRNETIRSQDIEAEAGILQFFGERLEIGGAIFTYGVIFMLVLA 208 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + LR TA + D+ +A + +S + ++ AG Sbjct: 209 VVLAYALRFTAWGRHVYAVGDDPEAAELSGVNVKRTLISVYMLAGLICAFAGWALIGRIG 268 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP + + + ++VI GG S+ I+ + Sbjct: 269 SVSPTSGQLANIESITAVVIGGISLFGGRGSIMGALFGALIVGVFTLGLRLAGADPQWTN 328 Query: 310 LKFDCSFNMR 319 L Sbjct: 329 LLIGLLIIAA 338 >gi|15966339|ref|NP_386692.1| putative high-affinity branched-chain amino acid transport permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307307809|ref|ZP_07587538.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] gi|307317471|ref|ZP_07596911.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|15075610|emb|CAC47165.1| Putative high-affinity branched-chain amino acid transport permease ABC transporter [Sinorhizobium meliloti 1021] gi|306897060|gb|EFN27806.1| inner-membrane translocator [Sinorhizobium meliloti AK83] gi|306901675|gb|EFN32277.1| inner-membrane translocator [Sinorhizobium meliloti BL225C] Length = 296 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 89/305 (29%), Gaps = 22/305 (7%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +++ + Y + A GL I+ G L L++ + Y+ + I + + Sbjct: 6 QFVIDVLSLGGAYALMALGLVIIYGILRLVNFAYGELIMVAGYTMFLASGSGLPWIVMAV 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 + ++ G+I + + A LI S F N+L + V Sbjct: 66 L-AVGMAILFGIITDYAAFRPVRAKSVTAVLITSFAFSNLLQNAALLFISPRPRNVPLP- 123 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 I I + + L A + +RRT + A R N Sbjct: 124 ---------DIFSQTVSIGGAITPVRNLITIAASIALLAGVAFLMRRTTLGIAMRAAATN 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 L SAFA+S G+ G + + ++ ++G Sbjct: 175 FTMARMLGVPANLIISSAFALSGFLAGVVGILWIGRIGTV-VPGIGLEPLLVAFIATVIG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 GM SL +L + + L++L R Sbjct: 234 GMRSLPGAVVGGFLLALIDTTLNY----------TLSQDLLKFRDAFTFSLVILILLWRP 283 Query: 337 HSLLR 341 L+R Sbjct: 284 DGLIR 288 >gi|116750820|ref|YP_847507.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] gi|116699884|gb|ABK19072.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB] Length = 304 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 107/307 (34%), Gaps = 13/307 (4%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +++ + A GL+I+ G + +++ +G Y+ ++ GL L+IPV Sbjct: 8 LVAGLLIGMLFALIALGLTIIFGMMDIVNFAHGEFLMLGMYTALLTSQASGLDPLLMIPV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + A G+ Y + L+ + +L + + + + Sbjct: 68 AGAVGYALGVACY---------YGFVKFLLRGPMVAQLLGTFGLMLFLRNLALLLFGSED 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 L+ V+ + A++ L + RT A N++ Sbjct: 119 RTIHSGVLVNRAFDLGMGVVVPATKLAGAVMAVISFAAVWLLMHRTRTGKAMVATALNRQ 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + A+ + +A + +AGA +I +IV LGG Sbjct: 179 GARYMGISTERMNGLAWGIGAATVTIAGALLV--NFWSVTPYVGLLFTMIAFAIVALGGF 236 Query: 279 TSLSKIAKATAILIGVVEL--CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 S+ A I+ + E+ Y S S T + +A FL++L+R Sbjct: 237 GSVPGAFFAGLIVGLITEIPGFWDFFTYLTGSSWMAGISMTPFKYTWVYLAYFLIMLIRP 296 Query: 337 HSLLRLR 343 L + Sbjct: 297 RGLFGWK 303 >gi|158315657|ref|YP_001508165.1| inner-membrane translocator [Frankia sp. EAN1pec] gi|158111062|gb|ABW13259.1| inner-membrane translocator [Frankia sp. EAN1pec] Length = 704 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 112/301 (37%), Gaps = 10/301 (3%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 L +++F + A+ + QI + + A + G G +SL + IG Sbjct: 310 LVFAGAIVVFGIVLASVLGEGDLITYGQIFSFGVIALSYVPLAGYAGQISLCQLSMAGIG 369 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 A + + + +ISGA G ++ LP+L+ G YLA+ T + I + Sbjct: 370 A---AVWAHMGADGGIWALAATVVISGAAGALVALPALRLSGVYLALGTAAFAVILDRWI 426 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 A I + D + + + L+ Sbjct: 427 FTLPAFDLFGAKISLYDGGTVDVSGPSLFGWH-------LDSGSELMVFSAVWLALTTLA 479 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + WLRR +RD++ A+ +L ++ +K++ FA+S+ G+ GA + + ++ Sbjct: 480 VAWLRRGRFGRQLIALRDSEAAYATLGGNLLRSKVAVFAMSAGIAGLGGALYGMQQRSVT 539 Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317 + F + + I ++GG+TS+ + A L G + + N Sbjct: 540 AEQFGLVAGLPLFLIAVIGGLTSVGNGLFSGAALGGSFPVISAAGTFAQNITSVLPGLAG 599 Query: 318 M 318 + Sbjct: 600 L 600 Score = 42.2 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 28/262 (10%), Positives = 70/262 (26%), Gaps = 10/262 (3%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 IY + GL + + G+ + A + A+ Y L +GL + + + + + Sbjct: 12 LSTAAIYAIIGSGLVLTYTTTGVFNFAHGAAGMMAAFVYWQLTEGWGLPVPIALVLVLAV 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 ++ + L A +++ ++ A + Sbjct: 72 LAPGFGLLVERVVLRPVQGLGEAE--------RLVMTVAMLSGLIAVARWIWDPNEARSL 123 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 ++ ++ + + L T I R D++ Sbjct: 124 PTFFADRAAIDIGPATITWHQALTMIVAVAVAIGLRVLLYGTRIGAEMRASVDDRALVGL 183 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + A+ + + + G A S + + I G + SL Sbjct: 184 TGANPVRSNQVAWILGTQLAAIGGILIAPSVSL--DAGQLSLLIVSAYTAAIFGRLRSLP 241 Query: 283 KIAKATAILIGVVELCCGMNFY 304 ++ + G Sbjct: 242 LTFLGAVVVGCLESYLTGYLPS 263 >gi|254428813|ref|ZP_05042520.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] gi|196194982|gb|EDX89941.1| amino acid or sugar ABC transport system, permease protein, putative [Alcanivorax sp. DG881] Length = 313 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 106/317 (33%), Gaps = 24/317 (7%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + + L+ M + GL+++ +G+L+ Y +GAY + W + ++ Sbjct: 10 LNGILYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYVAY--SLGMVVGFWPALFLA 67 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ G G ++ L+ + +A L+ + ++ + + G + + Sbjct: 68 PLVVGLLGALVEKYGLRRVHENGHVAELLFTFGLAYVINELVQLIWGPVSVAYREPA--- 124 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 +R F Y IF V+L + ++ L++T + R + Sbjct: 125 ------YLREPLFTLMGTDYSIFRGGVILISALMLVALWYLLKKTRVGLMVRASLTHGNM 178 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 L + + F A G+AG + V+ + +GGM Sbjct: 179 VGHLGHNVPRLFMGVFGFGCALAGLAGVMGGPLLATEPGMAESLGPIVFVVVV--VGGMG 236 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-----------VIAL 328 SL A+ ++ + MN + L + + I L Sbjct: 237 SLLGAFYASLLIGLIQTFFVAMNASVGDLLNGIGMNVDPYGEITGITLASLAPMTPFILL 296 Query: 329 FLVILMRSHSLLRLRTP 345 L+++ R L+ P Sbjct: 297 VLILIFRPRGLMGELEP 313 >gi|253700890|ref|YP_003022079.1| inner-membrane translocator [Geobacter sp. M21] gi|251775740|gb|ACT18321.1| inner-membrane translocator [Geobacter sp. M21] Length = 291 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 101/305 (33%), Gaps = 24/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ + +GA+ ++L S + +++++ I Sbjct: 6 LVNGVALGSVYALIALGYTMVYGIITLINFAHGEIFMVGAFIGLLLVSFFKVNVFVAIVG 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+++ L + + ++ LI + L + G Sbjct: 66 AMIFCMIMGVLIELIAYRPLRKSSRLSALISAIGVSIFLSSLALMVFGADAKGFP----- 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + ++ L ++ +++T I A R ++ Sbjct: 121 -----DGAFPVHQIQVGSADISTLQLLIIGVAAALMMALEFIVQKTKIGKAMRATSEDYN 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + FA+ SA G + +S +M + + +LGG+ Sbjct: 176 TAALMGINVNRVISFTFALGSALAAAGGVLVGVLFNAVSFNM-GLMAGLKAFAAAVLGGI 234 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ G + + ++ + L LV+L++ Sbjct: 235 GSIPGAML-------------GGLLLGVSEVFGVAIGYSSYRDAIAFTILVLVLLVKPTG 281 Query: 339 LLRLR 343 LL + Sbjct: 282 LLGQK 286 >gi|170744527|ref|YP_001773182.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168198801|gb|ACA20748.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 291 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 75/297 (25%), Gaps = 26/297 (8%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 +Y + A G ++ + +++ + A+ V+ WL ++ Sbjct: 16 AVYALVALGFVLIFRATNVVNFAQGEFSMVAAFLMVVFAVDLEWPYWLSFLLAIGGMALL 75 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 G + L + +I + L G + Sbjct: 76 GALFNLGVYYPLRHRSYLPVIISTIGASIFLANTTLALYGPQPQVLPPVFET-------- 127 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 V + ++ L A + T I + +++ L Sbjct: 128 ---QGILLGPVFLDSQYLLIIAVTAVLVAFQYWFFEHTLIGKKLQATSQDKEMAALLGIP 184 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 + + F S+ G+AG A + + + I+GG ++ Sbjct: 185 VAGMIMLTFVYSAVLGGIAGILVAPVLFV--SIQMGATIALKAFAATIIGGFGDVTGAII 242 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 L + + F I L +++R L R Sbjct: 243 GGLALGIIETFGAAYISVPYKDAFAF-------------IVLVAFLILRPQGLFGER 286 >gi|148558195|ref|YP_001258041.1| branched-chain amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|148369480|gb|ABQ62352.1| branched-chain amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 315 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 105/324 (32%), Gaps = 38/324 (11%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 + + + + + LI A +I+ G G S + Y +G Sbjct: 6 ALLAIIAAVLALGAPLFAFPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65 Query: 78 AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137 AY I ++ L + + + + M++GLP L+ +G Y AIA L + ++ I Sbjct: 66 AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIAMLALPQVMAAIT 125 Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197 V + + F Y L + ++ + Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162 Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257 + L R+ IR+N++ ++ K+ A +S AF MAGA A + Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222 Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 P+ N+ +I + + GG ++ L V ++ Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268 Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340 I + + +++ L Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292 >gi|115350133|ref|YP_771972.1| inner-membrane translocator [Burkholderia ambifaria AMMD] gi|172059154|ref|YP_001806806.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] gi|115280121|gb|ABI85638.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia ambifaria AMMD] gi|171991671|gb|ACB62590.1| inner-membrane translocator [Burkholderia ambifaria MC40-6] Length = 294 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 GL W ++ ++ ++ GA G+++ L++ + L+++ ++ G Sbjct: 63 YLGLPYWAMLALAPLLVGAFGILVERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSVYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + + T++ + Sbjct: 231 ITVFAVVVIGGMGSILGSIITGLMLGVIEGFTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + +V+L+R L Sbjct: 277 IMAIVLLIRPAGLFG 291 >gi|149175856|ref|ZP_01854474.1| sugar ABC transporter permease protein [Planctomyces maris DSM 8797] gi|148845303|gb|EDL59648.1| sugar ABC transporter permease protein [Planctomyces maris DSM 8797] Length = 327 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 91/313 (29%), Gaps = 18/313 (5%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K + +L + ++ S + ++ ++ + + G++ V+ G + L+ Sbjct: 2 KKILGILILLIFVCIVTAASNEHFFSAYNMQNVIRLTSLFGIISIGVAFVI-ISGGIDLS 60 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + L + + L + SA++S G+ GL K + + Sbjct: 61 IGSVICLVGSLLPYLIMEMSVPVPLALLFSAVLSIVIGLSHGLLITKLKLQPFIVTLCG- 119 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 GI F T + + + L Sbjct: 120 ----------LLIYRGIARGITEDQTQGFGATHDSLRYLATGKINIPFLEGFRLPVPFLI 169 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 M ++ L +T + I +N+ A + A+ + S G+ G F Sbjct: 170 MIGVALIAAFLLNKTIFGRYLKAIGNNEAAARYSGINTDLTVIMAYVICSFLAGLGGVLF 229 Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNF 303 A + + P+ + I+ +LGG S+ + A++ + + Sbjct: 230 ALDINSVQPEGIGNFYELYAIAAAVLGGCSIRGGEGSILGVVIGAALMRVLRNSITMLGI 289 Query: 304 YYFNSLLKFDCSF 316 Sbjct: 290 PSQLEFAIIGAVI 302 >gi|120612461|ref|YP_972139.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120590925|gb|ABM34365.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Acidovorax citrulli AAC00-1] Length = 295 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 103/303 (33%), Gaps = 27/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + ++ Q+ + + A GL+IV G + +++L +GA++ +L G + L V Sbjct: 8 LLNVLSQVAVLALVALGLAIVFGMMDIVNLAHGEFVTLGAFTLAVLQGAGGAQAYWLALV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 A I GA + S+ + + TL+ + I+ K I GK V L Sbjct: 68 IAPIVGAVAGLALEASVIRFLYHRTLDTLLATYAVSLIIQKLLEIGFGKHPQMVYTPLA- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 Y + +V++ + A+ L RT R + N Sbjct: 127 -----------GSVSVLGASYPSYRLFVIVASIVVIAACALAFTRTRFGLHLRAVIQNPS 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L AFA +A AG A S + ++++GG+ Sbjct: 176 MSSALGIDTRHMNRLAFACGAALAAFAGVLVAPLVSVESH--LGMAYLGKAFFVIVVGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ + ++ L S ++++ +VI +R Sbjct: 234 GSVLGAVTGSVLIGSTETLLNYHIDPSMASA-------------VVLLLAIVVIRLRPRG 280 Query: 339 LLR 341 L+ Sbjct: 281 LVP 283 >gi|311108063|ref|YP_003980916.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gi|310762752|gb|ADP18201.1| inner-membrane translocator 51 [Achromobacter xylosoxidans A8] Length = 294 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 90/306 (29%), Gaps = 23/306 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I S Y + GL++ + +L+ GA ++ + Sbjct: 8 IVSGLSVGAAYALIGLGLNLTFWTTRVLNFGQGSVLMAGAMLTAVMVGAGVNVFLAVGVS 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++ + R ++ ++ + L G + D L+ Sbjct: 68 LLATAFILWVVEVVGVRPTRRVAGSMGWVVSTLGIGIFLQGVASWLFGTQAVAFPDVLFS 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 TV + V + + + L+LR + R + ++ Sbjct: 128 STDTV---------EFMGAYISLQYIAVFVISVMIVGLMELFLRHSIWGYGVRAVAHDRD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + +F VS G+AG + + P+ F I+ ++GGM Sbjct: 179 LASLMGIPVYRVVVFSFLVSGVLAGIAGILVSQVSGTVDPN-FGLHLLILAFVAAVMGGM 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S IL + +L G ++ F + L V+ +R Sbjct: 238 GSAFGSLVGGLILGILEKLVGGYVSPAAAEVVAF-------------VLLIGVLTIRPQG 284 Query: 339 LLRLRT 344 L R Sbjct: 285 LFGKRE 290 >gi|307947500|ref|ZP_07662833.1| high-affinity branched-chain amino acid transport system permease protein LivH [Roseibium sp. TrichSKD4] gi|307769318|gb|EFO28546.1| high-affinity branched-chain amino acid transport system permease protein LivH [Roseibium sp. TrichSKD4] Length = 290 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 104/310 (33%), Gaps = 27/310 (8%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y+ + IY + A G+++V L L +GA+ + + G+S + Sbjct: 6 LLNFYVIPGIVLGSIYALGAVGITLVFAILRYAHLAHGDLATLGAFIAFAVVTAVGVSPY 65 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +PV+ + + + + + + I T+I S ++ + G Sbjct: 66 VALPVAVVATAFIAVGIDKVFYEHLRERPKIITVIASLGIALMVRAVVQVVWGVDSESYV 125 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + IR + +L M ++ ++L+++ A R + Sbjct: 126 RGISRPDVYFGLRIRDREI------------FTVLAMLAFVGALYVFLKQSKWGKAMRAM 173 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 DN + + ++ A F + + M + + + + Sbjct: 174 SDNPNLALLSGIDNRVVVMLTWVIAGGLCAAASVFLGINTEL--KSMMGWHMLLPMFAAA 231 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ILGG+ + I+ EL + + + + F + L +++L Sbjct: 232 ILGGVGRVEGAVLGGLIVGVAEELSVLVLPSEYKAAMAF-------------VILLIMLL 278 Query: 334 MRSHSLLRLR 343 +R LLR + Sbjct: 279 VRPTGLLRGK 288 >gi|256061676|ref|ZP_05451815.1| hypothetical protein Bneo5_15135 [Brucella neotomae 5K33] gi|261325686|ref|ZP_05964883.1| monosaccharide-transporting ATPase [Brucella neotomae 5K33] gi|261301666|gb|EEY05163.1| monosaccharide-transporting ATPase [Brucella neotomae 5K33] Length = 334 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ +L + I ++ +Q I + A G++ V+ + L+ Sbjct: 27 IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ + ++ P S I+ G+++G+ G ++ + Sbjct: 86 ALAGIVSASFATTSAMAGIAGAPYSPFIAICVGLLVGIGCGALVGTLVSRFAVPAFVATL 145 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +L + +T G L + + + + ++ + + Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 L R+ + N A + I + S + +S G+AG +A Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253 Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 S + I+ V++ GG+ ++ I+ + M + Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGIGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312 Query: 309 LLKFDCSFNMRHTT 322 + Sbjct: 313 QVLKGALIVGAVML 326 >gi|297565970|ref|YP_003684942.