HHsearch alignment for GI: 254780897 and conserved domain: PRK00059
>PRK00059 prsA peptidylprolyl isomerase; Provisional.
Probab=96.91 E-value=0.051 Score=34.83 Aligned_cols=140 Identities=8% Similarity=-0.026 Sum_probs=71.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE--------EEEECCCCCCCC----------C--CCCEEE-
Q ss_conf 1211115789999997643100002343322111134445--------666426534666----------5--442036-
Q gi|254780897|r 138 ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY--------TVSVDNVILEDQ----------S--KKNVQF- 196 (473)
Q Consensus 138 ~~~vtd~~Id~~i~~l~~~~~~~~~~~~~~~~gD~v~id~--------~~~~dg~~~~~~----------~--~~~~~~- 196 (473)
T Consensus 171 ~v~Vsd~Ei~~yY~~nk~~f~~~p~-~--~~~~-~Il~~~~~~A~~i~~~l~~G~dF~~lAk~~S~D~~s~~~gGdLG~~ 246 (336)
T PRK00059 171 DVKVTDKDAQKYYDENKSTFTEKPN-T--VHLS-HILVKTEEEAKKVKKRLDKGEDFAKVAKEVSQDPGSKDKGGDLGDV 246 (336)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCC-E--EEEE-EEEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 6865889999999997887337866-5--8899-8887899999999999877998899999848995310148866640
Q ss_pred EECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHH
Q ss_conf 51786656310342068878875433234444444100038730467610110024677767478875023655789999
Q gi|254780897|r 197 IVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGL 276 (473)
Q Consensus 197 ~lg~~~~~~~f~~~liG~k~Gd~~~~~~~~P~d~~~~~laGk~v~f~v~v~~I~~~~~pel~def~k~~~~~t~~elk~~ 276 (473)
T Consensus 247 ~~~~~~~~~~f~~a~f~Lk~GeiS~-pV~t~~G-----------yhIIkl~~~---~~~~----------~~~feevk~~ 301 (336)
T PRK00059 247 PYSDSNYDKEFMDAAKALKEGEISA-PVKTQFG-----------YHIIKAIKK---KEYP----------VKPFDSVKEQ 301 (336)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCC-CEEECCE-----------EEEEEEEEE---CCCC----------CCCHHHHHHH
T ss_conf 2676655668999997456888688-6066886-----------799999721---5788----------9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9988789999777776699999999864003479
Q gi|254780897|r 277 CSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP 310 (473)
Q Consensus 277 ik~~l~~~~~~~~~~~~~~~i~~~L~~~~~~~lP 310 (473)
T Consensus 302 I~~~L~~qK~~~----~~~e~~~~l~~~a~I~i~ 331 (336)
T PRK00059 302 IKKQLLQEKQSE----VFKKKIEEWKKDLKVKVY 331 (336)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHCCEEEC
T ss_conf 999999999999----999999999973780754