HHsearch alignment for GI: 254780897 and conserved domain: PRK01885

>PRK01885 greB transcription elongation factor GreB; Reviewed.
Probab=92.07  E-value=0.55  Score=26.57  Aligned_cols=79  Identities=24%  Similarity=0.330  Sum_probs=44.9

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCC---------CCCCHHHHCC
Q ss_conf             1157899999976431000023433221111344456664265346665442036517866---------5631034206
Q gi|254780897|r  142 DEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSAD---------LFSETTEILV  212 (473)
Q Consensus       142 td~~Id~~i~~l~~~~~~~~~~~~~~~~gD~v~id~~~~~dg~~~~~~~~~~~~~~lg~~~---------~~~~f~~~li  212 (473)
T Consensus        57 ~q~~le~rI~~Le~~L~~A~iid~~~~~~~~V~~Gs~V~l~~~---~g~~~~y~-iVG~~Ead~~~g~IS~~SPlg~ALl  132 (159)
T PRK01885         57 RLREIDRRVRFLTKRLENLKVVDYSPQQEGKVFFGAWVEIENE---DGEEKRFR-IVGPDEIDGRKGYISIDSPMARALL  132 (159)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEEC---CCCEEEEE-EECHHHCCCCCCCCCCCCHHHHHHH
T ss_conf             9999999999999998733035766677881562408999866---89769999-9482442666782224698999983


Q ss_pred             CCCCCCCCCCCC
Q ss_conf             887887543323
Q gi|254780897|r  213 GLKTGDQKEIER  224 (473)
Q Consensus       213 G~k~Gd~~~~~~  224 (473)
T Consensus       133 Gkk~Gd~V~v~~  144 (159)
T PRK01885        133 KKEVGDEVTVNT  144 (159)
T ss_pred             CCCCCCEEEEEC
T ss_conf             899999899985