HHsearch alignment for GI: 254780897 and conserved domain: PRK04405
>PRK04405 prsA peptidylprolyl isomerase; Provisional.
Probab=95.02 E-value=0.19 Score=30.26 Aligned_cols=93 Identities=10% Similarity=0.048 Sum_probs=62.5
Q ss_pred EEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHCCCCHHHHH
Q ss_conf 36517866563103420688788754332344444441000387304676101100246777674788750236557899
Q gi|254780897|r 195 QFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMR 274 (473)
Q Consensus 195 ~~~lg~~~~~~~f~~~liG~k~Gd~~~~~~~~P~d~~~~~laGk~v~f~v~v~~I~~~~~pel~def~k~~~~~t~~elk 274 (473)
T Consensus 193 ~f~~~~~~m~~~f~~aaf~Lk~geis~~PvkT~~GYhI-----------IK~~~--~---~~k----------~~~~~~K 246 (298)
T PRK04405 193 AFDSTDTTLDSTFKTAAFKLKNGEYTTTPVKTTYGYEV-----------IKMIK--H---PAK----------GKFTDHK 246 (298)
T ss_pred EECCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCEEE-----------EEEEC--C---CCC----------CCHHHHH
T ss_conf 04079986176999999748899816884521673399-----------99834--5---777----------9889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 99998878999977777669999999986400347999999
Q gi|254780897|r 275 GLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVE 315 (473)
Q Consensus 275 ~~ik~~l~~~~~~~~~~~~~~~i~~~L~~~~~~~lPe~lv~ 315 (473)
T Consensus 247 ~~l~~~i~~~k~~--D~~~~~~vi~k~lk~anVkikD~~lk 285 (298)
T PRK04405 247 KELTKQIYAKWAS--DSTVMQNVISKVLKKANVSIKDKDLK 285 (298)
T ss_pred HHHHHHHHHHHHH--CHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf 9999999998730--87999999999999779871568999