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] gi|296850419|gb|ADH63434.1| inner-membrane translocator [Meiothermus silvanus DSM 9946] Length = 297 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 100/308 (32%), Gaps = 20/308 (6%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +++ S IY + A G ++ S +++ AIGA++ L + L WL Sbjct: 6 QFLISGIAVGSIYALAALGFVLIYKSSRVINFAHGQFIAIGAFAAYALATWAKLPFWLAA 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 ++ + + G + LK I+ ++++ ++L +T +G + Sbjct: 66 LLAILATAFLGFAVEKIFLKRMVGQPIISVIMVTIGLASVLDGLMYLTPFGSGNFSYPAF 125 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + + + +R+ + + R + D+ Sbjct: 126 LPQEP----------LRLAGITISYPQLLAIGFTALFLLLFGWFFQRSTLGISMRAVADD 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 Q A S+ ++ A+AV+ AG + V VILG Sbjct: 176 QMASMSVGVSVERVFALAWAVAGLTAAAAGIVVGTVSGLNQDGLIGIGL--AVFPAVILG 233 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ S+ + + +L G Y L + L +++ + Sbjct: 234 GLDSIPGAVVGGVTIGVLQQLAAGYLNQYVPG--------GGTEYVLPFVVLLVMLWFKP 285 Query: 337 HSLLRLRT 344 + L + Sbjct: 286 YGLFGIEE 293 >gi|158315052|ref|YP_001507560.1| ABC transporter related [Frankia sp. EAN1pec] gi|158110457|gb|ABW12654.1| ABC transporter related [Frankia sp. EAN1pec] Length = 959 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 112/312 (35%), Gaps = 19/312 (6%) Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90 +Q + IL Y + A ++++ G G LSL + +GA + L L Sbjct: 336 PVVVTQPSRHLLYTIILGYAICAASVTVLTGWAGQLSLGQMAFAGLGALTAAALFRGLRL 395 Query: 91 SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150 + A+ + + + ++ I + + + Sbjct: 396 D--IGDTSLAINALPFPAAVLIATVLTAAIAAVIGLGALRVHGLLLAVSTFAFAVAAEQF 453 Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210 ++ + + + + YYV+L + +++ LR++ I+ Sbjct: 454 LYRREVFHDEGSSAASFTRGTLFGIDIASQRTYYYVVLVTLAIVMAVVSRLRKSGIARTT 513 Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF--SENII 268 +RDN + + KL AFA++ A G+ GA A + + + F ++++ Sbjct: 514 IGVRDNPTTAAAYTVSATGVKLRAFALAGALAGLGGALLAGALQTVPYNDMYFRSPDSLV 573 Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328 ++SIV++GG+ S+ + +IG+ F ++ + L Sbjct: 574 LVSIVVIGGLGSVYGPLLGSLWVIGLP---------------SFMPDNDIVPLLCSSMGL 618 Query: 329 FLVILMRSHSLL 340 +++L L+ Sbjct: 619 LVLLLYFPGGLV 630 Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 30/263 (11%), Positives = 79/263 (30%), Gaps = 9/263 (3%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + L+ + A G+ +V + +++ +G+ +L RY + W+ + Sbjct: 9 LFDGATTGLVIGLLAVGIVLVNRATRIINFAVANMGLVGSALCALLVVRYNVPYWIGLAA 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G I+ + ++ + L+ + + + D Sbjct: 69 ALAAGALFGAIIHVGVIRRLFTAPRVIVLVATIGVSQLALTIV--------NAYPDLKDH 120 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + P V +L+ + ++A + L+L RT + + DN + Sbjct: 121 ADQSYPVPWSGTWSPVDGVQVTGAQLSILVVVPVVTAGLSLFLNRTVLGKTVKASADNPE 180 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSENIIVISIVILGG 277 L+ + + ++ AA + + ++ ++ Sbjct: 181 LARLQGINPKTISLAVWTAAGFLGTLSMILVAAQEKSLAQVTTLGPTTLLRALAAAVIAR 240 Query: 278 MTSLSKIAKATAILIGVVELCCG 300 M S+ A L + Sbjct: 241 MVSVRIALVAGIGLGLLQSFVQF 263 >gi|239813803|ref|YP_002942713.1| inner-membrane translocator [Variovorax paradoxus S110] gi|239800380|gb|ACS17447.1| inner-membrane translocator [Variovorax paradoxus S110] Length = 327 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 62/329 (18%), Positives = 122/329 (37%), Gaps = 29/329 (8%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 L + +L + + + L + A +I+ G G S + + Sbjct: 8 LAGIALFAVLVGCVPLATKSGVALNFVMMALYATLIAQAWNILGGFGGQFSFGHALFFGT 67 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134 GAY I + G++ W +P++ + G+ +G S + +G Y A+ TL +E+F+ Sbjct: 68 GAYIQAIAQLQGGINAWAALPLAVAGAAGVGLFVGALSFRYGLKGSYFALVTLAFAEVFR 127 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + T G G+ V R S +++L M L+ Sbjct: 128 ILALS-VNFTGGGVGLMVPLRESAANLQFASR--------------AGYLWLVLAMVVLA 172 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + WLR + +RDN+ A ++ KL+A +S+AF+G AGAF+ Sbjct: 173 LLVTCWLRNGRFGAYLQAVRDNEDAARAVGVNPFRVKLAAIGLSAAFMGAAGAFYVQVFQ 232 Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313 I + + ++ + I+GGM +L L + +L + Sbjct: 233 YIDAGIAYGPAVSVEALVAAIVGGMGTLWGPVLGAVALHLLSDLTRNLFG---------- 282 Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + L ++++ + L Sbjct: 283 -ELPGINMVIYGTVLVVIVIFLPRGVAGL 310 >gi|168213598|ref|ZP_02639223.1| ribose ABC transporter, permease protein [Clostridium perfringens CPE str. F4969] gi|170714908|gb|EDT27090.1| ribose ABC transporter, permease protein [Clostridium perfringens CPE str. F4969] Length = 311 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 94/312 (30%), Gaps = 27/312 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + V+ +++ + S I ++ Q+ + + A G++ V+ G + L+ A Sbjct: 15 LIGLVLLCIVITIVTPNFLSVSNITNVFTQVSVNAIIAIGMTFVI-LTGGIDLSVGSTLA 73 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 I + + G ++L I V+A+I A G+I GL K + Sbjct: 74 ISSAVGASIVKSTGN-VFLAIIVAAVIGIAVGLINGLLVSKGKLQ-------AFIVTLAT 125 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + I G ++ + F P I + L Sbjct: 126 MTIFRGATLVFTDGTPISKLPEAFVKIGNGKLGFMPIPVIITIIIAIIAVYAL------- 178 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +T + N+ A K + VS +AG + Sbjct: 179 ------SQTRFGRYLYALGGNEDASRLSGINTDKIKTLVYVVSGFASAIAGVIITSRIGS 232 Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 SP+ E + ++VI GG +++ I+ + MN F + Sbjct: 233 ASPNAGTGFELDAIAAVVIGGTSLAGGEGTITGTLIGALIIGVLNNGLNLMNVSPFYQSI 292 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 293 VKGLVILIAVLL 304 >gi|317121365|ref|YP_004101368.1| inner-membrane translocator [Thermaerobacter marianensis DSM 12885] gi|315591345|gb|ADU50641.1| inner-membrane translocator [Thermaerobacter marianensis DSM 12885] Length = 297 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 89/281 (31%), Gaps = 11/281 (3%) Query: 47 LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 IY ++G++++ G + +++L +GAY L +R G+ L ++ + Sbjct: 18 GIYTTMSFGMTVIYGVMKIINLAHAGFMMLGAYFVFELFNRLGVHPILGALLAFPVFFLV 77 Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166 GM + L + L +S+ + ++ + Sbjct: 78 GMAVHW---------LLVRWLPVSDQPTLPSLLLLFGLWLVLQNVGYAVWGNHDRSIYTA 128 Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226 + + + V + L L RT A R + N A + Sbjct: 129 MTLATVRVGPLTLSVVQLVVFAVAVVSLVLLQLMLTRTWFGRAVRALTQNPFAGRLVGID 188 Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286 +F + AF G+AGA A+ F + I++LGG+ S + +A Sbjct: 189 TARTARLSFGLGIAFAGLAGALLASLYSF--DPDFGRPFLLRSFVIIVLGGLESFAGVAL 246 Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327 IL V + + F +A Sbjct: 247 GALILALVETFSVQFVPAGYQMAISFSLLVVALLVLPGGVA 287 >gi|126731555|ref|ZP_01747361.1| inner-membrane translocator [Sagittula stellata E-37] gi|126708091|gb|EBA07151.1| inner-membrane translocator [Sagittula stellata E-37] Length = 306 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 111/318 (34%), Gaps = 15/318 (4%) Query: 30 LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89 + T + + + ++ + A GL+++ G +GL++L Y +GA+ + G Sbjct: 1 MSPTLIAEQVLNGLQSGIMLFLMAAGLTLIFGVMGLINLAHGSLYMVGAFCAAATAAATG 60 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 L+ A + A +I + G + +L + I G Sbjct: 61 SYALGLVGALAGAAAAGALIELAVIRRLYGR----------DHLDQVLATFALILIFSEG 110 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 + L V + + Y ++ ++ L+A++ + RT + Sbjct: 111 TRWLFGSFPLYLDVPPALSGPVTLPFGIQYPLYRLTLIGAGLALAAALFWLIGRTRLGIR 170 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 R ++++ +L I FA+ +A G+AGA + I+ Sbjct: 171 IRAGENDREMIAALGVNIDALYTLVFALGAALAGLAGALVGTLQSV--QVGMGEPVLILA 228 Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVI 326 +++GG+ S+ ++ L +F + + + + + I Sbjct: 229 FVTIVIGGIGSIRGALVGALLVGLTGTLGSVFLPEFFKLFMPPSEATQTGSALASMAIYI 288 Query: 327 ALFLVILMRSHSLLRLRT 344 + V++ + L +RT Sbjct: 289 LMAAVLVWKPTGLYGVRT 306 >gi|317154545|ref|YP_004122593.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] gi|316944796|gb|ADU63847.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2] Length = 295 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 94/306 (30%), Gaps = 22/306 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IY + A G ++ + +++ GAY L ++ + + Sbjct: 8 FINGLVVGGIYSLVALGFVVIYKATKVVNFAQGELVMAGAYICFALTVQFNIPFLWAFLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + S G+++ L+ I+ ++++ ++L + G L Sbjct: 68 TLVFSVLLGLVIERVVLRPLIGEAHISVIMVTVGMSSVLKSLVQLFWGTQIRVYPQVLP- 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + L A ++ + + A R +Q+ Sbjct: 127 ----------AEPVVIAGLPVAPVYLAAFALSAVLFAIFSVFFKYSRTGVAMRATAFDQQ 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A S+ I ++ ++ + G S + V VILGG+ Sbjct: 177 AAQSMGIGIKNIFAMSWCIACVVSAVGGVILGNINGINSHLGH---LGLKVFPAVILGGL 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A I+ + +C G I L ++++++ + Sbjct: 234 DSLLGAALGGLIIGVLENVCDGAARQLLG--------LGGFREVAAFIILVVILMIKPYG 285 Query: 339 LLRLRT 344 L + Sbjct: 286 LFGTKE 291 >gi|226314579|ref|YP_002774475.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226097529|dbj|BAH45971.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 292 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 88/307 (28%), Gaps = 27/307 (8%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 +Y+ + + IY + A G + +++L +G V L + Sbjct: 6 QYVANGLVSGGIYAIVAVGFITIYSVSKVINLAQGEFLMLGGMVTVALIGMNLPYGLAAL 65 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 +++ ++ + ++ I I I Sbjct: 66 LAILLVTLIGVLMQKYVIAYVKKANPISLIILTIGISTLIRGIASFIWG----------- 114 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 + + V+ ++L + + + + +T + N Sbjct: 115 -KDAFALEPITSNEPISLGGVMIAQQSIWILAAVLIILLLLWYLMDKTILGKKINACSVN 173 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 A + + + AFA+S A +AG A ++ I S ILG Sbjct: 174 PMAARLMGISPTKMSMLAFAISGATGAIAGIVIAPL--SVTSYDIGVLLGIKGFSAAILG 231 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ + A A +L V L G + F + L ++L++ Sbjct: 232 GLGNPLGAAVAAFLLGIVESLGAGYISSGMKDAIAF-------------LVLIGMLLIKP 278 Query: 337 HSLLRLR 343 + R Sbjct: 279 SGIFGER 285 >gi|114768853|ref|ZP_01446479.1| branched-chain amino acid ABC transporter, permease protein [alpha proteobacterium HTCC2255] gi|114549770|gb|EAU52651.1| branched-chain amino acid ABC transporter, permease protein [alpha proteobacterium HTCC2255] Length = 337 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 36/336 (10%), Positives = 83/336 (24%), Gaps = 23/336 (6%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 L S + A G+++V G L + A G ++ Sbjct: 4 LLNAFFLMSNFVFVPAIAYGSQLALGAVGVTLVYGILRFSNFAHGDIMAFGTMVVILFTW 63 Query: 87 RYGLSI---------WLLIPVSAMISGACGMIMGLPSL--KFRGDYLAIATLIMSEIFQN 135 + L +P + + + + + LI S Sbjct: 64 LFQSYGINLGPLPTAILALPFGIIATAIFLLGSDKFVYKFYREKKAIPVTYLIASVGIMF 123 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 +L G AD F+ + + + + ++ Sbjct: 124 VLNGIVRFIIGPNDQRFADGERFIIKAKAMKQYLGTAEGVSIKVSQGLTVITAVIVVMAL 183 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 L RT + R DN+ + + + + +AG + + Sbjct: 184 FWFLNKTRT--GKSMRAFSDNEDLALLSGISPDKVVSVTWILVAILATIAGTLYGLDKSF 241 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV--------ELCCGMNFYYFN 307 F + + + I+GG+ + ++ + + + Sbjct: 242 --KPFTYFMLLLPIFASAIVGGLGNPLGAIAGGFVIAFSEIMITYPYKKFVAYIVPGDWK 299 Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + I L LV+L + + + Sbjct: 300 PDGLVQLLATDYKFAVSFIILVLVLLFKPTGIFAGK 335 >gi|91788846|ref|YP_549798.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91698071|gb|ABE44900.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Polaromonas sp. JS666] Length = 287 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 97/302 (32%), Gaps = 26/302 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ M A GL+++ G +G+++L Y +GAY L + Sbjct: 10 LLNSVQYGLLLFMLAAGLTLIFGIMGVVNLAHGSFYMLGAYLA----------WSLSAQL 59 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + ++L + +L+ + I + + Sbjct: 60 GSLTLAIVVGAVLSVVFGLALEWLLFRHFYKRDHLDQVLLTFGLIYIFEELRSILWGDDV 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G T+ L+ + + Y ++ ++ L+ + + RT + R N++ Sbjct: 120 HGVTIPDLLGASIPLTENLSYPVYRLFMSGVCIALALGLYGLISRTRLGMKIRAGAFNRE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 SL I FA+ +AG A I+ +V++GG+ Sbjct: 180 MAESLGINIKRIHAVVFALGVGLAAVAGMIAAPIASV--YPNMGSQVLIMCFVVVVIGGI 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A ++ V + L+ + + V+L + Sbjct: 238 GSVRGALIAALLVGLVDTFGKVLLPSVAG--------------MLVYMLMAGVLLWKPEG 283 Query: 339 LL 340 L Sbjct: 284 LF 285 >gi|269794379|ref|YP_003313834.1| monosaccharide ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] gi|269096564|gb|ACZ21000.1| monosaccharide ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] Length = 380 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 83/298 (27%), Gaps = 29/298 (9%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYG 89 S ++ + + G++ V+ + G + L+ + A + Sbjct: 93 FASFDNALTILRLAAVLGVLCIGMTFVI-TGGGIDLSVGSVLGLATVWASTLATQTMARD 151 Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 +++ V+ + ACG+I G+ + ATL M + + Sbjct: 152 THWLVMVGVALAVGVACGLINGILIAYGKIVGFM-ATLAMMVGARGLAEIIAN------- 203 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209 V F +S + + ++ L + RT Sbjct: 204 --------RKTQVVSVPEFLDVFRASVLGVPVLVWMFALVSVAGWVLL----NRTTFGRR 251 Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269 + N +A + + +A+S G+AG A S + E + Sbjct: 252 TVAVGGNPEAARLAGIKVKRHTMYLYALSGLTAGIAGVMMLARTTAGSSTNGQMYELDAI 311 Query: 270 ISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 ++V+ GG ++ I + + N + + Sbjct: 312 AAVVVGGTLLAGGRGTIVGTVLGVLIFTTLTNVFTQNNMSTSAQAVVKGVIIVVAVLV 369 >gi|124268858|ref|YP_001022862.1| putative urea/short-chain amide transport system permease [Methylibium petroleiphilum PM1] gi|124261633|gb|ABM96627.1| putative urea/short-chain amide transport system permease protein [Methylibium petroleiphilum PM1] Length = 291 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 86/299 (28%), Gaps = 27/299 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + + GL+I++G+LGL++ +AIGAY+ + G + ++ +A+ Sbjct: 15 LVLGGTLALVGCGLTIILGTLGLVNFAHGAFFAIGAYAGWLAFEWTGSYLAAVVIGAAVT 74 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 +I +F L+ + I+ + I G Sbjct: 75 CAFGFVIERGLISRFYQRPHEDQILLTFGLGIVIVEALRAIFGGV-----------GRAM 123 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 VIY + V L L + + R ++ Sbjct: 124 PSPDWAAGAVSIGPVIYPEYRLVVFGIAALSLLVFYLLLYHSRLGLIVRAAIEDTLMVRI 183 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 L K FA+ +G+AG A + +V++GG+ S Sbjct: 184 LGLRAAQIKAVVFAIGVLAVGLAGVVMAPIVSI--NPDVGARFMVQSFVVVVIGGLGSFP 241 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 I + L + + + ++ +R L+ Sbjct: 242 GAIIGGFIAGQIQTLTAIFE--------------AAYSDVALFLTMVAILAVRPRGLMG 286 >gi|186476364|ref|YP_001857834.1| inner-membrane translocator [Burkholderia phymatum STM815] gi|184192823|gb|ACC70788.1| inner-membrane translocator [Burkholderia phymatum STM815] Length = 419 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 104/326 (31%), Gaps = 27/326 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L +L + +Q ++ + Q ++FA ++++G GLLS + Sbjct: 22 AALPWAALGVLLVVPPCVSTQSWLVAWLAQTAAMIVFALSYNLLLGGAGLLSFGHAASSG 81 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 IGA L +R+GL + LL + + G + GL + + G A+ TL + E+ Sbjct: 82 IGALIAAQLFNRFGLPLPLLPLLGGIGGALFGALYGLVATRRSGTAFAMITLGIGELVAA 141 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 G+AG+ + P Y ++ C L+ Sbjct: 142 AAWTLPDWFGGEAGVAI------------DRTAGIALPGFTFGPAREAYALIALWCALAV 189 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L RT +RDN ++ + SS F G+AG + + Sbjct: 190 IAMYALSRTPFMRLANAVRDNPVRAAAIGCYPRRVRYEVVVWSSFFAGIAGTLGLINVEL 