PSIBLAST alignment of GI: 254780897 and protein with PDB id: 1w26
>gi|55670527|pdb|1W26|A Chain A, Trigger Factor In Complex With The Ribosome Forms A Molecular Cradle For Nascent Proteins Length = 432
>gi|55670528|pdb|1W26|B Chain B, Trigger Factor In Complex With The Ribosome Forms A Molecular Cradle For Nascent Proteins Length = 432
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 89/447 (19%), Positives = 200/447 (44%), Gaps = 18/447 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
QV + ++GL R + + I ++ + + + ++ K I GFR GKVP + + YG S
Sbjct: 2 QVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPXNIVAQRYGAS 61
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + + ++ + + K A P+ G + D + +++
Sbjct: 62 VRQDVLGDLXSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEVY 112
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T SV
Sbjct: 113 PEVELQGLEAIEVEKPIVEVTDADVDGXLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSV 172
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D E + G + + G K G++ I+ FPE++ ++L GK +
Sbjct: 173 DGEEFEGGKASDFVLAXGQGRXIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAK 232
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++K+V + + R G E +R + ++ + +R +VK Q ++
Sbjct: 233 FAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNXERELKSAIRNRVKSQAIE 292
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ DVP +L+++E + + ++ N E + + AKRRV+
Sbjct: 293 GLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRVV 346
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++LG + N ++ EE ++ + + + K++++ + K R E+
Sbjct: 347 VGLLLGEVIRTNELKADEERVKGLIEEXASAY-EDPKEVIEFYSKNKELXDNXRNVALEE 405
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ ++ +L ++ +++ TF++L + +
Sbjct: 406 QAVEAVLAKAKVTEKETTFNELXNQQA 432