HHsearch alignment of GI: 254780897 and MMDB domain: 1t11_A_121-151_258-392

>1t11_A (A:121-151,A:258-392) Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae}
Probab=99.65  E-value=3.3e-16  Score=148.09  Aligned_cols=129  Identities=15%  Similarity=0.294  Sum_probs=121.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHH
Q ss_conf             23655789999998878999977777669999999986400347999999997767899999975348640011000134
Q gi|254780897|r  266 GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE  345 (473)
Q Consensus       266 ~~~t~~elk~~ik~~l~~~~~~~~~~~~~~~i~~~L~~~~~~~lPe~lv~~e~~~~~~~~~~~l~~~~~~~~~~~~~~e~  345 (473)
                      |++|+++||+.||++|..++.......++++|+++|++.++|+||+++|+++++++++++..++..+|.+.+      +.
T Consensus        36 ~~~TleeLk~~ire~le~~~~~~~~~~~~~~ild~L~e~~~~dlPeslv~~e~~~l~~~~~~~l~~~g~~~e------e~  109 (166)
T 1t11_A           36 AEGGVDALKAEVRKNMERELKQAIKARIKEQAIEGLVKENEIQVPSALIDQEINVLRQQAAQRFGGNVEAAA------QL  109 (166)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTBCSCCCEEECHHHHHHHHHHHHHHHHHHSSCSHHHHT------TS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH------HH
T ss_conf             545578999999999999999999988887899999974366798078999999999999988277834444------66


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             5677899999999999999999864387428999999999999863999899999
Q gi|254780897|r  346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLD  400 (473)
Q Consensus       346 ~~~~~~~~Aek~vk~~lil~~Ia~~e~I~vs~~Ei~~~i~~~~~~~~~~~~~~~~  400 (473)
                      +++.++..|+++||++||+++||+.+||+||++||..++..++..||.+++.+..
T Consensus       110 ~~ee~~~~Aek~vK~~lil~~IA~~e~I~vseeEi~~~i~~~A~~yg~~~e~ik~  164 (166)
T 1t11_A          110 PRELFEEQAKRRVVVGLLLGEVIRTHELKADEEKVKALITEMATAYEDPSEVVSY  164 (166)
T ss_dssp             CGGGTHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHCC---------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             7889999999999999999999999789889999999999999846998999986