249 Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315 +S + + V+ ++GG + S Sbjct: 250 VSTESVGMLRSGSVLVATVIGGSGAFFGPVAGA---------------VVLVFFSVVVAS 294 Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341 + + V++M + Sbjct: 295 VTRAWLLYLGLFFMAVVMMSPDGIAG 320 >gi|330819232|ref|YP_004348094.1| inner-membrane translocator [Burkholderia gladioli BSR3] gi|327371227|gb|AEA62582.1| inner-membrane translocator [Burkholderia gladioli BSR3] Length = 345 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 99/326 (30%), Gaps = 18/326 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + F + + ++ + + + S+ + + A + V+ Sbjct: 25 ARFFNPAARQKLLAFASLLLLIVFFSIASSNFLEVDNLVSILQATAVNGVLAVACTYVII 84 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + G + L+ A ++ + +G+ + L I + + G + G K + Sbjct: 85 TSG-IDLSVGTLMTFCAVMAGVVLTNWGMPLPLGILAALLFGALSGCVSGFVIAKMKVPP 143 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + G + + R + T +I + Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQDSLIGNLIPAL 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +L + ++ + L +T + N++A + K++ + S A Sbjct: 192 PIPNAVLILFLVAIGASIVLNKTLFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296 G+AG A+ + P + + E + ++VI GG S+ I+ + Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSILGTIIGAFIMSVLTN 311 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322 M+ + + Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337 >gi|126665341|ref|ZP_01736323.1| inner-membrane translocator [Marinobacter sp. ELB17] gi|126629969|gb|EBA00585.1| inner-membrane translocator [Marinobacter sp. ELB17] Length = 287 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 102/304 (33%), Gaps = 28/304 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97 + + L+ + A GL+++ G +G+L+L Y +GAY + + + Sbjct: 10 LVNGIQYGLLLFLIASGLTLIFGVMGILNLAHGSMYMVGAYLVWYFAAVTGSFTAAAALS 69 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + L + ++L L + IF ++ N G+ V D L Sbjct: 70 AVIALGLGILIERLLIQRLYNRNHLDQVLLTIGMIFVFNALQSILWGNDPHGVSVPDALS 129 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + Y I+ + L ++A++ + +T + R N+ Sbjct: 130 GSIPFTDN-----------SSYPIYRIFAALVCIGIAAALYFVVSKTRLGMLIRAGESNR 178 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + +L I FA+ ++G A R + I +V++GG Sbjct: 179 EMVEALGVNIKNLYTIVFAIGVMLAAISGIIAAPIRSIVPGMGESVL--ITCFVVVVIGG 236 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 M S+ ++ + + N ++ I + LV+L++ Sbjct: 237 MGSIKGAFVGALLVGVISTFAAVLIPSMSN--------------MIIYIFMILVLLVKPQ 282 Query: 338 SLLR 341 L Sbjct: 283 GLFS 286 >gi|33594443|ref|NP_882087.1| putative branched-chain amino acid transport permease [Bordetella pertussis Tohama I] gi|33564518|emb|CAE43833.1| putative branched-chain amino acid transport permease [Bordetella pertussis Tohama I] gi|332383854|gb|AEE68701.1| putative branched-chain amino acid transport permease [Bordetella pertussis CS] Length = 295 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 110/315 (34%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y M + GL+++ G L +++ Y +GA+ + S Sbjct: 4 LFGIPIQALLGQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMLGAFVAWMGLS 63 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 GL+ W+++ ++ ++ G G+++ L+ + L+++ ++ G Sbjct: 64 YLGLNYWIMLILAPLVVGLFGILIEKLLLRHLYKLDHLYGLLLTFGLTLLIEGLFRSFYG 123 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F++ + +V++ + + + RT + Sbjct: 124 VSGQPYPTPEALRGAT----------NLGFMVLPNYRAWVVVASITVCLTTWFVIERTRL 173 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N + + + + A G AG A + + Sbjct: 174 GALLRAGTENPRLVEAFGVNVPRMITLTYGFGVALAGFAGVLAAPVLQI--SPLMGSNLI 231 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I+V ++V++GGM S+ L + L + T++ I Sbjct: 232 IVVFAVVVIGGMGSIMGAIVTGLGLGVIEGLTKVF--------------WPEASNTVVFI 277 Query: 327 ALFLVILMRSHSLLR 341 + +V+L+R L Sbjct: 278 IMAIVLLLRPAGLFG 292 >gi|121606497|ref|YP_983826.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2] gi|120595466|gb|ABM38905.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 309 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 29/310 (9%), Positives = 90/310 (29%), Gaps = 18/310 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS-----IW 93 + + ++Y + A G ++ + G+ + A + ++ Sbjct: 8 LIGGLMAGMLYSLVALGFVLIYKASGVFNFAQGAMVLFAALAMARFSEWIPKWTGIDNLF 67 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + ++ I+ ++ + +L + + + Sbjct: 68 IANLIAFAIAAVLMFVVAWLIERLVLRHLVNQEGATLLMATLGIAYFLEGLGQTLFGSDI 127 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 ++ + ++ L + ++ ++T A R + Sbjct: 128 YKIDIGMPK-DPIFMLDTVFPGGILVNKEDVIAAAIAASLVILLSIFFQKTTTGRALRAV 186 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 D+ +A S+ + + + V+ ++G + + + + + +V Sbjct: 187 ADDHQAAQSIGIPLNRIWVIVWCVAGVVALVSGMIWGSKLGV---QFSLTTIALRALPVV 243 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ILGG+TS+ I+ +L Y ++ + + + +L Sbjct: 244 ILGGLTSVPGAILGGLIIGVGEKLSEVYLGPYVGGGIEIWFA---------YVLALVFLL 294 Query: 334 MRSHSLLRLR 343 R L + Sbjct: 295 FRPQGLFGEK 304 >gi|218529488|ref|YP_002420304.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4] gi|254560410|ref|YP_003067505.1| ABC transporter membrane protein [Methylobacterium extorquens DM4] gi|218521791|gb|ACK82376.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4] gi|254267688|emb|CAX23535.1| putative ABC transporter, membrane spanning protein [Methylobacterium extorquens DM4] Length = 294 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 100/298 (33%), Gaps = 27/298 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I+++ A GL+I+ G++G++++ +GAY+ L S +GL L +P S ++ Sbjct: 17 LSIASIWLIAAIGLTIIYGTVGVINMAHGEFIMLGAYTSYALQSSFGLPFLLCLPASFVV 76 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 G+I+ +++ + L + ++ + I Sbjct: 77 VALVGLIIERGLIRYLYNRPLDTLLATWGVSLVLMQGVRLIFG-----------SDPKYI 125 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 I F +F VL + A+ RT R + N++ S Sbjct: 126 AVPEIFQSNVEVGFASLSVFRLVVLAITAIIVAATAWLFYRTRFGMQVRAVMQNKEMAAS 185 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 ++ FA+ + G+AG+ F + + ++ +V G +L Sbjct: 186 FGINADRVYMTTFALGAGLAGIAGSLFGVLAIVLPTMGTAYVVQAFLVVVV---GGGTLM 242 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A + + + + F L+ + + + + R L Sbjct: 243 GSIAAAGLTGELQSVFAFVTNDTFAR-------------FLLYVLIVVFLRFRPRGLF 287 >gi|163855491|ref|YP_001629789.1| putative branched-chain amino acid transport permease [Bordetella petrii DSM 12804] gi|163259219|emb|CAP41519.1| putative branched-chain amino acid transport permease [Bordetella petrii] Length = 291 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 95/304 (31%), Gaps = 27/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IYV+ A GLS++ G L +++ + +GAY+ V++ ++ Sbjct: 10 LFTGLALGAIYVLLAVGLSLIFGMLTVVNFAHGAFFMLGAYAGVLVLDWTQNFWAAMLLA 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++G + G + L+ + ++ + + + A Sbjct: 70 PIAVAGIGMICERWLIRPLYGRGIDYPLLLTFGLAYMLVEAVRMVFGRAGLPFDAPEALS 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T F + + +++ L ++ L L +T+ R + Sbjct: 130 GFT-----------NLGFFDFPTYRLFIIAVTAVLLLALWLLLEKTSFGLIVRAGARDPV 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + L F + + +AG A + S I+ + ++GGM Sbjct: 179 IVRVLGVDVSRVWLLVFGLGTGIAALAGVLAAPLQGV--SPEMGTSVLIVAFVVTVVGGM 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A ++ + F M + + V+L R Sbjct: 237 GSLMGAVVAGLLVGVAESISVLF--------------FPEAAKVSMFVIMAAVLLWRPQG 282 Query: 339 LLRL 342 L Sbjct: 283 LFGR 286 >gi|114767621|ref|ZP_01446342.1| ABC sugar transporter, inner membrane subunit [Pelagibaca bermudensis HTCC2601] gi|114540362|gb|EAU43452.1| ABC sugar transporter, inner membrane subunit [Roseovarius sp. HTCC2601] Length = 356 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 100/331 (30%), Gaps = 22/331 (6%) Query: 1 MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGA--TKSQKYIDSMGIQILIYVMFAWGLSI 58 M F L+ ++ L+ ++ L++F + S + + Q+ I + A ++ Sbjct: 30 MGRFHDALHSTPALVPLIVLISALVVFGIVLGSKFFSPFALTLILQQVQIVGVLAAAQAL 89 Query: 59 VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118 ++ + G + L+ + + + RYG+ L IP+ A G + G K + Sbjct: 90 IILTAG-IDLSVGAVAVLCSVIMGQVTFRYGIPAPLAIPIGLACGTAIGAMNGWLVSKVK 148 Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178 + + I +Y + + F I Sbjct: 149 LPPFI------------VTLGMWQIVLAVNYLYSRNETLRSQEIEELAPALQFLGTKFTI 196 Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238 + ++ M + LR TA + D+ +A +S + + Sbjct: 197 GGAVITLGVVVMLGTVLILAYALRSTAWGRHVYAVGDDPEAAQLAGVDRHKTLMSVYMLV 256 Query: 239 SAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVILGGM------TSLSKIAKATAIL 291 G+AG +SP NI I+ V++GG+ S+ I+ Sbjct: 257 GFICGLAGWVMIGRFGSVSPSATTGVIGNIQAITAVVIGGISLFGGRGSILGAFFGALIV 316 Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322 + L T Sbjct: 317 GVFELGLRMAGADPQWTYLLIGVLIIAAVTV 347 >gi|121594052|ref|YP_985948.1| inner-membrane translocator [Acidovorax sp. JS42] gi|120606132|gb|ABM41872.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Acidovorax sp. JS42] Length = 445 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 105/332 (31%), Gaps = 33/332 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ L + + +M QI ++ +I++G G+LS + + Sbjct: 30 IVIWSLFALALVVAPQLFTSSLALTMLSQIGYAIIICLSYNILLGQGGMLSFGHAVYTGL 89 Query: 77 GAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 G++ V + + + L+ V + +++G + K G A+ TL + E Sbjct: 90 GSFLAVHAINMASDGRLPIPLVLMPLVGGLAGMFFAVLLGYVTTKKSGTTFAMITLGIGE 149 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + ++ + + G+ GI + I +YY++ C Sbjct: 150 LVASMALMFPEFFGGEGGIT------------TDRVYGRPVLGITFGPAIQVYYLIAAYC 197 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 F+ + + T + +RDN + + + AF ++ F G+ GA A Sbjct: 198 FVCTAAMFAFTGTPLGRILNAVRDNPERVEFIGYNTQRVRYFAFIIAGFFAGIGGALAAI 257 Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + ++ D + + LGG T Sbjct: 258 NFEIVTAADSVSVVRSGSYLLFTFLGGATFFFGPIIG---------------AVLLVLAS 302 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +++ + L Sbjct: 303 VLLSELSKAWLLYLGLVFLFMVMYAPGGIASL 334 >gi|85705939|ref|ZP_01037035.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] gi|85669527|gb|EAQ24392.1| branched-chain amino acid ABC transporter, permease protein [Roseovarius sp. 217] Length = 310 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 105/313 (33%), Gaps = 28/313 (8%) Query: 33 TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92 Y ++++ +A G +++ G GLLSL + +A G Y + GL+ Sbjct: 19 FVLPAYHHGNLARVMVLASYAMGYNLMFGYTGLLSLGHALFFAAGMYGMGLGVQYLGLTA 78 Query: 93 WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152 + + ++ +L+ G I TL+ ++ ++ + +T G G + Sbjct: 79 VPALILGLAAGAVVSGVLAALALRTAGVAFMIVTLMFAQAGYLTVLYFGALTRGDEGFVI 138 Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212 L + E Y L + + + LWL R+ Sbjct: 139 QQADRMLW-------------GIDLSLEGNRYLAALILFGVCLMLCLWLVRSPFGRVLVA 185 Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272 IR+N++ L + K + +S AGA + + +I + Sbjct: 186 IRENEERVRMLGYDVFAHKFAVMVISGTMAAAAGAAYGLLFGYVGATFASVQYSIFPLLW 245 Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332 V+LGG ++ T + +++L G+ + + +AL + Sbjct: 246 VLLGGAGTVLGPFIGTLFMFYLIDLSSGV---------------TTAYMLIAGVALVALT 290 Query: 333 LMRSHSLLRLRTP 345 L L+ Sbjct: 291 LFAPQGLMGELRR 303 >gi|168183127|ref|ZP_02617791.1| ribose transport system permease protein RbsC [Clostridium botulinum Bf] gi|182673877|gb|EDT85838.1| ribose transport system permease protein RbsC [Clostridium botulinum Bf] Length = 331 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 93/314 (29%), Gaps = 16/314 (5%) Query: 14 ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73 ++ L V+ +++ + ++ +Q I + A G++ V+ G + L+ Sbjct: 22 MILLGFVILCVVIGSLSSNFFTVTNWLNILVQCSIVGIIAVGMTFVI-ITGGIDLSVGSM 80 Query: 74 YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133 A A ++ +++ + + + I TL IF Sbjct: 81 LAFSAIVSGMMLKNGASIPVVILVALIIGTAIGFANGFFITKF--NVPAFIVTLATMSIF 138 Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193 + + + N I + + + I + L+G Sbjct: 139 RGLTLVVSDGKNQALSISKSASPDLFSKLTAFSKIGDKLGPVPIPIIIMIIIFLIG---- 194 Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253 L+ T I N++A I +L A+ ++ ++G A Sbjct: 195 ----YYVLQYTTFGRNLYAIGGNREATRFSGINIGKIELLAYTITGLLCALSGVVLNARL 250 Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 P+ E + ++VI GG ++S I+ + MN F Sbjct: 251 GAALPNAGVGYEMDAIGAVVIGGASLAGGEGTISGTILGVLIIGVLNNGLNLMNVNPFYQ 310 Query: 309 LLKFDCSFNMRHTT 322 + + Sbjct: 311 QVVKGAVILVAVLV 324 >gi|241766834|ref|ZP_04764653.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gi|241362756|gb|EER58543.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 327 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 100/298 (33%), Gaps = 18/298 (6%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 +I + A GL++V G + +L+ + A+GA+ + G M+ Sbjct: 39 LAMGMIIFIIASGLTLVFGLMDVLNFGHGVFIALGAFVATSVLGAMGDWTGSAELWRNMV 98 Query: 103 SGACGMIMGLPSLKFRGDYL--AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + M++ + G I + + + ILI + G+ I V + Sbjct: 99 AVLPAMLVAMAVAGAVGLAFERFIVRPVYGQHLKQILITMGGMIIGEEFIKVIWGPAQIP 158 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + +R + E + +L + A + L RT + R +++ Sbjct: 159 LPLPEGMRG-SWLLGDAAVEKYRVVAVLVGLAVFALLAWTLSRTKVGLLIRAGVQDREMV 217 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 SL I + F V SA G+ G + + + P M N+++ ++I+GG+ S Sbjct: 218 ESLGYRIRRLFVGVFVVGSALAGLGGVMWGMYQQSVVPQM-GAQVNVLIFIVIIIGGLGS 276 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ + + + + ++L R Sbjct: 277 TGGALIGALLVGLMANYTGFLAPKVALFSN--------------IALMVAILLWRPQG 320 >gi|221640480|ref|YP_002526742.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131] gi|221161261|gb|ACM02241.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131] Length = 363 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 86/313 (27%), Gaps = 11/313 (3%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L V + L S + + Q+ I + ++VV + G + L+ Sbjct: 48 LIVLVVSISIFGALLGQKFFSAFTLTLILQQVAIVGIVGAAQTLVVLTAG-IDLSVGAIM 106 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYG+ L + G + G + + + + + Sbjct: 107 VLSSVIMGQFTFRYGIPAPLSVLCGLAAGAGIGFVNGTLVARMKLPPFIVTLGMWQIVLA 166 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + T I + F Y + + L Sbjct: 167 ANFLYSANETIRSQDISAQAPILQFFGN-----TFRLGADEAGRGGAVFTYGAVLLILLV 221 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I LR+TA + D+ A ++ + +S +AG Sbjct: 222 LVIAYVLRQTAWGRHVYAVGDDPDAAELAGVQTRNVLVTVYTLSGLICALAGWVMIGRLG 281 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP +F+ + ++VI GG S+ + I+ M + Sbjct: 282 SVSPTAGQFANIESITAVVIGGISLFGGRGSVLGMLFGALIVGVFSLGLKLMGTDPQWTY 341 Query: 310 LKFDCSFNMRHTT 322 L Sbjct: 342 LLIGILIIAAVAV 354 >gi|315182471|gb|ADT89384.1| ribose ABC transporter, permease protein [Vibrio furnissii NCTC 11218] Length = 327 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 31/312 (9%), Positives = 96/312 (30%), Gaps = 23/312 (7%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + +++ + + ++ Q + + A G+++V+ + G + L+ A Sbjct: 29 LIALLFLIVVVSFLNPNFFTFDNLMNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + ++ + + + +P + + G I G+ K + + M+ Sbjct: 88 LCG-AFAASLIAMEVPVLVAVPTALLAGAVLGGISGIIIAKGKVQAFIATLVTMT----- 141 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + G +Y R G T + + + + ++ +++ Sbjct: 142 -------LLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWIMVVVFAAAWY 194 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + T + N+ A + K+ +A+ +AG + Sbjct: 195 LL----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLSALAGIIVTSRLSS 250 Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 P E + ++V ++GG + I+ + ++ + ++ Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 311 AKAVVILLAVLV 322 >gi|163731876|ref|ZP_02139323.