HHsearch results for GI: 254780897 and protein with PDBid: 3cgm_A
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=98.63 E-value=3e-08 Score=83.04 Aligned_cols=85 Identities=21% Similarity=0.337 Sum_probs=71.1
Q ss_pred CCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC-----------
Q ss_conf 322111134445666426534666544203651786656310342068878875433234444444100-----------
Q gi|254780897|r 166 ESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD----------- 234 (473)
Q Consensus 166 ~~~~gD~v~id~~~~~dg~~~~~~~~~~~~~~lg~~~~~~~f~~~liG~k~Gd~~~~~~~~P~d~~~~~----------- 234 (473)
.++.|++|+|+|.++.+|+.++.. .+.|.+|++.++|+|+++|+||++|+++++++...+.|...+
T Consensus 2 ~i~~~~~V~i~Y~l~~dG~v~ds~---P~~f~~G~g~~~pglE~aL~Gm~~Ge~~~v~l~pe~AfG~~d~~~v~~~~~~~ 78 (158)
T 3cgm_A 2 KVGQDKVVTIRYTLQVEGEVLDQG---ELSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSA 78 (158)
T ss_dssp BCCTTEEEEEEEEEEETTEEEEEE---EEEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCGGGEEEEEGGG
T ss_pred EECCCCEEEEEEEEEECCEEEECC---CEEEEECCCCCCHHHHHHHCCCCCCCCCEEEECHHHHCCCCCCCCCEECCHHH
T ss_conf 407999999999999899997669---87999659871088999755785885323874767816544633322125110
Q ss_pred ------------------------------------------CCCCCEEEEEEHHHHHCCC
Q ss_conf ------------------------------------------0387304676101100246
Q gi|254780897|r 235 ------------------------------------------LAGKKVRLNFSIKEVFSPL 253 (473)
Q Consensus 235 ------------------------------------------laGk~v~f~v~v~~I~~~~ 253 (473)
|||+++.|+|+|.+|....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~g~~~~~~V~~i~~~~v~vD~NHPLAGk~l~fev~i~~Vr~at 139 (158)
T 3cgm_A 79 FPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAGKDLDFQVEVVKVREAT 139 (158)
T ss_dssp SCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEEEECC
T ss_pred CCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCEEEEECCCHHCCCEEEEEEEEEEEECCC
T ss_conf 4433465666189861477762789999980888997578520498069999999984599