HHsearch alignment for GI: 254780897 and conserved domain: PRK01885
>PRK01885 greB transcription elongation factor GreB; Reviewed.
Probab=92.07 E-value=0.55 Score=26.57 Aligned_cols=79 Identities=24% Similarity=0.330 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCC---------CCCCHHHHCC
Q ss_conf 1157899999976431000023433221111344456664265346665442036517866---------5631034206
Q gi|254780897|r 142 DEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSAD---------LFSETTEILV 212 (473)
Q Consensus 142 td~~Id~~i~~l~~~~~~~~~~~~~~~~gD~v~id~~~~~dg~~~~~~~~~~~~~~lg~~~---------~~~~f~~~li 212 (473)
T Consensus 57 ~q~~le~rI~~Le~~L~~A~iid~~~~~~~~V~~Gs~V~l~~~---~g~~~~y~-iVG~~Ead~~~g~IS~~SPlg~ALl 132 (159)
T PRK01885 57 RLREIDRRVRFLTKRLENLKVVDYSPQQEGKVFFGAWVEIENE---DGEEKRFR-IVGPDEIDGRKGYISIDSPMARALL 132 (159)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEEC---CCCEEEEE-EECHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 9999999999999998733035766677881562408999866---89769999-9482442666782224698999983
Q ss_pred CCCCCCCCCCCC
Q ss_conf 887887543323
Q gi|254780897|r 213 GLKTGDQKEIER 224 (473)
Q Consensus 213 G~k~Gd~~~~~~ 224 (473)
T Consensus 133 Gkk~Gd~V~v~~ 144 (159)
T PRK01885 133 KKEVGDEVTVNT 144 (159)
T ss_pred CCCCCCEEEEEC
T ss_conf 899999899985