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] gi|161395330|gb|EDQ19652.1| branched-chain amino acid ABC transporter, permease protein, putative [Roseobacter litoralis Och 149] Length = 318 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 29/284 (10%), Positives = 73/284 (25%), Gaps = 11/284 (3%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---------LLIPVS 99 + A G++++ G L + A GA V+ + + L +P Sbjct: 7 LALGALGVTLIYGILRFSNFAHGDTMAFGAMVTVLFTWLFQSWGFSLGPLPTALLALPFG 66 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 + ++ +F + A +++ I + Sbjct: 67 ILACMGLLLVTDRMVYRFYREQKAKPVILVIVSLGVTFILNGIVRFIIGPDDQRFTDGER 126 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 R + + +L + +L RT + R DN+ Sbjct: 127 FIISARTFREMTGLREGLAIKTTQGITVLVAVICVILLFWFLNRTRTGKSMRAYSDNEDL 186 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + + + +AG + + F + + + I+GG+ Sbjct: 187 ALLSGINPERVVMITWLIVAGLATIAGVLYGLDKSF--KPFTYFQLLLPIFASAIVGGLG 244 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323 + ++ L+ + + L Sbjct: 245 NPLGAIAGGFVIAFSEVTVTYAWKKVLTYLMPENLEPSGLVQLL 288 >gi|91789238|ref|YP_550190.1| inner-membrane translocator [Polaromonas sp. JS666] gi|91698463|gb|ABE45292.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 326 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 103/289 (35%), Gaps = 12/289 (4%) Query: 23 PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82 P+L L + + +I I +FA L +++G G++SL + +GAY+ Sbjct: 24 PVLWLLAFASPLLLSSHALIINEIAIVALFAISLDLILGFTGIVSLGHAAFFGLGAYAAA 83 Query: 83 ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142 + + + V+ +S G L ++ + TL M I + K Sbjct: 84 LFAKLVMPDPLVGLAVAIAVSTLMGAACSLTIMRGSDLTRLMVTLGMGLILLELANKLDW 143 Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202 +T G G+ LG F + Y L + + + L Sbjct: 144 LTGGADGLQGVLMGPLLGR------------FEFDLSGRTAAYYSLCVGLILFLLARRLV 191 Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262 + IRDN+ ++ + + VS+ G AG A + S D+F Sbjct: 192 HSPFGATLMAIRDNRLRAMAIGIPVHARLAVIYTVSAGVAGAAGGLLAQTTGFASLDVFD 251 Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311 F + V+ ++++GG+ L + + ++ + Y+ + Sbjct: 252 FHRSADVMLVLVVGGVGWLYGGIAGAVVFKLMQDILSAITPQYWTFWIG 300 >gi|91785753|ref|YP_560959.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91689707|gb|ABE32907.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Burkholderia xenovorans LB400] Length = 294 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 106/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W+++ ++ +I G GM + L++ + L+++ ++ G Sbjct: 63 YFGLPYWVMLVLAPLIVGLFGMAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLVVCFATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGINVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + L + T++ + Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVIEGLTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFG 291 >gi|148253468|ref|YP_001238053.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146405641|gb|ABQ34147.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 297 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 100/295 (33%), Gaps = 16/295 (5%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G++G++++ +GAY V+ G +G I++ IP++ +++ G+++ Sbjct: 18 VALGLAITYGAMGVINMAHGEMVMVGAYVTVLSGLWFGTDIFIAIPLAFIVTALLGLLIE 77 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 ++ L L I I + L V Sbjct: 78 RVVVRKLYGRLLDTLLATWGIAILIQQAVRLEFGLSFLGIHIQGLGPGLQNVSVPDILQG 137 Query: 172 -FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 F + + +++L L+ + + RT R I N K + + Sbjct: 138 TFRFAGADINRYRAFIILVTAMLAIATWFVIYRTVAGTQVRAIIRNPKMAAACGIDVTRV 197 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 FA S G+AG + + S + +V++GG+ SL + I Sbjct: 198 NALTFAFGSGLAGVAGVMMSGFKTV--FPDMGTSMVVDGFLVVVMGGVGSLLGSVLSAGI 255 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L + L + F + +I+++ L L+ Sbjct: 256 LGEINGLVAAATNDILARAVVFG-------------VVIAIIVLKPKGLFALKGR 297 >gi|311693990|gb|ADP96863.1| inner-membrane translocator [marine bacterium HP15] Length = 287 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 106/303 (34%), Gaps = 28/303 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL++V+G +G+L+L Y +GAY G I Sbjct: 10 LINGLQYGLLLFLIASGLTLVLGVMGILNLAHGSLYMVGAYLMWYFVGVTGSFTVSAILS 69 Query: 99 SAMISGACGMIMGLPSLKF-RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + + +I L + + ++L L + IF ++ N G+ V + L Sbjct: 70 AVIALALGILIERLLIQRLYKRNHLDQVLLTIGMIFVFNSVQSILWGNDPYGVSVPEALS 129 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + Y ++ + L ++A++ L + +T + R N+ Sbjct: 130 GSVPFTDN-----------SSYPVYRIFAALICIAIAAALYLVVSKTRLGMLIRAGESNR 178 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 + +L I FA+ ++G A R + I +V++GG Sbjct: 179 EMVEALGVNIKSLYTIVFAIGVMLAAISGIIAAPMRSIVPGMGESVL--ITCFVVVVIGG 236 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 M S+ + + + + N ++ + + LV+L++ Sbjct: 237 MGSIKGAFVSALWVGVITTFAAVLTPTMSN--------------MVIYLFMILVLLVKPQ 282 Query: 338 SLL 340 L Sbjct: 283 GLF 285 >gi|295696245|ref|YP_003589483.1| inner-membrane translocator [Bacillus tusciae DSM 2912] gi|295411847|gb|ADG06339.1| inner-membrane translocator [Bacillus tusciae DSM 2912] Length = 289 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 96/303 (31%), Gaps = 27/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S IY + A G V GL++ +GA S V+ + + W+ + Sbjct: 8 VLSGLALGGIYALIAVGFVTVFKVCGLINFAQGDFATVGALSLVMFFASGLPT-WMALFG 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + +++ G ++ L D +I + +L + G V+ L Sbjct: 67 AIVVAAIVGGVLHRVFLDKLRDQAETVQIIATIGLSIVLQSVGQLLMGSQPRAVSPFLPG 126 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 +L+ + L + + ++ A R + N+ Sbjct: 127 QPYHFMG-----------GAVPRQDVVILVTVAILFVLLFFFFEKSYAGAALRAVMLNRD 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + L + +F + +A G+ GA A + + + ++GG+ Sbjct: 176 SARLLGISARSMATFSFVIGAAVAGLGGAVIAPV--TLVSYDMGLTLGLKGFVAAVVGGL 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 + + IL + + G + + F + L +++L R + Sbjct: 234 SDVPGAVAGAFILGMLESVGAGFVSSAYKEAIAF-------------VVLIVILLWRPNG 280 Query: 339 LLR 341 L Sbjct: 281 LFG 283 >gi|256830053|ref|YP_003158781.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] gi|256579229|gb|ACU90365.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028] Length = 295 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 106/306 (34%), Gaps = 22/306 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G I+ + +++ +GAY L +Y L + + Sbjct: 8 IINGLVVGSIYSLVALGFVIIFKATKVVNFAQGELVMVGAYVCFSLTVQYQLPFLVSFLL 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + S A +++ L+ I+ ++++ ++L + +T G L Sbjct: 68 TLVFSIALAILVERLILRPLIGEPIISVIMVTIGLSSMLKSFVQMTWGTQIQVFPPILPQ 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + L + ++F + + L+ + +++ A R +Q+ Sbjct: 128 EPYMLLGLPIAPVYVAAFGLSILLF-----------GVFTLFFKYSSLGIAMRATAFDQQ 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A S+ I ++ +++ + G + + V VILGG+ Sbjct: 177 AAQSMGIGIKSIFALSWCIAAVVSSIGGIILGNIN---GINAQLGHLGLKVFPAVILGGL 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A I+ + +C G F L ++++++ + Sbjct: 234 DSLLGAALGGLIIGVLENICEGAAKDLFG--------LGGFKEVASFAILVIILMIKPYG 285 Query: 339 LLRLRT 344 L + Sbjct: 286 LFGTKE 291 >gi|254512091|ref|ZP_05124158.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] gi|221535802|gb|EEE38790.1| branched-chain amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] Length = 291 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 102/305 (33%), Gaps = 29/305 (9%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96 + S +Y + A G ++ + ++ +GA+ + GL L + Sbjct: 7 LISGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVTIGLTNTEYIGLPFLLAL 66 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 P+S I A G ++ ++ A +I++ ++ + G Sbjct: 67 PLSLGIMAALGYLVDRLIIRRLFGESQTAVVILTIALGFVIRFVAGLIWG---------- 116 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 T+++ + ++ + V++ L+ + ++ +T + A + N Sbjct: 117 -HEPQTLQNPLAGKEVRFGGLVLGMEDVAVIVVTVLLTWGLYVFFSKTRLGLAMQGASQN 175 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 Q A + + + + +A++ G+AG FAA S D I + ++G Sbjct: 176 QLAAYYMGIPVKRVQGLIWALAGIVAGIAGILFAAK---GSVDPTTGLLGIKAFAAAVIG 232 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G SL I+ + ++ + L V++ R Sbjct: 233 GFGSLPGALAGGLIVGVIEPFASRYIAAGYSQIAP-------------YALLLAVLIFRP 279 Query: 337 HSLLR 341 H L Sbjct: 280 HGLFS 284 >gi|222111215|ref|YP_002553479.1| inner-membrane translocator [Acidovorax ebreus TPSY] gi|221730659|gb|ACM33479.1| inner-membrane translocator [Acidovorax ebreus TPSY] Length = 445 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 105/332 (31%), Gaps = 33/332 (9%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ L + + +M QI ++ +I++G G+LS + + Sbjct: 30 IVIWSLFALALVVAPQLFTSSLALTMLSQIGYAIIICLSYNILLGQGGMLSFGHAVYTGL 89 Query: 77 GAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131 G++ V + + + L+ V + +++G + K G A+ TL + E Sbjct: 90 GSFLAVHAINMASEGRLPIPLVLMPLVGGLAGMFFAVLLGYVTTKKSGTTFAMITLGIGE 149 Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191 + ++ + + G+ GI + I +YY++ C Sbjct: 150 LVASMALMFPEFFGGEGGIT------------TDRVYGQPVLGITFGPAIQVYYLISAYC 197 Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251 F+ + + T + +RDN + + + AF ++ F G+ GA A Sbjct: 198 FVCTAAMFAFTGTPLGRILNAVRDNPERVEFIGYNTQRVRYFAFIIAGFFAGIGGALAAI 257 Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 + + ++ D + + LGG T Sbjct: 258 NFEIVTAADSVSVVRSGSYLLFTFLGGATFFFGPIIG---------------AVLLVLAS 302 Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + + +++ + L Sbjct: 303 VLLSELSKAWLLYLGLVFLFMVMYAPGGIASL 334 >gi|188580549|ref|YP_001923994.1| inner-membrane translocator [Methylobacterium populi BJ001] gi|179344047|gb|ACB79459.1| inner-membrane translocator [Methylobacterium populi BJ001] Length = 294 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 99/298 (33%), Gaps = 27/298 (9%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I+++ A GL+I+ G++G++++ +GAY+ L S GL L +P S ++ Sbjct: 17 LSIASIWLIAAIGLTIIYGTVGVINMAHGEFIMLGAYTSYALQSSLGLPFLLCLPASFVV 76 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 G+++ +++ + L + ++ + I Sbjct: 77 VALVGLVIERGLIRYLYNRPLDTLLATWGVSLVLMQGVRLIFG-----------SDPKYI 125 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 I F +F VL + A+ RT R + N++ S Sbjct: 126 AVPEIFQSNVEVGFASLSVFRLVVLGITALIVAATAWLFYRTRFGMQVRAVMQNKEMAAS 185 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 ++ FA+ + G+AG+ F + + ++ +V G +L Sbjct: 186 FGINADRVYMTTFALGAGLAGVAGSLFGVLAIVLPTMGTAYVVQAFLVVVV---GGGTLM 242 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 A + + + + F L+ + + + + R L Sbjct: 243 GSVAAAGLTGELQSVFAFVTNDTFAR-------------FLLYVLIVVFLRFRPRGLF 287 >gi|170694302|ref|ZP_02885456.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|307731477|ref|YP_003908701.1| inner-membrane translocator [Burkholderia sp. CCGE1003] gi|170140725|gb|EDT08899.1| inner-membrane translocator [Burkholderia graminis C4D1M] gi|307586012|gb|ADN59410.1| inner-membrane translocator [Burkholderia sp. CCGE1003] Length = 294 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 106/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGFS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +G+ W ++ ++ ++ G G+++ L++ + L+++ ++ G Sbjct: 63 YFGVPYWPMLIIAPLLVGLFGVLIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLIVCFATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGINVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + L + T++ + Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVIEGLTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFG 291 >gi|167470525|ref|ZP_02335229.1| leucine/isoleucine/valine transporter permease subunit [Yersinia pestis FV-1] Length = 282 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 9/189 (4%) Query: 19 AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78 + +++ + + LIYVM GL++VVG GLL L YAIGA Sbjct: 91 LLAAVVIIAAVAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150 Query: 79 YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138 Y+Y +L YGL W +P++ + + G ++G P L+ RGDYLAI TL EI + +L+ Sbjct: 151 YTYALLNHYYGLGFWESLPLAGITAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210 Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189 IT G GI + G + FF IF+Y V L Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSHRIIFLYLVALL 270 Query: 190 MCFLSASII 198 + L+ +I Sbjct: 271 LVILTLFVI 279 >gi|291297058|ref|YP_003508456.1| inner-membrane translocator [Meiothermus ruber DSM 1279] gi|290472017|gb|ADD29436.1| inner-membrane translocator [Meiothermus ruber DSM 1279] Length = 318 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 104/287 (36%), Gaps = 37/287 (12%) Query: 61 GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120 G G+ SL +GAY+ + + GL + L + ++ + + ++ GL + G Sbjct: 60 GHGGVPSLGQAAFLGLGAYTVGL-ALKAGLPLGLALLLAPLAAALLALLTGLLVFRTHGI 118 Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 ++ + TL ++ + KW +T G G+ S I+ Sbjct: 119 FILMLTLAFGQMVYSAAHKWTGLTGGDDGLS---------------------LSGLSIHP 157 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 + ++ V +G+ + + L +T IR N++ SL + KLS + +++A Sbjct: 158 VLLHLVAVGVLLAAVGGLRALLQTPYGKTLEAIRQNEEKIRSLGVPTFYYKLSLYLLTAA 217 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AG+ A R ISP + + ++ +V+LGG L + V Sbjct: 218 LTGLAGSGLALHRSFISPHDLFWLTSATLMVMVLLGGSRGLWGAVFGALLYTFVQAWVSS 277 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + + L L +L L L Sbjct: 278 FTDLWG---------------LFVGSLLVLTVLFAREGLWPLLERRL 309 >gi|13488197|ref|NP_085620.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14027869|dbj|BAB54461.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 311 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 100/309 (32%), Gaps = 17/309 (5%) Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77 +A + + L L +G YI ++ + + + + ++G S V IG Sbjct: 9 IATIIVVGLALVVGGLVGTPYILAVLVIFGMVSILVLSYRTIT-TMGGWSFAHVALMGIG 67 Query: 78 AYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136 YS I L + + + + I+ P L+ R Y ++T E + Sbjct: 68 GYSVAIFSKAPFEIPVLAAVALGGVFAAFFAAILSWPVLRTRQYYFFLSTFAAGEALRQC 127 Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196 I+ K +T G AGI R L + V+ +F + Sbjct: 128 YIQIKEVTGGTAGIAFIARPGVLPDPSSAFQFLCLVAVILVLLGLFYAALDA-------- 179 Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 + + + +++ SL + AF + S G+AG FA+ + Sbjct: 180 -------SDTGKKIKAVGEDEALSSSLGIDAWALRALAFILGSFGAGIAGGLFASYNGIM 232 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316 SP +++ ++GG T S L + E+ + + + Sbjct: 233 SPSDINAMLMFKIVAACVIGGTTRFSGPLLGLLFLTLIEEIFRFVPEFVPMIWGMLVIAA 292 Query: 317 NMRHTTLMV 325 + Sbjct: 293 VIFSQRTGG 301 >gi|220914904|ref|YP_002490212.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|220924323|ref|YP_002499625.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219948930|gb|ACL59322.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] gi|219952655|gb|ACL63045.