HHsearch alignment for GI: 254780897 and conserved domain: pfam09312
>pfam09312 SurA_N SurA N-terminal domain. This domain is found at the N-terminus of the chaperone SurA. It is a helical domain of unknown function. The C-terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment.
Probab=97.09 E-value=0.034 Score=36.18 Aligned_cols=100 Identities=11% Similarity=0.121 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 79999999977678999999753486400110001345677899999999999999999864387428999999999999
Q gi|254780897|r 309 VPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL 388 (473)
Q Consensus 309 lPe~lv~~e~~~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~Aek~vk~~lil~~Ia~~e~I~vs~~Ei~~~i~~~~ 388 (473)
T Consensus 13 It~~el~~~~~~----~~~~~~~~~~~~~~--------~~~l~~~vL~~LI~~~L~~q~A~~~gi~vsd~evd~~i~~ia 80 (118)
T pfam09312 13 ILQSELDRRVKT----VKRQLAKQGTQLPP--------DAVLRRQVLERLILERIQLQMAERTGIRVDDEQLNQAIARIA 80 (118)
T ss_pred CCHHHHHHHHHH----HHHHHHHCCCCCCC--------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 489999999999----99999865899992--------899999999999999999999998599998999999999999
Q ss_pred HHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 86399989999998709998999999999999
Q gi|254780897|r 389 GRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~i~~~ile~K 420 (473)
T Consensus 81 ~~n~~s~~~~~~~L~~~G~~~~~~r~~ir~qi 112 (118)
T pfam09312 81 QQNNMTLDQLRAALAADGLSYDEFREQIRKEM 112 (118)
T ss_pred HHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 88598999999999984999999999999999