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060] Length = 331 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 121/321 (37%), Gaps = 29/321 (9%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 + A +++L + +FA ++++G GLLS + + +Y Sbjct: 31 LVFIGIAVALAVLPLILYPVFLMKVLCFALFALAFNLLLGYGGLLSFGHAAYFGMASYIA 90 Query: 82 VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141 +GLS L I + + G++ G +++ +G Y ++ TL ++++ ++ Sbjct: 91 AYGAKVWGLSPELAILAGTLTAALLGLVFGALAIRRQGIYFSMITLALAQMVFFFSLQAA 150 Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201 T G+ GI R F + + +Y ++ + FL +I + Sbjct: 151 -FTGGEDGIQAVPR-------------GQLFGVISLADDRVLYALVALIFFLGLLLIYRI 196 Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261 + + IRDN+ SL KL+ F +S+ G+AGA A S Sbjct: 197 IHSPFGQVLKAIRDNEPRAVSLGYRASQYKLAVFVLSTTLAGLAGATKAIVFQLASLTDV 256 Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 +S + V+ + ++GGM ++ +++ + F T Sbjct: 257 HWSMSGEVVLMTLVGGMGTVFGPIIGAFVIVAMENYLA---------------QFGAWVT 301 Query: 322 TLMVIALFLVILMRSHSLLRL 342 + + + +++ ++ L Sbjct: 302 IIQGVVFVICVILFREGIVGL 322 >gi|149375496|ref|ZP_01893266.1| inner-membrane translocator [Marinobacter algicola DG893] gi|149360201|gb|EDM48655.1| inner-membrane translocator [Marinobacter algicola DG893] Length = 287 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 92/302 (30%), Gaps = 26/302 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + L+ + A GL++V G +G+L+L Y +GAY + G I Sbjct: 10 LINGLQYGLLLFLIASGLTLVFGVMGILNLAHGSMYMVGAYLVWYFVAVTGSFTVSAILS 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G +I + + L+ + + Sbjct: 70 AVIALGLGIVIERVLIQRLYNRNHLDQVLLTIGMIFVFNSLQSILWGNDPYGVAVPDALS 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 Y ++ + ++A++ + +T + R N++ Sbjct: 130 GSVPFTDN----------SSYPVYRIFAAFICIAIAAALYFVVSKTRLGMLIRAGESNRE 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 +L I FA+ ++G A R + I +V++GGM Sbjct: 180 MVEALGVNIKSLYTIVFAIGVMLAAVSGIIAAPMRSIVPGMGESVL--ITCFVVVVIGGM 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ ++ + + N ++ I + LV+L++ Sbjct: 238 GSIKGAFVGALLVGVISTFAAVLMPTMSN--------------MIIYIFMILVLLVKPQG 283 Query: 339 LL 340 L Sbjct: 284 LF 285 >gi|90420825|ref|ZP_01228731.1| permease protein, ABC-type sugar transporter [Aurantimonas manganoxydans SI85-9A1] gi|90335116|gb|EAS48877.1| permease protein, ABC-type sugar transporter [Aurantimonas manganoxydans SI85-9A1] Length = 356 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 89/312 (28%), Gaps = 18/312 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 ++ ++ + + S + + Q+ I + A S+V+ + G + L+ Sbjct: 49 VIVLLLSVAVFGVVSNNFFSAFNLSLIMQQVAIVGILAAAQSLVILTAG-IDLSVAAVMV 107 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + L GL + L I ++ G++ G+ K R + Sbjct: 108 MISVIMGRLSVEAGLPVPLAILSGFVVGTLTGLLNGILVTKVRLPPFITTLGTWNVFLAL 167 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 T + L F F I + + ++ M + Sbjct: 168 NYYFSNRETIRSQTLDAEAPL------------LKLFGERFNIGGAVLTWGVVLMVVIFV 215 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 + L RTA I D+++A +S + VS +A Sbjct: 216 VLWFVLNRTAWGRHVYAIGDDKEAAELSGIRTDRTLISVYMVSGFICALAAWASIGRVGS 275 Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 +SP F + + ++VI GG S+ I+ L Sbjct: 276 VSPTSFFEANLESITAVVIGGISLFGGRGSIIGPMIGALIVGVFNSGLRLAGVDVLWQLF 335 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 336 ATGWLIILAVAI 347 >gi|323699118|ref|ZP_08111030.1| inner-membrane translocator [Desulfovibrio sp. ND132] gi|323459050|gb|EGB14915.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132] Length = 295 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 96/306 (31%), Gaps = 22/306 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + IY + A G ++ + +++ +GAY L ++ + + Sbjct: 8 IVNGLVVGSIYSLVALGFVVIYKATKVVNFAQGELVMVGAYVCFALTVQFHIPFIWAFLI 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + S G+ + L+ I+ ++++ ++L + G L Sbjct: 68 TLVFSVLLGLAIERMVLRPLIGEEHISVIMVTIGMSSVLKSLVQLFWGTQIRVYPQVLPT 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + L A + + + A R +Q+ Sbjct: 128 EPVM-----------IAGLPVAPVYIAAFILSAVLFAVFSAFFKYSRTGVAMRATAFDQQ 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A S+ I ++ ++ + G + + V VILGG+ Sbjct: 177 AAQSMGIGIKNIFAMSWCIACIVSAVGGVILGNIN---GINAHIGHLGLKVFPAVILGGL 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A I+ + +C G + I L ++++++ + Sbjct: 234 DSLLGAALGGLIIGVLENVCDGAARQFLG--------LGGFREVAAFIVLVVILMIKPYG 285 Query: 339 LLRLRT 344 L + Sbjct: 286 LFGTKE 291 >gi|260427027|ref|ZP_05781006.1| ribose transport system permease protein RbsC [Citreicella sp. SE45] gi|260421519|gb|EEX14770.1| ribose transport system permease protein RbsC [Citreicella sp. SE45] Length = 361 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 87/313 (27%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + +L + + S + + Q+ I + A S++V + G + L+ Sbjct: 53 VIVLLGAVAVFGVVSGSKFFSAFNLTLIMQQVSIIGILAAAQSLIVLTAG-IDLSVAAIM 111 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + L G+ +L + ++ + A GM G + + Sbjct: 112 VLMSVIAGNLAVYSGVPAFLALIIAFVGGTAAGMFNGFLVTRVKLPPFITT--------- 162 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + I + + F + I + Y + M + Sbjct: 163 ---LGTWSIFYALNLWLSGAQSIRSQDIDSAAPLLKVFGETIAIGPARITYGSILMVLVF 219 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L RTA + D+ +A +S +A++ G+A Sbjct: 220 LVLWYMLNRTAWGRHVYAVGDDAEAAELAGIRTGRTLMSVYALAGFVCGIAAWASIGRVG 279 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 ISP F + ++VI GG S+ I+ + Sbjct: 280 SISPQAFYEGNLQSITAVVIGGISLFGGRGSILGALFGALIVGVFQSGLRLAGVDVLWQV 339 Query: 310 LKFDCSFNMRHTT 322 + Sbjct: 340 FAIGWLIIIAVAI 352 >gi|118592796|ref|ZP_01550185.1| ABC transporter permease protein [Stappia aggregata IAM 12614] gi|118434566|gb|EAV41218.1| ABC transporter permease protein [Stappia aggregata IAM 12614] Length = 287 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 97/304 (31%), Gaps = 25/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + +Y +FA GLS++ G + L+++ + A+ + + + GLS L + + Sbjct: 7 ILQGILLGGLYALFAAGLSLIFGVMRLVNIAHGDFIVLAAFLGLTITTTLGLSPLLALIL 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G + L + L+++ I+ G+ Sbjct: 67 VVPVMAGIGYGLQRLVLNQTLGDDILPPLLVTFGLSVIIQN---------GLLEIYSADP 117 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + +L + + + + A + R+A+ A+R + D Q Sbjct: 118 QKISAGALETASVALPGDLNIGVLPLLMFGVAVAVIAGLQWIFYRSALGRAFRAVSDKQD 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + A A+S A +G+AG F I VI+GG+ Sbjct: 178 IAQLMGLNKAHIFGLAMALSLAVVGLAGVFLGIRTSF--DPSIGPGRLIFGFEAVIIGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 +L IL + +N + IA +V+ +R Sbjct: 236 GNLWGTLIGGIILGVSQNIGAQINPGW--------------QLLAGHIAFLIVLAVRPRG 281 Query: 339 LLRL 342 L Sbjct: 282 LFPR 285 >gi|170290866|ref|YP_001737682.1| ABC-type branched-chain amino acid transport system, permease component [Candidatus Korarchaeum cryptofilum OPF8] gi|170174946|gb|ACB07999.1| ABC-type branched-chain amino acid transport system, permease component [Candidatus Korarchaeum cryptofilum OPF8] Length = 304 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 91/304 (29%), Gaps = 17/304 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + IY GL+++ G + L + Y +GA+ L S G ++L P++A+ Sbjct: 15 LMMGGIYAAIGVGLTMIFGVMKLSNFAHGEFYMLGAFLTYTLVSALGSDPYILAPLAAIA 74 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 G G+I+ L A + FQ++ I + +A ++ Sbjct: 75 VGFLGIILNKLVFLSLYKELREAKGAAAFFFQDLRFIMLTIGLSILFVDLALVIWGPIPI 134 Query: 163 VRSLIRFFRFP--SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + + + + + ++LR T A R N A Sbjct: 135 AIPSVLTSHIIKLPGGFSFSLARIMTFIIALASLIILYMFLRVTKTGKAIRATAQNPSAA 194 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 + +S+A +AG + +VI GGM + Sbjct: 195 ALVGIDTYRIYDVTMFISTALAALAGGILGPIYNV--YPTMGLDVVAKAFVVVITGGMGN 252 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + A ++ L + + + LV+ R +L Sbjct: 253 IIGSILAGFLIGLAEGLGGVFLG-------------TEYRQVVAFVIMILVLWFRPQGIL 299 Query: 341 RLRT 344 R Sbjct: 300 GGRR 303 >gi|222839546|gb|EEE77883.1| predicted protein [Populus trichocarpa] Length = 419 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 73/212 (34%), Gaps = 8/212 (3%) Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183 + TL ++ FQ + + T G+ G+ + + I Sbjct: 1 MITLAVAAAFQTLASQLSEWTGGEDGLSFKLPEWLSPSFEPFENEVLGVLIDG---RIIT 57 Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243 YY+L + + +L + + + IR+N+ ++ ++ + + +S+ F Sbjct: 58 YYLLFVLAVVLVLALLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTLSSVLSALFAC 117 Query: 244 MAGAFFAASRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELC 298 +AGA A F + + IV++GGM ++ A + + + + +L Sbjct: 118 VAGAMLALWLRYNGPDTSLSFEIMMDCLLIVVIGGMGTIYGAAIGSVLFLIAQSYLQDLL 177 Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330 + + R + + L Sbjct: 178 RVASEAAHSLPWLAALLSPDRWLLWLGVLFVL 209 >gi|222084755|ref|YP_002543284.1| fructose ABC transporter [Agrobacterium radiobacter K84] gi|221722203|gb|ACM25359.1| fructose ABC transporter [Agrobacterium radiobacter K84] Length = 354 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 91/314 (28%), Gaps = 19/314 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + F G S + + QI I + A ++V+ + G + L+ + Sbjct: 45 LIVLVMAIIIFGFAIGGRFFSAYTLTLILQQIAIVGILAAAQTLVILTAG-IDLSIGVIM 103 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 I + + YGL + I G CG++ G + Sbjct: 104 VISSVVMGNVAVTYGLPTPVAIIAGMAAGGLCGLLNGFLVANMKLPPF------------ 151 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + I IY A+ F SF + + ++ M L Sbjct: 152 IVTLGTWNIVMATNFIYSANETIRDTDVDEKAPLLHLFAVSFRLGGAVLTLGVIAMVLLV 211 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L TA + D+ +A L+ + VS A Sbjct: 212 VGLWYILNHTAWGRHVYAVGDDPEAAKLSGIQTKKVLLAVYGVSGLIAAFAAWVSIGRNG 271 Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308 +SP N+ I+ ++GG+ S+ I+ V + Sbjct: 272 SVSPSSAVTDFNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 331 Query: 309 LLKFDCSFNMRHTT 322 +L Sbjct: 332 VLLTGVLIIGAVAI 345 >gi|170738889|ref|YP_001767544.1| inner-membrane translocator [Methylobacterium sp. 4-46] gi|168193163|gb|ACA15110.1| inner-membrane translocator [Methylobacterium sp. 4-46] Length = 296 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 109/303 (35%), Gaps = 27/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S ++VM A GLSI+ G LG+++ + IGAY+ + S WL + + Sbjct: 15 LFSGVALGAVFVMLALGLSIIFGMLGIVNFAHGNFFMIGAYA-GVFVLERTGSFWLALLL 73 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ GA G+++ ++ L+++ +L++ I G G+ VA Sbjct: 74 GPLLVGALGLVVERLLIRPLAGRSPDDALLLTFGLGYVLVEGVRILFGSDGLPVATPEAL 133 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G ++ ++ +V+ + + + L RT + R + + Sbjct: 134 SGV----------ADLGIGLFPVYRLFVIGVVALVLLLLWWALERTRLGLIVRAGARDPE 183 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L I L F + A + G A R + ++ ++GGM Sbjct: 184 ILRVLGVDIQRLWLWVFGLGIALAALGGVLAAPMRSV--NPEMGSAVLSEAFAVTVIGGM 241 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A ++ VV L + N + + LV+L R H Sbjct: 242 GSLLGSVAAGLLVGIVVSLTALVAPEMAN--------------IAVFAFMALVLLARPHG 287 Query: 339 LLR 341 L Sbjct: 288 LFG 290 >gi|319785007|ref|YP_004144483.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170895|gb|ADV14433.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 348 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 117/315 (37%), Gaps = 19/315 (6%) Query: 6 LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65 ++ + + V ++ + S I S+ + Y+ A +++ G GL Sbjct: 17 VQRQTRSGRIAMTLAVLAMIAVAVMPWWASTGTIRSVLVL-CCYIAVAQMWNLLAGYAGL 75 Query: 66 LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125 +S+ Y+ +L YG++ ++ + +S ++ A + + L + G Y +I Sbjct: 76 VSVGQHAFMGAAGYALFVLAQTYGINPFVAVFLSLLVPAALAVPIYLLLHRLDGPYFSIG 135 Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185 T +++E+F+ + +G + S + M Sbjct: 136 TWVVAEVFRLTASNLPLVNSGAGMSLRVMK-----------------DYSAFERNVAMSL 178 Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245 + GM ++ WL R+ A +RDN A S ++ + + S+ G+A Sbjct: 179 LCAGMLLVTLGGSYWLLRSRFGLALIAMRDNPVAAASQGVNVVKLRFLIYVASAVGCGLA 238 Query: 246 GAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304 GA + ++ RI+P F + I IV++GG+ S+ + + I Sbjct: 239 GAIYFMAQLRITPGSAFDPMWANVAIFIVMVGGIGSIEGVLIGSLIFFIADRWFGEYGAT 298 Query: 305 YFNSLLKFDCSFNMR 319 YF L + Sbjct: 299 YFVVLGLMTLLVALY 313 >gi|300311880|ref|YP_003775972.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300074665|gb|ADJ64064.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 304 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 96/304 (31%), Gaps = 13/304 (4%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 S + L+Y + A G ++ + G+ + A + V L + +W I + Sbjct: 9 LSGLLSGLMYSLVALGFVLIYKASGVFNFAQGAMVYFAALAVVGLMEKGMP-MWAAIIGA 67 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159 ++ G+ L+ + I + + L P+ G + Sbjct: 68 FVVMILVGLATERFVLRKLVNQPPITLFMATIGLTFFLEGLGPLLFGSEVRPI------- 120 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + S + F + + L A++ L+ ++T + A R + D+ +A Sbjct: 121 DLGIVDEPIQSVMDSIGIGISKFDLFASGMVVALVAALALFFQKTKVGRALRAVADDHQA 180 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 SL + + V+ +AG + + + + ++ILGG T Sbjct: 181 ALSLGIPLQHIWAVVWGVAGFVALIAGLLWGSRNGVQFALTMT---ALKALPVLILGGFT 237 Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 S+ I+ +L + + L +L+R L Sbjct: 238 SIPGAIVGGLIIGASEKLAEIYIPPVMQDAFGGNFGGIEGWFPYVFALL--FLLVRPEGL 295 Query: 340 LRLR 343 R Sbjct: 296 FGER 299 >gi|296157553|ref|ZP_06840388.1| inner-membrane translocator [Burkholderia sp. Ch1-1] gi|295892325|gb|EFG72108.1| inner-membrane translocator [Burkholderia sp. Ch1-1] Length = 294 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 106/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGFS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +GL W+++ ++ +I G GM + L++ + L+++ ++ G Sbjct: 63 YFGLPYWVMLVLAPLIVGLFGMAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLAVCFATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGINVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + L + T++ + Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVIEGLTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFG 291 >gi|222081678|ref|YP_002541043.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726357|gb|ACM29446.1| branched-chain amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 290 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 95/304 (31%), Gaps = 26/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G++++ G L ++ Y +G + GLS I V Sbjct: 9 IINGIVTGSVYAIVAVGMTMIFGVLRAINFAHGEYYMLGTFGAWFAIDYLGLSYEASIIV 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + ++G ++ A + ++ + +L + G Sbjct: 69 GVLSTIVVAYVVGKLVMQRMVGAPAESGVLATLGIALVLQNTVILVFG------------ 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G S +L+ + + L + + + + R + N + Sbjct: 117 GGYKFFSGGYIEPVSILGFSLAEQRIIILVVCLLVFIGLELMVTYSRMGKSMRAVSQNVE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + L F + +A ++G A + M + I+I+GG+ Sbjct: 177 CCEVVGIDVPQVVLRTFVLGAALAALSGVLTAPVNVSVYGGM-GELITFKTLPIIIMGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ A IL L F + F L L+++ R H Sbjct: 236 GNVRGTFFAAMILGIAESLVATYVGLQFRDTVGFAT-------------LILMLMWRPHG 282 Query: 339 LLRL 342 L Sbjct: 283 LFST 286 >gi|254487170|ref|ZP_05100375.1| inner-membrane translocator [Roseobacter sp. GAI101] gi|214044039|gb|EEB84677.1| inner-membrane translocator [Roseobacter sp. GAI101] Length = 353 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 18/313 (5%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L + + L S + + Q+ I + S+V+ + G + L+ Sbjct: 45 LIVLVLSLIVFGILLGSKFFSPFALTLILQQVAIVGIVGAAQSLVILTAG-IDLSVGAIM 103 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYGL + + + ACG + G + + + I Sbjct: 104 VLSSVVMGQFSFRYGLPPEIAVVCGLLCGTACGFVNGWLVAYMKLPPFIVTLGMWQIILA 163 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + + T I L F I Y ++ + L Sbjct: 164 SNFLYSANETIRSQDISANAPL------------LQLFGEKINIGGAIFTYGVIFLVVLV 211 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + LR TA + D+ A + +S + ++ AG Sbjct: 212 LFLAYVLRHTAWGRHVYAVGDDPDAAELSGVNVKRVLVSVYMLAGLICAFAGWALIGRIG 271 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP + + + ++VI GG S+ + I+ M + Sbjct: 272 SVSPTSGQLANIESITAVVIGGISLFGGRGSVLGMLFGALIVGVFTLGLRLMGADAQWTY 331 Query: 310 LKFDCSFNMRHTT 322 L Sbjct: 332 LLIGALIIAAVAV 344 >gi|33601732|ref|NP_889292.1| permease component of ABC transporter protein [Bordetella bronchiseptica RB50] gi|33576169|emb|CAE33248.1| permease component of ABC transporter protein [Bordetella bronchiseptica RB50] Length = 291 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 93/304 (30%), Gaps = 27/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + IYV+ A GLS++ G L +++ + +GAY+ V++ ++ Sbjct: 10 LFTGLALGAIYVLLAVGLSLIFGMLTVVNFAHGAFFMLGAYAGVVVLGLTQNFWAAMLLA 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 ++ + G + L+ + ++ + + + Sbjct: 70 PLAVAAVGMVCERWLIRPLYGRGIDYPLLLTFGLAYMLVEAVRMLFGRAGLPFDTPEALA 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 T F + + +++ L ++ L + +TA R + Sbjct: 130 GFT-----------NLGFADFPTYRLFIIAVTIVLLLALWLLIEKTAFGLIVRAGARDPV 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 L + L F + + +AG A + S I+ + ++GGM Sbjct: 179 IVRVLGIDVSRVWLLVFGLGTGIAALAGVLAAPLQGV--SPEMGTSVLIVAFVVTVVGGM 236 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 SL A ++ + F M + + V+L R Sbjct: 237 GSLMGAVVAGLLVGVAESMSVLF--------------FPEAAKVSMFVIMAAVLLWRPQG 282 Query: 339 LLRL 342 L Sbjct: 283 LFGR 286 >gi|323527859|ref|YP_004230012.1| inner-membrane translocator [Burkholderia sp. CCGE1001] gi|323384861|gb|ADX56952.1| inner-membrane translocator [Burkholderia sp. CCGE1001] Length = 294 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 106/315 (33%), Gaps = 26/315 (8%) Query: 27 FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86 + + + Y + + GL+++ G L +++ + +GA + S Sbjct: 3 IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGFS 62 Query: 87 RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146 +G+ W ++ ++ +I G G+++ L++ + L+++ ++ G Sbjct: 63 YFGVPYWPMLIIAPLIVGLFGVLIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122 Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206 +G G T F+ + +V++ + + + +T + Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLIVCFATWFVIEKTRL 172 Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266 R +N K + + + A AG A + Sbjct: 173 GAYLRAGTENPKLVEAFGINVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230 Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326 I V ++V++GGM S+ +L + L + T++ + Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVIEGLTRVF--------------YPEASATVVFV 276 Query: 327 ALFLVILMRSHSLLR 341 + LV+L+R L Sbjct: 277 IMALVLLVRPAGLFG 291 >gi|254518022|ref|ZP_05130078.1| ribose ABC transporter [Clostridium sp. 7_2_43FAA] gi|226911771|gb|EEH96972.1| ribose ABC transporter [Clostridium sp. 7_2_43FAA] Length = 312 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 96/312 (30%), Gaps = 27/312 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + V+ ++ + S I ++ Q+ + + A G++ V+ G + L+ A Sbjct: 15 LIGLVLLCAIITFVTPSFLSLSNITNVFTQVSVNAIIAVGMTFVI-LTGGIDLSVGSTLA 73 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 I + G L I V+A++ A G++ GL K + ATL IF+ Sbjct: 74 ISGALSASIIKSTGSVT-LAIIVAALVGIAIGLVNGLLISKGKLQAFI-ATLATMTIFRG 131 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 + + G ++ I F P + + +L Sbjct: 132 ATLVF------TNGTPISKLPEKFVNIGNGKIGFMPIPVIITVIVSIIAIYVL------- 178 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 +T + N+ + K + VS +AG + Sbjct: 179 ------SQTRFGRYLYALGGNEDSARLSGINTDKIKTLVYVVSGFASSIAGVIITSRIAS 232 Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 SP+ E + ++VI GG ++ I+ + MN F + Sbjct: 233 ASPNAGTSFELDAIAAVVIGGTSLAGGEGKITGTLIGALIIGVLNNGLNLMNVSPFYQSI 292 Query: 311 KFDCSFNMRHTT 322 + Sbjct: 293 VKGLVILIAVLL 304 >gi|170749705|ref|YP_001755965.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] gi|170656227|gb|ACB25282.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] Length = 289 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 91/304 (29%), Gaps = 26/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + S +Y + A G + G ++ +GA LG G + I + Sbjct: 6 LVSGLGLGSMYGLVALGFHVTYAVSGTVNFAQGSVVTLGAVLAYALGVTLGWPMPAAIVL 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + G+++ ++ + A L+ + +L T GK + L Sbjct: 66 ALAGCALFGLVVERALVRPFVARGSDAWLLATVAGGIVLDNTVLFTFGKEPRSLPSPLAT 125 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + V+ + + RRT + + N Sbjct: 126 KPVEILGTGIYPLQLAIPVVGIALAFAIRTVF-----------RRTDLGRVLLAVAQNAD 174 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + AFA+S+ G+AG A I ++ ILGG+ Sbjct: 175 AARLMGIDVRRTVACAFALSAVLAGIAGLLIAPLFSV--SAELGTLFGIKAFAVAILGGI 232 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S + + A + V + L+ F + L + +R Sbjct: 233 GSATGVILAGLLYGLVEAGVTATLGSTYTQLVVFS-------------VIILALTLRPDG 279 Query: 339 LLRL 342 LL Sbjct: 280 LLGR 283 >gi|27378726|ref|NP_770255.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351875|dbj|BAC48880.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 290 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 95/303 (31%), Gaps = 26/303 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y + A G++++ G L ++ Y +G + + L + + + Sbjct: 9 VVNGIVSGSVYAIVAVGMTMIFGVLRAINFAHGEYYMLGTFGAWFAIEYFDLPYPVAVVI 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + +++G ++ A A ++ + IL + G + Sbjct: 69 GVVATAVIAVVVGNFVMQRIVGAPAEAGVLATLGVALILQNTVILVFGGS---------- 118 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 S +++ + + L + + + A R + N + Sbjct: 119 --YKFFSGGYIEPVTLFGFTLAEQRILIIIVSLIVFVGLELMVTYSRMGKAMRAVSQNIE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + L F + + ++G A + M + I+I+GG+ Sbjct: 177 CCAVVGIDVRHIALWTFILGAGLAALSGVLTAPVNVSVYGGM-GELITFKTLPIIIMGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ A IL L F + F L LV++ R H Sbjct: 236 GNVRGTFVAAMILGIAESLVATYVGLQFRDTVGFAT-------------LMLVLMWRPHG 282 Query: 339 LLR 341 L Sbjct: 283 LFS 285 >gi|118589785|ref|ZP_01547190.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Stappia aggregata IAM 12614] gi|118437871|gb|EAV44507.1| hydrophobic amino acid ABC transporter (HAAT) family, permease protein [Stappia aggregata IAM 12614] Length = 290 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 102/310 (32%), Gaps = 27/310 (8%) Query: 34 KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93 Y+ + IY + A G+++V L L +GA+ + + + G+S Sbjct: 6 LINFYVIPGIVLGSIYALGAVGITLVFAILRYAHLAHGDLATLGAFIALAVVTGLGVSPL 65 Query: 94 LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153 + +P++ + + A + + + + I T++ S ++ + G + Sbjct: 66 VALPIAIIATAAVAVGIDKVFYEHLRERPKIVTVMASLGIALMIRAVVQVVWGVDTETYS 125 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + IR ++ M L + L+L R+ A R + Sbjct: 126 RGIVRPENYFGLRIRDREI------------LTVIAMIALVGGLQLFLTRSKWGKAMRAM 173 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 DN + + + +G F + + M + + + + Sbjct: 174 SDNPNLALLSGIDNKKVVMLTWVIVGGLCAASGVFLGLNTEL--KSMMGWQMLLPMFAAA 231 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 ILGG+ + ++ EL + + + + F L ++L Sbjct: 232 ILGGVGRIEGAVLGGLVVGIAEELSVLVIPSEYKAAMAF-------------AILLFMLL 278 Query: 334 MRSHSLLRLR 343 +R LL+ + Sbjct: 279 VRPTGLLKGK 288 >gi|114769197|ref|ZP_01446823.1| fructose ABC transporter, permease protein [alpha proteobacterium HTCC2255] gi|114550114|gb|EAU52995.1| fructose ABC transporter, permease protein [alpha proteobacterium HTCC2255] Length = 359 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 91/303 (30%), Gaps = 17/303 (5%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 L+ +V L+ + S + + Q+ + + A ++++ + G + L+ Sbjct: 51 ALVLIVSILIFGIIAPRFLSPGVLSLVLQQVTVIGIVAIAQTLIILTAG-IDLSVGAILV 109 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135 + + L YG+ + + I I G G K + + +S Sbjct: 110 LSTFVMGRLSVSYGVPLPIAIAAGMAIGTLMGAFNGFLVAKIKLPPFIVTLGTLSVFTAL 169 Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195 L ++ + + + ++ + + Y + + L+A Sbjct: 170 KLW-----------YSGSESIRNSDIEANAPSLLWFGEAAARPFGATITYGGIALILLAA 218 Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255 L+ TA I D+ +A +S +AV+ G Sbjct: 219 VFWFILQHTAWGRHVYAIGDDPEAAALSGIKTDRTLISVYAVAGLICGFGAWVAIGRVGS 278 Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310 ISP F+ + ++VI GG S+ I+ + + Sbjct: 279 ISPISFEEINLATITAVVIGGTSLFGGRGSIPGSVLGALIVGVFTTGLSLAGVDDYWQMF 338 Query: 311 KFD 313 Sbjct: 339 AVG 341 >gi|114319351|ref|YP_741034.1| inner-membrane translocator [Alkalilimnicola ehrlichii MLHE-1] gi|114225745|gb|ABI55544.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Alkalilimnicola ehrlichii MLHE-1] Length = 567 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 86/291 (29%), Gaps = 17/291 (5%) Query: 57 SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116 +I+ G + ++++ IGAY ++ + + + L + + I Sbjct: 292 AIIFGLMRVINMAHGELLMIGAYVTFLVQNFFVAFMPGLFNFYLVAAVPVAFIATALVGI 351 Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176 + + + +L W + + Sbjct: 352 AMER--GVIRFLYKRPLETLLATWGISLILIQTMRTLFGAQNVRVASPEWFSGSVQLMQG 409 Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236 V V+L F+ A + ++RT + R + N++ +L + + FA Sbjct: 410 VSLSTSRVGVILFAIFVVALVWFLMQRTRLGLEVRAVMQNREMAAALGVSANRVDMWTFA 469 Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296 + G+ G + + + + +V+LGG+ ++ + + + Sbjct: 470 AGAGVAGLGGVALSQIVNV--GPQLGQAYIVDSFMVVVLGGVGNVMGSVVSALGMGVFSK 527 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + L+ A+ L I R + L+ S Sbjct: 528 FLEPVTGAVMAK-------------ILLFTAIILFIQWRPQGIFALKGRSA 565 >gi|255658014|ref|ZP_05403423.1| urea ABC transporter, permease protein UrtB [Mitsuokella multacida DSM 20544] gi|260850217|gb|EEX70224.1| urea ABC transporter, permease protein UrtB [Mitsuokella multacida DSM 20544] Length = 296 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 84/295 (28%), Gaps = 31/295 (10%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-----SIWLLIPVSAMISGACGMIMGL 112 I G +G++++ +GAY+ ++ ++ I ++ +++ GMI+ + Sbjct: 26 ITFGLMGIINMAHGEFIMVGAYTTYVVQGLLMPVLGDGYFFVSIVLAFLVAAVFGMILEV 85 Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172 ++ + L + + + I VA Sbjct: 86 VVIRRLYGRPTDSLLATWGVSLILQQLARSIFGAPNVNVVAPAFLGG-----------SI 134 Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232 V ++L + + +L T R N+ L Sbjct: 135 SLLGVSMSYKRLFILALVLACLVGVWAFLYHTDFGRKMRACIQNRDMAQCLGIRSKRIDC 194 Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292 FA+ S G+AG + + +V+LGG+ L I+ Sbjct: 195 LTFALGSGLAGIAGCALTLLGSI--GPTLGQNYIVDTFMVVVLGGVGKLIGCISGALIIG 252 Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347 + S ++ + L + + L LR+ S Sbjct: 253 VAGTVFEF-------------GSTASIAKAAVLFLVILFLQKKPQGLFALRSRSL 294 >gi|255291857|dbj|BAH90352.1| branched-chain amino acid ABC transporter, permease protein [uncultured bacterium] gi|255292658|dbj|BAH89767.1| branched-chain amino acid ABC transporter, permease protein [uncultured bacterium] gi|255292839|dbj|BAH89940.1| branched-chain amino acid ABC transporter, permease protein [uncultured bacterium] Length = 324 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 119/331 (35%), Gaps = 37/331 (11%) Query: 10 KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69 K I LL V L + + Y +G I V A ++V G G +L Sbjct: 2 KNPLIRALLHSVILPALLVVAVSFFISGYQLVLGFGFFIAVGLAISWNLVGGFAGQFALG 61 Query: 70 CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129 + IG+Y+ + +R G I + V A++S A L+ R Y ++AT+ + Sbjct: 62 HSMYVGIGSYTVAFMLTRLGTPIPIAFLVGALLSAALAAGSTALFLRMRDAYFSVATMAL 121 Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189 + + +I T P I ++ +++V Sbjct: 122 ALACLSAVI---------------------ITPQLGATAGIILPGDLFIDDVTLFWVSGA 160 Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249 M ++ +I +++R + +RD++ A + K S A+S+A GA Sbjct: 161 MAIVALAISVFIRHSGYGLELMAMRDDETAAAESGVNALLMKCSIMAISAAIASCFGALI 220 Query: 250 AASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 + + P+ F I +I + ++GG+ ++ A++ G+ + Sbjct: 221 TLQKFTVDPNSAFSMLWTIQMIMMSVIGGLGTVWGPVLGAAVVFGLQQGLDSF------- 273 Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339 + + + L L+I + + Sbjct: 274 --------PVWNMLATAVILLLIIRLAPGGI 296 >gi|300312954|ref|YP_003777046.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075739|gb|ADJ65138.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 304 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 101/309 (32%), Gaps = 16/309 (5%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + ++ + A GL+++ G + ++L + I + + S WL + V Sbjct: 9 VLNSLQFGVMLFLIASGLTLIFGVMNFVNLAHGSFFMI-GAYVAAVVAGASGSFWLGLLV 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + A G ++ + + ++ + F I + G + + F Sbjct: 68 ALPATAALGFLLEWVVFRRLYQKDHMVQVLATFAFILIFNDGVRMIWGPQPLPLNMPAAF 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G + Y + V+ ++ ++ + RT I R +N + Sbjct: 128 AGP----------VNLFGLPYSSYRLLVMAVGVVVAIALYFLINRTRIGMWVRAGANNLE 177 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ I F+ +AG I+ +V++GG+ Sbjct: 178 MVTAMGINIRLLFRLVFSFGLLLAALAGIMLGPLVAV--QAGMGDDVLILAFVVVVIGGI 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335 S+ A I+ V L + F L D + + ++ + + V+ R Sbjct: 236 GSVPGAAIGALIVGVVDTLGRSLLPQLFALFLSADAAASVGPALGSMMIYLVMIAVLFWR 295 Query: 336 SHSLLRLRT 344 L RT Sbjct: 296 PSGLFPART 304 >gi|254474970|ref|ZP_05088356.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria sp. R11] gi|214029213|gb|EEB70048.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria sp. R11] Length = 336 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 81/312 (25%), Gaps = 19/312 (6%) Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY----SYVILGSRYGLSIWLLIPVSAMISG 104 + A G+++V L + A G L S L + A+ +G Sbjct: 25 LAIGALGVTLVYSVLRFSNFAHGDTMAFGTMITILVTWWLQSLGVSFGPLPTALLALPAG 84 Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL----- 159 + + A +F + + + NG + Sbjct: 85 IAATMALMLFTDRTVYKFYRAQKAKPVVFVMVSLGVMFMMNGLVRFVIGPGDQRFADGER 144 Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219 + + + ++ + A + +L +T + R DN+ Sbjct: 145 FLISARDFKAMTGLREGLAIKTTQGITVITAVIVVALLFWFLNKTRTGKSMRAYSDNEDL 204 Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279 + + + ++ +AG + + F + + + I+GG+ Sbjct: 205 ALLSGINPERVVMYTWLIVASLATIAGVLYGLDKSF--KPFTYFQLLLPIFAAAIVGGLG 262 Query: 280 SLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331 S I+ + + + L +V Sbjct: 263 SPIGAIAGGFIIAFSEVTITYAWKKVLTYVLPESLKPDGLVQLLSTDYKFAVSFTILVIV 322 Query: 332 ILMRSHSLLRLR 343 +L + L + + Sbjct: 323 LLFKPTGLFKGK 334 >gi|120609479|ref|YP_969157.1| inner-membrane translocator [Acidovorax citrulli AAC00-1] gi|120587943|gb|ABM31383.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Acidovorax citrulli AAC00-1] Length = 309 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 93/305 (30%), Gaps = 16/305 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++Y + A G ++ + G+ + A + + + A + Sbjct: 12 LMAGMLYALVALGFVLIFKASGVFNFAQGAMVLFAALAMARFAEWLPRWLGFDSLLLANV 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 C + + + + + LA+ L+ E ++ + Sbjct: 72 LAFCAAVACMVGVAWLVERLALRHLVNQEPIALLMATLGITYFLDGAGQLIFGSSTYKID 131 Query: 163 VRSLIRFFRFPSSFVIYEIFM----YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 V + + + Y + L A + L+ ++T A R + D+ + Sbjct: 132 VGMPKDPMIVLENVFEGGLLLSKEDLYAAVVAAALVALLSLFFQKTRTGRALRAVADDHQ 191 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A S+ + + ++V +AG + + + +VILGG+ Sbjct: 192 AAQSIGIPLSRIWVIVWSVGGIVALVAGIIWGSKLGVQFSIS---LVALKAFPVVILGGL 248 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 TS+ ++ ++ + ++ + + +L+R Sbjct: 249 TSVPGAIVGGLLIGVGEKVSEIYLGPFLGGGIENWFA---------YVLALGFLLIRPQG 299 Query: 339 LLRLR 343 L + Sbjct: 300 LFGDK 304 >gi|89054758|ref|YP_510209.1| inner-membrane translocator [Jannaschia sp. CCS1] gi|88864307|gb|ABD55184.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Jannaschia sp. CCS1] Length = 296 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 100/303 (33%), Gaps = 23/303 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + +Y +F+ G ++V G +L+L + GA G +WL + Sbjct: 6 LLNGLVVSGVYALFSLGFTLVFGIQRILNLAHGAVFMTGAMV-AYYTVDGGGPLWLAFIL 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + ++SG +++ + + + L+ + Sbjct: 65 AIIVSGFLSVLVEITCFRRLRRTGDEEFGGVVSSIGAGLVITTIAQQISNTQILRFPFET 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + F + + ++ + + +TA R + DN+ Sbjct: 125 FPVVI--------FRFWDLRVSMLQLFMAGAALAMVLILGYLFYKTAFGRRVRAVTDNEH 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 A + + + ++ A G AG + + IS M + +I+ILGG+ Sbjct: 177 AATLMGINPNRVYMQTYFLAGALAGAAGVLVGLAFNSISFVM-GEPYMMFGFAIIILGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A+ + V L ++ ALFL++L+R H Sbjct: 236 GSIPGALLASVVFGMVQTLTIAYLPSGLTDT-------------IIFAALFLILLVRPHG 282 Query: 339 LLR 341 LL Sbjct: 283 LLG 285 >gi|153011384|ref|YP_001372598.1| monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC 49188] gi|151563272|gb|ABS16769.1| Monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC 49188] Length = 334 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 + + ++ +L + I ++ +Q I + A G++ V+ + L+ Sbjct: 27 IFIAFLLLVTILSFSNQYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 A+ + + P S I+ G+++G+ G ++ + Sbjct: 86 ALAGIVSASFATTSATAGVAGAPYSPFIAIPVGLLVGVGCGALVGTIVSRFAVPAFVATL 145 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 +L + +T G L + + + + ++ + + Sbjct: 146 GMLSAARGLTLIYGGGKPVPALIPDFRWIGT------------GNILGIPVPVILLAVVF 193 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 + L R+ + N A + I + S + +S G+AG +A Sbjct: 194 LASWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253 Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 S + I+ V++ GG+ ++ I+ + M + Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGVGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312 Query: 309 LLKFDCSFNMRHTT 322 + Sbjct: 313 QVLKGALIVGAVML 326 >gi|89054648|ref|YP_510099.1| inner-membrane translocator [Jannaschia sp. CCS1] gi|88864197|gb|ABD55074.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Jannaschia sp. CCS1] Length = 443 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 114/360 (31%), Gaps = 25/360 (6%) Query: 5 SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64 + L L + L + I + ++ G ++ Sbjct: 88 PVPEAWSAGGLRTLIGLVLGALTIVGAILLWNAMPKGRLRGIAMLIVLIIGFTL---FRR 144 Query: 65 LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124 + + +I + GL + L PV +++ I+G +L R DYLAI Sbjct: 145 VFDVGVDAVESIDP-ASTGFLGGLGLPVLLAWPVGGLLAAGAAWIIGKTALGLRSDYLAI 203 Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF---------PSS 175 ATL ++EI IL + G + +R +++ F F +S Sbjct: 204 ATLGIAEIIIAILKNEDWLARGVKNVTGIERPVPYEVDLQASDGFLSFATNIGADPVTAS 263 Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235 + ++ + L + L + + R IRDN+ + ++ + L F Sbjct: 264 TITVKLLYAALFLIVVGLLIWLSEKAWNSPWGRMMRAIRDNEVSASAMGKDVKARHLQIF 323 Query: 236 AVSSAFIGMAGAFFAAS-RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294 + SA G+AGA + ++ +VI+GG + ++ + Sbjct: 324 ILGSAICGIAGAMMTTLDSQLVPGTYQPLRFTFLIWVMVIVGGSGNNWGAVLGGFLIWWL 383 Query: 295 VELCCGMNFYYFNSLLK-----------FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + ++ S M + L LV+ L+ R Sbjct: 384 WVQVEPLGLLLMQTITAGMDDGYWLREHLLDSAAHMRLLTMGMILLLVLRFSPRGLIPER 443 Score = 41.0 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 36/87 (41%) Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76 ++ +LFL G +S ++ LI + A G+++ G GL ++ + A+ Sbjct: 17 IMLFALVAILFLGTGFVQSWNTALTIFNMGLISCIMALGVNMQWGYAGLFNVGIMGFVAL 76 Query: 77 GAYSYVILGSRYGLSIWLLIPVSAMIS 103 G + V++ W + +I Sbjct: 77 GGLATVLVSVEPVPEAWSAGGLRTLIG 103 >gi|33594107|ref|NP_881751.1| putative ABC transpoter permease protein [Bordetella pertussis Tohama I] gi|33564181|emb|CAE43460.1| putative ABC transpoter permease protein [Bordetella pertussis Tohama I] gi|332383523|gb|AEE68370.1| putative ABC transpoter permease protein [Bordetella pertussis CS] Length = 290 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 100/301 (33%), Gaps = 26/301 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + Y + A G ++++G L++ Y +GA+ + G+ L +P Sbjct: 7 LINGIVLGHAYALIAIGWTLLLGVARLVNFGHGQMYMVGAFVTWWATTSAGMPYLLALPT 66 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + G+ M L+ + ++ +IM+ F ++ + G G Sbjct: 67 AMALGALIGLAMQRIMLRATFEQNLVSIMIMTLGFGYVIQGAASLIFGSTGQI------- 119 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + + + +++ + A + L + R + ++ K Sbjct: 120 ----LDTAWSQRDIEVGELWVTWQDAAIVVAAIAVFAGLKWLLEGSRAGRLVRMVAEDPK 175 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + FA A + A A ++ F E II +V+LGG+ Sbjct: 176 LAQLAGVDVRRIYYGVFAFEGAAVAFAAGMVAPRTPILT--SMGFEEVIITFVVVVLGGI 233 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S++ A L L + + + F + L V+++R Sbjct: 234 GSVTGSYAAGVALGVFTALFSALVSPTYATAAAF-------------LVLIGVLVLRPGG 280 Query: 339 L 339 L Sbjct: 281 L 281 >gi|146297470|ref|YP_001181241.1| inner-membrane translocator [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145411046|gb|ABP68050.1| urea ABC transporter membrane protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 347 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 97/311 (31%), Gaps = 14/311 (4%) Query: 22 YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81 L L L + + ++ + L Y + A G+ ++ G G+LSL + + +GAY+ Sbjct: 15 LILFGSLMLLPFVTSSFRVALFGKYLSYSIAAVGIVLLWGYTGILSLGQAVFFGLGAYAL 74 Query: 82 VILGSRYGLSI-------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI-- 132 + + W + ++ + L L L Sbjct: 75 GMYLKLEASNFGLTDFMQWCGLEKLPLLWVPFKNVFIAILLGILIPALLAGALGYFTFKR 134 Query: 133 ----FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188 LI L + + F ++++YY+ L Sbjct: 135 SIKDVYFTLITQALAVIFVTLFIGQQPLTGGTNGLTNFKTFLGISLKDEKIKMWIYYLTL 194 Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248 + + + + + N IRDN++ L + K++ + S+ + G Sbjct: 195 AVVIVLYVVGKVIVK-KYGNILIAIRDNEERLKYLGINPLGYKITIYIFSAVLAAIGGML 253 Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308 F + ISP +I ++ V +GG +L T + + + + Sbjct: 254 FVLNVGMISPSEMGIIPSIELVLGVAIGGKVNLLGGIAGTVVAYFLKSIISENYPDIWLY 313 Query: 309 LLKFDCSFNMR 319 LL Sbjct: 314 LLGVVFIMISL 324 >gi|332799565|ref|YP_004461064.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp. Re1] gi|332697300|gb|AEE91757.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter sp. Re1] Length = 297 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 93/305 (30%), Gaps = 22/305 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + +Y + A G ++V G + L++ + AY + L WL + V Sbjct: 10 LVNGISLGSLYALIAIGYTMVYGIVRLINFAHGDIIMLAAYFVFFGVGMFSLPWWLAVIV 69 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 S ++ G+++ + K + I+ LI + L + G F Sbjct: 70 SIALTVLVGIVIEKAAYKPLREAPRISVLISAIGVSFFLENMGLVVFGGRAKAFYVPPIF 129 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G S V + + L ++ + T A R + Sbjct: 130 KGV----------INISGVSITSLGIIIPIISAILLFGMVYIVNHTVTGMAMRACSKDMD 179 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + F + SA + G +A +I + + ++GG+ Sbjct: 180 TAKLMGIDVDAIISFTFGIGSALAAVGGIMWALKYPQI-HPLIGIMPGLKCFIAAVVGGI 238 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ L + L+ F + I L +++L + Sbjct: 239 GNIP-----------GAMLGGFLLGLGEILLVAFLPGLSGYRDAFAFIILIVILLFKPTG 287 Query: 339 LLRLR 343 +L + Sbjct: 288 ILGEK 292 >gi|229826725|ref|ZP_04452794.1| hypothetical protein GCWU000182_02101 [Abiotrophia defectiva ATCC 49176] gi|229789595|gb|EEP25709.1| hypothetical protein GCWU000182_02101 [Abiotrophia defectiva ATCC 49176] Length = 291 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 95/306 (31%), Gaps = 26/306 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 + + + Y + A G S+V G L L++ + YA GA ++ ++ Sbjct: 6 VFNGLALGMGYALIAVGYSLVFGILRLVNFSHGAIYAFGAEMAMVFIGMNFGIFPGILAA 65 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAI-ATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + +I R A+LI + NI+ I G Sbjct: 66 MVLTGILGILIDKAALEPLRKKRSMPIASLITTIGISNIITNLLIIFLGSE--------- 116 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 +SL + + + + L A+++ + +T I A R N Sbjct: 117 --KRNFKSLFGQTTIQIGQISISMTQIMMCVVSLLLMATLMFVVYKTKIGLAMRATEQNT 174 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 KA + + F F ++ +AGA + + P+M F + + +LGG Sbjct: 175 KAANLMGVNVNFVISFTFFLAGVSATIAGALVSGYYQIVYPNM-GFMAGLKAFAAAVLGG 233 Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337 + SL ++ + + + F + R H Sbjct: 234 IGSLPGALLGGLVVGVSESMAATFLGSTYRDSIAFIILIIVLIV-------------RPH 280 Query: 338 SLLRLR 343 L + Sbjct: 281 GLFGRK 286 >gi|29827733|ref|NP_822367.1| branched-chain amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29604833|dbj|BAC68902.1| putative branched-chain amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 369 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 96/342 (28%), Gaps = 29/342 (8%) Query: 16 CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75 + + + + + L M A G+ + G GLL+L + + Sbjct: 16 AAAGFTGAAVALFAVAPLALSDFRLGLLAKYLCTAMVAVGICLAWGRGGLLTLGQGVFFG 75 Query: 76 IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS----- 130 +G Y+ + + + A + LA L+ Sbjct: 76 LGGYAMAMHLKIVDAGPGTIPDFMQLYGTATELPWWWRPFANPVFALAATVLLPMAVAAV 135 Query: 131 ----------EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180 + ++ + + + FF + + + Sbjct: 136 LGSFIFRRRVKGAYFAILSQALAAAFAIWLVGQQATTGGTNGLTDIQGFFGYDLDDPVNQ 195 Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240 +Y+V+ L ++ L + +RD+++ L KL A+ V++ Sbjct: 196 RMVYFVIAAALLLLIALARQLIHSRYGELLVAVRDSEERVRFLGYNPANVKLVAYVVAAG 255 Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300 G+AGA F + ISP + +I ++ +GG SL+ + Sbjct: 256 MAGLAGALFVPAVGIISPALIGIVPSIELVIGAAVGGRASLAGAVLGAIAVAWAKTALSE 315 Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 F T + + + L L Sbjct: 316 --------------EFPAAWTYFQGLLFIVALAFLPGGLASL 343 >gi|209694897|ref|YP_002262825.1| ribose ABC transporter permease protein [Aliivibrio salmonicida LFI1238] gi|208008848|emb|CAQ79055.1| ribose transport system permease protein RbsC [Aliivibrio salmonicida LFI1238] Length = 323 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 82/301 (27%), Gaps = 25/301 (8%) Query: 28 LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87 + I ++ Q + + A G+++V+ + G + L+ A+ ++ Sbjct: 37 FLNDNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLALCG-AFAATMIG 94 Query: 88 YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147 + + +P S + G I G+ K + L+ + Sbjct: 95 LEIHPIIAVPTSLLAGAILGAISGIIIAKGKVQAFIAT-----------LVTMTLLRGVT 143 Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207 + T V +F + I V++ T Sbjct: 144 MVYTEGRPISTGFTDVADSFSWFGTGYALGIPVPIWLMVIVFASVWYLL-----NHTRFG 198 Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267 + N+ A + K+ +A+ +AG + P + Sbjct: 199 RYVYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGLIVTSRLSSAQPTA-GMGYEL 257 Query: 268 IVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321 I+ V+LGG + I+ + ++ + ++ + Sbjct: 258 DAIAAVVLGGTSLAGGKGRIMGTLVGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVL 317 Query: 322 T 322 Sbjct: 318 V 318 >gi|170749721|ref|YP_001755981.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] gi|170656243|gb|ACB25298.1| inner-membrane translocator [Methylobacterium radiotolerans JCM 2831] Length = 348 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 87/287 (30%), Gaps = 3/287 (1%) Query: 20 VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79 V + + Y +V A GL ++ G G LS + + Y Sbjct: 22 VFAVAVAAAVAYPWFADGYTVGNTAYFFCWVFMALGLCLIWGYGGALSFGQTAFFGLSGY 81 Query: 80 SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139 +Y +L G + + + ++ L + L + + + ++ Sbjct: 82 AYGVLTLNVGAAYGFTLAALVLAVALSAVMAALLGYFLFFGRIGGVFLGIITLSVTLALE 141 Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199 + + + + + G+ L + L Sbjct: 142 RFMAQTAGPEWKIGAARLNGYNGMSGMPPLTVPWFDGDLVLFPDVALYYGLLALLIVVYL 201 Query: 200 WLR---RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256 LR N IR+N + L + +L+AF + S G++G + A I Sbjct: 202 ALRILVNARFGNVLVAIRENPERAEMLGYDVRRYQLAAFVIGSGLAGLSGTLYTAWGQYI 261 Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303 +P + + + V +GG L+ T +++G + Sbjct: 262 TPSSMGLTAAALPVIWVAVGGRGDLTATLIGTLLVLGGFQALTIYGS 308 >gi|163858811|ref|YP_001633109.1| putative branched-chain amino acid transport permease [Bordetella petrii DSM 12804] gi|163262539|emb|CAP44842.1| putative branched-chain amino acid transport permease [Bordetella petrii] Length = 290 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 97/307 (31%), Gaps = 28/307 (9%) Query: 37 KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96 I + + Y + A GLS+++ +++ A+G Y L W + Sbjct: 7 FNIFNGLVIGAFYALMALGLSLIINLTNVINFAHGEFLALGGYIAY--TLDPYLGFWWAL 64 Query: 97 PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156 VS I+ G+++ ++ + + +L+++ +L G G+ + Sbjct: 65 IVSPFITAIIGLVVERVLIRPLYNRDPLYSLLLTFGLAYVLQDSIRFIWGAQGLPLQTPA 124 Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216 +L + +++ + A + L++T + R + Sbjct: 125 VLNSPLSPTLFFLTG----------YRVFMVALVAVAVAVLFYVLKKTRVGMRIRAGTLD 174 Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276 + +L + + F + F G+AG A VI+G Sbjct: 175 LEMVSALGVDVRILRNLNFGLGIFFAGLAGVLAAGMLGLTPTIGEGLIMPS--FVAVIVG 232 Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 G+ SL ++ + + + + + +V+L R Sbjct: 233 GLGSLVGTLFGGLVIGVAAGVVTVFYPSASEAS--------------IYVIMAIVLLFRP 278 Query: 337 HSLLRLR 343 + L + Sbjct: 279 YGLFGEK 285 >gi|126737860|ref|ZP_01753590.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] gi|126721253|gb|EBA17957.1| branched-chain amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] Length = 440 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 97/275 (35%), Gaps = 21/275 (7%) Query: 90 LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149 + L PV +++ ++G +L R DYLAIATL ++EI +L ++ G Sbjct: 166 WPVILSWPVGGLLAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLSRGVKN 225 Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF---------LSASIILW 200 + R +++ F + + + + + + + + Sbjct: 226 VVGLPRPLPFEVDLQNDPAFVDRAAGLGLDPVLASTLYVKLGYAILFAVVLLALLWMAQM 285 Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260 ++ R IRDN+ A ++ + L F + SA G+AGA +++P Sbjct: 286 ALKSPWGRMMRAIRDNEVAAEAMGKDVTRRHLQIFVLGSAICGIAGAMMTTLDGQLTPGT 345 Query: 261 FKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-------- 311 + ++ +VI+GG + ++ + M+ + L Sbjct: 346 YNPLRFTFLIWVMVIVGGSGNNFGSVLGGFLIWFLWIKVEPMSLELISLLTSGMAEDSFL 405 Query: 312 ---FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343 + M + L LV+ L+ + Sbjct: 406 RGHLMENAAHMRLFTMGLILLLVLRFSPRGLIPEK 440 Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 34/99 (34%) Query: 8 LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67 + + ++ + + + S + LI + A G+++ G GL + Sbjct: 5 MKHSLLFAAVGLLIVMEGVTDWGFFSGSWNSSLVILNMGLISAIMALGVNLQWGFAGLFN 64 Query: 68 LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106 + + A+G + V+ + W +++ Sbjct: 65 VGIMGFTALGGLAVVLTATPPTPGAWSAGGAGVVMAMVM 103 >gi|33599357|ref|NP_886917.1| branched-chain amino acid transport system permease [Bordetella bronchiseptica RB50] gi|33566953|emb|CAE30866.1| branched-chain amino acid transport system permease [Bordetella bronchiseptica RB50] Length = 314 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 105/302 (34%), Gaps = 37/302 (12%) Query: 41 SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100 S+ + + I V+ V +G L+ +GAY + + L + SA Sbjct: 31 SLVLWLAINVLITASFRFVT-LIGELNFAVAGFVGLGAYMAGVAAVQLEWPFLLTLAASA 89 Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160 + +G ++ G +L+ +G Y + + +E+ + I K + + Sbjct: 90 VFAGLVSLVFGYITLRAKGAYFMLISFAFTEVIRMIYTKTEAVGGSS------------- 136 Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220 + E + ++ + ++ L ++ IR+N Sbjct: 137 --------GMIGIFAPAYLEAYYPAFVIAVVLALLWVLWRLEKSDFGKVLVAIRNNDAIV 188 Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280 ++ + K+ VSS G+AGA A + + ISP F F + ++ + +GG + Sbjct: 189 ETVGINVHLTKVLCLGVSSFVAGIAGALLAYANNVISPGDFGFLLAVYALAYLKVGGESH 248 Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + +L + +F SF A+ + +L+ L+ Sbjct: 249 ILGAVVGAIVLTLL---------------GQFALSFGPYEHIFYGAAIVISVLLMPGGLI 293 Query: 341 RL 342 L Sbjct: 294 GL 295 >gi|262373786|ref|ZP_06067064.1| branched chain amino acid ABC transporter permease [Acinetobacter junii SH205] gi|262311539|gb|EEY92625.1| branched chain amino acid ABC transporter permease [Acinetobacter junii SH205] Length = 598 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 29/291 (9%), Positives = 88/291 (30%), Gaps = 17/291 (5%) Query: 58 IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117 I G LG++++ IGAY+ ++ S + L+ + + ++ Sbjct: 325 ITYGLLGVINMAHGELIMIGAYTTYVIQSFFKTHFAGLVDWYLLAAIPAAFLVSALIGML 384 Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177 + + + +L + + + + + + + + + Sbjct: 385 IER--TVIRPLYGRQLETLLATFGVSLILMQSVRMIFGAQNVEVSNVAWLSGGIALTPSL 442 Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237 + ++ + ++ L +T R + N++ ++ + AF + Sbjct: 443 MLPYNRIAIIGFTVAVLLLLVFLLNKTRFGLFVRAVTQNRQMARAVGIRSARIDMMAFGL 502 Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297 S G+AG A + + + ++ +V + + Sbjct: 503 GSGLAGLAGCALAQVGNVGPDLGQNYIIDAFLVVVVG--------------GVGQVWGAV 548 Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348 + ++L+ + L+ + + L I R L ++ Sbjct: 549 LAALGLGISGTVLEIGLGAVLAKIILL-VLVILFIQKRPQGLFAIKGRFVE 598 >gi|212550589|ref|YP_002308906.1| urea/branched-chain amino acid ABC transporter permease [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548827|dbj|BAG83495.1| ABC-type urea/branched-chain amino acid transporter permease component UrtB [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 301 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 28/303 (9%), Positives = 93/303 (30%), Gaps = 17/303 (5%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 + ++ A GLS++ G G+++++ IG+Y+ + + + A Sbjct: 12 LSLGSVLILEALGLSVIYGLAGIINMSHGEFVMIGSYTTYCIQQLFIAFLPPEWEGIAFF 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 + + L I L + + + + + L + Sbjct: 72 VSLPISFLSSALAGLVIERLIIRYLYSRPLESLLATWGISLILIQIARNIFGDL--ISIK 129 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 +++ +I +++L + + + ++T + R++ N+ Sbjct: 130 TPAILSGGFEIIKGLILPYNRLFIILVSIVVFILMYILFQKTRLGIQIRSVTQNRNISAC 189 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + + F + S G+AG + + + + +V+ GG+ L Sbjct: 190 VGISTQRIDMITFMLGSGLAGIAGCAVTLIGNIVPNMGQTYI--VDSFLVVVTGGVGKLL 247 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342 + + ++ + +++ + + + + Sbjct: 248 GCIVSGLGIGIFSKVFEIGFEAVYGK-------------VFILVLIIIYLQYKPEGFFSD 294 Query: 343 RTP 345 ++ Sbjct: 295 KSR 297 >gi|312200549|ref|YP_004020610.1| inner-membrane translocator [Frankia sp. EuI1c] gi|311231885|gb|ADP84740.1| inner-membrane translocator [Frankia sp. EuI1c] Length = 310 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 34/310 (10%), Positives = 92/310 (29%), Gaps = 22/310 (7%) Query: 40 DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99 + +Y + A G ++V G L L++ + +GA+ + +R + ++ P Sbjct: 12 IDGLMSGSLYAVIALGYTLVYGVLQLINFAHSEVFMLGAF-GGLFAARPIIHMFDHTPSG 70 Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT------NGKAGIYVA 153 G + + + + + + + + + + Sbjct: 71 MASVGIVMVGLIAGAASGALAAFVLERVAYRPLRKRNAPRLAYLISAIGASGFAVNMAGK 130 Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213 + + F ++ F+ + + RT + + R + Sbjct: 131 LWGHQNVPLPPAFTNGVVFHIFTGKVNTQTLVIIAVAAFMLIVLDTLVARTRLGQSIRAV 190 Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273 + + + + F + A G G A + + F + + Sbjct: 191 AQDADTAIMMGVNVERVIVLTFVIGGALAGAGGFLQAMTFSAAN--NMGFLPGVKAFTAA 248 Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333 +LGG+ ++ L + + + ++ F + L L+++ Sbjct: 249 VLGGIGNVRGAVLGGLTLGLIESYGGFIFQASYKDVIAF-------------LVLVLILM 295 Query: 334 MRSHSLLRLR 343 +R LL R Sbjct: 296 VRPTGLLGER 305 >gi|190894959|ref|YP_001985252.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700620|gb|ACE94702.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|327193243|gb|EGE60149.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 290 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 94/304 (30%), Gaps = 26/304 (8%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I + + +Y + A G++++ G L ++ Y +G + GLS I V Sbjct: 9 IINGIVTGSVYAIVAVGMTMIFGVLRAINFAHGEYYMLGTFGAWFAIDYLGLSYEASIVV 68 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + ++G ++ + ++ + +L + G Sbjct: 69 GVLSTIVIAYVVGKFVMQRMVGAPPESGVLATLGIALVLQNTVILVFG------------ 116 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 G S +L+ + + L + T + + R + N + Sbjct: 117 GGYKFFSGGYIEPVSILGFSLAEQRVIILIVCLIVFIGLELMVTYTRMGKSMRAVSQNVE 176 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + L F + +A ++G A + M + I+I+GG+ Sbjct: 177 CCEVVGIDVPQVVLRTFILGAALAALSGVLTAPVNVSVYGGM-GELITFKTLPIIIMGGL 235 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 ++ A IL L F + F L L+++ R H Sbjct: 236 GNVRGTFFAAMILGIAESLVATYVGLQFRDTVGFAT-------------LILMLMWRPHG 282 Query: 339 LLRL 342 L Sbjct: 283 LFST 286 >gi|148377283|ref|YP_001256159.1| sugar ABC transporter permease [Mycoplasma agalactiae PG2] gi|148291329|emb|CAL58712.1| Sugar ABC transporter Permease [Mycoplasma agalactiae PG2] Length = 662 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 109/355 (30%), Gaps = 22/355 (6%) Query: 2 SIFSLRLNKYDKIL-CLLAVVYPLLLFLFLGATKSQKYIDSMGI------------QILI 48 S S R Y+ I + + ++ L T ++ + +I Sbjct: 31 SAVSTRRKAYNSIWSVVFGIFVSSIVLLVFFQTNPFEFFAQVFNATATKGNIDWVYIFII 90 Query: 49 YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-VILGSRYGLSIWLLIPVSAMISGACG 107 Y + + G+ GL ++ ++ ++ + I ++ Sbjct: 91 YSLASIGVGFSFK-TGLFNIGVAGQMSLSGVICLALINQSNVIESNGAIKNQGLVFLIML 149 Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167 + + + L L A + E+ IL+ W + G + Sbjct: 150 LSIVIGFLYAAIAGLCKAFFNIHEVVSTILLNWVAVYIGSFIFGSKSPFNNSFVFKNAST 209 Query: 168 RFFRFPSSFVIYEIFMYYV--LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225 S ++ +++ ++ + F+S ++ + T++ + N+ A Sbjct: 210 GSAPINISGGFFDKSSFWIFGIVLVAFVSLTLYMIFAFTSLGYKIKMNGLNKDASSYAGV 269 Query: 226 TIIFAKLSAFAVSSAFIGMAGAF---FAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 + + S A G+AG F A + + I+I ++ G+ S Sbjct: 270 NQKLTTVLSMGFSGALAGLAGFIHFVFKAKQYDVITLSSPLPLGFDTIAISLI-GINSPI 328 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL-MRS 336 I ++ + + +Y S +K + + AL L+ R Sbjct: 329 GILFSSVFYTMLEFSRIELISFYSTSGVKEGGIDLVVGVIIFTTALALMFTNFRP 383 >gi|300864178|ref|ZP_07109066.1| permease protein of branched-chain amino acid ABC transporter [Oscillatoria sp. PCC 6506] gi|300337822|emb|CBN54212.1| permease protein of branched-chain amino acid ABC transporter [Oscillatoria sp. PCC 6506] Length = 308 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 95/299 (31%), Gaps = 14/299 (4%) Query: 42 MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101 + + +L+ M L + + G LSL YA+G Y IL + Sbjct: 11 LIVSMLLGAMLGLSLYLPL-MTGQLSLASPGFYALGGYIAAILSTTVFKQ---------- 59 Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161 + L+ + L + + ++ + R+ L Sbjct: 60 --TGNLFPLPFLLLEMLIAGIISGCLGIFVGVPALRLRGIYLAIATIAFVEILRVLSLNL 117 Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221 + I +V + + +S +++ L R + A+ IR ++ Sbjct: 118 DITGGAVGIFGIPQPFGTPIEYLWVAVPLLLVSMALLYRLERIRVGRAFAAIRADELVAD 177 Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281 ++ F K+ AF + + G+ GA A + + F +II ++ V++GG + Sbjct: 178 AIGINPTFYKVLAFTLGAILAGVVGAVSAHFLNTWNARQGTFDASIIYLTSVLIGGNRTF 237 Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340 + + E+ + + + + + L + L+ Sbjct: 238 LGPVLGGMVFTALPEVLRALA-ATAGLPIWLAQFLRDGRLIIFGLLIVLGTIFFPQGLV 295 >gi|300704062|ref|YP_003745664.1| ABC branched-chain amino acid transporter membrane component (livh) [Ralstonia solanacearum CFBP2957] gi|299071725|emb|CBJ43049.1| putative ABC-type branched-chain amino acid transporter, membrane component (livH) [Ralstonia solanacearum CFBP2957] Length = 315 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 110/321 (34%), Gaps = 27/321 (8%) Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97 + + L+ M + GL+++ +G+L+ Y +GAY ++ W + Sbjct: 7 NLLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVISVHL--GFWAALI 64 Query: 98 VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157 + ++ GA G ++ L+ Y +A L+ + ++ + + G L Sbjct: 65 AAPLLVGALGALVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 115 Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217 + V + F + + +++L + I L L RT I + + Sbjct: 116 AVPYRVPEALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 175 Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277 +L + + F A G+AG ++ + IV + ++GG Sbjct: 176 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 233 Query: 278 MTSLSKIAKATAILIGVVEL--------------CCGMNFYYFNSLLKFDCSFNMRHTTL 323 M SL A+ ++ + + + ++ + L Sbjct: 234 MGSLVGAFVASLLIGCIQTFAVTLDLSVASLLGKLGVVLNPDVPLISVWNLTIAQVAPVL 293 Query: 324 MVIALFLVILMRSHSLLRLRT 344 + L L+++ R L+ R Sbjct: 294 PYLLLVLMLIFRPRGLMGTRE 314 >gi|33591819|ref|NP_879463.1| branched-chain amino acid ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33603670|ref|NP_891230.1| branched-chain amino acid ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|33571462|emb|CAE44947.1| branched-chain amino acid ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33577795|emb|CAE35060.1| branched-chain amino acid ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|332381236|gb|AEE66083.1| branched-chain amino acid ABC transporter, permease protein [Bordetella pertussis CS] Length = 294 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 92/306 (30%), Gaps = 23/306 (7%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I S +Y + GL++ + +L+ GA ++ + Sbjct: 8 IVSGLSVGAVYALIGLGLNLTFWTTRVLNFGQGSVLMAGAMLTAVMVGAGVNVFLAVGVS 67 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + ++ + R ++ ++ + L G + D L+ Sbjct: 68 LLVTAFILWIVELVGVRPMRRMSGSMGWVVSTLGIGIFLQGMASWLFGTQAVAFPDVLFS 127 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 TV + V + + + L+LR + R + ++ Sbjct: 128 SADTV---------EFMGAYISLQYIAVFVISVMIVCLMELFLRHSIWGYGVRAVAHDRD 178 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 + + + +F VS G+AG + + P+ F I+ ++GGM Sbjct: 179 LAALMGIPVYRVVVFSFLVSGVLAGIAGILVSQVSGTVDPN-FGLHLLILAFVAAVVGGM 237 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S IL + +L G ++ F + L V+ +R Sbjct: 238 GSAFGSLVGGLILGIMEKLVGGYVSPAAAEVVAF-------------VLLIGVLTIRPQG 284 Query: 339 LLRLRT 344 L R Sbjct: 285 LFGKRE 290 >gi|90418667|ref|ZP_01226578.1| possible permease component, ABC-type branched-chain amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90336747|gb|EAS50452.1| possible permease component, ABC-type branched-chain amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 298 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 88/302 (29%), Gaps = 19/302 (6%) Query: 39 IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98 I I + A GL++V G L +L+ YA+GAYS + + +P Sbjct: 8 ILDGLIYASWLFIVALGLTLVFGVLRILNFAHGGLYALGAYSAAVAVPFFASW---GLPP 64 Query: 99 SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158 + + + + + + L IL+ + Sbjct: 65 AFSLIAMFIAALAVAIVIAPLIERGLLRLFYGRDEVLILLVTYAVFLILEDATKMVFGVD 124 Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218 + Y + ++ + L L RT I + + + Sbjct: 125 PYYVFEPRNLLGNVEVGSLFYVGYDLALIGLAIVCGLGVWLGLHRTRIGKVTVAVINEPE 184 Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278 ++ I L AF + + GAF + S ++ ++VI+GG+ Sbjct: 185 VSAAMGVNIARIYLLAFGLGVFLAALGGAFTSPLISV--QPGISVSVIVVSFAVVIIGGL 242 Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338 S+ A I+ ++ + + +V++ R Sbjct: 243 GSIPGAAIGALIVGLARSFAV--------------YEAPEAEIFIIYLVMVIVLIFRPEG 288 Query: 339 LL 340 L Sbjct: 289 LF 290 >gi|77464569|ref|YP_354073.1| ABC sugar transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126463409|ref|YP_001044523.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] gi|77388987|gb|ABA80172.1| ABC sugar transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126105073|gb|ABN77751.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029] Length = 363 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 86/313 (27%), Gaps = 11/313 (3%) Query: 15 LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74 L +L V + L S + + Q+ I + ++VV + G + L+ Sbjct: 48 LIVLVVSISIFGALLGQKFFSAFTLTLILQQVAIVGIVGAAQTLVVLTAG-IDLSVGAIM 106 Query: 75 AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134 + + RYG+ L + G + G + + + + + Sbjct: 107 VLSSVIMGQFTFRYGIPAPLSVLCGLAAGAGIGFVNGTLVARMKLPPFIVTLGMWQIVLA 166 Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194 + T I + F Y + + L Sbjct: 167 ANFLYSANETIRSQDISAQAPILQFFGN-----TFRLGADEAGRGGAVFTYGAVLLILLV 221 Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254 I LR+TA + D+ A ++ + +S +AG Sbjct: 222 LVIAYVLRQTAWGRHVYAVGDDPDAAELAGVQTRNVLVTVYTLSGLICALAGWVMIGRLG 281 Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309 +SP +F+ + ++VI GG S+ + I+ M + Sbjct: 282 SVSPTAGQFANIESITAVVIGGISLFGGRGSVLGMLFGALIVGVFSLGLKLMGTDPQWTY 341 Query: 310 LKFDCSFNMRHTT 322 L Sbjct: 342 LLIGILIIAAVAV 354 >gi|167588737|ref|ZP_02381125.1| inner-membrane translocator [Burkholderia ubonensis Bu] Length = 345 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 35/326 (10%), Positives = 98/326 (30%), Gaps = 18/326 (5%) Query: 2 SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61 + F + + ++ + + ++ + + A + V+ Sbjct: 25 ARFFNPAARQRLLAFASLLLLIAFFSVASPNFLEVDNLVTILQATAVNGVLAVACTYVII 84 Query: 62 SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121 + G + L+ A ++ + +G+ + + I + G + G+ K + Sbjct: 85 TSG-IDLSVGTLMTFCAVMTGVVLTYWGMPLPVGIVAALGFGALSGCVSGIVIAKMKVPP 143 Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181 + + G + + R + T + ++ + Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFMSIAQDSLIGSLVPAL 191 Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241 + +L + ++ + L +T + N++A + K+ + S A Sbjct: 192 PIPNAVLILFLVATGASVVLNKTIFGRYAFALGSNEEALRLSGVKVDAWKIGVYTFSGAV 251 Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296 G+AG A+ + P + + E + ++VI GG S+ I+ + Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSILGTIIGAFIMSVLTN 311 Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322 M+ + + Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYL 337 >gi|149203222|ref|ZP_01880192.1| Branched-chain amino acid ABC-type transport system, permease component [Roseovarius sp. TM1035] gi|149143055|gb|EDM31094.1| Branched-chain amino acid ABC-type transport system, permease component [Roseovarius sp. TM1035] Length = 289 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 97/299 (32%), Gaps = 26/299 (8%) Query: 43 GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102 I +M A GL+I+ G++G+++L +GAY+ L S G SI + +P + Sbjct: 12 LSMASILLMIALGLAIIYGAMGVINLAHGEFVMLGAYAAWALQSYAGFSIIVALPFVFIA 71 Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162 A G I+ ++ L I + + ++ + T Sbjct: 72 VAAVGWIIEKVIVQRLYHRPLDTILATWGIGIILQQLVRLSVGAESRFVKGPEILSGNTQ 131 Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222 +I + +V++ + A+ + +T R + N+K Sbjct: 132 -----------IGGLIMSNYRLFVIVFSLSVLAASWALMTKTEFGMKLRAVIQNRKISEC 180 Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282 FA + G+AGA I + +VI+GG+ SL Sbjct: 181 YGIEAKNIYSFTFAYGAGLAGIAGALITPLFSTIPTMGTGLV--VDAFLVVIVGGLGSLL 238 Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341 A A+ ++ L + ++ + ++I R L Sbjct: 239 GAATASVLIGEATALFSMLFNDTLGR-------------IAVLAGIIVLIRFRPRGLFP 284 >gi|146342706|ref|YP_001207754.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146195512|emb|CAL79537.1| Putative branched-chain amino acid ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 297 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 100/295 (33%), Gaps = 16/295 (5%) Query: 52 FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111 A GL+I G++G++++ +GAY V+ G G +I++ IP++ +++ G+++ Sbjct: 18 VALGLAITYGAMGVINMAHGEMVMVGAYVTVLSGLWLGTNIFVAIPLAFIVTALLGLLIE 77 Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171 ++ L L I I + L V Sbjct: 78 RVVVRKLYGRLLDTLLATWGIAILIQQAVRLEFGLSFLGIHIQGLGPGLQNVSVPDILQG 137 Query: 172 -FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230 F + + +++L L+ + + RT R I N K + + Sbjct: 138 TFRFAGSDINRYRAFIILITAILAIATWFVIYRTVAGTQVRAIIRNPKMAAACGIDVTRV 197 Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290 FA S G+AG + + S + +V++GG+ SL + I Sbjct: 198 NALTFAFGSGLAGVAGVMMSGFKTV--FPDMGTSMVVDGFLVVVMGGVGSLLGSVLSAGI 255 Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345 L + L + F + +I+++ L L+ Sbjct: 256 LGEINGLVAAATNDILARAVVFG-------------VVIAIIVLKPKGLFALKGR 297 >gi|330468455|ref|YP_004406198.1| branched-chain amino acid ABC transporter permease [Verrucosispora maris AB-18-032] gi|328811426|gb|AEB45598.1| branched-chain amino acid ABC transporter permease protein